TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2643622.2.1
(1067 letters)
Database: Hordeum_nucl_with_EST.fasta
312,970 sequences; 175,134,539 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BG415142.2|BG415142 HVSMEk0005E23f Hordeum vulgare testa... 387 e-107
gb|BI960513.1|BI960513 HVSMEn0024N22f Hordeum vulgare rachi... 382 e-105
gb|BF253422.2|BF253422 HVSMEf0001G02f Hordeum vulgare seedl... 379 e-104
gb|BI776301.2|BI776301 EBem04_SQ001_H10_R embryo, 12 DPA, n... 344 4e-094
gb|AV931728.1|AV931728 AV931728 K. Sato unpublished cDNA li... 314 4e-085
gb|AL504160.1|AL504160 AL504160 Hordeum vulgare Barke roots... 278 2e-080
gb|BQ664275.1|BQ664275 HV02K08u HV Hordeum vulgare subsp. v... 271 5e-072
gb|CB858927.1|CB858927 HI08L23w HI Hordeum vulgare subsp. v... 121 7e-070
gb|AV836678.1|AV836678 AV836678 K. Sato unpublished cDNA li... 250 9e-068
gb|BI958347.1|BI958347 HVSMEn0014I13f Hordeum vulgare rachi... 229 2e-059
gb|AV915951.1|AV915951 AV915951 K. Sato unpublished cDNA li... 204 7e-052
gb|BF254550.2|BF254550 HVSMEf0004F12f Hordeum vulgare seedl... 185 4e-046
gb|AV917230.1|AV917230 AV917230 K. Sato unpublished cDNA li... 182 2e-045
gb|AV919454.1|AV919454 AV919454 K. Sato unpublished cDNA li... 181 8e-045
gb|BQ471267.1|BQ471267 HV01P03T HV Hordeum vulgare subsp. v... 180 1e-044
gb|BJ464883.1|BJ464883 BJ464883 K. Sato unpublished cDNA li... 179 3e-044
gb|BJ466813.1|BJ466813 BJ466813 K. Sato unpublished cDNA li... 178 4e-044
gb|AV936726.1|AV936726 AV936726 K. Sato unpublished cDNA li... 96 7e-044
gb|AJ434580.1|AJ434580 AJ434580 S00002 Hordeum vulgare subs... 176 2e-043
gb|BM816874.1|BM816874 HB105E09_SK.ab1 HB Hordeum vulgare s... 85 5e-043
gb|BJ546119.1|BJ546119 BJ546119 K. Sato unpublished cDNA li... 92 2e-042
gb|BF259778.3|BF259778 HVSMEf0020D20f Hordeum vulgare seedl... 171 8e-042
gb|BJ546669.1|BJ546669 BJ546669 K. Sato unpublished cDNA li... 171 8e-042
gb|AV930421.1|AV930421 AV930421 K. Sato unpublished cDNA li... 96 1e-041
gb|AV936356.1|AV936356 AV936356 K. Sato unpublished cDNA li... 96 1e-041
gb|BF628635.2|BF628635 HVSMEb0006N15f Hordeum vulgare seedl... 92 2e-041
gb|BJ548006.1|BJ548006 BJ548006 K. Sato unpublished cDNA li... 96 3e-041
gb|AV936516.1|AV936516 AV936516 K. Sato unpublished cDNA li... 96 5e-041
gb|BI960706.1|BI960706 HVSMEn0001B07f Hordeum vulgare rachi... 167 8e-041
gb|AV936349.1|AV936349 AV936349 K. Sato unpublished cDNA li... 96 1e-040
gb|BJ548998.1|BJ548998 BJ548998 K. Sato unpublished cDNA li... 96 1e-040
gb|CA030582.1|CA030582 HX07H18r HX Hordeum vulgare subsp. v... 115 1e-040
gb|AV921112.1|AV921112 AV921112 K. Sato unpublished cDNA li... 90 2e-040
gb|BJ545191.1|BJ545191 BJ545191 K. Sato unpublished cDNA li... 166 3e-040
gb|BJ466861.1|BJ466861 BJ466861 K. Sato unpublished cDNA li... 92 6e-040
gb|BE215637.1|BE215637 HV_CEb0007H18f Hordeum vulgare seedl... 163 1e-039
gb|BI958239.1|BI958239 HVSMEn0014A11f Hordeum vulgare rachi... 161 6e-039
gb|AV921067.1|AV921067 AV921067 K. Sato unpublished cDNA li... 160 1e-038
gb|AV919647.1|AV919647 AV919647 K. Sato unpublished cDNA li... 92 5e-038
gb|BE519743.1|BE519743 HV_CEb0021A21f Hordeum vulgare seedl... 78 5e-038
gb|BU999462.1|BU999462 HI14J11r HI Hordeum vulgare subsp. v... 114 7e-038
gb|BJ548975.1|BJ548975 BJ548975 K. Sato unpublished cDNA li... 96 1e-037
gb|BJ547960.1|BJ547960 BJ547960 K. Sato unpublished cDNA li... 96 1e-037
gb|BJ548386.1|BJ548386 BJ548386 K. Sato unpublished cDNA li... 96 1e-037
gb|AV935198.1|AV935198 AV935198 K. Sato unpublished cDNA li... 96 1e-037
gb|BJ544646.1|BJ544646 BJ544646 K. Sato unpublished cDNA li... 92 1e-037
gb|BI956493.1|BI956493 HVSMEn0003M04f Hordeum vulgare rachi... 156 2e-037
gb|BF629412.3|BF629412 HVSMEb0012D18f Hordeum vulgare seedl... 155 5e-037
gb|AV913934.1|AV913934 AV913934 K. Sato unpublished cDNA li... 92 8e-037
gb|AV916927.1|AV916927 AV916927 K. Sato unpublished cDNA li... 92 3e-036
gb|AV922397.1|AV922397 AV922397 K. Sato unpublished cDNA li... 151 5e-036
gb|BJ466913.1|BJ466913 BJ466913 K. Sato unpublished cDNA li... 151 5e-036
gb|BJ463386.1|BJ463386 BJ463386 K. Sato unpublished cDNA li... 151 7e-036
gb|BJ545019.1|BJ545019 BJ545019 K. Sato unpublished cDNA li... 92 7e-036
gb|BJ546501.1|BJ546501 BJ546501 K. Sato unpublished cDNA li... 92 7e-036
gb|BI955765.1|BI955765 HVSMEm0024G17f Hordeum vulgare green... 112 9e-035
gb|AV915997.1|AV915997 AV915997 K. Sato unpublished cDNA li... 90 3e-034
gb|BF627303.3|BF627303 HVSMEb0004I01f Hordeum vulgare seedl... 145 3e-034
gb|BI957225.1|BI957225 HVSMEn0008D16f Hordeum vulgare rachi... 130 6e-034
gb|AV917809.1|AV917809 AV917809 K. Sato unpublished cDNA li... 144 6e-034
gb|AV919113.1|AV919113 AV919113 K. Sato unpublished cDNA li... 144 6e-034
gb|AV919240.1|AV919240 AV919240 K. Sato unpublished cDNA li... 144 6e-034
gb|AV922497.1|AV922497 AV922497 K. Sato unpublished cDNA li... 144 6e-034
gb|BU968861.1|BU968861 HB08M23r BC Hordeum vulgare subsp. v... 91 8e-034
gb|AV916579.1|AV916579 AV916579 K. Sato unpublished cDNA li... 61 2e-033
gb|BJ549009.1|BJ549009 BJ549009 K. Sato unpublished cDNA li... 81 3e-033
gb|BJ465003.1|BJ465003 BJ465003 K. Sato unpublished cDNA li... 86 4e-033
gb|AV918301.1|AV918301 AV918301 K. Sato unpublished cDNA li... 92 4e-033
gb|AV918176.1|AV918176 AV918176 K. Sato unpublished cDNA li... 92 4e-033
gb|AV922405.1|AV922405 AV922405 K. Sato unpublished cDNA li... 92 4e-033
gb|CA005397.1|CA005397 HU10K20u HU Hordeum vulgare subsp. v... 89 9e-033
gb|BF624750.2|BF624750 HVSMEa0017K07f Hordeum vulgare seedl... 134 2e-032
gb|BJ475646.1|BJ475646 BJ475646 K. Sato unpublished cDNA li... 102 3e-032
gb|BE519761.3|BE519761 HV_CEb0021C04f Hordeum vulgare seedl... 115 4e-032
gb|AY989887.1| Hordeum vulgare subsp. vulgare cytochrome P4... 68 5e-032
gb|AV927306.1|AV927306 AV927306 K. Sato unpublished cDNA li... 82 9e-032
gb|AU252315.1|AU252315 AU252315 salt-stressed barley root c... 137 1e-031
gb|AV912967.1|AV912967 AV912967 K. Sato unpublished cDNA li... 95 2e-031
gb|BG416486.2|BG416486 HVSMEk0012I14f Hordeum vulgare testa... 136 2e-031
gb|BF622624.2|BF622624 HVSMEa0007G07f Hordeum vulgare seedl... 86 3e-031
gb|BJ453643.1|BJ453643 BJ453643 K. Sato unpublished cDNA li... 83 4e-031
gb|BQ664209.1|BQ664209 HV02F12u HV Hordeum vulgare subsp. v... 135 5e-031
gb|BF627063.2|BF627063 HVSMEb0002G10f Hordeum vulgare seedl... 107 8e-031
gb|BJ452936.1|BJ452936 BJ452936 K. Sato unpublished cDNA li... 81 8e-031
emb|AJ495774.1|HVU495774 Hordeum vulgare partial mRNA for p... 67 2e-030
gb|AV920965.1|AV920965 AV920965 K. Sato unpublished cDNA li... 78 2e-030
gb|CA019349.1|CA019349 HV11L11r HV Hordeum vulgare subsp. v... 132 3e-030
gb|AV917596.1|AV917596 AV917596 K. Sato unpublished cDNA li... 84 1e-029
gb|CB880227.1|CB880227 HM05O04w HM Hordeum vulgare subsp. v... 80 5e-029
gb|BF628382.2|BF628382 HVSMEb0003O04f Hordeum vulgare seedl... 127 8e-029
gb|BF260290.3|BF260290 HVSMEf0021J18f Hordeum vulgare seedl... 127 8e-029
gb|AV914567.1|AV914567 AV914567 K. Sato unpublished cDNA li... 92 8e-029
gb|AV917240.1|AV917240 AV917240 K. Sato unpublished cDNA li... 127 1e-028
gb|AV922407.1|AV922407 AV922407 K. Sato unpublished cDNA li... 127 1e-028
gb|CA013705.1|CA013705 HT09E03r HT Hordeum vulgare subsp. v... 81 2e-028
gb|BG301188.1|BG301188 HVSMEb0019N18f Hordeum vulgare seedl... 66 2e-028
gb|BJ464184.1|BJ464184 BJ464184 K. Sato unpublished cDNA li... 92 2e-028
gb|AV918673.1|AV918673 AV918673 K. Sato unpublished cDNA li... 76 3e-028
gb|AV913374.1|AV913374 AV913374 K. Sato unpublished cDNA li... 76 3e-028
gb|AU252316.1|AU252316 AU252316 salt-stressed barley root c... 74 5e-028
gb|BM817083.1|BM817083 HC01F04_T3.ab1 HC Hordeum vulgare su... 125 5e-028
gb|AV934105.1|AV934105 AV934105 K. Sato unpublished cDNA li... 96 6e-028
gb|AV917724.1|AV917724 AV917724 K. Sato unpublished cDNA li... 124 7e-028
gb|CA020031.1|CA020031 HV14C06r HV Hordeum vulgare subsp. v... 119 2e-027
gb|BF631513.2|BF631513 HVSMEb0016D19f Hordeum vulgare seedl... 122 3e-027
gb|BE216646.1|BE216646 HV_CEb0011B08f Hordeum vulgare seedl... 62 6e-027
gb|CA018612.1|CA018612 HV09C09r HV Hordeum vulgare subsp. v... 74 6e-027
gb|BQ767330.1|BQ767330 EBro08_SQ008_H18_R root, 3 week, dro... 121 6e-027
gb|AV934098.1|AV934098 AV934098 K. Sato unpublished cDNA li... 82 8e-027
gb|BM371202.2|BM371202 EBro04_SQ003_N08_R root, 3 week, sal... 98 5e-026
gb|BQ758724.1|BQ758724 EBma07_SQ002_J15_R maternal, 21 DPA,... 83 7e-026
gb|BF624213.1|BF624213 HVSMEa0012L22f Hordeum vulgare seedl... 117 1e-025
gb|BI779253.2|BI779253 EBro01_SQ003_H11_R root, 3 week, hyd... 117 1e-025
gb|BJ466231.1|BJ466231 BJ466231 K. Sato unpublished cDNA li... 91 2e-025
gb|CA009374.1|CA009374 HU13P05r HU Hordeum vulgare subsp. v... 93 3e-025
gb|AV913914.1|AV913914 AV913914 K. Sato unpublished cDNA li... 115 5e-025
gb|BQ470705.1|BQ470705 HX03M12r HX Hordeum vulgare subsp. v... 115 5e-025
gb|AV918446.1|AV918446 AV918446 K. Sato unpublished cDNA li... 82 6e-025
gb|AV921548.1|AV921548 AV921548 K. Sato unpublished cDNA li... 70 6e-025
gb|AL500947.1|AL500947 AL500947 Hordeum vulgare Barke roots... 114 8e-025
gb|BM101180.2|BM101180 EBpi01_SQ003_C01_R pistil, 1 DPA, no... 114 8e-025
gb|CA025677.1|CA025677 HZ52M20r HZ Hordeum vulgare subsp. v... 82 2e-024
gb|CA025894.1|CA025894 HZ53H05r HZ Hordeum vulgare subsp. v... 113 2e-024
gb|BI958715.1|BI958715 HVSMEn0016F08f Hordeum vulgare rachi... 55 2e-024
gb|AU252319.1|AU252319 AU252319 salt-stressed barley root c... 107 3e-024
gb|BI952928.1|BI952928 HVSMEm0008H17f Hordeum vulgare green... 75 3e-024
gb|CA009631.1|CA009631 HU14K18r HU Hordeum vulgare subsp. v... 74 5e-024
gb|AV836496.1|AV836496 AV836496 K. Sato unpublished cDNA li... 111 5e-024
gb|BI948978.1|BI948978 HVSMEl0011O14f Hordeum vulgare spike... 111 5e-024
gb|CA028447.1|CA028447 HZ61P23r HZ Hordeum vulgare subsp. v... 111 7e-024
gb|BE558465.1|BE558465 HV_CEb0017M13f Hordeum vulgare seedl... 98 1e-023
gb|CA016903.1|CA016903 HV05M12u HV Hordeum vulgare subsp. v... 98 1e-023
gb|AV918924.1|AV918924 AV918924 K. Sato unpublished cDNA li... 110 2e-023
gb|AV929028.1|AV929028 AV929028 K. Sato unpublished cDNA li... 110 2e-023
gb|BJ465805.1|BJ465805 BJ465805 K. Sato unpublished cDNA li... 110 2e-023
gb|BQ664118.1|BQ664118 HV01P03w HV Hordeum vulgare subsp. v... 110 2e-023
gb|BE195199.3|BE195199 HVSMEh0088J02f Hordeum vulgare 5-45 ... 67 2e-023
gb|CV063618.1|CV063618 BNEL91c9 Barley EST endosperm librar... 80 2e-023
gb|BJ463196.1|BJ463196 BJ463196 K. Sato unpublished cDNA li... 76 3e-023
gb|BJ460485.1|BJ460485 BJ460485 K. Sato unpublished cDNA li... 70 5e-023
gb|BG365432.1|BG365432 HVSMEi0002K17f Hordeum vulgare 20 DA... 91 6e-023
gb|AV928038.1|AV928038 AV928038 K. Sato unpublished cDNA li... 80 2e-022
gb|AU252324.1|AU252324 AU252324 salt-stressed barley root c... 59 4e-022
gb|AL504406.1|AL504406 AL504406 Hordeum vulgare Barke roots... 105 4e-022
gb|AV918105.1|AV918105 AV918105 K. Sato unpublished cDNA li... 59 7e-022
gb|BJ547149.1|BJ547149 BJ547149 K. Sato unpublished cDNA li... 75 1e-021
gb|AY551434.1| Hordeum vulgare subsp. vulgare ent-kaurene o... 84 5e-021
gb|BF253649.2|BF253649 HVSMEf0001L18f Hordeum vulgare seedl... 101 5e-021
>gb|BG415142.2|BG415142 HVSMEk0005E23f Hordeum vulgare testa/pericarp EST library
HVcDNA0013 (normal) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEk0005E23f, mRNA sequence
Length = 922
Score = 387 bits (840), Expect = e-107
Identities = 163/210 (77%), Positives = 176/210 (83%)
Frame = -3 / +3
Query: 882 HFVDALFTLRDKYDLSDDTVIGLLWDMITAGTDTTVISV*WAMAELLRNPRVQEKLQEEL 703
HFVDALFTLR+KYDLSDDTV GLLWDMITAG DTTVISV WAMAEL+RNPRVQ+KLQEEL
Sbjct: 3 HFVDALFTLREKYDLSDDTVFGLLWDMITAGMDTTVISVEWAMAELVRNPRVQQKLQEEL 182
Query: 702 DRVVGRDRVLSETDFPNLPYLQAVVKESLRLHPPTPLMLPHRASASVKIAGYDIPKGXXX 523
D VVGRDRV++ETDF NLPYL VVKESLRLHPPTPLMLPH+ASASVK+ GY+IPKG
Sbjct: 183 DNVVGRDRVMAETDFQNLPYLMDVVKESLRLHPPTPLMLPHKASASVKVGGYNIPKGANV 362
Query: 522 XXXXXXXARDPEVWDSPLEFRPERFLRENIDIKGADFRVLPFGAGRRVCPGAQLGINLVA 343
ARDP+VW SPLEFRPER L E+IDIKG DFRVLPFGAGRRVCPGA GINLVA
Sbjct: 363 MVNVWAVARDPKVWTSPLEFRPERSLEESIDIKGIDFRVLPFGAGRRVCPGAHFGINLVA 542
Query: 342 SMIGHMLHHFTWTLPSGTCPEDVSMMESPG 253
SMIG MLH T +LP P+D +M ESPG
Sbjct: 543 SMIGPMLHPLTRSLPESPRPKDFNMRESPG 632
Score = 171 bits (368), Expect(2) = 5e-051
Identities = 81/138 (58%), Positives = 86/138 (62%)
Frame = +2 / -1
Query: 254 PGDSIMLTSSGQVPLGSVHVKWCSMWPIMDATRLIPSCAPGHTRRPAPNGSTRKSAPLMS 433
PGDS+ML S G G V CSM PI++ATRLIP APGHT RPAP GST KS PLMS
Sbjct: 631 PGDSLMLKSFGLGLSGKDLVNGCSMGPIIEATRLIPK*APGHTLRPAPKGSTLKSMPLMS 452
Query: 434 MFXXXXXXXXXXXXLSHTSGSRXXXXXXXXXXXXXGMS*PAILTLALALWGSISGVGGCR 613
M L HT GSR GM *P LTLALALWGS+SGVGGCR
Sbjct: 451 MLSSRERSGLNSSGLVHTLGSRATAHTFTMTLAPLGML*PPTLTLALALWGSMSGVGGCR 272
Query: 614 RRDSLTTACR*GRFGKSV 667
RRDSLTT+ R GRF KSV
Sbjct: 271 RRDSLTTSIRYGRFWKSV 218
Score = 89.5 bits (189), Expect(3) = 1e-024
Identities = 40/71 (56%), Positives = 43/71 (60%)
Frame = +1 / -3
Query: 301 QRPREVVQHVADHGRHEVDPELRAGAHPAAGAERQHAEVGALDVDVXXXXXXXXXXXXAV 480
QRPR+ VQH ADH EVD E+ AGAHP A AE QH EV ALDVD
Sbjct: 584 QRPRQWVQHGADH*GDEVDSEMSAGAHPPARAEGQHPEVNALDVDALLQGALRPELQRTG 405
Query: 481 PHLGVARHRPH 513
PHLGV+ HRPH
Sbjct: 404 PHLGVSGHRPH 372
Score = 50.6 bits (104), Expect(2) = 5e-051
Identities = 22/44 (50%), Positives = 26/44 (59%)
Frame = +2 / -1
Query: 752 AIAHYTEITVVSVPAVIMSQRRPMTXXXXXXXXXXXXXXASTKC 883
A+AH T++TVVS+PAVIMS R P T ASTKC
Sbjct: 133 AMAHSTDMTVVSIPAVIMSHRSPKTVSSLRSYFSLRVNSASTKC 2
Score = 34.5 bits (69), Expect(3) = 1e-024
Identities = 12/16 (75%), Positives = 15/16 (93%)
Frame = +1 / -3
Query: 586 EHQRRRRVQAQGLLDD 633
+H+RRRRVQ +GLLDD
Sbjct: 299 QHERRRRVQTEGLLDD 252
Score = 32.2 bits (64), Expect(3) = 1e-024
Identities = 12/29 (41%), Positives = 22/29 (75%)
Frame = +1 / -3
Query: 796 GDHVPEEAYDGVVAEVVLVPESEERVDEV 882
GDHVP ++ + V+ +V+L+ ESE+ + +V
Sbjct: 89 GDHVP*KSENCVITKVILLSESEQCIHKV 3
>gb|BI960513.1|BI960513 HVSMEn0024N22f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0024N22f, mRNA sequence
Length = 653
Score = 382 bits (828), Expect = e-105
Identities = 155/195 (79%), Positives = 172/195 (88%)
Frame = -3 / +2
Query: 741 RNPRVQEKLQEELDRVVGRDRVLSETDFPNLPYLQAVVKESLRLHPPTPLMLPHRASASV 562
RNP VQ+KLQEELD VVGRDRV++ETDF NLPYL AVVKESLRLHPPTPLMLPH+ASASV
Sbjct: 2 RNPXVQQKLQEELDNVVGRDRVMAETDFQNLPYLMAVVKESLRLHPPTPLMLPHKASASV 181
Query: 561 KIAGYDIPKGXXXXXXXXXXARDPEVWDSPLEFRPERFLRENIDIKGADFRVLPFGAGRR 382
K+ GY+IPKG ARDP+VW SPLEFRPERFL E+IDIKG+DFRVLPFGAGRR
Sbjct: 182 KVGGYNIPKGANVMVNVWAVARDPKVWSSPLEFRPERFLEESIDIKGSDFRVLPFGAGRR 361
Query: 381 VCPGAQLGINLVASMIGHMLHHFTWTLPSGTCPEDVSMMESPGLVTFMATPLQAVATPRL 202
VCPGAQLGINLVASMIGHMLHHF W+LP GT PED+SMMESPGLVTFM TPLQA+ATPRL
Sbjct: 362 VCPGAQLGINLVASMIGHMLHHFKWSLPEGTRPEDISMMESPGLVTFMGTPLQAIATPRL 541
Query: 201 DKEELYRRVPSDV*A 157
+K ELY++VP ++*A
Sbjct: 542 EKXELYKKVPVEI*A 586
Score = 255 bits (551), Expect = 3e-067
Identities = 115/170 (67%), Positives = 118/170 (69%)
Frame = +2 / -3
Query: 158 AHTSEGTRLYSSSLSRRGVATACSGVAMKVTSPGDSIMLTSSGQVPLGSVHVKWCSMWPI 337
A S GT LYSSS SRRGVA ACSGV MKVTSPGDSIML SSG VP G H+KWCSM PI
Sbjct: 585 AQISTGTFLYSSSFSRRGVAMACSGVPMKVTSPGDSIMLMSSGLVPSGRDHLKWCSMCPI 406
Query: 338 MDATRLIPSCAPGHTRRPAPNGSTRKSAPLMSMFXXXXXXXXXXXXLSHTSGSRXXXXXX 517
M+ATRLIPSCAPGHT RPAP GST KS PLMSM L HT GSR
Sbjct: 405 MEATRLIPSCAPGHTLRPAPKGSTLKSLPLMSMLSSRKRSGLNSSGLLHTLGSRATAHTF 226
Query: 518 XXXXXXXGMS*PAILTLALALWGSISGVGGCRRRDSLTTACR*GRFGKSV 667
GM *P TLALALWGS+SGVGGCRRRDSLTTA R GRF KSV
Sbjct: 225 TMTLAPLGML*PPTFTLALALWGSMSGVGGCRRRDSLTTAIRYGRFWKSV 76
Score = 150 bits (322), Expect(2) = 6e-040
Identities = 68/118 (57%), Positives = 72/118 (61%)
Frame = +1 / -2
Query: 160 SHVRRDTPVQLLLVQARRGDGLQRRGHEGDEXXXXXXXXXXXXXXXRQRPREVVQHVADH 339
S + RD VQL L+QARRGDGLQRR HEGDE RQRP E+VQHV DH
Sbjct: 583 SDLNRDLLVQLXLLQARRGDGLQRRAHEGDEPGGLHHANVLRPGAFRQRPLEMVQHVPDH 404
Query: 340 GRHEVDPELRAGAHPAAGAERQHAEVGALDVDVXXXXXXXXXXXXAVPHLGVARHRPH 513
G EVDPELRAGAHP A AE QH EV ALDVD PHLGV+ HRPH
Sbjct: 403 GGDEVDPELRAGAHPPARAEGQHPEVTALDVDALLQEALRPELQRTAPHLGVSGHRPH 230
Score = 93.6 bits (198), Expect(4) = 8e-025
Identities = 41/82 (50%), Positives = 41/82 (50%)
Frame = -1 / +3
Query: 512 CGRWRATPRCXXXXXXXXXXXXXXXXXXXXXXXXACCRSAPAAGCAPARSSGSTSWRP*S 333
CGRW TPRC CC SA A GCAPARSSGSTS P*S
Sbjct: 231 CGRWPETPRCGAVRWSSGRSASWRRASTSRAVTSGCCPSARAGGCAPARSSGSTSSPP*S 410
Query: 332 ATCCTTSRGRCRAGPAPRT*A* 267
TCCT S G CR P RT A*
Sbjct: 411 GTCCTISSGLCRKAPGRRTLA* 476
Score = 34.5 bits (69), Expect(2) = 6e-040
Identities = 12/16 (75%), Positives = 15/16 (93%)
Frame = +1 / -2
Query: 586 EHQRRRRVQAQGLLDD 633
+H+RRRRVQ +GLLDD
Sbjct: 157 QHERRRRVQTEGLLDD 110
Score = 29.5 bits (58), Expect(4) = 8e-025
Identities = 11/14 (78%), Positives = 12/14 (85%)
Frame = -2 / +1
Query: 661 LPEPALPAGSRQGV 620
LPEPA+P G RQGV
Sbjct: 82 LPEPAVPDGRRQGV 123
Score = 23.5 bits (45), Expect(4) = 8e-025
Identities = 8/11 (72%), Positives = 8/11 (72%)
Frame = -1 / +3
Query: 620 PCACTRRRR*C 588
P CTRRRR C
Sbjct: 123 PSVCTRRRRSC 155
Score = 22.1 bits (42), Expect(4) = 8e-025
Identities = 7/10 (70%), Positives = 8/10 (80%)
Frame = -1 / +3
Query: 734 PGCRRSCRRS 705
P C RSC+RS
Sbjct: 9 PRCSRSCKRS 38
>gb|BF253422.2|BF253422 HVSMEf0001G02f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEf0001G02f, mRNA sequence
Length = 617
Score = 379 bits (821), Expect = e-104
Identities = 157/205 (76%), Positives = 174/205 (84%)
Frame = -3 / +1
Query: 1005 LRWLAPDDEQAFKAHGERRDRLTVKIMEEHARALKQRGAQQHFVDALFTLRDKYDLSDDT 826
L WL P +E+ +K H ERRDRLT I+EEHA ALK+ GA+QHFVDALFTLR+KYDLSDDT
Sbjct: 1 LIWLCPLNEELYKTHNERRDRLTNNIIEEHAHALKESGAKQHFVDALFTLREKYDLSDDT 180
Query: 825 VIGLLWDMITAGTDTTVISV*WAMAELLRNPRVQEKLQEELDRVVGRDRVLSETDFPNLP 646
V GLLWDMITAG DTTVISV WAMAEL+RNPRVQ+KLQEELD VVGRDRV++ETDF NLP
Sbjct: 181 VFGLLWDMITAGMDTTVISVEWAMAELVRNPRVQQKLQEELDNVVGRDRVMAETDFQNLP 360
Query: 645 YLQAVVKESLRLHPPTPLMLPHRASASVKIAGYDIPKGXXXXXXXXXXARDPEVWDSPLE 466
YL AVVKESLRLHPPTPLMLPH+ASASVK+ GY+IPKG ARDP VW SPLE
Sbjct: 361 YLMAVVKESLRLHPPTPLMLPHKASASVKVGGYNIPKGANVMVNVWAVARDPNVWSSPLE 540
Query: 465 FRPERFLRENIDIKGADFRVLPFGA 391
F+PERFL E+IDIKG+DFRVLPF A
Sbjct: 541 FKPERFLEESIDIKGSDFRVLPFXA 615
Score = 113 bits (241), Expect(2) = 8e-047
Identities = 54/93 (58%), Positives = 55/93 (59%)
Frame = +2 / -1
Query: 389 PAPNGSTRKSAPLMSMFXXXXXXXXXXXXLSHTSGSRXXXXXXXXXXXXXGMS*PAILTL 568
PA GST KS PLMSM L HT GSR GM *P LTL
Sbjct: 617 PAXKGSTLKSLPLMSMLSSRKRSGLNSSGLLHTLGSRATAHTFTMTLAPLGML*PPTLTL 438
Query: 569 ALALWGSISGVGGCRRRDSLTTACR*GRFGKSV 667
ALALWGS+SGVGGCRRRDSLTTA R GRF KSV
Sbjct: 437 ALALWGSMSGVGGCRRRDSLTTAIRYGRFWKSV 339
Score = 94.5 bits (200), Expect(2) = 8e-047
Identities = 45/82 (54%), Positives = 50/82 (60%)
Frame = +2 / -1
Query: 752 AIAHYTEITVVSVPAVIMSQRRPMTXXXXXXXXXXXXXXASTKCCWAPRCLRALACSSMI 931
A+AH T++TVVS+PAVIMS R P T ASTKCC AP LRA ACSSMI
Sbjct: 254 AMAHSTDMTVVSIPAVIMSHRSPKTVSSLRSYFSLRVNSASTKCCLAPLSLRACACSSMI 75
Query: 932 FTVRRSRRSPWALKACSSSGAS 997
VRRS S W L + S SG S
Sbjct: 74 LLVRRSLLSLWVL*SSSLSGHS 9
Score = 62.9 bits (131), Expect(3) = 4e-021
Identities = 28/70 (40%), Positives = 44/70 (62%)
Frame = +1 / -3
Query: 796 GDHVPEEAYDGVVAEVVLVPESEERVDEVLLGAALLEGPGVLLHDLHGEAVAPFAVGFEG 975
GDHVP ++ + V+ +V+L+ ESE+ + +VL ALLEG +L +D+ G+ + VG
Sbjct: 210 GDHVP*KSENCVITKVILLSESEQCIHKVLFSTALLEGVRMLFNDIIGQTIPSLIVGLVK 31
Query: 976 LLVVRGQPAQ 1005
LL+ QP Q
Sbjct: 30 LLIKWTQPYQ 1
Score = 45.5 bits (93), Expect(3) = 4e-021
Identities = 19/40 (47%), Positives = 21/40 (52%)
Frame = +1 / -3
Query: 394 AERQHAEVGALDVDVXXXXXXXXXXXXAVPHLGVARHRPH 513
AE QH EV ALDVD PH+GV+ HRPH
Sbjct: 612 AEGQHPEVTALDVDALLQKALRLELQRTAPHIGVSGHRPH 493
Score = 34.5 bits (69), Expect(3) = 4e-021
Identities = 12/16 (75%), Positives = 15/16 (93%)
Frame = +1 / -3
Query: 586 EHQRRRRVQAQGLLDD 633
+H+RRRRVQ +GLLDD
Sbjct: 420 QHERRRRVQTEGLLDD 373
>gb|BI776301.2|BI776301 EBem04_SQ001_H10_R embryo, 12 DPA, no treatment, cv Optic, EBem04
Hordeum vulgare subsp. vulgare cDNA clone
EBem04_SQ001_H10 5', mRNA sequence
Length = 537
Score = 344 bits (746), Expect = 4e-094
Identities = 143/179 (79%), Positives = 158/179 (88%)
Frame = -3 / +1
Query: 948 DRLTVKIMEEHARALKQRGAQQHFVDALFTLRDKYDLSDDTVIGLLWDMITAGTDTTVIS 769
DRLT KI+EEHA+ALK+ GA+QHFVDALFTLR+KYDLSDDTV GLLWDMITAG DTTVIS
Sbjct: 1 DRLTKKIIEEHAQALKESGAKQHFVDALFTLREKYDLSDDTVFGLLWDMITAGMDTTVIS 180
Query: 768 V*WAMAELLRNPRVQEKLQEELDRVVGRDRVLSETDFPNLPYLQAVVKESLRLHPPTPLM 589
V WAMAEL+RNPRVQ+KLQEELD VVGRDRV++ETDF NLPYL AVVKESLRLHPPTPLM
Sbjct: 181 VEWAMAELVRNPRVQQKLQEELDNVVGRDRVMAETDFQNLPYLMAVVKESLRLHPPTPLM 360
Query: 588 LPHRASASVKIAGYDIPKGXXXXXXXXXXARDPEVWDSPLEFRPERFLRENIDIKGADF 412
LPH+ASASVK+ GY+IPKG ARDP+VW SPLEFRPERFL E+IDIKG+DF
Sbjct: 361 LPHKASASVKVGGYNIPKGANVMVNVWAVARDPKVWSSPLEFRPERFLEESIDIKGSDF 537
Score = 103 bits (219), Expect(2) = 5e-041
Identities = 49/85 (57%), Positives = 50/85 (58%)
Frame = +2 / -2
Query: 413 KSAPLMSMFXXXXXXXXXXXXLSHTSGSRXXXXXXXXXXXXXGMS*PAILTLALALWGSI 592
KS PLMSM L HT GSR GM *P LTLALALWGS+
Sbjct: 536 KSLPLMSMLSSRKRSGLNSSGLLHTLGSRATAHTFTMTLAPLGML*PPTLTLALALWGSM 357
Query: 593 SGVGGCRRRDSLTTACR*GRFGKSV 667
SGVGGCRRRDSLTTA R GRF KSV
Sbjct: 356 SGVGGCRRRDSLTTAIRYGRFWKSV 282
Score = 85.4 bits (180), Expect(2) = 5e-041
Identities = 38/65 (58%), Positives = 42/65 (64%)
Frame = +2 / -2
Query: 752 AIAHYTEITVVSVPAVIMSQRRPMTXXXXXXXXXXXXXXASTKCCWAPRCLRALACSSMI 931
A+AH T++TVVS+PAVIMS R P T ASTKCC AP LRA ACSSMI
Sbjct: 197 AMAHSTDMTVVSIPAVIMSHRSPKTVSSLRSYFSLRVNSASTKCCLAPLSLRACACSSMI 18
Query: 932 FTVRR 946
F VRR
Sbjct: 17 FLVRR 3
>gb|AV931728.1|AV931728 AV931728 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp.
vulgare cDNA clone basd23p07 3', mRNA sequence
Length = 610
Score = 314 bits (681), Expect = 4e-085
Identities = 127/158 (80%), Positives = 140/158 (88%)
Frame = -3 / -2
Query: 630 VKESLRLHPPTPLMLPHRASASVKIAGYDIPKGXXXXXXXXXXARDPEVWDSPLEFRPER 451
VKESLRLHPPTPLMLPH+ASASVK+ GY+IPKG ARDP+VW SPLEFRPER
Sbjct: 609 VKESLRLHPPTPLMLPHKASASVKVGGYNIPKGANVMVNVWAVARDPKVWSSPLEFRPER 430
Query: 450 FLRENIDIKGADFRVLPFGAGRRVCPGAQLGINLVASMIGHMLHHFTWTLPSGTCPEDVS 271
FL E+IDIKG+DFRVLPFGAGRRVCPGAQLGINLVASMIGHMLHHF W+LP GT PED+S
Sbjct: 429 FLEESIDIKGSDFRVLPFGAGRRVCPGAQLGINLVASMIGHMLHHFKWSLPEGTRPEDIS 250
Query: 270 MMESPGLVTFMATPLQAVATPRLDKEELYRRVPSDV*A 157
MMESPGLVTFM TPLQA+ATPRL+KEELY+RVP ++*A
Sbjct: 249 MMESPGLVTFMGTPLQAIATPRLEKEELYKRVPVEI*A 136
Score = 240 bits (519), Expect = 9e-063
Identities = 107/158 (67%), Positives = 110/158 (69%)
Frame = +2 / +2
Query: 158 AHTSEGTRLYSSSLSRRGVATACSGVAMKVTSPGDSIMLTSSGQVPLGSVHVKWCSMWPI 337
A S GT LYSSS SRRGVA ACSGV MKVTSPGDSIML SSG VP G H+KWCSM PI
Sbjct: 137 AQISTGTLLYSSSFSRRGVAMACSGVPMKVTSPGDSIMLMSSGLVPSGRDHLKWCSMCPI 316
Query: 338 MDATRLIPSCAPGHTRRPAPNGSTRKSAPLMSMFXXXXXXXXXXXXLSHTSGSRXXXXXX 517
M+ATRLIPSCAPGHT RPAP GST KS PLMSM L HT GSR
Sbjct: 317 MEATRLIPSCAPGHTLRPAPKGSTLKSLPLMSMLSSRKRSGLNSSGLLHTLGSRATAHTF 496
Query: 518 XXXXXXXGMS*PAILTLALALWGSISGVGGCRRRDSLT 631
GM *P LTLALALWGS+SGVGGCRRRDSLT
Sbjct: 497 TMTLAPLGML*PPTLTLALALWGSMSGVGGCRRRDSLT 610
Score = 152 bits (327), Expect(2) = 8e-040
Identities = 69/118 (58%), Positives = 73/118 (61%)
Frame = +1 / +1
Query: 160 SHVRRDTPVQLLLVQARRGDGLQRRGHEGDEXXXXXXXXXXXXXXXRQRPREVVQHVADH 339
S + RD VQLLL+QARRGDGLQRR HEGDE RQRP E+VQHV DH
Sbjct: 139 SDLNRDPLVQLLLLQARRGDGLQRRAHEGDEPGGLHHANVLRPGAFRQRPLEMVQHVPDH 318
Query: 340 GRHEVDPELRAGAHPAAGAERQHAEVGALDVDVXXXXXXXXXXXXAVPHLGVARHRPH 513
G EVDPELRAGAHP A AE QH EV ALDVD PHLGV+ HRPH
Sbjct: 319 GGDEVDPELRAGAHPPARAEGQHPEVTALDVDALLQEALRPELQRTAPHLGVSGHRPH 492
Score = 31.8 bits (63), Expect(2) = 8e-040
Identities = 11/15 (73%), Positives = 14/15 (93%)
Frame = +1 / +1
Query: 586 EHQRRRRVQAQGLLD 630
+H+RRRRVQ +GLLD
Sbjct: 565 QHERRRRVQTEGLLD 609
>gb|AL504160.1|AL504160 AL504160 Hordeum vulgare Barke roots Hordeum vulgare subsp. vulgare
cDNA clone HW04G02V 5', mRNA sequence
Length = 606
Score = 278 bits (602), Expect(2) = 2e-080
Identities = 112/144 (77%), Positives = 125/144 (86%)
Frame = -3 / -2
Query: 588 LPHRASASVKIAGYDIPKGXXXXXXXXXXARDPEVWDSPLEFRPERFLRENIDIKGADFR 409
LPH+ASASVK+ GY+IPKG ARDP+VW SPLEFRPERFL E+IDIKG+DFR
Sbjct: 542 LPHKASASVKVGGYNIPKGANVMVNVWAVARDPKVWSSPLEFRPERFLEESIDIKGSDFR 363
Query: 408 VLPFGAGRRVCPGAQLGINLVASMIGHMLHHFTWTLPSGTCPEDVSMMESPGLVTFMATP 229
VLPFGAGRRVCPGAQLGINLVASMIGHMLHHF W+LP G PED+SMMESPGLVTFM TP
Sbjct: 362 VLPFGAGRRVCPGAQLGINLVASMIGHMLHHFKWSLPEGXRPEDISMMESPGLVTFMGTP 183
Query: 228 LQAVATPRLDKEELYRRVPSDV*A 157
LQA+ATPRL+KEELY+RVP ++*A
Sbjct: 182 LQAIATPRLEKEELYKRVPVEI*A 111
Score = 204 bits (440), Expect(2) = 9e-057
Identities = 92/143 (64%), Positives = 94/143 (65%)
Frame = +2 / +1
Query: 158 AHTSEGTRLYSSSLSRRGVATACSGVAMKVTSPGDSIMLTSSGQVPLGSVHVKWCSMWPI 337
A S GT LYSSS SRRGVA ACSGV MKVTSPGDSIML SSG P G H+KWCSM PI
Sbjct: 112 AQISTGTLLYSSSFSRRGVAMACSGVPMKVTSPGDSIMLMSSGLXPSGRDHLKWCSMCPI 291
Query: 338 MDATRLIPSCAPGHTRRPAPNGSTRKSAPLMSMFXXXXXXXXXXXXLSHTSGSRXXXXXX 517
M+ATRLIPSCAPGHT RPAP GST KS PLMSM L HT GSR
Sbjct: 292 MEATRLIPSCAPGHTLRPAPKGSTLKSLPLMSMLSSRKRSGLNSSGLLHTLGSRATAHTF 471
Query: 518 XXXXXXXGMS*PAILTLALALWG 586
GM *P LTLALALWG
Sbjct: 472 TMTLAPLGML*PPTLTLALALWG 540
Score = 152 bits (327), Expect(2) = 1e-039
Identities = 69/118 (58%), Positives = 73/118 (61%)
Frame = +1 / +3
Query: 160 SHVRRDTPVQLLLVQARRGDGLQRRGHEGDEXXXXXXXXXXXXXXXRQRPREVVQHVADH 339
S + RD VQLLL+QARRGDGLQRR HEGDE RQRP E+VQHV DH
Sbjct: 114 SDLNRDPLVQLLLLQARRGDGLQRRAHEGDEPGGLHHANVLRPGAFRQRPLEMVQHVPDH 293
Query: 340 GRHEVDPELRAGAHPAAGAERQHAEVGALDVDVXXXXXXXXXXXXAVPHLGVARHRPH 513
G EVDPELRAGAHP A AE QH EV ALDVD PHLGV+ HRPH
Sbjct: 294 GGDEVDPELRAGAHPPARAEGQHPEVTALDVDALLQEALRPELQRTAPHLGVSGHRPH 467
Score = 41.8 bits (85), Expect(2) = 2e-080
Identities = 17/20 (85%), Positives = 17/20 (85%)
Frame = -3 / -1
Query: 645 YLQAVVKESLRLHPPTPLML 586
YL VVKESLRLHP TPLML
Sbjct: 600 YLMXVVKESLRLHPQTPLML 541
Score = 36.8 bits (74), Expect(2) = 9e-057
Identities = 15/19 (78%), Positives = 16/19 (84%)
Frame = +2 / +2
Query: 587 SISGVGGCRRRDSLTTACR 643
S+SGV GCRRRDSLTT R
Sbjct: 542 SMSGVCGCRRRDSLTTXIR 598
Score = 30.9 bits (61), Expect(2) = 1e-039
Identities = 11/16 (68%), Positives = 14/16 (87%)
Frame = +1 / +1
Query: 586 EHQRRRRVQAQGLLDD 633
+H+RR RVQ +GLLDD
Sbjct: 541 KHERRLRVQTEGLLDD 588
>gb|BQ664275.1|BQ664275 HV02K08u HV Hordeum vulgare subsp. vulgare cDNA clone HV02K08
3-PRIME, mRNA sequence
Length = 568
Score = 271 bits (586), Expect = 5e-072
Identities = 110/140 (78%), Positives = 122/140 (87%)
Frame = -3 / -1
Query: 576 ASASVKIAGYDIPKGXXXXXXXXXXARDPEVWDSPLEFRPERFLRENIDIKGADFRVLPF 397
ASASVK+ GY+IPKG ARDP+VW SPLEFRPERFL E+IDIKG+DFRVLPF
Sbjct: 568 ASASVKVGGYNIPKGANVMVNVWAVARDPKVWSSPLEFRPERFLEESIDIKGSDFRVLPF 389
Query: 396 GAGRRVCPGAQLGINLVASMIGHMLHHFTWTLPSGTCPEDVSMMESPGLVTFMATPLQAV 217
GAGRRVCPGAQLGINLVASMIGHMLHHF W+LP GT PED+SMMESPGLVTFM TPLQA+
Sbjct: 388 GAGRRVCPGAQLGINLVASMIGHMLHHFKWSLPEGTRPEDISMMESPGLVTFMGTPLQAI 209
Query: 216 ATPRLDKEELYRRVPSDV*A 157
ATPRL+KEELY+RVP ++*A
Sbjct: 208 ATPRLEKEELYKRVPVEI*A 149
Score = 195 bits (420), Expect = 4e-049
Identities = 89/139 (64%), Positives = 91/139 (65%)
Frame = +2 / +3
Query: 158 AHTSEGTRLYSSSLSRRGVATACSGVAMKVTSPGDSIMLTSSGQVPLGSVHVKWCSMWPI 337
A S GT LYSSS SRRGVA ACSGV MKVTSPGDSIML SSG VP G H+KWCSM PI
Sbjct: 150 AQISTGTLLYSSSFSRRGVAMACSGVPMKVTSPGDSIMLMSSGLVPSGRDHLKWCSMCPI 329
Query: 338 MDATRLIPSCAPGHTRRPAPNGSTRKSAPLMSMFXXXXXXXXXXXXLSHTSGSRXXXXXX 517
M+ATRLIPSCAPGHT RPAP GST KS PLMSM L HT GSR
Sbjct: 330 MEATRLIPSCAPGHTLRPAPKGSTLKSLPLMSMLSSRKRSGLNSSGLLHTLGSRATAHTF 509
Query: 518 XXXXXXXGMS*PAILTLAL 574
GM *P LTLAL
Sbjct: 510 TMTLAPLGML*PPTLTLAL 566
Score = 152 bits (327), Expect = 3e-036
Identities = 69/118 (58%), Positives = 73/118 (61%)
Frame = +1 / +2
Query: 160 SHVRRDTPVQLLLVQARRGDGLQRRGHEGDEXXXXXXXXXXXXXXXRQRPREVVQHVADH 339
S + RD VQLLL+QARRGDGLQRR HEGDE RQRP E+VQHV DH
Sbjct: 152 SDLNRDPLVQLLLLQARRGDGLQRRAHEGDEPGGLHHANVLRPGAFRQRPLEMVQHVPDH 331
Query: 340 GRHEVDPELRAGAHPAAGAERQHAEVGALDVDVXXXXXXXXXXXXAVPHLGVARHRPH 513
G EVDPELRAGAHP A AE QH EV ALDVD PHLGV+ HRPH
Sbjct: 332 GGDEVDPELRAGAHPPARAEGQHPEVTALDVDALLQEALRPELQRTAPHLGVSGHRPH 505
>gb|CB858927.1|CB858927 HI08L23w HI Hordeum vulgare subsp. vulgare cDNA clone HI08L23
3-PRIME, mRNA sequence
Length = 663
Score = 121 bits (258), Expect(4) = 7e-070
Identities = 49/55 (89%), Positives = 54/55 (98%)
Frame = -3 / -2
Query: 891 AQQHFVDALFTLRDKYDLSDDTVIGLLWDMITAGTDTTVISV*WAMAELLRNPRV 727
++QHFVDALFTLRDKYDLSDDTVIGLLWDMITAGTDTTVI+V WA+AEL+RNPRV
Sbjct: 488 SKQHFVDALFTLRDKYDLSDDTVIGLLWDMITAGTDTTVITVEWAVAELVRNPRV 324
Score = 103 bits (220), Expect(4) = 7e-070
Identities = 40/55 (72%), Positives = 46/55 (83%)
Frame = -3 / -2
Query: 324 LHHFTWTLPSGTCPEDVSMMESPGLVTFMATPLQAVATPRLDKEELYRRVPSDV* 160
+HHFTW LP G ED+ MMESPGL+TFM TPLQ VATPRL+KEELY+RVP D+*
Sbjct: 326 VHHFTWALPDGARTEDLDMMESPGLITFMRTPLQVVATPRLEKEELYKRVPVDM* 162
Score = 88.6 bits (187), Expect(4) = 2e-045
Identities = 38/56 (67%), Positives = 41/56 (73%)
Frame = +2 / +1
Query: 161 HTSEGTRLYSSSLSRRGVATACSGVAMKVTSPGDSIMLTSSGQVPLGSVHVKWCSM 328
H S GTRL SSS SRRGVAT CSGV M V SPGDSIM SS + P GS VKWC++
Sbjct: 163 HMSTGTRL*SSSFSRRGVATTCSGVRMNVISPGDSIMSRSSVRAPSGSAQVKWCTL 330
Score = 72.5 bits (152), Expect(4) = 2e-045
Identities = 31/36 (86%), Positives = 32/36 (88%)
Frame = +1 / +3
Query: 790 AGGDHVPEEAYDGVVAEVVLVPESEERVDEVLLGAA 897
AGGDHVPEEA DGVVAEVVLVPE EERVDE+LL A
Sbjct: 387 AGGDHVPEEANDGVVAEVVLVPEREERVDEMLLAGA 494
Score = 63.4 bits (132), Expect(4) = 7e-070
Identities = 25/38 (65%), Positives = 31/38 (81%)
Frame = -3 / -2
Query: 996 LAPDDEQAFKAHGERRDRLTVKIMEEHARALKQRGAQQ 883
L P DE A++AHG+RRDRLTVKIMEEHARA ++ G +
Sbjct: 596 LTPVDEVAYQAHGDRRDRLTVKIMEEHARAFERSGTSK 483
Score = 51.5 bits (106), Expect(4) = 2e-045
Identities = 24/39 (61%), Positives = 26/39 (66%)
Frame = +2 / +1
Query: 881 CCWAPRCLRALACSSMIFTVRRSRRSPWALKACSSSGAS 997
C P +ALACSSMI TV RSR SPWA A SS+G S
Sbjct: 481 CLLVPLRSKALACSSMILTVSRSRLSPWA**ATSSTGVS 597
Score = 38.6 bits (78), Expect(4) = 7e-070
Identities = 16/18 (88%), Positives = 18/18 (100%)
Frame = -3 / -1
Query: 1065 IVHNGIKIGASLSIAQHI 1012
IV+NGIKIGASLSIA+HI
Sbjct: 663 IVNNGIKIGASLSIAEHI 610
Score = 31.8 bits (63), Expect(4) = 2e-045
Identities = 12/17 (70%), Positives = 14/17 (82%)
Frame = +2 / +2
Query: 1013 MCCAMERDAPILMPLWT 1063
MC AM+ DAPIL+PL T
Sbjct: 611 MCSAMDSDAPILIPLLT 661
>gb|AV836678.1|AV836678 AV836678 K. Sato unpublished cDNA library: Hordeum vulgare subsp.
vulgare seedling leaves second leaf stage Hordeum vulgare
subsp. vulgare cDNA clone basd23p07, mRNA sequence
Length = 501
Score = 250 bits (541), Expect(2) = 9e-068
Identities = 104/137 (75%), Positives = 121/137 (88%)
Frame = -3 / +2
Query: 1065 IVHNGIKIGASLSIAQHIPWLRWLAPDDEQAFKAHGERRDRLTVKIMEEHARALKQRGAQ 886
IV+NGIKIGASLS+A++I +LRWL P +E+ +K H ERRDRLT KI+EEHA+ALK+ GA+
Sbjct: 59 IVNNGIKIGASLSVAEYIWYLRWLCPLNEELYKTHNERRDRLTKKIIEEHAQALKESGAK 238
Query: 885 QHFVDALFTLRDKYDLSDDTVIGLLWDMITAGTDTTVISV*WAMAELLRNPRVQEKLQEE 706
QHFVDALFTLR+KYDLSDDTV GLLWDMITAG DTTVISV WAMAEL+RNPRVQ+KLQEE
Sbjct: 239 QHFVDALFTLREKYDLSDDTVFGLLWDMITAGMDTTVISVEWAMAELVRNPRVQQKLQEE 418
Query: 705 LDRVVGRDRVLSETDFP 655
LD VVGRDRV++ P
Sbjct: 419 LDNVVGRDRVMARDRLP 469
Score = 122 bits (262), Expect = 2e-027
Identities = 59/105 (56%), Positives = 66/105 (62%)
Frame = +2 / -1
Query: 752 AIAHYTEITVVSVPAVIMSQRRPMTXXXXXXXXXXXXXXASTKCCWAPRCLRALACSSMI 931
A+AH T++TVVS+PAVIMS R P T ASTKCC AP LRA ACSSMI
Sbjct: 372 AMAHSTDMTVVSIPAVIMSHRSPKTVSSLRSYFSLRVNSASTKCCLAPLSLRACACSSMI 193
Query: 932 FTVRRSRRSPWALKACSSSGASQRSHGMCCAMERDAPILMPLWTI 1066
F VRRS S W L + S SG S + M A ERDAPIL+PL TI
Sbjct: 192 FLVRRSLLSLWVL*SSSLSGHSHLRYQMYSATERDAPILIPLLTI 58
Score = 27.2 bits (53), Expect(2) = 9e-068
Identities = 10/12 (83%), Positives = 10/12 (83%)
Frame = -3 / +3
Query: 669 ETDFPNLPYLQA 634
ETDF NLPYL A
Sbjct: 456 ETDFQNLPYLMA 491
>gb|BI958347.1|BI958347 HVSMEn0014I13f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0014I13f, mRNA sequence
Length = 757
Score = 229 bits (494), Expect = 2e-059
Identities = 92/112 (82%), Positives = 102/112 (91%)
Frame = -3 / -1
Query: 492 PEVWDSPLEFRPERFLRENIDIKGADFRVLPFGAGRRVCPGAQLGINLVASMIGHMLHHF 313
P+ SPLEFRPERFL E+IDIKG+DF VLPFGAGRRVCPGAQLGINLVASMIGHMLHHF
Sbjct: 754 PQGGSSPLEFRPERFLEESIDIKGSDFGVLPFGAGRRVCPGAQLGINLVASMIGHMLHHF 575
Query: 312 TWTLPSGTCPEDVSMMESPGLVTFMATPLQAVATPRLDKEELYRRVPSDV*A 157
W+LP GT PED+SMMESPGLVTFM TPLQA+ATPRL+KEELY+RVP ++*A
Sbjct: 574 KWSLPEGTRPEDISMMESPGLVTFMGTPLQAIATPRLEKEELYKRVPVEI*A 419
Score = 172 bits (370), Expect = 3e-042
Identities = 74/93 (79%), Positives = 76/93 (81%)
Frame = +2 / +3
Query: 158 AHTSEGTRLYSSSLSRRGVATACSGVAMKVTSPGDSIMLTSSGQVPLGSVHVKWCSMWPI 337
A S GT LYSSS SRRGVA ACSGV MKVTSPGDSIML SSG VP G H+KWCSM PI
Sbjct: 420 AQISTGTLLYSSSFSRRGVAMACSGVPMKVTSPGDSIMLMSSGLVPSGRDHLKWCSMCPI 599
Query: 338 MDATRLIPSCAPGHTRRPAPNGSTRKSAPLMSM 436
M+ATRLIPSCAPGHT RPAP GST KS PLMSM
Sbjct: 600 MEATRLIPSCAPGHTLRPAPKGSTPKSLPLMSM 698
Score = 133 bits (285), Expect = 2e-030
Identities = 60/92 (65%), Positives = 64/92 (69%)
Frame = +1 / +2
Query: 160 SHVRRDTPVQLLLVQARRGDGLQRRGHEGDEXXXXXXXXXXXXXXXRQRPREVVQHVADH 339
S + RD VQLLL+QARRGDGLQRR HEGDE RQRP E+VQHV DH
Sbjct: 422 SDLNRDPLVQLLLLQARRGDGLQRRAHEGDEPGGLHHANVLRPGAFRQRPLEMVQHVPDH 601
Query: 340 GRHEVDPELRAGAHPAAGAERQHAEVGALDVD 435
G EVDPELRAGAHP A AERQH EV ALDV+
Sbjct: 602 GGDEVDPELRAGAHPPARAERQHPEVTALDVN 697
>gb|AV915951.1|AV915951 AV915951 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags16m22 5', mRNA sequence
Length = 395
Score = 204 bits (440), Expect = 7e-052
Identities = 81/96 (84%), Positives = 91/96 (94%)
Frame = -3 / +3
Query: 444 RENIDIKGADFRVLPFGAGRRVCPGAQLGINLVASMIGHMLHHFTWTLPSGTCPEDVSMM 265
R++IDIKG+DFRVLPFGAGRRVCPGAQLGINLVASMIGHMLHHF W+LP GT PED+SMM
Sbjct: 21 RKSIDIKGSDFRVLPFGAGRRVCPGAQLGINLVASMIGHMLHHFKWSLPEGTRPEDISMM 200
Query: 264 ESPGLVTFMATPLQAVATPRLDKEELYRRVPSDV*A 157
ESPGLVTFM TPLQA+ATPRL+KEELY+RVP ++*A
Sbjct: 201 ESPGLVTFMGTPLQAIATPRLEKEELYKRVPVEI*A 308
Score = 172 bits (370), Expect = 3e-042
Identities = 74/93 (79%), Positives = 76/93 (81%)
Frame = +2 / -2
Query: 158 AHTSEGTRLYSSSLSRRGVATACSGVAMKVTSPGDSIMLTSSGQVPLGSVHVKWCSMWPI 337
A S GT LYSSS SRRGVA ACSGV MKVTSPGDSIML SSG VP G H+KWCSM PI
Sbjct: 307 AQISTGTLLYSSSFSRRGVAMACSGVPMKVTSPGDSIMLMSSGLVPSGRDHLKWCSMCPI 128
Query: 338 MDATRLIPSCAPGHTRRPAPNGSTRKSAPLMSM 436
M+ATRLIPSCAPGHT RPAP GST KS PLMSM
Sbjct: 127 MEATRLIPSCAPGHTLRPAPKGSTLKSLPLMSM 29
Score = 132 bits (283), Expect = 3e-030
Identities = 60/92 (65%), Positives = 63/92 (68%)
Frame = +1 / -1
Query: 160 SHVRRDTPVQLLLVQARRGDGLQRRGHEGDEXXXXXXXXXXXXXXXRQRPREVVQHVADH 339
S + RD VQLLL+QARRGDGLQRR HEGDE RQRP E+VQHV DH
Sbjct: 305 SDLNRDPLVQLLLLQARRGDGLQRRAHEGDEPGGLHHANVLRPGAFRQRPLEMVQHVPDH 126
Query: 340 GRHEVDPELRAGAHPAAGAERQHAEVGALDVD 435
G EVDPELRAGAHP A AE QH EV ALDVD
Sbjct: 125 GGDEVDPELRAGAHPPARAEGQHPEVTALDVD 30
>gb|BF254550.2|BF254550 HVSMEf0004F12f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEf0004F12f, mRNA sequence
Length = 799
Score = 185 bits (398), Expect = 4e-046
Identities = 78/119 (65%), Positives = 89/119 (74%)
Frame = -3 / +3
Query: 750 ELLRNPRVQEKLQEELDRVVGRDRVLSETDFPNLPYLQAVVKESLRLHPPTPLMLPHRAS 571
+++RNPRVQ K+QEELDRVVGRDRVLSETD P+LPYLQAVVKESLRLHPPTPLMLPH+AS
Sbjct: 9 DVVRNPRVQHKVQEELDRVVGRDRVLSETDLPSLPYLQAVVKESLRLHPPTPLMLPHKAS 188
Query: 570 ASVKIAGYDIPKGXXXXXXXXXXARDPEVWDSPLEFRPERFLRENIDIKGADFRVLPFG 394
A VK+AGY IPKG AR+P WD+PLE RPER L + + LP G
Sbjct: 189 ADVKVAGYYIPKGASVTENVWAIARNPYAWDTPLEIRPERLLPTTLTLMARTVGPLPDG 365
>gb|AV917230.1|AV917230 AV917230 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags18a18 5', mRNA sequence
Length = 619
Score = 182 bits (393), Expect = 2e-045
Identities = 77/201 (38%), Positives = 107/201 (53%)
Frame = -3 / +3
Query: 813 LWDMITAGTDTTVISV*WAMAELLRNPRVQEKLQEELDRVVGRDRVLSETDFPNLPYLQA 634
L+D A TDT+ IS W M EL+R+PRV K Q E+ G + +D P L YL+
Sbjct: 3 LFDTFMAATDTSSISSYWVMTELIRHPRVLHKAQAEVRAAAGGAPQVRISDMPKLKYLRM 182
Query: 633 VVKESLRLHPPTPLMLPHRASASVKIAGYDIPKGXXXXXXXXXXARDPEVWDSPLEFRPE 454
V+ E+ R+HPP +++P +++ GYDIP RDP W P F PE
Sbjct: 183 VLSETFRMHPPATMLVPRETMRPIRLGGYDIPANTMLMVNAWAIGRDPASWKDPEVFYPE 362
Query: 453 RFLRENIDIKGADFRVLPFGAGRRVCPGAQLGINLVASMIGHMLHHFTWTLPSGTCPEDV 274
RF ++D G + +LPFGAGRR+CPG +G+ ++ ++L+ F W LP G EDV
Sbjct: 363 RFEELDVDFNGGHYELLPFGAGRRICPGLAMGVANTEFILANLLYCFNWALPQGMRSEDV 542
Query: 273 SMMESPGLVTFMATPLQAVAT 211
+ E GL PL V T
Sbjct: 543 GVEEFGGLTFRKKKPLVLVPT 605
>gb|AV919454.1|AV919454 AV919454 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags6b21 3', mRNA sequence
Length = 712
Score = 181 bits (389), Expect = 8e-045
Identities = 76/200 (38%), Positives = 106/200 (53%)
Frame = -3 / -1
Query: 810 WDMITAGTDTTVISV*WAMAELLRNPRVQEKLQEELDRVVGRDRVLSETDFPNLPYLQAV 631
+D A TDT+ IS W M EL+R+PRV K Q E+ G + +D P L YL+ V
Sbjct: 712 FDTFMAATDTSSISSYWVMTELIRHPRVLHKAQAEVRAAAGGAPQVRISDMPKLKYLRMV 533
Query: 630 VKESLRLHPPTPLMLPHRASASVKIAGYDIPKGXXXXXXXXXXARDPEVWDSPLEFRPER 451
+ E+ R+HPP +++P +++ GYDIP RDP W P F PER
Sbjct: 532 LSETFRMHPPATMLVPRETMRPIRLGGYDIPANTMLMVNAWAIGRDPASWKDPEVFYPER 353
Query: 450 FLRENIDIKGADFRVLPFGAGRRVCPGAQLGINLVASMIGHMLHHFTWTLPSGTCPEDVS 271
F ++D G + +LPFGAGRR+CPG +G+ ++ ++L+ F W LP G EDV
Sbjct: 352 FEELDVDFNGGHYELLPFGAGRRICPGLAMGVANTEFILANLLYCFNWALPQGMRSEDVG 173
Query: 270 MMESPGLVTFMATPLQAVAT 211
+ E GL PL V T
Sbjct: 172 VEEFGGLTFRKKKPLVLVPT 113
>gb|BQ471267.1|BQ471267 HV01P03T HV Hordeum vulgare subsp. vulgare cDNA clone HV01P03
5-PRIME, mRNA sequence
Length = 610
Score = 180 bits (388), Expect = 1e-044
Identities = 74/194 (38%), Positives = 105/194 (54%)
Frame = -3 / +2
Query: 831 DTVIGLLWDMITAGTDTTVISV*WAMAELLRNPRVQEKLQEELDRVVGRDRVLSETDFPN 652
D +L+D A TDT+ IS W M EL+R+PRV K Q E+ G + +D P
Sbjct: 14 DHAKSILFDTFMAATDTSSISSYWVMTELIRHPRVLHKAQAEVRAAAGGAPQVRISDMPK 193
Query: 651 LPYLQAVVKESLRLHPPTPLMLPHRASASVKIAGYDIPKGXXXXXXXXXXARDPEVWDSP 472
L YL+ V+ E+ R+HPP +++P +++ GYDIP RDP W P
Sbjct: 194 LKYLRMVLSETFRMHPPATMLVPRETMRPIRLGGYDIPANTMLMVNAWAIGRDPASWKDP 373
Query: 471 LEFRPERFLRENIDIKGADFRVLPFGAGRRVCPGAQLGINLVASMIGHMLHHFTWTLPSG 292
F PERF ++D G + +LPFGAGRR+CPG +G+ ++ ++L+ F W LP G
Sbjct: 374 EVFYPERFEELDVDFNGGHYELLPFGAGRRICPGLAMGVANTEFILANLLYCFNWALPQG 553
Query: 291 TCPEDVSMMESPGL 250
EDV + E GL
Sbjct: 554 MRSEDVGVEEFGGL 595
>gb|BJ464883.1|BJ464883 BJ464883 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags36h03 5', mRNA sequence
Length = 582
Score = 179 bits (385), Expect = 3e-044
Identities = 73/188 (38%), Positives = 103/188 (54%)
Frame = -3 / +3
Query: 813 LWDMITAGTDTTVISV*WAMAELLRNPRVQEKLQEELDRVVGRDRVLSETDFPNLPYLQA 634
L+D A TDT+ IS W M EL+R+PRV K Q E+ G + +D P L YL+
Sbjct: 3 LFDTFMAATDTSSISSYWVMTELIRHPRVLHKAQAEVRAAAGGAPQVRISDMPKLKYLRM 182
Query: 633 VVKESLRLHPPTPLMLPHRASASVKIAGYDIPKGXXXXXXXXXXARDPEVWDSPLEFRPE 454
V+ E+ R+HPP +++P +++ GYDIP RDP W P F PE
Sbjct: 183 VLSETFRMHPPATMLVPRETMRPIRLGGYDIPANTMLMVNAWAIGRDPASWKDPEVFYPE 362
Query: 453 RFLRENIDIKGADFRVLPFGAGRRVCPGAQLGINLVASMIGHMLHHFTWTLPSGTCPEDV 274
RF ++D G + +LPFGAGRR+CPG +G+ ++ ++L+ F W LP G EDV
Sbjct: 363 RFEELDVDFNGGHYELLPFGAGRRICPGLAMGVANTEFILANLLYCFNWALPQGMRSEDV 542
Query: 273 SMMESPGL 250
+ E GL
Sbjct: 543 GVEEFGGL 566
>gb|BJ466813.1|BJ466813 BJ466813 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags34b17 3', mRNA sequence
Length = 729
Score = 178 bits (384), Expect = 4e-044
Identities = 75/195 (38%), Positives = 104/195 (53%)
Frame = -3 / -1
Query: 795 AGTDTTVISV*WAMAELLRNPRVQEKLQEELDRVVGRDRVLSETDFPNLPYLQAVVKESL 616
A TDT+ IS W M EL+R+PRV K Q E+ G + +D P L YL+ V+ E+
Sbjct: 726 AATDTSSISSYWVMTELIRHPRVLHKAQAEVRAAAGGAPQVRISDMPKLKYLRMVLSETF 547
Query: 615 RLHPPTPLMLPHRASASVKIAGYDIPKGXXXXXXXXXXARDPEVWDSPLEFRPERFLREN 436
R+HPP +++P +++ GYDIP RDP W P F PERF +
Sbjct: 546 RMHPPATMLVPRETMRPIRLGGYDIPANTMLMVNAWAIGRDPASWKDPEVFYPERFEELD 367
Query: 435 IDIKGADFRVLPFGAGRRVCPGAQLGINLVASMIGHMLHHFTWTLPSGTCPEDVSMMESP 256
+D G + +LPFGAGRR+CPG +G+ ++ ++L+ F W LP G EDV + E
Sbjct: 366 VDFNGGHYELLPFGAGRRICPGLAMGVANTEFILANLLYCFNWALPQGMRSEDVGVEEFG 187
Query: 255 GLVTFMATPLQAVAT 211
GL PL V T
Sbjct: 186 GLTFRKKKPLVLVPT 142
>gb|AV936726.1|AV936726 AV936726 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal5k12 3', mRNA sequence
Length = 774
Score = 95.9 bits (203), Expect(3) = 7e-044
Identities = 40/80 (50%), Positives = 48/80 (60%)
Frame = -3 / -3
Query: 678 VLSETDFPNLPYLQAVVKESLRLHPPTPLMLPHRASASVKIAGYDIPKGXXXXXXXXXXA 499
++SETD N+ YL+AV+KESLRLHP PL+ PH A A I GY +P G
Sbjct: 598 IISETDMNNMTYLRAVIKESLRLHPVAPLLAPHLAMADCIIDGYIVPAGTRVVVNAWAIG 419
Query: 498 RDPEVWDSPLEFRPERFLRE 439
RDP W+ P EF PERF E
Sbjct: 418 RDPSSWEYPEEFIPERFTDE 359
Score = 81.3 bits (171), Expect(3) = 7e-044
Identities = 36/84 (42%), Positives = 49/84 (58%)
Frame = -3 / -3
Query: 438 NIDIKGADFRVLPFGAGRRVCPGAQLGINLVASMIGHMLHHFTWTLPSGTCPEDVSMMES 259
+I+ KG DF+ LPFGAGRR+CPG LGI V M+ +++ HF W LP G +D+ M E
Sbjct: 346 HINFKGNDFQFLPFGAGRRMCPGMNLGIANVELMLANLVCHFDWELPLGVGRKDIDMTEV 167
Query: 258 PGLVTFMATPLQAVATPRLDKEEL 187
GL L V R+ ++L
Sbjct: 166 FGLTVRRKEKLLLVPKSRM*SQKL 95
Score = 39.1 bits (79), Expect(3) = 7e-044
Identities = 17/49 (34%), Positives = 30/49 (61%)
Frame = -3 / -3
Query: 849 KYDLSDDTVIGLLWDMITAGTDTTVISV*WAMAELLRNPRVQEKLQEEL 703
+Y L+ + + LL D+ DT+ + + +AEL+R P + EKLQ+E+
Sbjct: 772 EYALTREHMKALLTDVFFGAIDTSANVLEFTLAELMRRPHMMEKLQDEV 626
>gb|AJ434580.1|AJ434580 AJ434580 S00002 Hordeum vulgare subsp. vulgare cDNA clone
S0000200005G01F1, mRNA sequence
Length = 486
Score = 176 bits (378), Expect = 2e-043
Identities = 70/146 (47%), Positives = 90/146 (61%)
Frame = -3 / +3
Query: 645 YLQAVVKESLRLHPPTPLMLPHRASASVKIAGYDIPKGXXXXXXXXXXARDPEVWDSPLE 466
Y+QA++KE+ RLHPP PL+LP + A++KIAGY IPKG RD +VWD P +
Sbjct: 6 YIQAIIKETFRLHPPAPLLLPRQPEATLKIAGYTIPKGSRVFVNVWAIGRDKDVWDEPEK 185
Query: 465 FRPERFLRENIDIKGADFRVLPFGAGRRVCPGAQLGINLVASMIGHMLHHFTWTLPSGTC 286
F PERFL ID +G DF +LPFGAGRR+CPG L +V M+ +LH F W+LP
Sbjct: 186 FMPERFLGSTIDFRGVDFELLPFGAGRRICPGMTLAARMVHLMLASLLHQFKWSLPVELE 365
Query: 285 PEDVSMMESPGLVTFMATPLQAVATP 208
+ + M + GL PL VATP
Sbjct: 366 RDGIDMEDKFGLTLTKVVPLCIVATP 443
>gb|BM816874.1|BM816874 HB105E09_SK.ab1 HB Hordeum vulgare subsp. vulgare cDNA clone
HB105E09_SK.ab1 similar to Steroid
17-alpha-monooxygenase,Unspecific monooxygenase, mRNA
sequence
Length = 884
Score = 84.9 bits (179), Expect(3) = 5e-043
Identities = 36/80 (45%), Positives = 45/80 (56%)
Frame = -3 / +2
Query: 678 VLSETDFPNLPYLQAVVKESLRLHPPTPLMLPHRASASVKIAGYDIPKGXXXXXXXXXXA 499
V++E D + YL+AV+KESLRLHP PL++PH A I GY +P G
Sbjct: 254 VVTEADISKMTYLRAVIKESLRLHPVAPLLVPHLAMIDGNIDGYMVPAGTHVLINVWAIG 433
Query: 498 RDPEVWDSPLEFRPERFLRE 439
RD W+ EF PERFL E
Sbjct: 434 RDSSYWEEAEEFIPERFLDE 493
Score = 81.7 bits (172), Expect(3) = 5e-043
Identities = 31/62 (50%), Positives = 43/62 (69%)
Frame = -3 / +2
Query: 435 IDIKGADFRVLPFGAGRRVCPGAQLGINLVASMIGHMLHHFTWTLPSGTCPEDVSMMESP 256
++ KG DF+ LPFGAGRR+CPG LGI V M+ ++++HF W LP G +D++M E
Sbjct: 509 VNFKGNDFQFLPFGAGRRMCPGINLGIATVELMLANLMYHFDWELPLGVERKDINMTELF 688
Query: 255 GL 250
GL
Sbjct: 689 GL 694
Score = 46.9 bits (96), Expect(3) = 5e-043
Identities = 21/64 (32%), Positives = 42/64 (65%)
Frame = -3 / +2
Query: 882 HFVDALFTLRDKYDLSDDTVIGLLWDMITAGTDTTVISV*WAMAELLRNPRVQEKLQEEL 703
+FVD L +++ +Y L+ + + LL D+ T+T+ ++ + +AEL+R+P + KLQ+E+
Sbjct: 47 NFVDILLSVQMEYGLTKEDMKALLTDVFFGSTETSSNTLEFTLAELVRSPCLIGKLQDEV 226
Query: 702 DRVV 691
+V
Sbjct: 227 RSIV 238
>gb|BJ546119.1|BJ546119 BJ546119 K. Sato unpublished cDNA library, cv. Akashinriki
vegetative stage leaves Hordeum vulgare subsp. vulgare
cDNA clone baak33l17 3', mRNA sequence
Length = 689
Score = 92.3 bits (195), Expect(3) = 2e-042
Identities = 39/80 (48%), Positives = 47/80 (58%)
Frame = -3 / -1
Query: 678 VLSETDFPNLPYLQAVVKESLRLHPPTPLMLPHRASASVKIAGYDIPKGXXXXXXXXXXA 499
++SETD N+ YL+AV+KESLRL P PL+ PH A A I GY +P G
Sbjct: 512 IISETDMNNMTYLRAVIKESLRLRPVAPLLAPHLAMADCIIDGYIVPAGTRVVVNAWAIG 333
Query: 498 RDPEVWDSPLEFRPERFLRE 439
RDP W+ P EF PERF E
Sbjct: 332 RDPSSWEYPEEFIPERFTDE 273
Score = 79.0 bits (166), Expect(3) = 2e-042
Identities = 32/63 (50%), Positives = 42/63 (66%)
Frame = -3 / -1
Query: 438 NIDIKGADFRVLPFGAGRRVCPGAQLGINLVASMIGHMLHHFTWTLPSGTCPEDVSMMES 259
+I+ KG DF+ LPFGAGRR+CPG LGI V M+ +++ HF W LP G +D+ M E
Sbjct: 260 HINFKGNDFQFLPFGAGRRMCPGMNLGIANVELMLANLVCHFDWELPLGVGRKDIDMTEV 81
Query: 258 PGL 250
GL
Sbjct: 80 FGL 72
Score = 40.5 bits (82), Expect(3) = 2e-042
Identities = 18/53 (33%), Positives = 32/53 (60%)
Frame = -3 / -1
Query: 849 KYDLSDDTVIGLLWDMITAGTDTTVISV*WAMAELLRNPRVQEKLQEELDRVV 691
+Y L+ + + LL D+ DT+ + + +AEL+R P + EKLQ+E+ +V
Sbjct: 686 EYALTREHMKALLTDVFFGAIDTSANVLEFTLAELMRRPHMMEKLQDEVRGIV 528
>gb|BF259778.3|BF259778 HVSMEf0020D20f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEf0020D20f, mRNA sequence
Length = 675
Score = 171 bits (367), Expect = 8e-042
Identities = 66/159 (41%), Positives = 91/159 (57%)
Frame = -3 / +1
Query: 693 VGRDRVLSETDFPNLPYLQAVVKESLRLHPPTPLMLPHRASASVKIAGYDIPKGXXXXXX 514
+G + E+D L YLQA+VKE+ RLHPP P +LPH A + ++ GY +PKG
Sbjct: 1 IGSKEQVEESDIGQLKYLQAIVKETFRLHPPAPFLLPHVAETTTQVQGYTVPKGTRLLVN 180
Query: 513 XXXXARDPEVWDSPLEFRPERFLRENIDIKGADFRVLPFGAGRRVCPGAQLGINLVASMI 334
D +VW P +F PERFL + +D KG DF +LPFG+GRR+CPG L + +V M+
Sbjct: 181 VWAIGHDGKVWPEPXKFMPERFLEKEVDFKGRDFELLPFGSGRRMCPGTPLAVRIVHLML 360
Query: 333 GHMLHHFTWTLPSGTCPEDVSMMESPGLVTFMATPLQAV 217
+LH F W LP + ++M E G M PL +
Sbjct: 361 ASLLHRFQWRLPVDVEKKGLAMTEKLGANLAMGPPLSGL 477
>gb|BJ546669.1|BJ546669 BJ546669 K. Sato unpublished cDNA library, cv. Akashinriki
vegetative stage leaves Hordeum vulgare subsp. vulgare
cDNA clone baak45m01 3', mRNA sequence
Length = 730
Score = 171 bits (367), Expect = 8e-042
Identities = 70/164 (42%), Positives = 94/164 (57%)
Frame = -3 / -2
Query: 741 RNPRVQEKLQEELDRVVGRDRVLSETDFPNLPYLQAVVKESLRLHPPTPLMLPHRASASV 562
R P V K Q E+ + ++E D NL YL+ V+KE++RLHP PL+LP A +
Sbjct: 729 RYPNVMLKAQAEVRNNLQGKSKVTEDDLANLKYLRLVIKETMRLHPAAPLLLPREAMEAC 550
Query: 561 KIAGYDIPKGXXXXXXXXXXARDPEVWDSPLEFRPERFLRENIDIKGADFRVLPFGAGRR 382
KI GYDIP+G RDP+ W P EF+PERF +D KG +F +PFGAGRR
Sbjct: 549 KILGYDIPEGTTVLVNAWAIGRDPKYWQDPEEFKPERFESGMVDFKGTNFEYIPFGAGRR 370
Query: 381 VCPGAQLGINLVASMIGHMLHHFTWTLPSGTCPEDVSMMESPGL 250
+CPG + ++ +L+HF W LPSG P+ + M E GL
Sbjct: 369 MCPGMTFAQASMEIVLASLLYHFDWELPSGVKPDGLDMTEEMGL 238
>gb|AV930421.1|AV930421 AV930421 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp.
vulgare cDNA clone basd22h15 3', mRNA sequence
Length = 640
Score = 95.9 bits (203), Expect(3) = 1e-041
Identities = 40/80 (50%), Positives = 48/80 (60%)
Frame = -3 / -1
Query: 678 VLSETDFPNLPYLQAVVKESLRLHPPTPLMLPHRASASVKIAGYDIPKGXXXXXXXXXXA 499
++SETD N+ YL+AV+KESLRLHP PL+ PH A A I GY +P G
Sbjct: 502 IISETDMNNMTYLRAVIKESLRLHPVAPLLAPHLAMADCIIDGYIVPAGTRVVVNAWAIG 323
Query: 498 RDPEVWDSPLEFRPERFLRE 439
RDP W+ P EF PERF E
Sbjct: 322 RDPSSWEYPEEFIPERFTDE 263
Score = 79.0 bits (166), Expect(3) = 1e-041
Identities = 32/63 (50%), Positives = 42/63 (66%)
Frame = -3 / -1
Query: 438 NIDIKGADFRVLPFGAGRRVCPGAQLGINLVASMIGHMLHHFTWTLPSGTCPEDVSMMES 259
+I+ KG DF+ LPFGAGRR+CPG LGI V M+ +++ HF W LP G +D+ M E
Sbjct: 250 HINFKGNDFQFLPFGAGRRMCPGMNLGIANVELMLANLVCHFDWELPLGVGRKDIDMTEV 71
Query: 258 PGL 250
GL
Sbjct: 70 FGL 62
Score = 34.1 bits (68), Expect(3) = 1e-041
Identities = 14/37 (37%), Positives = 23/37 (62%)
Frame = -3 / -1
Query: 813 LWDMITAGTDTTVISV*WAMAELLRNPRVQEKLQEEL 703
L D+ DT+ + + +AEL+R P + EKLQ+E+
Sbjct: 640 LTDVFFGAIDTSANVLEFTLAELMRRPHMMEKLQDEV 530
>gb|AV936356.1|AV936356 AV936356 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal11a15 3', mRNA sequence
Length = 683
Score = 95.9 bits (203), Expect(3) = 1e-041
Identities = 40/80 (50%), Positives = 48/80 (60%)
Frame = -3 / -2
Query: 678 VLSETDFPNLPYLQAVVKESLRLHPPTPLMLPHRASASVKIAGYDIPKGXXXXXXXXXXA 499
++SETD N+ YL+AV+KESLRLHP PL+ PH A A I GY +P G
Sbjct: 568 IISETDMNNMTYLRAVIKESLRLHPVAPLLAPHLAMADCIIDGYIVPAGTRVVVNAWAIG 389
Query: 498 RDPEVWDSPLEFRPERFLRE 439
RDP W+ P EF PERF E
Sbjct: 388 RDPSSWEYPEEFIPERFTDE 329
Score = 81.3 bits (171), Expect(3) = 1e-041
Identities = 36/84 (42%), Positives = 49/84 (58%)
Frame = -3 / -2
Query: 438 NIDIKGADFRVLPFGAGRRVCPGAQLGINLVASMIGHMLHHFTWTLPSGTCPEDVSMMES 259
+I+ KG DF+ LPFGAGRR+CPG LGI V M+ +++ HF W LP G +D+ M E
Sbjct: 316 HINFKGNDFQFLPFGAGRRMCPGMNLGIANVELMLANLVCHFDWELPLGVGRKDIDMTEV 137
Query: 258 PGLVTFMATPLQAVATPRLDKEEL 187
GL L V R+ ++L
Sbjct: 136 FGLTVRRKEKLLLVPKSRM*SQKL 65
Score = 31.3 bits (62), Expect(3) = 1e-041
Identities = 12/28 (42%), Positives = 20/28 (71%)
Frame = -3 / -2
Query: 786 DTTVISV*WAMAELLRNPRVQEKLQEEL 703
DT+ + + +AEL+R P + EKLQ+E+
Sbjct: 679 DTSANVLEFTLAELMRRPHMMEKLQDEV 596
>gb|BF628635.2|BF628635 HVSMEb0006N15f Hordeum vulgare seedling shoot EST library
HVcDNA0002 (Dehydration stress) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEb0006N15f, mRNA sequence
Length = 710
Score = 91.8 bits (194), Expect(3) = 2e-041
Identities = 38/79 (48%), Positives = 50/79 (63%)
Frame = -3 / +2
Query: 678 VLSETDFPNLPYLQAVVKESLRLHPPTPLMLPHRASASVKIAGYDIPKGXXXXXXXXXXA 499
+++E D +L YL+AV+KE+LRLH P PL++PH A A I GY IP G A
Sbjct: 317 MVTEDDLNHLAYLKAVIKETLRLHMPAPLLVPHLAMADCVINGYTIPSGTRVIVNSRAIA 496
Query: 498 RDPEVWDSPLEFRPERFLR 442
RDP W+S EF PERF++
Sbjct: 497 RDPNSWESAEEFLPERFMQ 553
Score = 63.4 bits (132), Expect(3) = 2e-041
Identities = 22/46 (47%), Positives = 30/46 (65%)
Frame = -3 / +2
Query: 435 IDIKGADFRVLPFGAGRRVCPGAQLGINLVASMIGHMLHHFTWTLP 298
+D KG F LPFG GRR+CPG L I + M+ ++++HF W LP
Sbjct: 572 MDYKGNGFLYLPFGTGRRICPGINLAIGAIEIMLTNLVYHFDWKLP 709
Score = 52.8 bits (109), Expect(3) = 2e-041
Identities = 27/82 (32%), Positives = 45/82 (54%)
Frame = -3 / +2
Query: 948 DRLTVKIMEEHARALKQRGAQQHFVDALFTLRDKYDLSDDTVIGLLWDMITAGTDTTVIS 769
D L I E ++ G ++ L +++ +Y+L+ + V L M AGTDT+ I
Sbjct: 44 DLLESLIHEHESKPAPALGDDTDYIHDLLSIQKEYNLTREQVKAQLVIMFGAGTDTSYIV 223
Query: 768 V*WAMAELLRNPRVQEKLQEEL 703
+ +AMA L++NP + KLQ E+
Sbjct: 224 MEYAMARLMQNPDLMTKLQAEV 289
>gb|BJ548006.1|BJ548006 BJ548006 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal15n22 3', mRNA sequence
Length = 684
Score = 95.9 bits (203), Expect(3) = 3e-041
Identities = 40/80 (50%), Positives = 48/80 (60%)
Frame = -3 / -3
Query: 678 VLSETDFPNLPYLQAVVKESLRLHPPTPLMLPHRASASVKIAGYDIPKGXXXXXXXXXXA 499
++SETD N+ YL+AV+KESLRLHP PL+ PH A A I GY +P G
Sbjct: 568 IISETDMNNMTYLRAVIKESLRLHPVAPLLAPHLAMADCIIDGYIVPAGTRVVVNAWAIG 389
Query: 498 RDPEVWDSPLEFRPERFLRE 439
RDP W+ P EF PERF E
Sbjct: 388 RDPSSWEYPEEFIPERFTDE 329
Score = 81.3 bits (171), Expect(3) = 3e-041
Identities = 36/84 (42%), Positives = 49/84 (58%)
Frame = -3 / -3
Query: 438 NIDIKGADFRVLPFGAGRRVCPGAQLGINLVASMIGHMLHHFTWTLPSGTCPEDVSMMES 259
+I+ KG DF+ LPFGAGRR+CPG LGI V M+ +++ HF W LP G +D+ M E
Sbjct: 316 HINFKGNDFQFLPFGAGRRMCPGMNLGIANVELMLANLVCHFDWELPLGVGRKDIDMTEV 137
Query: 258 PGLVTFMATPLQAVATPRLDKEEL 187
GL L V R+ ++L
Sbjct: 136 FGLTVRRKEKLLLVPKSRM*SQKL 65
Score = 30.4 bits (60), Expect(3) = 3e-041
Identities = 12/28 (42%), Positives = 19/28 (67%)
Frame = -3 / -3
Query: 786 DTTVISV*WAMAELLRNPRVQEKLQEEL 703
DT+ + +AEL+R P + EKLQ+E+
Sbjct: 679 DTSANVXEFTLAELMRRPHMMEKLQDEV 596
>gb|AV936516.1|AV936516 AV936516 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal11k15 3', mRNA sequence
Length = 707
Score = 95.9 bits (203), Expect(3) = 5e-041
Identities = 40/80 (50%), Positives = 48/80 (60%)
Frame = -3 / -2
Query: 678 VLSETDFPNLPYLQAVVKESLRLHPPTPLMLPHRASASVKIAGYDIPKGXXXXXXXXXXA 499
++SETD N+ YL+AV+KESLRLHP PL+ PH A A I GY +P G
Sbjct: 589 IISETDMNNMTYLRAVIKESLRLHPVAPLLAPHLAMADCIIDGYIVPAGTRVVVNAWAIG 410
Query: 498 RDPEVWDSPLEFRPERFLRE 439
RDP W+ P EF PERF E
Sbjct: 409 RDPSSWEYPEEFIPERFTDE 350
Score = 81.3 bits (171), Expect(3) = 5e-041
Identities = 36/84 (42%), Positives = 49/84 (58%)
Frame = -3 / -2
Query: 438 NIDIKGADFRVLPFGAGRRVCPGAQLGINLVASMIGHMLHHFTWTLPSGTCPEDVSMMES 259
+I+ KG DF+ LPFGAGRR+CPG LGI V M+ +++ HF W LP G +D+ M E
Sbjct: 337 HINFKGNDFQFLPFGAGRRMCPGMNLGIANVELMLANLVCHFDWELPLGVGRKDIDMTEV 158
Query: 258 PGLVTFMATPLQAVATPRLDKEEL 187
GL L V R+ ++L
Sbjct: 157 FGLTVRRKEKLLLVPKSRM*SQKL 86
Score = 29.5 bits (58), Expect(3) = 5e-041
Identities = 10/20 (50%), Positives = 16/20 (80%)
Frame = -3 / -2
Query: 762 WAMAELLRNPRVQEKLQEEL 703
+ +AEL+R P + EKLQ+E+
Sbjct: 676 FTLAELMRRPHMMEKLQDEV 617
>gb|BI960706.1|BI960706 HVSMEn0001B07f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0001B07f, mRNA sequence
Length = 1300
Score = 167 bits (360), Expect = 8e-041
Identities = 67/149 (44%), Positives = 94/149 (63%)
Frame = -3 / +3
Query: 828 TVIGLLWDMITAGTDTTVISV*WAMAELLRNPRVQEKLQEELDRVVGRDRVLSETDFPNL 649
T++ LL D+ +AGTDT+ +V WAMAELL NP + +EELD+V+G + E+D L
Sbjct: 132 TLLSLLSDLFSAGTDTSSATVEWAMAELLLNPSSMSRAREELDQVIGSKEQVEESDIGQL 311
Query: 648 PYLQAVVKESLRLHPPTPLMLPHRASASVKIAGYDIPKGXXXXXXXXXXARDPEVWDSPL 469
YLQA+VKE+ RLHPP P +LPH A + ++ GY + KG D +VW P
Sbjct: 312 KYLQAIVKETFRLHPPAPFLLPHVAETTTQVQGYTVAKGTRLLVNVWAIGHDXKVWPEPE 491
Query: 468 EFRPERFLRENIDIKGADFRVLPFGAGRR 382
+F PE+FL + +D+ G D +LPFG+ RR
Sbjct: 492 KFMPEKFLEKEVDLNGPDL*LLPFGSRRR 578
>gb|AV936349.1|AV936349 AV936349 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal11a04 3', mRNA sequence
Length = 668
Score = 95.9 bits (203), Expect(3) = 1e-040
Identities = 40/80 (50%), Positives = 48/80 (60%)
Frame = -3 / -1
Query: 678 VLSETDFPNLPYLQAVVKESLRLHPPTPLMLPHRASASVKIAGYDIPKGXXXXXXXXXXA 499
++SETD N+ YL+AV+KESLRLHP PL+ PH A A I GY +P G
Sbjct: 590 IISETDMNNMTYLRAVIKESLRLHPVAPLLAPHLAMADCIIDGYIVPAGTRVVVNAWAIG 411
Query: 498 RDPEVWDSPLEFRPERFLRE 439
RDP W+ P EF PERF E
Sbjct: 410 RDPSSWEYPEEFIPERFTDE 351
Score = 81.3 bits (171), Expect(3) = 1e-040
Identities = 36/84 (42%), Positives = 49/84 (58%)
Frame = -3 / -1
Query: 438 NIDIKGADFRVLPFGAGRRVCPGAQLGINLVASMIGHMLHHFTWTLPSGTCPEDVSMMES 259
+I+ KG DF+ LPFGAGRR+CPG LGI V M+ +++ HF W LP G +D+ M E
Sbjct: 338 HINFKGNDFQFLPFGAGRRMCPGMNLGIANVELMLANLVCHFDWELPLGVGRKDIDMTEV 159
Query: 258 PGLVTFMATPLQAVATPRLDKEEL 187
GL L V R+ ++L
Sbjct: 158 FGLTVRRKEKLLLVPKSRM*SQKL 87
Score = 28.1 bits (55), Expect(3) = 1e-040
Identities = 10/17 (58%), Positives = 14/17 (82%)
Frame = -3 / -1
Query: 753 AELLRNPRVQEKLQEEL 703
AEL+R P + EKLQ+E+
Sbjct: 668 AELMRRPHMMEKLQDEV 618
>gb|BJ548998.1|BJ548998 BJ548998 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal16j19 3', mRNA sequence
Length = 669
Score = 95.9 bits (203), Expect(3) = 1e-040
Identities = 40/80 (50%), Positives = 48/80 (60%)
Frame = -3 / -2
Query: 678 VLSETDFPNLPYLQAVVKESLRLHPPTPLMLPHRASASVKIAGYDIPKGXXXXXXXXXXA 499
++SETD N+ YL+AV+KESLRLHP PL+ PH A A I GY +P G
Sbjct: 590 IISETDMNNMTYLRAVIKESLRLHPVAPLLAPHLAMADCIIDGYIVPAGTRVVVNAWAIG 411
Query: 498 RDPEVWDSPLEFRPERFLRE 439
RDP W+ P EF PERF E
Sbjct: 410 RDPSSWEYPEEFIPERFTDE 351
Score = 81.3 bits (171), Expect(3) = 1e-040
Identities = 36/84 (42%), Positives = 49/84 (58%)
Frame = -3 / -2
Query: 438 NIDIKGADFRVLPFGAGRRVCPGAQLGINLVASMIGHMLHHFTWTLPSGTCPEDVSMMES 259
+I+ KG DF+ LPFGAGRR+CPG LGI V M+ +++ HF W LP G +D+ M E
Sbjct: 338 HINFKGNDFQFLPFGAGRRMCPGMNLGIANVELMLANLVCHFDWELPLGVGRKDIDMTEV 159
Query: 258 PGLVTFMATPLQAVATPRLDKEEL 187
GL L V R+ ++L
Sbjct: 158 FGLTVRRKEKLLLVPKSRM*SQKL 87
Score = 28.1 bits (55), Expect(3) = 1e-040
Identities = 10/17 (58%), Positives = 14/17 (82%)
Frame = -3 / -2
Query: 753 AELLRNPRVQEKLQEEL 703
AEL+R P + EKLQ+E+
Sbjct: 668 AELMRRPHMMEKLQDEV 618
>gb|CA030582.1|CA030582 HX07H18r HX Hordeum vulgare subsp. vulgare cDNA clone HX07H18
5-PRIME, mRNA sequence
Length = 616
Score = 115 bits (245), Expect(3) = 1e-040
Identities = 48/105 (45%), Positives = 70/105 (66%)
Frame = -3 / +2
Query: 879 FVDALFTLRDKYDLSDDTVIGLLWDMITAGTDTTVISV*WAMAELLRNPRVQEKLQEELD 700
F D L +L+ L+D +I +LW+M+ GTDT + + W +A L+ + VQ ++ EELD
Sbjct: 74 FTDVLLSLQGGDKLADADMIAVLWEMVFRGTDTVAVLMEWVLARLVLHRDVQARVHEELD 253
Query: 699 RVVGRDRVLSETDFPNLPYLQAVVKESLRLHPPTPLMLPHRASAS 565
RVVGRDR + E+D +L YL AV+KE+LR+HPP PL+ R + S
Sbjct: 254 RVVGRDRAVDESDAASLAYLHAVIKETLRVHPPGPLLSWARLATS 388
Score = 48.3 bits (99), Expect(3) = 1e-040
Identities = 18/44 (40%), Positives = 25/44 (56%)
Frame = -3 / +2
Query: 576 ASASVKIAGYDIPKGXXXXXXXXXXARDPEVWDSPLEFRPERFL 445
A++ V++ G+ IP G DP+VW P EFRPERF+
Sbjct: 380 ATSDVRVDGFLIPAGTTAMVNMWAITHDPDVWAEPEEFRPERFV 511
Score = 41.8 bits (85), Expect(3) = 1e-040
Identities = 14/27 (51%), Positives = 19/27 (70%)
Frame = -3 / +2
Query: 435 IDIKGADFRVLPFGAGRRVCPGAQLGI 355
+ + G+D R+ PFGAGRR CPG L +
Sbjct: 533 LSVMGSDLRLAPFGAGRRSCPGKSLAM 613
>gb|AV921112.1|AV921112 AV921112 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags1a14 3', mRNA sequence
Length = 746
Score = 90.4 bits (191), Expect(3) = 2e-040
Identities = 38/76 (50%), Positives = 47/76 (61%)
Frame = -3 / -1
Query: 669 ETDFPNLPYLQAVVKESLRLHPPTPLMLPHRASASVKIAGYDIPKGXXXXXXXXXXARDP 490
E D +L YL+AV+KE+LRLH P PL++PH A A I GY IP G ARDP
Sbjct: 611 EDDLNHLAYLKAVIKETLRLHMPAPLLVPHLAMADCVINGYTIPSGTRVIVNSRAIARDP 432
Query: 489 EVWDSPLEFRPERFLR 442
W+S EF PERF++
Sbjct: 431 SSWESAEEFLPERFMQ 384
Score = 75.8 bits (159), Expect(3) = 2e-040
Identities = 32/81 (39%), Positives = 42/81 (51%)
Frame = -3 / -1
Query: 435 IDIKGADFRVLPFGAGRRVCPGAQLGINLVASMIGHMLHHFTWTLPSGTCPEDVSMMESP 256
+D KG F LPFG GRR+CPG I + M+ ++++HF W LP G+ +SM ES
Sbjct: 365 MDYKGNGFLYLPFGTGRRICPGINFAIAAIEIMLANLVYHFDWKLPPGSAERGISMTESF 186
Query: 255 GLVTFMATPLQAVATPRLDKE 193
GL L V D E
Sbjct: 185 GLTVHRKDKLLLVPLVPQDYE 123
Score = 38.2 bits (77), Expect(3) = 2e-040
Identities = 16/31 (51%), Positives = 23/31 (74%)
Frame = -3 / -1
Query: 795 AGTDTTVISV*WAMAELLRNPRVQEKLQEEL 703
AGTDT+ I + +AMA L++NP + KLQ E+
Sbjct: 740 AGTDTSYIVMEYAMARLMQNPDLMTKLQAEV 648
>gb|BJ545191.1|BJ545191 BJ545191 K. Sato unpublished cDNA library, cv. Akashinriki
vegetative stage leaves Hordeum vulgare subsp. vulgare
cDNA clone baak45m01 5', mRNA sequence
Length = 603
Score = 166 bits (356), Expect = 3e-040
Identities = 66/149 (44%), Positives = 93/149 (62%)
Frame = -3 / +3
Query: 816 LLWDMITAGTDTTVISV*WAMAELLRNPRVQEKLQEELDRVVGRDRVLSETDFPNLPYLQ 637
++ D+ AG++T+ ++ WAM+EL+R P V K Q E+ + ++E D NL YL+
Sbjct: 144 VILDLFGAGSETSATTLQWAMSELMRYPNVMLKAQAEVRNNLQGKSKVTEDDLANLKYLR 323
Query: 636 AVVKESLRLHPPTPLMLPHRASASVKIAGYDIPKGXXXXXXXXXXARDPEVWDSPLEFRP 457
V+KE++RLHP PL+LP A + KI GYDIP+G RDP+ W P EF+P
Sbjct: 324 LVIKETMRLHPAAPLLLPREAMEACKILGYDIPEGTTVLVNAWAIGRDPKYWQDPEEFKP 503
Query: 456 ERFLRENIDIKGADFRVLPFGAGRRVCPG 370
ERF +D KG +F +PFGAGRR+CPG
Sbjct: 504 ERFESGMVDFKGTNFEYIPFGAGRRMCPG 590
>gb|BJ466861.1|BJ466861 BJ466861 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags34j09 3', mRNA sequence
Length = 719
Score = 92.3 bits (195), Expect(3) = 6e-040
Identities = 37/77 (48%), Positives = 47/77 (61%)
Frame = -3 / -3
Query: 675 LSETDFPNLPYLQAVVKESLRLHPPTPLMLPHRASASVKIAGYDIPKGXXXXXXXXXXAR 496
+++ D LPYL+AV+KE+LRLH P PLM+PH + I GY IP G R
Sbjct: 567 VTQDDLHGLPYLKAVIKETLRLHMPGPLMVPHLSMDECIINGYTIPSGTRTFINTYAIQR 388
Query: 495 DPEVWDSPLEFRPERFL 445
DP W+SP EF PERF+
Sbjct: 387 DPSNWESPEEFMPERFM 337
Score = 69.8 bits (146), Expect(3) = 6e-040
Identities = 25/62 (40%), Positives = 39/62 (62%)
Frame = -3 / -3
Query: 435 IDIKGADFRVLPFGAGRRVCPGAQLGINLVASMIGHMLHHFTWTLPSGTCPEDVSMMESP 256
+D KG DF+ PFG+GRR+CPG + M+ ++++HF W LP + E ++M E+
Sbjct: 315 MDYKGNDFQYFPFGSGRRICPGINFATATIQLMLTNLMYHFDWKLPPESEEEGINMTETF 136
Query: 255 GL 250
GL
Sbjct: 135 GL 130
Score = 40.9 bits (83), Expect(3) = 6e-040
Identities = 17/42 (40%), Positives = 26/42 (61%)
Frame = -3 / -3
Query: 804 MITAGTDTTVISV*WAMAELLRNPRVQEKLQEELDRVVGRDR 679
M AGTDT+ I + +AM L++NPRV LQ E+ + + +
Sbjct: 699 MFEAGTDTSTIVLEYAMVRLMQNPRVMAMLQAEVRSTIPKGK 574
>gb|BE215637.1|BE215637 HV_CEb0007H18f Hordeum vulgare seedling green leaf EST library
HVcDNA0005 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEb0007H18f, mRNA sequence
Length = 531
Score = 163 bits (351), Expect = 1e-039
Identities = 65/149 (43%), Positives = 93/149 (62%)
Frame = -3 / +3
Query: 816 LLWDMITAGTDTTVISV*WAMAELLRNPRVQEKLQEELDRVVGRDRVLSETDFPNLPYLQ 637
LL D+ +AG++T+ ++ WAM+EL+RNP K Q E+ + ++E D +L Y++
Sbjct: 51 LLVDLFSAGSETSATTLAWAMSELMRNPGAMAKAQAEVRNNLQGKPRVTEDDLADLKYMR 230
Query: 636 AVVKESLRLHPPTPLMLPHRASASVKIAGYDIPKGXXXXXXXXXXARDPEVWDSPLEFRP 457
V+KE+LRLH PL+LP + + K+ GYD+PKG RDP+ WD+ EFRP
Sbjct: 231 LVIKETLRLHTSVPLLLPREPTEACKVLGYDVPKGATVFVNAWAICRDPKHWDAAEEFRP 410
Query: 456 ERFLRENIDIKGADFRVLPFGAGRRVCPG 370
ERF +D KG +F PFGAGRR+CPG
Sbjct: 411 ERFESGEVDFKGTNFEYTPFGAGRRICPG 497
>gb|BI958239.1|BI958239 HVSMEn0014A11f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0014A11f, mRNA sequence
Length = 674
Score = 161 bits (346), Expect = 6e-039
Identities = 69/143 (48%), Positives = 94/143 (65%)
Frame = -3 / +1
Query: 873 DALFTLRDKYDLSDDTVIGLLWDMITAGTDTTVISV*WAMAELLRNPRVQEKLQEELDRV 694
D T ++ ++D V L+ ++ AGT+TT V WA+AEL+R+P + ++ QEELD V
Sbjct: 76 DKSLTGGEEDKITDTDVKALILNLFVAGTETTSTMVEWAVAELIRHPDMLKRAQEELDAV 255
Query: 693 VGRDRVLSETDFPNLPYLQAVVKESLRLHPPTPLMLPHRASASVKIAGYDIPKGXXXXXX 514
VGRD++++E+D P L +L AV+KE+ RLHP TPL LP AS ++AGY IPKG
Sbjct: 256 VGRDKLVAESDLPRLAFLGAVIKETFRLHPSTPLSLPRMASEECEVAGYRIPKGTELLVN 435
Query: 513 XXXXARDPEVWDSPLEFRPERFL 445
ARDP +W PLEFRP RFL
Sbjct: 436 VWGIARDPALWPDPLEFRPARFL 504
>gb|AV921067.1|AV921067 AV921067 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags16m22 3', mRNA sequence
Length = 493
Score = 160 bits (344), Expect = 1e-038
Identities = 64/77 (83%), Positives = 70/77 (90%)
Frame = -3 / -2
Query: 387 RRVCPGAQLGINLVASMIGHMLHHFTWTLPSGTCPEDVSMMESPGLVTFMATPLQAVATP 208
RRVCPGAQLGINLVASMIGHMLHHF W+LP GT PED+SMMESPGLVTFM TPLQA+ATP
Sbjct: 492 RRVCPGAQLGINLVASMIGHMLHHFKWSLPXGTRPEDISMMESPGLVTFMGTPLQAIATP 313
Query: 207 RLDKEELYRRVPSDV*A 157
RL+K ELY RVP ++*A
Sbjct: 312 RLEKXELYXRVPVEI*A 262
Score = 140 bits (300), Expect = 1e-032
Identities = 59/77 (76%), Positives = 62/77 (80%)
Frame = +2 / +2
Query: 158 AHTSEGTRLYSSSLSRRGVATACSGVAMKVTSPGDSIMLTSSGQVPLGSVHVKWCSMWPI 337
A S GT LYSS SRRGVA ACSGV MKVTSPGDSIML SSG VP G H+KWC+M PI
Sbjct: 263 AQISTGTLLYSSXFSRRGVAMACSGVPMKVTSPGDSIMLMSSGLVPXGRDHLKWCNMCPI 442
Query: 338 MDATRLIPSCAPGHTRR 388
M+ATRLIPSCAPGHT R
Sbjct: 443 MEATRLIPSCAPGHTLR 493
Score = 109 bits (233), Expect = 2e-023
Identities = 49/75 (65%), Positives = 52/75 (69%)
Frame = +1 / +1
Query: 160 SHVRRDTPVQLLLVQARRGDGLQRRGHEGDEXXXXXXXXXXXXXXXRQRPREVVQHVADH 339
S + RD VQLLL+QARRGDGLQRR HEGDE RQRP E+VQHV DH
Sbjct: 265 SDLNRDPXVQLLLLQARRGDGLQRRAHEGDEPGGLHHANVLRPGAXRQRPLEMVQHVPDH 444
Query: 340 GRHEVDPELRAGAHP 384
G EVDPELRAGAHP
Sbjct: 445 GGDEVDPELRAGAHP 489
>gb|AV919647.1|AV919647 AV919647 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags6p16 3', mRNA sequence
Length = 703
Score = 92.3 bits (195), Expect(3) = 5e-038
Identities = 37/77 (48%), Positives = 47/77 (61%)
Frame = -3 / -2
Query: 675 LSETDFPNLPYLQAVVKESLRLHPPTPLMLPHRASASVKIAGYDIPKGXXXXXXXXXXAR 496
+++ D LPYL+AV+KE+LRLH P PLM+PH + I GY IP G R
Sbjct: 585 VTQDDLHGLPYLKAVIKETLRLHMPGPLMVPHLSMDECIINGYTIPSGTRTFINTYAIQR 406
Query: 495 DPEVWDSPLEFRPERFL 445
DP W+SP EF PERF+
Sbjct: 405 DPSNWESPEEFMPERFM 355
Score = 69.8 bits (146), Expect(3) = 5e-038
Identities = 25/62 (40%), Positives = 39/62 (62%)
Frame = -3 / -2
Query: 435 IDIKGADFRVLPFGAGRRVCPGAQLGINLVASMIGHMLHHFTWTLPSGTCPEDVSMMESP 256
+D KG DF+ PFG+GRR+CPG + M+ ++++HF W LP + E ++M E+
Sbjct: 333 MDYKGNDFQYFPFGSGRRICPGINFATATIQLMLTNLMYHFDWKLPPESEEEGINMTETF 154
Query: 255 GL 250
GL
Sbjct: 153 GL 148
Score = 34.5 bits (69), Expect(3) = 5e-038
Identities = 14/37 (37%), Positives = 23/37 (62%)
Frame = -3 / -2
Query: 789 TDTTVISV*WAMAELLRNPRVQEKLQEELDRVVGRDR 679
TDT+ I + +AM L++NPRV LQ E+ + + +
Sbjct: 702 TDTSTIVLEYAMVRLMQNPRVMAMLQAEVRSTIPKGK 592
>gb|BE519743.1|BE519743 HV_CEb0021A21f Hordeum vulgare seedling green leaf EST library
HVcDNA0005 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEb0021A21f, mRNA sequence
Length = 627
Score = 77.6 bits (163), Expect(3) = 5e-038
Identities = 29/69 (42%), Positives = 41/69 (59%)
Frame = -3 / +2
Query: 423 GADFRVLPFGAGRRVCPGAQLGINLVASMIGHMLHHFTWTLPSGTCPEDVSMMESPGLVT 244
G DF ++PFG GRR+CPG L L+ ++G +LH F W LP+ + M E G+V
Sbjct: 374 GQDFEMIPFGLGRRICPGMPLAQKLIPLILGTLLHRFEWELPADVKETGIDMTEKCGVVL 553
Query: 243 FMATPLQAV 217
+ TPL A+
Sbjct: 554 SLITPLTAI 580
Score = 70.7 bits (148), Expect(3) = 5e-038
Identities = 29/58 (50%), Positives = 38/58 (65%)
Frame = -3 / +2
Query: 762 WAMAELLRNPRVQEKLQEELDRVVGRDRVLSETDFPNLPYLQAVVKESLRLHPPTPLM 589
W M +LL+NP V K++EEL V+G ++ E+D LPYLQAV KE LRL PL+
Sbjct: 23 WGMVDLLQNPEVMRKVKEELTTVLGEKPLMEESDIGRLPYLQAVAKEILRLRMVVPLV 196
Score = 48.3 bits (99), Expect(3) = 5e-038
Identities = 17/49 (34%), Positives = 27/49 (55%)
Frame = -3 / +2
Query: 591 MLPHRASASVKIAGYDIPKGXXXXXXXXXXARDPEVWDSPLEFRPERFL 445
++P +A A +++ GY IPKG R+ + W P +F PERF+
Sbjct: 191 LVPRKAEADIEVNGYRIPKGTNVILNAWAINRNADAWSDPDKFVPERFI 337
>gb|BU999462.1|BU999462 HI14J11r HI Hordeum vulgare subsp. vulgare cDNA clone HI14J11
5-PRIME, mRNA sequence
Length = 595
Score = 114 bits (243), Expect(2) = 7e-038
Identities = 47/111 (42%), Positives = 63/111 (56%)
Frame = -3 / +2
Query: 813 LWDMITAGTDTTVISV*WAMAELLRNPRVQEKLQEELDRVVGRDRVLSETDFPNLPYLQA 634
L D G T+ +++ WAM EL+R+PRV K+Q E+ V GR + D P L YL+
Sbjct: 2 LMDTFIGGNHTSSVTINWAMTELIRHPRVLSKVQGEIRAVGGRSDRMQHDDMPKLQYLRM 181
Query: 633 VVKESLRLHPPTPLMLPHRASASVKIAGYDIPKGXXXXXXXXXXARDPEVW 481
VVKE+LRLHPP L++P +++AGYDIP RDP VW
Sbjct: 182 VVKETLRLHPPATLLVPRETIRRIQVAGYDIPAKTKIIVNTWAIGRDPSVW 334
Score = 63.8 bits (133), Expect(2) = 7e-038
Identities = 24/43 (55%), Positives = 29/43 (67%)
Frame = -3 / +2
Query: 480 DSPLEFRPERFLRENIDIKGADFRVLPFGAGRRVCPGAQLGIN 352
D P EF PERF +ID GA F +LPFG GRRVCPG + ++
Sbjct: 338 DDPEEFYPERFQDTDIDFSGAHFELLPFGTGRRVCPGLAMAVS 466
>gb|BJ548975.1|BJ548975 BJ548975 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal40l11 3', mRNA sequence
Length = 696
Score = 95.9 bits (203), Expect(2) = 1e-037
Identities = 40/80 (50%), Positives = 48/80 (60%)
Frame = -3 / -1
Query: 678 VLSETDFPNLPYLQAVVKESLRLHPPTPLMLPHRASASVKIAGYDIPKGXXXXXXXXXXA 499
++SETD N+ YL+AV+KESLRLHP PL+ PH A A I GY +P G
Sbjct: 582 IISETDMNNMTYLRAVIKESLRLHPVAPLLAPHLAMADCIIDGYIVPAGTRVVVNAWAIG 403
Query: 498 RDPEVWDSPLEFRPERFLRE 439
RDP W+ P EF PERF E
Sbjct: 402 RDPSSWEYPEEFIPERFTDE 343
Score = 81.3 bits (171), Expect(2) = 1e-037
Identities = 36/84 (42%), Positives = 49/84 (58%)
Frame = -3 / -1
Query: 438 NIDIKGADFRVLPFGAGRRVCPGAQLGINLVASMIGHMLHHFTWTLPSGTCPEDVSMMES 259
+I+ KG DF+ LPFGAGRR+CPG LGI V M+ +++ HF W LP G +D+ M E
Sbjct: 330 HINFKGNDFQFLPFGAGRRMCPGMNLGIANVELMLANLVCHFDWELPLGVGRKDIDMTEV 151
Query: 258 PGLVTFMATPLQAVATPRLDKEEL 187
GL L V R+ ++L
Sbjct: 150 FGLTVRRKEKLLLVPKSRM*SQKL 79
>gb|BJ547960.1|BJ547960 BJ547960 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal12i23 3', mRNA sequence
Length = 669
Score = 95.9 bits (203), Expect(2) = 1e-037
Identities = 40/80 (50%), Positives = 48/80 (60%)
Frame = -3 / -3
Query: 678 VLSETDFPNLPYLQAVVKESLRLHPPTPLMLPHRASASVKIAGYDIPKGXXXXXXXXXXA 499
++SETD N+ YL+AV+KESLRLHP PL+ PH A A I GY +P G
Sbjct: 595 IISETDMNNMTYLRAVIKESLRLHPVAPLLAPHLAMADCIIDGYIVPAGTRVVVNAWAIG 416
Query: 498 RDPEVWDSPLEFRPERFLRE 439
RDP W+ P EF PERF E
Sbjct: 415 RDPSSWEYPEEFIPERFTDE 356
Score = 81.3 bits (171), Expect(2) = 1e-037
Identities = 36/84 (42%), Positives = 49/84 (58%)
Frame = -3 / -3
Query: 438 NIDIKGADFRVLPFGAGRRVCPGAQLGINLVASMIGHMLHHFTWTLPSGTCPEDVSMMES 259
+I+ KG DF+ LPFGAGRR+CPG LGI V M+ +++ HF W LP G +D+ M E
Sbjct: 343 HINFKGNDFQFLPFGAGRRMCPGMNLGIANVELMLANLVCHFDWELPLGVGRKDIDMTEV 164
Query: 258 PGLVTFMATPLQAVATPRLDKEEL 187
GL L V R+ ++L
Sbjct: 163 FGLTVRRKEKLLLVPKSRM*SQKL 92
>gb|BJ548386.1|BJ548386 BJ548386 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal24a03 3', mRNA sequence
Length = 645
Score = 95.9 bits (203), Expect(2) = 1e-037
Identities = 40/80 (50%), Positives = 48/80 (60%)
Frame = -3 / -2
Query: 678 VLSETDFPNLPYLQAVVKESLRLHPPTPLMLPHRASASVKIAGYDIPKGXXXXXXXXXXA 499
++SETD N+ YL+AV+KESLRLHP PL+ PH A A I GY +P G
Sbjct: 569 IISETDMNNMTYLRAVIKESLRLHPVAPLLAPHLAMADCIIDGYIVPAGTRVVVNAWAIG 390
Query: 498 RDPEVWDSPLEFRPERFLRE 439
RDP W+ P EF PERF E
Sbjct: 389 RDPSSWEYPEEFIPERFTDE 330
Score = 81.3 bits (171), Expect(2) = 1e-037
Identities = 36/84 (42%), Positives = 49/84 (58%)
Frame = -3 / -2
Query: 438 NIDIKGADFRVLPFGAGRRVCPGAQLGINLVASMIGHMLHHFTWTLPSGTCPEDVSMMES 259
+I+ KG DF+ LPFGAGRR+CPG LGI V M+ +++ HF W LP G +D+ M E
Sbjct: 317 HINFKGNDFQFLPFGAGRRMCPGMNLGIANVELMLANLVCHFDWELPLGVGRKDIDMTEV 138
Query: 258 PGLVTFMATPLQAVATPRLDKEEL 187
GL L V R+ ++L
Sbjct: 137 FGLTVRRKEKLLLVPKSRM*SQKL 66
>gb|AV935198.1|AV935198 AV935198 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal3e02 3', mRNA sequence
Length = 597
Score = 95.9 bits (203), Expect(2) = 1e-037
Identities = 40/80 (50%), Positives = 48/80 (60%)
Frame = -3 / -3
Query: 678 VLSETDFPNLPYLQAVVKESLRLHPPTPLMLPHRASASVKIAGYDIPKGXXXXXXXXXXA 499
++SETD N+ YL+AV+KESLRLHP PL+ PH A A I GY +P G
Sbjct: 589 IISETDMNNMTYLRAVIKESLRLHPVAPLLAPHLAMADCIIDGYIVPAGTRVVVNAWAIG 410
Query: 498 RDPEVWDSPLEFRPERFLRE 439
RDP W+ P EF PERF E
Sbjct: 409 RDPSSWEYPEEFIPERFTDE 350
Score = 81.3 bits (171), Expect(2) = 1e-037
Identities = 36/84 (42%), Positives = 49/84 (58%)
Frame = -3 / -3
Query: 438 NIDIKGADFRVLPFGAGRRVCPGAQLGINLVASMIGHMLHHFTWTLPSGTCPEDVSMMES 259
+I+ KG DF+ LPFGAGRR+CPG LGI V M+ +++ HF W LP G +D+ M E
Sbjct: 337 HINFKGNDFQFLPFGAGRRMCPGMNLGIANVELMLANLVCHFDWELPLGVGRKDIDMTEV 158
Query: 258 PGLVTFMATPLQAVATPRLDKEEL 187
GL L V R+ ++L
Sbjct: 157 FGLTVRRKEKLLLVPKSRM*SQKL 86
>gb|BJ544646.1|BJ544646 BJ544646 K. Sato unpublished cDNA library, cv. Akashinriki
vegetative stage leaves Hordeum vulgare subsp. vulgare
cDNA clone baak33l17 5', mRNA sequence
Length = 689
Score = 92.3 bits (195), Expect(3) = 1e-037
Identities = 39/80 (48%), Positives = 47/80 (58%)
Frame = -3 / +2
Query: 678 VLSETDFPNLPYLQAVVKESLRLHPPTPLMLPHRASASVKIAGYDIPKGXXXXXXXXXXA 499
++SETD N+ YL+AV+KESLRL P PL+ PH A A I GY +P G
Sbjct: 329 IISETDMNNMTYLRAVIKESLRLRPVAPLLAPHLAMADCIIDGYIVPAGTRVVVNAWAIG 508
Query: 498 RDPEVWDSPLEFRPERFLRE 439
RDP W+ P EF PERF E
Sbjct: 509 RDPSSWEYPEEFIPERFTDE 568
Score = 52.8 bits (109), Expect(3) = 1e-037
Identities = 21/35 (60%), Positives = 26/35 (74%)
Frame = -3 / +2
Query: 438 NIDIKGADFRVLPFGAGRRVCPGAQLGINLVASMI 334
+I+ KG DF+ LPFGAGRR+CPG LGI V M+
Sbjct: 581 HINFKGNDFQFLPFGAGRRMCPGMNLGIANVELML 685
Score = 50.1 bits (103), Expect(3) = 1e-037
Identities = 23/74 (31%), Positives = 41/74 (55%)
Frame = -3 / +2
Query: 912 RALKQRGAQQHFVDALFTLRDKYDLSDDTVIGLLWDMITAGTDTTVISV*WAMAELLRNP 733
R L FVD + +++ +Y L+ + + LL D+ DT+ + + +AEL+R P
Sbjct: 92 RKLASDHKDDDFVDIMLSVQQEYALTREHMKALLTDVFFGAIDTSANVLEFTLAELMRRP 271
Query: 732 RVQEKLQEELDRVV 691
+ EKLQ+E+ +V
Sbjct: 272 HMMEKLQDEVRGIV 313
>gb|BI956493.1|BI956493 HVSMEn0003M04f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0003M04f, mRNA sequence
Length = 942
Score = 156 bits (336), Expect = 2e-037
Identities = 66/143 (46%), Positives = 92/143 (64%)
Frame = -3 / +2
Query: 873 DALFTLRDKYDLSDDTVIGLLWDMITAGTDTTVISV*WAMAELLRNPRVQEKLQEELDRV 694
D T ++ ++D V L+ ++ AGT+TT V WA+AEL+R+P + ++ EELD V
Sbjct: 17 DKSLTGGEEDKITDTDVKALILNLFVAGTETTSTIVEWAVAELIRHPDMLKRAHEELDAV 196
Query: 693 VGRDRVLSETDFPNLPYLQAVVKESLRLHPPTPLMLPHRASASVKIAGYDIPKGXXXXXX 514
VGRD++++E+D P L +L AV+KE+ RLHP TPL LP AS ++AGY IPKG
Sbjct: 197 VGRDKLVAESDLPRLAFLGAVIKETFRLHPSTPLSLPRMASQECEVAGYRIPKGTELLVN 376
Query: 513 XXXXARDPEVWDSPLEFRPERFL 445
RDP +W PLEF+P RFL
Sbjct: 377 VWGITRDPALWPDPLEFQPARFL 445
>gb|BF629412.3|BF629412 HVSMEb0012D18f Hordeum vulgare seedling shoot EST library
HVcDNA0002 (Dehydration stress) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEb0012D18f, mRNA sequence
Length = 846
Score = 155 bits (332), Expect = 5e-037
Identities = 64/180 (35%), Positives = 94/180 (52%)
Frame = -3 / +2
Query: 831 DTVIGLLWDMITAGTDTTVISV*WAMAELLRNPRVQEKLQEELDRVVGRDRVLSETDFPN 652
D +L+D A TDT+ IS W M EL+R+PRV K Q E+ G + +D P
Sbjct: 143 DHAKSILFDTFMAATDTSSISSYWVMTELIRHPRVLHKAQAEVRAAAGGAPQVRISDMPK 322
Query: 651 LPYLQAVVKESLRLHPPTPLMLPHRASASVKIAGYDIPKGXXXXXXXXXXARDPEVWDSP 472
L YL+ V+ E+ R+HPP +++P +++ GYDIP RDP W P
Sbjct: 323 LKYLRMVLSETFRMHPPATMLVPRETMRPIRLGGYDIPANTMLMVNAWAIGRDPASWKDP 502
Query: 471 LEFRPERFLRENIDIKGADFRVLPFGAGRRVCPGAQLGINLVASMIGHMLHHFTWTLPSG 292
F ERF ++D G + +LPF AGRR+CP +G+ ++ ++L+ W PSG
Sbjct: 503 EVFYLERFEELDVDFNGGHYELLPFXAGRRICPVLAMGVANTEFILXNLLYCLNWAPPSG 682
>gb|AV913934.1|AV913934 AV913934 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags23m23 5', mRNA sequence
Length = 660
Score = 92.3 bits (195), Expect(3) = 8e-037
Identities = 37/77 (48%), Positives = 47/77 (61%)
Frame = -3 / +2
Query: 675 LSETDFPNLPYLQAVVKESLRLHPPTPLMLPHRASASVKIAGYDIPKGXXXXXXXXXXAR 496
+++ D LPYL+AV+KE+LRLH P PLM+PH + I GY IP G R
Sbjct: 134 VTQDDLHGLPYLKAVIKETLRLHMPGPLMVPHLSMDECIINGYTIPSGTRTFINTYAIQR 313
Query: 495 DPEVWDSPLEFRPERFL 445
DP W+SP EF PERF+
Sbjct: 314 DPSNWESPEEFMPERFM 364
Score = 69.8 bits (146), Expect(3) = 8e-037
Identities = 25/62 (40%), Positives = 39/62 (62%)
Frame = -3 / +2
Query: 435 IDIKGADFRVLPFGAGRRVCPGAQLGINLVASMIGHMLHHFTWTLPSGTCPEDVSMMESP 256
+D KG DF+ PFG+GRR+CPG + M+ ++++HF W LP + E ++M E+
Sbjct: 386 MDYKGNDFQYFPFGSGRRICPGINFATATIQLMLTNLMYHFDWKLPPESEEEGINMTETF 565
Query: 255 GL 250
GL
Sbjct: 566 GL 571
Score = 30.4 bits (60), Expect(3) = 8e-037
Identities = 13/39 (33%), Positives = 22/39 (56%)
Frame = -3 / +2
Query: 795 AGTDTTVISV*WAMAELLRNPRVQEKLQEELDRVVGRDR 679
AGT + + +AM L++NPRV LQ E+ + + +
Sbjct: 11 AGTXHIXLVLEYAMVRLMQNPRVMAMLQAEVRSTIPKGK 127
>gb|AV916927.1|AV916927 AV916927 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags20c01 5', mRNA sequence
Length = 533
Score = 92.3 bits (195), Expect(3) = 3e-036
Identities = 37/77 (48%), Positives = 47/77 (61%)
Frame = -3 / +1
Query: 675 LSETDFPNLPYLQAVVKESLRLHPPTPLMLPHRASASVKIAGYDIPKGXXXXXXXXXXAR 496
+++ D LPYL+AV+KE+LRLH P PLM+PH + I GY IP G R
Sbjct: 148 VTQDDLHGLPYLKAVIKETLRLHMPGPLMVPHLSMDECIINGYTIPSGTRTFINTYAIQR 327
Query: 495 DPEVWDSPLEFRPERFL 445
DP W+SP EF PERF+
Sbjct: 328 DPSNWESPEEFMPERFM 378
Score = 57.4 bits (119), Expect(3) = 3e-036
Identities = 18/43 (41%), Positives = 28/43 (65%)
Frame = -3 / +1
Query: 435 IDIKGADFRVLPFGAGRRVCPGAQLGINLVASMIGHMLHHFTW 307
+D KG DF+ PFG+GRR+CPG + M+ ++++HF W
Sbjct: 400 MDYKGNDFQYFPFGSGRRICPGINFATATIQLMLTNLMYHFDW 528
Score = 40.9 bits (83), Expect(3) = 3e-036
Identities = 17/42 (40%), Positives = 26/42 (61%)
Frame = -3 / +1
Query: 804 MITAGTDTTVISV*WAMAELLRNPRVQEKLQEELDRVVGRDR 679
M AGTDT+ I + +AM L++NPRV LQ E+ + + +
Sbjct: 16 MFEAGTDTSTIVLEYAMVRLMQNPRVMAMLQAEVRSTIPKGK 141
Database: Hordeum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:16 PM
Number of letters in database: 175,134,539
Number of sequences in database: 312,970
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 399,693,452
Number of Sequences: 312970
Number of extensions: 6467476
Number of successful extensions: 92607
Number of sequences better than 1.0e-020: 216
length of database: 58,378,179
effective HSP length: 52
effective length of database: 42,103,739
effective search space used: 12757432917
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)