TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2643556.2.1
(1354 letters)
Database: Hordeum_nucl_with_EST.fasta
312,970 sequences; 175,134,539 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|AF486649.1| Hordeum vulgare subsp. vulgare AGAMOUS-like ... 181 3e-085
gb|AF486648.1| Hordeum vulgare subsp. vulgare AGAMOUS-like ... 165 4e-079
gb|BG414586.2|BG414586 HVSMEk0002P16f Hordeum vulgare testa... 180 1e-076
gb|BG415259.2|BG415259 HVSMEk0005M04f Hordeum vulgare testa... 276 2e-073
gb|BQ764786.1|BQ764786 EBca01_SQ004_L21_R carpel, pre-anthe... 178 4e-072
gb|BE195464.3|BE195464 HVSMEh0089L24f Hordeum vulgare 5-45 ... 270 9e-072
gb|AL509053.1|AL509053 AL509053 Hordeum vulgare Barke devel... 172 1e-069
gb|BE454695.2|BE454695 HVSMEh0095C18f Hordeum vulgare 5-45 ... 173 1e-069
gb|BU996265.1|BU996265 HM13B01r HM Hordeum vulgare subsp. v... 170 3e-068
gb|BG367358.1|BG367358 HVSMEi0011P20f Hordeum vulgare 20 DA... 170 5e-068
gb|BI948755.1|BI948755 HVSMEl0010L12f Hordeum vulgare spike... 166 2e-066
gb|BU975486.1|BU975486 HB31F02r BC Hordeum vulgare subsp. v... 170 7e-066
gb|BU982429.1|BU982429 HA26I11r HA Hordeum vulgare subsp. v... 250 1e-065
gb|AL506894.1|AL506894 AL506894 Hordeum vulgare Barke devel... 170 4e-065
gb|CA024629.1|CA024629 HZ49N15r HZ Hordeum vulgare subsp. v... 170 9e-065
gb|CA026169.1|CA026169 HZ55C06r HZ Hordeum vulgare subsp. v... 181 3e-064
gb|AL506480.1|AL506480 AL506480 Hordeum vulgare Barke devel... 170 1e-063
gb|BI948062.1|BI948062 HVSMEl0008A23f Hordeum vulgare spike... 156 3e-063
gb|BG344090.1|BG344090 HVSMEg0007K02f Hordeum vulgare pre-a... 163 2e-062
gb|BU995356.1|BU995356 HM09P23r HM Hordeum vulgare subsp. v... 165 3e-062
gb|BE454527.3|BE454527 HVSMEh0094C05f Hordeum vulgare 5-45 ... 170 7e-059
gb|AL507763.1|AL507763 AL507763 Hordeum vulgare Barke devel... 170 8e-059
gb|BQ660301.1|BQ660301 HI01N16w HI Hordeum vulgare subsp. v... 181 1e-058
gb|CA025584.1|CA025584 HZ52J05r HZ Hordeum vulgare subsp. v... 170 1e-057
gb|BU973813.1|BU973813 HB26A20r BC Hordeum vulgare subsp. v... 170 1e-057
gb|CA025405.1|CA025405 HZ52B05r HZ Hordeum vulgare subsp. v... 170 1e-057
gb|CA025534.1|CA025534 HZ52G24r HZ Hordeum vulgare subsp. v... 170 1e-057
gb|AL508019.1|AL508019 AL508019 Hordeum vulgare Barke devel... 170 2e-057
gb|BF258470.2|BF258470 HVSMEf0015M23f Hordeum vulgare seedl... 149 3e-056
gb|BU979781.1|BU979781 HA17E15r HA Hordeum vulgare subsp. v... 181 1e-055
gb|BQ462735.1|BQ462735 HI01N16T HI Hordeum vulgare subsp. v... 170 3e-054
gb|CA028663.1|CA028663 HZ62N08r HZ Hordeum vulgare subsp. v... 170 3e-054
gb|BG417142.1|BG417142 HVSMEk0016H10f Hordeum vulgare testa... 157 6e-050
gb|CA028005.1|CA028005 HZ60L09r HZ Hordeum vulgare subsp. v... 170 2e-049
gb|BG417111.1|BG417111 HVSMEk0016F04f Hordeum vulgare testa... 189 3e-047
gb|BU998535.1|BU998535 HI11F23r HI Hordeum vulgare subsp. v... 165 1e-046
gb|BU969355.1|BU969355 HB11E16r BC Hordeum vulgare subsp. v... 170 4e-045
gb|BU995744.1|BU995744 HM11D17r HM Hordeum vulgare subsp. v... 166 9e-045
gb|AL506475.1|AL506475 AL506475 Hordeum vulgare Barke devel... 165 3e-044
gb|BU995877.1|BU995877 HM11K13r HM Hordeum vulgare subsp. v... 165 3e-044
gb|BU979019.1|BU979019 HA14O21r HA Hordeum vulgare subsp. v... 168 4e-044
gb|BU979487.1|BU979487 HA16F04r HA Hordeum vulgare subsp. v... 168 4e-044
gb|BQ458971.1|BQ458971 HA02K21r HA Hordeum vulgare subsp. v... 168 4e-044
gb|CA021258.1|CA021258 HZ39J06r HZ Hordeum vulgare subsp. v... 165 3e-043
gb|BU968939.1|BU968939 HB10A19r BC Hordeum vulgare subsp. v... 124 1e-041
gb|BI776462.2|BI776462 EBpi05_SQ001_H07_R pistil, 8 DPA, no... 160 2e-041
gb|CA025113.1|CA025113 HZ51D24r HZ Hordeum vulgare subsp. v... 168 7e-041
gb|BM442374.2|BM442374 EBan01_SQ003_A06_R anther, yellow st... 167 1e-040
gb|BQ462769.1|BQ462769 HI01P04T HI Hordeum vulgare subsp. v... 119 3e-040
gb|BG418810.1|BG418810 HVSMEk0024I17f Hordeum vulgare testa... 113 4e-038
gb|AY758235.1| Hordeum vulgare subsp. vulgare cultivar Igri... 105 2e-037
gb|AY785825.1| Hordeum vulgare subsp. vulgare cultivar More... 105 2e-037
gb|AY758236.1| Hordeum vulgare subsp. vulgare cultivar Triu... 105 2e-037
gb|AY785826.1| Hordeum vulgare subsp. vulgare cultivar More... 105 2e-037
gb|AY785829.1| Hordeum vulgare subsp. vulgare cultivar Harr... 105 2e-037
gb|AY785827.1| Hordeum vulgare subsp. vulgare cultivar 88Ab... 105 2e-037
gb|AY785828.1| Hordeum vulgare subsp. vulgare cultivar Dick... 105 2e-037
gb|AY785830.1| Hordeum vulgare subsp. vulgare cultivar Stri... 105 2e-037
gb|AY785831.1| Hordeum vulgare subsp. vulgare cultivar Trem... 105 2e-037
gb|AY785833.1| Hordeum vulgare subsp. vulgare cultivar Igri... 105 2e-037
gb|AY785834.1| Hordeum vulgare subsp. vulgare cultivar Nure... 105 2e-037
gb|AY785835.1| Hordeum vulgare subsp. vulgare cultivar Komp... 105 2e-037
gb|AY866486.1| Hordeum vulgare subsp. vulgare cultivar Triu... 105 2e-037
emb|AJ249147.1|HVU249147 Hordeum vulgare mRNA for MADS-box ... 113 3e-037
gb|AY541068.1| Hordeum vulgare subsp. vulgare AGAMOUS LIKE9... 113 3e-037
gb|BU997970.1|BU997970 HI09J04r HI Hordeum vulgare subsp. v... 113 3e-037
gb|CA022102.1|CA022102 HZ42C18r HZ Hordeum vulgare subsp. v... 113 3e-037
gb|BU975017.1|BU975017 HB29N11r BC Hordeum vulgare subsp. v... 109 3e-037
gb|BU975058.1|BU975058 HB29P11r BC Hordeum vulgare subsp. v... 109 3e-037
gb|CA029142.1|CA029142 HZ64F07r HZ Hordeum vulgare subsp. v... 155 4e-037
gb|BJ547898.1|BJ547898 BJ547898 K. Sato unpublished cDNA li... 105 2e-036
gb|CA022365.1|CA022365 HZ42O13r HZ Hordeum vulgare subsp. v... 110 4e-036
gb|BU975559.1|BU975559 HB31I14r BC Hordeum vulgare subsp. v... 111 4e-036
emb|AJ249143.1|HVU249143 Hordeum vulgare mRNA for MADS-box ... 104 2e-035
gb|CA021239.1|CA021239 HZ39I09r HZ Hordeum vulgare subsp. v... 113 3e-035
gb|BU994511.1|BU994511 HM07E21r HM Hordeum vulgare subsp. v... 106 3e-035
gb|CV060720.1|CV060720 BNEL60d5 Barley EST endosperm librar... 101 4e-035
gb|BM097091.2|BM097091 EBpi07_SQ002_F23_R pistil, 12 DPA, n... 106 5e-035
emb|AJ249144.1|HVU249144 Hordeum vulgare mRNA for MADS-box ... 97 6e-035
gb|BI958544.1|BI958544 HVSMEn0015I07f Hordeum vulgare rachi... 105 2e-034
gb|BU997618.1|BU997618 HI08I05r HI Hordeum vulgare subsp. v... 105 2e-034
gb|BG344343.1|BG344343 HVSMEg0008P19f Hordeum vulgare pre-a... 135 4e-034
gb|BJ547783.1|BJ547783 BJ547783 K. Sato unpublished cDNA li... 105 4e-034
gb|BJ547620.1|BJ547620 BJ547620 K. Sato unpublished cDNA li... 105 4e-034
gb|CV060514.1|CV060514 BNEL59a11 Barley EST endosperm libra... 99 5e-034
gb|BJ547335.1|BJ547335 BJ547335 K. Sato unpublished cDNA li... 105 6e-034
gb|BU999147.1|BU999147 HI13G17r HI Hordeum vulgare subsp. v... 105 6e-034
gb|BJ547578.1|BJ547578 BJ547578 K. Sato unpublished cDNA li... 105 6e-034
gb|BU994410.1|BU994410 HM06P17r HM Hordeum vulgare subsp. v... 105 6e-034
gb|BJ547238.1|BJ547238 BJ547238 K. Sato unpublished cDNA li... 99 1e-033
gb|BQ764751.1|BQ764751 EBca01_SQ004_E21_R carpel, pre-anthe... 104 1e-033
gb|BJ547546.1|BJ547546 BJ547546 K. Sato unpublished cDNA li... 99 1e-033
gb|BJ547327.1|BJ547327 BJ547327 K. Sato unpublished cDNA li... 105 4e-033
gb|CV057167.1|CV057167 BNEL24g3 Barley EST endosperm librar... 95 7e-033
gb|BU999601.1|BU999601 HI15A03r HI Hordeum vulgare subsp. v... 105 7e-033
gb|CA032046.1|CA032046 HX11N16r HX Hordeum vulgare subsp. v... 105 7e-033
gb|CA025884.1|CA025884 HZ53G19r HZ Hordeum vulgare subsp. v... 113 3e-032
gb|BM097203.2|BM097203 EBpi07_SQ002_L16_R pistil, 12 DPA, n... 139 3e-032
gb|CV054127.1|CV054127 BNEL107a5 Barley EST endosperm libra... 91 6e-032
gb|AL508733.1|AL508733 AL508733 Hordeum vulgare Barke devel... 113 2e-031
gb|CA024361.1|CA024361 HZ49B13r HZ Hordeum vulgare subsp. v... 113 3e-031
gb|BU996042.1|BU996042 HM12D17r HM Hordeum vulgare subsp. v... 113 3e-031
gb|BU999207.1|BU999207 HI13L03r HI Hordeum vulgare subsp. v... 113 4e-031
gb|CB882030.1|CB882030 HM11K13w HM Hordeum vulgare subsp. v... 135 4e-031
gb|BF622888.3|BF622888 HVSMEa0009O05f Hordeum vulgare seedl... 105 6e-031
gb|BU995060.1|BU995060 HM09B05r HM Hordeum vulgare subsp. v... 93 6e-031
gb|CA024291.1|CA024291 HZ48O08r HZ Hordeum vulgare subsp. v... 93 6e-031
gb|AV933011.1|AV933011 AV933011 K. Sato unpublished cDNA li... 105 1e-030
gb|AV932867.1|AV932867 AV932867 K. Sato unpublished cDNA li... 105 1e-030
gb|BJ547237.1|BJ547237 BJ547237 K. Sato unpublished cDNA li... 88 3e-030
gb|CA021403.1|CA021403 HZ39P24r HZ Hordeum vulgare subsp. v... 105 7e-030
gb|BQ462520.1|BQ462520 HI01C12T HI Hordeum vulgare subsp. v... 105 7e-030
gb|BJ547364.1|BJ547364 BJ547364 K. Sato unpublished cDNA li... 105 7e-030
gb|BJ547239.1|BJ547239 BJ547239 K. Sato unpublished cDNA li... 105 7e-030
gb|BM376225.2|BM376225 EBma01_SQ002_L14_R maternal, 4 DPA, ... 105 7e-030
gb|BU967729.1|BU967729 HB05D14r BC Hordeum vulgare subsp. v... 83 2e-029
gb|CA025109.1|CA025109 HZ51D19r HZ Hordeum vulgare subsp. v... 105 2e-029
gb|BG418254.2|BG418254 HVSMEk0022B16f Hordeum vulgare testa... 105 3e-029
gb|CB881898.1|CB881898 HM11D17w HM Hordeum vulgare subsp. v... 129 4e-029
gb|AV922660.2|AV922660 AV922660 K. Sato unpublished cDNA li... 99 1e-028
gb|AY541067.1| Hordeum vulgare subsp. vulgare AGAMOUS LIKE6... 127 2e-028
gb|CA026975.1|CA026975 HZ57I06r HZ Hordeum vulgare subsp. v... 83 4e-028
gb|BJ547385.1|BJ547385 BJ547385 K. Sato unpublished cDNA li... 105 1e-027
gb|BI776993.2|BI776993 EBpi03_SQ001_J15_R pistil, 4 DPA, no... 79 9e-027
gb|CK124663.1|CK124663 BES1824109o14 BES1824 Hordeum vulgar... 120 2e-026
gb|BU996011.1|BU996011 HM12B18r HM Hordeum vulgare subsp. v... 100 2e-026
gb|BI776503.2|BI776503 EBpi05_SQ001_K07_R pistil, 8 DPA, no... 93 3e-026
gb|BU978508.1|BU978508 HA13H01r HA Hordeum vulgare subsp. v... 118 8e-026
gb|BU979387.1|BU979387 HA15P22r HA Hordeum vulgare subsp. v... 118 8e-026
gb|BU997161.1|BU997161 HI07B21r HI Hordeum vulgare subsp. v... 118 8e-026
gb|CA022702.1|CA022702 HZ44B21r HZ Hordeum vulgare subsp. v... 118 8e-026
gb|CA023382.1|CA023382 HZ46B02r HZ Hordeum vulgare subsp. v... 118 8e-026
gb|CA024068.1|CA024068 HZ48E09r HZ Hordeum vulgare subsp. v... 118 8e-026
gb|CA024560.1|CA024560 HZ49K11r HZ Hordeum vulgare subsp. v... 118 8e-026
gb|CA027865.1|CA027865 HZ60E08r HZ Hordeum vulgare subsp. v... 118 8e-026
gb|BU996044.1|BU996044 HM12D19r HM Hordeum vulgare subsp. v... 105 1e-025
gb|BE193581.2|BE193581 HVSMEh0081M10f Hordeum vulgare 5-45 ... 117 1e-025
gb|CB880425.1|CB880425 HM06I02w HM Hordeum vulgare subsp. v... 115 5e-025
gb|BU984647.1|BU984647 HF04I23r HF Hordeum vulgare subsp. v... 115 7e-025
gb|BF627446.2|BF627446 HVSMEb0004O03f Hordeum vulgare seedl... 114 1e-024
gb|BG367455.1|BG367455 HVSMEi0012F04f Hordeum vulgare 20 DA... 114 1e-024
gb|BE456120.2|BE456120 HVSMEg0019N18f Hordeum vulgare pre-a... 114 1e-024
gb|CA023514.1|CA023514 HZ46H17r HZ Hordeum vulgare subsp. v... 114 1e-024
emb|AJ249145.1|HVU249145 Hordeum vulgare mRNA for MADS-box ... 114 1e-024
emb|AJ249146.1|HVU249146 Hordeum vulgare mRNA for MADS-box ... 114 1e-024
gb|AY758233.1| Hordeum vulgare subsp. vulgare cultivar More... 105 1e-024
gb|AY750995.1| Hordeum vulgare subsp. vulgare cultivar More... 105 1e-024
gb|BU981382.1|BU981382 HA23H05r HA Hordeum vulgare subsp. v... 113 2e-024
gb|BG414398.1|BG414398 HVSMEk0002B05f Hordeum vulgare testa... 113 3e-024
gb|BU994487.1|BU994487 HM07D20r HM Hordeum vulgare subsp. v... 113 3e-024
gb|CB881499.1|CB881499 HM09P23w HM Hordeum vulgare subsp. v... 113 3e-024
gb|BI956235.1|BI956235 HVSMEn0001F21f Hordeum vulgare rachi... 112 3e-024
gb|BI957545.1|BI957545 HVSMEn0010B09f Hordeum vulgare rachi... 112 3e-024
gb|BF266152.2|BF266152 HV_CEa0014F03f Hordeum vulgare seedl... 112 3e-024
gb|BQ470743.1|BQ470743 HX03O10r HX Hordeum vulgare subsp. v... 112 3e-024
gb|BE194007.3|BE194007 HVSMEh0083F13f Hordeum vulgare 5-45 ... 111 9e-024
gb|BQ758398.1|BQ758398 EBma05_SQ001_L12_R maternal, 12 DPA,... 111 1e-023
gb|CA023749.1|CA023749 HZ47E18r HZ Hordeum vulgare subsp. v... 111 1e-023
gb|CV058687.1|CV058687 BNEL3G11 Barley EST endosperm librar... 75 2e-023
gb|BG414969.2|BG414969 HVSMEk0004I01f Hordeum vulgare testa... 108 6e-023
gb|BG414778.2|BG414778 HVSMEk0003L01f Hordeum vulgare testa... 102 6e-023
gb|BG365393.2|BG365393 HVSMEi0002I08f Hordeum vulgare 20 DA... 108 8e-023
gb|BE455888.2|BE455888 HVSMEg0017B20f Hordeum vulgare pre-a... 98 2e-022
gb|BM096825.2|BM096825 EBma07_SQ001_M14_R maternal, 21 DPA,... 106 3e-022
gb|AY541066.1| Hordeum vulgare subsp. vulgare PISTILLATA-li... 98 4e-022
gb|BG310152.1|BG310152 HVSMEc0016P20f Hordeum vulgare seedl... 98 4e-022
gb|CK125530.1|CK125530 BES1824108p02 BES1824 Hordeum vulgar... 98 4e-022
gb|CA022292.1|CA022292 HZ42L06r HZ Hordeum vulgare subsp. v... 98 4e-022
gb|BE231150.2|BE231150 HVSMEg0017C04f Hordeum vulgare pre-a... 105 4e-022
gb|BG343946.2|BG343946 HVSMEg0007D05f Hordeum vulgare pre-a... 105 4e-022
gb|BG418830.2|BG418830 HVSMEk0024K11f Hordeum vulgare testa... 105 4e-022
gb|BM374839.1|BM374839 EBma05_SQ003_C14_R maternal, 12 DPA,... 105 4e-022
gb|AV934186.1|AV934186 AV934186 K. Sato unpublished cDNA li... 105 4e-022
gb|BQ463844.1|BQ463844 HG01J20r HG Hordeum vulgare subsp. v... 105 4e-022
gb|CA023726.1|CA023726 HZ47D14r HZ Hordeum vulgare subsp. v... 105 4e-022
gb|CA025481.1|CA025481 HZ52E16r HZ Hordeum vulgare subsp. v... 105 4e-022
gb|AL510315.1|AL510315 AL510315 Hordeum vulgare Barke devel... 55 4e-022
gb|BF624256.3|BF624256 HVSMEa0013C13f Hordeum vulgare seedl... 105 8e-022
gb|BU979626.1|BU979626 HA16M02r HA Hordeum vulgare subsp. v... 104 1e-021
gb|BU981513.1|BU981513 HA23N18r HA Hordeum vulgare subsp. v... 104 1e-021
gb|CK125853.1|CK125853 BES1824111A1d09 BES1824 Hordeum vulg... 104 1e-021
gb|BM373901.1|BM373901 EBma03_SQ003_B04_R maternal, 8 DPA, ... 104 1e-021
gb|CA021814.1|CA021814 HZ41D07r HZ Hordeum vulgare subsp. v... 104 1e-021
gb|CK123208.1|CK123208 BES1824102i20 BES1824 Hordeum vulgar... 104 1e-021
gb|BI957577.1|BI957577 HVSMEn0010D09f Hordeum vulgare rachi... 103 3e-021
gb|CB880017.1|CB880017 HM05D20w HM Hordeum vulgare subsp. v... 102 4e-021
gb|CK122890.1|CK122890 BES1824101b13 BES1824 Hordeum vulgar... 102 4e-021
>gb|AF486649.1| Hordeum vulgare subsp. vulgare AGAMOUS-like protein 2 HvAG2 (AG2)
mRNA, complete cds
Length = 1068
Score = 181 bits (389), Expect(3) = 3e-059
Identities = 73/110 (66%), Positives = 92/110 (83%)
Frame = +3 / +3
Query: 456 KATSDNSSAAGTIAEVTIQHYKQESARLRQQIVNLQNSNRALIGDSITTMSHKELKHLET 635
K + ++S+AGT+AE+ QHY+QESA+LRQQI LQNSNR LIGD++ TMSH++LK LE
Sbjct: 297 KKATSDTSSAGTVAEINAQHYQQESAKLRQQITTLQNSNRTLIGDTMATMSHRDLKQLEG 476
Query: 636 RLDKALGKIRAKKNDVLCSEVEYMQRREMELQNDNLYLRSRVDENERAQQ 785
RLDK LGKIRA+KN++L +E+EYMQRREMELQN+N YLR +V E ER QQ
Sbjct: 477 RLDKGLGKIRARKNELLSAEIEYMQRREMELQNNNFYLREKVAETERGQQ 626
Score = 168 bits (362), Expect(4) = 3e-085
Identities = 70/78 (89%), Positives = 75/78 (96%)
Frame = +3 / +3
Query: 249 GKGKTEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANNS 428
G+G+ EIKRIENTTNRQ+TFCKRRNGLLKKAYELSVLCDAEVAL+VFSSRGRLYEY+NNS
Sbjct: 93 GRGRIEIKRIENTTNRQLTFCKRRNGLLKKAYELSVLCDAEVALVVFSSRGRLYEYSNNS 272
Query: 429 VKGTIERYKKATSDNSSA 482
VK TIERYKKATSD SSA
Sbjct: 273 VKATIERYKKATSDTSSA 326
Score = 139 bits (298), Expect = 3e-032
Identities = 80/160 (50%), Positives = 93/160 (58%)
Frame = -3 / -2
Query: 932 VEVFPVXXXXXXXXXLHDVELQEAPYWIIRSKTVLLILTCRWCPHHVRCLLCPFILINPA 753
VE F + LHDVELQE + V+LI H R LL P L +
Sbjct: 773 VEGFSILLLGVVLRLLHDVELQEGSRITLYHILVVLIRCGSRPHHVQRLLLPPLSLSDFF 594
Query: 752 P*VQVVILQLHFPSLHVLDFRTQHIVLFCSNLSESFV*PSLQVLKFLVAHGCDRITYQGP 573
P V+VVILQLHFPSLHVL+F +L CSNLS +FV PSLQ+L VAHG I Y P
Sbjct: 593 PQVEVVILQLHFPSLHVLNFSA**FILSCSNLS*AFVQPSLQLL*VSVAHGSHGIAY*SP 414
Query: 572 VGVLQVNDLLPQPSRFLLVMLNGDLCNRTSCAGVVTGCLL 453
VGVLQ LLPQ RFLLV+L DLC+ TS GV + L+
Sbjct: 413 VGVLQGGYLLPQLCRFLLVVLGIDLCDCTSAGGVTSCLLV 294
Score = 124 bits (265), Expect(4) = 3e-085
Identities = 63/109 (57%), Positives = 73/109 (66%)
Frame = +1 / +1
Query: 466 VTTPAQLVRLQRSPFSITSRNLLG*GSRSLTCRTPTGP**VILSQP*ATRNLSTWRLG*T 645
+ TP LV+ QRS S TSRNL *G+R CRTPTG ** I P*AT S+WR G T
Sbjct: 307 LVTPPALVQSQRSMPSTTSRNLQS*GNR*PPCRTPTGL**AIPWLP*ATET*SSWREGWT 486
Query: 646 KLSERLEQKRTMCCVLKSSTCREGKWSCRMTTCT*GAGLMRMKGHNRQR 792
K ERLEQ+R LK STCREGKWSCR+TT T*G +R++G N +R
Sbjct: 487 KA*ERLEQERMNY*ALKLSTCREGKWSCRITTST*GKKSLRLRGGNSRR 633
Score = 122 bits (262), Expect(4) = 8e-062
Identities = 54/79 (68%), Positives = 59/79 (74%)
Frame = -1 / -3
Query: 784 CCALSFSSTRLLKYKLSFCNSISLLCMYSTSEHSTSFFFALIFPRALSNLVSKCLSSLWL 605
CC LS S+T LK KL FC+SISLLCMYS S S SFF ALIFPR LS+L S C SLWL
Sbjct: 625 CCPLSVSATFSLK*KLLFCSSISLLCMYSISALSNSFFLALIFPRPLSSLPSSCFRSLWL 446
Query: 604 MVVIESPIRALLEFCKLTI 548
MV + SPIR LLEFCK+ I
Sbjct: 445 MVAMVSPIRVLLEFCKVVI 389
Score = 105 bits (224), Expect(4) = 8e-062
Identities = 49/74 (66%), Positives = 52/74 (70%)
Frame = -1 / -3
Query: 481 ALELSLVAFLYLSMVPFTLLLAYS*RRPRLEKXXXXXXXXXXXXXXXAFLRRPLRRLQKV 302
ALE+SLVAFLYLSMV TLLL YS*RRPRLEK AF R PLRRLQKV
Sbjct: 325 ALEVSLVAFLYLSMVALTLLLEYS*RRPRLEKTTSATSASQSTESSYAFFRSPLRRLQKV 146
Query: 301 TCLLVVFSMRLISV 260
+C VVFSMRLIS+
Sbjct: 145 SCRFVVFSMRLISI 104
Score = 84.9 bits (179), Expect(3) = 1e-024
Identities = 45/107 (42%), Positives = 53/107 (49%)
Frame = -2 / -1
Query: 804 PPSCSLSVVPFHSHQPGSLSTSCHSATPFPFSACTRLQNTAHRSFLL*SFRELCLT*SPS 625
P + +V P S + S SC+SA PFPFSACT+ Q SFLL*SF LC P+
Sbjct: 645 PSCSTSAVAPSQSQRLFPSSRSCYSAAPFPFSACTQFQRLVIHSFLL*SFLGLCPAFPPA 466
Query: 624 A*VPCGSWL**NHLSGPCWXXXXXXXXXXX*QIPACNAEW*PLQSYQ 484
A CGSW L CW QIPA +A * L+ YQ
Sbjct: 465 ALGLCGSW*PWYRLLESCWSSARWLSVASALQIPAGSAGH*SLRLYQ 325
Score = 51.9 bits (107), Expect(4) = 3e-085
Identities = 19/25 (76%), Positives = 23/25 (92%)
Frame = +3 / +3
Query: 858 RSFLQFNIVQQPQFYSQQEDRKDFN 932
R+FLQFNI+QQPQ+Y+QQEDRK N
Sbjct: 699 RTFLQFNIMQQPQYYTQQEDRKTLN 773
Score = 51.5 bits (106), Expect(3) = 3e-059
Identities = 19/24 (79%), Positives = 21/24 (87%)
Frame = +2 / +2
Query: 272 AHREHDQQAGHLLQAPQRPPQEGV 343
AHREHD+ A HLLQAPQR P+EGV
Sbjct: 116 AHREHDEPAAHLLQAPQRTPEEGV 187
Score = 40.0 bits (81), Expect(4) = 8e-062
Identities = 17/25 (68%), Positives = 19/25 (76%)
Frame = -1 / -3
Query: 931 LKSFRSSC*E*N*GCCTMLNCRKLL 857
L+ F SSC * *GCC MLNCRK+L
Sbjct: 772 LRVFLSSCWV*Y*GCCMMLNCRKVL 698
Score = 38.2 bits (77), Expect(3) = 1e-024
Identities = 12/16 (75%), Positives = 12/16 (75%)
Frame = -2 / -1
Query: 480 RWSCHWLPSCTSQWCP 433
RW CH LPSC SQW P
Sbjct: 324 RWRCH*LPSCISQWLP 277
Score = 35.9 bits (72), Expect(3) = 3e-059
Identities = 15/21 (71%), Positives = 17/21 (80%)
Frame = +2 / +2
Query: 854 NKELPAVQHRAAASVLFSAGG 916
++ LPAVQH AAASVL AGG
Sbjct: 695 SENLPAVQHHAAASVLHPAGG 757
Score = 29.5 bits (58), Expect(4) = 3e-085
Identities = 13/25 (52%), Positives = 13/25 (52%)
Frame = +3 / +3
Query: 780 QQTANMMGAPSTSEYQQHGFTPYDP 854
QQT NMMGA STS DP
Sbjct: 624 QQTLNMMGAASTSNEYDQNMIQCDP 698
Score = 28.1 bits (55), Expect(3) = 1e-024
Identities = 13/17 (76%), Positives = 13/17 (76%)
Frame = -2 / -1
Query: 915 PPAENRTEAAARC*TAG 865
PPA TEAAA C*TAG
Sbjct: 756 PPAGCSTEAAA*C*TAG 706
Score = 26.7 bits (52), Expect(4) = 8e-062
Identities = 9/12 (75%), Positives = 10/12 (83%)
Frame = -1 / -3
Query: 814 VDGAPIMFAVCC 779
V+ APIMF VCC
Sbjct: 658 VEAAPIMFNVCC 623
>gb|AF486648.1| Hordeum vulgare subsp. vulgare AGAMOUS-like protein 1 HvAG1 (AG1)
mRNA, complete cds
Length = 1163
Score = 165 bits (354), Expect(3) = 4e-079
Identities = 68/78 (87%), Positives = 74/78 (94%)
Frame = +3 / +1
Query: 249 GKGKTEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANNS 428
G+G+ EIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVAL+VFSSRGRLYEY+NNS
Sbjct: 142 GRGRIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALVVFSSRGRLYEYSNNS 321
Query: 429 VKGTIERYKKATSDNSSA 482
VK TIERYKKA SD S++
Sbjct: 322 VKATIERYKKANSDTSNS 375
Score = 135 bits (290), Expect(3) = 4e-079
Identities = 54/96 (56%), Positives = 75/96 (78%)
Frame = +3 / +1
Query: 564 NSNRALIGDSITTMSHKELKHLETRLDKALGKIRAKKNDVLCSEVEYMQRREMELQNDNL 743
+++R+L+ DS++TM+ ++LK LE RL+K + KIRA+KN+++ +EVEYMQ+REMEL NDN+
Sbjct: 457 SNSRSLVRDSVSTMTLRDLKQLEGRLEKGIAKIRARKNELMYAEVEYMQKREMELHNDNI 636
Query: 744 YLRSRVDENERAQQTANMMGAPSTSEYQQHGFTPYD 851
YLRS+V ENER QQ NMM + STS H PYD
Sbjct: 637 YLRSKVSENERGQQPMNMMASGSTSSEYDHMVAPYD 744
Score = 109 bits (233), Expect(4) = 6e-051
Identities = 50/73 (68%), Positives = 54/73 (73%)
Frame = -1 / -1
Query: 478 LELSLVAFLYLSMVPFTLLLAYS*RRPRLEKXXXXXXXXXXXXXXXAFLRRPLRRLQKVT 299
L++SL+AFLYLSMV FTLL YS*RRPRLEK AFLRRPLRRLQKVT
Sbjct: 371 LDVSLLAFLYLSMVAFTLLFEYS*RRPRLEKTTRATSASQSTESSYAFLRRPLRRLQKVT 192
Query: 298 CLLVVFSMRLISV 260
C LVVFSMRLIS+
Sbjct: 191 CRLVVFSMRLISI 153
Score = 88.6 bits (187), Expect(4) = 6e-051
Identities = 45/83 (54%), Positives = 53/83 (63%)
Frame = -1 / -1
Query: 817 LVDGAPIMFAVCCALSFSSTRLLKYKLSFCNSISLLCMYSTSEHSTSFFFALIFPRALSN 638
LVD IMF C LSFS T LL+ LS C+SISL C+YSTS + +SFF ALI S+
Sbjct: 710 LVDPDAIMFIGC*PLSFSDTLLLR*MLSLCSSISLFCIYSTSAYISSFFLALILAMPFSS 531
Query: 637 LVSKCLSSLWLMVVIESPIRALL 569
L S CL SL +MV+ ES LL
Sbjct: 530 LPSSCLRSLRVMVLTESLTSDLL 462
Score = 60.2 bits (125), Expect(4) = 3e-034
Identities = 35/82 (42%), Positives = 46/82 (56%)
Frame = +1 / +2
Query: 589 ILSQP*ATRNLSTWRLG*TKLSERLEQKRTMCCVLKSSTCREGKWSCRMTTCT*GAGLMR 768
ILS P* LS+ + G K R E +R C+LK S CR GKWS T T*GA +R
Sbjct: 482 ILSAP*P*GILSSLKAGWRKA*PR*ELERMS*CMLKLSICRRGKWSYITITFT*GARCLR 661
Query: 769 MKGHNRQRT*WGHHRQVSISST 834
M+G + + T*W R+ + + T
Sbjct: 662 MRGVSSR*T*WRRGRRAANTIT 727
Score = 57.4 bits (119), Expect(4) = 3e-034
Identities = 22/24 (91%), Positives = 22/24 (91%)
Frame = +2 / +3
Query: 272 AHREHDQQAGHLLQAPQRPPQEGV 343
AHREH Q AGHLLQAPQRPPQEGV
Sbjct: 165 AHREHHQPAGHLLQAPQRPPQEGV 236
Score = 55.6 bits (115), Expect(4) = 3e-034
Identities = 22/39 (56%), Positives = 32/39 (82%)
Frame = +3 / +1
Query: 456 KATSDNSSAAGTIAEVTIQHYKQESARLRQQIVNLQNSN 572
K + ++S +GT+AEV Q+Y+QES++LRQQI +LQNSN
Sbjct: 346 KKANSDTSNSGTVAEVNAQYYQQESSKLRQQISSLQNSN 462
Score = 35.0 bits (70), Expect(4) = 6e-051
Identities = 17/35 (48%), Positives = 18/35 (51%)
Frame = -3 / -3
Query: 566 VLQVNDLLPQPSRFLLVMLNGDLCNRTSCAGVVTG 462
VLQ DLL Q LLV+L D CNR V G
Sbjct: 456 VLQATDLLAQLGGLLLVVLGIDFCNRARVGCVTVG 352
Score = 34.5 bits (69), Expect(3) = 4e-079
Identities = 17/38 (44%), Positives = 22/38 (57%)
Frame = +1 / +2
Query: 460 QPVTTPAQLVRLQRSPFSITSRNLLG*GSRSLTCRTPT 573
+P T L RLQ+S S TSR+ SRS+ C+T T
Sbjct: 350 RPTVTHPTLARLQKSMPSTTSRSPPSCASRSVACKTQT 463
Score = 28.6 bits (56), Expect(4) = 3e-034
Identities = 11/16 (68%), Positives = 13/16 (81%)
Frame = +2 / +3
Query: 431 EGHH*EVQEGNQ*QLQ 478
E HH*EVQ+G Q* +Q
Sbjct: 324 ESHH*EVQKGQQ*HIQ 371
Score = 25.4 bits (49), Expect(4) = 6e-051
Identities = 8/11 (72%), Positives = 8/11 (72%)
Frame = -1 / -1
Query: 889 CCTMLNCRKLL 857
CC ML CRK L
Sbjct: 779 CCCMLTCRKFL 747
>gb|BG414586.2|BG414586 HVSMEk0002P16f Hordeum vulgare testa/pericarp EST library
HVcDNA0013 (normal) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEk0002P16f, mRNA sequence
Length = 804
Score = 180 bits (387), Expect(2) = 1e-054
Identities = 72/110 (65%), Positives = 92/110 (83%)
Frame = +3 / +3
Query: 456 KATSDNSSAAGTIAEVTIQHYKQESARLRQQIVNLQNSNRALIGDSITTMSHKELKHLET 635
K + ++S+AGT+AE+ QHY+QESA+LRQQI LQNSNR LIGD++ TMSH++LKHLE
Sbjct: 339 KKATSDTSSAGTVAEINAQHYQQESAKLRQQITTLQNSNRTLIGDTMATMSHRDLKHLEG 518
Query: 636 RLDKALGKIRAKKNDVLCSEVEYMQRREMELQNDNLYLRSRVDENERAQQ 785
RLDK L KIRA+KN++L +E+EYMQR+EMELQN+N YLR +V E ER QQ
Sbjct: 519 RLDKGLXKIRARKNELLSAEIEYMQRKEMELQNNNFYLREKVAETERGQQ 668
Score = 170 bits (365), Expect(3) = 1e-076
Identities = 71/78 (91%), Positives = 75/78 (96%)
Frame = +3 / +3
Query: 249 GKGKTEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANNS 428
G+G+ EIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVAL+VFSSRGRLYEY+NNS
Sbjct: 135 GRGRIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALVVFSSRGRLYEYSNNS 314
Query: 429 VKGTIERYKKATSDNSSA 482
VK TIERYKKATSD SSA
Sbjct: 315 VKATIERYKKATSDTSSA 368
Score = 126 bits (270), Expect = 3e-028
Identities = 67/116 (57%), Positives = 76/116 (65%)
Frame = -3 / -2
Query: 800 HHVRCLLCPFILINPAP*VQVVILQLHFPSLHVLDFRTQHIVLFCSNLSESFV*PSLQVL 621
H R LL PF L + P V+VVILQLHF SLHVL+F +L CSNLS +FV PSLQVL
Sbjct: 683 HVQRLLLPPFSLSDFFPQVEVVILQLHFLSLHVLNFSA**FILSCSNLS*AFVQPSLQVL 504
Query: 620 KFLVAHGCDRITYQGPVGVLQVNDLLPQPSRFLLVMLNGDLCNRTSCAGVVTGCLL 453
VAHG I Y PVGVLQ LLPQ RFLLV+L DLC+ TS GV + L+
Sbjct: 503 *VSVAHGSHGIAY*SPVGVLQGGYLLPQLCRFLLVVLGIDLCDCTSAGGVTSCLLV 336
Score = 125 bits (268), Expect(3) = 1e-076
Identities = 64/109 (58%), Positives = 72/109 (66%)
Frame = +1 / +1
Query: 466 VTTPAQLVRLQRSPFSITSRNLLG*GSRSLTCRTPTGP**VILSQP*ATRNLSTWRLG*T 645
+ TP LV+ QRS S TSRNL *G+R CRTPTG ** I P*AT STWR G T
Sbjct: 349 LVTPPALVQSQRSMPSTTSRNLQS*GNR*PPCRTPTGL**AIPWLP*ATET*STWREGWT 528
Query: 646 KLSERLEQKRTMCCVLKSSTCREGKWSCRMTTCT*GAGLMRMKGHNRQR 792
K ERLEQ+R LK STCRE KWSCR+TT T*G +R+KG N +R
Sbjct: 529 KAXERLEQERMNY*ALKLSTCRERKWSCRITTST*GKKSLRLKGGNSRR 675
Score = 117 bits (251), Expect(3) = 6e-054
Identities = 52/79 (65%), Positives = 58/79 (73%)
Frame = -1 / -3
Query: 784 CCALSFSSTRLLKYKLSFCNSISLLCMYSTSEHSTSFFFALIFPRALSNLVSKCLSSLWL 605
CC LS S+T LK KL FC+SIS LCMYS S S SFF ALIF R LS+L S+C SLWL
Sbjct: 667 CCPLSVSATFSLK*KLLFCSSISFLCMYSISALSNSFFLALIFXRPLSSLPSRCFRSLWL 488
Query: 604 MVVIESPIRALLEFCKLTI 548
MV + SPIR LLEFCK+ I
Sbjct: 487 MVAMVSPIRVLLEFCKVVI 431
Score = 107 bits (228), Expect(3) = 6e-054
Identities = 50/74 (67%), Positives = 52/74 (70%)
Frame = -1 / -3
Query: 481 ALELSLVAFLYLSMVPFTLLLAYS*RRPRLEKXXXXXXXXXXXXXXXAFLRRPLRRLQKV 302
ALE+SLVAFLYLSMV TLLL YS*RRPRLEK AF R PLRRLQKV
Sbjct: 367 ALEVSLVAFLYLSMVALTLLLEYS*RRPRLEKTTSATSASQSTESSYAFFRSPLRRLQKV 188
Query: 301 TCLLVVFSMRLISV 260
TC VVFSMRLIS+
Sbjct: 187 TCRFVVFSMRLISI 146
Score = 88.6 bits (187), Expect(2) = 2e-022
Identities = 46/107 (42%), Positives = 53/107 (49%)
Frame = -2 / -1
Query: 804 PPSCSLSVVPFHSHQPGSLSTSCHSATPFPFSACTRLQNTAHRSFLL*SFRELCLT*SPS 625
P + +V PF S + S SC+SA PFPFSACT+ Q SFLL*SF LC P
Sbjct: 687 PSCSTSAVAPFQSQRLFPSSRSCYSAAPFPFSACTQFQRLVIHSFLL*SFXGLCPAFPPG 508
Query: 624 A*VPCGSWL**NHLSGPCWXXXXXXXXXXX*QIPACNAEW*PLQSYQ 484
A CGSW L CW QIPA +A * L+ YQ
Sbjct: 507 ALGLCGSW*PWYRLLESCWSSARWLSVASALQIPAGSAGH*SLRLYQ 367
Score = 54.2 bits (112), Expect(2) = 1e-054
Identities = 20/24 (83%), Positives = 22/24 (91%)
Frame = +2 / +2
Query: 272 AHREHDQQAGHLLQAPQRPPQEGV 343
AHREHD+ AGHLLQAPQR P+EGV
Sbjct: 158 AHREHDEPAGHLLQAPQRTPEEGV 229
Score = 38.2 bits (77), Expect(2) = 2e-022
Identities = 12/16 (75%), Positives = 12/16 (75%)
Frame = -2 / -1
Query: 480 RWSCHWLPSCTSQWCP 433
RW CH LPSC SQW P
Sbjct: 366 RWRCH*LPSCISQWLP 319
Score = 31.3 bits (62), Expect(3) = 1e-076
Identities = 14/41 (34%), Positives = 18/41 (43%)
Frame = +3 / +3
Query: 780 QQTANMMGAPSTSEYQQHGFTPYDPIRSFLQFNIVQQPQFY 902
QQT NMMGA TS + +DP +P F+
Sbjct: 666 QQTLNMMGAAFTSNEYEQNMIQWDPENLSWSLTSCSKPYFF 788
Score = 25.4 bits (49), Expect(3) = 6e-054
Identities = 9/12 (75%), Positives = 9/12 (75%)
Frame = -1 / -3
Query: 814 VDGAPIMFAVCC 779
V APIMF VCC
Sbjct: 700 VKAAPIMFNVCC 665
>gb|BG415259.2|BG415259 HVSMEk0005M04f Hordeum vulgare testa/pericarp EST library
HVcDNA0013 (normal) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEk0005M04f, mRNA sequence
Length = 892
Score = 276 bits (597), Expect = 2e-073
Identities = 113/176 (64%), Positives = 154/176 (87%)
Frame = +3 / +2
Query: 249 GKGKTEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANNS 428
G+G+ EIKRIENTT+RQVTFCKRRNGLLKKAYELSVLC+AE+ALIVFS+RGRLYEYA+NS
Sbjct: 107 GRGRIEIKRIENTTSRQVTFCKRRNGLLKKAYELSVLCEAEIALIVFSARGRLYEYASNS 286
Query: 429 VKGTIERYKKATSDNSSAAGTIAEVTIQHYKQESARLRQQIVNLQNSNRALIGDSITTMS 608
+ TI+RYKKA++ +S +A I + Q+++QESA+LRQQI++LQN+NR L+GDS+ ++
Sbjct: 287 TRTTIDRYKKASASSSGSAPAIDVNSQQYFQQESAKLRQQILSLQNANRHLMGDSVGNLT 466
Query: 609 HKELKHLETRLDKALGKIRAKKNDVLCSEVEYMQRREMELQNDNLYLRSRVDENER 776
KELK LE RLDK++G+IR+KK+++L +E+EYMQ+ E +LQN+N+YLR++V + ER
Sbjct: 467 VKELKTLENRLDKSIGRIRSKKHELLSAEIEYMQKLEADLQNENMYLRAKVADAER 634
Score = 74.4 bits (156), Expect(2) = 9e-029
Identities = 36/75 (48%), Positives = 46/75 (61%)
Frame = -1 / -2
Query: 772 SFSSTRLLKYKLSFCNSISLLCMYSTSEHSTSFFFALIFPRALSNLVSKCLSSLWLMVVI 593
S S+T +Y SFC S S CMYS S S+S FF I P LS+ S+ LSSL + +
Sbjct: 630 SASATLARRYMFSFCRSASSFCMYSISADSSSCFFDRIRPMLLSSRFSRVLSSLTVKLPT 451
Query: 592 ESPIRALLEFCKLTI 548
ESPI+ LL FC+ +I
Sbjct: 450 ESPIKCLLAFCRDSI 406
Score = 73.5 bits (154), Expect(2) = 9e-029
Identities = 38/67 (56%), Positives = 41/67 (61%)
Frame = -1 / -2
Query: 460 AFLYLSMVPFTLLLAYS*RRPRLEKXXXXXXXXXXXXXXXAFLRRPLRRLQKVTCLLVVF 281
AFLYLS+V LLLAYS*RRPR EK AFL P RLQKVT LVVF
Sbjct: 318 AFLYLSIVVLVLLLAYS*RRPRAEKTIKAISASQRTESS*AFLSSPFLRLQKVTWRLVVF 139
Query: 280 SMRLISV 260
S+ LIS+
Sbjct: 138 SILLISI 118
>gb|BQ764786.1|BQ764786 EBca01_SQ004_L21_R carpel, pre-anthesis, no treatment, cv Optic,
EBca01 Hordeum vulgare subsp. vulgare cDNA clone
EBca01_SQ004_L21 5', mRNA sequence
Length = 719
Score = 178 bits (383), Expect(2) = 4e-054
Identities = 72/110 (65%), Positives = 91/110 (82%)
Frame = +3 / +3
Query: 456 KATSDNSSAAGTIAEVTIQHYKQESARLRQQIVNLQNSNRALIGDSITTMSHKELKHLET 635
K + ++S+AGT+AE+ QHY+QESA+LRQQI LQNSNR LIGD++ TMSH++LK LE
Sbjct: 321 KKATSDTSSAGTVAEINAQHYQQESAKLRQQITTLQNSNRTLIGDTMATMSHRDLKQLEG 500
Query: 636 RLDKALGKIRAKKNDVLCSEVEYMQRREMELQNDNLYLRSRVDENERAQQ 785
RLDK LGKI A+KN++L +E+EYMQRREMELQN+N YLR +V E ER QQ
Sbjct: 501 RLDKGLGKIXARKNELLSAEIEYMQRREMELQNNNFYLREKVAETERGQQ 650
Score = 170 bits (365), Expect(2) = 4e-072
Identities = 71/78 (91%), Positives = 75/78 (96%)
Frame = +3 / +3
Query: 249 GKGKTEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANNS 428
G+G+ EIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVAL+VFSSRGRLYEY+NNS
Sbjct: 117 GRGRIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALVVFSSRGRLYEYSNNS 296
Query: 429 VKGTIERYKKATSDNSSA 482
VK TIERYKKATSD SSA
Sbjct: 297 VKATIERYKKATSDTSSA 350
Score = 127 bits (272), Expect = 1e-028
Identities = 67/127 (52%), Positives = 82/127 (64%)
Frame = -3 / -1
Query: 833 VLLILTCRWCPHHVRCLLCPFILINPAP*VQVVILQLHFPSLHVLDFRTQHIVLFCSNLS 654
+L+++ + P R LL PF L + P V+VVILQLHFPSLHVL+F +L C NLS
Sbjct: 698 LLVLIDGKPPPSCQRLLLPPFSLSDFFPQVEVVILQLHFPSLHVLNFSA**FILSCXNLS 519
Query: 653 ESFV*PSLQVLKFLVAHGCDRITYQGPVGVLQVNDLLPQPSRFLLVMLNGDLCNRTSCAG 474
+FV PSLQ+L VAHG I Y PVGVLQ LLPQ RFLLV+L DLC+ TS G
Sbjct: 518 *AFVQPSLQLL*VSVAHGSHGIAY*SPVGVLQGGYLLPQLCRFLLVVLGIDLCDCTSAGG 339
Query: 473 VVTGCLL 453
V + L+
Sbjct: 338 VTSCLLV 318
Score = 122 bits (262), Expect(2) = 4e-072
Identities = 63/109 (57%), Positives = 72/109 (66%)
Frame = +1 / +1
Query: 466 VTTPAQLVRLQRSPFSITSRNLLG*GSRSLTCRTPTGP**VILSQP*ATRNLSTWRLG*T 645
+ TP LV+ QRS S TSRNL *G+R CRTPTG ** I P*AT S+WR G T
Sbjct: 331 LVTPPALVQSQRSMPSTTSRNLQS*GNR*PPCRTPTGL**AIPWLP*ATET*SSWREGWT 510
Query: 646 KLSERLEQKRTMCCVLKSSTCREGKWSCRMTTCT*GAGLMRMKGHNRQR 792
K ERL Q+R LK STCREGKWSCR+TT T*G +R+KG N +R
Sbjct: 511 KA*ERLXQERMNY*ALKLSTCREGKWSCRITTST*GKKSLRLKGGNSRR 657
Score = 120 bits (257), Expect(2) = 1e-052
Identities = 53/79 (67%), Positives = 58/79 (73%)
Frame = -1 / -2
Query: 784 CCALSFSSTRLLKYKLSFCNSISLLCMYSTSEHSTSFFFALIFPRALSNLVSKCLSSLWL 605
CC LS S+T LK KL FC+SISLLCMYS S S SFF A IFPR LS+L S C SLWL
Sbjct: 649 CCPLSVSATFSLK*KLLFCSSISLLCMYSISALSNSFFLAXIFPRPLSSLPSSCFRSLWL 470
Query: 604 MVVIESPIRALLEFCKLTI 548
MV + SPIR LLEFCK+ I
Sbjct: 469 MVAMVSPIRVLLEFCKVVI 413
Score = 107 bits (228), Expect(2) = 1e-052
Identities = 50/74 (67%), Positives = 52/74 (70%)
Frame = -1 / -2
Query: 481 ALELSLVAFLYLSMVPFTLLLAYS*RRPRLEKXXXXXXXXXXXXXXXAFLRRPLRRLQKV 302
ALE+SLVAFLYLSMV TLLL YS*RRPRLEK AF R PLRRLQKV
Sbjct: 349 ALEVSLVAFLYLSMVALTLLLEYS*RRPRLEKTTSATSASQSTESSYAFFRSPLRRLQKV 170
Query: 301 TCLLVVFSMRLISV 260
TC VVFSMRLIS+
Sbjct: 169 TCRFVVFSMRLISI 128
Score = 87.7 bits (185), Expect(2) = 3e-022
Identities = 46/107 (42%), Positives = 54/107 (50%)
Frame = -2 / -3
Query: 804 PPSCSLSVVPFHSHQPGSLSTSCHSATPFPFSACTRLQNTAHRSFLL*SFRELCLT*SPS 625
P + +V PF S + S SC+SA PFPFSACT+ Q SFLL*SF LC P+
Sbjct: 669 PIMSTSAVAPFQSQRLFPSSRSCYSAAPFPFSACTQFQRLVIHSFLL*SFLGLCPAFPPA 490
Query: 624 A*VPCGSWL**NHLSGPCWXXXXXXXXXXX*QIPACNAEW*PLQSYQ 484
A CGSW L CW QIPA +A * L+ YQ
Sbjct: 489 ALGLCGSW*PWYRLLESCWSSARWLSVASALQIPAGSAGH*SLRLYQ 349
Score = 54.2 bits (112), Expect(2) = 4e-054
Identities = 20/24 (83%), Positives = 22/24 (91%)
Frame = +2 / +2
Query: 272 AHREHDQQAGHLLQAPQRPPQEGV 343
AHREHD+ AGHLLQAPQR P+EGV
Sbjct: 140 AHREHDEPAGHLLQAPQRTPEEGV 211
Score = 38.2 bits (77), Expect(2) = 3e-022
Identities = 12/16 (75%), Positives = 12/16 (75%)
Frame = -2 / -3
Query: 480 RWSCHWLPSCTSQWCP 433
RW CH LPSC SQW P
Sbjct: 348 RWRCH*LPSCISQWLP 301
>gb|BE195464.3|BE195464 HVSMEh0089L24f Hordeum vulgare 5-45 DAP spike EST library
HVcDNA0009 (5 to 45 DAP) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEh0089L24f, mRNA sequence
Length = 786
Score = 270 bits (585), Expect = 9e-072
Identities = 111/176 (63%), Positives = 153/176 (86%)
Frame = +3 / +2
Query: 249 GKGKTEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANNS 428
G+G+ EIKRIENTT+RQVTFCKRRNGLLKKAYELSVLC+AE+ALIVFS+RGRLYEYA+NS
Sbjct: 107 GRGRIEIKRIENTTSRQVTFCKRRNGLLKKAYELSVLCEAEIALIVFSARGRLYEYASNS 286
Query: 429 VKGTIERYKKATSDNSSAAGTIAEVTIQHYKQESARLRQQIVNLQNSNRALIGDSITTMS 608
+ TI+RYKKA++ +S +A I + Q+++QESA+LRQQI++LQN+NR L+GDS+ ++
Sbjct: 287 TRTTIDRYKKASASSSGSAPAIDVNSQQYFQQESAKLRQQILSLQNANRHLMGDSVGNLT 466
Query: 609 HKELKHLETRLDKALGKIRAKKNDVLCSEVEYMQRREMELQNDNLYLRSRVDENER 776
KELK LE RLDK++G+IR+KK+++L +E+EYMQ+ E +LQN+N++L ++V + ER
Sbjct: 467 VKELKTLENRLDKSIGRIRSKKHELLSAEIEYMQKLEADLQNENMFLLTQVADAER 634
Score = 73.5 bits (154), Expect(2) = 1e-027
Identities = 38/67 (56%), Positives = 41/67 (61%)
Frame = -1 / -1
Query: 460 AFLYLSMVPFTLLLAYS*RRPRLEKXXXXXXXXXXXXXXXAFLRRPLRRLQKVTCLLVVF 281
AFLYLS+V LLLAYS*RRPR EK AFL P RLQKVT LVVF
Sbjct: 318 AFLYLSIVVLVLLLAYS*RRPRAEKTIKAISASQRTESS*AFLSSPFLRLQKVTWRLVVF 139
Query: 280 SMRLISV 260
S+ LIS+
Sbjct: 138 SILLISI 118
Score = 70.7 bits (148), Expect(2) = 1e-027
Identities = 35/75 (46%), Positives = 46/75 (61%)
Frame = -1 / -1
Query: 772 SFSSTRLLKYKLSFCNSISLLCMYSTSEHSTSFFFALIFPRALSNLVSKCLSSLWLMVVI 593
S S+T + + SFC S S CMYS S S+S FF I P LS+ S+ LSSL + +
Sbjct: 630 SASATWVRRNMFSFCRSASSFCMYSISADSSSCFFDRIRPMLLSSRFSRVLSSLTVKLPT 451
Query: 592 ESPIRALLEFCKLTI 548
ESPI+ LL FC+ +I
Sbjct: 450 ESPIKCLLAFCRDSI 406
>gb|AL509053.1|AL509053 AL509053 Hordeum vulgare Barke developing caryopsis (3.-15.DAP)
Hordeum vulgare subsp. vulgare cDNA clone HY10J07V 5',
mRNA sequence
Length = 700
Score = 172 bits (370), Expect(2) = 3e-052
Identities = 69/105 (65%), Positives = 89/105 (84%)
Frame = +3 / +2
Query: 456 KATSDNSSAAGTIAEVTIQHYKQESARLRQQIVNLQNSNRALIGDSITTMSHKELKHLET 635
K + ++S+AGT+AE+ QHY+QESA+LRQQI LQNSNR LIGD++ TMSH++LK LE
Sbjct: 344 KKATSDTSSAGTVAEINAQHYQQESAKLRQQITTLQNSNRTLIGDTMATMSHRDLKQLEG 523
Query: 636 RLDKALGKIRAKKNDVLCSEVEYMQRREMELQNDNLYLRSRVDEN 770
RLDK LGKIRA+KN++L +E+EYMQRREMELQN+N YLR +V E+
Sbjct: 524 RLDKGLGKIRARKNELLSAEIEYMQRREMELQNNNFYLREKVAED 658
Score = 170 bits (365), Expect(2) = 1e-069
Identities = 71/78 (91%), Positives = 75/78 (96%)
Frame = +3 / +2
Query: 249 GKGKTEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANNS 428
G+G+ EIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVAL+VFSSRGRLYEY+NNS
Sbjct: 140 GRGRIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALVVFSSRGRLYEYSNNS 319
Query: 429 VKGTIERYKKATSDNSSA 482
VK TIERYKKATSD SSA
Sbjct: 320 VKATIERYKKATSDTSSA 373
Score = 120 bits (257), Expect = 2e-026
Identities = 60/100 (60%), Positives = 69/100 (69%)
Frame = -3 / -1
Query: 752 P*VQVVILQLHFPSLHVLDFRTQHIVLFCSNLSESFV*PSLQVLKFLVAHGCDRITYQGP 573
P V+VVILQLHFPSLHVL+F +L CSNLS +FV PSLQ+L VAHG I Y P
Sbjct: 640 PQVEVVILQLHFPSLHVLNFSA**FILSCSNLS*AFVQPSLQLL*VSVAHGSHGIAY*SP 461
Query: 572 VGVLQVNDLLPQPSRFLLVMLNGDLCNRTSCAGVVTGCLL 453
VGVLQ LLPQ RFLLV+L DLC+ TS GV + L+
Sbjct: 460 VGVLQGGYLLPQLCRFLLVVLGIDLCDCTSAGGVTSCLLV 341
Score = 114 bits (244), Expect(2) = 1e-069
Identities = 59/96 (61%), Positives = 65/96 (67%)
Frame = +1 / +3
Query: 466 VTTPAQLVRLQRSPFSITSRNLLG*GSRSLTCRTPTGP**VILSQP*ATRNLSTWRLG*T 645
+ TP LV+ QRS S TSRNL *G+R CRTPTG ** I P*AT S+WR G T
Sbjct: 354 LVTPPALVQSQRSMPSTTSRNLQS*GNR*PPCRTPTGL**AIPWLP*ATET*SSWREGWT 533
Query: 646 KLSERLEQKRTMCCVLKSSTCREGKWSCRMTTCT*G 753
K ERLEQ+R LK STCREGKWSCR+TT T*G
Sbjct: 534 KA*ERLEQERMNY*ALKLSTCREGKWSCRITTST*G 641
Score = 111 bits (238), Expect(2) = 4e-050
Identities = 50/73 (68%), Positives = 55/73 (75%)
Frame = -1 / -2
Query: 766 SSTRLLKYKLSFCNSISLLCMYSTSEHSTSFFFALIFPRALSNLVSKCLSSLWLMVVIES 587
S+T LK KL FC+SISLLCMYS S S SFF ALIFPR LS+L S C SLWLMV + S
Sbjct: 654 SATFSLK*KLLFCSSISLLCMYSISALSNSFFLALIFPRPLSSLPSSCFRSLWLMVAMVS 475
Query: 586 PIRALLEFCKLTI 548
PIR LLEFCK+ I
Sbjct: 474 PIRVLLEFCKVVI 436
Score = 107 bits (228), Expect(2) = 4e-050
Identities = 50/74 (67%), Positives = 52/74 (70%)
Frame = -1 / -2
Query: 481 ALELSLVAFLYLSMVPFTLLLAYS*RRPRLEKXXXXXXXXXXXXXXXAFLRRPLRRLQKV 302
ALE+SLVAFLYLSMV TLLL YS*RRPRLEK AF R PLRRLQKV
Sbjct: 372 ALEVSLVAFLYLSMVALTLLLEYS*RRPRLEKTTSATSASQSTESSYAFFRSPLRRLQKV 193
Query: 301 TCLLVVFSMRLISV 260
TC VVFSMRLIS+
Sbjct: 192 TCRFVVFSMRLISI 151
Score = 54.2 bits (112), Expect(2) = 3e-052
Identities = 20/24 (83%), Positives = 22/24 (91%)
Frame = +2 / +1
Query: 272 AHREHDQQAGHLLQAPQRPPQEGV 343
AHREHD+ AGHLLQAPQR P+EGV
Sbjct: 163 AHREHDEPAGHLLQAPQRTPEEGV 234
>gb|BE454695.2|BE454695 HVSMEh0095C18f Hordeum vulgare 5-45 DAP spike EST library
HVcDNA0009 (5 to 45 DAP) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEh0095C18f, mRNA sequence
Length = 880
Score = 173 bits (373), Expect(2) = 1e-052
Identities = 70/110 (63%), Positives = 90/110 (81%)
Frame = +3 / +3
Query: 456 KATSDNSSAAGTIAEVTIQHYKQESARLRQQIVNLQNSNRALIGDSITTMSHKELKHLET 635
K + ++S+AGT+AE+ QHY+QESA+LRQQI LQNSNR LIGD++ TMSH++LK LE
Sbjct: 339 KKATSDTSSAGTVAEINAQHYQQESAKLRQQITTLQNSNRTLIGDTMATMSHRDLKQLEG 518
Query: 636 RLDKALGKIRAKKNDVLCSEVEYMQRREMELQNDNLYLRSRVDENERAQQ 785
RLDK LGKIRA+KN++L +E+EYMQ+REMEL N+N YLR +V ER QQ
Sbjct: 519 RLDKGLGKIRARKNELLSAEIEYMQKREMELANNNFYLREKVS*TERGQQ 668
Score = 170 bits (365), Expect(2) = 1e-069
Identities = 71/78 (91%), Positives = 75/78 (96%)
Frame = +3 / +3
Query: 249 GKGKTEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANNS 428
G+G+ EIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVAL+VFSSRGRLYEY+NNS
Sbjct: 135 GRGRIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALVVFSSRGRLYEYSNNS 314
Query: 429 VKGTIERYKKATSDNSSA 482
VK TIERYKKATSD SSA
Sbjct: 315 VKATIERYKKATSDTSSA 368
Score = 119 bits (254), Expect = 4e-026
Identities = 62/111 (55%), Positives = 73/111 (65%)
Frame = -3 / -3
Query: 785 LLCPFILINPAP*VQVVILQLHFPSLHVLDFRTQHIVLFCSNLSESFV*PSLQVLKFLVA 606
LL PF L + P V+VVI +LHFP LHVL+F +L CSNLS +FV PSLQ+L VA
Sbjct: 668 LLPPFSLRDFFPQVEVVICKLHFPFLHVLNFSA**FILSCSNLS*AFVQPSLQLL*VSVA 489
Query: 605 HGCDRITYQGPVGVLQVNDLLPQPSRFLLVMLNGDLCNRTSCAGVVTGCLL 453
HG I Y PVGVLQ LLPQ RFLLV+L DLC+ TS GV + L+
Sbjct: 488 HGSHGIAY*SPVGVLQGGYLLPQLCRFLLVVLGIDLCDCTSAGGVTSCLLV 336
Score = 114 bits (243), Expect(2) = 1e-069
Identities = 59/108 (54%), Positives = 71/108 (65%)
Frame = +1 / +1
Query: 466 VTTPAQLVRLQRSPFSITSRNLLG*GSRSLTCRTPTGP**VILSQP*ATRNLSTWRLG*T 645
+ TP LV+ QRS S TSRNL *G+R CRTPTG ** I P*AT S+WR G T
Sbjct: 349 LVTPPALVQSQRSMPSTTSRNLQS*GNR*PPCRTPTGL**AIPWLP*ATET*SSWREGWT 528
Query: 646 KLSERLEQKRTMCCVLKSSTCREGKWSCRMTTCT*GAGLMRMKGHNRQ 789
K ERLEQ+R LK STCR+GKWS ++TT T*G +++KG N +
Sbjct: 529 KA*ERLEQERMNY*ALKLSTCRKGKWSLQITTST*GKKSLKLKGGNNK 672
Score = 112 bits (240), Expect(3) = 1e-051
Identities = 51/79 (64%), Positives = 55/79 (69%)
Frame = -1 / -1
Query: 784 CCALSFSSTRLLKYKLSFCNSISLLCMYSTSEHSTSFFFALIFPRALSNLVSKCLSSLWL 605
CC LS T LK KL F +SISL CMYS S S SFF ALIFPR LS+L S C SLWL
Sbjct: 667 CCPLSV*ETFSLK*KLLFASSISLFCMYSISALSNSFFLALIFPRPLSSLPSSCFRSLWL 488
Query: 604 MVVIESPIRALLEFCKLTI 548
MV + SPIR LLEFCK+ I
Sbjct: 487 MVAMVSPIRVLLEFCKVVI 431
Score = 107 bits (228), Expect(3) = 1e-051
Identities = 50/74 (67%), Positives = 52/74 (70%)
Frame = -1 / -1
Query: 481 ALELSLVAFLYLSMVPFTLLLAYS*RRPRLEKXXXXXXXXXXXXXXXAFLRRPLRRLQKV 302
ALE+SLVAFLYLSMV TLLL YS*RRPRLEK AF R PLRRLQKV
Sbjct: 367 ALEVSLVAFLYLSMVALTLLLEYS*RRPRLEKTTSATSASQSTESSYAFFRSPLRRLQKV 188
Query: 301 TCLLVVFSMRLISV 260
TC VVFSMRLIS+
Sbjct: 187 TCRFVVFSMRLISI 146
Score = 54.2 bits (112), Expect(2) = 1e-052
Identities = 20/24 (83%), Positives = 22/24 (91%)
Frame = +2 / +2
Query: 272 AHREHDQQAGHLLQAPQRPPQEGV 343
AHREHD+ AGHLLQAPQR P+EGV
Sbjct: 158 AHREHDEPAGHLLQAPQRTPEEGV 229
Score = 22.6 bits (43), Expect(3) = 1e-051
Identities = 7/10 (70%), Positives = 8/10 (80%)
Frame = -3 / -3
Query: 803 PHHVRCLLCP 774
PH V+CLL P
Sbjct: 689 PHQVQCLLLP 660
>gb|BU996265.1|BU996265 HM13B01r HM Hordeum vulgare subsp. vulgare cDNA clone HM13B01
5-PRIME, mRNA sequence
Length = 637
Score = 170 bits (365), Expect(2) = 3e-068
Identities = 71/78 (91%), Positives = 75/78 (96%)
Frame = +3 / +2
Query: 249 GKGKTEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANNS 428
G+G+ EIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVAL+VFSSRGRLYEY+NNS
Sbjct: 143 GRGRIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALVVFSSRGRLYEYSNNS 322
Query: 429 VKGTIERYKKATSDNSSA 482
VK TIERYKKATSD SSA
Sbjct: 323 VKATIERYKKATSDTSSA 376
Score = 163 bits (351), Expect(2) = 1e-049
Identities = 65/97 (67%), Positives = 83/97 (85%)
Frame = +3 / +2
Query: 456 KATSDNSSAAGTIAEVTIQHYKQESARLRQQIVNLQNSNRALIGDSITTMSHKELKHLET 635
K + ++S+AGT+AE+ QHY+QESA+LRQQI LQNSNR LIGD++ TMSH++LK LE
Sbjct: 347 KKATSDTSSAGTVAEINAQHYQQESAKLRQQITTLQNSNRTLIGDTMATMSHRDLKQLEG 526
Query: 636 RLDKALGKIRAKKNDVLCSEVEYMQRREMELQNDNLY 746
RLDK LGKIRA+KN++L +E+EYMQRREMELQN+N Y
Sbjct: 527 RLDKGLGKIRARKNELLSAEIEYMQRREMELQNNNFY 637
Score = 119 bits (254), Expect = 4e-026
Identities = 59/98 (60%), Positives = 68/98 (69%)
Frame = -3 / -1
Query: 746 VQVVILQLHFPSLHVLDFRTQHIVLFCSNLSESFV*PSLQVLKFLVAHGCDRITYQGPVG 567
V+VVILQLHFPSLHVL+F +L CSNLS +FV PSLQ+L VAHG I Y PVG
Sbjct: 637 VEVVILQLHFPSLHVLNFSA**FILSCSNLS*AFVQPSLQLL*VSVAHGSHGIAY*SPVG 458
Query: 566 VLQVNDLLPQPSRFLLVMLNGDLCNRTSCAGVVTGCLL 453
VLQ LLPQ RFLLV+L DLC+ TS GV + L+
Sbjct: 457 VLQGGYLLPQLCRFLLVVLGIDLCDCTSAGGVTSCLLV 344
Score = 109 bits (233), Expect(2) = 3e-068
Identities = 56/92 (60%), Positives = 62/92 (67%)
Frame = +1 / +3
Query: 466 VTTPAQLVRLQRSPFSITSRNLLG*GSRSLTCRTPTGP**VILSQP*ATRNLSTWRLG*T 645
+ TP LV+ QRS S TSRNL *G+R CRTPTG ** I P*AT S+WR G T
Sbjct: 357 LVTPPALVQSQRSMPSTTSRNLQS*GNR*PPCRTPTGL**AIPWLP*ATET*SSWREGWT 536
Query: 646 KLSERLEQKRTMCCVLKSSTCREGKWSCRMTT 741
K ERLEQ+R LK STCREGKWSCR+TT
Sbjct: 537 KA*ERLEQERMNY*ALKLSTCREGKWSCRITT 632
Score = 107 bits (228), Expect(2) = 1e-048
Identities = 50/74 (67%), Positives = 52/74 (70%)
Frame = -1 / -2
Query: 481 ALELSLVAFLYLSMVPFTLLLAYS*RRPRLEKXXXXXXXXXXXXXXXAFLRRPLRRLQKV 302
ALE+SLVAFLYLSMV TLLL YS*RRPRLEK AF R PLRRLQKV
Sbjct: 375 ALEVSLVAFLYLSMVALTLLLEYS*RRPRLEKTTSATSASQSTESSYAFFRSPLRRLQKV 196
Query: 301 TCLLVVFSMRLISV 260
TC VVFSMRLIS+
Sbjct: 195 TCRFVVFSMRLISI 154
Score = 107 bits (228), Expect(2) = 1e-048
Identities = 46/65 (70%), Positives = 50/65 (76%)
Frame = -1 / -2
Query: 742 KLSFCNSISLLCMYSTSEHSTSFFFALIFPRALSNLVSKCLSSLWLMVVIESPIRALLEF 563
KL FC+SISLLCMYS S S SFF ALIFPR LS+L S C SLWLMV + SPIR LLEF
Sbjct: 633 KLLFCSSISLLCMYSISALSNSFFLALIFPRPLSSLPSSCFRSLWLMVAMVSPIRVLLEF 454
Query: 562 CKLTI 548
CK+ I
Sbjct: 453 CKVVI 439
Score = 54.2 bits (112), Expect(2) = 1e-049
Identities = 20/24 (83%), Positives = 22/24 (91%)
Frame = +2 / +1
Query: 272 AHREHDQQAGHLLQAPQRPPQEGV 343
AHREHD+ AGHLLQAPQR P+EGV
Sbjct: 166 AHREHDEPAGHLLQAPQRTPEEGV 237
>gb|BG367358.1|BG367358 HVSMEi0011P20f Hordeum vulgare 20 DAP spike EST library HVcDNA0010
(20 DAP) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEi0011P20f, mRNA sequence
Length = 512
Score = 170 bits (365), Expect(2) = 5e-068
Identities = 71/78 (91%), Positives = 75/78 (96%)
Frame = +3 / +2
Query: 249 GKGKTEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANNS 428
G+G+ EIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVAL+VFSSRGRLYEY+NNS
Sbjct: 26 GRGRIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALVVFSSRGRLYEYSNNS 205
Query: 429 VKGTIERYKKATSDNSSA 482
VK TIERYKKATSD SSA
Sbjct: 206 VKATIERYKKATSDTSSA 259
Score = 154 bits (331), Expect(2) = 6e-047
Identities = 62/94 (65%), Positives = 80/94 (85%)
Frame = +3 / +2
Query: 456 KATSDNSSAAGTIAEVTIQHYKQESARLRQQIVNLQNSNRALIGDSITTMSHKELKHLET 635
K + ++S+AGT+AE+ QHY+QESA+LRQQI LQNSNR LIGD++ TMSH++LK LE
Sbjct: 230 KKATSDTSSAGTVAEINAQHYQQESAKLRQQITTLQNSNRTLIGDTMATMSHRDLKQLEG 409
Query: 636 RLDKALGKIRAKKNDVLCSEVEYMQRREMELQND 737
RLDK L KIRA+KN++L +E+EYMQRREMELQN+
Sbjct: 410 RLDKGLXKIRARKNELLSAEIEYMQRREMELQNN 511
Score = 114 bits (244), Expect = 1e-024
Identities = 57/95 (60%), Positives = 65/95 (68%)
Frame = -3 / -2
Query: 737 VILQLHFPSLHVLDFRTQHIVLFCSNLSESFV*PSLQVLKFLVAHGCDRITYQGPVGVLQ 558
VILQLHFPSLHVL+F +L CSNLS +FV PSLQ+L VAHG I Y PVGVLQ
Sbjct: 511 VILQLHFPSLHVLNFSA**FILSCSNLS*AFVQPSLQLL*VSVAHGSHGIAY*SPVGVLQ 332
Query: 557 VNDLLPQPSRFLLVMLNGDLCNRTSCAGVVTGCLL 453
LLPQ RFLLV+L DLC+ TS GV + L+
Sbjct: 331 GGYLLPQLCRFLLVVLGIDLCDCTSAGGVTSCLLV 227
Score = 109 bits (232), Expect(2) = 5e-068
Identities = 55/91 (60%), Positives = 61/91 (67%)
Frame = +1 / +3
Query: 466 VTTPAQLVRLQRSPFSITSRNLLG*GSRSLTCRTPTGP**VILSQP*ATRNLSTWRLG*T 645
+ TP LV+ QRS S TSRNL *G+R CRTPTG ** I P*AT S+WR G T
Sbjct: 240 LVTPPALVQSQRSMPSTTSRNLQS*GNR*PPCRTPTGL**AIPWLP*ATET*SSWREGWT 419
Query: 646 KLSERLEQKRTMCCVLKSSTCREGKWSCRMT 738
K ERLEQ+R LK STCREGKWSCR+T
Sbjct: 420 KAXERLEQERMNY*ALKLSTCREGKWSCRIT 512
Score = 107 bits (228), Expect(2) = 2e-046
Identities = 50/74 (67%), Positives = 52/74 (70%)
Frame = -1 / -3
Query: 481 ALELSLVAFLYLSMVPFTLLLAYS*RRPRLEKXXXXXXXXXXXXXXXAFLRRPLRRLQKV 302
ALE+SLVAFLYLSMV TLLL YS*RRPRLEK AF R PLRRLQKV
Sbjct: 258 ALEVSLVAFLYLSMVALTLLLEYS*RRPRLEKTTSATSASQSTESSYAFFRSPLRRLQKV 79
Query: 301 TCLLVVFSMRLISV 260
TC VVFSMRLIS+
Sbjct: 78 TCRFVVFSMRLISI 37
Score = 100 bits (212), Expect(2) = 2e-046
Identities = 43/62 (69%), Positives = 47/62 (75%)
Frame = -1 / -3
Query: 733 FCNSISLLCMYSTSEHSTSFFFALIFPRALSNLVSKCLSSLWLMVVIESPIRALLEFCKL 554
FC+SISLLCMYS S S SFF ALIF R LS+L S C SLWLMV + SPIR LLEFCK+
Sbjct: 507 FCSSISLLCMYSISALSNSFFLALIFXRPLSSLPSSCFRSLWLMVAMVSPIRVLLEFCKV 328
Query: 553 TI 548
I
Sbjct: 327 VI 322
Score = 54.2 bits (112), Expect(2) = 6e-047
Identities = 20/24 (83%), Positives = 22/24 (91%)
Frame = +2 / +1
Query: 272 AHREHDQQAGHLLQAPQRPPQEGV 343
AHREHD+ AGHLLQAPQR P+EGV
Sbjct: 49 AHREHDEPAGHLLQAPQRTPEEGV 120
>gb|BI948755.1|BI948755 HVSMEl0010L12f Hordeum vulgare spike EST library HVcDNA0012
(Fusarium infected) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEl0010L12f, mRNA sequence
Length = 854
Score = 166 bits (357), Expect(3) = 2e-066
Identities = 69/78 (88%), Positives = 74/78 (94%)
Frame = +3 / +3
Query: 249 GKGKTEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANNS 428
G+G+ EI R+ENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVAL+VFSSRGRLYEY+NNS
Sbjct: 141 GRGRIEIGRVENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALVVFSSRGRLYEYSNNS 320
Query: 429 VKGTIERYKKATSDNSSA 482
VK TIERYKKATSD SSA
Sbjct: 321 VKATIERYKKATSDTSSA 374
Score = 111 bits (238), Expect(3) = 4e-041
Identities = 46/74 (62%), Positives = 60/74 (81%)
Frame = +3 / +3
Query: 456 KATSDNSSAAGTIAEVTIQHYKQESARLRQQIVNLQNSNRALIGDSITTMSHKELKHLET 635
K + ++S+AGT+AE+ QHY+QESA+LRQQI LQNSNR LIGD++ TMSH++LK LE
Sbjct: 345 KKATSDTSSAGTVAEINAQHYQQESAKLRQQITTLQNSNRTLIGDTMATMSHRDLKQLEG 524
Query: 636 RLDKALGKIRAKKN 677
RLDK L KI A++N
Sbjct: 525 RLDKGL*KIIAREN 566
Score = 101 bits (215), Expect(3) = 6e-042
Identities = 48/74 (64%), Positives = 50/74 (67%)
Frame = -1 / -2
Query: 481 ALELSLVAFLYLSMVPFTLLLAYS*RRPRLEKXXXXXXXXXXXXXXXAFLRRPLRRLQKV 302
ALE+SLVAFLYLSMV TLLL YS*RRPRLEK AF R PLRRLQKV
Sbjct: 373 ALEVSLVAFLYLSMVALTLLLEYS*RRPRLEKTTSATSASQSTESSYAFFRSPLRRLQKV 194
Query: 301 TCLLVVFSMRLISV 260
TC VVFS R IS+
Sbjct: 193 TCRFVVFSTRPISI 152
Score = 84.5 bits (178), Expect(2) = 4e-021
Identities = 45/89 (50%), Positives = 53/89 (59%)
Frame = -3 / -1
Query: 719 FPSLHVLDFRTQHIVLFCSNLSESFV*PSLQVLKFLVAHGCDRITYQGPVGVLQVNDLLP 540
FP F+ +L C NLS +FV PSLQ+L VAHG I Y PVGVLQ LLP
Sbjct: 608 FPFSACTQFQRLVSILSCYNLS*AFVQPSLQLL*VSVAHGSHGIAY*SPVGVLQGGYLLP 429
Query: 539 QPSRFLLVMLNGDLCNRTSCAGVVTGCLL 453
Q RFLLV+L DLC+ TS GV + L+
Sbjct: 428 QLCRFLLVVLGIDLCDCTSAGGVTSCLLV 342
Score = 71.2 bits (149), Expect(3) = 2e-066
Identities = 40/70 (57%), Positives = 45/70 (64%)
Frame = +1 / +1
Query: 466 VTTPAQLVRLQRSPFSITSRNLLG*GSRSLTCRTPTGP**VILSQP*ATRNLSTWRLG*T 645
+ TP LV+ QRS S TSRNL *G+R CRTPTG ** I P*AT S+WR G T
Sbjct: 355 LVTPPALVQSQRSMPSTTSRNLQS*GNR*PPCRTPTGL**AIPWLP*ATET*SSWREGWT 534
Query: 646 KLSERLEQKR 675
K ERL Q+R
Sbjct: 535 KAYERL*QER 564
Score = 64.3 bits (134), Expect(3) = 6e-042
Identities = 27/43 (62%), Positives = 31/43 (72%)
Frame = -1 / -2
Query: 676 FFFALIFPRALSNLVSKCLSSLWLMVVIESPIRALLEFCKLTI 548
F A+IF R LS+L S C SLWLMV + SPIR LLEFCK+ I
Sbjct: 565 FSLAIIFHRPLSSLPSSCFRSLWLMVAMVSPIRVLLEFCKVVI 437
Score = 55.1 bits (114), Expect(3) = 2e-066
Identities = 22/40 (55%), Positives = 29/40 (72%)
Frame = +3 / +2
Query: 666 AKKNDVLCSEVEYMQRREMELQNDNLYLRSRVDENERAQQ 785
+K+ +L +E+EYMQRRE LQN+N YLR +V E ER Q
Sbjct: 554 SKREWILSAEIEYMQRRERGLQNNNFYLREKVAETERGPQ 673
Score = 48.3 bits (99), Expect(3) = 4e-041
Identities = 20/33 (60%), Positives = 25/33 (75%)
Frame = +1 / +3
Query: 691 LKSSTCREGKWSCRMTTCT*GAGLMRMKGHNRQ 789
LK STCREGK CR+TT T*G +R+KG +R+
Sbjct: 579 LKLSTCREGKGGCRITTFT*GKKWLRLKGGHRR 677
Score = 47.3 bits (97), Expect(3) = 4e-041
Identities = 18/24 (75%), Positives = 20/24 (83%)
Frame = +2 / +2
Query: 272 AHREHDQQAGHLLQAPQRPPQEGV 343
A EHD+ AGHLLQAPQR P+EGV
Sbjct: 164 ARGEHDEPAGHLLQAPQRTPEEGV 235
Score = 44.6 bits (91), Expect(3) = 6e-042
Identities = 18/31 (58%), Positives = 20/31 (64%)
Frame = -2 / -1
Query: 783 VVPFHSHQPGSLSTSCHSATPFPFSACTRLQ 691
V PF S S SC+SA PFPFSACT+ Q
Sbjct: 671 VAPFQSQPLFPSSKSCYSAAPFPFSACTQFQ 579
Score = 37.7 bits (76), Expect(2) = 4e-021
Identities = 18/28 (64%), Positives = 21/28 (75%)
Frame = -3 / -2
Query: 776 PFILINPAP*VQVVILQLHFPSLHVLDF 693
PF L + P V+VVILQ FPSLHVL+F
Sbjct: 664 PFSLSHFFPQVKVVILQPPFPSLHVLNF 581
>gb|BU975486.1|BU975486 HB31F02r BC Hordeum vulgare subsp. vulgare cDNA clone HB31F02
5-PRIME, mRNA sequence
Length = 501
Score = 170 bits (366), Expect(2) = 9e-052
Identities = 68/102 (66%), Positives = 87/102 (85%)
Frame = +3 / +1
Query: 456 KATSDNSSAAGTIAEVTIQHYKQESARLRQQIVNLQNSNRALIGDSITTMSHKELKHLET 635
K + ++S+AGT+AE+ QHY+QESA+LRQQI LQNSNR LIGD++ TMSH++LK LE
Sbjct: 193 KKATSDTSSAGTVAEINAQHYQQESAKLRQQITTLQNSNRTLIGDTMATMSHRDLKQLEG 372
Query: 636 RLDKALGKIRAKKNDVLCSEVEYMQRREMELQNDNLYLRSRV 761
RLDK LGKIRA+KN++L +E+EYMQRREMELQN+N YLR +V
Sbjct: 373 RLDKGLGKIRARKNELLSAEIEYMQRREMELQNNNFYLREKV 498
Score = 157 bits (337), Expect(2) = 7e-066
Identities = 66/71 (92%), Positives = 69/71 (97%)
Frame = +3 / +1
Query: 270 KRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANNSVKGTIER 449
+RIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVAL+VFSSRGRLYEY+NNSVK TIER
Sbjct: 10 ERIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALVVFSSRGRLYEYSNNSVKATIER 189
Query: 450 YKKATSDNSSA 482
YKKATSD SSA
Sbjct: 190 YKKATSDTSSA 222
Score = 120 bits (257), Expect = 2e-026
Identities = 60/100 (60%), Positives = 69/100 (69%)
Frame = -3 / -1
Query: 752 P*VQVVILQLHFPSLHVLDFRTQHIVLFCSNLSESFV*PSLQVLKFLVAHGCDRITYQGP 573
P V+VVILQLHFPSLHVL+F +L CSNLS +FV PSLQ+L VAHG I Y P
Sbjct: 489 PQVEVVILQLHFPSLHVLNFSA**FILSCSNLS*AFVQPSLQLL*VSVAHGSHGIAY*SP 310
Query: 572 VGVLQVNDLLPQPSRFLLVMLNGDLCNRTSCAGVVTGCLL 453
VGVLQ LLPQ RFLLV+L DLC+ TS GV + L+
Sbjct: 309 VGVLQGGYLLPQLCRFLLVVLGIDLCDCTSAGGVTSCLLV 190
Score = 114 bits (244), Expect(2) = 7e-066
Identities = 59/96 (61%), Positives = 65/96 (67%)
Frame = +1 / +2
Query: 466 VTTPAQLVRLQRSPFSITSRNLLG*GSRSLTCRTPTGP**VILSQP*ATRNLSTWRLG*T 645
+ TP LV+ QRS S TSRNL *G+R CRTPTG ** I P*AT S+WR G T
Sbjct: 203 LVTPPALVQSQRSMPSTTSRNLQS*GNR*PPCRTPTGL**AIPWLP*ATET*SSWREGWT 382
Query: 646 KLSERLEQKRTMCCVLKSSTCREGKWSCRMTTCT*G 753
K ERLEQ+R LK STCREGKWSCR+TT T*G
Sbjct: 383 KA*ERLEQERMNY*ALKLSTCREGKWSCRITTST*G 490
Score = 110 bits (234), Expect(2) = 2e-047
Identities = 49/72 (68%), Positives = 54/72 (75%)
Frame = -1 / -2
Query: 763 STRLLKYKLSFCNSISLLCMYSTSEHSTSFFFALIFPRALSNLVSKCLSSLWLMVVIESP 584
+T LK KL FC+SISLLCMYS S S SFF ALIFPR LS+L S C SLWLMV + SP
Sbjct: 500 ATFSLK*KLLFCSSISLLCMYSISALSNSFFLALIFPRPLSSLPSSCFRSLWLMVAMVSP 321
Query: 583 IRALLEFCKLTI 548
IR LLEFCK+ I
Sbjct: 320 IRVLLEFCKVVI 285
Score = 100 bits (213), Expect(2) = 2e-047
Identities = 47/70 (67%), Positives = 48/70 (68%)
Frame = -1 / -2
Query: 481 ALELSLVAFLYLSMVPFTLLLAYS*RRPRLEKXXXXXXXXXXXXXXXAFLRRPLRRLQKV 302
ALE+SLVAFLYLSMV TLLL YS*RRPRLEK AF R PLRRLQKV
Sbjct: 221 ALEVSLVAFLYLSMVALTLLLEYS*RRPRLEKTTSATSASQSTESSYAFFRSPLRRLQKV 42
Query: 301 TCLLVVFSMR 272
TC VVFSMR
Sbjct: 41 TCRFVVFSMR 12
Score = 54.2 bits (112), Expect(2) = 9e-052
Identities = 20/24 (83%), Positives = 22/24 (91%)
Frame = +2 / +3
Query: 272 AHREHDQQAGHLLQAPQRPPQEGV 343
AHREHD+ AGHLLQAPQR P+EGV
Sbjct: 12 AHREHDEPAGHLLQAPQRTPEEGV 83
>gb|BU982429.1|BU982429 HA26I11r HA Hordeum vulgare subsp. vulgare cDNA clone HA26I11
5-PRIME, mRNA sequence
Length = 584
Score = 250 bits (541), Expect = 1e-065
Identities = 103/159 (64%), Positives = 139/159 (87%)
Frame = +3 / +1
Query: 249 GKGKTEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANNS 428
G+G+ EIKRIENTT+RQVTFCKRRNGLLKKAYELSVLC+AE+ALIVFS+RGRLYEYA+NS
Sbjct: 106 GRGRIEIKRIENTTSRQVTFCKRRNGLLKKAYELSVLCEAEIALIVFSARGRLYEYASNS 285
Query: 429 VKGTIERYKKATSDNSSAAGTIAEVTIQHYKQESARLRQQIVNLQNSNRALIGDSITTMS 608
+ TI+RYKKA++ +S +A I + Q+++QESA+LRQQI++LQN+NR L+GDS+ ++
Sbjct: 286 TRTTIDRYKKASASSSGSAPAIDVNSQQYFQQESAKLRQQILSLQNANRHLMGDSVGNLT 465
Query: 609 HKELKHLETRLDKALGKIRAKKNDVLCSEVEYMQRREME 725
KELK LE RLDK++G+IR+KK+++L +E+EYMQ+ E +
Sbjct: 466 VKELKTLENRLDKSIGRIRSKKHELLSAEIEYMQKLEAD 582
Score = 73.5 bits (154), Expect(2) = 4e-024
Identities = 38/67 (56%), Positives = 41/67 (61%)
Frame = -1 / -1
Query: 460 AFLYLSMVPFTLLLAYS*RRPRLEKXXXXXXXXXXXXXXXAFLRRPLRRLQKVTCLLVVF 281
AFLYLS+V LLLAYS*RRPR EK AFL P RLQKVT LVVF
Sbjct: 317 AFLYLSIVVLVLLLAYS*RRPRAEKTIKAISASQRTESS*AFLSSPFLRLQKVTWRLVVF 138
Query: 280 SMRLISV 260
S+ LIS+
Sbjct: 137 SILLISI 117
Score = 58.8 bits (122), Expect(2) = 4e-024
Identities = 29/59 (49%), Positives = 37/59 (62%)
Frame = -1 / -1
Query: 724 SISLLCMYSTSEHSTSFFFALIFPRALSNLVSKCLSSLWLMVVIESPIRALLEFCKLTI 548
S S CMYS S S+S FF I P LS+ S+ LSSL + + ESPI+ LL FC+ +I
Sbjct: 581 SASSFCMYSISADSSSCFFDRIRPMLLSSRFSRVLSSLTVKLPTESPIKCLLAFCRDSI 405
>gb|AL506894.1|AL506894 AL506894 Hordeum vulgare Barke developing caryopsis (3.-15.DAP)
Hordeum vulgare subsp. vulgare cDNA clone HY04I23T 5',
mRNA sequence
Length = 700
Score = 170 bits (365), Expect(3) = 4e-065
Identities = 71/78 (91%), Positives = 75/78 (96%)
Frame = +3 / +2
Query: 249 GKGKTEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANNS 428
G+G+ EIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVAL+VFSSRGRLYEY+NNS
Sbjct: 191 GRGRIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALVVFSSRGRLYEYSNNS 370
Query: 429 VKGTIERYKKATSDNSSA 482
VK TIERYKKATSD SSA
Sbjct: 371 VKATIERYKKATSDTSSA 424
Score = 119 bits (254), Expect(3) = 3e-041
Identities = 48/73 (65%), Positives = 61/73 (83%)
Frame = +3 / +2
Query: 456 KATSDNSSAAGTIAEVTIQHYKQESARLRQQIVNLQNSNRALIGDSITTMSHKELKHLET 635
K + ++S+AGT+AE+ QHY+QESA+LRQQI LQNSNR LIGD++ TMSH++LK LE
Sbjct: 395 KKATSDTSSAGTVAEINAQHYQQESAKLRQQITTLQNSNRTLIGDTMATMSHRDLKQLEG 574
Query: 636 RLDKALGKIRAKK 674
RLDK LGKIRA+K
Sbjct: 575 RLDKGLGKIRARK 613
Score = 107 bits (228), Expect(3) = 2e-045
Identities = 50/74 (67%), Positives = 52/74 (70%)
Frame = -1 / -2
Query: 481 ALELSLVAFLYLSMVPFTLLLAYS*RRPRLEKXXXXXXXXXXXXXXXAFLRRPLRRLQKV 302
ALE+SLVAFLYLSMV TLLL YS*RRPRLEK AF R PLRRLQKV
Sbjct: 423 ALEVSLVAFLYLSMVALTLLLEYS*RRPRLEKTTSATSASQSTESSYAFFRSPLRRLQKV 244
Query: 301 TCLLVVFSMRLISV 260
TC VVFSMRLIS+
Sbjct: 243 TCRFVVFSMRLISI 202
Score = 83.1 bits (175), Expect(2) = 2e-022
Identities = 42/72 (58%), Positives = 48/72 (66%)
Frame = -3 / -1
Query: 668 CSNLSESFV*PSLQVLKFLVAHGCDRITYQGPVGVLQVNDLLPQPSRFLLVMLNGDLCNR 489
CSNLS +FV PSLQ+L VAHG I Y PVGVLQ LLPQ RFLLV+L DLC+
Sbjct: 607 CSNLS*AFVQPSLQLL*VSVAHGSHGIAY*SPVGVLQGGYLLPQLCRFLLVVLGIDLCDC 428
Query: 488 TSCAGVVTGCLL 453
TS GV + L+
Sbjct: 427 TSAGGVTSCLLV 392
Score = 73.0 bits (153), Expect(3) = 4e-065
Identities = 40/70 (57%), Positives = 46/70 (65%)
Frame = +1 / +3
Query: 466 VTTPAQLVRLQRSPFSITSRNLLG*GSRSLTCRTPTGP**VILSQP*ATRNLSTWRLG*T 645
+ TP LV+ QRS S TSRNL *G+R CRTPTG ** I P*AT S+WR G T
Sbjct: 405 LVTPPALVQSQRSMPSTTSRNLQS*GNR*PPCRTPTGL**AIPWLP*ATET*SSWREGWT 584
Query: 646 KLSERLEQKR 675
K ERLEQ++
Sbjct: 585 KA*ERLEQEK 614
Score = 70.3 bits (147), Expect(3) = 2e-045
Identities = 29/42 (69%), Positives = 32/42 (76%)
Frame = -1 / -2
Query: 673 FFALIFPRALSNLVSKCLSSLWLMVVIESPIRALLEFCKLTI 548
F ALIFPR LS+L S C SLWLMV + SPIR LLEFCK+ I
Sbjct: 612 FLALIFPRPLSSLPSSCFRSLWLMVAMVSPIRVLLEFCKVVI 487
Score = 54.2 bits (112), Expect(3) = 3e-041
Identities = 20/24 (83%), Positives = 22/24 (91%)
Frame = +2 / +1
Query: 272 AHREHDQQAGHLLQAPQRPPQEGV 343
AHREHD+ AGHLLQAPQR P+EGV
Sbjct: 214 AHREHDEPAGHLLQAPQRTPEEGV 285
Score = 45.1 bits (92), Expect(3) = 4e-065
Identities = 18/27 (66%), Positives = 20/27 (74%)
Frame = +1 / +1
Query: 667 QKRTMCCVLKSSTCREGKWSCRMTTCT 747
+KR LK STCREGKWSCR+TT T
Sbjct: 607 KKRMNY*ALKLSTCREGKWSCRITTST 687
Score = 44.1 bits (90), Expect(3) = 2e-045
Identities = 17/27 (62%), Positives = 19/27 (70%)
Frame = -2 / -2
Query: 747 STSCHSATPFPFSACTRLQNTAHRSFL 667
S SC+SA PFPFSACT+ Q SFL
Sbjct: 687 SRSCYSAAPFPFSACTQFQRLVIHSFL 607
Score = 43.2 bits (88), Expect(2) = 2e-022
Identities = 19/26 (73%), Positives = 20/26 (76%)
Frame = -1 / -1
Query: 748 KYKLSFCNSISLLCMYSTSEHSTSFF 671
K KL FC+SISLLCMYS S S SFF
Sbjct: 688 K*KLLFCSSISLLCMYSISALSNSFF 611
Score = 34.5 bits (69), Expect(3) = 3e-041
Identities = 17/28 (60%), Positives = 21/28 (75%)
Frame = +2 / +2
Query: 665 SKKERCAVF*SRVHAEKGNGVAE*QLVL 748
++KE *+ VHAEKGNG AE*QL+L
Sbjct: 605 ARKE*ITKR*N*VHAEKGNGAAE*QLLL 688
>gb|CA024629.1|CA024629 HZ49N15r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ49N15
5-PRIME, mRNA sequence
Length = 633
Score = 170 bits (365), Expect(2) = 9e-065
Identities = 71/78 (91%), Positives = 75/78 (96%)
Frame = +3 / +1
Query: 249 GKGKTEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANNS 428
G+G+ EIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVAL+VFSSRGRLYEY+NNS
Sbjct: 157 GRGRIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALVVFSSRGRLYEYSNNS 336
Query: 429 VKGTIERYKKATSDNSSA 482
VK TIERYKKATSD SSA
Sbjct: 337 VKATIERYKKATSDTSSA 390
Score = 152 bits (326), Expect(2) = 3e-046
Identities = 61/91 (67%), Positives = 78/91 (85%)
Frame = +3 / +1
Query: 456 KATSDNSSAAGTIAEVTIQHYKQESARLRQQIVNLQNSNRALIGDSITTMSHKELKHLET 635
K + ++S+AGT+AE+ QHY+QESA+LRQQI LQNSNR LIGD++ TMSH++LK LE
Sbjct: 361 KKATSDTSSAGTVAEINAQHYQQESAKLRQQITTLQNSNRTLIGDTMATMSHRDLKQLEG 540
Query: 636 RLDKALGKIRAKKNDVLCSEVEYMQRREMEL 728
RLDK LGKIRA+KN++L +E+EYMQRREMEL
Sbjct: 541 RLDKGLGKIRARKNELLSAEIEYMQRREMEL 633
Score = 109 bits (232), Expect = 4e-023
Identities = 54/92 (58%), Positives = 62/92 (67%)
Frame = -3 / -1
Query: 728 QLHFPSLHVLDFRTQHIVLFCSNLSESFV*PSLQVLKFLVAHGCDRITYQGPVGVLQVND 549
QLHFPSLHVL+F +L CSNLS +FV PSLQ+L VAHG I Y PVGVLQ
Sbjct: 633 QLHFPSLHVLNFSA**FILSCSNLS*AFVQPSLQLL*VSVAHGSHGIAY*SPVGVLQGGY 454
Query: 548 LLPQPSRFLLVMLNGDLCNRTSCAGVVTGCLL 453
LLPQ RFLLV+L DLC+ TS GV + L+
Sbjct: 453 LLPQLCRFLLVVLGIDLCDCTSAGGVTSCLLV 358
Score = 107 bits (228), Expect(2) = 1e-045
Identities = 50/74 (67%), Positives = 52/74 (70%)
Frame = -1 / -2
Query: 481 ALELSLVAFLYLSMVPFTLLLAYS*RRPRLEKXXXXXXXXXXXXXXXAFLRRPLRRLQKV 302
ALE+SLVAFLYLSMV TLLL YS*RRPRLEK AF R PLRRLQKV
Sbjct: 389 ALEVSLVAFLYLSMVALTLLLEYS*RRPRLEKTTSATSASQSTESSYAFFRSPLRRLQKV 210
Query: 301 TCLLVVFSMRLISV 260
TC VVFSMRLIS+
Sbjct: 209 TCRFVVFSMRLISI 168
Score = 98.2 bits (208), Expect(2) = 9e-065
Identities = 52/87 (59%), Positives = 57/87 (65%)
Frame = +1 / +2
Query: 466 VTTPAQLVRLQRSPFSITSRNLLG*GSRSLTCRTPTGP**VILSQP*ATRNLSTWRLG*T 645
+ TP LV+ QRS S TSRNL *G+R CRTPTG ** I P*AT S+WR G T
Sbjct: 371 LVTPPALVQSQRSMPSTTSRNLQS*GNR*PPCRTPTGL**AIPWLP*ATET*SSWREGWT 550
Query: 646 KLSERLEQKRTMCCVLKSSTCREGKWS 726
K ERLEQ+R LK STCREGKWS
Sbjct: 551 KA*ERLEQERMNY*ALKLSTCREGKWS 631
Score = 97.3 bits (206), Expect(2) = 1e-045
Identities = 42/60 (70%), Positives = 46/60 (76%)
Frame = -1 / -2
Query: 727 NSISLLCMYSTSEHSTSFFFALIFPRALSNLVSKCLSSLWLMVVIESPIRALLEFCKLTI 548
+SISLLCMYS S S SFF ALIFPR LS+L S C SLWLMV + SPIR LLEFCK+ I
Sbjct: 632 SSISLLCMYSISALSNSFFLALIFPRPLSSLPSSCFRSLWLMVAMVSPIRVLLEFCKVVI 453
Score = 54.2 bits (112), Expect(2) = 3e-046
Identities = 20/24 (83%), Positives = 22/24 (91%)
Frame = +2 / +3
Query: 272 AHREHDQQAGHLLQAPQRPPQEGV 343
AHREHD+ AGHLLQAPQR P+EGV
Sbjct: 180 AHREHDEPAGHLLQAPQRTPEEGV 251
>gb|CA026169.1|CA026169 HZ55C06r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ55C06
5-PRIME, mRNA sequence
Length = 505
Score = 181 bits (389), Expect(2) = 6e-050
Identities = 73/110 (66%), Positives = 92/110 (83%)
Frame = +3 / +1
Query: 456 KATSDNSSAAGTIAEVTIQHYKQESARLRQQIVNLQNSNRALIGDSITTMSHKELKHLET 635
K + ++S+AGT+AE+ QHY+QESA+LRQQI LQNSNR LIGD++ TMSH++LK LE
Sbjct: 175 KKATSDTSSAGTVAEINAQHYQQESAKLRQQITTLQNSNRTLIGDTMATMSHRDLKQLEG 354
Query: 636 RLDKALGKIRAKKNDVLCSEVEYMQRREMELQNDNLYLRSRVDENERAQQ 785
RLDK LGKIRA+KN++L +E+EYMQRREMELQN+N YLR +V E ER QQ
Sbjct: 355 RLDKGLGKIRARKNELLSAEIEYMQRREMELQNNNFYLREKVAETERXQQ 504
Score = 143 bits (306), Expect(2) = 3e-064
Identities = 60/64 (93%), Positives = 62/64 (96%)
Frame = +3 / +1
Query: 291 NRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANNSVKGTIERYKKATSD 470
NRQVTFCKRRNGLLKKAYELSVLCDAEVAL+VFSSRGRLYEY+NNSVK TIERYKKATSD
Sbjct: 13 NRQVTFCKRRNGLLKKAYELSVLCDAEVALVVFSSRGRLYEYSNNSVKATIERYKKATSD 192
Query: 471 NSSA 482
SSA
Sbjct: 193 TSSA 204
Score = 126 bits (270), Expect = 3e-028
Identities = 65/111 (58%), Positives = 75/111 (67%)
Frame = -3 / -2
Query: 785 LLCPFILINPAP*VQVVILQLHFPSLHVLDFRTQHIVLFCSNLSESFV*PSLQVLKFLVA 606
LL PF L + P V+VVILQLHFPSLHVL+F +L CSNLS +FV PSLQ+L VA
Sbjct: 504 LLPPFSLSDFFPQVEVVILQLHFPSLHVLNFSA**FILSCSNLS*AFVQPSLQLL*VSVA 325
Query: 605 HGCDRITYQGPVGVLQVNDLLPQPSRFLLVMLNGDLCNRTSCAGVVTGCLL 453
HG I Y PVGVLQ LLPQ RFLLV+L DLC+ TS GV + L+
Sbjct: 324 HGSHGIAY*SPVGVLQGGYLLPQLCRFLLVVLGIDLCDCTSAGGVTSCLLV 172
Score = 123 bits (263), Expect(2) = 3e-064
Identities = 63/106 (59%), Positives = 71/106 (66%)
Frame = +1 / +2
Query: 466 VTTPAQLVRLQRSPFSITSRNLLG*GSRSLTCRTPTGP**VILSQP*ATRNLSTWRLG*T 645
+ TP LV+ QRS S TSRNL *G+R CRTPTG ** I P*AT S+WR G T
Sbjct: 185 LVTPPALVQSQRSMPSTTSRNLQS*GNR*PPCRTPTGL**AIPWLP*ATET*SSWREGWT 364
Query: 646 KLSERLEQKRTMCCVLKSSTCREGKWSCRMTTCT*GAGLMRMKGHN 783
K ERLEQ+R LK STCREGKWSCR+TT T*G +R+KG N
Sbjct: 365 KA*ERLEQERMNY*ALKLSTCREGKWSCRITTST*GKKSLRLKGGN 502
Score = 123 bits (263), Expect(2) = 6e-048
Identities = 54/79 (68%), Positives = 59/79 (74%)
Frame = -1 / -3
Query: 784 CCALSFSSTRLLKYKLSFCNSISLLCMYSTSEHSTSFFFALIFPRALSNLVSKCLSSLWL 605
CC LS S+T LK KL FC+SISLLCMYS S S SFF ALIFPR LS+L S C SLWL
Sbjct: 503 CCXLSVSATFSLK*KLLFCSSISLLCMYSISALSNSFFLALIFPRPLSSLPSSCFRSLWL 324
Query: 604 MVVIESPIRALLEFCKLTI 548
MV + SPIR LLEFCK+ I
Sbjct: 323 MVAMVSPIRVLLEFCKVVI 267
Score = 88.6 bits (187), Expect(2) = 6e-048
Identities = 41/62 (66%), Positives = 42/62 (67%)
Frame = -1 / -3
Query: 481 ALELSLVAFLYLSMVPFTLLLAYS*RRPRLEKXXXXXXXXXXXXXXXAFLRRPLRRLQKV 302
ALE+SLVAFLYLSMV TLLL YS*RRPRLEK AF R PLRRLQKV
Sbjct: 203 ALEVSLVAFLYLSMVALTLLLEYS*RRPRLEKTTSATSASQSTESSYAFFRSPLRRLQKV 24
Query: 301 TC 296
TC
Sbjct: 23 TC 18
Score = 83.1 bits (175), Expect(2) = 7e-021
Identities = 44/101 (43%), Positives = 51/101 (50%)
Frame = -2 / -1
Query: 786 SVVPFHSHQPGSLSTSCHSATPFPFSACTRLQNTAHRSFLL*SFRELCLT*SPSA*VPCG 607
+V F S + S SC+SA PFPFSACT+ Q SFLL*SF LC P+A CG
Sbjct: 505 AVAXFQSQRLFPSSRSCYSAAPFPFSACTQFQRLVIHSFLL*SFLGLCPAFPPAALGLCG 326
Query: 606 SWL**NHLSGPCWXXXXXXXXXXX*QIPACNAEW*PLQSYQ 484
SW L CW QIPA +A * L+ YQ
Sbjct: 325 SW*PWYRLLESCWSSARWLSVASALQIPAGSAGH*SLRLYQ 203
Score = 38.2 bits (77), Expect(2) = 7e-021
Identities = 12/16 (75%), Positives = 12/16 (75%)
Frame = -2 / -1
Query: 480 RWSCHWLPSCTSQWCP 433
RW CH LPSC SQW P
Sbjct: 202 RWRCH*LPSCISQWLP 155
Score = 37.7 bits (76), Expect(2) = 6e-050
Identities = 14/18 (77%), Positives = 16/18 (88%)
Frame = +2 / +3
Query: 290 QQAGHLLQAPQRPPQEGV 343
+ AGHLLQAPQR P+EGV
Sbjct: 12 EPAGHLLQAPQRTPEEGV 65
>gb|AL506480.1|AL506480 AL506480 Hordeum vulgare Barke developing caryopsis (3.-15.DAP)
Hordeum vulgare subsp. vulgare cDNA clone HY03E14T 5',
mRNA sequence
Length = 700
Score = 170 bits (365), Expect(3) = 1e-063
Identities = 71/78 (91%), Positives = 75/78 (96%)
Frame = +3 / +1
Query: 249 GKGKTEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANNS 428
G+G+ EIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVAL+VFSSRGRLYEY+NNS
Sbjct: 112 GRGRIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALVVFSSRGRLYEYSNNS 291
Query: 429 VKGTIERYKKATSDNSSA 482
VK TIERYKKATSD SSA
Sbjct: 292 VKATIERYKKATSDTSSA 345
Score = 143 bits (307), Expect(3) = 6e-045
Identities = 57/87 (65%), Positives = 74/87 (85%)
Frame = +3 / +1
Query: 456 KATSDNSSAAGTIAEVTIQHYKQESARLRQQIVNLQNSNRALIGDSITTMSHKELKHLET 635
K + ++S+AGT+AE+ QHY+QESA+LRQQI LQNSNR LIGD++ TMSH++LK LE
Sbjct: 316 KKATSDTSSAGTVAEINAQHYQQESAKLRQQITTLQNSNRTLIGDTMATMSHRDLKQLEG 495
Query: 636 RLDKALGKIRAKKNDVLCSEVEYMQRR 716
RLDK LGKIRA+KN++L +E+EYMQRR
Sbjct: 496 RLDKGLGKIRARKNELLSAEIEYMQRR 576
Score = 107 bits (228), Expect(2) = 6e-044
Identities = 50/74 (67%), Positives = 52/74 (70%)
Frame = -1 / -3
Query: 481 ALELSLVAFLYLSMVPFTLLLAYS*RRPRLEKXXXXXXXXXXXXXXXAFLRRPLRRLQKV 302
ALE+SLVAFLYLSMV TLLL YS*RRPRLEK AF R PLRRLQKV
Sbjct: 344 ALEVSLVAFLYLSMVALTLLLEYS*RRPRLEKTTSATSASQSTESSYAFFRSPLRRLQKV 165
Query: 301 TCLLVVFSMRLISV 260
TC VVFSMRLIS+
Sbjct: 164 TCRFVVFSMRLISI 123
Score = 91.3 bits (193), Expect(2) = 6e-044
Identities = 39/56 (69%), Positives = 42/56 (75%)
Frame = -1 / -3
Query: 715 LLCMYSTSEHSTSFFFALIFPRALSNLVSKCLSSLWLMVVIESPIRALLEFCKLTI 548
LLCMYS S S SFF ALIFPR LS+L S C SLWLMV + SPIR LLEFCK+ I
Sbjct: 575 LLCMYSISALSNSFFLALIFPRPLSSLPSSCFRSLWLMVAMVSPIRVLLEFCKVVI 408
Score = 89.5 bits (189), Expect(3) = 1e-063
Identities = 49/85 (57%), Positives = 55/85 (64%)
Frame = +1 / +2
Query: 466 VTTPAQLVRLQRSPFSITSRNLLG*GSRSLTCRTPTGP**VILSQP*ATRNLSTWRLG*T 645
+ TP LV+ QRS S TSRNL *G+R CRTPTG ** I P*AT S+WR G T
Sbjct: 326 LVTPPALVQSQRSMPSTTSRNLQS*GNR*PPCRTPTGL**AIPWLP*ATET*SSWREGWT 505
Query: 646 KLSERLEQKRTMCCVLKSSTCREGK 720
K ERLEQ+R LK STCREG+
Sbjct: 506 KA*ERLEQERMNY*ALKLSTCREGE 580
Score = 54.2 bits (112), Expect(3) = 6e-045
Identities = 20/24 (83%), Positives = 22/24 (91%)
Frame = +2 / +3
Query: 272 AHREHDQQAGHLLQAPQRPPQEGV 343
AHREHD+ AGHLLQAPQR P+EGV
Sbjct: 135 AHREHDEPAGHLLQAPQRTPEEGV 206
Score = 24.0 bits (46), Expect(3) = 1e-063
Identities = 9/15 (60%), Positives = 11/15 (73%)
Frame = +1 / +1
Query: 709 REGKWSCRMTTCT*G 753
R G +CR+TT T*G
Sbjct: 571 RRGNGACRITTST*G 615
Score = 22.6 bits (43), Expect(3) = 6e-045
Identities = 7/19 (36%), Positives = 13/19 (68%)
Frame = +3 / +3
Query: 702 YMQRREMELQNDNLYLRSR 758
+ ++ + LQN+N YLR +
Sbjct: 564 HAEKGKWSLQNNNFYLRGK 620
>gb|BI948062.1|BI948062 HVSMEl0008A23f Hordeum vulgare spike EST library HVcDNA0012
(Fusarium infected) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEl0008A23f, mRNA sequence
Length = 825
Score = 156 bits (336), Expect(3) = 3e-063
Identities = 66/78 (84%), Positives = 71/78 (91%)
Frame = +3 / +2
Query: 249 GKGKTEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANNS 428
G+G+ EIKRI NRQVTFC+RRNGLLKKAYELSVLCDAEVAL+VFSSRGRLYEY+NNS
Sbjct: 116 GRGRIEIKRIGGAGNRQVTFCERRNGLLKKAYELSVLCDAEVALVVFSSRGRLYEYSNNS 295
Query: 429 VKGTIERYKKATSDNSSA 482
VK TIERYKKATSD SSA
Sbjct: 296 VKATIERYKKATSDTSSA 349
Score = 142 bits (305), Expect(3) = 1e-044
Identities = 57/88 (64%), Positives = 74/88 (84%)
Frame = +3 / +2
Query: 456 KATSDNSSAAGTIAEVTIQHYKQESARLRQQIVNLQNSNRALIGDSITTMSHKELKHLET 635
K + ++S+AGT+AE+ QHY+QESA+LRQQI LQNSNR LIGD++ TMSH++LK LE
Sbjct: 320 KKATSDTSSAGTVAEINAQHYQQESAKLRQQITTLQNSNRTLIGDTMATMSHRDLKQLEG 499
Query: 636 RLDKALGKIRAKKNDVLCSEVEYMQRRE 719
RLDK LGKIRA+KN++L +E+EYMQR E
Sbjct: 500 RLDKGLGKIRARKNELLSAEIEYMQRGE 583
Score = 101 bits (215), Expect(3) = 8e-023
Identities = 51/89 (57%), Positives = 59/89 (66%)
Frame = -3 / -3
Query: 719 FPSLHVLDFRTQHIVLFCSNLSESFV*PSLQVLKFLVAHGCDRITYQGPVGVLQVNDLLP 540
FPSLHVL+F +L CSNLS +FV PSLQ+L VAHG I Y PVGVLQ LLP
Sbjct: 583 FPSLHVLNFSA**FILSCSNLS*AFVQPSLQLL*VSVAHGSHGIAY*SPVGVLQGGYLLP 404
Query: 539 QPSRFLLVMLNGDLCNRTSCAGVVTGCLL 453
Q RFLLV+L DLC+ TS GV + L+
Sbjct: 403 QLCRFLLVVLGIDLCDCTSAGGVTSCLLV 317
Score = 93.2 bits (197), Expect(3) = 2e-042
Identities = 45/74 (60%), Positives = 47/74 (63%)
Frame = -1 / -1
Query: 481 ALELSLVAFLYLSMVPFTLLLAYS*RRPRLEKXXXXXXXXXXXXXXXAFLRRPLRRLQKV 302
ALE+SLVAFLYLSMV TLLL YS*RRPRLEK AF R PLRR QKV
Sbjct: 348 ALEVSLVAFLYLSMVALTLLLEYS*RRPRLEKTTSATSASQSTESSYAFFRSPLRRSQKV 169
Query: 301 TCLLVVFSMRLISV 260
TC MRLIS+
Sbjct: 168 TCRFPAPPMRLISI 127
Score = 90.0 bits (190), Expect(3) = 2e-042
Identities = 39/57 (68%), Positives = 42/57 (73%)
Frame = -1 / -1
Query: 718 SLLCMYSTSEHSTSFFFALIFPRALSNLVSKCLSSLWLMVVIESPIRALLEFCKLTI 548
S LCMYS S S SFF ALIFPR LS+L S C SLWLMV + SPIR LLEFCK+ I
Sbjct: 582 SPLCMYSISALSNSFFLALIFPRPLSSLPSSCFRSLWLMVAMVSPIRVLLEFCKVVI 412
Score = 89.5 bits (189), Expect(3) = 3e-063
Identities = 49/89 (55%), Positives = 56/89 (62%)
Frame = +1 / +3
Query: 466 VTTPAQLVRLQRSPFSITSRNLLG*GSRSLTCRTPTGP**VILSQP*ATRNLSTWRLG*T 645
+ TP LV+ QRS S TSRNL *G+R CRTPTG ** I P*AT S+WR G T
Sbjct: 330 LVTPPALVQSQRSMPSTTSRNLQS*GNR*PPCRTPTGL**AIPWLP*ATET*SSWREGWT 509
Query: 646 KLSERLEQKRTMCCVLKSSTCREGKWSCR 732
K ERLEQ+R LK STCREG + +
Sbjct: 510 KA*ERLEQERMNY*ALKLSTCREGNGAAK 596
Score = 41.4 bits (84), Expect(3) = 1e-044
Identities = 16/24 (66%), Positives = 19/24 (79%)
Frame = +2 / +1
Query: 272 AHREHDQQAGHLLQAPQRPPQEGV 343
AHR + AGHLL+APQR P+EGV
Sbjct: 139 AHRGGGEPAGHLLRAPQRTPEEGV 210
Score = 35.4 bits (71), Expect(3) = 1e-044
Identities = 14/21 (66%), Positives = 16/21 (76%)
Frame = +3 / +1
Query: 714 REMELQNDNLYLRSRVDENER 776
R MELQN+N YLR +V E ER
Sbjct: 577 RGMELQNNNFYLREKVPETER 639
Score = 35.4 bits (71), Expect(3) = 3e-063
Identities = 12/23 (52%), Positives = 18/23 (78%)
Frame = +1 / +2
Query: 709 REGKWSCRMTTCT*GAGLMRMKG 777
+ G+WSC++TT T*G +R+KG
Sbjct: 572 QRGEWSCKITTST*GKKSLRLKG 640
Score = 29.0 bits (57), Expect(3) = 2e-042
Identities = 14/25 (56%), Positives = 16/25 (64%)
Frame = -3 / -1
Query: 788 CLLCPFILINPAP*VQVVILQLHFP 714
C PF L + P V+VVILQLH P
Sbjct: 651 CCRPPFSLRDFFPQVEVVILQLHSP 577
Score = 24.9 bits (48), Expect(3) = 8e-023
Identities = 13/33 (39%), Positives = 14/33 (42%)
Frame = -2 / -3
Query: 813 SMVPPSCSLSVVPFHSHQPGSLSTSCHSATPFP 715
S PP PF S S SC+ A PFP
Sbjct: 676 SRPPPVKRXLSPPFQSQGLFPSSRSCYFAAPFP 578
Score = 24.4 bits (47), Expect(3) = 8e-023
Identities = 8/16 (50%), Positives = 10/16 (62%)
Frame = -3 / -3
Query: 125 CGWCSLLFSDVHALVP 78
CGWCS L + +VP
Sbjct: 49 CGWCSQLLVEYLHVVP 2
>gb|BG344090.1|BG344090 HVSMEg0007K02f Hordeum vulgare pre-anthesis spike EST library
HVcDNA0008 (white to yellow anther) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEg0007K02f, mRNA sequence
Length = 832
Score = 163 bits (350), Expect(4) = 2e-062
Identities = 69/73 (94%), Positives = 71/73 (97%)
Frame = +3 / +3
Query: 264 EIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANNSVKGTI 443
EIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVAL+VFSSRGRLYEY+NNSVK TI
Sbjct: 6 EIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALVVFSSRGRLYEYSNNSVKATI 185
Query: 444 ERYKKATSDNSSA 482
ERYKKATSD SSA
Sbjct: 186 ERYKKATSDTSSA 224
Score = 115 bits (245), Expect(3) = 2e-042
Identities = 46/73 (63%), Positives = 60/73 (82%)
Frame = +3 / +3
Query: 456 KATSDNSSAAGTIAEVTIQHYKQESARLRQQIVNLQNSNRALIGDSITTMSHKELKHLET 635
K + ++S+AGT+AE+ QHY+QESA+LRQQI LQNSNR LIGD++ TMSH++LK LE
Sbjct: 195 KKATSDTSSAGTVAEINAQHYQQESAKLRQQITTLQNSNRTLIGDTMATMSHRDLKQLEG 374
Query: 636 RLDKALGKIRAKK 674
+LD LGKIRA+K
Sbjct: 375 KLDXGLGKIRARK 413
Score = 107 bits (228), Expect(4) = 1e-043
Identities = 50/74 (67%), Positives = 52/74 (70%)
Frame = -1 / -1
Query: 481 ALELSLVAFLYLSMVPFTLLLAYS*RRPRLEKXXXXXXXXXXXXXXXAFLRRPLRRLQKV 302
ALE+SLVAFLYLSMV TLLL YS*RRPRLEK AF R PLRRLQKV
Sbjct: 223 ALEVSLVAFLYLSMVALTLLLEYS*RRPRLEKTTSATSASQSTESSYAFFRSPLRRLQKV 44
Query: 301 TCLLVVFSMRLISV 260
TC VVFSMRLIS+
Sbjct: 43 TCRFVVFSMRLISI 2
Score = 68.9 bits (144), Expect(4) = 2e-062
Identities = 39/70 (55%), Positives = 44/70 (62%)
Frame = +1 / +1
Query: 466 VTTPAQLVRLQRSPFSITSRNLLG*GSRSLTCRTPTGP**VILSQP*ATRNLSTWRLG*T 645
+ TP LV+ QRS S TSRNL *G+R CRTPTG ** I P*AT S+WR T
Sbjct: 205 LVTPPALVQSQRSMPSTTSRNLQS*GNR*PPCRTPTGL**AIPWLP*ATET*SSWRESWT 384
Query: 646 KLSERLEQKR 675
ERLEQ+R
Sbjct: 385 XA*ERLEQER 414
Score = 68.0 bits (142), Expect(4) = 1e-043
Identities = 28/44 (63%), Positives = 31/44 (70%)
Frame = -1 / -1
Query: 679 SFFFALIFPRALSNLVSKCLSSLWLMVVIESPIRALLEFCKLTI 548
S F ALIFPR S+ S C SLWLMV + SPIR LLEFCK+ I
Sbjct: 418 SIFLALIFPRPXSSFPSSCFRSLWLMVAMVSPIRVLLEFCKVVI 287
Score = 54.2 bits (112), Expect(3) = 2e-042
Identities = 20/24 (83%), Positives = 22/24 (91%)
Frame = +2 / +2
Query: 272 AHREHDQQAGHLLQAPQRPPQEGV 343
AHREHD+ AGHLLQAPQR P+EGV
Sbjct: 14 AHREHDEPAGHLLQAPQRTPEEGV 85
Score = 42.8 bits (87), Expect(3) = 2e-042
Identities = 17/24 (70%), Positives = 19/24 (79%)
Frame = +3 / +1
Query: 714 REMELQNDNLYLRSRVDENERAQQ 785
REMELQN+N YLR +V E ER QQ
Sbjct: 451 REMELQNNNFYLREKVAETERGQQ 522
Score = 42.8 bits (87), Expect(4) = 2e-062
Identities = 16/28 (57%), Positives = 21/28 (75%)
Frame = +1 / +2
Query: 709 REGKWSCRMTTCT*GAGLMRMKGHNRQR 792
+ GKWSCR+TT T*G +R+KG N +R
Sbjct: 446 QRGKWSCRITTST*GKKSLRLKGGNSRR 529
Score = 36.3 bits (73), Expect(4) = 1e-043
Identities = 18/30 (60%), Positives = 20/30 (66%)
Frame = -3 / -2
Query: 803 PHHVRCLLCPFILINPAP*VQVVILQLHFP 714
P R LL PF L + P V+VVILQLHFP
Sbjct: 540 PSCQRLLLPPFSLSDFFPQVEVVILQLHFP 451
Score = 22.1 bits (42), Expect(4) = 2e-062
Identities = 11/26 (42%), Positives = 13/26 (50%)
Frame = +3 / +3
Query: 777 AQQTANMMGAPSTSEYQQHGFTPYDP 854
A +MMGA STS Q +DP
Sbjct: 516 ATADVDMMGAASTSIGVQPNMIQWDP 593
Score = 22.1 bits (42), Expect(4) = 1e-043
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = -3 / -1
Query: 719 FPSLHVLDF 693
FPSLHVL F
Sbjct: 457 FPSLHVLKF 431
>gb|BU995356.1|BU995356 HM09P23r HM Hordeum vulgare subsp. vulgare cDNA clone HM09P23
5-PRIME, mRNA sequence
Length = 628
Score = 165 bits (354), Expect(3) = 3e-062
Identities = 68/78 (87%), Positives = 74/78 (94%)
Frame = +3 / +1
Query: 249 GKGKTEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANNS 428
G+G+ EIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVAL+VFSSRGRLYEY+NNS
Sbjct: 148 GRGRIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALVVFSSRGRLYEYSNNS 327
Query: 429 VKGTIERYKKATSDNSSA 482
VK TIERYKKA SD S++
Sbjct: 328 VKATIERYKKANSDTSNS 381
Score = 109 bits (233), Expect(3) = 1e-039
Identities = 50/73 (68%), Positives = 54/73 (73%)
Frame = -1 / -3
Query: 478 LELSLVAFLYLSMVPFTLLLAYS*RRPRLEKXXXXXXXXXXXXXXXAFLRRPLRRLQKVT 299
L++SL+AFLYLSMV FTLL YS*RRPRLEK AFLRRPLRRLQKVT
Sbjct: 377 LDVSLLAFLYLSMVAFTLLFEYS*RRPRLEKTTRATSASQSTESSYAFLRRPLRRLQKVT 198
Query: 298 CLLVVFSMRLISV 260
C LVVFSMRLIS+
Sbjct: 197 CRLVVFSMRLISI 159
Score = 79.0 bits (166), Expect(3) = 3e-062
Identities = 30/55 (54%), Positives = 48/55 (87%)
Frame = +3 / +1
Query: 564 NSNRALIGDSITTMSHKELKHLETRLDKALGKIRAKKNDVLCSEVEYMQRREMEL 728
+++R+L+ DS++TM+ ++LK LE RL+K + KIRA+KN+++ +EVEYMQ+REMEL
Sbjct: 463 SNSRSLVRDSVSTMTLRDLKQLEGRLEKGIAKIRARKNELMYAEVEYMQKREMEL 627
Score = 57.9 bits (120), Expect(3) = 1e-039
Identities = 28/53 (52%), Positives = 35/53 (66%)
Frame = -1 / -3
Query: 727 NSISLLCMYSTSEHSTSFFFALIFPRALSNLVSKCLSSLWLMVVIESPIRALL 569
+SISL C+YSTS + +SFF ALI S+L S CL SL +MV+ ES LL
Sbjct: 626 SSISLFCIYSTSAYISSFFLALILAMPFSSLPSSCLRSLRVMVLTESLTSDLL 468
Score = 57.4 bits (119), Expect(4) = 2e-028
Identities = 22/24 (91%), Positives = 22/24 (91%)
Frame = +2 / +3
Query: 272 AHREHDQQAGHLLQAPQRPPQEGV 343
AHREH Q AGHLLQAPQRPPQEGV
Sbjct: 171 AHREHHQPAGHLLQAPQRPPQEGV 242
Score = 55.6 bits (115), Expect(4) = 2e-028
Identities = 22/39 (56%), Positives = 32/39 (82%)
Frame = +3 / +1
Query: 456 KATSDNSSAAGTIAEVTIQHYKQESARLRQQIVNLQNSN 572
K + ++S +GT+AEV Q+Y+QES++LRQQI +LQNSN
Sbjct: 352 KKANSDTSNSGTVAEVNAQYYQQESSKLRQQISSLQNSN 468
Score = 40.0 bits (81), Expect(4) = 2e-028
Identities = 22/46 (47%), Positives = 26/46 (56%)
Frame = +1 / +2
Query: 589 ILSQP*ATRNLSTWRLG*TKLSERLEQKRTMCCVLKSSTCREGKWS 726
ILS P* LS+ + G K R E +R C+LK S CR GKWS
Sbjct: 488 ILSAP*P*GILSSLKAGWRKA*PR*ELERMS*CMLKLSICRRGKWS 625
Score = 35.0 bits (70), Expect(3) = 1e-039
Identities = 17/35 (48%), Positives = 18/35 (51%)
Frame = -3 / -2
Query: 566 VLQVNDLLPQPSRFLLVMLNGDLCNRTSCAGVVTG 462
VLQ DLL Q LLV+L D CNR V G
Sbjct: 462 VLQATDLLAQLGGLLLVVLGIDFCNRARVGCVTVG 358
Score = 34.5 bits (69), Expect(3) = 3e-062
Identities = 17/38 (44%), Positives = 22/38 (57%)
Frame = +1 / +2
Query: 460 QPVTTPAQLVRLQRSPFSITSRNLLG*GSRSLTCRTPT 573
+P T L RLQ+S S TSR+ SRS+ C+T T
Sbjct: 356 RPTVTHPTLARLQKSMPSTTSRSPPSCASRSVACKTQT 469
Score = 28.6 bits (56), Expect(4) = 2e-028
Identities = 11/16 (68%), Positives = 13/16 (81%)
Frame = +2 / +3
Query: 431 EGHH*EVQEGNQ*QLQ 478
E HH*EVQ+G Q* +Q
Sbjct: 330 ESHH*EVQKGQQ*HIQ 377
>gb|BE454527.3|BE454527 HVSMEh0094C05f Hordeum vulgare 5-45 DAP spike EST library
HVcDNA0009 (5 to 45 DAP) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEh0094C05f, mRNA sequence
Length = 916
Score = 170 bits (365), Expect(2) = 7e-059
Identities = 71/78 (91%), Positives = 75/78 (96%)
Frame = +3 / +1
Query: 249 GKGKTEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANNS 428
G+G+ EIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVAL+VFSSRGRLYEY+NNS
Sbjct: 94 GRGRIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALVVFSSRGRLYEYSNNS 273
Query: 429 VKGTIERYKKATSDNSSA 482
VK TIERYKKATSD SSA
Sbjct: 274 VKATIERYKKATSDTSSA 327
Score = 128 bits (274), Expect(2) = 4e-039
Identities = 52/86 (60%), Positives = 68/86 (79%)
Frame = +3 / +1
Query: 456 KATSDNSSAAGTIAEVTIQHYKQESARLRQQIVNLQNSNRALIGDSITTMSHKELKHLET 635
K + ++S+AGT+AE+ QHY+QESA+LRQQI LQNSNR LIGD++ TMSH++L LE
Sbjct: 298 KKATSDTSSAGTVAEINAQHYQQESAKLRQQITTLQNSNRTLIGDTMATMSHRDLXQLEG 477
Query: 636 RLDKALGKIRAKKNDVLCSEVEYMQR 713
RLD L KI A KN++L +E+EYMQR
Sbjct: 478 RLDXGLXKIXAXKNELLSAEIEYMQR 555
Score = 107 bits (228), Expect(2) = 1e-040
Identities = 50/74 (67%), Positives = 52/74 (70%)
Frame = -1 / -3
Query: 481 ALELSLVAFLYLSMVPFTLLLAYS*RRPRLEKXXXXXXXXXXXXXXXAFLRRPLRRLQKV 302
ALE+SLVAFLYLSMV TLLL YS*RRPRLEK AF R PLRRLQKV
Sbjct: 326 ALEVSLVAFLYLSMVALTLLLEYS*RRPRLEKTTSATSASQSTESSYAFFRSPLRRLQKV 147
Query: 301 TCLLVVFSMRLISV 260
TC VVFSMRLIS+
Sbjct: 146 TCRFVVFSMRLISI 105
Score = 80.3 bits (169), Expect(2) = 1e-040
Identities = 36/62 (58%), Positives = 39/62 (62%)
Frame = -1 / -3
Query: 733 FCNSISLLCMYSTSEHSTSFFFALIFPRALSNLVSKCLSSLWLMVVIESPIRALLEFCKL 554
F LCMYS S S SFF A IF R S+L S C SLWLMV + SPIR LLEFCK+
Sbjct: 575 FAAPFPXLCMYSISALSNSFFXAXIFXRPXSSLPSSCXRSLWLMVAMVSPIRVLLEFCKV 396
Query: 553 TI 548
I
Sbjct: 395 VI 390
Score = 78.5 bits (165), Expect(2) = 7e-059
Identities = 44/83 (53%), Positives = 49/83 (59%)
Frame = +1 / +2
Query: 466 VTTPAQLVRLQRSPFSITSRNLLG*GSRSLTCRTPTGP**VILSQP*ATRNLSTWRLG*T 645
+ TP LV+ QRS S TSRNL *G+R CRTPTG ** I P*AT S+WR G T
Sbjct: 308 LVTPPALVQSQRSMPSTTSRNLQS*GNR*PPCRTPTGL**AIPWLP*ATETXSSWREGWT 487
Query: 646 KLSERLEQKRTMCCVLKSSTCRE 714
RL +R LK STCRE
Sbjct: 488 XAXXRLXXERMNY*ALKLSTCRE 556
Score = 54.2 bits (112), Expect(2) = 4e-039
Identities = 20/24 (83%), Positives = 22/24 (91%)
Frame = +2 / +3
Query: 272 AHREHDQQAGHLLQAPQRPPQEGV 343
AHREHD+ AGHLLQAPQR P+EGV
Sbjct: 117 AHREHDEPAGHLLQAPQRTPEEGV 188
>gb|AL507763.1|AL507763 AL507763 Hordeum vulgare Barke developing caryopsis (3.-15.DAP)
Hordeum vulgare subsp. vulgare cDNA clone HY06M13V 5',
mRNA sequence
Length = 700
Score = 170 bits (365), Expect(4) = 8e-059
Identities = 71/78 (91%), Positives = 75/78 (96%)
Frame = +3 / +1
Query: 249 GKGKTEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANNS 428
G+G+ EIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVAL+VFSSRGRLYEY+NNS
Sbjct: 211 GRGRIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALVVFSSRGRLYEYSNNS 390
Query: 429 VKGTIERYKKATSDNSSA 482
VK TIERYKKATSD SSA
Sbjct: 391 VKATIERYKKATSDTSSA 444
Score = 107 bits (228), Expect(4) = 2e-038
Identities = 50/74 (67%), Positives = 52/74 (70%)
Frame = -1 / -3
Query: 481 ALELSLVAFLYLSMVPFTLLLAYS*RRPRLEKXXXXXXXXXXXXXXXAFLRRPLRRLQKV 302
ALE+SLVAFLYLSMV TLLL YS*RRPRLEK AF R PLRRLQKV
Sbjct: 443 ALEVSLVAFLYLSMVALTLLLEYS*RRPRLEKTTSATSASQSTESSYAFFRSPLRRLQKV 264
Query: 301 TCLLVVFSMRLISV 260
TC VVFSMRLIS+
Sbjct: 263 TCRFVVFSMRLISI 222
Score = 95.9 bits (203), Expect(2) = 2e-029
Identities = 40/73 (54%), Positives = 55/73 (75%)
Frame = +3 / +1
Query: 456 KATSDNSSAAGTIAEVTIQHYKQESARLRQQIVNLQNSNRALIGDSITTMSHKELKHLET 635
K + ++S+AGT+AE+ QHY+QESA+LRQQI LQNSNR LIGD++ TMSH++LK LE
Sbjct: 415 KKATSDTSSAGTVAEINAQHYQQESAKLRQQITTLQNSNRTLIGDTMATMSHRDLKQLEG 594
Query: 636 RLDKALGKIRAKK 674
+ + K +KK
Sbjct: 595 KAGQRPRKD*SKK 633
Score = 58.8 bits (122), Expect(4) = 8e-059
Identities = 32/56 (57%), Positives = 36/56 (64%)
Frame = +1 / +2
Query: 466 VTTPAQLVRLQRSPFSITSRNLLG*GSRSLTCRTPTGP**VILSQP*ATRNLSTWR 633
+ TP LV+ QRS S TSRNL *G+R CRTPTG ** I P*AT S+WR
Sbjct: 425 LVTPPALVQSQRSMPSTTSRNLQS*GNR*PPCRTPTGL**AIPWLP*ATET*SSWR 592
Score = 54.2 bits (112), Expect(2) = 2e-029
Identities = 20/24 (83%), Positives = 22/24 (91%)
Frame = +2 / +3
Query: 272 AHREHDQQAGHLLQAPQRPPQEGV 343
AHREHD+ AGHLLQAPQR P+EGV
Sbjct: 234 AHREHDEPAGHLLQAPQRTPEEGV 305
Score = 49.2 bits (101), Expect(4) = 2e-038
Identities = 19/28 (67%), Positives = 21/28 (75%)
Frame = -1 / -3
Query: 631 SKCLSSLWLMVVIESPIRALLEFCKLTI 548
S C SLWLMV + SPIR LLEFCK+ I
Sbjct: 590 SSCFRSLWLMVAMVSPIRVLLEFCKVVI 507
Score = 34.1 bits (68), Expect(4) = 8e-059
Identities = 13/17 (76%), Positives = 16/17 (94%)
Frame = +3 / +2
Query: 636 RLDKALGKIRAKKNDVL 686
RLDK LGKIRA+KN++L
Sbjct: 596 RLDKGLGKIRARKNELL 646
Score = 31.3 bits (62), Expect(4) = 2e-038
Identities = 13/17 (76%), Positives = 14/17 (82%)
Frame = -1 / -2
Query: 685 STSFFFALIFPRALSNL 635
S SFF ALIFPR LS+L
Sbjct: 645 SNSFFLALIFPRPLSSL 595
Score = 28.1 bits (55), Expect(4) = 2e-038
Identities = 10/18 (55%), Positives = 13/18 (72%)
Frame = -2 / -2
Query: 720 FPFSACTRLQNTAHRSFL 667
FPFSACT+ Q ++ FL
Sbjct: 681 FPFSACTQFQRLSNSFFL 628
Score = 22.1 bits (42), Expect(4) = 8e-059
Identities = 8/10 (80%), Positives = 9/10 (90%)
Frame = +1 / +1
Query: 691 LKSSTCREGK 720
LK STCREG+
Sbjct: 652 LKLSTCREGE 681
>gb|BQ660301.1|BQ660301 HI01N16w HI Hordeum vulgare subsp. vulgare cDNA clone HI01N16
3-PRIME, mRNA sequence
Length = 679
Score = 181 bits (389), Expect(3) = 1e-058
Identities = 73/110 (66%), Positives = 92/110 (83%)
Frame = +3 / -3
Query: 456 KATSDNSSAAGTIAEVTIQHYKQESARLRQQIVNLQNSNRALIGDSITTMSHKELKHLET 635
K + ++S+AGT+AE+ QHY+QESA+LRQQI LQNSNR LIGD++ TMSH++LK LE
Sbjct: 644 KKATSDTSSAGTVAEINAQHYQQESAKLRQQITTLQNSNRTLIGDTMATMSHRDLKQLEG 465
Query: 636 RLDKALGKIRAKKNDVLCSEVEYMQRREMELQNDNLYLRSRVDENERAQQ 785
RLDK LGKIRA+KN++L +E+EYMQRREMELQN+N YLR +V E ER QQ
Sbjct: 464 RLDKGLGKIRARKNELLSAEIEYMQRREMELQNNNFYLREKVAETERGQQ 315
Score = 129 bits (277), Expect(3) = 6e-035
Identities = 67/116 (57%), Positives = 77/116 (66%)
Frame = -3 / +3
Query: 800 HHVRCLLCPFILINPAP*VQVVILQLHFPSLHVLDFRTQHIVLFCSNLSESFV*PSLQVL 621
H R LL PF L + P V+VVILQLHFPSLHVL+F +L CSNLS +FV PSLQ+L
Sbjct: 300 HVQRLLLPPFSLSDFFPQVEVVILQLHFPSLHVLNFSA**FILSCSNLS*AFVQPSLQLL 479
Query: 620 KFLVAHGCDRITYQGPVGVLQVNDLLPQPSRFLLVMLNGDLCNRTSCAGVVTGCLL 453
VAHG I Y PVGVLQ LLPQ RFLLV+L DLC+ TS GV + L+
Sbjct: 480 *VSVAHGSHGIAY*SPVGVLQGGYLLPQLCRFLLVVLGIDLCDCTSAGGVTSCLLV 647
Score = 125 bits (268), Expect(3) = 1e-041
Identities = 64/109 (58%), Positives = 73/109 (66%)
Frame = +1 / -1
Query: 466 VTTPAQLVRLQRSPFSITSRNLLG*GSRSLTCRTPTGP**VILSQP*ATRNLSTWRLG*T 645
+ TP LV+ QRS S TSRNL *G+R CRTPTG ** I P*AT S+WR G T
Sbjct: 634 LVTPPALVQSQRSMPSTTSRNLQS*GNR*PPCRTPTGL**AIPWLP*ATET*SSWREGWT 455
Query: 646 KLSERLEQKRTMCCVLKSSTCREGKWSCRMTTCT*GAGLMRMKGHNRQR 792
K ERLEQ+R LK STCREGKWSCR+TT T*G +R+KG N +R
Sbjct: 454 KA*ERLEQERMNY*ALKLSTCREGKWSCRITTST*GKKSLRLKGGNSRR 308
Score = 122 bits (262), Expect(3) = 4e-040
Identities = 54/79 (68%), Positives = 59/79 (74%)
Frame = -1 / +1
Query: 784 CCALSFSSTRLLKYKLSFCNSISLLCMYSTSEHSTSFFFALIFPRALSNLVSKCLSSLWL 605
CC LS S+T LK KL FC+SISLLCMYS S S SFF ALIFPR LS+L S C SLWL
Sbjct: 316 CCPLSVSATFSLK*KLLFCSSISLLCMYSISALSNSFFLALIFPRPLSSLPSSCFRSLWL 495
Query: 604 MVVIESPIRALLEFCKLTI 548
MV + SPIR LLEFCK+ I
Sbjct: 496 MVAMVSPIRVLLEFCKVVI 552
Score = 88.6 bits (187), Expect(2) = 2e-022
Identities = 46/107 (42%), Positives = 54/107 (50%)
Frame = -2 / +2
Query: 804 PPSCSLSVVPFHSHQPGSLSTSCHSATPFPFSACTRLQNTAHRSFLL*SFRELCLT*SPS 625
P + +V PF S + S SC+SA PFPFSACT+ Q SFLL*SF LC P+
Sbjct: 296 PSCSTSAVAPFQSQRLFPSSRSCYSAAPFPFSACTQFQRLVIHSFLL*SFLGLCPAFPPA 475
Query: 624 A*VPCGSWL**NHLSGPCWXXXXXXXXXXX*QIPACNAEW*PLQSYQ 484
A CGSW L CW QIPA +A * L+ YQ
Sbjct: 476 ALGLCGSW*PWYRLLESCWSSARWLSVASALQIPAGSAGH*SLRLYQ 616
Score = 54.7 bits (113), Expect(3) = 1e-058
Identities = 20/25 (80%), Positives = 24/25 (96%)
Frame = +3 / -3
Query: 858 RSFLQFNIVQQPQFYSQQEDRKDFN 932
R+FLQFNI+QQPQ+Y+QQEDRK FN
Sbjct: 242 RTFLQFNIMQQPQYYTQQEDRKTFN 168
Score = 45.1 bits (92), Expect(3) = 1e-041
Identities = 19/21 (90%), Positives = 19/21 (90%)
Frame = +3 / -3
Query: 420 NNSVKGTIERYKKATSDNSSA 482
NNSVK TIERYKKATSD SSA
Sbjct: 677 NNSVKATIERYKKATSDTSSA 615
Score = 41.4 bits (84), Expect(3) = 4e-040
Identities = 18/25 (72%), Positives = 19/25 (76%)
Frame = -1 / +1
Query: 931 LKSFRSSC*E*N*GCCTMLNCRKLL 857
LK F SSC * *GCC MLNCRK+L
Sbjct: 169 LKVFLSSCWV*Y*GCCMMLNCRKVL 243
Score = 39.6 bits (80), Expect(3) = 4e-040
Identities = 18/21 (85%), Positives = 19/21 (90%)
Frame = -1 / +1
Query: 481 ALELSLVAFLYLSMVPFTLLL 419
ALE+SLVAFLYLSMV TLLL
Sbjct: 616 ALEVSLVAFLYLSMVALTLLL 678
Score = 38.6 bits (78), Expect(3) = 1e-041
Identities = 17/26 (65%), Positives = 20/26 (76%)
Frame = +2 / -2
Query: 854 NKELPAVQHRAAASVLFSAGGPERLQ 931
++ LPAVQH AAASVL AGG + LQ
Sbjct: 246 SENLPAVQHHAAASVLHPAGG*KNLQ 169
Score = 38.2 bits (77), Expect(2) = 2e-022
Identities = 12/16 (75%), Positives = 12/16 (75%)
Frame = -2 / +2
Query: 480 RWSCHWLPSCTSQWCP 433
RW CH LPSC SQW P
Sbjct: 617 RWRCH*LPSCISQWLP 664
Score = 30.4 bits (60), Expect(3) = 1e-058
Identities = 13/25 (52%), Positives = 14/25 (56%)
Frame = +3 / -3
Query: 780 QQTANMMGAPSTSEYQQHGFTPYDP 854
QQT NMMGA STS + DP
Sbjct: 317 QQTLNMMGAASTSNEYEQNMIQCDP 243
Score = 28.6 bits (56), Expect(3) = 6e-035
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = -1 / +1
Query: 886 CTMLNCRKLLIGS*GVKPCC*YSLVDGAPIMFAVCC 779
C M+ + ++GS + C V+ APIMF VCC
Sbjct: 211 CCMMLNCRKVLGSHCIIFCSYSLDVEAAPIMFNVCC 318
Score = 28.1 bits (55), Expect(3) = 6e-035
Identities = 13/17 (76%), Positives = 13/17 (76%)
Frame = -2 / +2
Query: 915 PPAENRTEAAARC*TAG 865
PPA TEAAA C*TAG
Sbjct: 185 PPAGCSTEAAA*C*TAG 235
>gb|CA025584.1|CA025584 HZ52J05r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ52J05
5-PRIME, mRNA sequence
Length = 574
Score = 170 bits (365), Expect(2) = 1e-057
Identities = 71/78 (91%), Positives = 75/78 (96%)
Frame = +3 / +1
Query: 249 GKGKTEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANNS 428
G+G+ EIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVAL+VFSSRGRLYEY+NNS
Sbjct: 127 GRGRIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALVVFSSRGRLYEYSNNS 306
Query: 429 VKGTIERYKKATSDNSSA 482
VK TIERYKKATSD SSA
Sbjct: 307 VKATIERYKKATSDTSSA 360
Score = 128 bits (275), Expect(2) = 3e-039
Identities = 51/81 (62%), Positives = 68/81 (83%)
Frame = +3 / +1
Query: 456 KATSDNSSAAGTIAEVTIQHYKQESARLRQQIVNLQNSNRALIGDSITTMSHKELKHLET 635
K + ++S+AGT+AE+ QHY+QESA+LRQQI LQNSNR LIGD++ TMSH++LK LE
Sbjct: 331 KKATSDTSSAGTVAEINAQHYQQESAKLRQQITTLQNSNRTLIGDTMATMSHRDLKQLEG 510
Query: 636 RLDKALGKIRAKKNDVLCSEV 698
RLDK LGKIRA+KN++L +E+
Sbjct: 511 RLDKGLGKIRARKNELLSAEI 573
Score = 107 bits (228), Expect(2) = 1e-039
Identities = 50/74 (67%), Positives = 52/74 (70%)
Frame = -1 / -3
Query: 481 ALELSLVAFLYLSMVPFTLLLAYS*RRPRLEKXXXXXXXXXXXXXXXAFLRRPLRRLQKV 302
ALE+SLVAFLYLSMV TLLL YS*RRPRLEK AF R PLRRLQKV
Sbjct: 359 ALEVSLVAFLYLSMVALTLLLEYS*RRPRLEKTTSATSASQSTESSYAFFRSPLRRLQKV 180
Query: 301 TCLLVVFSMRLISV 260
TC VVFSMRLIS+
Sbjct: 179 TCRFVVFSMRLISI 138
Score = 76.7 bits (161), Expect(2) = 1e-039
Identities = 32/46 (69%), Positives = 35/46 (76%)
Frame = -1 / -3
Query: 685 STSFFFALIFPRALSNLVSKCLSSLWLMVVIESPIRALLEFCKLTI 548
S SFF ALIFPR LS+L S C SLWLMV + SPIR LLEFCK+ I
Sbjct: 560 SNSFFLALIFPRPLSSLPSSCFRSLWLMVAMVSPIRVLLEFCKVVI 423
Score = 74.4 bits (156), Expect(2) = 1e-057
Identities = 41/70 (58%), Positives = 46/70 (65%)
Frame = +1 / +2
Query: 466 VTTPAQLVRLQRSPFSITSRNLLG*GSRSLTCRTPTGP**VILSQP*ATRNLSTWRLG*T 645
+ TP LV+ QRS S TSRNL *G+R CRTPTG ** I P*AT S+WR G T
Sbjct: 341 LVTPPALVQSQRSMPSTTSRNLQS*GNR*PPCRTPTGL**AIPWLP*ATET*SSWREGWT 520
Query: 646 KLSERLEQKR 675
K ERLEQ+R
Sbjct: 521 KA*ERLEQER 550
Score = 54.2 bits (112), Expect(2) = 3e-039
Identities = 20/24 (83%), Positives = 22/24 (91%)
Frame = +2 / +3
Query: 272 AHREHDQQAGHLLQAPQRPPQEGV 343
AHREHD+ AGHLLQAPQR P+EGV
Sbjct: 150 AHREHDEPAGHLLQAPQRTPEEGV 221
>gb|BU973813.1|BU973813 HB26A20r BC Hordeum vulgare subsp. vulgare cDNA clone HB26A20
5-PRIME, mRNA sequence
Length = 554
Score = 170 bits (365), Expect(2) = 1e-057
Identities = 71/78 (91%), Positives = 75/78 (96%)
Frame = +3 / +2
Query: 249 GKGKTEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANNS 428
G+G+ EIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVAL+VFSSRGRLYEY+NNS
Sbjct: 128 GRGRIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALVVFSSRGRLYEYSNNS 307
Query: 429 VKGTIERYKKATSDNSSA 482
VK TIERYKKATSD SSA
Sbjct: 308 VKATIERYKKATSDTSSA 361
Score = 122 bits (260), Expect(2) = 3e-037
Identities = 49/74 (66%), Positives = 62/74 (83%)
Frame = +3 / +2
Query: 456 KATSDNSSAAGTIAEVTIQHYKQESARLRQQIVNLQNSNRALIGDSITTMSHKELKHLET 635
K + ++S+AGT+AE+ QHY+QESA+LRQQI LQNSNR LIGD++ TMSH++LK LE
Sbjct: 332 KKATSDTSSAGTVAEINAQHYQQESAKLRQQITTLQNSNRTLIGDTMATMSHRDLKQLEG 511
Query: 636 RLDKALGKIRAKKN 677
RLDK LGKIRA+KN
Sbjct: 512 RLDKGLGKIRARKN 553
Score = 107 bits (228), Expect(2) = 2e-038
Identities = 50/74 (67%), Positives = 52/74 (70%)
Frame = -1 / -3
Query: 481 ALELSLVAFLYLSMVPFTLLLAYS*RRPRLEKXXXXXXXXXXXXXXXAFLRRPLRRLQKV 302
ALE+SLVAFLYLSMV TLLL YS*RRPRLEK AF R PLRRLQKV
Sbjct: 360 ALEVSLVAFLYLSMVALTLLLEYS*RRPRLEKTTSATSASQSTESSYAFFRSPLRRLQKV 181
Query: 301 TCLLVVFSMRLISV 260
TC VVFSMRLIS+
Sbjct: 180 TCRFVVFSMRLISI 139
Score = 74.4 bits (156), Expect(2) = 1e-057
Identities = 41/70 (58%), Positives = 46/70 (65%)
Frame = +1 / +3
Query: 466 VTTPAQLVRLQRSPFSITSRNLLG*GSRSLTCRTPTGP**VILSQP*ATRNLSTWRLG*T 645
+ TP LV+ QRS S TSRNL *G+R CRTPTG ** I P*AT S+WR G T
Sbjct: 342 LVTPPALVQSQRSMPSTTSRNLQS*GNR*PPCRTPTGL**AIPWLP*ATET*SSWREGWT 521
Query: 646 KLSERLEQKR 675
K ERLEQ+R
Sbjct: 522 KA*ERLEQER 551
Score = 73.0 bits (153), Expect(2) = 2e-038
Identities = 30/43 (69%), Positives = 33/43 (76%)
Frame = -1 / -3
Query: 676 FFFALIFPRALSNLVSKCLSSLWLMVVIESPIRALLEFCKLTI 548
FF ALIFPR LS+L S C SLWLMV + SPIR LLEFCK+ I
Sbjct: 552 FFLALIFPRPLSSLPSSCFRSLWLMVAMVSPIRVLLEFCKVVI 424
Score = 54.2 bits (112), Expect(2) = 3e-037
Identities = 20/24 (83%), Positives = 22/24 (91%)
Frame = +2 / +1
Query: 272 AHREHDQQAGHLLQAPQRPPQEGV 343
AHREHD+ AGHLLQAPQR P+EGV
Sbjct: 151 AHREHDEPAGHLLQAPQRTPEEGV 222
>gb|CA025405.1|CA025405 HZ52B05r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ52B05
5-PRIME, mRNA sequence
Length = 553
Score = 170 bits (365), Expect(2) = 1e-057
Identities = 71/78 (91%), Positives = 75/78 (96%)
Frame = +3 / +2
Query: 249 GKGKTEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANNS 428
G+G+ EIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVAL+VFSSRGRLYEY+NNS
Sbjct: 107 GRGRIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALVVFSSRGRLYEYSNNS 286
Query: 429 VKGTIERYKKATSDNSSA 482
VK TIERYKKATSD SSA
Sbjct: 287 VKATIERYKKATSDTSSA 340
Score = 128 bits (275), Expect(2) = 3e-039
Identities = 51/81 (62%), Positives = 68/81 (83%)
Frame = +3 / +2
Query: 456 KATSDNSSAAGTIAEVTIQHYKQESARLRQQIVNLQNSNRALIGDSITTMSHKELKHLET 635
K + ++S+AGT+AE+ QHY+QESA+LRQQI LQNSNR LIGD++ TMSH++LK LE
Sbjct: 311 KKATSDTSSAGTVAEINAQHYQQESAKLRQQITTLQNSNRTLIGDTMATMSHRDLKQLEG 490
Query: 636 RLDKALGKIRAKKNDVLCSEV 698
RLDK LGKIRA+KN++L +E+
Sbjct: 491 RLDKGLGKIRARKNELLSAEI 553
Score = 107 bits (228), Expect(3) = 1e-039
Identities = 50/74 (67%), Positives = 52/74 (70%)
Frame = -1 / -2
Query: 481 ALELSLVAFLYLSMVPFTLLLAYS*RRPRLEKXXXXXXXXXXXXXXXAFLRRPLRRLQKV 302
ALE+SLVAFLYLSMV TLLL YS*RRPRLEK AF R PLRRLQKV
Sbjct: 339 ALEVSLVAFLYLSMVALTLLLEYS*RRPRLEKTTSATSASQSTESSYAFFRSPLRRLQKV 160
Query: 301 TCLLVVFSMRLISV 260
TC VVFSMRLIS+
Sbjct: 159 TCRFVVFSMRLISI 118
Score = 76.7 bits (161), Expect(3) = 1e-039
Identities = 32/46 (69%), Positives = 35/46 (76%)
Frame = -1 / -2
Query: 685 STSFFFALIFPRALSNLVSKCLSSLWLMVVIESPIRALLEFCKLTI 548
S SFF ALIFPR LS+L S C SLWLMV + SPIR LLEFCK+ I
Sbjct: 540 SNSFFLALIFPRPLSSLPSSCFRSLWLMVAMVSPIRVLLEFCKVVI 403
Score = 74.4 bits (156), Expect(2) = 1e-057
Identities = 41/70 (58%), Positives = 46/70 (65%)
Frame = +1 / +3
Query: 466 VTTPAQLVRLQRSPFSITSRNLLG*GSRSLTCRTPTGP**VILSQP*ATRNLSTWRLG*T 645
+ TP LV+ QRS S TSRNL *G+R CRTPTG ** I P*AT S+WR G T
Sbjct: 321 LVTPPALVQSQRSMPSTTSRNLQS*GNR*PPCRTPTGL**AIPWLP*ATET*SSWREGWT 500
Query: 646 KLSERLEQKR 675
K ERLEQ+R
Sbjct: 501 KA*ERLEQER 530
Score = 54.2 bits (112), Expect(2) = 3e-039
Identities = 20/24 (83%), Positives = 22/24 (91%)
Frame = +2 / +1
Query: 272 AHREHDQQAGHLLQAPQRPPQEGV 343
AHREHD+ AGHLLQAPQR P+EGV
Sbjct: 130 AHREHDEPAGHLLQAPQRTPEEGV 201
Score = 22.6 bits (43), Expect(3) = 1e-039
Identities = 7/13 (53%), Positives = 8/13 (61%)
Frame = -3 / -1
Query: 125 CGWCSLLFSDVHA 87
CGWCS L + A
Sbjct: 40 CGWCSQLLVEPRA 2
>gb|CA025534.1|CA025534 HZ52G24r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ52G24
5-PRIME, mRNA sequence
Length = 542
Score = 170 bits (365), Expect(2) = 1e-057
Identities = 71/78 (91%), Positives = 75/78 (96%)
Frame = +3 / +2
Query: 249 GKGKTEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANNS 428
G+G+ EIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVAL+VFSSRGRLYEY+NNS
Sbjct: 95 GRGRIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALVVFSSRGRLYEYSNNS 274
Query: 429 VKGTIERYKKATSDNSSA 482
VK TIERYKKATSD SSA
Sbjct: 275 VKATIERYKKATSDTSSA 328
Score = 128 bits (275), Expect(2) = 3e-039
Identities = 51/81 (62%), Positives = 68/81 (83%)
Frame = +3 / +2
Query: 456 KATSDNSSAAGTIAEVTIQHYKQESARLRQQIVNLQNSNRALIGDSITTMSHKELKHLET 635
K + ++S+AGT+AE+ QHY+QESA+LRQQI LQNSNR LIGD++ TMSH++LK LE
Sbjct: 299 KKATSDTSSAGTVAEINAQHYQQESAKLRQQITTLQNSNRTLIGDTMATMSHRDLKQLEG 478
Query: 636 RLDKALGKIRAKKNDVLCSEV 698
RLDK LGKIRA+KN++L +E+
Sbjct: 479 RLDKGLGKIRARKNELLSAEI 541
Score = 107 bits (228), Expect(2) = 1e-039
Identities = 50/74 (67%), Positives = 52/74 (70%)
Frame = -1 / -3
Query: 481 ALELSLVAFLYLSMVPFTLLLAYS*RRPRLEKXXXXXXXXXXXXXXXAFLRRPLRRLQKV 302
ALE+SLVAFLYLSMV TLLL YS*RRPRLEK AF R PLRRLQKV
Sbjct: 327 ALEVSLVAFLYLSMVALTLLLEYS*RRPRLEKTTSATSASQSTESSYAFFRSPLRRLQKV 148
Query: 301 TCLLVVFSMRLISV 260
TC VVFSMRLIS+
Sbjct: 147 TCRFVVFSMRLISI 106
Score = 76.7 bits (161), Expect(2) = 1e-039
Identities = 32/46 (69%), Positives = 35/46 (76%)
Frame = -1 / -3
Query: 685 STSFFFALIFPRALSNLVSKCLSSLWLMVVIESPIRALLEFCKLTI 548
S SFF ALIFPR LS+L S C SLWLMV + SPIR LLEFCK+ I
Sbjct: 528 SNSFFLALIFPRPLSSLPSSCFRSLWLMVAMVSPIRVLLEFCKVVI 391
Score = 74.4 bits (156), Expect(2) = 1e-057
Identities = 41/70 (58%), Positives = 46/70 (65%)
Frame = +1 / +3
Query: 466 VTTPAQLVRLQRSPFSITSRNLLG*GSRSLTCRTPTGP**VILSQP*ATRNLSTWRLG*T 645
+ TP LV+ QRS S TSRNL *G+R CRTPTG ** I P*AT S+WR G T
Sbjct: 309 LVTPPALVQSQRSMPSTTSRNLQS*GNR*PPCRTPTGL**AIPWLP*ATET*SSWREGWT 488
Query: 646 KLSERLEQKR 675
K ERLEQ+R
Sbjct: 489 KA*ERLEQER 518
Score = 54.2 bits (112), Expect(2) = 3e-039
Identities = 20/24 (83%), Positives = 22/24 (91%)
Frame = +2 / +1
Query: 272 AHREHDQQAGHLLQAPQRPPQEGV 343
AHREHD+ AGHLLQAPQR P+EGV
Sbjct: 118 AHREHDEPAGHLLQAPQRTPEEGV 189
>gb|AL508019.1|AL508019 AL508019 Hordeum vulgare Barke developing caryopsis (3.-15.DAP)
Hordeum vulgare subsp. vulgare cDNA clone HY07I15V 5',
mRNA sequence
Length = 700
Score = 170 bits (365), Expect(2) = 2e-057
Identities = 71/78 (91%), Positives = 75/78 (96%)
Frame = +3 / +1
Query: 249 GKGKTEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANNS 428
G+G+ EIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVAL+VFSSRGRLYEY+NNS
Sbjct: 139 GRGRIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALVVFSSRGRLYEYSNNS 318
Query: 429 VKGTIERYKKATSDNSSA 482
VK TIERYKKATSD SSA
Sbjct: 319 VKATIERYKKATSDTSSA 372
Score = 120 bits (257), Expect(2) = 8e-037
Identities = 49/73 (67%), Positives = 61/73 (83%)
Frame = +3 / +1
Query: 456 KATSDNSSAAGTIAEVTIQHYKQESARLRQQIVNLQNSNRALIGDSITTMSHKELKHLET 635
K + ++S+AGT+AE+ QHY+QESA+LRQQI LQNSNR LIGD++ TMSH++LK LE
Sbjct: 343 KKATSDTSSAGTVAEINAQHYQQESAKLRQQITTLQNSNRTLIGDTMATMSHRDLKQLEG 522
Query: 636 RLDKALGKIRAKK 674
RLDK LGKIRAKK
Sbjct: 523 RLDKGLGKIRAKK 561
Score = 107 bits (228), Expect(2) = 2e-038
Identities = 50/74 (67%), Positives = 52/74 (70%)
Frame = -1 / -3
Query: 481 ALELSLVAFLYLSMVPFTLLLAYS*RRPRLEKXXXXXXXXXXXXXXXAFLRRPLRRLQKV 302
ALE+SLVAFLYLSMV TLLL YS*RRPRLEK AF R PLRRLQKV
Sbjct: 371 ALEVSLVAFLYLSMVALTLLLEYS*RRPRLEKTTSATSASQSTESSYAFFRSPLRRLQKV 192
Query: 301 TCLLVVFSMRLISV 260
TC VVFSMRLIS+
Sbjct: 191 TCRFVVFSMRLISI 150
Score = 73.5 bits (154), Expect(2) = 2e-057
Identities = 40/70 (57%), Positives = 46/70 (65%)
Frame = +1 / +2
Query: 466 VTTPAQLVRLQRSPFSITSRNLLG*GSRSLTCRTPTGP**VILSQP*ATRNLSTWRLG*T 645
+ TP LV+ QRS S TSRNL *G+R CRTPTG ** I P*AT S+WR G T
Sbjct: 353 LVTPPALVQSQRSMPSTTSRNLQS*GNR*PPCRTPTGL**AIPWLP*ATET*SSWREGWT 532
Query: 646 KLSERLEQKR 675
K ERLEQ++
Sbjct: 533 KA*ERLEQRK 562
Score = 73.0 bits (153), Expect(2) = 2e-038
Identities = 30/42 (71%), Positives = 33/42 (78%)
Frame = -1 / -3
Query: 673 FFALIFPRALSNLVSKCLSSLWLMVVIESPIRALLEFCKLTI 548
FFALIFPR LS+L S C SLWLMV + SPIR LLEFCK+ I
Sbjct: 560 FFALIFPRPLSSLPSSCFRSLWLMVAMVSPIRVLLEFCKVVI 435
Score = 54.2 bits (112), Expect(2) = 8e-037
Identities = 20/24 (83%), Positives = 22/24 (91%)
Frame = +2 / +3
Query: 272 AHREHDQQAGHLLQAPQRPPQEGV 343
AHREHD+ AGHLLQAPQR P+EGV
Sbjct: 162 AHREHDEPAGHLLQAPQRTPEEGV 233
>gb|BF258470.2|BF258470 HVSMEf0015M23f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEf0015M23f, mRNA sequence
Length = 891
Score = 149 bits (320), Expect(2) = 3e-056
Identities = 62/77 (80%), Positives = 70/77 (90%)
Frame = +3 / +3
Query: 249 GKGKTEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANNS 428
G+GK EIKRIENTTNR+VTFC R NGLLKKAYELSVLCDAEVALI FSSRGRLYEY+NN+
Sbjct: 201 GRGKIEIKRIENTTNRKVTFC*RMNGLLKKAYELSVLCDAEVALIDFSSRGRLYEYSNNN 380
Query: 429 VKGTIERYKKATSDNSS 479
++ TI+RYKKA SD S+
Sbjct: 381 IRSTIDRYKKACSDTSN 431
Score = 90.4 bits (191), Expect(2) = 3e-056
Identities = 37/85 (43%), Positives = 61/85 (71%)
Frame = +3 / +3
Query: 456 KATSDNSSAAGTIAEVTIQHYKQESARLRQQIVNLQNSNRALIGDSITTMSHKELKHLET 635
K ++S T E+ +Y+QESA+L QQI LQNSNR L+GDS+++++ KELKH++
Sbjct: 405 KKACSDTSNTNTATEINAHYYQQESAKLIQQIQMLQNSNRHLMGDSLSSLTVKELKHVDN 584
Query: 636 RLDKALGKIRAKKNDVLCSEVEYMQ 710
+L++ + +IR+KK+ +L +E+E Q
Sbjct: 585 KLERGITRIRSKKHYMLLAEIEPCQ 659
>gb|BU979781.1|BU979781 HA17E15r HA Hordeum vulgare subsp. vulgare cDNA clone HA17E15
5-PRIME, mRNA sequence
Length = 514
Score = 181 bits (389), Expect = 1e-044
Identities = 73/110 (66%), Positives = 92/110 (83%)
Frame = +3 / +3
Query: 456 KATSDNSSAAGTIAEVTIQHYKQESARLRQQIVNLQNSNRALIGDSITTMSHKELKHLET 635
K + ++S+AGT+AE+ QHY+QESA+LRQQI LQNSNR LIGD++ TMSH++LK LE
Sbjct: 126 KKATSDTSSAGTVAEINAQHYQQESAKLRQQITTLQNSNRTLIGDTMATMSHRDLKQLEG 305
Query: 636 RLDKALGKIRAKKNDVLCSEVEYMQRREMELQNDNLYLRSRVDENERAQQ 785
RLDK LGKIRA+KN++L +E+EYMQRREMELQN+N YLR +V E ER QQ
Sbjct: 306 RLDKGLGKIRARKNELLSAEIEYMQRREMELQNNNFYLREKVAETERGQQ 455
Score = 129 bits (277), Expect = 3e-029
Identities = 67/116 (57%), Positives = 77/116 (66%)
Frame = -3 / -3
Query: 800 HHVRCLLCPFILINPAP*VQVVILQLHFPSLHVLDFRTQHIVLFCSNLSESFV*PSLQVL 621
H R LL PF L + P V+VVILQLHFPSLHVL+F +L CSNLS +FV PSLQ+L
Sbjct: 470 HVQRLLLPPFSLSDFFPQVEVVILQLHFPSLHVLNFSA**FILSCSNLS*AFVQPSLQLL 291
Query: 620 KFLVAHGCDRITYQGPVGVLQVNDLLPQPSRFLLVMLNGDLCNRTSCAGVVTGCLL 453
VAHG I Y PVGVLQ LLPQ RFLLV+L DLC+ TS GV + L+
Sbjct: 290 *VSVAHGSHGIAY*SPVGVLQGGYLLPQLCRFLLVVLGIDLCDCTSAGGVTSCLLV 123
Score = 125 bits (268), Expect(3) = 1e-055
Identities = 64/109 (58%), Positives = 73/109 (66%)
Frame = +1 / +1
Query: 466 VTTPAQLVRLQRSPFSITSRNLLG*GSRSLTCRTPTGP**VILSQP*ATRNLSTWRLG*T 645
+ TP LV+ QRS S TSRNL *G+R CRTPTG ** I P*AT S+WR G T
Sbjct: 136 LVTPPALVQSQRSMPSTTSRNLQS*GNR*PPCRTPTGL**AIPWLP*ATET*SSWREGWT 315
Query: 646 KLSERLEQKRTMCCVLKSSTCREGKWSCRMTTCT*GAGLMRMKGHNRQR 792
K ERLEQ+R LK STCREGKWSCR+TT T*G +R+KG N +R
Sbjct: 316 KA*ERLEQERMNY*ALKLSTCREGKWSCRITTST*GKKSLRLKGGNSRR 462
Score = 122 bits (262), Expect(3) = 4e-042
Identities = 54/79 (68%), Positives = 59/79 (74%)
Frame = -1 / -1
Query: 784 CCALSFSSTRLLKYKLSFCNSISLLCMYSTSEHSTSFFFALIFPRALSNLVSKCLSSLWL 605
CC LS S+T LK KL FC+SISLLCMYS S S SFF ALIFPR LS+L S C SLWL
Sbjct: 454 CCPLSVSATFSLK*KLLFCSSISLLCMYSISALSNSFFLALIFPRPLSSLPSSCFRSLWL 275
Query: 604 MVVIESPIRALLEFCKLTI 548
MV + SPIR LLEFCK+ I
Sbjct: 274 MVAMVSPIRVLLEFCKVVI 218
Score = 104 bits (221), Expect(3) = 1e-055
Identities = 44/48 (91%), Positives = 46/48 (95%)
Frame = +3 / +3
Query: 339 AYELSVLCDAEVALIVFSSRGRLYEYANNSVKGTIERYKKATSDNSSA 482
AYELSVLCDAEVAL+VFSSRGRLYEY+NNSVK TIERYKKATSD SSA
Sbjct: 12 AYELSVLCDAEVALVVFSSRGRLYEYSNNSVKATIERYKKATSDTSSA 155
Score = 88.6 bits (187), Expect(2) = 2e-022
Identities = 46/107 (42%), Positives = 54/107 (50%)
Frame = -2 / -2
Query: 804 PPSCSLSVVPFHSHQPGSLSTSCHSATPFPFSACTRLQNTAHRSFLL*SFRELCLT*SPS 625
P + +V PF S + S SC+SA PFPFSACT+ Q SFLL*SF LC P+
Sbjct: 474 PSCSTSAVAPFQSQRLFPSSRSCYSAAPFPFSACTQFQRLVIHSFLL*SFLGLCPAFPPA 295
Query: 624 A*VPCGSWL**NHLSGPCWXXXXXXXXXXX*QIPACNAEW*PLQSYQ 484
A CGSW L CW QIPA +A * L+ YQ
Sbjct: 294 ALGLCGSW*PWYRLLESCWSSARWLSVASALQIPAGSAGH*SLRLYQ 154
Score = 61.1 bits (127), Expect(3) = 4e-042
Identities = 28/32 (87%), Positives = 29/32 (90%)
Frame = -1 / -1
Query: 481 ALELSLVAFLYLSMVPFTLLLAYS*RRPRLEK 386
ALE+SLVAFLYLSMV TLLL YS*RRPRLEK
Sbjct: 154 ALEVSLVAFLYLSMVALTLLLEYS*RRPRLEK 59
Score = 38.2 bits (77), Expect(2) = 2e-022
Identities = 12/16 (75%), Positives = 12/16 (75%)
Frame = -2 / -2
Query: 480 RWSCHWLPSCTSQWCP 433
RW CH LPSC SQW P
Sbjct: 153 RWRCH*LPSCISQWLP 106
Score = 26.7 bits (52), Expect(3) = 1e-055
Identities = 11/13 (84%), Positives = 11/13 (84%)
Frame = +3 / +3
Query: 780 QQTANMMGAPSTS 818
QQT NMMGA STS
Sbjct: 453 QQTLNMMGAASTS 491
Score = 26.7 bits (52), Expect(3) = 4e-042
Identities = 9/12 (75%), Positives = 10/12 (83%)
Frame = -1 / -1
Query: 814 VDGAPIMFAVCC 779
V+ APIMF VCC
Sbjct: 487 VEAAPIMFNVCC 452
>gb|BQ462735.1|BQ462735 HI01N16T HI Hordeum vulgare subsp. vulgare cDNA clone HI01N16
5-PRIME, mRNA sequence
Length = 547
Score = 170 bits (365), Expect(2) = 3e-054
Identities = 71/78 (91%), Positives = 75/78 (96%)
Frame = +3 / +1
Query: 249 GKGKTEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANNS 428
G+G+ EIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVAL+VFSSRGRLYEY+NNS
Sbjct: 148 GRGRIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALVVFSSRGRLYEYSNNS 327
Query: 429 VKGTIERYKKATSDNSSA 482
VK TIERYKKATSD SSA
Sbjct: 328 VKATIERYKKATSDTSSA 381
Score = 107 bits (228), Expect(2) = 7e-033
Identities = 50/74 (67%), Positives = 52/74 (70%)
Frame = -1 / -3
Query: 481 ALELSLVAFLYLSMVPFTLLLAYS*RRPRLEKXXXXXXXXXXXXXXXAFLRRPLRRLQKV 302
ALE+SLVAFLYLSMV TLLL YS*RRPRLEK AF R PLRRLQKV
Sbjct: 380 ALEVSLVAFLYLSMVALTLLLEYS*RRPRLEKTTSATSASQSTESSYAFFRSPLRRLQKV 201
Query: 301 TCLLVVFSMRLISV 260
TC VVFSMRLIS+
Sbjct: 200 TCRFVVFSMRLISI 159
Score = 103 bits (219), Expect(2) = 1e-031
Identities = 41/64 (64%), Positives = 53/64 (82%)
Frame = +3 / +1
Query: 456 KATSDNSSAAGTIAEVTIQHYKQESARLRQQIVNLQNSNRALIGDSITTMSHKELKHLET 635
K + ++S+AGT+AE+ QHY+QESA+LRQQI LQNSNR LIGD++ TMSH++LK LE
Sbjct: 352 KKATSDTSSAGTVAEINAQHYQQESAKLRQQITTLQNSNRTLIGDTMATMSHRDLKQLEG 531
Query: 636 RLDK 647
RLDK
Sbjct: 532 RLDK 543
Score = 62.9 bits (131), Expect(2) = 3e-054
Identities = 35/61 (57%), Positives = 39/61 (63%)
Frame = +1 / +2
Query: 466 VTTPAQLVRLQRSPFSITSRNLLG*GSRSLTCRTPTGP**VILSQP*ATRNLSTWRLG*T 645
+ TP LV+ QRS S TSRNL *G+R CRTPTG ** I P*AT S+WR G T
Sbjct: 362 LVTPPALVQSQRSMPSTTSRNLQS*GNR*PPCRTPTGL**AIPWLP*ATET*SSWREGWT 541
Query: 646 K 648
K
Sbjct: 542 K 544
Score = 54.2 bits (112), Expect(2) = 1e-031
Identities = 20/24 (83%), Positives = 22/24 (91%)
Frame = +2 / +3
Query: 272 AHREHDQQAGHLLQAPQRPPQEGV 343
AHREHD+ AGHLLQAPQR P+EGV
Sbjct: 171 AHREHDEPAGHLLQAPQRTPEEGV 242
Score = 54.2 bits (112), Expect(2) = 7e-033
Identities = 22/33 (66%), Positives = 25/33 (75%)
Frame = -1 / -3
Query: 646 LSNLVSKCLSSLWLMVVIESPIRALLEFCKLTI 548
LS+L S C SLWLMV + SPIR LLEFCK+ I
Sbjct: 542 LSSLPSSCFRSLWLMVAMVSPIRVLLEFCKVVI 444
>gb|CA028663.1|CA028663 HZ62N08r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ62N08
5-PRIME, mRNA sequence
Length = 546
Score = 170 bits (365), Expect(2) = 3e-054
Identities = 71/78 (91%), Positives = 75/78 (96%)
Frame = +3 / +1
Query: 249 GKGKTEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANNS 428
G+G+ EIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVAL+VFSSRGRLYEY+NNS
Sbjct: 148 GRGRIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALVVFSSRGRLYEYSNNS 327
Query: 429 VKGTIERYKKATSDNSSA 482
VK TIERYKKATSD SSA
Sbjct: 328 VKATIERYKKATSDTSSA 381
Score = 107 bits (228), Expect(2) = 7e-033
Identities = 50/74 (67%), Positives = 52/74 (70%)
Frame = -1 / -2
Query: 481 ALELSLVAFLYLSMVPFTLLLAYS*RRPRLEKXXXXXXXXXXXXXXXAFLRRPLRRLQKV 302
ALE+SLVAFLYLSMV TLLL YS*RRPRLEK AF R PLRRLQKV
Sbjct: 380 ALEVSLVAFLYLSMVALTLLLEYS*RRPRLEKTTSATSASQSTESSYAFFRSPLRRLQKV 201
Query: 301 TCLLVVFSMRLISV 260
TC VVFSMRLIS+
Sbjct: 200 TCRFVVFSMRLISI 159
Score = 103 bits (219), Expect(2) = 1e-031
Identities = 41/64 (64%), Positives = 53/64 (82%)
Frame = +3 / +1
Query: 456 KATSDNSSAAGTIAEVTIQHYKQESARLRQQIVNLQNSNRALIGDSITTMSHKELKHLET 635
K + ++S+AGT+AE+ QHY+QESA+LRQQI LQNSNR LIGD++ TMSH++LK LE
Sbjct: 352 KKATSDTSSAGTVAEINAQHYQQESAKLRQQITTLQNSNRTLIGDTMATMSHRDLKQLEG 531
Query: 636 RLDK 647
RLDK
Sbjct: 532 RLDK 543
Score = 62.9 bits (131), Expect(2) = 3e-054
Identities = 35/61 (57%), Positives = 39/61 (63%)
Frame = +1 / +2
Query: 466 VTTPAQLVRLQRSPFSITSRNLLG*GSRSLTCRTPTGP**VILSQP*ATRNLSTWRLG*T 645
+ TP LV+ QRS S TSRNL *G+R CRTPTG ** I P*AT S+WR G T
Sbjct: 362 LVTPPALVQSQRSMPSTTSRNLQS*GNR*PPCRTPTGL**AIPWLP*ATET*SSWREGWT 541
Query: 646 K 648
K
Sbjct: 542 K 544
Score = 54.2 bits (112), Expect(2) = 1e-031
Identities = 20/24 (83%), Positives = 22/24 (91%)
Frame = +2 / +3
Query: 272 AHREHDQQAGHLLQAPQRPPQEGV 343
AHREHD+ AGHLLQAPQR P+EGV
Sbjct: 171 AHREHDEPAGHLLQAPQRTPEEGV 242
Score = 54.2 bits (112), Expect(2) = 7e-033
Identities = 22/33 (66%), Positives = 25/33 (75%)
Frame = -1 / -2
Query: 646 LSNLVSKCLSSLWLMVVIESPIRALLEFCKLTI 548
LS+L S C SLWLMV + SPIR LLEFCK+ I
Sbjct: 542 LSSLPSSCFRSLWLMVAMVSPIRVLLEFCKVVI 444
>gb|BG417142.1|BG417142 HVSMEk0016H10f Hordeum vulgare testa/pericarp EST library
HVcDNA0013 (normal) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEk0016H10f, mRNA sequence
Length = 471
Score = 157 bits (338), Expect(2) = 6e-050
Identities = 66/78 (84%), Positives = 71/78 (91%)
Frame = +3 / +1
Query: 249 GKGKTEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANNS 428
G+G+ +IKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVAL+VFSSRGRLYEY+NNS
Sbjct: 70 GRGRIDIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALVVFSSRGRLYEYSNNS 249
Query: 429 VKGTIERYKKATSDNSSA 482
TIERYKK TSD SA
Sbjct: 250 G*ATIERYKKGTSDTXSA 303
Score = 97.7 bits (207), Expect(2) = 5e-030
Identities = 39/66 (59%), Positives = 52/66 (78%)
Frame = +3 / +1
Query: 456 KATSDNSSAAGTIAEVTIQHYKQESARLRQQIVNLQNSNRALIGDSITTMSHKELKHLET 635
K + ++ +AG++AE+ QHY+QESA+LR QI LQNSNR LIGD++ TMSH++LK LE
Sbjct: 274 KKGTSDTXSAGSVAEINAQHYQQESAKLRPQITTLQNSNRTLIGDTMATMSHRDLKQLEG 453
Query: 636 RLDKAL 653
RLDK L
Sbjct: 454 RLDKGL 471
Score = 97.7 bits (207), Expect(2) = 1e-030
Identities = 47/74 (63%), Positives = 49/74 (66%)
Frame = -1 / -2
Query: 481 ALELSLVAFLYLSMVPFTLLLAYS*RRPRLEKXXXXXXXXXXXXXXXAFLRRPLRRLQKV 302
AL +SLV FLYLSMV LLL YS*RRPRLEK AF R PLRRLQKV
Sbjct: 302 ALXVSLVPFLYLSMVA*PLLLEYS*RRPRLEKTTSATSASQSTESSYAFFRSPLRRLQKV 123
Query: 301 TCLLVVFSMRLISV 260
TC VVFSMRLIS+
Sbjct: 122 TCRFVVFSMRLISI 81
Score = 61.1 bits (127), Expect(2) = 6e-050
Identities = 34/61 (55%), Positives = 38/61 (62%)
Frame = +1 / +2
Query: 466 VTTPAQLVRLQRSPFSITSRNLLG*GSRSLTCRTPTGP**VILSQP*ATRNLSTWRLG*T 645
+ TP LV+ QRS S TSRNL *G R CRTPTG ** I P*AT ++WR G T
Sbjct: 284 LVTPXALVQSQRSMPSTTSRNLQS*GHR*PPCRTPTGL**AIPWLP*ATET*NSWREGWT 463
Query: 646 K 648
K
Sbjct: 464 K 466
Score = 56.1 bits (116), Expect(2) = 1e-030
Identities = 23/35 (65%), Positives = 26/35 (74%)
Frame = -1 / -2
Query: 652 RALSNLVSKCLSSLWLMVVIESPIRALLEFCKLTI 548
R LS+L S C SLWLMV + SPIR LLEFCK+ I
Sbjct: 470 RPLSSLPSSCFRSLWLMVAMVSPIRVLLEFCKVVI 366
Score = 54.2 bits (112), Expect(2) = 5e-030
Identities = 20/24 (83%), Positives = 22/24 (91%)
Frame = +2 / +3
Query: 272 AHREHDQQAGHLLQAPQRPPQEGV 343
AHREHD+ AGHLLQAPQR P+EGV
Sbjct: 93 AHREHDEPAGHLLQAPQRTPEEGV 164
>gb|CA028005.1|CA028005 HZ60L09r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ60L09
5-PRIME, mRNA sequence
Length = 479
Score = 170 bits (365), Expect(2) = 2e-049
Identities = 71/78 (91%), Positives = 75/78 (96%)
Frame = +3 / +1
Query: 249 GKGKTEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANNS 428
G+G+ EIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVAL+VFSSRGRLYEY+NNS
Sbjct: 136 GRGRIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALVVFSSRGRLYEYSNNS 315
Query: 429 VKGTIERYKKATSDNSSA 482
VK TIERYKKATSD SSA
Sbjct: 316 VKATIERYKKATSDTSSA 369
Score = 107 bits (228), Expect(3) = 1e-025
Identities = 50/74 (67%), Positives = 52/74 (70%)
Frame = -1 / -1
Query: 481 ALELSLVAFLYLSMVPFTLLLAYS*RRPRLEKXXXXXXXXXXXXXXXAFLRRPLRRLQKV 302
ALE+SLVAFLYLSMV TLLL YS*RRPRLEK AF R PLRRLQKV
Sbjct: 368 ALEVSLVAFLYLSMVALTLLLEYS*RRPRLEKTTSATSASQSTESSYAFFRSPLRRLQKV 189
Query: 301 TCLLVVFSMRLISV 260
TC VVFSMRLIS+
Sbjct: 188 TCRFVVFSMRLISI 147
Score = 74.4 bits (156), Expect(2) = 4e-023
Identities = 29/46 (63%), Positives = 38/46 (82%)
Frame = +3 / +1
Query: 456 KATSDNSSAAGTIAEVTIQHYKQESARLRQQIVNLQNSNRALIGDS 593
K + ++S+AGT+AE+ QHY+QESA+LRQQI LQNSNR LIGD+
Sbjct: 340 KKATSDTSSAGTVAEINAQHYQQESAKLRQQITTLQNSNRTLIGDT 477
Score = 54.2 bits (112), Expect(2) = 4e-023
Identities = 20/24 (83%), Positives = 22/24 (91%)
Frame = +2 / +3
Query: 272 AHREHDQQAGHLLQAPQRPPQEGV 343
AHREHD+ AGHLLQAPQR P+EGV
Sbjct: 159 AHREHDEPAGHLLQAPQRTPEEGV 230
Score = 46.9 bits (96), Expect(2) = 2e-049
Identities = 25/42 (59%), Positives = 28/42 (66%)
Frame = +1 / +2
Query: 466 VTTPAQLVRLQRSPFSITSRNLLG*GSRSLTCRTPTGP**VI 591
+ TP LV+ QRS S TSRNL *G+R CRTPTG ** I
Sbjct: 350 LVTPPALVQSQRSMPSTTSRNLQS*GNR*PPCRTPTGL**AI 475
Score = 29.5 bits (58), Expect(3) = 1e-025
Identities = 11/14 (78%), Positives = 12/14 (85%)
Frame = -1 / -1
Query: 589 SPIRALLEFCKLTI 548
SPIR LLEFCK+ I
Sbjct: 473 SPIRVLLEFCKVVI 432
Score = 21.7 bits (41), Expect(3) = 1e-025
Identities = 6/7 (85%), Positives = 6/7 (85%)
Frame = -3 / -3
Query: 125 CGWCSLL 105
CGWCS L
Sbjct: 69 CGWCSQL 49
>gb|BG417111.1|BG417111 HVSMEk0016F04f Hordeum vulgare testa/pericarp EST library
HVcDNA0013 (normal) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEk0016F04f, mRNA sequence
Length = 477
Score = 189 bits (407), Expect = 3e-047
Identities = 80/123 (65%), Positives = 105/123 (85%)
Frame = +3 / +3
Query: 249 GKGKTEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANNS 428
G+G+ EIKRIENTT+RQVTFCKR+NGLLKKAYELSVLC+AE+ALIVFS+RGRLYEYA+NS
Sbjct: 108 GRGRIEIKRIENTTSRQVTFCKRKNGLLKKAYELSVLCEAEIALIVFSARGRLYEYASNS 287
Query: 429 VKGTIERYKKATSDNSSAAGTIAEVTIQHYKQESARLRQQIVNLQNSNRALIGDSITTMS 608
K TI+RYKKA++ + +A I + Q++ QESA+LRQQI++LQN+NR L+G+ + ++
Sbjct: 288 TKTTIDRYKKASASSFGSAPAIDVNSQQYF*QESAKLRQQILSLQNANRHLMGEFVGHLT 467
Query: 609 HKE 617
KE
Sbjct: 468 VKE 476
>gb|BU998535.1|BU998535 HI11F23r HI Hordeum vulgare subsp. vulgare cDNA clone HI11F23
5-PRIME, mRNA sequence
Length = 580
Score = 165 bits (354), Expect(2) = 1e-046
Identities = 68/78 (87%), Positives = 74/78 (94%)
Frame = +3 / +2
Query: 249 GKGKTEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANNS 428
G+G+ EIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVAL+VFSSRGRLYEY+NNS
Sbjct: 212 GRGRIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALVVFSSRGRLYEYSNNS 391
Query: 429 VKGTIERYKKATSDNSSA 482
VK TIERYKKA SD S++
Sbjct: 392 VKATIERYKKANSDTSNS 445
Score = 109 bits (233), Expect(2) = 3e-033
Identities = 50/73 (68%), Positives = 54/73 (73%)
Frame = -1 / -2
Query: 478 LELSLVAFLYLSMVPFTLLLAYS*RRPRLEKXXXXXXXXXXXXXXXAFLRRPLRRLQKVT 299
L++SL+AFLYLSMV FTLL YS*RRPRLEK AFLRRPLRRLQKVT
Sbjct: 441 LDVSLLAFLYLSMVAFTLLFEYS*RRPRLEKTTRATSASQSTESSYAFLRRPLRRLQKVT 262
Query: 298 CLLVVFSMRLISV 260
C LVVFSMRLIS+
Sbjct: 261 CRLVVFSMRLISI 223
Score = 74.4 bits (156), Expect(2) = 5e-024
Identities = 29/55 (52%), Positives = 46/55 (83%)
Frame = +3 / +2
Query: 456 KATSDNSSAAGTIAEVTIQHYKQESARLRQQIVNLQNSNRALIGDSITTMSHKEL 620
K + ++S +GT+AEV Q+Y+QES++LRQQI +LQNSNR+L+ DS++TM+ ++L
Sbjct: 416 KKANSDTSNSGTVAEVNAQYYQQESSKLRQQISSLQNSNRSLVRDSVSTMTLRDL 580
Score = 57.4 bits (119), Expect(2) = 5e-024
Identities = 22/24 (91%), Positives = 22/24 (91%)
Frame = +2 / +1
Query: 272 AHREHDQQAGHLLQAPQRPPQEGV 343
AHREH Q AGHLLQAPQRPPQEGV
Sbjct: 235 AHREHHQPAGHLLQAPQRPPQEGV 306
Score = 53.3 bits (110), Expect(2) = 3e-033
Identities = 25/48 (52%), Positives = 28/48 (58%)
Frame = -3 / -1
Query: 605 HGCDRITYQGPVGVLQVNDLLPQPSRFLLVMLNGDLCNRTSCAGVVTG 462
HG DRI++Q PV VLQ DLL Q LLV+L D CNR V G
Sbjct: 565 HGADRISHQ*PV*VLQATDLLAQLGGLLLVVLGIDFCNRARVGCVTVG 422
Score = 42.8 bits (87), Expect(2) = 1e-046
Identities = 24/49 (48%), Positives = 29/49 (59%)
Frame = +1 / +3
Query: 460 QPVTTPAQLVRLQRSPFSITSRNLLG*GSRSLTCRTPTGP**VILSQP* 606
+P T L RLQ+S S TSR+ SRS+ C+T TG * ILS P*
Sbjct: 420 RPTVTHPTLARLQKSMPSTTSRSPPSCASRSVACKTQTGHW*EILSAP* 566
>gb|BU969355.1|BU969355 HB11E16r BC Hordeum vulgare subsp. vulgare cDNA clone HB11E16
5-PRIME, mRNA sequence
Length = 463
Score = 170 bits (365), Expect(2) = 4e-045
Identities = 71/78 (91%), Positives = 75/78 (96%)
Frame = +3 / +1
Query: 249 GKGKTEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANNS 428
G+G+ EIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVAL+VFSSRGRLYEY+NNS
Sbjct: 154 GRGRIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALVVFSSRGRLYEYSNNS 333
Query: 429 VKGTIERYKKATSDNSSA 482
VK TIERYKKATSD SSA
Sbjct: 334 VKATIERYKKATSDTSSA 387
Score = 107 bits (228), Expect = 2e-022
Identities = 50/74 (67%), Positives = 52/74 (70%)
Frame = -1 / -3
Query: 481 ALELSLVAFLYLSMVPFTLLLAYS*RRPRLEKXXXXXXXXXXXXXXXAFLRRPLRRLQKV 302
ALE+SLVAFLYLSMV TLLL YS*RRPRLEK AF R PLRRLQKV
Sbjct: 386 ALEVSLVAFLYLSMVALTLLLEYS*RRPRLEKTTSATSASQSTESSYAFFRSPLRRLQKV 207
Query: 301 TCLLVVFSMRLISV 260
TC VVFSMRLIS+
Sbjct: 206 TCRFVVFSMRLISI 165
Score = 32.7 bits (65), Expect(2) = 4e-045
Identities = 17/32 (53%), Positives = 20/32 (62%)
Frame = +1 / +2
Query: 466 VTTPAQLVRLQRSPFSITSRNLLG*GSRSLTC 561
+ TP LV+ QRS S TSRNL *G+R C
Sbjct: 368 LVTPPALVQSQRSMPSTTSRNLQS*GNR*PPC 463
>gb|BU995744.1|BU995744 HM11D17r HM Hordeum vulgare subsp. vulgare cDNA clone HM11D17
5-PRIME, mRNA sequence
Length = 624
Score = 166 bits (358), Expect(2) = 9e-045
Identities = 69/82 (84%), Positives = 76/82 (92%)
Frame = +3 / +2
Query: 237 NGGRGKGKTEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEY 416
+G G+G+ EIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVAL+VFSSRGRLYEY
Sbjct: 200 SGKMGRGRIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALVVFSSRGRLYEY 379
Query: 417 ANNSVKGTIERYKKATSDNSSA 482
+NNSVK TIERYKKA SD S++
Sbjct: 380 SNNSVKATIERYKKANSDTSNS 445
Score = 109 bits (233), Expect(3) = 1e-031
Identities = 50/73 (68%), Positives = 54/73 (73%)
Frame = -1 / -1
Query: 478 LELSLVAFLYLSMVPFTLLLAYS*RRPRLEKXXXXXXXXXXXXXXXAFLRRPLRRLQKVT 299
L++SL+AFLYLSMV FTLL YS*RRPRLEK AFLRRPLRRLQKVT
Sbjct: 441 LDVSLLAFLYLSMVAFTLLFEYS*RRPRLEKTTRATSASQSTESSYAFLRRPLRRLQKVT 262
Query: 298 CLLVVFSMRLISV 260
C LVVFSMRLIS+
Sbjct: 261 CRLVVFSMRLISI 223
Score = 35.0 bits (70), Expect(3) = 1e-031
Identities = 17/35 (48%), Positives = 18/35 (51%)
Frame = -3 / -3
Query: 566 VLQVNDLLPQPSRFLLVMLNGDLCNRTSCAGVVTG 462
VLQ DLL Q LLV+L D CNR V G
Sbjct: 526 VLQATDLLAQLGGLLLVVLGIDFCNRARVGCVTVG 422
Score = 34.5 bits (69), Expect(2) = 9e-045
Identities = 17/38 (44%), Positives = 22/38 (57%)
Frame = +1 / +3
Query: 460 QPVTTPAQLVRLQRSPFSITSRNLLG*GSRSLTCRTPT 573
+P T L RLQ+S S TSR+ SRS+ C+T T
Sbjct: 420 RPTVTHPTLARLQKSMPSTTSRSPPSCASRSVACKTQT 533
Score = 30.4 bits (60), Expect(3) = 1e-031
Identities = 12/29 (41%), Positives = 19/29 (65%)
Frame = -3 / -3
Query: 659 LSESFV*PSLQVLKFLVAHGCDRITYQGP 573
L +F+ P+ ++LK HG DRI++Q P
Sbjct: 622 LGYAFLQPAFKLLKIPQGHGADRISHQ*P 536
>gb|AL506475.1|AL506475 AL506475 Hordeum vulgare Barke developing caryopsis (3.-15.DAP)
Hordeum vulgare subsp. vulgare cDNA clone HY03E09T 5',
mRNA sequence
Length = 673
Score = 165 bits (354), Expect(2) = 3e-044
Identities = 68/78 (87%), Positives = 74/78 (94%)
Frame = +3 / +1
Query: 249 GKGKTEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANNS 428
G+G+ EIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVAL+VFSSRGRLYEY+NNS
Sbjct: 199 GRGRIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALVVFSSRGRLYEYSNNS 378
Query: 429 VKGTIERYKKATSDNSSA 482
VK TIERYKKA SD S++
Sbjct: 379 VKATIERYKKANSDTSNS 432
Score = 109 bits (233), Expect(3) = 2e-029
Identities = 50/73 (68%), Positives = 54/73 (73%)
Frame = -1 / -3
Query: 478 LELSLVAFLYLSMVPFTLLLAYS*RRPRLEKXXXXXXXXXXXXXXXAFLRRPLRRLQKVT 299
L++SL+AFLYLSMV FTLL YS*RRPRLEK AFLRRPLRRLQKVT
Sbjct: 428 LDVSLLAFLYLSMVAFTLLFEYS*RRPRLEKTTRATSASQSTESSYAFLRRPLRRLQKVT 249
Query: 298 CLLVVFSMRLISV 260
C LVVFSMRLIS+
Sbjct: 248 CRLVVFSMRLISI 210
Score = 57.4 bits (119), Expect(3) = 1e-021
Identities = 22/24 (91%), Positives = 22/24 (91%)
Frame = +2 / +3
Query: 272 AHREHDQQAGHLLQAPQRPPQEGV 343
AHREH Q AGHLLQAPQRPPQEGV
Sbjct: 222 AHREHHQPAGHLLQAPQRPPQEGV 293
Score = 55.6 bits (115), Expect(3) = 1e-021
Identities = 22/39 (56%), Positives = 32/39 (82%)
Frame = +3 / +1
Query: 456 KATSDNSSAAGTIAEVTIQHYKQESARLRQQIVNLQNSN 572
K + ++S +GT+AEV Q+Y+QES++LRQQI +LQNSN
Sbjct: 403 KKANSDTSNSGTVAEVNAQYYQQESSKLRQQISSLQNSN 519
Score = 35.0 bits (70), Expect(3) = 2e-029
Identities = 17/35 (48%), Positives = 18/35 (51%)
Frame = -3 / -2
Query: 566 VLQVNDLLPQPSRFLLVMLNGDLCNRTSCAGVVTG 462
VLQ DLL Q LLV+L D CNR V G
Sbjct: 513 VLQATDLLAQLGGLLLVVLGIDFCNRARVGCVTVG 409
Score = 34.5 bits (69), Expect(2) = 3e-044
Identities = 17/38 (44%), Positives = 22/38 (57%)
Frame = +1 / +2
Query: 460 QPVTTPAQLVRLQRSPFSITSRNLLG*GSRSLTCRTPT 573
+P T L RLQ+S S TSR+ SRS+ C+T T
Sbjct: 407 RPTVTHPTLARLQKSMPSTTSRSPPSCASRSVACKTQT 520
Score = 28.6 bits (56), Expect(3) = 1e-021
Identities = 11/16 (68%), Positives = 13/16 (81%)
Frame = +2 / +3
Query: 431 EGHH*EVQEGNQ*QLQ 478
E HH*EVQ+G Q* +Q
Sbjct: 381 ESHH*EVQKGQQ*HIQ 428
Score = 23.1 bits (44), Expect(3) = 2e-029
Identities = 9/17 (52%), Positives = 11/17 (64%)
Frame = -3 / -2
Query: 623 LKFLVAHGCDRITYQGP 573
LK HG DRI++Q P
Sbjct: 573 LKIPQGHGADRISHQ*P 523
>gb|BU995877.1|BU995877 HM11K13r HM Hordeum vulgare subsp. vulgare cDNA clone HM11K13
5-PRIME, mRNA sequence
Length = 568
Score = 165 bits (354), Expect(2) = 3e-044
Identities = 68/78 (87%), Positives = 74/78 (94%)
Frame = +3 / +2
Query: 249 GKGKTEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANNS 428
G+G+ EIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVAL+VFSSRGRLYEY+NNS
Sbjct: 212 GRGRIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALVVFSSRGRLYEYSNNS 391
Query: 429 VKGTIERYKKATSDNSSA 482
VK TIERYKKA SD S++
Sbjct: 392 VKATIERYKKANSDTSNS 445
Score = 109 bits (233), Expect(2) = 8e-028
Identities = 50/73 (68%), Positives = 54/73 (73%)
Frame = -1 / -2
Query: 478 LELSLVAFLYLSMVPFTLLLAYS*RRPRLEKXXXXXXXXXXXXXXXAFLRRPLRRLQKVT 299
L++SL+AFLYLSMV FTLL YS*RRPRLEK AFLRRPLRRLQKVT
Sbjct: 441 LDVSLLAFLYLSMVAFTLLFEYS*RRPRLEKTTRATSASQSTESSYAFLRRPLRRLQKVT 262
Query: 298 CLLVVFSMRLISV 260
C LVVFSMRLIS+
Sbjct: 261 CRLVVFSMRLISI 223
Score = 35.0 bits (70), Expect(2) = 8e-028
Identities = 17/35 (48%), Positives = 18/35 (51%)
Frame = -3 / -1
Query: 566 VLQVNDLLPQPSRFLLVMLNGDLCNRTSCAGVVTG 462
VLQ DLL Q LLV+L D CNR V G
Sbjct: 526 VLQATDLLAQLGGLLLVVLGIDFCNRARVGCVTVG 422
Score = 34.5 bits (69), Expect(2) = 3e-044
Identities = 17/38 (44%), Positives = 22/38 (57%)
Frame = +1 / +3
Query: 460 QPVTTPAQLVRLQRSPFSITSRNLLG*GSRSLTCRTPT 573
+P T L RLQ+S S TSR+ SRS+ C+T T
Sbjct: 420 RPTVTHPTLARLQKSMPSTTSRSPPSCASRSVACKTQT 533
>gb|BU979019.1|BU979019 HA14O21r HA Hordeum vulgare subsp. vulgare cDNA clone HA14O21
5-PRIME, mRNA sequence
Length = 633
Score = 168 bits (361), Expect(2) = 4e-044
Identities = 71/93 (76%), Positives = 80/93 (86%)
Frame = +3 / +2
Query: 249 GKGKTEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANNS 428
G+G+ EIKRIENTT+RQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEY+NNS
Sbjct: 74 GRGRIEIKRIENTTSRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYSNNS 253
Query: 429 VKGTIERYKKATSDNSSAAGTIAEVTIQHYKQE 527
VK TIERYKKA + S++ + EV Q Y Q+
Sbjct: 254 VKATIERYKKAHACGSTSGAPLIEVNAQQYYQQ 352
Score = 122 bits (261), Expect(2) = 2e-027
Identities = 51/105 (48%), Positives = 78/105 (74%)
Frame = +3 / +2
Query: 471 NSSAAGTIAEVTIQHYKQESARLRQQIVNLQNSNRALIGDSITTMSHKELKHLETRLDKA 650
++S A I Q+Y+QE+A++R QI LQN+N+ L+GDS+ +S KELK LE+RL+K
Sbjct: 299 STSGAPLIEVNAQQYYQQETAKMRHQIQMLQNTNKHLVGDSVGNLSLKELKQLESRLEKG 478
Query: 651 LGKIRAKKNDVLCSEVEYMQRREMELQNDNLYLRSRVDENERAQQ 785
+ KIRA+KN++L E+ YM +RE+ELQ+DN+ LR+++ E E+ Q
Sbjct: 479 IAKIRARKNELLSCEINYMVKREIELQSDNIDLRTKIAEGEQQLQ 613
Score = 80.3 bits (169), Expect(2) = 7e-027
Identities = 40/73 (54%), Positives = 45/73 (61%)
Frame = -1 / -1
Query: 478 LELSLVAFLYLSMVPFTLLLAYS*RRPRLEKXXXXXXXXXXXXXXXAFLRRPLRRLQKVT 299
+E AFLYLS+V TLLL YS*RRPRLEK AF + P RRLQKVT
Sbjct: 303 VEPQACAFLYLSIVALTLLLEYS*RRPRLEKTMSATSASHRTESS*AFFKSPFRRLQKVT 124
Query: 298 CLLVVFSMRLISV 260
LVVFS+ LIS+
Sbjct: 123 WRLVVFSILLISI 85
Score = 61.1 bits (127), Expect(2) = 7e-027
Identities = 34/79 (43%), Positives = 43/79 (54%)
Frame = -1 / -1
Query: 784 CCALSFSSTRLLKYKLSFCNSISLLCMYSTSEHSTSFFFALIFPRALSNLVSKCLSSLWL 605
C S S+ +L+ LS +SISLL M S+ +SFF ALIF S +S C SSL
Sbjct: 612 CNCCSPSAILVLRSMLSL*SSISLLTM*LISQDRSSFFLALIFAMPFSRRLSSCFSSLSD 433
Query: 604 MVVIESPIRALLEFCKLTI 548
ESP + LL FC + I
Sbjct: 432 RFPTESPTKCLLVFCSIWI 376
Score = 30.9 bits (61), Expect(2) = 4e-044
Identities = 23/75 (30%), Positives = 38/75 (50%)
Frame = +1 / +3
Query: 517 TSRNLLG*GSRSLTCRTPTGP**VILSQP*ATRNLSTWRLG*TKLSERLEQKRTMCCVLK 696
TS+ L +RS C+T T VIL +R+ S+ + K +R R +++
Sbjct: 345 TSKKLQRCATRSRCCKTLTSTWLVILLGTYHSRS*SSSKAASRKALQRSGPGRMSSYLVR 524
Query: 697 SSTCREGKWSCRMTT 741
S+T +G+ S R+TT
Sbjct: 525 STTWSKGR*SFRVTT 569
Score = 24.0 bits (46), Expect(2) = 2e-027
Identities = 9/15 (60%), Positives = 12/15 (80%)
Frame = +2 / +1
Query: 299 GHLLQAPQRPPQEGV 343
G LLQAP+R +EG+
Sbjct: 124 GDLLQAPERALEEGL 168
>gb|BU979487.1|BU979487 HA16F04r HA Hordeum vulgare subsp. vulgare cDNA clone HA16F04
5-PRIME, mRNA sequence
Length = 629
Score = 168 bits (361), Expect(2) = 4e-044
Identities = 71/93 (76%), Positives = 80/93 (86%)
Frame = +3 / +3
Query: 249 GKGKTEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANNS 428
G+G+ EIKRIENTT+RQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEY+NNS
Sbjct: 126 GRGRIEIKRIENTTSRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYSNNS 305
Query: 429 VKGTIERYKKATSDNSSAAGTIAEVTIQHYKQE 527
VK TIERYKKA + S++ + EV Q Y Q+
Sbjct: 306 VKATIERYKKAHACGSTSGAPLIEVNAQQYYQQ 404
Score = 112 bits (239), Expect(2) = 2e-024
Identities = 47/93 (50%), Positives = 70/93 (75%)
Frame = +3 / +3
Query: 471 NSSAAGTIAEVTIQHYKQESARLRQQIVNLQNSNRALIGDSITTMSHKELKHLETRLDKA 650
++S A I Q+Y+QE+A++R QI LQN+N+ L+GDS+ +S KELK LE+RL+K
Sbjct: 351 STSGAPLIEVNAQQYYQQETAKMRHQIQMLQNTNKHLVGDSVGNLSLKELKQLESRLEKG 530
Query: 651 LGKIRAKKNDVLCSEVEYMQRREMELQNDNLYL 749
+ KIRA+KN++L E+ YM +RE+ELQ+DN+ L
Sbjct: 531 IAKIRARKNELLSCEINYMVKREIELQSDNIDL 629
Score = 80.3 bits (169), Expect(2) = 2e-025
Identities = 40/73 (54%), Positives = 45/73 (61%)
Frame = -1 / -2
Query: 478 LELSLVAFLYLSMVPFTLLLAYS*RRPRLEKXXXXXXXXXXXXXXXAFLRRPLRRLQKVT 299
+E AFLYLS+V TLLL YS*RRPRLEK AF + P RRLQKVT
Sbjct: 355 VEPQACAFLYLSIVALTLLLEYS*RRPRLEKTMSATSASHRTESS*AFFKSPFRRLQKVT 176
Query: 298 CLLVVFSMRLISV 260
LVVFS+ LIS+
Sbjct: 175 WRLVVFSILLISI 137
Score = 56.1 bits (116), Expect(2) = 2e-025
Identities = 30/64 (46%), Positives = 36/64 (56%)
Frame = -1 / -2
Query: 739 LSFCNSISLLCMYSTSEHSTSFFFALIFPRALSNLVSKCLSSLWLMVVIESPIRALLEFC 560
LS +SISLL M S+ +SFF ALIF S +S C SSL ESP + LL FC
Sbjct: 619 LSL*SSISLLTM*LISQDRSSFFLALIFAMPFSRRLSSCFSSLSDRFPTESPTKCLLVFC 440
Query: 559 KLTI 548
+ I
Sbjct: 439 SIWI 428
Score = 30.9 bits (61), Expect(2) = 4e-044
Identities = 23/75 (30%), Positives = 38/75 (50%)
Frame = +1 / +1
Query: 517 TSRNLLG*GSRSLTCRTPTGP**VILSQP*ATRNLSTWRLG*TKLSERLEQKRTMCCVLK 696
TS+ L +RS C+T T VIL +R+ S+ + K +R R +++
Sbjct: 397 TSKKLQRCATRSRCCKTLTSTWLVILLGTYHSRS*SSSKAASRKALQRSGPGRMSSYLVR 576
Query: 697 SSTCREGKWSCRMTT 741
S+T +G+ S R+TT
Sbjct: 577 STTWSKGR*SFRVTT 621
Score = 24.0 bits (46), Expect(2) = 2e-024
Identities = 9/15 (60%), Positives = 12/15 (80%)
Frame = +2 / +2
Query: 299 GHLLQAPQRPPQEGV 343
G LLQAP+R +EG+
Sbjct: 176 GDLLQAPERALEEGL 220
>gb|BQ458971.1|BQ458971 HA02K21r HA Hordeum vulgare subsp. vulgare cDNA clone HA02K21
5-PRIME, mRNA sequence
Length = 606
Score = 168 bits (361), Expect(2) = 4e-044
Identities = 71/93 (76%), Positives = 80/93 (86%)
Frame = +3 / +1
Query: 249 GKGKTEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANNS 428
G+G+ EIKRIENTT+RQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEY+NNS
Sbjct: 103 GRGRIEIKRIENTTSRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYSNNS 282
Query: 429 VKGTIERYKKATSDNSSAAGTIAEVTIQHYKQE 527
VK TIERYKKA + S++ + EV Q Y Q+
Sbjct: 283 VKATIERYKKAHACGSTSGAPLIEVNAQQYYQQ 381
Score = 112 bits (239), Expect(2) = 2e-024
Identities = 47/93 (50%), Positives = 70/93 (75%)
Frame = +3 / +1
Query: 471 NSSAAGTIAEVTIQHYKQESARLRQQIVNLQNSNRALIGDSITTMSHKELKHLETRLDKA 650
++S A I Q+Y+QE+A++R QI LQN+N+ L+GDS+ +S KELK LE+RL+K
Sbjct: 328 STSGAPLIEVNAQQYYQQETAKMRHQIQMLQNTNKHLVGDSVGNLSLKELKQLESRLEKG 507
Query: 651 LGKIRAKKNDVLCSEVEYMQRREMELQNDNLYL 749
+ KIRA+KN++L E+ YM +RE+ELQ+DN+ L
Sbjct: 508 IAKIRARKNELLSCEINYMVKREIELQSDNIDL 606
Score = 80.3 bits (169), Expect(2) = 2e-025
Identities = 40/73 (54%), Positives = 45/73 (61%)
Frame = -1 / -2
Query: 478 LELSLVAFLYLSMVPFTLLLAYS*RRPRLEKXXXXXXXXXXXXXXXAFLRRPLRRLQKVT 299
+E AFLYLS+V TLLL YS*RRPRLEK AF + P RRLQKVT
Sbjct: 332 VEPQACAFLYLSIVALTLLLEYS*RRPRLEKTMSATSASHRTESS*AFFKSPFRRLQKVT 153
Query: 298 CLLVVFSMRLISV 260
LVVFS+ LIS+
Sbjct: 152 WRLVVFSILLISI 114
Score = 56.1 bits (116), Expect(2) = 2e-025
Identities = 30/64 (46%), Positives = 36/64 (56%)
Frame = -1 / -2
Query: 739 LSFCNSISLLCMYSTSEHSTSFFFALIFPRALSNLVSKCLSSLWLMVVIESPIRALLEFC 560
LS +SISLL M S+ +SFF ALIF S +S C SSL ESP + LL FC
Sbjct: 596 LSL*SSISLLTM*LISQDRSSFFLALIFAMPFSRRLSSCFSSLSDRFPTESPTKCLLVFC 417
Query: 559 KLTI 548
+ I
Sbjct: 416 SIWI 405
Score = 30.9 bits (61), Expect(2) = 4e-044
Identities = 23/75 (30%), Positives = 38/75 (50%)
Frame = +1 / +2
Query: 517 TSRNLLG*GSRSLTCRTPTGP**VILSQP*ATRNLSTWRLG*TKLSERLEQKRTMCCVLK 696
TS+ L +RS C+T T VIL +R+ S+ + K +R R +++
Sbjct: 374 TSKKLQRCATRSRCCKTLTSTWLVILLGTYHSRS*SSSKAASRKALQRSGPGRMSSYLVR 553
Query: 697 SSTCREGKWSCRMTT 741
S+T +G+ S R+TT
Sbjct: 554 STTWSKGR*SFRVTT 598
Score = 24.0 bits (46), Expect(2) = 2e-024
Identities = 9/15 (60%), Positives = 12/15 (80%)
Frame = +2 / +3
Query: 299 GHLLQAPQRPPQEGV 343
G LLQAP+R +EG+
Sbjct: 153 GDLLQAPERALEEGL 197
>gb|CA021258.1|CA021258 HZ39J06r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ39J06
5-PRIME, mRNA sequence
Length = 607
Score = 165 bits (355), Expect(2) = 3e-043
Identities = 70/93 (75%), Positives = 79/93 (84%)
Frame = +3 / +2
Query: 249 GKGKTEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANNS 428
G+G+ EIKRIENTT+RQVTFCKRRNGLLKKAYEL VLCDAEVALIVFSSRGRLYEY+NNS
Sbjct: 71 GRGRIEIKRIENTTSRQVTFCKRRNGLLKKAYELYVLCDAEVALIVFSSRGRLYEYSNNS 250
Query: 429 VKGTIERYKKATSDNSSAAGTIAEVTIQHYKQE 527
VK TIERYKKA + S++ + EV Q Y Q+
Sbjct: 251 VKATIERYKKAHACGSTSGAPLIEVNAQQYYQQ 349
Score = 121 bits (259), Expect(2) = 3e-027
Identities = 50/102 (49%), Positives = 77/102 (75%)
Frame = +3 / +2
Query: 471 NSSAAGTIAEVTIQHYKQESARLRQQIVNLQNSNRALIGDSITTMSHKELKHLETRLDKA 650
++S A I Q+Y+QE+A++R QI LQN+N+ L+GDS+ +S KELK LE+RL+K
Sbjct: 296 STSGAPLIEVNAQQYYQQETAKMRHQIQMLQNTNKHLVGDSVGNLSLKELKQLESRLEKG 475
Query: 651 LGKIRAKKNDVLCSEVEYMQRREMELQNDNLYLRSRVDENER 776
+ KIRA+KN++L E+ YM +RE+ELQ+DN+ LR+++ E E+
Sbjct: 476 IAKIRARKNELLSCEINYMVKREIELQSDNIDLRTKIAEGEQ 601
Score = 79.0 bits (166), Expect(2) = 8e-026
Identities = 40/73 (54%), Positives = 45/73 (61%)
Frame = -1 / -2
Query: 478 LELSLVAFLYLSMVPFTLLLAYS*RRPRLEKXXXXXXXXXXXXXXXAFLRRPLRRLQKVT 299
+E AFLYLS+V TLLL YS*RRPRLEK AF + P RRLQKVT
Sbjct: 300 VEPQACAFLYLSIVALTLLLEYS*RRPRLEKTMSATSASHRT*SS*AFFKSPFRRLQKVT 121
Query: 298 CLLVVFSMRLISV 260
LVVFS+ LIS+
Sbjct: 120 WRLVVFSILLISI 82
Score = 58.8 bits (122), Expect(2) = 8e-026
Identities = 32/73 (43%), Positives = 41/73 (56%)
Frame = -1 / -2
Query: 766 SSTRLLKYKLSFCNSISLLCMYSTSEHSTSFFFALIFPRALSNLVSKCLSSLWLMVVIES 587
S+ +L+ LS +SISLL M S+ +SFF ALIF S +S C SSL ES
Sbjct: 591 SAILVLRSMLSL*SSISLLTM*LISQDRSSFFLALIFAMPFSRRLSSCFSSLSDRFPTES 412
Query: 586 PIRALLEFCKLTI 548
P + LL FC + I
Sbjct: 411 PTKCLLVFCSIWI 373
Score = 30.9 bits (61), Expect(2) = 3e-043
Identities = 23/75 (30%), Positives = 38/75 (50%)
Frame = +1 / +3
Query: 517 TSRNLLG*GSRSLTCRTPTGP**VILSQP*ATRNLSTWRLG*TKLSERLEQKRTMCCVLK 696
TS+ L +RS C+T T VIL +R+ S+ + K +R R +++
Sbjct: 342 TSKKLQRCATRSRCCKTLTSTWLVILLGTYHSRS*SSSKAASRKALQRSGPGRMSSYLVR 521
Query: 697 SSTCREGKWSCRMTT 741
S+T +G+ S R+TT
Sbjct: 522 STTWSKGR*SFRVTT 566
Score = 24.0 bits (46), Expect(2) = 3e-027
Identities = 9/15 (60%), Positives = 12/15 (80%)
Frame = +2 / +1
Query: 299 GHLLQAPQRPPQEGV 343
G LLQAP+R +EG+
Sbjct: 121 GDLLQAPERALEEGL 165
>gb|BU968939.1|BU968939 HB10A19r BC Hordeum vulgare subsp. vulgare cDNA clone HB10A19
5-PRIME, mRNA sequence
Length = 507
Score = 124 bits (265), Expect(3) = 1e-041
Identities = 50/72 (69%), Positives = 61/72 (84%)
Frame = +3 / +2
Query: 570 NRALIGDSITTMSHKELKHLETRLDKALGKIRAKKNDVLCSEVEYMQRREMELQNDNLYL 749
NR LIGD++ TMSH++LK LE RLDK LGKIRA+KN++L +E+EYMQRREMELQN+N YL
Sbjct: 11 NRTLIGDTMATMSHRDLKQLEGRLDKGLGKIRARKNELLSAEIEYMQRREMELQNNNFYL 190
Query: 750 RSRVDENERAQQ 785
R +V E ER QQ
Sbjct: 191 REKVAETERGQQ 226
Score = 107 bits (228), Expect(2) = 5e-029
Identities = 48/71 (67%), Positives = 52/71 (73%)
Frame = -1 / -1
Query: 784 CCALSFSSTRLLKYKLSFCNSISLLCMYSTSEHSTSFFFALIFPRALSNLVSKCLSSLWL 605
CC LS S+T LK KL FC+SISLLCMYS S S SFF ALIFPR LS+L S C SLWL
Sbjct: 225 CCPLSVSATFSLK*KLLFCSSISLLCMYSISALSNSFFLALIFPRPLSSLPSSCFRSLWL 46
Query: 604 MVVIESPIRAL 572
MV + SPIR L
Sbjct: 45 MVAMVSPIRVL 13
Score = 88.1 bits (186), Expect(3) = 1e-022
Identities = 45/77 (58%), Positives = 51/77 (66%)
Frame = -3 / -3
Query: 800 HHVRCLLCPFILINPAP*VQVVILQLHFPSLHVLDFRTQHIVLFCSNLSESFV*PSLQVL 621
H R LL PF L + P V+VVILQLHFPSLHVL+F +L CSNLS +FV PSLQ+L
Sbjct: 241 HVQRLLLPPFSLSDFFPQVEVVILQLHFPSLHVLNFSA**FILSCSNLS*AFVQPSLQLL 62
Query: 620 KFLVAHGCDRITYQGPV 570
VAHG I Y PV
Sbjct: 61 *VSVAHGSHGIAY*SPV 11
Score = 88.1 bits (186), Expect(2) = 2e-022
Identities = 44/74 (59%), Positives = 50/74 (67%)
Frame = +1 / +3
Query: 571 TGP**VILSQP*ATRNLSTWRLG*TKLSERLEQKRTMCCVLKSSTCREGKWSCRMTTCT* 750
TG ** I P*AT S+WR G TK ERLEQ+R LK STCREGKWSCR+TT T*
Sbjct: 12 TGL**AIPWLP*ATET*SSWREGWTKA*ERLEQERMNY*ALKLSTCREGKWSCRITTST* 191
Query: 751 GAGLMRMKGHNRQR 792
G +R+KG N +R
Sbjct: 192 GKKSLRLKGGNSRR 233
Score = 54.7 bits (113), Expect(3) = 1e-041
Identities = 20/25 (80%), Positives = 24/25 (96%)
Frame = +3 / +2
Query: 858 RSFLQFNIVQQPQFYSQQEDRKDFN 932
R+FLQFNI+QQPQ+Y+QQEDRK FN
Sbjct: 299 RTFLQFNIMQQPQYYTQQEDRKTFN 373
Score = 41.4 bits (84), Expect(2) = 5e-029
Identities = 18/25 (72%), Positives = 19/25 (76%)
Frame = -1 / -1
Query: 931 LKSFRSSC*E*N*GCCTMLNCRKLL 857
LK F SSC * *GCC MLNCRK+L
Sbjct: 372 LKVFLSSCWV*Y*GCCMMLNCRKVL 298
Score = 38.6 bits (78), Expect(2) = 2e-022
Identities = 17/26 (65%), Positives = 20/26 (76%)
Frame = +2 / +1
Query: 854 NKELPAVQHRAAASVLFSAGGPERLQ 931
++ LPAVQH AAASVL AGG + LQ
Sbjct: 295 SENLPAVQHHAAASVLHPAGG*KNLQ 372
Score = 30.4 bits (60), Expect(3) = 1e-041
Identities = 13/25 (52%), Positives = 14/25 (56%)
Frame = +3 / +2
Query: 780 QQTANMMGAPSTSEYQQHGFTPYDP 854
QQT NMMGA STS + DP
Sbjct: 224 QQTLNMMGAASTSNEYEQNMIQCDP 298
Score = 28.6 bits (56), Expect(3) = 1e-022
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = -1 / -1
Query: 886 CTMLNCRKLLIGS*GVKPCC*YSLVDGAPIMFAVCC 779
C M+ + ++GS + C V+ APIMF VCC
Sbjct: 330 CCMMLNCRKVLGSHCIIFCSYSLDVEAAPIMFNVCC 223
Score = 28.1 bits (55), Expect(3) = 1e-022
Identities = 13/17 (76%), Positives = 13/17 (76%)
Frame = -2 / -2
Query: 915 PPAENRTEAAARC*TAG 865
PPA TEAAA C*TAG
Sbjct: 356 PPAGCSTEAAA*C*TAG 306
>gb|BI776462.2|BI776462 EBpi05_SQ001_H07_R pistil, 8 DPA, no treatment, cv Optic, EBpi05
Hordeum vulgare subsp. vulgare cDNA clone
EBpi05_SQ001_H07 5', mRNA sequence
Length = 361
Score = 160 bits (343), Expect(2) = 2e-041
Identities = 65/91 (71%), Positives = 78/91 (85%)
Frame = +3 / +1
Query: 513 HYKQESARLRQQIVNLQNSNRALIGDSITTMSHKELKHLETRLDKALGKIRAKKNDVLCS 692
HY+QESA+LRQQI LQNSNR LIGD++ TMSH++LK LE RLDK LGKIRA+KN++L +
Sbjct: 10 HYQQESAKLRQQITTLQNSNRTLIGDTMATMSHRDLKQLEGRLDKGLGKIRARKNELLSA 189
Query: 693 EVEYMQRREMELQNDNLYLRSRVDENERAQQ 785
E+EYMQRREMELQN+N YLR +V E ER QQ
Sbjct: 190 EIEYMQRREMELQNNNFYLREKVAETERGQQ 282
Score = 122 bits (262), Expect(2) = 2e-029
Identities = 54/79 (68%), Positives = 59/79 (74%)
Frame = -1 / -3
Query: 784 CCALSFSSTRLLKYKLSFCNSISLLCMYSTSEHSTSFFFALIFPRALSNLVSKCLSSLWL 605
CC LS S+T LK KL FC+SISLLCMYS S S SFF ALIFPR LS+L S C SLWL
Sbjct: 281 CCPLSVSATFSLK*KLLFCSSISLLCMYSISALSNSFFLALIFPRPLSSLPSSCFRSLWL 102
Query: 604 MVVIESPIRALLEFCKLTI 548
MV + SPIR LLEFCK+ I
Sbjct: 101 MVAMVSPIRVLLEFCKVVI 45
Score = 112 bits (240), Expect = 3e-024
Identities = 58/97 (59%), Positives = 66/97 (68%)
Frame = -3 / -2
Query: 800 HHVRCLLCPFILINPAP*VQVVILQLHFPSLHVLDFRTQHIVLFCSNLSESFV*PSLQVL 621
H R LL PF L + P V+VVILQLHFPSLHVL+F +L CSNLS +FV PSLQ+L
Sbjct: 297 HVQRLLLPPFSLSDFFPQVEVVILQLHFPSLHVLNFSA**FILSCSNLS*AFVQPSLQLL 118
Query: 620 KFLVAHGCDRITYQGPVGVLQVNDLLPQPSRFLLVML 510
VAHG I Y PVGVLQ LLPQ RFLLV++
Sbjct: 117 *VSVAHGSHGIAY*SPVGVLQGGYLLPQLCRFLLVVV 7
Score = 112 bits (239), Expect = 5e-024
Identities = 56/92 (60%), Positives = 63/92 (68%)
Frame = +1 / +2
Query: 517 TSRNLLG*GSRSLTCRTPTGP**VILSQP*ATRNLSTWRLG*TKLSERLEQKRTMCCVLK 696
TSRNL *G+R CRTPTG ** I P*AT S+WR G TK ERLEQ+R LK
Sbjct: 14 TSRNLQS*GNR*PPCRTPTGL**AIPWLP*ATET*SSWREGWTKA*ERLEQERMNY*ALK 193
Query: 697 SSTCREGKWSCRMTTCT*GAGLMRMKGHNRQR 792
STCREGKWSCR+TT T*G +R+KG N +R
Sbjct: 194 LSTCREGKWSCRITTST*GKKSLRLKGGNSRR 289
Score = 30.4 bits (60), Expect(2) = 2e-041
Identities = 13/25 (52%), Positives = 14/25 (56%)
Frame = +3 / +1
Query: 780 QQTANMMGAPSTSEYQQHGFTPYDP 854
QQT NMMGA STS + DP
Sbjct: 280 QQTLNMMGAASTSNEYEQNMIQCDP 354
Score = 26.7 bits (52), Expect(2) = 2e-029
Identities = 9/12 (75%), Positives = 10/12 (83%)
Frame = -1 / -3
Query: 814 VDGAPIMFAVCC 779
V+ APIMF VCC
Sbjct: 314 VEAAPIMFNVCC 279
>gb|CA025113.1|CA025113 HZ51D24r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ51D24
5-PRIME, mRNA sequence
Length = 490
Score = 168 bits (361), Expect = 7e-041
Identities = 71/93 (76%), Positives = 80/93 (86%)
Frame = +3 / +1
Query: 249 GKGKTEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANNS 428
G+G+ EIKRIENTT+RQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEY+NNS
Sbjct: 106 GRGRIEIKRIENTTSRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYSNNS 285
Query: 429 VKGTIERYKKATSDNSSAAGTIAEVTIQHYKQE 527
VK TIERYKKA + S++ + EV Q Y Q+
Sbjct: 286 VKATIERYKKAHACGSTSGAPLIEVNAQQYYQQ 384
>gb|BM442374.2|BM442374 EBan01_SQ003_A06_R anther, yellow stage, no treatment, cv Optic,
EBan01 Hordeum vulgare subsp. vulgare cDNA clone
EBan01_SQ003_A06 5', mRNA sequence
Length = 372
Score = 167 bits (359), Expect = 1e-040
Identities = 70/78 (89%), Positives = 74/78 (94%)
Frame = +3 / +2
Query: 249 GKGKTEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANNS 428
G+G+ EIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVAL+VFSSRGRLYEY+NNS
Sbjct: 116 GRGRIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALVVFSSRGRLYEYSNNS 295
Query: 429 VKGTIERYKKATSDNSSA 482
VK TIERYKKATSD SA
Sbjct: 296 VKATIERYKKATSDTFSA 349
Score = 105 bits (224), Expect(2) = 5e-022
Identities = 49/74 (66%), Positives = 52/74 (70%)
Frame = -1 / -1
Query: 481 ALELSLVAFLYLSMVPFTLLLAYS*RRPRLEKXXXXXXXXXXXXXXXAFLRRPLRRLQKV 302
AL++SLVAFLYLSMV TLLL YS*RRPRLEK AF R PLRRLQKV
Sbjct: 348 ALKVSLVAFLYLSMVALTLLLEYS*RRPRLEKTTSATSASQSTESSYAFFRSPLRRLQKV 169
Query: 301 TCLLVVFSMRLISV 260
TC VVFSMRLIS+
Sbjct: 168 TCRFVVFSMRLISI 127
Score = 21.7 bits (41), Expect(2) = 5e-022
Identities = 6/7 (85%), Positives = 6/7 (85%)
Frame = -3 / -3
Query: 125 CGWCSLL 105
CGWCS L
Sbjct: 49 CGWCSQL 29
>gb|BQ462769.1|BQ462769 HI01P04T HI Hordeum vulgare subsp. vulgare cDNA clone HI01P04
5-PRIME, mRNA sequence
Length = 512
Score = 119 bits (254), Expect(3) = 3e-040
Identities = 48/69 (69%), Positives = 59/69 (85%)
Frame = +3 / +3
Query: 579 LIGDSITTMSHKELKHLETRLDKALGKIRAKKNDVLCSEVEYMQRREMELQNDNLYLRSR 758
LIGD++ TMSH++LK LE RLDK LGKIRA+KN++L +E+EYMQRREMELQN+N YLR +
Sbjct: 3 LIGDTMATMSHRDLKQLEGRLDKGLGKIRARKNELLSAEIEYMQRREMELQNNNFYLREK 182
Query: 759 VDENERAQQ 785
V E ER QQ
Sbjct: 183 VAETERGQQ 209
Score = 105 bits (224), Expect(2) = 2e-028
Identities = 47/69 (68%), Positives = 51/69 (73%)
Frame = -1 / -2
Query: 784 CCALSFSSTRLLKYKLSFCNSISLLCMYSTSEHSTSFFFALIFPRALSNLVSKCLSSLWL 605
CC LS S+T LK KL FC+SISLLCMYS S S SFF ALIFPR LS+L S C SLWL
Sbjct: 208 CCPLSVSATFSLK*KLLFCSSISLLCMYSISALSNSFFLALIFPRPLSSLPSSCFRSLWL 29
Query: 604 MVVIESPIR 578
MV + SPIR
Sbjct: 28 MVAMVSPIR 2
Score = 85.4 bits (180), Expect(2) = 1e-021
Identities = 39/64 (60%), Positives = 45/64 (70%)
Frame = +1 / +1
Query: 601 P*ATRNLSTWRLG*TKLSERLEQKRTMCCVLKSSTCREGKWSCRMTTCT*GAGLMRMKGH 780
P*AT S+WR G TK ERLEQ+R LK STCREGKWSCR+TT T*G +R+KG
Sbjct: 25 P*ATET*SSWREGWTKA*ERLEQERMNY*ALKLSTCREGKWSCRITTST*GKKSLRLKGG 204
Query: 781 NRQR 792
N +R
Sbjct: 205 NSRR 216
Score = 84.9 bits (179), Expect(3) = 1e-021
Identities = 43/73 (58%), Positives = 49/73 (67%)
Frame = -3 / -1
Query: 800 HHVRCLLCPFILINPAP*VQVVILQLHFPSLHVLDFRTQHIVLFCSNLSESFV*PSLQVL 621
H R LL PF L + P V+VVILQLHFPSLHVL+F +L CSNLS +FV PSLQ+L
Sbjct: 224 HVQRLLLPPFSLSDFFPQVEVVILQLHFPSLHVLNFSA**FILSCSNLS*AFVQPSLQLL 45
Query: 620 KFLVAHGCDRITY 582
VAHG I Y
Sbjct: 44 *VSVAHGSHGIAY 6
Score = 54.7 bits (113), Expect(3) = 3e-040
Identities = 20/25 (80%), Positives = 24/25 (96%)
Frame = +3 / +3
Query: 858 RSFLQFNIVQQPQFYSQQEDRKDFN 932
R+FLQFNI+QQPQ+Y+QQEDRK FN
Sbjct: 282 RTFLQFNIMQQPQYYTQQEDRKTFN 356
Score = 41.4 bits (84), Expect(2) = 2e-028
Identities = 18/25 (72%), Positives = 19/25 (76%)
Frame = -1 / -2
Query: 931 LKSFRSSC*E*N*GCCTMLNCRKLL 857
LK F SSC * *GCC MLNCRK+L
Sbjct: 355 LKVFLSSCWV*Y*GCCMMLNCRKVL 281
Score = 38.6 bits (78), Expect(2) = 1e-021
Identities = 17/26 (65%), Positives = 20/26 (76%)
Frame = +2 / +2
Query: 854 NKELPAVQHRAAASVLFSAGGPERLQ 931
++ LPAVQH AAASVL AGG + LQ
Sbjct: 278 SENLPAVQHHAAASVLHPAGG*KNLQ 355
Score = 30.4 bits (60), Expect(3) = 3e-040
Identities = 13/25 (52%), Positives = 14/25 (56%)
Frame = +3 / +3
Query: 780 QQTANMMGAPSTSEYQQHGFTPYDP 854
QQT NMMGA STS + DP
Sbjct: 207 QQTLNMMGAASTSNEYEQNMIQCDP 281
Score = 28.6 bits (56), Expect(3) = 1e-021
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = -1 / -2
Query: 886 CTMLNCRKLLIGS*GVKPCC*YSLVDGAPIMFAVCC 779
C M+ + ++GS + C V+ APIMF VCC
Sbjct: 313 CCMMLNCRKVLGSHCIIFCSYSLDVEAAPIMFNVCC 206
Score = 28.1 bits (55), Expect(3) = 1e-021
Identities = 13/17 (76%), Positives = 13/17 (76%)
Frame = -2 / -3
Query: 915 PPAENRTEAAARC*TAG 865
PPA TEAAA C*TAG
Sbjct: 339 PPAGCSTEAAA*C*TAG 289
>gb|BG418810.1|BG418810 HVSMEk0024I17f Hordeum vulgare testa/pericarp EST library
HVcDNA0013 (normal) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEk0024I17f, mRNA sequence
Length = 862
Score = 113 bits (242), Expect(2) = 4e-038
Identities = 46/58 (79%), Positives = 53/58 (91%)
Frame = +3 / +2
Query: 249 GKGKTEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYAN 422
G+G+ E+KRIEN NRQVTF KRRNGLLKKAYELSVLCDAEVALIVFS+RG+LYE+ +
Sbjct: 65 GRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIVFSNRGKLYEFCS 238
Score = 65.2 bits (136), Expect(2) = 4e-038
Identities = 32/123 (26%), Positives = 63/123 (51%)
Frame = +3 / +2
Query: 507 IQHYKQESARLRQQIVNLQNSNRALIGDSITTMSHKELKHLETRLDKALGKIRAKKNDVL 686
+++ + E +L+ ++ NLQ + R L+G+ + ++ KEL+ LE +LD +L IR + +
Sbjct: 329 LKNSRNEYLKLKTRVDNLQRTQRNLLGEDLDSLGIKELESLEKQLDSSLKHIRTTRTQHM 508
Query: 687 CSEVEYMQRREMELQNDNLYLRSRVDENERAQQTANMMGAPSTSEYQQHGFTPYDPIRSF 866
++ +QRRE N LR +++E+ + +++ P T G D R+
Sbjct: 509 VDQLTELQRREQMFSEANKCLRIKLEESTQVMGSSSGSTTPRTEL*TSAGSAAADARRAM 688
Query: 867 LQF 875
F
Sbjct: 689 DSF 697
Database: Hordeum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:16 PM
Number of letters in database: 175,134,539
Number of sequences in database: 312,970
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 585,249,844
Number of Sequences: 312970
Number of extensions: 9321342
Number of successful extensions: 54736
Number of sequences better than 1.0e-020: 228
length of database: 58,378,179
effective HSP length: 53
effective length of database: 41,790,769
effective search space used: 16590935293
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)