TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2591258.2.1
(819 letters)
Database: Hordeum_nucl_with_EST.fasta
312,970 sequences; 175,134,539 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BF259495.2|BF259495 HVSMEf0019H19f Hordeum vulgare seedl... 177 4e-056
gb|BF064997.3|BF064997 HV_CEb0022G03f Hordeum vulgare seedl... 166 7e-055
gb|BF630744.2|BF630744 HVSMEb0013N02f Hordeum vulgare seedl... 173 1e-054
gb|BI957447.1|BI957447 HVSMEn0009J18f Hordeum vulgare rachi... 173 1e-054
gb|BI960118.1|BI960118 HVSMEn0023E18f Hordeum vulgare rachi... 177 1e-054
gb|BG300054.1|BG300054 HVSMEb0011D09f Hordeum vulgare seedl... 168 6e-053
gb|BJ466490.1|BJ466490 BJ466490 K. Sato unpublished cDNA li... 127 4e-052
gb|BQ762267.1|BQ762267 EBro01_SQ005_F11_R root, 3 week, hyd... 160 1e-049
gb|CB878369.1|CB878369 HP08E22T HP Hordeum vulgare subsp. v... 173 3e-049
gb|BF626523.2|BF626523 HVSMEa0018K06f Hordeum vulgare seedl... 144 2e-048
gb|BJ467041.1|BJ467041 BJ467041 K. Sato unpublished cDNA li... 170 3e-048
gb|BI958752.1|BI958752 HVSMEn0016H12f Hordeum vulgare rachi... 169 4e-048
gb|BI957613.1|BI957613 HVSMEn0010F23f Hordeum vulgare rachi... 137 1e-047
gb|BJ549094.1|BJ549094 BJ549094 K. Sato unpublished cDNA li... 152 6e-047
gb|BE519891.1|BE519891 HV_CEb0021J17f Hordeum vulgare seedl... 137 1e-046
gb|BI950057.1|BI950057 HVSMEl0018B24f Hordeum vulgare spike... 145 2e-046
gb|BF260414.3|BF260414 HVSMEf0021O22f Hordeum vulgare seedl... 123 3e-046
gb|CA017209.1|CA017209 HV14G11u HV Hordeum vulgare subsp. v... 123 3e-046
gb|BQ660910.1|BQ660910 HM01A23w HM Hordeum vulgare subsp. v... 123 3e-046
gb|BE559087.1|BE559087 HV_CEb0022L14f Hordeum vulgare seedl... 137 5e-046
gb|AL503249.1|AL503249 AL503249 Hordeum vulgare Barke roots... 137 5e-046
gb|BE216491.2|BE216491 HV_CEb0010K05f Hordeum vulgare seedl... 137 5e-046
gb|BM370604.2|BM370604 EBro08_SQ004_L13_R root, 3 week, dro... 136 9e-046
gb|BE519617.1|BE519617 HV_CEb0016H01f Hordeum vulgare seedl... 134 2e-045
gb|BF624054.2|BF624054 HVSMEa0009A08f Hordeum vulgare seedl... 134 3e-045
gb|BE214450.2|BE214450 HV_CEb0003H21f Hordeum vulgare seedl... 134 3e-045
gb|BI960166.1|BI960166 HVSMEn0023I06f Hordeum vulgare rachi... 134 3e-045
gb|BI779178.2|BI779178 EBro01_SQ003_D18_R root, 3 week, hyd... 146 6e-045
gb|BF065240.1|BF065240 HV_CEb0024I11f Hordeum vulgare seedl... 132 2e-044
gb|CA030887.1|CA030887 HX08G19r HX Hordeum vulgare subsp. v... 177 5e-044
gb|CA006913.1|CA006913 HU06B07r HU Hordeum vulgare subsp. v... 137 5e-044
gb|BF256079.2|BF256079 HVSMEf0008K20f Hordeum vulgare seedl... 99 8e-044
gb|CB859954.1|CB859954 HI12C04w HI Hordeum vulgare subsp. v... 177 1e-043
gb|BI960399.1|BI960399 HVSMEn0024H14f Hordeum vulgare rachi... 131 1e-043
gb|BF627066.2|BF627066 HVSMEb0002G16f Hordeum vulgare seedl... 98 1e-043
gb|BE216025.2|BE216025 HV_CEb0009C13f Hordeum vulgare seedl... 128 2e-043
gb|BF625981.2|BF625981 HVSMEa0015B13f Hordeum vulgare seedl... 127 4e-043
gb|BF259949.2|BF259949 HVSMEf0020L06f Hordeum vulgare seedl... 127 5e-043
gb|BI960325.1|BI960325 HVSMEn0024D19f Hordeum vulgare rachi... 174 6e-043
gb|BU979082.1|BU979082 HA15B18r HA Hordeum vulgare subsp. v... 174 6e-043
gb|BU979265.1|BU979265 HA15J22r HA Hordeum vulgare subsp. v... 174 6e-043
gb|CB859935.1|CB859935 HI12A22w HI Hordeum vulgare subsp. v... 174 6e-043
gb|BI956791.1|BI956791 HVSMEn0005F21f Hordeum vulgare rachi... 126 7e-043
gb|BI957710.1|BI957710 HVSMEn0010N01f Hordeum vulgare rachi... 126 9e-043
gb|BF261040.2|BF261040 HVSMEf0023J16f Hordeum vulgare seedl... 75 4e-042
gb|AL504625.1|AL504625 AL504625 Hordeum vulgare Barke roots... 122 1e-041
gb|BI960119.1|BI960119 HVSMEn0023E19f Hordeum vulgare rachi... 121 2e-041
gb|BG415448.2|BG415448 HVSMEk0006I14f Hordeum vulgare testa... 100 2e-041
gb|BI957460.1|BI957460 HVSMEn0009L10f Hordeum vulgare rachi... 121 3e-041
gb|BF630555.2|BF630555 HVSMEb0011I21f Hordeum vulgare seedl... 79 8e-041
gb|BI959367.1|BI959367 HVSMEn0019G08f Hordeum vulgare rachi... 118 2e-040
gb|CA007423.1|CA007423 HU07O17r HU Hordeum vulgare subsp. v... 106 2e-040
gb|BI959235.1|BI959235 HVSMEn0018M17f Hordeum vulgare rachi... 122 2e-040
gb|BJ468176.1|BJ468176 BJ468176 K. Sato unpublished cDNA li... 164 7e-040
gb|CA016838.1|CA016838 HV05N12u HV Hordeum vulgare subsp. v... 164 7e-040
gb|BE213939.2|BE213939 HV_CEb0001L07f Hordeum vulgare seedl... 162 2e-039
gb|BI958431.1|BI958431 HVSMEn0014O22f Hordeum vulgare rachi... 161 3e-039
gb|BI960120.1|BI960120 HVSMEn0023E20f Hordeum vulgare rachi... 88 6e-039
gb|BI959659.1|BI959659 HVSMEn0020K11f Hordeum vulgare rachi... 87 1e-038
gb|BU977235.1|BU977235 HA11B05r HA Hordeum vulgare subsp. v... 111 1e-038
gb|BQ460884.1|BQ460884 HE01O17r HE Hordeum vulgare subsp. v... 111 1e-038
gb|BF264389.2|BF264389 HV_CEa0009E18f Hordeum vulgare seedl... 106 2e-038
gb|BI959561.1|BI959561 HVSMEn0020D05f Hordeum vulgare rachi... 109 7e-038
gb|BU977318.1|BU977318 HA11D12u HA Hordeum vulgare subsp. v... 123 9e-038
gb|BF256995.2|BF256995 HVSMEf0011J05f Hordeum vulgare seedl... 116 6e-037
gb|CA020338.1|CA020338 HZ36A04r HZ Hordeum vulgare subsp. v... 101 2e-035
gb|BI960085.1|BI960085 HVSMEn0023C11f Hordeum vulgare rachi... 91 3e-035
gb|BG370011.2|BG370011 HVSMEi0026P07f Hordeum vulgare 20 DA... 114 5e-035
gb|CA021273.1|CA021273 HZ39J21r HZ Hordeum vulgare subsp. v... 100 5e-035
gb|BQ467961.1|BQ467961 HR01H17r HR Hordeum vulgare subsp. v... 100 5e-035
gb|BM371957.2|BM371957 EBma08_SQ004_I06_R maternal, 28 DPA,... 105 9e-035
gb|BI959395.1|BI959395 HVSMEn0019I06f Hordeum vulgare rachi... 97 9e-035
gb|BU998750.1|BU998750 HI12A22r HI Hordeum vulgare subsp. v... 103 6e-034
gb|BQ765794.1|BQ765794 EBro03_SQ008_N04_R root, 3 week, wat... 88 2e-033
gb|BJ464739.1|BJ464739 BJ464739 K. Sato unpublished cDNA li... 142 2e-033
gb|BI960535.1|BI960535 HVSMEn0024P05f Hordeum vulgare rachi... 100 4e-033
gb|BI957501.1|BI957501 HVSMEn0009O03f Hordeum vulgare rachi... 93 5e-033
gb|BI952091.1|BI952091 HVSMEm0004J09f Hordeum vulgare green... 74 3e-032
gb|BQ468365.1|BQ468365 HM01A23T HM Hordeum vulgare subsp. v... 59 3e-032
gb|CB880402.1|CB880402 HM06G24w HM Hordeum vulgare subsp. v... 73 3e-032
gb|AV929789.1|AV929789 AV929789 K. Sato unpublished cDNA li... 120 4e-032
gb|BM100502.2|BM100502 EBma01_SQ005_G14_R maternal, 4 DPA, ... 90 4e-032
gb|BI957746.1|BI957746 HVSMEn0010P24f Hordeum vulgare rachi... 90 6e-032
gb|BI958437.1|BI958437 HVSMEn0014P16f Hordeum vulgare rachi... 130 9e-032
gb|BF257218.2|BF257218 HVSMEf0012D15f Hordeum vulgare seedl... 136 2e-031
gb|BE558675.1|BE558675 HV_CEb0020A16f Hordeum vulgare seedl... 136 2e-031
gb|BG299397.1|BG299397 HVSMEa0019M12f Hordeum vulgare seedl... 74 5e-031
gb|BI779395.2|BI779395 EBro01_SQ003_O04_R root, 3 week, hyd... 86 7e-031
gb|BI957644.1|BI957644 HVSMEn0010H17f Hordeum vulgare rachi... 92 1e-030
gb|BQ471953.1|BQ471953 HV03P16r HV Hordeum vulgare subsp. v... 84 3e-030
gb|CB878414.1|CB878414 HP08H09T HP Hordeum vulgare subsp. v... 131 6e-030
gb|BQ661501.1|BQ661501 HM03L08u HM Hordeum vulgare subsp. v... 123 7e-030
gb|CA018785.1|CA018785 HV09K09r HV Hordeum vulgare subsp. v... 81 2e-029
gb|BU998774.1|BU998774 HI12C04r HI Hordeum vulgare subsp. v... 87 3e-029
gb|BF254858.3|BF254858 HVSMEf0005D24f Hordeum vulgare seedl... 125 3e-028
gb|BI958809.1|BI958809 HVSMEn0016L12f Hordeum vulgare rachi... 83 5e-028
gb|BI960531.1|BI960531 HVSMEn0024O24f Hordeum vulgare rachi... 83 5e-028
gb|AV924692.1|AV924692 AV924692 K. Sato unpublished cDNA li... 123 1e-027
gb|CB880406.1|CB880406 HM06H04w HM Hordeum vulgare subsp. v... 123 1e-027
gb|CA025276.1|CA025276 HZ51K20r HZ Hordeum vulgare subsp. v... 57 2e-027
gb|BU977317.1|BU977317 HA11D12r HA Hordeum vulgare subsp. v... 57 2e-027
gb|BF065160.1|BF065160 HV_CEb0023K10f Hordeum vulgare seedl... 73 3e-027
gb|CA016746.1|CA016746 HV06J09u HV Hordeum vulgare subsp. v... 121 5e-027
gb|BQ763567.1|BQ763567 EBro02_SQ008_E22_R root, 3 week, hyd... 121 6e-027
gb|BF629072.2|BF629072 HVSMEb0009M09f Hordeum vulgare seedl... 105 1e-026
gb|BI959396.1|BI959396 HVSMEn0019I08f Hordeum vulgare rachi... 104 2e-026
gb|CA001451.1|CA001451 HS17P10u HS Hordeum vulgare subsp. v... 118 3e-026
gb|BU994270.1|BU994270 HM06G24r HM Hordeum vulgare subsp. v... 73 4e-026
gb|BI960058.1|BI960058 HVSMEn0023A12f Hordeum vulgare rachi... 118 4e-026
gb|BF065682.1|BF065682 HV_CEb0013G02f Hordeum vulgare seedl... 68 1e-025
gb|BF619963.2|BF619963 HVSMEc0009N12f Hordeum vulgare seedl... 52 1e-025
gb|AW982228.3|AW982228 HVSMEg0002G09f Hordeum vulgare pre-a... 47 2e-025
gb|BF623901.2|BF623901 HVSMEa0007J15f Hordeum vulgare seedl... 73 4e-025
gb|CA019093.1|CA019093 HV10M04r HV Hordeum vulgare subsp. v... 66 6e-025
gb|BQ661977.1|BQ661977 HR01B07u HR Hordeum vulgare subsp. v... 112 3e-024
gb|BJ549697.1|BJ549697 BJ549697 K. Sato unpublished cDNA li... 110 1e-023
gb|BI956671.1|BI956671 HVSMEn0004L02f Hordeum vulgare rachi... 59 6e-023
gb|AV916275.1|AV916275 AV916275 K. Sato unpublished cDNA li... 68 3e-022
gb|AL450922.1|AL450922 AL450922 Hordeum vulgare Barke etiol... 44 1e-021
>gb|BF259495.2|BF259495 HVSMEf0019H19f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEf0019H19f, mRNA sequence
Length = 759
Score = 177 bits (382), Expect(3) = 4e-056
Identities = 71/128 (55%), Positives = 88/128 (68%)
Frame = -3 / +1
Query: 565 QIGSPVIEKAGVAHKIDFRVGLALPVLDQMVSEEGNKGKFDFAFVDADKVNFLNYHERLL 386
++G P IEKAGVAHKIDFR G ALPVLD ++ +E N G FDF FVDADK N+LNYHERL+
Sbjct: 214 ELGLPCIEKAGVAHKIDFREGPALPVLDALLEDEANHGTFDFVFVDADKDNYLNYHERLM 393
Query: 385 QLLRVGGLIAYDNTLWGGSVAAPHDEPLSEXXXXXXXXXXXXXXXXXADPRVHVCQVAIA 206
+L++VGGL+ YDNTLW GSV P D P+ + AD RV +CQ+ +
Sbjct: 394 KLVKVGGLLGYDNTLWNGSVVLPADAPMRKYIRYYRDFVLDLNKALAADQRVEICQLPVG 573
Query: 205 DGLXLCRR 182
DG+ LCRR
Sbjct: 574 DGITLCRR 597
Score = 95.0 bits (201), Expect(3) = 3e-030
Identities = 45/78 (57%), Positives = 50/78 (64%)
Frame = +3 / -2
Query: 327 TDPPHSVLS*AMRPPTLXXXXXXXW*LRKFTLSASTNAKSNLPLFPSSETIWSSTGSASP 506
T+P VLS* RPPTL W*LR +LSAST KS +P SS S TGSA P
Sbjct: 452 TEPFQRVLS*PRRPPTLTSFMRRSW*LR*LSLSASTKTKSKVPWLASSSRRASRTGSAGP 273
Query: 507 TRKSILCATPAFSITGDP 560
+RKSILCATPAFS+ G P
Sbjct: 272 SRKSILCATPAFSMHGSP 219
Score = 43.7 bits (89), Expect(3) = 3e-030
Identities = 19/35 (54%), Positives = 25/35 (71%)
Frame = +3 / -1
Query: 636 EQRVPGEDANLDGVLGAKNLDQELQQLHLVRRRSH 740
EQ V DA+L G+LGA L+Q +++L LVRRR H
Sbjct: 147 EQGVARVDADLHGLLGADELEQHVEELALVRRRRH 43
Score = 40.5 bits (82), Expect(3) = 4e-056
Identities = 14/22 (63%), Positives = 20/22 (90%)
Frame = -3 / +1
Query: 631 TALALPDDGKIVAIDVTRESYD 566
TALA+PDDG I+A+D+ RE+Y+
Sbjct: 151 TALAIPDDGTILAMDINRENYE 216
Score = 38.6 bits (78), Expect(3) = 4e-056
Identities = 18/47 (38%), Positives = 23/47 (48%)
Frame = -2 / +1
Query: 776 IRHEHRTHPMAGMAASPDXXXXXXXXXXXLGAKNAIEVGVFTGYSLL 636
+R HP M S D +GAK +E+GV+TGYSLL
Sbjct: 7 LREITANHPWNLMTTSADEGQFLNMLLKLIGAKKTMEIGVYTGYSLL 147
Score = 30.9 bits (61), Expect(3) = 3e-030
Identities = 15/28 (53%), Positives = 19/28 (67%)
Frame = +3 / -2
Query: 567 S*LSRVTSMATILPSSGRARAVNEQRVP 650
S* SR+ SMA ++PSSG A AV + P
Sbjct: 215 S*FSRLMSMAKMVPSSGMASAVASRE*P 132
>gb|BF064997.3|BF064997 HV_CEb0022G03f Hordeum vulgare seedling green leaf EST library
HVcDNA0005 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEb0022G03f, mRNA sequence
Length = 816
Score = 166 bits (358), Expect(3) = 7e-055
Identities = 66/129 (51%), Positives = 87/129 (67%)
Frame = -3 / +2
Query: 565 QIGSPVIEKAGVAHKIDFRVGLALPVLDQMVSEEGNKGKFDFAFVDADKVNFLNYHERLL 386
++G P IEKAG+AHK+DFR G L L+++++E+ +DFAFVDADK N++ YHE+LL
Sbjct: 386 EVGRPFIEKAGMAHKVDFREGTGLERLEELLAEDDGAASYDFAFVDADKPNYVRYHEQLL 565
Query: 385 QLLRVGGLIAYDNTLWGGSVAAPHDEPLSEXXXXXXXXXXXXXXXXXADPRVHVCQVAIA 206
+L+RVGG I YDNTLWGG+VA P LS+ DPR VCQ+AIA
Sbjct: 566 RLVRVGGTIIYDNTLWGGTVALPAGTXLSDLDTRFSAALRDLNAKARXDPRXEVCQLAIA 745
Query: 205 DGLXLCRRV 179
DG+ +CRRV
Sbjct: 746 DGVTICRRV 772
Score = 72.5 bits (152), Expect(4) = 1e-025
Identities = 40/78 (51%), Positives = 42/78 (53%)
Frame = +3 / -1
Query: 327 TDPPHSVLS*AMRPPTLXXXXXXXW*LRKFTLSASTNAKSNLPLFPSSETIWSSTGSASP 506
T PP SVLS* M PPT W* LSASTNAKS L SS S P
Sbjct: 624 TVPPQSVLS*MMVPPTRTSRSSCSW*RT*LGLSASTNAKS*LAAPSSSARSSSRRSRPVP 445
Query: 507 TRKSILCATPAFSITGDP 560
+RKS LCA PAFS+ G P
Sbjct: 444 SRKSTLCAMPAFSMKGRP 391
Score = 67.0 bits (140), Expect(4) = 2e-027
Identities = 36/81 (44%), Positives = 44/81 (54%)
Frame = +2 / -3
Query: 149 RGG*PVFFFCDAAAQREPVGDGDLADVNAGIGGHGRVELPGGRSERAVPLGERFVVGRGH 328
RG *P DAAA VGDG+LAD+ A + VE+P G E V +G+ + H
Sbjct: 802 RGP*PDARLDDAAADGNAVGDGELADLXARVXASFGVEVPEGGGEAGVEVGQXRARRQRH 623
Query: 329 GPAPQRVVVGDEAPDPEQLQQ 391
AP+RVVV D A D Q QQ
Sbjct: 622 RAAPERVVVDDGAADAHQPQQ 560
Score = 46.4 bits (95), Expect(4) = 2e-027
Identities = 23/47 (48%), Positives = 28/47 (59%)
Frame = +3 / -3
Query: 615 GRARAVNEQRVPGEDANLDGVLGAKNLDQELQQLHLVRRRSHARHGV 755
G + +QRV E A+LD +LG +LDQ QQL LVR R H GV
Sbjct: 340 GERQRGGQQRVAREHAHLDRLLGPCHLDQHPQQLRLVRGRLHVTPGV 200
Score = 43.7 bits (89), Expect(3) = 7e-055
Identities = 20/40 (50%), Positives = 21/40 (52%)
Frame = -2 / +2
Query: 755 HPMAGMAASPDXXXXXXXXXXXLGAKNAIEVGVFTGYSLL 636
HP M +S D GAK IEVGVFTGYSLL
Sbjct: 200 HPWGYMQSSSDEAQLLGMLIKMAGAKKTIEVGVFTGYSLL 319
Score = 42.3 bits (86), Expect(3) = 7e-055
Identities = 17/22 (77%), Positives = 19/22 (86%)
Frame = -3 / +2
Query: 631 TALALPDDGKIVAIDVTRESYD 566
TALALP+DGKIVAID RE Y+
Sbjct: 323 TALALPEDGKIVAIDTDRECYE 388
Score = 38.6 bits (78), Expect(4) = 2e-027
Identities = 20/40 (50%), Positives = 23/40 (57%)
Frame = +2 / -3
Query: 464 LLGNHLVQHGQREPDAEVDLVRHAGLLDHRRPNLVVALAG 583
+LG L+Q Q AEV LVRHAGLLD +LV G
Sbjct: 487 VLGEELLQALQAGALAEVHLVRHAGLLDEGAAHLVALTVG 368
Score = 33.6 bits (67), Expect(4) = 1e-025
Identities = 18/28 (64%), Positives = 18/28 (64%)
Frame = +3 / -1
Query: 567 S*LSRVTSMATILPSSGRARAVNEQRVP 650
S* SR SMATILPSSG A AV P
Sbjct: 387 S*HSRSVSMATILPSSGSASAVASSE*P 304
Score = 33.1 bits (66), Expect(4) = 1e-025
Identities = 13/20 (65%), Positives = 15/20 (75%)
Frame = +3 / -1
Query: 180 TRRHSXSPSAMATWQT*TRG 239
TRR +PSAMA+WQT RG
Sbjct: 771 TRRQMVTPSAMASWQTSMRG 712
Score = 31.8 bits (63), Expect(4) = 1e-025
Identities = 13/17 (76%), Positives = 14/17 (82%)
Frame = +1 / -1
Query: 637 SSEYPVKTPTSMAFLAP 687
SSE PV TPTS+ FLAP
Sbjct: 318 SSE*PVNTPTSIVFLAP 268
Score = 24.9 bits (48), Expect(4) = 2e-027
Identities = 10/16 (62%), Positives = 13/16 (81%)
Frame = +2 / -3
Query: 566 VVALAGNVDGHNLAVV 613
+VAL VDGH+LAV+
Sbjct: 388 LVALTVGVDGHDLAVL 341
>gb|BF630744.2|BF630744 HVSMEb0013N02f Hordeum vulgare seedling shoot EST library
HVcDNA0002 (Dehydration stress) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEb0013N02f, mRNA sequence
Length = 756
Score = 173 bits (372), Expect(3) = 1e-054
Identities = 68/129 (52%), Positives = 90/129 (69%)
Frame = -3 / +2
Query: 565 QIGSPVIEKAGVAHKIDFRVGLALPVLDQMVSEEGNKGKFDFAFVDADKVNFLNYHERLL 386
++G P IEKAG+AHK+DFR G L L+++++E+ +DFAFVDADK N++ YHE+LL
Sbjct: 164 EVGRPFIEKAGMAHKVDFREGTGLERLEELLAEDDGAASYDFAFVDADKPNYVRYHEQLL 343
Query: 385 QLLRVGGLIAYDNTLWGGSVAAPHDEPLSEXXXXXXXXXXXXXXXXXADPRVHVCQVAIA 206
+L+RVGG I YDNTLWGG+VA P PLS+ ADPR+ VCQ+AIA
Sbjct: 344 RLVRVGGTIIYDNTLWGGTVALPAGTPLSDLDTRFSAALRDLNAKLAADPRIEVCQLAIA 523
Query: 205 DGLXLCRRV 179
DG+ +CRRV
Sbjct: 524 DGVTICRRV 550
Score = 72.5 bits (152), Expect(4) = 3e-025
Identities = 40/78 (51%), Positives = 42/78 (53%)
Frame = +3 / -1
Query: 327 TDPPHSVLS*AMRPPTLXXXXXXXW*LRKFTLSASTNAKSNLPLFPSSETIWSSTGSASP 506
T PP SVLS* M PPT W* LSASTNAKS L SS S P
Sbjct: 402 TVPPQSVLS*MMVPPTRTSRSSCSW*RT*LGLSASTNAKS*LAAPSSSARSSSRRSRPVP 223
Query: 507 TRKSILCATPAFSITGDP 560
+RKS LCA PAFS+ G P
Sbjct: 222 SRKSTLCAMPAFSMKGRP 169
Score = 71.6 bits (150), Expect(4) = 6e-027
Identities = 34/71 (47%), Positives = 44/71 (61%)
Frame = +2 / -3
Query: 179 DAAAQREPVGDGDLADVNAGIGGHGRVELPGGRSERAVPLGERFVVGRGHGPAPQRVVVG 358
DAAA + VGDG+LAD++A +GG VE+P G E V +G+ + H AP+RVVV
Sbjct: 550 DAAADGDAVGDGELADLDARVGGELGVEVPEGGGEAGVEVGQGRARRQRHRAAPERVVVD 371
Query: 359 DEAPDPEQLQQ 391
D A D Q QQ
Sbjct: 370 DGAADAHQPQQ 338
Score = 42.3 bits (86), Expect(3) = 1e-054
Identities = 17/22 (77%), Positives = 19/22 (86%)
Frame = -3 / +2
Query: 631 TALALPDDGKIVAIDVTRESYD 566
TALALP+DGKIVAID RE Y+
Sbjct: 101 TALALPEDGKIVAIDTDRECYE 166
Score = 39.1 bits (79), Expect(4) = 3e-025
Identities = 19/38 (50%), Positives = 24/38 (63%)
Frame = +3 / -3
Query: 615 GRARAVNEQRVPGEDANLDGVLGAKNLDQELQQLHLVR 728
G + +QRV E A+LD +LG +LDQ QQL LVR
Sbjct: 118 GERQRGGQQRVAREHAHLDRLLGPCHLDQHPQQLRLVR 5
Score = 38.6 bits (78), Expect(4) = 6e-027
Identities = 20/40 (50%), Positives = 23/40 (57%)
Frame = +2 / -3
Query: 464 LLGNHLVQHGQREPDAEVDLVRHAGLLDHRRPNLVVALAG 583
+LG L+Q Q AEV LVRHAGLLD +LV G
Sbjct: 265 VLGEELLQALQAGALAEVHLVRHAGLLDEGAAHLVALTVG 146
Score = 36.8 bits (74), Expect(3) = 1e-054
Identities = 15/17 (88%), Positives = 15/17 (88%)
Frame = -2 / +2
Query: 686 GAKNAIEVGVFTGYSLL 636
GAK IEVGVFTGYSLL
Sbjct: 47 GAKKTIEVGVFTGYSLL 97
Score = 33.6 bits (67), Expect(4) = 6e-027
Identities = 18/28 (64%), Positives = 18/28 (64%)
Frame = +3 / -1
Query: 567 S*LSRVTSMATILPSSGRARAVNEQRVP 650
S* SR SMATILPSSG A AV P
Sbjct: 165 S*HSRSVSMATILPSSGSASAVASSE*P 82
Score = 33.1 bits (66), Expect(4) = 3e-025
Identities = 13/20 (65%), Positives = 15/20 (75%)
Frame = +3 / -1
Query: 180 TRRHSXSPSAMATWQT*TRG 239
TRR +PSAMA+WQT RG
Sbjct: 549 TRRQMVTPSAMASWQTSMRG 490
Score = 31.8 bits (63), Expect(4) = 6e-027
Identities = 13/17 (76%), Positives = 14/17 (82%)
Frame = +1 / -1
Query: 637 SSEYPVKTPTSMAFLAP 687
SSE PV TPTS+ FLAP
Sbjct: 96 SSE*PVNTPTSIVFLAP 46
Score = 24.9 bits (48), Expect(4) = 3e-025
Identities = 10/16 (62%), Positives = 13/16 (81%)
Frame = +2 / -3
Query: 566 VVALAGNVDGHNLAVV 613
+VAL VDGH+LAV+
Sbjct: 166 LVALTVGVDGHDLAVL 119
>gb|BI957447.1|BI957447 HVSMEn0009J18f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0009J18f, mRNA sequence
Length = 667
Score = 173 bits (372), Expect(3) = 1e-054
Identities = 68/129 (52%), Positives = 90/129 (69%)
Frame = -3 / +1
Query: 565 QIGSPVIEKAGVAHKIDFRVGLALPVLDQMVSEEGNKGKFDFAFVDADKVNFLNYHERLL 386
++G P IEKAG+AHK+DFR G L L+++++E+ +DFAFVDADK N++ YHE+LL
Sbjct: 157 EVGRPFIEKAGMAHKVDFREGTGLERLEELLAEDDGAASYDFAFVDADKPNYVRYHEQLL 336
Query: 385 QLLRVGGLIAYDNTLWGGSVAAPHDEPLSEXXXXXXXXXXXXXXXXXADPRVHVCQVAIA 206
+L+RVGG I YDNTLWGG+VA P PLS+ ADPR+ VCQ+AIA
Sbjct: 337 RLVRVGGTIIYDNTLWGGTVALPAGTPLSDLDTRFSAALRDLNAKLAADPRIEVCQLAIA 516
Query: 205 DGLXLCRRV 179
DG+ +CRRV
Sbjct: 517 DGVTICRRV 543
Score = 72.5 bits (152), Expect(4) = 5e-024
Identities = 40/78 (51%), Positives = 42/78 (53%)
Frame = +3 / -3
Query: 327 TDPPHSVLS*AMRPPTLXXXXXXXW*LRKFTLSASTNAKSNLPLFPSSETIWSSTGSASP 506
T PP SVLS* M PPT W* LSASTNAKS L SS S P
Sbjct: 395 TVPPQSVLS*MMVPPTRTSRSSCSW*RT*LGLSASTNAKS*LAAPSSSARSSSRRSRPVP 216
Query: 507 TRKSILCATPAFSITGDP 560
+RKS LCA PAFS+ G P
Sbjct: 215 SRKSTLCAMPAFSMKGRP 162
Score = 71.6 bits (150), Expect(4) = 6e-027
Identities = 34/71 (47%), Positives = 44/71 (61%)
Frame = +2 / -2
Query: 179 DAAAQREPVGDGDLADVNAGIGGHGRVELPGGRSERAVPLGERFVVGRGHGPAPQRVVVG 358
DAAA + VGDG+LAD++A +GG VE+P G E V +G+ + H AP+RVVV
Sbjct: 543 DAAADGDAVGDGELADLDARVGGELGVEVPEGGGEAGVEVGQGRARRQRHRAAPERVVVD 364
Query: 359 DEAPDPEQLQQ 391
D A D Q QQ
Sbjct: 363 DGAADAHQPQQ 331
Score = 42.3 bits (86), Expect(3) = 1e-054
Identities = 17/22 (77%), Positives = 19/22 (86%)
Frame = -3 / +1
Query: 631 TALALPDDGKIVAIDVTRESYD 566
TALALP+DGKIVAID RE Y+
Sbjct: 94 TALALPEDGKIVAIDTDRECYE 159
Score = 38.6 bits (78), Expect(4) = 6e-027
Identities = 20/40 (50%), Positives = 23/40 (57%)
Frame = +2 / -2
Query: 464 LLGNHLVQHGQREPDAEVDLVRHAGLLDHRRPNLVVALAG 583
+LG L+Q Q AEV LVRHAGLLD +LV G
Sbjct: 258 VLGEELLQALQAGALAEVHLVRHAGLLDEGAAHLVALTVG 139
Score = 36.8 bits (74), Expect(3) = 1e-054
Identities = 15/17 (88%), Positives = 15/17 (88%)
Frame = -2 / +1
Query: 686 GAKNAIEVGVFTGYSLL 636
GAK IEVGVFTGYSLL
Sbjct: 40 GAKKTIEVGVFTGYSLL 90
Score = 35.0 bits (70), Expect(4) = 5e-024
Identities = 17/36 (47%), Positives = 22/36 (61%)
Frame = +3 / -2
Query: 615 GRARAVNEQRVPGEDANLDGVLGAKNLDQELQQLHL 722
G + +QRV E A+LD +LG +LDQ QQL L
Sbjct: 111 GERQRGGQQRVAREHAHLDRLLGPCHLDQHPQQLRL 4
Score = 33.6 bits (67), Expect(4) = 6e-027
Identities = 18/28 (64%), Positives = 18/28 (64%)
Frame = +3 / -3
Query: 567 S*LSRVTSMATILPSSGRARAVNEQRVP 650
S* SR SMATILPSSG A AV P
Sbjct: 158 S*HSRSVSMATILPSSGSASAVASSE*P 75
Score = 33.1 bits (66), Expect(4) = 5e-024
Identities = 13/20 (65%), Positives = 15/20 (75%)
Frame = +3 / -3
Query: 180 TRRHSXSPSAMATWQT*TRG 239
TRR +PSAMA+WQT RG
Sbjct: 542 TRRQMVTPSAMASWQTSMRG 483
Score = 31.8 bits (63), Expect(4) = 6e-027
Identities = 13/17 (76%), Positives = 14/17 (82%)
Frame = +1 / -3
Query: 637 SSEYPVKTPTSMAFLAP 687
SSE PV TPTS+ FLAP
Sbjct: 89 SSE*PVNTPTSIVFLAP 39
Score = 24.9 bits (48), Expect(4) = 5e-024
Identities = 10/16 (62%), Positives = 13/16 (81%)
Frame = +2 / -2
Query: 566 VVALAGNVDGHNLAVV 613
+VAL VDGH+LAV+
Sbjct: 159 LVALTVGVDGHDLAVL 112
>gb|BI960118.1|BI960118 HVSMEn0023E18f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0023E18f, mRNA sequence
Length = 637
Score = 177 bits (382), Expect(3) = 1e-054
Identities = 71/128 (55%), Positives = 88/128 (68%)
Frame = -3 / +2
Query: 565 QIGSPVIEKAGVAHKIDFRVGLALPVLDQMVSEEGNKGKFDFAFVDADKVNFLNYHERLL 386
++G P IEKAGVAHKIDFR G ALPVLD ++ +E N G FDF FVDADK N+LNYHERL+
Sbjct: 152 ELGLPCIEKAGVAHKIDFREGPALPVLDALLEDEANHGTFDFVFVDADKDNYLNYHERLM 331
Query: 385 QLLRVGGLIAYDNTLWGGSVAAPHDEPLSEXXXXXXXXXXXXXXXXXADPRVHVCQVAIA 206
+L++VGGL+ YDNTLW GSV P D P+ + AD RV +CQ+ +
Sbjct: 332 KLVKVGGLLGYDNTLWNGSVVLPADAPMRKYIRYYRDFVLDLNKALAADQRVEICQLPVG 511
Query: 205 DGLXLCRR 182
DG+ LCRR
Sbjct: 512 DGITLCRR 535
Score = 95.0 bits (201), Expect(2) = 2e-022
Identities = 45/78 (57%), Positives = 50/78 (64%)
Frame = +3 / -2
Query: 327 TDPPHSVLS*AMRPPTLXXXXXXXW*LRKFTLSASTNAKSNLPLFPSSETIWSSTGSASP 506
T+P VLS* RPPTL W*LR +LSAST KS +P SS S TGSA P
Sbjct: 390 TEPFQRVLS*PRRPPTLTSFMRRSW*LR*LSLSASTKTKSKVPWLASSSRRASRTGSAGP 211
Query: 507 TRKSILCATPAFSITGDP 560
+RKSILCATPAFS+ G P
Sbjct: 210 SRKSILCATPAFSMHGSP 157
Score = 40.5 bits (82), Expect(3) = 1e-054
Identities = 14/22 (63%), Positives = 20/22 (90%)
Frame = -3 / +2
Query: 631 TALALPDDGKIVAIDVTRESYD 566
TALA+PDDG I+A+D+ RE+Y+
Sbjct: 89 TALAIPDDGTILAMDINRENYE 154
Score = 33.6 bits (67), Expect(3) = 1e-054
Identities = 12/17 (70%), Positives = 15/17 (88%)
Frame = -2 / +2
Query: 686 GAKNAIEVGVFTGYSLL 636
GAK +E+GV+TGYSLL
Sbjct: 35 GAKKTMEIGVYTGYSLL 85
Score = 30.9 bits (61), Expect(2) = 2e-022
Identities = 15/28 (53%), Positives = 19/28 (67%)
Frame = +3 / -2
Query: 567 S*LSRVTSMATILPSSGRARAVNEQRVP 650
S* SR+ SMA ++PSSG A AV + P
Sbjct: 153 S*FSRLMSMAKMVPSSGMASAVASRE*P 70
>gb|BG300054.1|BG300054 HVSMEb0011D09f Hordeum vulgare seedling shoot EST library
HVcDNA0002 (Dehydration stress) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEb0011D09f, mRNA sequence
Length = 518
Score = 168 bits (361), Expect(3) = 6e-053
Identities = 67/128 (52%), Positives = 88/128 (68%)
Frame = -3 / +1
Query: 562 IGSPVIEKAGVAHKIDFRVGLALPVLDQMVSEEGNKGKFDFAFVDADKVNFLNYHERLLQ 383
+G P IEKAG+AHK+DFR G L L+++++E+ +DFAFVDADK N++ YHE+LL+
Sbjct: 127 VGRPFIEKAGMAHKVDFREGTGLERLEELLAEDDGAASYDFAFVDADKPNYVRYHEQLLR 306
Query: 382 LLRVGGLIAYDNTLWGGSVAAPHDEPLSEXXXXXXXXXXXXXXXXXADPRVHVCQVAIAD 203
L+RVGG I YDNTLWGG+VA P PLS+ ADPR+ VCQ+AIAD
Sbjct: 307 LVRVGGTIIYDNTLWGGTVALPAGTPLSDLDTRFSAALRDLNAKLAADPRIEVCQLAIAD 486
Query: 202 GLXLCRRV 179
+ +CRRV
Sbjct: 487 CVTICRRV 510
Score = 71.6 bits (150), Expect(4) = 1e-026
Identities = 34/71 (47%), Positives = 44/71 (61%)
Frame = +2 / -3
Query: 179 DAAAQREPVGDGDLADVNAGIGGHGRVELPGGRSERAVPLGERFVVGRGHGPAPQRVVVG 358
DAAA + VGDG+LAD++A +GG VE+P G E V +G+ + H AP+RVVV
Sbjct: 510 DAAADGDAVGDGELADLDARVGGELGVEVPEGGGEAGVEVGQGRARRQRHRAAPERVVVD 331
Query: 359 DEAPDPEQLQQ 391
D A D Q QQ
Sbjct: 330 DGAADAHQPQQ 298
Score = 41.4 bits (84), Expect(3) = 6e-053
Identities = 17/21 (80%), Positives = 18/21 (85%)
Frame = -3 / +1
Query: 631 TALALPDDGKIVAIDVTRESY 569
TALALP+DGKIVAID RE Y
Sbjct: 61 TALALPEDGKIVAIDTDRECY 123
Score = 38.6 bits (78), Expect(4) = 1e-026
Identities = 20/40 (50%), Positives = 23/40 (57%)
Frame = +2 / -3
Query: 464 LLGNHLVQHGQREPDAEVDLVRHAGLLDHRRPNLVVALAG 583
+LG L+Q Q AEV LVRHAGLLD +LV G
Sbjct: 225 VLGEELLQALQAGALAEVHLVRHAGLLDEGAAHLVALTVG 106
Score = 36.8 bits (74), Expect(3) = 6e-053
Identities = 15/17 (88%), Positives = 15/17 (88%)
Frame = -2 / +1
Query: 686 GAKNAIEVGVFTGYSLL 636
GAK IEVGVFTGYSLL
Sbjct: 7 GAKKTIEVGVFTGYSLL 57
Score = 32.7 bits (65), Expect(4) = 1e-026
Identities = 16/25 (64%), Positives = 16/25 (64%)
Frame = +3 / -1
Query: 576 SRVTSMATILPSSGRARAVNEQRVP 650
SR SMATILPSSG A AV P
Sbjct: 116 SRSVSMATILPSSGSASAVASSE*P 42
Score = 31.8 bits (63), Expect(4) = 1e-026
Identities = 13/17 (76%), Positives = 14/17 (82%)
Frame = +1 / -1
Query: 637 SSEYPVKTPTSMAFLAP 687
SSE PV TPTS+ FLAP
Sbjct: 56 SSE*PVNTPTSIVFLAP 6
>gb|BJ466490.1|BJ466490 BJ466490 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags32g18 3', mRNA sequence
Length = 646
Score = 127 bits (271), Expect(4) = 4e-052
Identities = 55/109 (50%), Positives = 70/109 (64%)
Frame = -3 / -3
Query: 460 NKGKFDFAFVDADKVNFLNYHERLLQLLRVGGLIAYDNTLWGGSVAAPHDEPLSEXXXXX 281
++G FDFAFVDADK N+ +YHE+LL+L+RVGG++AYDNTLWGG+V+ P D PL+E
Sbjct: 329 DEGSFDFAFVDADKYNYGSYHEQLLRLVRVGGVLAYDNTLWGGTVSMPDDTPLTEEDRKK 150
Query: 280 XXXXXXXXXXXXADPRVHVCQVAIADGLXLCRRVAKKKYRLSASKCSRA 134
AD RV Q+ IADG+ LCRRV R A+ RA
Sbjct: 149 RDSIRGFNAMIAADARVEPVQLPIADGITLCRRVVYSHDRPCAAASGRA 3
Score = 79.4 bits (167), Expect(4) = 2e-032
Identities = 39/77 (50%), Positives = 48/77 (62%)
Frame = +2 / +3
Query: 161 PVFFFCDAAAQREPVGDGDLADVNAGIGGHGRVELPGGRSERAVPLGERFVVGRGHGPAP 340
PV DAAA+R+ VGD +L ++A +GG VE P G AV L ER VVG GH AP
Sbjct: 30 PVMRINDAAAERDTVGDRELHGLHARVGGDHGVEPPDGVPFLAVLLRERRVVGHGHSAAP 209
Query: 341 QRVVVGDEAPDPEQLQQ 391
+RVVVG+ A D + QQ
Sbjct: 210 ERVVVGEHAADAHEPQQ 260
Score = 56.5 bits (117), Expect(4) = 4e-052
Identities = 21/36 (58%), Positives = 30/36 (83%)
Frame = -3 / -3
Query: 571 YDQIGSPVIEKAGVAHKIDFRVGLALPVLDQMVSEE 464
Y +G PVI+KAGVAHK+DFR G A P+LD+++++E
Sbjct: 437 YFDLGLPVIKKAGVAHKVDFREGPAGPILDKLIADE 330
Score = 43.7 bits (89), Expect(4) = 4e-052
Identities = 16/22 (72%), Positives = 21/22 (95%)
Frame = -3 / -3
Query: 631 TALALPDDGKIVAIDVTRESYD 566
TALA+PDDG+I+AIDV+RE +D
Sbjct: 494 TALAIPDDGRIIAIDVSREYFD 429
Score = 43.2 bits (88), Expect(4) = 2e-032
Identities = 19/32 (59%), Positives = 21/32 (65%)
Frame = +3 / +1
Query: 465 SSETIWSSTGSASPTRKSILCATPAFSITGDP 560
SS S G A P+RKS LCATPAF +TG P
Sbjct: 331 SSAMSLSRMGPAGPSRKSTLCATPAFLMTGRP 426
Score = 41.8 bits (85), Expect(4) = 2e-032
Identities = 18/30 (60%), Positives = 22/30 (73%)
Frame = +3 / +3
Query: 651 GEDANLDGVLGAKNLDQELQQLHLVRRRSH 740
G D +LDG LGA +L+Q+ QQ LVRRR H
Sbjct: 513 GVDPHLDGPLGAHHLEQQRQQQPLVRRRRH 602
Score = 34.5 bits (69), Expect(4) = 4e-052
Identities = 16/40 (40%), Positives = 21/40 (52%)
Frame = -2 / -3
Query: 755 HPMAGMAASPDXXXXXXXXXXXLGAKNAIEVGVFTGYSLL 636
H M++ PD +GAK IEVGV+TG S+L
Sbjct: 617 HIFGFMSSPPDEGLLLSLLLKVMGAKRTIEVGVYTGCSVL 498
Score = 30.4 bits (60), Expect(4) = 2e-032
Identities = 15/25 (60%), Positives = 16/25 (64%)
Frame = +3 / +1
Query: 576 SRVTSMATILPSSGRARAVNEQRVP 650
S +TSMA ILPSSG A AV P
Sbjct: 439 SLLTSMAMILPSSGMASAVVRTEQP 513
>gb|BQ762267.1|BQ762267 EBro01_SQ005_F11_R root, 3 week, hydroponic grown, no treatment, cv
Optic, EBro01 Hordeum vulgare subsp. vulgare cDNA clone
EBro01_SQ005_F11 5', mRNA sequence
Length = 664
Score = 160 bits (345), Expect(3) = 1e-049
Identities = 65/119 (54%), Positives = 81/119 (68%)
Frame = -3 / +3
Query: 565 QIGSPVIEKAGVAHKIDFRVGLALPVLDQMVSEEGNKGKFDFAFVDADKVNFLNYHERLL 386
++G P IEKAGVAHKIDFR G ALPVLD ++ +E N G FDF FVDADK N+LNYHERL+
Sbjct: 159 ELGLPCIEKAGVAHKIDFREGPALPVLDALLEDEANHGTFDFVFVDADKDNYLNYHERLM 338
Query: 385 QLLRVGGLIAYDNTLWGGSVAAPHDEPLSEXXXXXXXXXXXXXXXXXADPRVHVCQVAI 209
+L++VGGL+ YDNTLW GSV P D P+ + AD RV +CQ+ +
Sbjct: 339 KLVKVGGLLGYDNTLWNGSVVLPADAPMRKYIRYYRDFVLDLNKALAADQRVEICQLPV 515
Score = 95.0 bits (201), Expect(2) = 2e-022
Identities = 45/78 (57%), Positives = 50/78 (64%)
Frame = +3 / -1
Query: 327 TDPPHSVLS*AMRPPTLXXXXXXXW*LRKFTLSASTNAKSNLPLFPSSETIWSSTGSASP 506
T+P VLS* RPPTL W*LR +LSAST KS +P SS S TGSA P
Sbjct: 397 TEPFQRVLS*PRRPPTLTSFMRRSW*LR*LSLSASTKTKSKVPWLASSSRRASRTGSAGP 218
Query: 507 TRKSILCATPAFSITGDP 560
+RKSILCATPAFS+ G P
Sbjct: 217 SRKSILCATPAFSMHGSP 164
Score = 40.5 bits (82), Expect(3) = 1e-049
Identities = 14/22 (63%), Positives = 20/22 (90%)
Frame = -3 / +3
Query: 631 TALALPDDGKIVAIDVTRESYD 566
TALA+PDDG I+A+D+ RE+Y+
Sbjct: 96 TALAIPDDGTILAMDINRENYE 161
Score = 33.6 bits (67), Expect(3) = 1e-049
Identities = 12/17 (70%), Positives = 15/17 (88%)
Frame = -2 / +3
Query: 686 GAKNAIEVGVFTGYSLL 636
GAK +E+GV+TGYSLL
Sbjct: 42 GAKKTMEIGVYTGYSLL 92
Score = 30.9 bits (61), Expect(2) = 2e-022
Identities = 15/28 (53%), Positives = 19/28 (67%)
Frame = +3 / -1
Query: 567 S*LSRVTSMATILPSSGRARAVNEQRVP 650
S* SR+ SMA ++PSSG A AV + P
Sbjct: 160 S*FSRLMSMAKMVPSSGMASAVASRE*P 77
>gb|CB878369.1|CB878369 HP08E22T HP Hordeum vulgare subsp. vulgare cDNA clone HP08E22
5-PRIME, mRNA sequence
Length = 581
Score = 173 bits (372), Expect(2) = 3e-049
Identities = 68/129 (52%), Positives = 90/129 (69%)
Frame = -3 / +2
Query: 565 QIGSPVIEKAGVAHKIDFRVGLALPVLDQMVSEEGNKGKFDFAFVDADKVNFLNYHERLL 386
++G P IEKAG+AHK+DFR G L L+++++E+ +DFAFVDADK N++ YHE+LL
Sbjct: 149 EVGRPFIEKAGMAHKVDFREGTGLERLEELLAEDDGAASYDFAFVDADKPNYVRYHEQLL 328
Query: 385 QLLRVGGLIAYDNTLWGGSVAAPHDEPLSEXXXXXXXXXXXXXXXXXADPRVHVCQVAIA 206
+L+RVGG I YDNTLWGG+VA P PLS+ ADPR+ VCQ+AIA
Sbjct: 329 RLVRVGGTIIYDNTLWGGTVALPAGTPLSDLDTRFSAALRDLNAKLAADPRIEVCQLAIA 508
Query: 205 DGLXLCRRV 179
DG+ +CRRV
Sbjct: 509 DGVTICRRV 535
Score = 71.6 bits (150), Expect(4) = 3e-024
Identities = 34/71 (47%), Positives = 44/71 (61%)
Frame = +2 / -2
Query: 179 DAAAQREPVGDGDLADVNAGIGGHGRVELPGGRSERAVPLGERFVVGRGHGPAPQRVVVG 358
DAAA + VGDG+LAD++A +GG VE+P G E V +G+ + H AP+RVVV
Sbjct: 535 DAAADGDAVGDGELADLDARVGGELGVEVPEGGGEAGVEVGQGRARRQRHRAAPERVVVD 356
Query: 359 DEAPDPEQLQQ 391
D A D Q QQ
Sbjct: 355 DGAADAHQPQQ 323
Score = 42.3 bits (86), Expect(2) = 3e-049
Identities = 17/22 (77%), Positives = 19/22 (86%)
Frame = -3 / +2
Query: 631 TALALPDDGKIVAIDVTRESYD 566
TALALP+DGKIVAID RE Y+
Sbjct: 86 TALALPEDGKIVAIDTDRECYE 151
Score = 38.6 bits (78), Expect(4) = 3e-024
Identities = 20/40 (50%), Positives = 23/40 (57%)
Frame = +2 / -2
Query: 464 LLGNHLVQHGQREPDAEVDLVRHAGLLDHRRPNLVVALAG 583
+LG L+Q Q AEV LVRHAGLLD +LV G
Sbjct: 250 VLGEELLQALQAGALAEVHLVRHAGLLDEGAAHLVALTVG 131
Score = 33.6 bits (67), Expect(4) = 3e-024
Identities = 18/28 (64%), Positives = 18/28 (64%)
Frame = +3 / -3
Query: 567 S*LSRVTSMATILPSSGRARAVNEQRVP 650
S* SR SMATILPSSG A AV P
Sbjct: 150 S*HSRSVSMATILPSSGSASAVASSE*P 67
Score = 22.6 bits (43), Expect(4) = 3e-024
Identities = 8/10 (80%), Positives = 9/10 (90%)
Frame = +1 / -2
Query: 658 TPTSMAFLAP 687
TPTS+ FLAP
Sbjct: 61 TPTSIVFLAP 32
>gb|BF626523.2|BF626523 HVSMEa0018K06f Hordeum vulgare seedling shoot EST library
HVcDNA0001 (Cold stress) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEa0018K06f, mRNA sequence
Length = 749
Score = 144 bits (310), Expect(3) = 2e-048
Identities = 58/117 (49%), Positives = 78/117 (66%)
Frame = -3 / +3
Query: 565 QIGSPVIEKAGVAHKIDFRVGLALPVLDQMVSEEGNKGKFDFAFVDADKVNFLNYHERLL 386
++G P IEKAG+AHK+DFR G L L+++++E+ +DFAFVDADK N++ YHE+LL
Sbjct: 399 EVGRPFIEKAGMAHKVDFREGTGLERLEELLAEDDGAASYDFAFVDADKPNYVRYHEQLL 578
Query: 385 QLLRVGGLIAYDNTLWGGSVAAPHDEPLSEXXXXXXXXXXXXXXXXXADPRVHVCQV 215
+L+RVGG I YDNTLWGG+VA P PLS+ ADP + VCQ+
Sbjct: 579 RLVRVGGTIIYDNTLWGGTVALPAGTPLSDLDTRFFAGLRDLNAKLAADPCMEVCQL 749
Score = 72.5 bits (152), Expect(3) = 1e-022
Identities = 40/78 (51%), Positives = 42/78 (53%)
Frame = +3 / -2
Query: 327 TDPPHSVLS*AMRPPTLXXXXXXXW*LRKFTLSASTNAKSNLPLFPSSETIWSSTGSASP 506
T PP SVLS* M PPT W* LSASTNAKS L SS S P
Sbjct: 637 TVPPQSVLS*MMVPPTRTSRSSCSW*RT*LGLSASTNAKS*LAAPSSSARSSSRRSRPVP 458
Query: 507 TRKSILCATPAFSITGDP 560
+RKS LCA PAFS+ G P
Sbjct: 457 SRKSTLCAMPAFSMKGRP 404
Score = 46.4 bits (95), Expect(3) = 1e-022
Identities = 23/47 (48%), Positives = 28/47 (59%)
Frame = +3 / -1
Query: 615 GRARAVNEQRVPGEDANLDGVLGAKNLDQELQQLHLVRRRSHARHGV 755
G + +QRV E A+LD +LG +LDQ QQL LVR R H GV
Sbjct: 353 GERQRGGQQRVAREHAHLDRLLGPCHLDQHPQQLRLVRGRLHVTPGV 213
Score = 43.7 bits (89), Expect(3) = 2e-048
Identities = 20/40 (50%), Positives = 21/40 (52%)
Frame = -2 / +3
Query: 755 HPMAGMAASPDXXXXXXXXXXXLGAKNAIEVGVFTGYSLL 636
HP M +S D GAK IEVGVFTGYSLL
Sbjct: 213 HPWGYMQSSSDEAQLLGMLIKMAGAKKTIEVGVFTGYSLL 332
Score = 42.3 bits (86), Expect(3) = 2e-048
Identities = 17/22 (77%), Positives = 19/22 (86%)
Frame = -3 / +3
Query: 631 TALALPDDGKIVAIDVTRESYD 566
TALALP+DGKIVAID RE Y+
Sbjct: 336 TALALPEDGKIVAIDTDRECYE 401
Score = 24.9 bits (48), Expect(3) = 1e-022
Identities = 10/16 (62%), Positives = 13/16 (81%)
Frame = +2 / -1
Query: 566 VVALAGNVDGHNLAVV 613
+VAL VDGH+LAV+
Sbjct: 401 LVALTVGVDGHDLAVL 354
>gb|BJ467041.1|BJ467041 BJ467041 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags35l16 3', mRNA sequence
Length = 705
Score = 170 bits (365), Expect(2) = 3e-048
Identities = 67/129 (51%), Positives = 89/129 (68%)
Frame = -3 / -3
Query: 565 QIGSPVIEKAGVAHKIDFRVGLALPVLDQMVSEEGNKGKFDFAFVDADKVNFLNYHERLL 386
++ P IEKAG+AHK+DFR G L L+++++E+ +DFAFVDADK N++ YHE+LL
Sbjct: 625 EVXRPFIEKAGMAHKVDFREGTGLERLEELLAEDDGAASYDFAFVDADKPNYVRYHEQLL 446
Query: 385 QLLRVGGLIAYDNTLWGGSVAAPHDEPLSEXXXXXXXXXXXXXXXXXADPRVHVCQVAIA 206
+L+RVGG I YDNTLWGG+VA P PLS+ ADPR+ VCQ+AIA
Sbjct: 445 RLVRVGGTIIYDNTLWGGTVALPAGTPLSDLDTRFSAALRDLNAKLAADPRIEVCQLAIA 266
Query: 205 DGLXLCRRV 179
DG+ +CRRV
Sbjct: 265 DGVTICRRV 239
Score = 71.6 bits (150), Expect(3) = 2e-022
Identities = 34/71 (47%), Positives = 44/71 (61%)
Frame = +2 / +2
Query: 179 DAAAQREPVGDGDLADVNAGIGGHGRVELPGGRSERAVPLGERFVVGRGHGPAPQRVVVG 358
DAAA + VGDG+LAD++A +GG VE+P G E V +G+ + H AP+RVVV
Sbjct: 239 DAAADGDAVGDGELADLDARVGGELGVEVPEGGGEAGVEVGQGRARRQRHRAAPERVVVD 418
Query: 359 DEAPDPEQLQQ 391
D A D Q QQ
Sbjct: 419 DGAADAHQPQQ 451
Score = 42.3 bits (86), Expect(2) = 3e-048
Identities = 17/22 (77%), Positives = 19/22 (86%)
Frame = -3 / -3
Query: 631 TALALPDDGKIVAIDVTRESYD 566
TALALP+DGKIVAID RE Y+
Sbjct: 688 TALALPEDGKIVAIDTDRECYE 623
Score = 38.2 bits (77), Expect(3) = 2e-022
Identities = 20/40 (50%), Positives = 23/40 (57%)
Frame = +2 / +2
Query: 464 LLGNHLVQHGQREPDAEVDLVRHAGLLDHRRPNLVVALAG 583
+LG L+Q Q AEV LVRHAGLLD +LV G
Sbjct: 524 VLGEELLQALQAGALAEVHLVRHAGLLDEGAXHLVALTVG 643
Score = 33.1 bits (66), Expect(3) = 2e-022
Identities = 17/22 (77%), Positives = 17/22 (77%)
Frame = +3 / +3
Query: 567 S*LSRVTSMATILPSSGRARAV 632
S* SR SMATILPSSG A AV
Sbjct: 624 S*HSRSVSMATILPSSGSASAV 689
>gb|BI958752.1|BI958752 HVSMEn0016H12f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0016H12f, mRNA sequence
Length = 676
Score = 169 bits (364), Expect(2) = 4e-048
Identities = 67/129 (51%), Positives = 89/129 (68%)
Frame = -3 / +2
Query: 565 QIGSPVIEKAGVAHKIDFRVGLALPVLDQMVSEEGNKGKFDFAFVDADKVNFLNYHERLL 386
++G P IEKAG+AHK+DFR G L L+++++E+ +DFAFVDADK N++ YHE+LL
Sbjct: 83 EVGRPFIEKAGMAHKVDFREGTGLERLEELLAEDDGAASYDFAFVDADKPNYVRYHEQLL 262
Query: 385 QLLRVGGLIAYDNTLWGGSVAAPHDEPLSEXXXXXXXXXXXXXXXXXADPRVHVCQVAIA 206
+L+RVGG I YDNTLWGG+VA P PLS+ ADPR+ VCQ+AIA
Sbjct: 263 RLVRVGGTIIYDNTLWGGTVALPAGTPLSDLDTRFSAALRDLNAKLAADPRIEVCQLAIA 442
Query: 205 DGLXLCRRV 179
D + +CRRV
Sbjct: 443 DRVTICRRV 469
Score = 69.3 bits (145), Expect(3) = 7e-022
Identities = 33/71 (46%), Positives = 43/71 (60%)
Frame = +2 / -1
Query: 179 DAAAQREPVGDGDLADVNAGIGGHGRVELPGGRSERAVPLGERFVVGRGHGPAPQRVVVG 358
DA A + VGDG+LAD++A +GG VE+P G E V +G+ + H AP+RVVV
Sbjct: 469 DAPADGDAVGDGELADLDARVGGELGVEVPEGGGEAGVEVGQGRARRQRHRAAPERVVVD 290
Query: 359 DEAPDPEQLQQ 391
D A D Q QQ
Sbjct: 289 DGAADAHQPQQ 257
Score = 42.3 bits (86), Expect(2) = 4e-048
Identities = 17/22 (77%), Positives = 19/22 (86%)
Frame = -3 / +2
Query: 631 TALALPDDGKIVAIDVTRESYD 566
TALALP+DGKIVAID RE Y+
Sbjct: 20 TALALPEDGKIVAIDTDRECYE 85
Score = 38.6 bits (78), Expect(3) = 7e-022
Identities = 20/40 (50%), Positives = 23/40 (57%)
Frame = +2 / -1
Query: 464 LLGNHLVQHGQREPDAEVDLVRHAGLLDHRRPNLVVALAG 583
+LG L+Q Q AEV LVRHAGLLD +LV G
Sbjct: 184 VLGEELLQALQAGALAEVHLVRHAGLLDEGAAHLVALTVG 65
Score = 33.1 bits (66), Expect(3) = 7e-022
Identities = 17/22 (77%), Positives = 17/22 (77%)
Frame = +3 / -2
Query: 567 S*LSRVTSMATILPSSGRARAV 632
S* SR SMATILPSSG A AV
Sbjct: 84 S*HSRSVSMATILPSSGSASAV 19
>gb|BI957613.1|BI957613 HVSMEn0010F23f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0010F23f, mRNA sequence
Length = 654
Score = 137 bits (293), Expect(4) = 1e-047
Identities = 55/112 (49%), Positives = 73/112 (65%)
Frame = -3 / +3
Query: 565 QIGSPVIEKAGVAHKIDFRVGLALPVLDQMVSEEGNKGKFDFAFVDADKVNFLNYHERLL 386
++G P IEKAG+AH DFR G L L+++++E+ +DFAFVDADK N++ YHE+LL
Sbjct: 195 EVGRPFIEKAGMAHTADFREGTGLERLEELLAEDDGAASYDFAFVDADKPNYVRYHEQLL 374
Query: 385 QLLRVGGLIAYDNTLWGGSVAAPHDEPLSEXXXXXXXXXXXXXXXXXADPRV 230
+L+RVGG I YDNTLWGG+VA P PLS+ ADPR+
Sbjct: 375 RLVRVGGTIIYDNTLWGGTVALPAGTPLSDLDTRFSAALRDLNAKLAADPRI 530
Score = 71.2 bits (149), Expect(4) = 4e-021
Identities = 39/78 (50%), Positives = 42/78 (53%)
Frame = +3 / -3
Query: 327 TDPPHSVLS*AMRPPTLXXXXXXXW*LRKFTLSASTNAKSNLPLFPSSETIWSSTGSASP 506
T PP SVLS* M PPT W* LSASTNAKS L SS S P
Sbjct: 433 TVPPQSVLS*MMVPPTRTSRSSCSW*RT*LGLSASTNAKS*LAAPSSSARSSSRRSRPVP 254
Query: 507 TRKSILCATPAFSITGDP 560
+RKS +CA PAFS+ G P
Sbjct: 253 SRKSAVCAMPAFSMKGRP 200
Score = 44.6 bits (91), Expect(4) = 1e-047
Identities = 21/40 (52%), Positives = 23/40 (57%)
Frame = -2 / +3
Query: 755 HPMAGMAASPDXXXXXXXXXXXLGAKNAIEVGVFTGYSLL 636
HP G+ + D GAK IEVGVFTGYSLL
Sbjct: 9 HPWGGIXGASDXAXLLGMLIKMAGAKKTIEVGVFTGYSLL 128
Score = 38.6 bits (78), Expect(4) = 1e-047
Identities = 16/22 (72%), Positives = 18/22 (81%)
Frame = -3 / +3
Query: 631 TALALPDDGKIVAIDVTRESYD 566
TALALP+DGKIVAID E Y+
Sbjct: 132 TALALPEDGKIVAIDAGGECYE 197
Score = 31.8 bits (63), Expect(4) = 4e-021
Identities = 13/17 (76%), Positives = 14/17 (82%)
Frame = +1 / -3
Query: 637 SSEYPVKTPTSMAFLAP 687
SSE PV TPTS+ FLAP
Sbjct: 127 SSE*PVNTPTSIVFLAP 77
Score = 30.4 bits (60), Expect(4) = 4e-021
Identities = 17/28 (60%), Positives = 17/28 (60%)
Frame = +3 / -3
Query: 567 S*LSRVTSMATILPSSGRARAVNEQRVP 650
S* S SMATILPSSG A AV P
Sbjct: 196 S*HSPPASMATILPSSGSASAVASSE*P 113
Score = 25.8 bits (50), Expect(4) = 1e-047
Identities = 10/14 (71%), Positives = 11/14 (78%)
Frame = -1 / +2
Query: 225 SARSPSPTGSRCAA 184
SA PSPTGS C+A
Sbjct: 536 SATLPSPTGSPCSA 577
Score = 22.1 bits (42), Expect(4) = 4e-021
Identities = 8/14 (57%), Positives = 10/14 (71%)
Frame = +2 / -1
Query: 185 AAQREPVGDGDLAD 226
A +PVGDG +AD
Sbjct: 576 AEHGDPVGDGKVAD 535
>gb|BJ549094.1|BJ549094 BJ549094 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags28c08 5', mRNA sequence
Length = 509
Score = 152 bits (326), Expect(3) = 6e-047
Identities = 59/88 (67%), Positives = 71/88 (80%)
Frame = -3 / +3
Query: 565 QIGSPVIEKAGVAHKIDFRVGLALPVLDQMVSEEGNKGKFDFAFVDADKVNFLNYHERLL 386
++G P IEKAGVAHKIDFR G ALPVLD ++ +E N G FDF FVDADK N+LNYHERL+
Sbjct: 171 ELGLPCIEKAGVAHKIDFREGPALPVLDALLEDEANHGTFDFVFVDADKDNYLNYHERLM 350
Query: 385 QLLRVGGLIAYDNTLWGGSVAAPHDEPL 302
+L++VGGL+ YDNTLW GSV P D P+
Sbjct: 351 KLVKVGGLLGYDNTLWNGSVVLPADAPM 434
Score = 95.0 bits (201), Expect(3) = 3e-029
Identities = 45/78 (57%), Positives = 50/78 (64%)
Frame = +3 / -2
Query: 327 TDPPHSVLS*AMRPPTLXXXXXXXW*LRKFTLSASTNAKSNLPLFPSSETIWSSTGSASP 506
T+P VLS* RPPTL W*LR +LSAST KS +P SS S TGSA P
Sbjct: 409 TEPFQRVLS*PRRPPTLTSFMRRSW*LR*LSLSASTKTKSKVPWLASSSRRASRTGSAGP 230
Query: 507 TRKSILCATPAFSITGDP 560
+RKSILCATPAFS+ G P
Sbjct: 229 SRKSILCATPAFSMHGSP 176
Score = 40.5 bits (82), Expect(3) = 3e-029
Identities = 18/33 (54%), Positives = 24/33 (72%)
Frame = +3 / -1
Query: 636 EQRVPGEDANLDGVLGAKNLDQELQQLHLVRRR 734
EQ V DA+L G+LGA L+Q +++L LVRRR
Sbjct: 104 EQGVARVDADLHGLLGADELEQHVEELALVRRR 6
Score = 40.5 bits (82), Expect(3) = 6e-047
Identities = 14/22 (63%), Positives = 20/22 (90%)
Frame = -3 / +3
Query: 631 TALALPDDGKIVAIDVTRESYD 566
TALA+PDDG I+A+D+ RE+Y+
Sbjct: 108 TALAIPDDGTILAMDINRENYE 173
Score = 33.6 bits (67), Expect(3) = 6e-047
Identities = 12/17 (70%), Positives = 15/17 (88%)
Frame = -2 / +3
Query: 686 GAKNAIEVGVFTGYSLL 636
GAK +E+GV+TGYSLL
Sbjct: 54 GAKKTMEIGVYTGYSLL 104
Score = 30.9 bits (61), Expect(3) = 3e-029
Identities = 15/28 (53%), Positives = 19/28 (67%)
Frame = +3 / -2
Query: 567 S*LSRVTSMATILPSSGRARAVNEQRVP 650
S* SR+ SMA ++PSSG A AV + P
Sbjct: 172 S*FSRLMSMAKMVPSSGMASAVASRE*P 89
>gb|BE519891.1|BE519891 HV_CEb0021J17f Hordeum vulgare seedling green leaf EST library
HVcDNA0005 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEb0021J17f, mRNA sequence
Length = 714
Score = 137 bits (293), Expect(4) = 1e-046
Identities = 52/90 (57%), Positives = 70/90 (77%)
Frame = -3 / +1
Query: 565 QIGSPVIEKAGVAHKIDFRVGLALPVLDQMVSEEGNKGKFDFAFVDADKVNFLNYHERLL 386
++G P IEKAG+AHK+DFR G L L+++++E+ +DFAFVDADK N++ YHE+LL
Sbjct: 433 EVGRPFIEKAGMAHKVDFREGTGLERLEELLAEDDGAASYDFAFVDADKPNYVRYHEQLL 612
Query: 385 QLLRVGGLIAYDNTLWGGSVAAPHDEPLSE 296
+L+RVGG I YDNTLWGG+VA P PLS+
Sbjct: 613 RLVRVGGTIIYDNTLWGGTVALPAGTPLSD 702
Score = 72.5 bits (152), Expect(3) = 1e-022
Identities = 40/78 (51%), Positives = 42/78 (53%)
Frame = +3 / -2
Query: 327 TDPPHSVLS*AMRPPTLXXXXXXXW*LRKFTLSASTNAKSNLPLFPSSETIWSSTGSASP 506
T PP SVLS* M PPT W* LSASTNAKS L SS S P
Sbjct: 671 TVPPQSVLS*MMVPPTRTSRSSCSW*RT*LGLSASTNAKS*LAAPSSSARSSSRRSRPVP 492
Query: 507 TRKSILCATPAFSITGDP 560
+RKS LCA PAFS+ G P
Sbjct: 491 SRKSTLCAMPAFSMKGRP 438
Score = 46.4 bits (95), Expect(3) = 1e-022
Identities = 23/47 (48%), Positives = 28/47 (59%)
Frame = +3 / -1
Query: 615 GRARAVNEQRVPGEDANLDGVLGAKNLDQELQQLHLVRRRSHARHGV 755
G + +QRV E A+LD +LG +LDQ QQL LVR R H GV
Sbjct: 387 GERQRGGQQRVAREHAHLDRLLGPCHLDQHPQQLRLVRGRLHVTPGV 247
Score = 43.7 bits (89), Expect(4) = 1e-046
Identities = 20/40 (50%), Positives = 21/40 (52%)
Frame = -2 / +1
Query: 755 HPMAGMAASPDXXXXXXXXXXXLGAKNAIEVGVFTGYSLL 636
HP M +S D GAK IEVGVFTGYSLL
Sbjct: 247 HPWGYMQSSSDEAQLLGMLIKMAGAKKTIEVGVFTGYSLL 366
Score = 42.3 bits (86), Expect(4) = 1e-046
Identities = 17/22 (77%), Positives = 19/22 (86%)
Frame = -3 / +1
Query: 631 TALALPDDGKIVAIDVTRESYD 566
TALALP+DGKIVAID RE Y+
Sbjct: 370 TALALPEDGKIVAIDTDRECYE 435
Score = 24.9 bits (48), Expect(3) = 1e-022
Identities = 10/16 (62%), Positives = 13/16 (81%)
Frame = +2 / -1
Query: 566 VVALAGNVDGHNLAVV 613
+VAL VDGH+LAV+
Sbjct: 435 LVALTVGVDGHDLAVL 388
Score = 23.5 bits (45), Expect(4) = 1e-046
Identities = 7/8 (87%), Positives = 8/8 (100%)
Frame = -2 / +2
Query: 785 ACRIRHEH 762
+CRIRHEH
Sbjct: 2 SCRIRHEH 25
>gb|BI950057.1|BI950057 HVSMEl0018B24f Hordeum vulgare spike EST library HVcDNA0012
(Fusarium infected) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEl0018B24f, mRNA sequence
Length = 880
Score = 145 bits (311), Expect(3) = 2e-046
Identities = 57/87 (65%), Positives = 68/87 (78%)
Frame = -3 / +3
Query: 565 QIGSPVIEKAGVAHKIDFRVGLALPVLDQMVSEEGNKGKFDFAFVDADKVNFLNYHERLL 386
++G P IEKAGVAHKIDFR G ALPVLD ++ +E N G FDF FVDADK N+LNYHERL+
Sbjct: 597 ELGLPCIEKAGVAHKIDFREGPALPVLDALLEDEANHGTFDFVFVDADKDNYLNYHERLM 776
Query: 385 QLLRVGGLIAYDNTLWGGSVAAPHDEP 305
+L++VGGL+ YDNTLW G AP P
Sbjct: 777 KLVKVGGLLGYDNTLWNGXRXAPPRRP 857
Score = 89.0 bits (188), Expect(3) = 2e-028
Identities = 44/76 (57%), Positives = 48/76 (63%)
Frame = +3 / -1
Query: 333 PPHSVLS*AMRPPTLXXXXXXXW*LRKFTLSASTNAKSNLPLFPSSETIWSSTGSASPTR 512
P VLS* RPPTL W* R +LSAST KS +P SS S TGSA P+R
Sbjct: 829 PFXRVLS*PRRPPTLTSFXRRSW*XR*LSLSASTKTKSKVPWLASSSRRASRTGSAGPSR 650
Query: 513 KSILCATPAFSITGDP 560
KSILCATPAFS+ G P
Sbjct: 649 KSILCATPAFSMHGSP 602
Score = 43.7 bits (89), Expect(3) = 2e-028
Identities = 19/35 (54%), Positives = 25/35 (71%)
Frame = +3 / -3
Query: 636 EQRVPGEDANLDGVLGAKNLDQELQQLHLVRRRSH 740
EQ V DA+L G+LGA L+Q +++L LVRRR H
Sbjct: 530 EQGVARVDADLHGLLGADELEQHVEELALVRRRRH 426
Score = 40.5 bits (82), Expect(3) = 2e-046
Identities = 14/22 (63%), Positives = 20/22 (90%)
Frame = -3 / +3
Query: 631 TALALPDDGKIVAIDVTRESYD 566
TALA+PDDG I+A+D+ RE+Y+
Sbjct: 534 TALAIPDDGTILAMDINRENYE 599
Score = 38.6 bits (78), Expect(3) = 2e-046
Identities = 18/47 (38%), Positives = 23/47 (48%)
Frame = -2 / +3
Query: 776 IRHEHRTHPMAGMAASPDXXXXXXXXXXXLGAKNAIEVGVFTGYSLL 636
+R HP M S D +GAK +E+GV+TGYSLL
Sbjct: 390 LREITANHPWNLMTTSADEGQFLNMLLKLIGAKKTMEIGVYTGYSLL 530
Score = 30.9 bits (61), Expect(3) = 2e-028
Identities = 15/28 (53%), Positives = 19/28 (67%)
Frame = +3 / -1
Query: 567 S*LSRVTSMATILPSSGRARAVNEQRVP 650
S* SR+ SMA ++PSSG A AV + P
Sbjct: 598 S*FSRLMSMAKMVPSSGMASAVASRE*P 515
>gb|BF260414.3|BF260414 HVSMEf0021O22f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEf0021O22f, mRNA sequence
Length = 650
Score = 123 bits (264), Expect(3) = 3e-046
Identities = 51/94 (54%), Positives = 65/94 (69%)
Frame = -3 / +2
Query: 460 NKGKFDFAFVDADKVNFLNYHERLLQLLRVGGLIAYDNTLWGGSVAAPHDEPLSEXXXXX 281
++G FDFAFVDADK N+ +YHE+LL+L+RVGG++AYDNTLWGG+V+ P D PL+E
Sbjct: 194 DEGSFDFAFVDADKYNYGSYHEQLLRLVRVGGVLAYDNTLWGGTVSMPDDTPLTEEDRKK 373
Query: 280 XXXXXXXXXXXXADPRVHVCQVAIADGLXLCRRV 179
AD RV Q+ IADG+ LCRRV
Sbjct: 374 RDSIRGFNAMIAADARVEPVQLPIADGITLCRRV 475
Score = 77.1 bits (162), Expect(3) = 1e-024
Identities = 37/71 (52%), Positives = 46/71 (64%)
Frame = +2 / -2
Query: 179 DAAAQREPVGDGDLADVNAGIGGHGRVELPGGRSERAVPLGERFVVGRGHGPAPQRVVVG 358
DAAA+R+ VGD +L ++A +GG VE P G AV L ER VVG GH AP+RVVVG
Sbjct: 475 DAAAERDTVGDRELHGLHARVGGDHGVEPPDGVPFLAVLLRERRVVGHGHSAAPERVVVG 296
Query: 359 DEAPDPEQLQQ 391
+ A D + QQ
Sbjct: 295 EHAADAHEPQQ 263
Score = 56.5 bits (117), Expect(3) = 3e-046
Identities = 21/36 (58%), Positives = 30/36 (83%)
Frame = -3 / +2
Query: 571 YDQIGSPVIEKAGVAHKIDFRVGLALPVLDQMVSEE 464
Y +G PVI+KAGVAHK+DFR G A P+LD+++++E
Sbjct: 86 YFDLGLPVIKKAGVAHKVDFREGPAGPILDKLIADE 193
Score = 43.7 bits (89), Expect(3) = 3e-046
Identities = 16/22 (72%), Positives = 21/22 (95%)
Frame = -3 / +2
Query: 631 TALALPDDGKIVAIDVTRESYD 566
TALA+PDDG+I+AIDV+RE +D
Sbjct: 29 TALAIPDDGRIIAIDVSREYFD 94
Score = 43.2 bits (88), Expect(3) = 1e-024
Identities = 19/32 (59%), Positives = 21/32 (65%)
Frame = +3 / -3
Query: 465 SSETIWSSTGSASPTRKSILCATPAFSITGDP 560
SS S G A P+RKS LCATPAF +TG P
Sbjct: 192 SSAMSLSRMGPAGPSRKSTLCATPAFLMTGRP 97
Score = 30.4 bits (60), Expect(3) = 1e-024
Identities = 15/25 (60%), Positives = 16/25 (64%)
Frame = +3 / -3
Query: 576 SRVTSMATILPSSGRARAVNEQRVP 650
S +TSMA ILPSSG A AV P
Sbjct: 84 SLLTSMAMILPSSGMASAVVRTEQP 10
>gb|CA017209.1|CA017209 HV14G11u HV Hordeum vulgare subsp. vulgare cDNA clone HV14G11
3-PRIME, mRNA sequence
Length = 552
Score = 123 bits (264), Expect(3) = 3e-046
Identities = 51/94 (54%), Positives = 65/94 (69%)
Frame = -3 / -2
Query: 460 NKGKFDFAFVDADKVNFLNYHERLLQLLRVGGLIAYDNTLWGGSVAAPHDEPLSEXXXXX 281
++G FDFAFVDADK N+ +YHE+LL+L+RVGG++AYDNTLWGG+V+ P D PL+E
Sbjct: 374 DEGSFDFAFVDADKYNYGSYHEQLLRLVRVGGVLAYDNTLWGGTVSMPDDTPLTEEDRKK 195
Query: 280 XXXXXXXXXXXXADPRVHVCQVAIADGLXLCRRV 179
AD RV Q+ IADG+ LCRRV
Sbjct: 194 RDSIRGFNAMIAADARVEPVQLPIADGITLCRRV 93
Score = 77.1 bits (162), Expect(3) = 2e-024
Identities = 37/71 (52%), Positives = 46/71 (64%)
Frame = +2 / +3
Query: 179 DAAAQREPVGDGDLADVNAGIGGHGRVELPGGRSERAVPLGERFVVGRGHGPAPQRVVVG 358
DAAA+R+ VGD +L ++A +GG VE P G AV L ER VVG GH AP+RVVVG
Sbjct: 93 DAAAERDTVGDRELHGLHARVGGDHGVEPPDGVPFLAVLLRERRVVGHGHSAAPERVVVG 272
Query: 359 DEAPDPEQLQQ 391
+ A D + QQ
Sbjct: 273 EHAADAHEPQQ 305
Score = 56.5 bits (117), Expect(3) = 3e-046
Identities = 21/36 (58%), Positives = 30/36 (83%)
Frame = -3 / -2
Query: 571 YDQIGSPVIEKAGVAHKIDFRVGLALPVLDQMVSEE 464
Y +G PVI+KAGVAHK+DFR G A P+LD+++++E
Sbjct: 482 YFDLGLPVIKKAGVAHKVDFREGPAGPILDKLIADE 375
Score = 43.7 bits (89), Expect(3) = 3e-046
Identities = 16/22 (72%), Positives = 21/22 (95%)
Frame = -3 / -2
Query: 631 TALALPDDGKIVAIDVTRESYD 566
TALA+PDDG+I+AIDV+RE +D
Sbjct: 539 TALAIPDDGRIIAIDVSREYFD 474
Score = 43.2 bits (88), Expect(3) = 2e-024
Identities = 19/32 (59%), Positives = 21/32 (65%)
Frame = +3 / +1
Query: 465 SSETIWSSTGSASPTRKSILCATPAFSITGDP 560
SS S G A P+RKS LCATPAF +TG P
Sbjct: 376 SSAMSLSRMGPAGPSRKSTLCATPAFLMTGRP 471
Score = 29.9 bits (59), Expect(3) = 2e-024
Identities = 14/19 (73%), Positives = 15/19 (78%)
Frame = +3 / +1
Query: 576 SRVTSMATILPSSGRARAV 632
S +TSMA ILPSSG A AV
Sbjct: 484 SLLTSMAMILPSSGMASAV 540
>gb|BQ660910.1|BQ660910 HM01A23w HM Hordeum vulgare subsp. vulgare cDNA clone HM01A23
3-PRIME, mRNA sequence
Length = 543
Score = 123 bits (264), Expect(3) = 3e-046
Identities = 51/94 (54%), Positives = 65/94 (69%)
Frame = -3 / -2
Query: 460 NKGKFDFAFVDADKVNFLNYHERLLQLLRVGGLIAYDNTLWGGSVAAPHDEPLSEXXXXX 281
++G FDFAFVDADK N+ +YHE+LL+L+RVGG++AYDNTLWGG+V+ P D PL+E
Sbjct: 377 DEGSFDFAFVDADKYNYGSYHEQLLRLVRVGGVLAYDNTLWGGTVSMPDDTPLTEEDRKK 198
Query: 280 XXXXXXXXXXXXADPRVHVCQVAIADGLXLCRRV 179
AD RV Q+ IADG+ LCRRV
Sbjct: 197 RDSIRGFNAMIAADARVEPVQLPIADGITLCRRV 96
Score = 77.1 bits (162), Expect(3) = 2e-024
Identities = 37/71 (52%), Positives = 46/71 (64%)
Frame = +2 / +3
Query: 179 DAAAQREPVGDGDLADVNAGIGGHGRVELPGGRSERAVPLGERFVVGRGHGPAPQRVVVG 358
DAAA+R+ VGD +L ++A +GG VE P G AV L ER VVG GH AP+RVVVG
Sbjct: 96 DAAAERDTVGDRELHGLHARVGGDHGVEPPDGVPFLAVLLRERRVVGHGHSAAPERVVVG 275
Query: 359 DEAPDPEQLQQ 391
+ A D + QQ
Sbjct: 276 EHAADAHEPQQ 308
Score = 56.5 bits (117), Expect(3) = 3e-046
Identities = 21/36 (58%), Positives = 30/36 (83%)
Frame = -3 / -2
Query: 571 YDQIGSPVIEKAGVAHKIDFRVGLALPVLDQMVSEE 464
Y +G PVI+KAGVAHK+DFR G A P+LD+++++E
Sbjct: 485 YFDLGLPVIKKAGVAHKVDFREGPAGPILDKLIADE 378
Score = 43.7 bits (89), Expect(3) = 3e-046
Identities = 16/22 (72%), Positives = 21/22 (95%)
Frame = -3 / -2
Query: 631 TALALPDDGKIVAIDVTRESYD 566
TALA+PDDG+I+AIDV+RE +D
Sbjct: 542 TALAIPDDGRIIAIDVSREYFD 477
Score = 43.2 bits (88), Expect(3) = 2e-024
Identities = 19/32 (59%), Positives = 21/32 (65%)
Frame = +3 / +1
Query: 465 SSETIWSSTGSASPTRKSILCATPAFSITGDP 560
SS S G A P+RKS LCATPAF +TG P
Sbjct: 379 SSAMSLSRMGPAGPSRKSTLCATPAFLMTGRP 474
Score = 29.9 bits (59), Expect(3) = 2e-024
Identities = 14/19 (73%), Positives = 15/19 (78%)
Frame = +3 / +1
Query: 576 SRVTSMATILPSSGRARAV 632
S +TSMA ILPSSG A AV
Sbjct: 487 SLLTSMAMILPSSGMASAV 543
>gb|BE559087.1|BE559087 HV_CEb0022L14f Hordeum vulgare seedling green leaf EST library
HVcDNA0005 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEb0022L14f, mRNA sequence
Length = 737
Score = 137 bits (293), Expect(3) = 5e-046
Identities = 52/90 (57%), Positives = 70/90 (77%)
Frame = -3 / +3
Query: 565 QIGSPVIEKAGVAHKIDFRVGLALPVLDQMVSEEGNKGKFDFAFVDADKVNFLNYHERLL 386
++G P IEKAG+AHK+DFR G L L+++++E+ +DFAFVDADK N++ YHE+LL
Sbjct: 444 EVGRPFIEKAGMAHKVDFREGTGLERLEELLAEDDGAASYDFAFVDADKPNYVRYHEQLL 623
Query: 385 QLLRVGGLIAYDNTLWGGSVAAPHDEPLSE 296
+L+RVGG I YDNTLWGG+VA P PLS+
Sbjct: 624 RLVRVGGTIIYDNTLWGGTVALPAGTPLSD 713
Score = 72.5 bits (152), Expect(3) = 1e-022
Identities = 40/78 (51%), Positives = 42/78 (53%)
Frame = +3 / -2
Query: 327 TDPPHSVLS*AMRPPTLXXXXXXXW*LRKFTLSASTNAKSNLPLFPSSETIWSSTGSASP 506
T PP SVLS* M PPT W* LSASTNAKS L SS S P
Sbjct: 682 TVPPQSVLS*MMVPPTRTSRSSCSW*RT*LGLSASTNAKS*LAAPSSSARSSSRRSRPVP 503
Query: 507 TRKSILCATPAFSITGDP 560
+RKS LCA PAFS+ G P
Sbjct: 502 SRKSTLCAMPAFSMKGRP 449
Score = 46.4 bits (95), Expect(3) = 1e-022
Identities = 23/47 (48%), Positives = 28/47 (59%)
Frame = +3 / -1
Query: 615 GRARAVNEQRVPGEDANLDGVLGAKNLDQELQQLHLVRRRSHARHGV 755
G + +QRV E A+LD +LG +LDQ QQL LVR R H GV
Sbjct: 398 GERQRGGQQRVAREHAHLDRLLGPCHLDQHPQQLRLVRGRLHVTPGV 258
Score = 43.7 bits (89), Expect(3) = 5e-046
Identities = 20/40 (50%), Positives = 21/40 (52%)
Frame = -2 / +3
Query: 755 HPMAGMAASPDXXXXXXXXXXXLGAKNAIEVGVFTGYSLL 636
HP M +S D GAK IEVGVFTGYSLL
Sbjct: 258 HPWGYMQSSSDEAQLLGMLIKMAGAKKTIEVGVFTGYSLL 377
Score = 42.3 bits (86), Expect(3) = 5e-046
Identities = 17/22 (77%), Positives = 19/22 (86%)
Frame = -3 / +3
Query: 631 TALALPDDGKIVAIDVTRESYD 566
TALALP+DGKIVAID RE Y+
Sbjct: 381 TALALPEDGKIVAIDTDRECYE 446
Score = 24.9 bits (48), Expect(3) = 1e-022
Identities = 10/16 (62%), Positives = 13/16 (81%)
Frame = +2 / -1
Query: 566 VVALAGNVDGHNLAVV 613
+VAL VDGH+LAV+
Sbjct: 446 LVALTVGVDGHDLAVL 399
>gb|AL503249.1|AL503249 AL503249 Hordeum vulgare Barke roots Hordeum vulgare subsp. vulgare
cDNA clone HW01E24T 5', mRNA sequence
Length = 700
Score = 137 bits (293), Expect(3) = 5e-046
Identities = 52/90 (57%), Positives = 70/90 (77%)
Frame = -3 / +2
Query: 565 QIGSPVIEKAGVAHKIDFRVGLALPVLDQMVSEEGNKGKFDFAFVDADKVNFLNYHERLL 386
++G P IEKAG+AHK+DFR G L L+++++E+ +DFAFVDADK N++ YHE+LL
Sbjct: 407 EVGRPFIEKAGMAHKVDFREGTGLERLEELLAEDDGAASYDFAFVDADKPNYVRYHEQLL 586
Query: 385 QLLRVGGLIAYDNTLWGGSVAAPHDEPLSE 296
+L+RVGG I YDNTLWGG+VA P PLS+
Sbjct: 587 RLVRVGGTIIYDNTLWGGTVALPAGTPLSD 676
Score = 72.5 bits (152), Expect(3) = 1e-022
Identities = 40/78 (51%), Positives = 42/78 (53%)
Frame = +3 / -2
Query: 327 TDPPHSVLS*AMRPPTLXXXXXXXW*LRKFTLSASTNAKSNLPLFPSSETIWSSTGSASP 506
T PP SVLS* M PPT W* LSASTNAKS L SS S P
Sbjct: 645 TVPPQSVLS*MMVPPTRTSRSSCSW*RT*LGLSASTNAKS*LAAPSSSARSSSRRSRPVP 466
Query: 507 TRKSILCATPAFSITGDP 560
+RKS LCA PAFS+ G P
Sbjct: 465 SRKSTLCAMPAFSMKGRP 412
Score = 46.4 bits (95), Expect(3) = 1e-022
Identities = 23/47 (48%), Positives = 28/47 (59%)
Frame = +3 / -1
Query: 615 GRARAVNEQRVPGEDANLDGVLGAKNLDQELQQLHLVRRRSHARHGV 755
G + +QRV E A+LD +LG +LDQ QQL LVR R H GV
Sbjct: 361 GERQRGGQQRVAREHAHLDRLLGPCHLDQHPQQLRLVRGRLHVTPGV 221
Score = 43.7 bits (89), Expect(3) = 5e-046
Identities = 20/40 (50%), Positives = 21/40 (52%)
Frame = -2 / +2
Query: 755 HPMAGMAASPDXXXXXXXXXXXLGAKNAIEVGVFTGYSLL 636
HP M +S D GAK IEVGVFTGYSLL
Sbjct: 221 HPWGYMQSSSDEAQLLGMLIKMAGAKKTIEVGVFTGYSLL 340
Score = 42.3 bits (86), Expect(3) = 5e-046
Identities = 17/22 (77%), Positives = 19/22 (86%)
Frame = -3 / +2
Query: 631 TALALPDDGKIVAIDVTRESYD 566
TALALP+DGKIVAID RE Y+
Sbjct: 344 TALALPEDGKIVAIDTDRECYE 409
Score = 24.9 bits (48), Expect(3) = 1e-022
Identities = 10/16 (62%), Positives = 13/16 (81%)
Frame = +2 / -1
Query: 566 VVALAGNVDGHNLAVV 613
+VAL VDGH+LAV+
Sbjct: 409 LVALTVGVDGHDLAVL 362
>gb|BE216491.2|BE216491 HV_CEb0010K05f Hordeum vulgare seedling green leaf EST library
HVcDNA0005 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEb0010K05f, mRNA sequence
Length = 697
Score = 137 bits (293), Expect(3) = 5e-046
Identities = 52/90 (57%), Positives = 70/90 (77%)
Frame = -3 / +2
Query: 565 QIGSPVIEKAGVAHKIDFRVGLALPVLDQMVSEEGNKGKFDFAFVDADKVNFLNYHERLL 386
++G P IEKAG+AHK+DFR G L L+++++E+ +DFAFVDADK N++ YHE+LL
Sbjct: 407 EVGRPFIEKAGMAHKVDFREGTGLERLEELLAEDDGAASYDFAFVDADKPNYVRYHEQLL 586
Query: 385 QLLRVGGLIAYDNTLWGGSVAAPHDEPLSE 296
+L+RVGG I YDNTLWGG+VA P PLS+
Sbjct: 587 RLVRVGGTIIYDNTLWGGTVALPAGTPLSD 676
Score = 72.5 bits (152), Expect(3) = 1e-022
Identities = 40/78 (51%), Positives = 42/78 (53%)
Frame = +3 / -2
Query: 327 TDPPHSVLS*AMRPPTLXXXXXXXW*LRKFTLSASTNAKSNLPLFPSSETIWSSTGSASP 506
T PP SVLS* M PPT W* LSASTNAKS L SS S P
Sbjct: 645 TVPPQSVLS*MMVPPTRTSRSSCSW*RT*LGLSASTNAKS*LAAPSSSARSSSRRSRPVP 466
Query: 507 TRKSILCATPAFSITGDP 560
+RKS LCA PAFS+ G P
Sbjct: 465 SRKSTLCAMPAFSMKGRP 412
Score = 46.4 bits (95), Expect(3) = 1e-022
Identities = 23/47 (48%), Positives = 28/47 (59%)
Frame = +3 / -1
Query: 615 GRARAVNEQRVPGEDANLDGVLGAKNLDQELQQLHLVRRRSHARHGV 755
G + +QRV E A+LD +LG +LDQ QQL LVR R H GV
Sbjct: 361 GERQRGGQQRVAREHAHLDRLLGPCHLDQHPQQLRLVRGRLHVTPGV 221
Score = 43.7 bits (89), Expect(3) = 5e-046
Identities = 20/40 (50%), Positives = 21/40 (52%)
Frame = -2 / +2
Query: 755 HPMAGMAASPDXXXXXXXXXXXLGAKNAIEVGVFTGYSLL 636
HP M +S D GAK IEVGVFTGYSLL
Sbjct: 221 HPWGYMQSSSDEAQLLGMLIKMAGAKKTIEVGVFTGYSLL 340
Score = 42.3 bits (86), Expect(3) = 5e-046
Identities = 17/22 (77%), Positives = 19/22 (86%)
Frame = -3 / +2
Query: 631 TALALPDDGKIVAIDVTRESYD 566
TALALP+DGKIVAID RE Y+
Sbjct: 344 TALALPEDGKIVAIDTDRECYE 409
Score = 24.9 bits (48), Expect(3) = 1e-022
Identities = 10/16 (62%), Positives = 13/16 (81%)
Frame = +2 / -1
Query: 566 VVALAGNVDGHNLAVV 613
+VAL VDGH+LAV+
Sbjct: 409 LVALTVGVDGHDLAVL 362
>gb|BM370604.2|BM370604 EBro08_SQ004_L13_R root, 3 week, drought-stressed, cv Optic, EBro08
Hordeum vulgare subsp. vulgare cDNA clone
EBro08_SQ004_L13 5', mRNA sequence
Length = 673
Score = 136 bits (291), Expect(3) = 9e-046
Identities = 52/89 (58%), Positives = 69/89 (77%)
Frame = -3 / +3
Query: 565 QIGSPVIEKAGVAHKIDFRVGLALPVLDQMVSEEGNKGKFDFAFVDADKVNFLNYHERLL 386
++G P IEKAG+AHK+DFR G L L+++++E+ +DFAFVDADK N++ YHE+LL
Sbjct: 405 EVGRPFIEKAGMAHKVDFREGTGLERLEELLAEDDGAASYDFAFVDADKPNYVRYHEQLL 584
Query: 385 QLLRVGGLIAYDNTLWGGSVAAPHDEPLS 299
+L+RVGG I YDNTLWGG+VA P PLS
Sbjct: 585 RLVRVGGTIIYDNTLWGGTVALPAGTPLS 671
Score = 72.5 bits (152), Expect(3) = 1e-022
Identities = 40/78 (51%), Positives = 42/78 (53%)
Frame = +3 / -1
Query: 327 TDPPHSVLS*AMRPPTLXXXXXXXW*LRKFTLSASTNAKSNLPLFPSSETIWSSTGSASP 506
T PP SVLS* M PPT W* LSASTNAKS L SS S P
Sbjct: 643 TVPPQSVLS*MMVPPTRTSRSSCSW*RT*LGLSASTNAKS*LAAPSSSARSSSRRSRPVP 464
Query: 507 TRKSILCATPAFSITGDP 560
+RKS LCA PAFS+ G P
Sbjct: 463 SRKSTLCAMPAFSMKGRP 410
Score = 46.4 bits (95), Expect(3) = 1e-022
Identities = 23/47 (48%), Positives = 28/47 (59%)
Frame = +3 / -3
Query: 615 GRARAVNEQRVPGEDANLDGVLGAKNLDQELQQLHLVRRRSHARHGV 755
G + +QRV E A+LD +LG +LDQ QQL LVR R H GV
Sbjct: 359 GERQRGGQQRVAREHAHLDRLLGPCHLDQHPQQLRLVRGRLHVTPGV 219
Score = 43.7 bits (89), Expect(3) = 9e-046
Identities = 20/40 (50%), Positives = 21/40 (52%)
Frame = -2 / +3
Query: 755 HPMAGMAASPDXXXXXXXXXXXLGAKNAIEVGVFTGYSLL 636
HP M +S D GAK IEVGVFTGYSLL
Sbjct: 219 HPWGYMQSSSDEAQLLGMLIKMAGAKKTIEVGVFTGYSLL 338
Score = 42.3 bits (86), Expect(3) = 9e-046
Identities = 17/22 (77%), Positives = 19/22 (86%)
Frame = -3 / +3
Query: 631 TALALPDDGKIVAIDVTRESYD 566
TALALP+DGKIVAID RE Y+
Sbjct: 342 TALALPEDGKIVAIDTDRECYE 407
Score = 24.9 bits (48), Expect(3) = 1e-022
Identities = 10/16 (62%), Positives = 13/16 (81%)
Frame = +2 / -3
Query: 566 VVALAGNVDGHNLAVV 613
+VAL VDGH+LAV+
Sbjct: 407 LVALTVGVDGHDLAVL 360
>gb|BE519617.1|BE519617 HV_CEb0016H01f Hordeum vulgare seedling green leaf EST library
HVcDNA0005 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEb0016H01f, mRNA sequence
Length = 705
Score = 134 bits (288), Expect(3) = 2e-045
Identities = 52/90 (57%), Positives = 69/90 (76%)
Frame = -3 / +3
Query: 565 QIGSPVIEKAGVAHKIDFRVGLALPVLDQMVSEEGNKGKFDFAFVDADKVNFLNYHERLL 386
++G P IEKAG+AHK+DFR G L L+++++E+ DFAFVDADK N++ YHE+LL
Sbjct: 414 EVGRPFIEKAGMAHKVDFREGTGLERLEELLAEDDGAASCDFAFVDADKPNYVRYHEQLL 593
Query: 385 QLLRVGGLIAYDNTLWGGSVAAPHDEPLSE 296
+L+RVGG I YDNTLWGG+VA P PLS+
Sbjct: 594 RLVRVGGTIIYDNTLWGGTVALPAGTPLSD 683
Score = 74.4 bits (156), Expect(3) = 3e-023
Identities = 40/78 (51%), Positives = 42/78 (53%)
Frame = +3 / -3
Query: 327 TDPPHSVLS*AMRPPTLXXXXXXXW*LRKFTLSASTNAKSNLPLFPSSETIWSSTGSASP 506
T PP SVLS* M PPT W* LSASTNAKS L SS S P
Sbjct: 652 TVPPQSVLS*MMVPPTRTSRSSCSW*RT*LGLSASTNAKSQLAAPSSSARSSSRRSRPVP 473
Query: 507 TRKSILCATPAFSITGDP 560
+RKS LCA PAFS+ G P
Sbjct: 472 SRKSTLCAMPAFSMKGRP 419
Score = 46.4 bits (95), Expect(3) = 3e-023
Identities = 23/47 (48%), Positives = 28/47 (59%)
Frame = +3 / -2
Query: 615 GRARAVNEQRVPGEDANLDGVLGAKNLDQELQQLHLVRRRSHARHGV 755
G + +QRV E A+LD +LG +LDQ QQL LVR R H GV
Sbjct: 368 GERQRGGQQRVAREHAHLDRLLGPCHLDQHPQQLRLVRGRLHVTPGV 228
Score = 43.7 bits (89), Expect(3) = 2e-045
Identities = 20/40 (50%), Positives = 21/40 (52%)
Frame = -2 / +3
Query: 755 HPMAGMAASPDXXXXXXXXXXXLGAKNAIEVGVFTGYSLL 636
HP M +S D GAK IEVGVFTGYSLL
Sbjct: 228 HPWGYMQSSSDEAQLLGMLIKMAGAKKTIEVGVFTGYSLL 347
Score = 42.3 bits (86), Expect(3) = 2e-045
Identities = 17/22 (77%), Positives = 19/22 (86%)
Frame = -3 / +3
Query: 631 TALALPDDGKIVAIDVTRESYD 566
TALALP+DGKIVAID RE Y+
Sbjct: 351 TALALPEDGKIVAIDTDRECYE 416
Score = 24.9 bits (48), Expect(3) = 3e-023
Identities = 10/16 (62%), Positives = 13/16 (81%)
Frame = +2 / -2
Query: 566 VVALAGNVDGHNLAVV 613
+VAL VDGH+LAV+
Sbjct: 416 LVALTVGVDGHDLAVL 369
>gb|BF624054.2|BF624054 HVSMEa0009A08f Hordeum vulgare seedling shoot EST library
HVcDNA0001 (Cold stress) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEa0009A08f, mRNA sequence
Length = 804
Score = 134 bits (287), Expect(3) = 3e-045
Identities = 51/88 (57%), Positives = 68/88 (77%)
Frame = -3 / +3
Query: 565 QIGSPVIEKAGVAHKIDFRVGLALPVLDQMVSEEGNKGKFDFAFVDADKVNFLNYHERLL 386
++G P IEKAG+AHK+DFR G L L+++++E+ +DFAFVDADK N++ YHE+LL
Sbjct: 414 EVGRPFIEKAGMAHKVDFREGTGLERLEELLAEDDGAASYDFAFVDADKPNYVRYHEQLL 593
Query: 385 QLLRVGGLIAYDNTLWGGSVAAPHDEPL 302
+L+RVGG I YDNTLWGG+VA P PL
Sbjct: 594 RLVRVGGTIIYDNTLWGGTVALPAGTPL 677
Score = 72.5 bits (152), Expect(3) = 1e-022
Identities = 40/78 (51%), Positives = 42/78 (53%)
Frame = +3 / -3
Query: 327 TDPPHSVLS*AMRPPTLXXXXXXXW*LRKFTLSASTNAKSNLPLFPSSETIWSSTGSASP 506
T PP SVLS* M PPT W* LSASTNAKS L SS S P
Sbjct: 652 TVPPQSVLS*MMVPPTRTSRSSCSW*RT*LGLSASTNAKS*LAAPSSSARSSSRRSRPVP 473
Query: 507 TRKSILCATPAFSITGDP 560
+RKS LCA PAFS+ G P
Sbjct: 472 SRKSTLCAMPAFSMKGRP 419
Score = 46.4 bits (95), Expect(3) = 1e-022
Identities = 23/47 (48%), Positives = 28/47 (59%)
Frame = +3 / -2
Query: 615 GRARAVNEQRVPGEDANLDGVLGAKNLDQELQQLHLVRRRSHARHGV 755
G + +QRV E A+LD +LG +LDQ QQL LVR R H GV
Sbjct: 368 GERQRGGQQRVAREHAHLDRLLGPCHLDQHPQQLRLVRGRLHVTPGV 228
Score = 43.7 bits (89), Expect(3) = 3e-045
Identities = 20/40 (50%), Positives = 21/40 (52%)
Frame = -2 / +3
Query: 755 HPMAGMAASPDXXXXXXXXXXXLGAKNAIEVGVFTGYSLL 636
HP M +S D GAK IEVGVFTGYSLL
Sbjct: 228 HPWGYMQSSSDEAQLLGMLIKMAGAKKTIEVGVFTGYSLL 347
Score = 42.3 bits (86), Expect(3) = 3e-045
Identities = 17/22 (77%), Positives = 19/22 (86%)
Frame = -3 / +3
Query: 631 TALALPDDGKIVAIDVTRESYD 566
TALALP+DGKIVAID RE Y+
Sbjct: 351 TALALPEDGKIVAIDTDRECYE 416
Score = 24.9 bits (48), Expect(3) = 1e-022
Identities = 10/16 (62%), Positives = 13/16 (81%)
Frame = +2 / -2
Query: 566 VVALAGNVDGHNLAVV 613
+VAL VDGH+LAV+
Sbjct: 416 LVALTVGVDGHDLAVL 369
>gb|BE214450.2|BE214450 HV_CEb0003H21f Hordeum vulgare seedling green leaf EST library
HVcDNA0005 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEb0003H21f, mRNA sequence
Length = 694
Score = 134 bits (287), Expect(3) = 3e-045
Identities = 51/88 (57%), Positives = 68/88 (77%)
Frame = -3 / +3
Query: 565 QIGSPVIEKAGVAHKIDFRVGLALPVLDQMVSEEGNKGKFDFAFVDADKVNFLNYHERLL 386
++G P IEKAG+AHK+DFR G L L+++++E+ +DFAFVDADK N++ YHE+LL
Sbjct: 384 EVGRPFIEKAGMAHKVDFREGTGLERLEELLAEDDGAASYDFAFVDADKPNYVRYHEQLL 563
Query: 385 QLLRVGGLIAYDNTLWGGSVAAPHDEPL 302
+L+RVGG I YDNTLWGG+VA P PL
Sbjct: 564 RLVRVGGTIIYDNTLWGGTVALPAGTPL 647
Score = 72.5 bits (152), Expect(3) = 1e-022
Identities = 40/78 (51%), Positives = 42/78 (53%)
Frame = +3 / -1
Query: 327 TDPPHSVLS*AMRPPTLXXXXXXXW*LRKFTLSASTNAKSNLPLFPSSETIWSSTGSASP 506
T PP SVLS* M PPT W* LSASTNAKS L SS S P
Sbjct: 622 TVPPQSVLS*MMVPPTRTSRSSCSW*RT*LGLSASTNAKS*LAAPSSSARSSSRRSRPVP 443
Query: 507 TRKSILCATPAFSITGDP 560
+RKS LCA PAFS+ G P
Sbjct: 442 SRKSTLCAMPAFSMKGRP 389
Score = 46.4 bits (95), Expect(3) = 1e-022
Identities = 23/47 (48%), Positives = 28/47 (59%)
Frame = +3 / -3
Query: 615 GRARAVNEQRVPGEDANLDGVLGAKNLDQELQQLHLVRRRSHARHGV 755
G + +QRV E A+LD +LG +LDQ QQL LVR R H GV
Sbjct: 338 GERQRGGQQRVAREHAHLDRLLGPCHLDQHPQQLRLVRGRLHVTPGV 198
Score = 43.7 bits (89), Expect(3) = 3e-045
Identities = 20/40 (50%), Positives = 21/40 (52%)
Frame = -2 / +3
Query: 755 HPMAGMAASPDXXXXXXXXXXXLGAKNAIEVGVFTGYSLL 636
HP M +S D GAK IEVGVFTGYSLL
Sbjct: 198 HPWGYMQSSSDEAQLLGMLIKMAGAKKTIEVGVFTGYSLL 317
Score = 42.3 bits (86), Expect(3) = 3e-045
Identities = 17/22 (77%), Positives = 19/22 (86%)
Frame = -3 / +3
Query: 631 TALALPDDGKIVAIDVTRESYD 566
TALALP+DGKIVAID RE Y+
Sbjct: 321 TALALPEDGKIVAIDTDRECYE 386
Score = 24.9 bits (48), Expect(3) = 1e-022
Identities = 10/16 (62%), Positives = 13/16 (81%)
Frame = +2 / -3
Query: 566 VVALAGNVDGHNLAVV 613
+VAL VDGH+LAV+
Sbjct: 386 LVALTVGVDGHDLAVL 339
>gb|BI960166.1|BI960166 HVSMEn0023I06f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0023I06f, mRNA sequence
Length = 630
Score = 134 bits (287), Expect(3) = 3e-045
Identities = 51/88 (57%), Positives = 68/88 (77%)
Frame = -3 / +2
Query: 565 QIGSPVIEKAGVAHKIDFRVGLALPVLDQMVSEEGNKGKFDFAFVDADKVNFLNYHERLL 386
++G P IEKAG+AHK+DFR G L L+++++E+ +DFAFVDADK N++ YHE+LL
Sbjct: 281 EVGRPFIEKAGMAHKVDFREGTGLERLEELLAEDDGAASYDFAFVDADKPNYVRYHEQLL 460
Query: 385 QLLRVGGLIAYDNTLWGGSVAAPHDEPL 302
+L+RVGG I YDNTLWGG+VA P PL
Sbjct: 461 RLVRVGGTIIYDNTLWGGTVALPAGAPL 544
Score = 72.5 bits (152), Expect(3) = 1e-022
Identities = 40/78 (51%), Positives = 42/78 (53%)
Frame = +3 / -1
Query: 327 TDPPHSVLS*AMRPPTLXXXXXXXW*LRKFTLSASTNAKSNLPLFPSSETIWSSTGSASP 506
T PP SVLS* M PPT W* LSASTNAKS L SS S P
Sbjct: 519 TVPPQSVLS*MMVPPTRTSRSSCSW*RT*LGLSASTNAKS*LAAPSSSARSSSRRSRPVP 340
Query: 507 TRKSILCATPAFSITGDP 560
+RKS LCA PAFS+ G P
Sbjct: 339 SRKSTLCAMPAFSMKGRP 286
Score = 46.4 bits (95), Expect(3) = 1e-022
Identities = 23/47 (48%), Positives = 28/47 (59%)
Frame = +3 / -3
Query: 615 GRARAVNEQRVPGEDANLDGVLGAKNLDQELQQLHLVRRRSHARHGV 755
G + +QRV E A+LD +LG +LDQ QQL LVR R H GV
Sbjct: 235 GERQRGGQQRVAREHAHLDRLLGPCHLDQHPQQLRLVRGRLHVTPGV 95
Score = 43.7 bits (89), Expect(3) = 3e-045
Identities = 20/40 (50%), Positives = 21/40 (52%)
Frame = -2 / +2
Query: 755 HPMAGMAASPDXXXXXXXXXXXLGAKNAIEVGVFTGYSLL 636
HP M +S D GAK IEVGVFTGYSLL
Sbjct: 95 HPWGYMQSSSDEAQLLGMLIKMAGAKKTIEVGVFTGYSLL 214
Score = 42.3 bits (86), Expect(3) = 3e-045
Identities = 17/22 (77%), Positives = 19/22 (86%)
Frame = -3 / +2
Query: 631 TALALPDDGKIVAIDVTRESYD 566
TALALP+DGKIVAID RE Y+
Sbjct: 218 TALALPEDGKIVAIDTDRECYE 283
Score = 24.9 bits (48), Expect(3) = 1e-022
Identities = 10/16 (62%), Positives = 13/16 (81%)
Frame = +2 / -3
Query: 566 VVALAGNVDGHNLAVV 613
+VAL VDGH+LAV+
Sbjct: 283 LVALTVGVDGHDLAVL 236
>gb|BI779178.2|BI779178 EBro01_SQ003_D18_R root, 3 week, hydroponic grown, no treatment, cv
Optic, EBro01 Hordeum vulgare subsp. vulgare cDNA clone
EBro01_SQ003_D18 5', mRNA sequence
Length = 540
Score = 146 bits (313), Expect(3) = 6e-045
Identities = 59/123 (47%), Positives = 80/123 (65%)
Frame = -3 / +1
Query: 556 SPVIEKAGVAHKIDFRVGLALPVLDQMVSEEGNKGKFDFAFVDADKVNFLNYHERLLQLL 377
+P + G+AHK DFR G L L+++++E+ +DFAFVDADK N++ YHE+LL+L+
Sbjct: 172 APSSRRRGMAHKGDFREGTGLERLEELLAEDDGAASYDFAFVDADKPNYVRYHEQLLRLV 351
Query: 376 RVGGLIAYDNTLWGGSVAAPHDEPLSEXXXXXXXXXXXXXXXXXADPRVHVCQVAIADGL 197
RVGG I YDNTLWGG+VA P PLS+ ADPR+ CQ+AIADG+
Sbjct: 352 RVGGTIIYDNTLWGGTVALPAGTPLSDLDTRFSGGLRDLNAKLAADPRIEGCQLAIADGV 531
Query: 196 XLC 188
+C
Sbjct: 532 TIC 540
Score = 36.8 bits (74), Expect(3) = 6e-045
Identities = 15/17 (88%), Positives = 15/17 (88%)
Frame = -2 / +2
Query: 686 GAKNAIEVGVFTGYSLL 636
GAK IEVGVFTGYSLL
Sbjct: 44 GAKKTIEVGVFTGYSLL 94
Score = 36.3 bits (73), Expect(3) = 6e-045
Identities = 15/18 (83%), Positives = 16/18 (88%)
Frame = -3 / +2
Query: 631 TALALPDDGKIVAIDVTR 578
TALALP+DGKIVAID R
Sbjct: 98 TALALPEDGKIVAIDTDR 151
>gb|BF065240.1|BF065240 HV_CEb0024I11f Hordeum vulgare seedling green leaf EST library
HVcDNA0005 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEb0024I11f, mRNA sequence
Length = 807
Score = 132 bits (282), Expect(3) = 2e-044
Identities = 51/90 (56%), Positives = 68/90 (75%)
Frame = -3 / +3
Query: 565 QIGSPVIEKAGVAHKIDFRVGLALPVLDQMVSEEGNKGKFDFAFVDADKVNFLNYHERLL 386
++G P IEKAG+AHK+DFR G L L+++++E+ +DFAF DADK N++ YHE+LL
Sbjct: 429 EVGRPFIEKAGMAHKVDFREGTGLERLEELLAEDDGAASYDFAFGDADKPNYVRYHEQLL 608
Query: 385 QLLRVGGLIAYDNTLWGGSVAAPHDEPLSE 296
+L+R GG I YDNTLWGG+VA P PLSE
Sbjct: 609 RLVRGGGTIIYDNTLWGGTVALPGGTPLSE 698
Score = 67.0 bits (140), Expect(3) = 5e-021
Identities = 38/78 (48%), Positives = 40/78 (51%)
Frame = +3 / -3
Query: 327 TDPPHSVLS*AMRPPTLXXXXXXXW*LRKFTLSASTNAKSNLPLFPSSETIWSSTGSASP 506
T PP SVLS* M PP W* LSAS NAKS L SS S P
Sbjct: 667 TVPPQSVLS*MMVPPPRTSRSSCSW*RT*LGLSASPNAKS*LAAPSSSARSSSRRSRPVP 488
Query: 507 TRKSILCATPAFSITGDP 560
+RKS LCA PAFS+ G P
Sbjct: 487 SRKSTLCAMPAFSMKGRP 434
Score = 46.4 bits (95), Expect(3) = 5e-021
Identities = 23/47 (48%), Positives = 28/47 (59%)
Frame = +3 / -2
Query: 615 GRARAVNEQRVPGEDANLDGVLGAKNLDQELQQLHLVRRRSHARHGV 755
G + +QRV E A+LD +LG +LDQ QQL LVR R H GV
Sbjct: 383 GERQRGGQQRVAREHAHLDRLLGPCHLDQHPQQLRLVRGRLHVTPGV 243
Score = 43.7 bits (89), Expect(3) = 2e-044
Identities = 20/40 (50%), Positives = 21/40 (52%)
Frame = -2 / +3
Query: 755 HPMAGMAASPDXXXXXXXXXXXLGAKNAIEVGVFTGYSLL 636
HP M +S D GAK IEVGVFTGYSLL
Sbjct: 243 HPWGYMQSSSDEAQLLGMLIKMAGAKKTIEVGVFTGYSLL 362
Score = 42.3 bits (86), Expect(3) = 2e-044
Identities = 17/22 (77%), Positives = 19/22 (86%)
Frame = -3 / +3
Query: 631 TALALPDDGKIVAIDVTRESYD 566
TALALP+DGKIVAID RE Y+
Sbjct: 366 TALALPEDGKIVAIDTDRECYE 431
Score = 24.9 bits (48), Expect(3) = 5e-021
Identities = 10/16 (62%), Positives = 13/16 (81%)
Frame = +2 / -2
Query: 566 VVALAGNVDGHNLAVV 613
+VAL VDGH+LAV+
Sbjct: 431 LVALTVGVDGHDLAVL 384
>gb|CA030887.1|CA030887 HX08G19r HX Hordeum vulgare subsp. vulgare cDNA clone HX08G19
5-PRIME, mRNA sequence
Length = 577
Score = 177 bits (382), Expect = 5e-044
Identities = 71/128 (55%), Positives = 88/128 (68%)
Frame = -3 / -3
Query: 565 QIGSPVIEKAGVAHKIDFRVGLALPVLDQMVSEEGNKGKFDFAFVDADKVNFLNYHERLL 386
++G P IEKAGVAHKIDFR G ALPVLD ++ +E N G FDF FVDADK N+LNYHERL+
Sbjct: 575 ELGLPCIEKAGVAHKIDFREGPALPVLDALLEDEANHGTFDFVFVDADKDNYLNYHERLM 396
Query: 385 QLLRVGGLIAYDNTLWGGSVAAPHDEPLSEXXXXXXXXXXXXXXXXXADPRVHVCQVAIA 206
+L++VGGL+ YDNTLW GSV P D P+ + AD RV +CQ+ +
Sbjct: 395 KLVKVGGLLGYDNTLWNGSVVLPADAPMRKYIRYYRDFVLDLNKALAADQRVEICQLPVG 216
Query: 205 DGLXLCRR 182
DG+ LCRR
Sbjct: 215 DGITLCRR 192
>gb|CA006913.1|CA006913 HU06B07r HU Hordeum vulgare subsp. vulgare cDNA clone HU06B07
5-PRIME, mRNA sequence
Length = 454
Score = 137 bits (293), Expect(3) = 5e-044
Identities = 52/90 (57%), Positives = 70/90 (77%)
Frame = -3 / +3
Query: 565 QIGSPVIEKAGVAHKIDFRVGLALPVLDQMVSEEGNKGKFDFAFVDADKVNFLNYHERLL 386
++G P IEKAG+AHK+DFR G L L+++++E+ +DFAFVDADK N++ YHE+LL
Sbjct: 138 EVGRPFIEKAGMAHKVDFREGTGLERLEELLAEDDGAASYDFAFVDADKPNYVRYHEQLL 317
Query: 385 QLLRVGGLIAYDNTLWGGSVAAPHDEPLSE 296
+L+RVGG I YDNTLWGG+VA P PLS+
Sbjct: 318 RLVRVGGTIIYDNTLWGGTVALPAGTPLSD 407
Score = 72.5 bits (152), Expect(3) = 6e-021
Identities = 40/78 (51%), Positives = 42/78 (53%)
Frame = +3 / -1
Query: 327 TDPPHSVLS*AMRPPTLXXXXXXXW*LRKFTLSASTNAKSNLPLFPSSETIWSSTGSASP 506
T PP SVLS* M PPT W* LSASTNAKS L SS S P
Sbjct: 376 TVPPQSVLS*MMVPPTRTSRSSCSW*RT*LGLSASTNAKS*LAAPSSSARSSSRRSRPVP 197
Query: 507 TRKSILCATPAFSITGDP 560
+RKS LCA PAFS+ G P
Sbjct: 196 SRKSTLCAMPAFSMKGRP 143
Score = 42.3 bits (86), Expect(3) = 5e-044
Identities = 17/22 (77%), Positives = 19/22 (86%)
Frame = -3 / +3
Query: 631 TALALPDDGKIVAIDVTRESYD 566
TALALP+DGKIVAID RE Y+
Sbjct: 75 TALALPEDGKIVAIDTDRECYE 140
Score = 36.8 bits (74), Expect(3) = 5e-044
Identities = 15/17 (88%), Positives = 15/17 (88%)
Frame = -2 / +3
Query: 686 GAKNAIEVGVFTGYSLL 636
GAK IEVGVFTGYSLL
Sbjct: 21 GAKKTIEVGVFTGYSLL 71
Score = 33.6 bits (67), Expect(3) = 6e-021
Identities = 18/28 (64%), Positives = 18/28 (64%)
Frame = +3 / -1
Query: 567 S*LSRVTSMATILPSSGRARAVNEQRVP 650
S* SR SMATILPSSG A AV P
Sbjct: 139 S*HSRSVSMATILPSSGSASAVASSE*P 56
Score = 31.8 bits (63), Expect(3) = 6e-021
Identities = 13/17 (76%), Positives = 14/17 (82%)
Frame = +1 / -1
Query: 637 SSEYPVKTPTSMAFLAP 687
SSE PV TPTS+ FLAP
Sbjct: 70 SSE*PVNTPTSIVFLAP 20
>gb|BF256079.2|BF256079 HVSMEf0008K20f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEf0008K20f, mRNA sequence
Length = 853
Score = 98.7 bits (209), Expect(4) = 8e-044
Identities = 36/55 (65%), Positives = 48/55 (87%)
Frame = -3 / +1
Query: 460 NKGKFDFAFVDADKVNFLNYHERLLQLLRVGGLIAYDNTLWGGSVAAPHDEPLSE 296
++G FDFAFVDADK N+ +YHE+LL+L+RVGG++AYDNTLWGG+V+ P D P +E
Sbjct: 484 DEGSFDFAFVDADKYNYGSYHEQLLRLVRVGGVLAYDNTLWGGTVSMPDDTPFTE 648
Score = 56.5 bits (117), Expect(4) = 8e-044
Identities = 21/36 (58%), Positives = 30/36 (83%)
Frame = -3 / +1
Query: 571 YDQIGSPVIEKAGVAHKIDFRVGLALPVLDQMVSEE 464
Y +G PVI+KAGVAHK+DFR G A P+LD+++++E
Sbjct: 376 YFDLGLPVIKKAGVAHKVDFREGPAGPILDKLIADE 483
Score = 50.1 bits (103), Expect(4) = 5e-024
Identities = 26/51 (50%), Positives = 29/51 (56%)
Frame = +3 / -3
Query: 327 TDPPHSVLS*AMRPPTLXXXXXXXW*LRKFTLSASTNAKSNLPLFPSSETI 479
T PP SVLS*A PPT W*L LSAST AKS LP S+ ++
Sbjct: 617 TVPPQSVLS*ASTPPTRTSRSSCSW*LP*LYLSASTKAKSKLPSSSSAMSL 465
Score = 43.7 bits (89), Expect(4) = 8e-044
Identities = 16/22 (72%), Positives = 21/22 (95%)
Frame = -3 / +1
Query: 631 TALALPDDGKIVAIDVTRESYD 566
TALA+PDDG+I+AIDV+RE +D
Sbjct: 319 TALAIPDDGRIIAIDVSREYFD 384
Score = 43.2 bits (88), Expect(4) = 5e-024
Identities = 19/32 (59%), Positives = 21/32 (65%)
Frame = +3 / -3
Query: 465 SSETIWSSTGSASPTRKSILCATPAFSITGDP 560
SS S G A P+RKS LCATPAF +TG P
Sbjct: 482 SSAMSLSRMGPAGPSRKSTLCATPAFLMTGRP 387
Score = 41.8 bits (85), Expect(4) = 5e-024
Identities = 18/30 (60%), Positives = 22/30 (73%)
Frame = +3 / -2
Query: 651 GEDANLDGVLGAKNLDQELQQLHLVRRRSH 740
G D +LDG LGA +L+Q+ QQ LVRRR H
Sbjct: 300 GVDPHLDGPLGAHHLEQQRQQQPLVRRRRH 211
Score = 34.5 bits (69), Expect(4) = 8e-044
Identities = 16/40 (40%), Positives = 21/40 (52%)
Frame = -2 / +1
Query: 755 HPMAGMAASPDXXXXXXXXXXXLGAKNAIEVGVFTGYSLL 636
H M++ PD +GAK IEVGV+TG S+L
Sbjct: 196 HIFGFMSSPPDEGLLLSLLLKVMGAKRTIEVGVYTGCSVL 315
Score = 30.4 bits (60), Expect(4) = 5e-024
Identities = 15/25 (60%), Positives = 16/25 (64%)
Frame = +3 / -3
Query: 576 SRVTSMATILPSSGRARAVNEQRVP 650
S +TSMA ILPSSG A AV P
Sbjct: 374 SLLTSMAMILPSSGMASAVVRTEQP 300
>gb|CB859954.1|CB859954 HI12C04w HI Hordeum vulgare subsp. vulgare cDNA clone HI12C04
3-PRIME, mRNA sequence
Length = 552
Score = 177 bits (380), Expect = 1e-043
Identities = 71/127 (55%), Positives = 87/127 (68%)
Frame = -3 / -1
Query: 562 IGSPVIEKAGVAHKIDFRVGLALPVLDQMVSEEGNKGKFDFAFVDADKVNFLNYHERLLQ 383
+G P IEKAGVAHKIDFR G ALPVLD ++ +E N G FDF FVDADK N+LNYHERL++
Sbjct: 552 LGLPCIEKAGVAHKIDFREGPALPVLDALLEDEANHGTFDFVFVDADKDNYLNYHERLMK 373
Query: 382 LLRVGGLIAYDNTLWGGSVAAPHDEPLSEXXXXXXXXXXXXXXXXXADPRVHVCQVAIAD 203
L++VGGL+ YDNTLW GSV P D P+ + AD RV +CQ+ + D
Sbjct: 372 LVKVGGLLGYDNTLWNGSVVLPADAPMRKYIRYYRDFVLDLNKALAADQRVEICQLPVGD 193
Query: 202 GLXLCRR 182
G+ LCRR
Sbjct: 192 GITLCRR 172
>gb|BI960399.1|BI960399 HVSMEn0024H14f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0024H14f, mRNA sequence
Length = 652
Score = 131 bits (280), Expect(3) = 1e-043
Identities = 49/83 (59%), Positives = 66/83 (79%)
Frame = -3 / +3
Query: 565 QIGSPVIEKAGVAHKIDFRVGLALPVLDQMVSEEGNKGKFDFAFVDADKVNFLNYHERLL 386
++G P IEKAG+AHK+DFR G L L+++++E+ +DFAFVDADK N++ YHE+LL
Sbjct: 393 EVGRPFIEKAGMAHKVDFREGTGLERLEELLAEDDGAASYDFAFVDADKPNYVRYHEQLL 572
Query: 385 QLLRVGGLIAYDNTLWGGSVAAP 317
+L+RVGG I YDNTLWGG+VA P
Sbjct: 573 RLVRVGGTIIYDNTLWGGTVALP 641
Score = 72.5 bits (152), Expect(3) = 6e-025
Identities = 40/78 (51%), Positives = 42/78 (53%)
Frame = +3 / -1
Query: 327 TDPPHSVLS*AMRPPTLXXXXXXXW*LRKFTLSASTNAKSNLPLFPSSETIWSSTGSASP 506
T PP SVLS* M PPT W* LSASTNAKS L SS S P
Sbjct: 631 TVPPQSVLS*MMVPPTRTSRSSCSW*RT*LGLSASTNAKS*LAAPSSSARSSSRRSRPVP 452
Query: 507 TRKSILCATPAFSITGDP 560
+RKS LCA PAFS+ G P
Sbjct: 451 SRKSTLCAMPAFSMKGRP 398
Score = 46.0 bits (94), Expect(3) = 6e-025
Identities = 23/47 (48%), Positives = 27/47 (57%)
Frame = +3 / -3
Query: 615 GRARAVNEQRVPGEDANLDGVLGAKNLDQELQQLHLVRRRSHARHGV 755
G + QRV E A+LD +LG +LDQ QQL LVR R H GV
Sbjct: 347 GERQRGGHQRVAREHAHLDRLLGPCHLDQHPQQLRLVRGRMHVTPGV 207
Score = 42.3 bits (86), Expect(3) = 1e-043
Identities = 17/22 (77%), Positives = 19/22 (86%)
Frame = -3 / +3
Query: 631 TALALPDDGKIVAIDVTRESYD 566
TALALP+DGKIVAID RE Y+
Sbjct: 330 TALALPEDGKIVAIDTDRECYE 395
Score = 41.8 bits (85), Expect(3) = 1e-043
Identities = 19/40 (47%), Positives = 21/40 (52%)
Frame = -2 / +3
Query: 755 HPMAGMAASPDXXXXXXXXXXXLGAKNAIEVGVFTGYSLL 636
HP M +S D GAK IEVGVFTGYSL+
Sbjct: 207 HPWGYMHSSSDEAQLLGMLIKMAGAKKTIEVGVFTGYSLV 326
Score = 33.1 bits (66), Expect(3) = 6e-025
Identities = 17/22 (77%), Positives = 17/22 (77%)
Frame = +3 / -1
Query: 567 S*LSRVTSMATILPSSGRARAV 632
S* SR SMATILPSSG A AV
Sbjct: 394 S*HSRSVSMATILPSSGSASAV 329
>gb|BF627066.2|BF627066 HVSMEb0002G16f Hordeum vulgare seedling shoot EST library
HVcDNA0002 (Dehydration stress) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEb0002G16f, mRNA sequence
Length = 684
Score = 98.2 bits (208), Expect(4) = 1e-043
Identities = 36/54 (66%), Positives = 48/54 (88%)
Frame = -3 / +2
Query: 460 NKGKFDFAFVDADKVNFLNYHERLLQLLRVGGLIAYDNTLWGGSVAAPHDEPLS 299
++G FDFAFVDADK N+ +YHE+LL+L+RVGG++AYDNTLWGG+V+ P D PL+
Sbjct: 512 DEGSFDFAFVDADKYNYGSYHEQLLRLVRVGGVLAYDNTLWGGTVSMPDDTPLT 673
Score = 56.5 bits (117), Expect(4) = 1e-043
Identities = 21/36 (58%), Positives = 30/36 (83%)
Frame = -3 / +2
Query: 571 YDQIGSPVIEKAGVAHKIDFRVGLALPVLDQMVSEE 464
Y +G PVI+KAGVAHK+DFR G A P+LD+++++E
Sbjct: 404 YFDLGLPVIKKAGVAHKVDFREGPAGPILDKLIADE 511
Score = 50.1 bits (103), Expect(4) = 5e-024
Identities = 26/51 (50%), Positives = 29/51 (56%)
Frame = +3 / -1
Query: 327 TDPPHSVLS*AMRPPTLXXXXXXXW*LRKFTLSASTNAKSNLPLFPSSETI 479
T PP SVLS*A PPT W*L LSAST AKS LP S+ ++
Sbjct: 645 TVPPQSVLS*ASTPPTRTSRSSCSW*LP*LYLSASTKAKSKLPSSSSAMSL 493
Score = 43.7 bits (89), Expect(4) = 1e-043
Identities = 16/22 (72%), Positives = 21/22 (95%)
Frame = -3 / +2
Query: 631 TALALPDDGKIVAIDVTRESYD 566
TALA+PDDG+I+AIDV+RE +D
Sbjct: 347 TALAIPDDGRIIAIDVSREYFD 412
Score = 43.2 bits (88), Expect(4) = 5e-024
Identities = 19/32 (59%), Positives = 21/32 (65%)
Frame = +3 / -1
Query: 465 SSETIWSSTGSASPTRKSILCATPAFSITGDP 560
SS S G A P+RKS LCATPAF +TG P
Sbjct: 510 SSAMSLSRMGPAGPSRKSTLCATPAFLMTGRP 415
Score = 41.8 bits (85), Expect(4) = 5e-024
Identities = 18/30 (60%), Positives = 22/30 (73%)
Frame = +3 / -3
Query: 651 GEDANLDGVLGAKNLDQELQQLHLVRRRSH 740
G D +LDG LGA +L+Q+ QQ LVRRR H
Sbjct: 328 GVDPHLDGPLGAHHLEQQRQQQPLVRRRRH 239
Score = 34.5 bits (69), Expect(4) = 1e-043
Identities = 16/40 (40%), Positives = 21/40 (52%)
Frame = -2 / +2
Query: 755 HPMAGMAASPDXXXXXXXXXXXLGAKNAIEVGVFTGYSLL 636
H M++ PD +GAK IEVGV+TG S+L
Sbjct: 224 HIFGFMSSPPDEGLLLSLLLKVMGAKRTIEVGVYTGCSVL 343
Score = 30.4 bits (60), Expect(4) = 5e-024
Identities = 15/25 (60%), Positives = 16/25 (64%)
Frame = +3 / -1
Query: 576 SRVTSMATILPSSGRARAVNEQRVP 650
S +TSMA ILPSSG A AV P
Sbjct: 402 SLLTSMAMILPSSGMASAVVRTEQP 328
>gb|BE216025.2|BE216025 HV_CEb0009C13f Hordeum vulgare seedling green leaf EST library
HVcDNA0005 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEb0009C13f, mRNA sequence
Length = 649
Score = 128 bits (274), Expect(3) = 2e-043
Identities = 48/81 (59%), Positives = 65/81 (80%)
Frame = -3 / +2
Query: 565 QIGSPVIEKAGVAHKIDFRVGLALPVLDQMVSEEGNKGKFDFAFVDADKVNFLNYHERLL 386
++G P IEKAG+AHK+DFR G L L+++++E+ +DFAFVDADK N++ YHE+LL
Sbjct: 404 EVGRPFIEKAGMAHKVDFREGTGLERLEELLAEDDGAASYDFAFVDADKPNYVRYHEQLL 583
Query: 385 QLLRVGGLIAYDNTLWGGSVA 323
+L+RVGG I YDNTLWGG+VA
Sbjct: 584 RLVRVGGTIIYDNTLWGGTVA 646
Score = 72.5 bits (152), Expect(3) = 1e-022
Identities = 40/78 (51%), Positives = 42/78 (53%)
Frame = +3 / -2
Query: 327 TDPPHSVLS*AMRPPTLXXXXXXXW*LRKFTLSASTNAKSNLPLFPSSETIWSSTGSASP 506
T PP SVLS* M PPT W* LSASTNAKS L SS S P
Sbjct: 642 TVPPQSVLS*MMVPPTRTSRSSCSW*RT*LGLSASTNAKS*LAAPSSSARSSSRRSRPVP 463
Query: 507 TRKSILCATPAFSITGDP 560
+RKS LCA PAFS+ G P
Sbjct: 462 SRKSTLCAMPAFSMKGRP 409
Score = 46.4 bits (95), Expect(3) = 1e-022
Identities = 23/47 (48%), Positives = 28/47 (59%)
Frame = +3 / -1
Query: 615 GRARAVNEQRVPGEDANLDGVLGAKNLDQELQQLHLVRRRSHARHGV 755
G + +QRV E A+LD +LG +LDQ QQL LVR R H GV
Sbjct: 358 GERQRGGQQRVAREHAHLDRLLGPCHLDQHPQQLRLVRGRLHVTPGV 218
Score = 43.7 bits (89), Expect(3) = 2e-043
Identities = 20/40 (50%), Positives = 21/40 (52%)
Frame = -2 / +2
Query: 755 HPMAGMAASPDXXXXXXXXXXXLGAKNAIEVGVFTGYSLL 636
HP M +S D GAK IEVGVFTGYSLL
Sbjct: 218 HPWGYMQSSSDEAQLLGMLIKMAGAKKTIEVGVFTGYSLL 337
Score = 42.3 bits (86), Expect(3) = 2e-043
Identities = 17/22 (77%), Positives = 19/22 (86%)
Frame = -3 / +2
Query: 631 TALALPDDGKIVAIDVTRESYD 566
TALALP+DGKIVAID RE Y+
Sbjct: 341 TALALPEDGKIVAIDTDRECYE 406
Score = 24.9 bits (48), Expect(3) = 1e-022
Identities = 10/16 (62%), Positives = 13/16 (81%)
Frame = +2 / -1
Query: 566 VVALAGNVDGHNLAVV 613
+VAL VDGH+LAV+
Sbjct: 406 LVALTVGVDGHDLAVL 359
>gb|BF625981.2|BF625981 HVSMEa0015B13f Hordeum vulgare seedling shoot EST library
HVcDNA0001 (Cold stress) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEa0015B13f, mRNA sequence
Length = 706
Score = 127 bits (272), Expect(3) = 4e-043
Identities = 49/88 (55%), Positives = 66/88 (75%)
Frame = -3 / +2
Query: 565 QIGSPVIEKAGVAHKIDFRVGLALPVLDQMVSEEGNKGKFDFAFVDADKVNFLNYHERLL 386
++G P IEKAG+AHK+DFR G L L+++++E+ +DFAFVDADK N++ YHE+LL
Sbjct: 404 EVGRPFIEKAGMAHKVDFREGTGLERLEELLAEDDGAASYDFAFVDADKPNYVRYHEQLL 583
Query: 385 QLLRVGGLIAYDNTLWGGSVAAPHDEPL 302
+L+RVGG I DNTLWGG+VA PL
Sbjct: 584 RLVRVGGTIILDNTLWGGTVAPAGGHPL 667
Score = 70.3 bits (147), Expect(3) = 5e-022
Identities = 39/78 (50%), Positives = 41/78 (52%)
Frame = +3 / -2
Query: 327 TDPPHSVLS*AMRPPTLXXXXXXXW*LRKFTLSASTNAKSNLPLFPSSETIWSSTGSASP 506
T PP SVLS M PPT W* LSASTNAKS L SS S P
Sbjct: 642 TVPPQSVLSKMMVPPTRTSRSSCSW*RT*LGLSASTNAKS*LAAPSSSARSSSRRSRPVP 463
Query: 507 TRKSILCATPAFSITGDP 560
+RKS LCA PAFS+ G P
Sbjct: 462 SRKSTLCAMPAFSMKGRP 409
Score = 46.4 bits (95), Expect(3) = 5e-022
Identities = 23/47 (48%), Positives = 28/47 (59%)
Frame = +3 / -1
Query: 615 GRARAVNEQRVPGEDANLDGVLGAKNLDQELQQLHLVRRRSHARHGV 755
G + +QRV E A+LD +LG +LDQ QQL LVR R H GV
Sbjct: 358 GERQRGGQQRVAREHAHLDRLLGPCHLDQHPQQLRLVRGRLHVTPGV 218
Score = 43.7 bits (89), Expect(3) = 4e-043
Identities = 20/40 (50%), Positives = 21/40 (52%)
Frame = -2 / +2
Query: 755 HPMAGMAASPDXXXXXXXXXXXLGAKNAIEVGVFTGYSLL 636
HP M +S D GAK IEVGVFTGYSLL
Sbjct: 218 HPWGYMQSSSDEAQLLGMLIKMAGAKKTIEVGVFTGYSLL 337
Score = 42.3 bits (86), Expect(3) = 4e-043
Identities = 17/22 (77%), Positives = 19/22 (86%)
Frame = -3 / +2
Query: 631 TALALPDDGKIVAIDVTRESYD 566
TALALP+DGKIVAID RE Y+
Sbjct: 341 TALALPEDGKIVAIDTDRECYE 406
Score = 24.9 bits (48), Expect(3) = 5e-022
Identities = 10/16 (62%), Positives = 13/16 (81%)
Frame = +2 / -1
Query: 566 VVALAGNVDGHNLAVV 613
+VAL VDGH+LAV+
Sbjct: 406 LVALTVGVDGHDLAVL 359
>gb|BF259949.2|BF259949 HVSMEf0020L06f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEf0020L06f, mRNA sequence
Length = 807
Score = 127 bits (271), Expect(3) = 5e-043
Identities = 48/90 (53%), Positives = 68/90 (75%)
Frame = -3 / +3
Query: 565 QIGSPVIEKAGVAHKIDFRVGLALPVLDQMVSEEGNKGKFDFAFVDADKVNFLNYHERLL 386
++G P IEKAG+AHK+DFR G L L+++++E+ G +DFAFVDADK N++ YH++L+
Sbjct: 399 EVGRPFIEKAGMAHKVDFREGTGLERLEELLAEDDGAGSYDFAFVDADKPNYVRYHKQLV 578
Query: 385 QLLRVGGLIAYDNTLWGGSVAAPHDEPLSE 296
+ RVGG I YDNTLWGG+VA PL++
Sbjct: 579 AVGRVGGTIIYDNTLWGGTVALSAGTPLAD 668
Score = 78.0 bits (164), Expect(3) = 3e-024
Identities = 42/78 (53%), Positives = 44/78 (56%)
Frame = +3 / -3
Query: 327 TDPPHSVLS*AMRPPTLXXXXXXXW*LRKFTLSASTNAKSNLPLFPSSETIWSSTGSASP 506
T PP SVLS* M PPT W* LSASTNAKS LP SS S S P
Sbjct: 637 TVPPQSVLS*MMVPPTRPTATSCLW*RT*LGLSASTNAKS*LPAPSSSAXSSSRRSSPVP 458
Query: 507 TRKSILCATPAFSITGDP 560
+RKS LCA PAFS+ G P
Sbjct: 457 SRKSTLCAMPAFSMKGRP 404
Score = 46.4 bits (95), Expect(3) = 3e-024
Identities = 23/47 (48%), Positives = 28/47 (59%)
Frame = +3 / -2
Query: 615 GRARAVNEQRVPGEDANLDGVLGAKNLDQELQQLHLVRRRSHARHGV 755
G + +QRV E A+LD +LG +LDQ QQL LVR R H GV
Sbjct: 353 GERQRGGQQRVAREHAHLDRLLGPCHLDQHPQQLRLVRGRLHVTPGV 213
Score = 43.7 bits (89), Expect(3) = 5e-043
Identities = 20/40 (50%), Positives = 21/40 (52%)
Frame = -2 / +3
Query: 755 HPMAGMAASPDXXXXXXXXXXXLGAKNAIEVGVFTGYSLL 636
HP M +S D GAK IEVGVFTGYSLL
Sbjct: 213 HPWGYMQSSSDEAQLLGMLIKMAGAKKTIEVGVFTGYSLL 332
Score = 42.3 bits (86), Expect(3) = 5e-043
Identities = 17/22 (77%), Positives = 19/22 (86%)
Frame = -3 / +3
Query: 631 TALALPDDGKIVAIDVTRESYD 566
TALALP+DGKIVAID RE Y+
Sbjct: 336 TALALPEDGKIVAIDTDRECYE 401
Score = 24.9 bits (48), Expect(3) = 3e-024
Identities = 10/16 (62%), Positives = 13/16 (81%)
Frame = +2 / -2
Query: 566 VVALAGNVDGHNLAVV 613
+VAL VDGH+LAV+
Sbjct: 401 LVALTVGVDGHDLAVL 354
>gb|BI960325.1|BI960325 HVSMEn0024D19f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0024D19f, mRNA sequence
Length = 591
Score = 174 bits (374), Expect = 6e-043
Identities = 70/124 (56%), Positives = 85/124 (68%)
Frame = -3 / +1
Query: 553 PVIEKAGVAHKIDFRVGLALPVLDQMVSEEGNKGKFDFAFVDADKVNFLNYHERLLQLLR 374
P IEKAGVAHKIDFR G ALPVLD ++ +E N G FDF FVDADK N+LNYHERL++L++
Sbjct: 4 PCIEKAGVAHKIDFREGPALPVLDALLEDEANHGTFDFVFVDADKDNYLNYHERLMKLVK 183
Query: 373 VGGLIAYDNTLWGGSVAAPHDEPLSEXXXXXXXXXXXXXXXXXADPRVHVCQVAIADGLX 194
VGGL+ YDNTLW GSV P D P+ + AD RV +CQ+ + DG+
Sbjct: 184 VGGLLGYDNTLWNGSVVLPADAPMRKYIRYYRDFVLDLNKALAADQRVEICQLPVGDGIT 363
Query: 193 LCRR 182
LCRR
Sbjct: 364 LCRR 375
>gb|BU979082.1|BU979082 HA15B18r HA Hordeum vulgare subsp. vulgare cDNA clone HA15B18
5-PRIME, mRNA sequence
Length = 593
Score = 174 bits (374), Expect = 6e-043
Identities = 70/124 (56%), Positives = 85/124 (68%)
Frame = -3 / +2
Query: 553 PVIEKAGVAHKIDFRVGLALPVLDQMVSEEGNKGKFDFAFVDADKVNFLNYHERLLQLLR 374
P IEKAGVAHKIDFR G ALPVLD ++ +E N G FDF FVDADK N+LNYHERL++L++
Sbjct: 14 PCIEKAGVAHKIDFREGPALPVLDALLEDEANHGTFDFVFVDADKDNYLNYHERLMKLVK 193
Query: 373 VGGLIAYDNTLWGGSVAAPHDEPLSEXXXXXXXXXXXXXXXXXADPRVHVCQVAIADGLX 194
VGGL+ YDNTLW GSV P D P+ + AD RV +CQ+ + DG+
Sbjct: 194 VGGLLGYDNTLWNGSVVLPADAPMRKYIRYYRDFVLDLNKALAADQRVEICQLPVGDGIT 373
Query: 193 LCRR 182
LCRR
Sbjct: 374 LCRR 385
>gb|BU979265.1|BU979265 HA15J22r HA Hordeum vulgare subsp. vulgare cDNA clone HA15J22
5-PRIME, mRNA sequence
Length = 507
Score = 174 bits (374), Expect = 6e-043
Identities = 70/124 (56%), Positives = 85/124 (68%)
Frame = -3 / +2
Query: 553 PVIEKAGVAHKIDFRVGLALPVLDQMVSEEGNKGKFDFAFVDADKVNFLNYHERLLQLLR 374
P IEKAGVAHKIDFR G ALPVLD ++ +E N G FDF FVDADK N+LNYHERL++L++
Sbjct: 14 PCIEKAGVAHKIDFREGPALPVLDALLEDEANHGTFDFVFVDADKDNYLNYHERLMKLVK 193
Query: 373 VGGLIAYDNTLWGGSVAAPHDEPLSEXXXXXXXXXXXXXXXXXADPRVHVCQVAIADGLX 194
VGGL+ YDNTLW GSV P D P+ + AD RV +CQ+ + DG+
Sbjct: 194 VGGLLGYDNTLWNGSVVLPADAPMRKYIRYYRDFVLDLNKALAADQRVEICQLPVGDGIT 373
Query: 193 LCRR 182
LCRR
Sbjct: 374 LCRR 385
>gb|CB859935.1|CB859935 HI12A22w HI Hordeum vulgare subsp. vulgare cDNA clone HI12A22
3-PRIME, mRNA sequence
Length = 549
Score = 174 bits (374), Expect = 6e-043
Identities = 70/124 (56%), Positives = 85/124 (68%)
Frame = -3 / -2
Query: 553 PVIEKAGVAHKIDFRVGLALPVLDQMVSEEGNKGKFDFAFVDADKVNFLNYHERLLQLLR 374
P IEKAGVAHKIDFR G ALPVLD ++ +E N G FDF FVDADK N+LNYHERL++L++
Sbjct: 545 PCIEKAGVAHKIDFREGPALPVLDALLEDEANHGTFDFVFVDADKDNYLNYHERLMKLVK 366
Query: 373 VGGLIAYDNTLWGGSVAAPHDEPLSEXXXXXXXXXXXXXXXXXADPRVHVCQVAIADGLX 194
VGGL+ YDNTLW GSV P D P+ + AD RV +CQ+ + DG+
Sbjct: 365 VGGLLGYDNTLWNGSVVLPADAPMRKYIRYYRDFVLDLNKALAADQRVEICQLPVGDGIT 186
Query: 193 LCRR 182
LCRR
Sbjct: 185 LCRR 174
>gb|BI956791.1|BI956791 HVSMEn0005F21f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0005F21f, mRNA sequence
Length = 930
Score = 126 bits (270), Expect(3) = 7e-043
Identities = 47/83 (56%), Positives = 65/83 (78%)
Frame = -3 / +2
Query: 565 QIGSPVIEKAGVAHKIDFRVGLALPVLDQMVSEEGNKGKFDFAFVDADKVNFLNYHERLL 386
++G P IEKAG+AHK+DFR G L L+++++E+ +DFAFVDADK N++ YHE+LL
Sbjct: 407 EVGRPFIEKAGMAHKVDFREGTRLERLEELLAEDDGAASYDFAFVDADKPNYVRYHEQLL 586
Query: 385 QLLRVGGLIAYDNTLWGGSVAAP 317
+L+RVGG I YD+TLWGG+V P
Sbjct: 587 RLVRVGGTIIYDSTLWGGTVGLP 655
Score = 72.5 bits (152), Expect(3) = 1e-022
Identities = 40/78 (51%), Positives = 42/78 (53%)
Frame = +3 / -1
Query: 327 TDPPHSVLS*AMRPPTLXXXXXXXW*LRKFTLSASTNAKSNLPLFPSSETIWSSTGSASP 506
T PP SVLS* M PPT W* LSASTNAKS L SS S P
Sbjct: 645 TVPPQSVLS*MMVPPTRTSRSSCSW*RT*LGLSASTNAKS*LAAPSSSARSSSRRSRRVP 466
Query: 507 TRKSILCATPAFSITGDP 560
+RKS LCA PAFS+ G P
Sbjct: 465 SRKSTLCAMPAFSMKGRP 412
Score = 46.4 bits (95), Expect(3) = 1e-022
Identities = 23/47 (48%), Positives = 28/47 (59%)
Frame = +3 / -3
Query: 615 GRARAVNEQRVPGEDANLDGVLGAKNLDQELQQLHLVRRRSHARHGV 755
G + +QRV E A+LD +LG +LDQ QQL LVR R H GV
Sbjct: 361 GERQRGGQQRVAREHAHLDRLLGPCHLDQHPQQLRLVRGRLHVTPGV 221
Score = 43.7 bits (89), Expect(3) = 7e-043
Identities = 20/40 (50%), Positives = 21/40 (52%)
Frame = -2 / +2
Query: 755 HPMAGMAASPDXXXXXXXXXXXLGAKNAIEVGVFTGYSLL 636
HP M +S D GAK IEVGVFTGYSLL
Sbjct: 221 HPWGYMQSSSDEAQLLGMLIKMAGAKKTIEVGVFTGYSLL 340
Score = 42.3 bits (86), Expect(3) = 7e-043
Identities = 17/22 (77%), Positives = 19/22 (86%)
Frame = -3 / +2
Query: 631 TALALPDDGKIVAIDVTRESYD 566
TALALP+DGKIVAID RE Y+
Sbjct: 344 TALALPEDGKIVAIDTDRECYE 409
Score = 24.9 bits (48), Expect(3) = 1e-022
Identities = 10/16 (62%), Positives = 13/16 (81%)
Frame = +2 / -3
Query: 566 VVALAGNVDGHNLAVV 613
+VAL VDGH+LAV+
Sbjct: 409 LVALTVGVDGHDLAVL 362
>gb|BI957710.1|BI957710 HVSMEn0010N01f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0010N01f, mRNA sequence
Length = 638
Score = 126 bits (269), Expect(3) = 9e-043
Identities = 48/83 (57%), Positives = 65/83 (78%)
Frame = -3 / +1
Query: 565 QIGSPVIEKAGVAHKIDFRVGLALPVLDQMVSEEGNKGKFDFAFVDADKVNFLNYHERLL 386
++G P IEKAG+AHK DFR G L L+++++E+ +DFAFVDADK N++ YH++LL
Sbjct: 385 EVGRPFIEKAGMAHKGDFREGTGLERLEELLAEDDGAASYDFAFVDADKPNYVRYHKQLL 564
Query: 385 QLLRVGGLIAYDNTLWGGSVAAP 317
+L+RVGG I YDNTLWGG+VA P
Sbjct: 565 RLVRVGGTIIYDNTLWGGTVALP 633
Score = 71.2 bits (149), Expect(3) = 4e-022
Identities = 40/78 (51%), Positives = 42/78 (53%)
Frame = +3 / -1
Query: 327 TDPPHSVLS*AMRPPTLXXXXXXXW*LRKFTLSASTNAKSNLPLFPSSETIWSSTGSASP 506
T PP SVLS* M PPT W* LSASTNAKS L SS S P
Sbjct: 623 TVPPQSVLS*MMVPPTRTSRSSCLW*RT*LGLSASTNAKS*LAAPSSSARSSSRRSRPVP 444
Query: 507 TRKSILCATPAFSITGDP 560
+RKS LCA PAFS+ G P
Sbjct: 443 SRKSPLCAMPAFSMKGRP 390
Score = 46.0 bits (94), Expect(3) = 4e-022
Identities = 23/47 (48%), Positives = 28/47 (59%)
Frame = +3 / -3
Query: 615 GRARAVNEQRVPGEDANLDGVLGAKNLDQELQQLHLVRRRSHARHGV 755
G + +QRV E A+LD +LG +LDQ QQL LVR R H GV
Sbjct: 339 GERQRGGQQRVAREHAHLDRLLGPCHLDQHPQQLRLVRGRLHVPPGV 199
Score = 43.7 bits (89), Expect(3) = 9e-043
Identities = 20/40 (50%), Positives = 21/40 (52%)
Frame = -2 / +1
Query: 755 HPMAGMAASPDXXXXXXXXXXXLGAKNAIEVGVFTGYSLL 636
HP M +S D GAK IEVGVFTGYSLL
Sbjct: 199 HPWGYMQSSSDEAQLLGMLIKMAGAKKTIEVGVFTGYSLL 318
Score = 42.3 bits (86), Expect(3) = 9e-043
Identities = 17/22 (77%), Positives = 19/22 (86%)
Frame = -3 / +1
Query: 631 TALALPDDGKIVAIDVTRESYD 566
TALALP+DGKIVAID RE Y+
Sbjct: 322 TALALPEDGKIVAIDTDRECYE 387
Score = 24.9 bits (48), Expect(3) = 4e-022
Identities = 10/16 (62%), Positives = 13/16 (81%)
Frame = +2 / -3
Query: 566 VVALAGNVDGHNLAVV 613
+VAL VDGH+LAV+
Sbjct: 387 LVALTVGVDGHDLAVL 340
>gb|BF261040.2|BF261040 HVSMEf0023J16f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEf0023J16f, mRNA sequence
Length = 802
Score = 74.8 bits (157), Expect(5) = 4e-042
Identities = 29/42 (69%), Positives = 37/42 (88%)
Frame = -3 / +1
Query: 460 NKGKFDFAFVDADKVNFLNYHERLLQLLRVGGLIAYDNTLWG 335
++G FDFAFVDADK N+ +YHE+LL+L+RV GL+AYDNTL G
Sbjct: 526 DEGSFDFAFVDADKYNYGSYHEQLLRLVRVXGLLAYDNTLLG 651
Score = 56.5 bits (117), Expect(5) = 4e-042
Identities = 21/36 (58%), Positives = 30/36 (83%)
Frame = -3 / +1
Query: 571 YDQIGSPVIEKAGVAHKIDFRVGLALPVLDQMVSEE 464
Y +G PVI+KAGVAHK+DFR G A P+LD+++++E
Sbjct: 418 YFDLGLPVIKKAGVAHKVDFREGPAGPILDKLIADE 525
Score = 44.1 bits (90), Expect(5) = 5e-027
Identities = 24/48 (50%), Positives = 27/48 (56%)
Frame = +3 / -3
Query: 336 PHSVLS*AMRPPTLXXXXXXXW*LRKFTLSASTNAKSNLPLFPSSETI 479
P SVLS*A RP T W*L LSAST AKS LP S+ ++
Sbjct: 650 PKSVLS*ASRPXTRTSRSSCSW*LP*LYLSASTKAKSKLPSSSSAMSL 507
Score = 43.7 bits (89), Expect(5) = 4e-042
Identities = 16/22 (72%), Positives = 21/22 (95%)
Frame = -3 / +1
Query: 631 TALALPDDGKIVAIDVTRESYD 566
TALA+PDDG+I+AIDV+RE +D
Sbjct: 361 TALAIPDDGRIIAIDVSREYFD 426
Score = 43.2 bits (88), Expect(5) = 5e-027
Identities = 19/32 (59%), Positives = 21/32 (65%)
Frame = +3 / -3
Query: 465 SSETIWSSTGSASPTRKSILCATPAFSITGDP 560
SS S G A P+RKS LCATPAF +TG P
Sbjct: 524 SSAMSLSRMGPAGPSRKSTLCATPAFLMTGRP 429
Score = 41.8 bits (85), Expect(5) = 5e-027
Identities = 18/30 (60%), Positives = 22/30 (73%)
Frame = +3 / -2
Query: 651 GEDANLDGVLGAKNLDQELQQLHLVRRRSH 740
G D +LDG LGA +L+Q+ QQ LVRRR H
Sbjct: 342 GVDPHLDGPLGAHHLEQQRQQQPLVRRRRH 253
Score = 35.4 bits (71), Expect(5) = 4e-042
Identities = 19/45 (42%), Positives = 23/45 (51%)
Frame = -1 / +3
Query: 339 GAGPWPRPTTNRSPSGTARSLRPPGSSTRPWPPIPAFTSARSPSP 205
GAG PTT RS TAR+ P G ST P PA+ + +P
Sbjct: 648 GAGLLSCPTTRRSRRKTARNRTPSGGSTP*SPSTPAWEPGQFLTP 782
Score = 34.5 bits (69), Expect(5) = 4e-042
Identities = 16/40 (40%), Positives = 21/40 (52%)
Frame = -2 / +1
Query: 755 HPMAGMAASPDXXXXXXXXXXXLGAKNAIEVGVFTGYSLL 636
H M++ PD +GAK IEVGV+TG S+L
Sbjct: 238 HIFGFMSSPPDEGLLLSLLLKVMGAKRTIEVGVYTGCSVL 357
Score = 33.1 bits (66), Expect(5) = 5e-027
Identities = 17/38 (44%), Positives = 22/38 (57%)
Frame = +2 / -1
Query: 230 NAGIGGHGRVELPGGRSERAVPLGERFVVGRGHGPAPQ 343
+AG+ G VE P G AV L +R VVG + PAP+
Sbjct: 757 HAGVDGDQGVEPPDGVRFLAVFLRDRRVVGHDNSPAPK 644
Score = 30.4 bits (60), Expect(5) = 5e-027
Identities = 15/25 (60%), Positives = 16/25 (64%)
Frame = +3 / -3
Query: 576 SRVTSMATILPSSGRARAVNEQRVP 650
S +TSMA ILPSSG A AV P
Sbjct: 416 SLLTSMAMILPSSGMASAVVRTEQP 342
>gb|AL504625.1|AL504625 AL504625 Hordeum vulgare Barke roots Hordeum vulgare subsp. vulgare
cDNA clone HW05N15V 5', mRNA sequence
Length = 666
Score = 122 bits (260), Expect(3) = 1e-041
Identities = 46/82 (56%), Positives = 63/82 (76%)
Frame = -3 / +2
Query: 565 QIGSPVIEKAGVAHKIDFRVGLALPVLDQMVSEEGNKGKFDFAFVDADKVNFLNYHERLL 386
++G P IEKAG+AHK+DFR G L L+++++E+ +DFAFVDADK N++ YHE+LL
Sbjct: 398 EVGRPFIEKAGMAHKVDFREGTGLERLEELLAEDDGAASYDFAFVDADKPNYVRYHEQLL 577
Query: 385 QLLRVGGLIAYDNTLWGGSVAA 320
+ +RV G I YDNTLWGG+V A
Sbjct: 578 RXVRVCGTIIYDNTLWGGTVVA 643
Score = 68.4 bits (143), Expect(3) = 2e-021
Identities = 40/78 (51%), Positives = 42/78 (53%)
Frame = +3 / -1
Query: 327 TDPPHSVLS*AMRPPTLXXXXXXXW*LRKFTLSASTNAKSNLPLFPSSETIWSSTGSASP 506
T PP SVLS* M P T W* LSASTNAKS L SS S P
Sbjct: 636 TVPPQSVLS*MMVPQTRTXRSSCSW*RT*LGLSASTNAKS*LAAPSSSARSSSRRSRPVP 457
Query: 507 TRKSILCATPAFSITGDP 560
+RKS LCA PAFS+ G P
Sbjct: 456 SRKSTLCAMPAFSMKGRP 403
Score = 46.4 bits (95), Expect(3) = 2e-021
Identities = 23/47 (48%), Positives = 28/47 (59%)
Frame = +3 / -3
Query: 615 GRARAVNEQRVPGEDANLDGVLGAKNLDQELQQLHLVRRRSHARHGV 755
G + +QRV E A+LD +LG +LDQ QQL LVR R H GV
Sbjct: 352 GERQRGGQQRVAREHAHLDRLLGPCHLDQHPQQLRLVRGRLHVTPGV 212
Score = 43.7 bits (89), Expect(3) = 1e-041
Identities = 20/40 (50%), Positives = 21/40 (52%)
Frame = -2 / +2
Query: 755 HPMAGMAASPDXXXXXXXXXXXLGAKNAIEVGVFTGYSLL 636
HP M +S D GAK IEVGVFTGYSLL
Sbjct: 212 HPWGYMQSSSDEAQLLGMLIKMAGAKKTIEVGVFTGYSLL 331
Score = 42.3 bits (86), Expect(3) = 1e-041
Identities = 17/22 (77%), Positives = 19/22 (86%)
Frame = -3 / +2
Query: 631 TALALPDDGKIVAIDVTRESYD 566
TALALP+DGKIVAID RE Y+
Sbjct: 335 TALALPEDGKIVAIDTDRECYE 400
Score = 24.9 bits (48), Expect(3) = 2e-021
Identities = 10/16 (62%), Positives = 13/16 (81%)
Frame = +2 / -3
Query: 566 VVALAGNVDGHNLAVV 613
+VAL VDGH+LAV+
Sbjct: 400 LVALTVGVDGHDLAVL 353
>gb|BI960119.1|BI960119 HVSMEn0023E19f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0023E19f, mRNA sequence
Length = 647
Score = 121 bits (259), Expect(3) = 2e-041
Identities = 45/79 (56%), Positives = 62/79 (78%)
Frame = -3 / +3
Query: 565 QIGSPVIEKAGVAHKIDFRVGLALPVLDQMVSEEGNKGKFDFAFVDADKVNFLNYHERLL 386
++G P IEKAG+AHK+DFR G L L+++++E+ +DFAFVDADK N++ YHE+LL
Sbjct: 411 EVGRPFIEKAGMAHKVDFREGTGLERLEELLAEDDGAASYDFAFVDADKPNYVRYHEQLL 590
Query: 385 QLLRVGGLIAYDNTLWGGS 329
+L+RV G I YDNTLWGG+
Sbjct: 591 RLVRVXGTIIYDNTLWGGT 647
Score = 67.5 bits (141), Expect(3) = 3e-021
Identities = 38/76 (50%), Positives = 40/76 (52%)
Frame = +3 / -2
Query: 333 PPHSVLS*AMRPPTLXXXXXXXW*LRKFTLSASTNAKSNLPLFPSSETIWSSTGSASPTR 512
PP SVLS* M P T W* LSASTNAKS L SS S P+R
Sbjct: 643 PPQSVLS*MMVPXTRTSRSSCSW*RT*LGLSASTNAKS*LAAPSSSARSSSRRSRPVPSR 464
Query: 513 KSILCATPAFSITGDP 560
KS LCA PAFS+ G P
Sbjct: 463 KSTLCAMPAFSMKGRP 416
Score = 46.4 bits (95), Expect(3) = 3e-021
Identities = 23/47 (48%), Positives = 28/47 (59%)
Frame = +3 / -1
Query: 615 GRARAVNEQRVPGEDANLDGVLGAKNLDQELQQLHLVRRRSHARHGV 755
G + +QRV E A+LD +LG +LDQ QQL LVR R H GV
Sbjct: 365 GERQRGGQQRVAREHAHLDRLLGPCHLDQHPQQLRLVRGRLHVTPGV 225
Score = 43.7 bits (89), Expect(3) = 2e-041
Identities = 20/40 (50%), Positives = 21/40 (52%)
Frame = -2 / +3
Query: 755 HPMAGMAASPDXXXXXXXXXXXLGAKNAIEVGVFTGYSLL 636
HP M +S D GAK IEVGVFTGYSLL
Sbjct: 225 HPWGYMQSSSDEAQLLGMLIKMAGAKKTIEVGVFTGYSLL 344
Score = 42.3 bits (86), Expect(3) = 2e-041
Identities = 17/22 (77%), Positives = 19/22 (86%)
Frame = -3 / +3
Query: 631 TALALPDDGKIVAIDVTRESYD 566
TALALP+DGKIVAID RE Y+
Sbjct: 348 TALALPEDGKIVAIDTDRECYE 413
Score = 24.9 bits (48), Expect(3) = 3e-021
Identities = 10/16 (62%), Positives = 13/16 (81%)
Frame = +2 / -1
Query: 566 VVALAGNVDGHNLAVV 613
+VAL VDGH+LAV+
Sbjct: 413 LVALTVGVDGHDLAVL 366
>gb|BG415448.2|BG415448 HVSMEk0006I14f Hordeum vulgare testa/pericarp EST library
HVcDNA0013 (normal) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEk0006I14f, mRNA sequence
Length = 634
Score = 100 bits (213), Expect(4) = 2e-041
Identities = 37/55 (67%), Positives = 49/55 (89%)
Frame = -3 / +2
Query: 460 NKGKFDFAFVDADKVNFLNYHERLLQLLRVGGLIAYDNTLWGGSVAAPHDEPLSE 296
++G FDFAFVDADK N+ +YHE+LL+L+RVGG++AYDNTLWGG+V+ P D PL+E
Sbjct: 170 DEGSFDFAFVDADKYNYGSYHEQLLRLVRVGGVLAYDNTLWGGTVSMPDDTPLTE 334
Score = 56.5 bits (117), Expect(4) = 2e-041
Identities = 21/36 (58%), Positives = 30/36 (83%)
Frame = -3 / +2
Query: 571 YDQIGSPVIEKAGVAHKIDFRVGLALPVLDQMVSEE 464
Y +G PVI+KAGVAHK+DFR G A P+LD+++++E
Sbjct: 62 YFDLGLPVIKKAGVAHKVDFREGPAGPILDKLIADE 169
Score = 43.7 bits (89), Expect(4) = 2e-041
Identities = 16/22 (72%), Positives = 21/22 (95%)
Frame = -3 / +2
Query: 631 TALALPDDGKIVAIDVTRESYD 566
TALA+PDDG+I+AIDV+RE +D
Sbjct: 5 TALAIPDDGRIIAIDVSREYFD 70
Score = 24.4 bits (47), Expect(4) = 2e-041
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = -3 / +2
Query: 241 DPRVHVCQVAIADGLXLCRRV 179
DPRV I DGL L RV
Sbjct: 389 DPRVEPVHXPIVDGLTLLPRV 451
>gb|BI957460.1|BI957460 HVSMEn0009L10f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0009L10f, mRNA sequence
Length = 653
Score = 121 bits (258), Expect(3) = 3e-041
Identities = 45/81 (55%), Positives = 64/81 (79%)
Frame = -3 / +2
Query: 565 QIGSPVIEKAGVAHKIDFRVGLALPVLDQMVSEEGNKGKFDFAFVDADKVNFLNYHERLL 386
++G P IEKAG+AHK+DFR G L L+++++E+ +DFAFVDADK N++ YHE+LL
Sbjct: 410 EVGRPFIEKAGMAHKVDFREGTGLERLEELLAEDDGAASYDFAFVDADKPNYVRYHEQLL 589
Query: 385 QLLRVGGLIAYDNTLWGGSVA 323
+L+RV G I Y++TLWGG+VA
Sbjct: 590 RLVRVXGTIIYEHTLWGGTVA 652
Score = 43.7 bits (89), Expect(3) = 3e-041
Identities = 20/40 (50%), Positives = 21/40 (52%)
Frame = -2 / +2
Query: 755 HPMAGMAASPDXXXXXXXXXXXLGAKNAIEVGVFTGYSLL 636
HP M +S D GAK IEVGVFTGYSLL
Sbjct: 224 HPWGYMQSSSDEAQLLGMLIKMAGAKKTIEVGVFTGYSLL 343
Score = 42.3 bits (86), Expect(3) = 3e-041
Identities = 17/22 (77%), Positives = 19/22 (86%)
Frame = -3 / +2
Query: 631 TALALPDDGKIVAIDVTRESYD 566
TALALP+DGKIVAID RE Y+
Sbjct: 347 TALALPEDGKIVAIDTDRECYE 412
>gb|BF630555.2|BF630555 HVSMEb0011I21f Hordeum vulgare seedling shoot EST library
HVcDNA0002 (Dehydration stress) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEb0011I21f, mRNA sequence
Length = 736
Score = 79.0 bits (166), Expect(4) = 8e-041
Identities = 30/41 (73%), Positives = 36/41 (87%)
Frame = -3 / +1
Query: 448 FDFAFVDADKVNFLNYHERLLQLLRVGGLIAYDNTLWGGSV 326
FDF FVDADK N+LNYHERL++L++VGGL+ YDNTL GSV
Sbjct: 610 FDFVFVDADKDNYLNYHERLMKLVKVGGLLGYDNTLLNGSV 732
Score = 65.2 bits (136), Expect(4) = 8e-041
Identities = 26/40 (65%), Positives = 32/40 (80%)
Frame = -3 / +3
Query: 565 QIGSPVIEKAGVAHKIDFRVGLALPVLDQMVSEEGNKGKF 446
++G P IEKAGVAHKIDFR G ALPVLD ++ +EG+ G F
Sbjct: 492 ELGLPCIEKAGVAHKIDFREGPALPVLDALLEDEGHHGTF 611
Score = 57.0 bits (118), Expect(4) = 5e-027
Identities = 24/37 (64%), Positives = 28/37 (75%)
Frame = +3 / -1
Query: 450 LPLFPSSETIWSSTGSASPTRKSILCATPAFSITGDP 560
+P +PSS S TGSA P+RKSILCATPAFS+ G P
Sbjct: 607 VPWWPSSSRRASRTGSAGPSRKSILCATPAFSMHGSP 497
Score = 44.6 bits (91), Expect(4) = 5e-027
Identities = 22/40 (55%), Positives = 24/40 (60%)
Frame = +3 / -3
Query: 327 TDPPHSVLS*AMRPPTLXXXXXXXW*LRKFTLSASTNAKS 446
T+P VLS* RPPTL W*LR +LSAST KS
Sbjct: 731 TEPFKRVLS*PRRPPTLTSFMRRSW*LR*LSLSASTKTKS 612
Score = 43.7 bits (89), Expect(4) = 5e-027
Identities = 19/35 (54%), Positives = 25/35 (71%)
Frame = +3 / -3
Query: 636 EQRVPGEDANLDGVLGAKNLDQELQQLHLVRRRSH 740
EQ V DA+L G+LGA L+Q +++L LVRRR H
Sbjct: 425 EQGVARVDADLHGLLGADELEQHVEELALVRRRRH 321
Score = 40.5 bits (82), Expect(4) = 8e-041
Identities = 14/22 (63%), Positives = 20/22 (90%)
Frame = -3 / +3
Query: 631 TALALPDDGKIVAIDVTRESYD 566
TALA+PDDG I+A+D+ RE+Y+
Sbjct: 429 TALAIPDDGTILAMDINRENYE 494
Score = 38.6 bits (78), Expect(4) = 8e-041
Identities = 18/47 (38%), Positives = 23/47 (48%)
Frame = -2 / +3
Query: 776 IRHEHRTHPMAGMAASPDXXXXXXXXXXXLGAKNAIEVGVFTGYSLL 636
+R HP M S D +GAK +E+GV+TGYSLL
Sbjct: 285 LREITANHPWNLMTTSADEGQFLNMLLKLIGAKKTMEIGVYTGYSLL 425
Score = 30.9 bits (61), Expect(4) = 5e-027
Identities = 15/28 (53%), Positives = 19/28 (67%)
Frame = +3 / -1
Query: 567 S*LSRVTSMATILPSSGRARAVNEQRVP 650
S* SR+ SMA ++PSSG A AV + P
Sbjct: 493 S*FSRLMSMAKMVPSSGMASAVASRE*P 410
Database: Hordeum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:16 PM
Number of letters in database: 175,134,539
Number of sequences in database: 312,970
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 345,351,168
Number of Sequences: 312970
Number of extensions: 5705859
Number of successful extensions: 150795
Number of sequences better than 1.0e-020: 168
length of database: 58,378,179
effective HSP length: 52
effective length of database: 42,103,739
effective search space used: 9262822580
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)