TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2550132.2.1
(603 letters)
Database: Hordeum_nucl_with_EST.fasta
312,970 sequences; 175,134,539 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BJ456291.1|BJ456291 BJ456291 K. Sato unpublished cDNA li... 185 5e-056
gb|BJ448569.1|BJ448569 BJ448569 K. Sato unpublished cDNA li... 185 5e-056
gb|AV929175.1|AV929175 AV929175 K. Sato unpublished cDNA li... 185 5e-056
gb|AV917894.1|AV917894 AV917894 K. Sato unpublished cDNA li... 185 5e-056
gb|CA000617.1|CA000617 HS07N10u HS Hordeum vulgare subsp. v... 185 5e-056
gb|BU981973.1|BU981973 HA25C12r HA Hordeum vulgare subsp. v... 182 3e-053
gb|CA015545.1|CA015545 HT14K09r HT Hordeum vulgare subsp. v... 185 7e-052
gb|BI948988.1|BI948988 HVSMEl0011N01f Hordeum vulgare spike... 196 8e-050
gb|BU984313.1|BU984313 HF03J09r HF Hordeum vulgare subsp. v... 164 1e-049
gb|BQ464230.1|BQ464230 HF01L06T HF Hordeum vulgare subsp. v... 186 1e-046
gb|CA009784.1|CA009784 HT12M08u HT Hordeum vulgare subsp. v... 185 2e-046
gb|CA021407.1|CA021407 HZ40A05r HZ Hordeum vulgare subsp. v... 147 5e-044
gb|BF260792.2|BF260792 HVSMEf0022P08f Hordeum vulgare seedl... 121 2e-042
gb|BQ659782.1|BQ659782 HF01L06w HF Hordeum vulgare subsp. v... 169 1e-041
gb|BQ761582.1|BQ761582 EBem10_SQ001_N02_R embryo, 2 Day ger... 165 2e-040
gb|BF253896.2|BF253896 HVSMEf0002G19f Hordeum vulgare seedl... 121 9e-039
dbj|AB055519.1| Hordeum vulgare mRNA for mitochondrial alde... 141 6e-038
gb|BM815988.1|BM815988 HC108H09_SK.ab1 HC Hordeum vulgare s... 141 6e-038
gb|BF267540.2|BF267540 HV_CEa0018D16f Hordeum vulgare seedl... 141 6e-038
gb|BJ544525.1|BJ544525 BJ544525 K. Sato unpublished cDNA li... 141 6e-038
gb|BJ544355.1|BJ544355 BJ544355 K. Sato unpublished cDNA li... 141 6e-038
gb|BU972798.1|BU972798 HB22L24r BC Hordeum vulgare subsp. v... 141 6e-038
gb|BI776695.2|BI776695 EBpi07_SQ001_H11_R pistil, 12 DPA, n... 141 1e-036
gb|BQ466268.1|BQ466268 HT02B02r HT Hordeum vulgare subsp. v... 151 3e-036
gb|AV913129.1|AV913129 AV913129 K. Sato unpublished cDNA li... 117 7e-036
gb|CV060332.1|CV060332 BNEL57a10 Barley EST endosperm libra... 146 8e-035
gb|BI949913.1|BI949913 HVSMEl0016O20f Hordeum vulgare spike... 130 8e-035
gb|BF267588.2|BF267588 HV_CEa0018F16f Hordeum vulgare seedl... 92 2e-034
gb|BJ545810.1|BJ545810 BJ545810 K. Sato unpublished cDNA li... 141 3e-034
gb|AV921807.1|AV921807 AV921807 K. Sato unpublished cDNA li... 141 4e-033
gb|BJ545985.1|BJ545985 BJ545985 K. Sato unpublished cDNA li... 141 4e-033
gb|BJ548158.1|BJ548158 BJ548158 K. Sato unpublished cDNA li... 141 4e-033
gb|AW983019.2|AW983019 HVSMEg0004N09f Hordeum vulgare pre-a... 138 3e-032
gb|BF260313.2|BF260313 HVSMEf0021K17f Hordeum vulgare seedl... 96 2e-031
dbj|AB063179.1| Hordeum vulgare BBD1 mRNA for betaine aldeh... 111 5e-030
gb|BJ548794.1|BJ548794 BJ548794 K. Sato unpublished cDNA li... 127 7e-029
dbj|AB063178.1| Hordeum vulgare BBD2 mRNA for betaine aldeh... 81 2e-028
gb|BG368878.2|BG368878 HVSMEi0021B19f Hordeum vulgare 20 DA... 81 2e-028
gb|BJ468318.1|BJ468318 BJ468318 K. Sato unpublished cDNA li... 81 2e-028
gb|BJ475971.1|BJ475971 BJ475971 K. Sato unpublished cDNA li... 81 2e-028
gb|BJ466421.1|BJ466421 BJ466421 K. Sato unpublished cDNA li... 81 2e-028
gb|BJ471121.1|BJ471121 BJ471121 K. Sato unpublished cDNA li... 81 2e-028
gb|BM371740.2|BM371740 EBma08_SQ003_M14_R maternal, 28 DPA,... 81 2e-028
gb|BU975354.1|BU975354 HB30O13r BC Hordeum vulgare subsp. v... 81 6e-027
gb|AV931272.1|AV931272 AV931272 K. Sato unpublished cDNA li... 117 6e-026
gb|BJ473517.1|BJ473517 BJ473517 K. Sato unpublished cDNA li... 81 9e-026
gb|BG299265.1|BG299265 HVSMEa0019A19f Hordeum vulgare seedl... 81 4e-025
gb|BM371235.1|BM371235 EBro04_SQ003_O18_R root, 3 week, sal... 113 7e-025
gb|AL501734.1|AL501734 AL501734 Hordeum vulgare Barke roots... 100 1e-024
gb|BJ545493.1|BJ545493 BJ545493 K. Sato unpublished cDNA li... 110 7e-024
gb|BQ767898.1|BQ767898 EBro08_SQ010_K04_R root, 3 week, dro... 81 6e-023
gb|BU986428.1|BU986428 HF11M21r HF Hordeum vulgare subsp. v... 81 1e-022
gb|BF266942.2|BF266942 HV_CEa0016I01f Hordeum vulgare seedl... 85 3e-021
gb|BJ475564.1|BJ475564 BJ475564 K. Sato unpublished cDNA li... 76 4e-021
gb|CV060030.1|CV060030 BNEL53f12 Barley EST endosperm libra... 76 4e-021
gb|AV832590.1|AV832590 AV832590 K. Sato unpublished cDNA li... 74 9e-021
gb|BU988051.1|BU988051 HF16I12r HF Hordeum vulgare subsp. v... 100 1e-020
>gb|BJ456291.1|BJ456291 BJ456291 K. Sato unpublished cDNA library, cv. Akashinriki
vegetative stage leaves Hordeum vulgare subsp. vulgare
cDNA clone baak20g24 3', mRNA sequence
Length = 706
Score = 185 bits (398), Expect(2) = 5e-056
Identities = 78/126 (61%), Positives = 90/126 (71%)
Frame = -1 / -3
Query: 471 KGYYIEPTVFTNVKEDMIIAKEEIFGPVMCLMKFKPVEEAIARANDTRYGLGAGVVTRDL 292
KGYYIEP +FT+VK+DM IA+EEIFGPVM LMKFK +EE I +AN TRYGL AGVVT+++
Sbjct: 443 KGYYIEPAIFTDVKDDMSIAQEEIFGPVMALMKFKTMEEVIQKANSTRYGLAAGVVTKNI 264
Query: 291 DXXXXXXXXXXXXXXXXNCYFAMGSDCPFGGRKMSGFGKDEGMHALDKYLAVKSVVTPLR 112
D NCYFA D PFGG KMSGFGKD G ALDKYL K+VVTPL
Sbjct: 263 DTMNTVSRSVRSGVVWVNCYFAFDPDAPFGGCKMSGFGKDMGTDALDKYLHTKTVVTPLY 84
Query: 111 ASPWI* 94
+PW+*
Sbjct: 83 NTPWL* 66
Score = 155 bits (332), Expect(2) = 5e-043
Identities = 78/130 (60%), Positives = 87/130 (66%)
Frame = +2 / +1
Query: 80 EIKENQIQGEARSGVTTDLTARYLSSACMPSSLPKPLILRPPKGQSLPMAK*QFTHTTPA 259
+++ + QG SGVTT L RYLS A +P SLPKPLIL+PP G S AK*Q T TTP
Sbjct: 52 DVRPDHNQGVL*SGVTTVLVCRYLSRASVPMSLPKPLILQPPNGASGSKAK*QLTQTTPD 231
Query: 260 RTDLTTRFATSRSRVTTPAPSPYRVSFALAIASSTGLNFIRHMTGPKISSFAMIMSSLTL 439
TD T F S VTTPA PYRV FA I SS LNF+R +TGPKISS A+ MSSLT
Sbjct: 232 LTDRDTVFMVSMFLVTTPAARPYRVLFAF*ITSSIVLNFMRAITGPKISSCAIDMSSLTS 411
Query: 440 VKTVGSM**P 469
VK GSM**P
Sbjct: 412 VKMAGSM**P 441
Score = 52.4 bits (108), Expect(2) = 5e-056
Identities = 21/32 (65%), Positives = 24/32 (75%)
Frame = -1 / -3
Query: 567 KAQYERVLSYIGHGKREGATLLTGGRPCGPEG 472
K QYE+VL YI GK EGATLLTGG+ C +G
Sbjct: 533 KNQYEKVLKYIDVGKSEGATLLTGGKACSDKG 438
Score = 39.1 bits (79), Expect(2) = 5e-043
Identities = 19/32 (59%), Positives = 19/32 (59%)
Frame = +2 / +1
Query: 473 PSGPHGLPPVKRVAPSRLPWPM*LRTLSY*AL 568
P PPV RVAPS LP M LRT SY* L
Sbjct: 439 PLSLQAFPPVSRVAPSLLPTSMYLRTFSY*FL 534
>gb|BJ448569.1|BJ448569 BJ448569 K. Sato unpublished cDNA library, cv. Akashinriki
vegetative stage leaves Hordeum vulgare subsp. vulgare
cDNA clone baak20g24 5', mRNA sequence
Length = 670
Score = 185 bits (398), Expect(2) = 5e-056
Identities = 78/126 (61%), Positives = 90/126 (71%)
Frame = -1 / +2
Query: 471 KGYYIEPTVFTNVKEDMIIAKEEIFGPVMCLMKFKPVEEAIARANDTRYGLGAGVVTRDL 292
KGYYIEP +FT+VK+DM IA+EEIFGPVM LMKFK +EE I +AN TRYGL AGVVT+++
Sbjct: 263 KGYYIEPAIFTDVKDDMSIAQEEIFGPVMALMKFKTMEEVIQKANSTRYGLAAGVVTKNI 442
Query: 291 DXXXXXXXXXXXXXXXXNCYFAMGSDCPFGGRKMSGFGKDEGMHALDKYLAVKSVVTPLR 112
D NCYFA D PFGG KMSGFGKD G ALDKYL K+VVTPL
Sbjct: 443 DTMNTVSRSVRSGVVWVNCYFAFDPDAPFGGCKMSGFGKDMGTDALDKYLHTKTVVTPLY 622
Query: 111 ASPWI* 94
+PW+*
Sbjct: 623 NTPWL* 640
Score = 155 bits (332), Expect(2) = 5e-043
Identities = 78/130 (60%), Positives = 87/130 (66%)
Frame = +2 / -2
Query: 80 EIKENQIQGEARSGVTTDLTARYLSSACMPSSLPKPLILRPPKGQSLPMAK*QFTHTTPA 259
+++ + QG SGVTT L RYLS A +P SLPKPLIL+PP G S AK*Q T TTP
Sbjct: 654 DVRPDHNQGVL*SGVTTVLVCRYLSRASVPMSLPKPLILQPPNGASGSKAK*QLTQTTPD 475
Query: 260 RTDLTTRFATSRSRVTTPAPSPYRVSFALAIASSTGLNFIRHMTGPKISSFAMIMSSLTL 439
TD T F S VTTPA PYRV FA I SS LNF+R +TGPKISS A+ MSSLT
Sbjct: 474 LTDRDTVFMVSMFLVTTPAARPYRVLFAF*ITSSIVLNFMRAITGPKISSCAIDMSSLTS 295
Query: 440 VKTVGSM**P 469
VK GSM**P
Sbjct: 294 VKMAGSM**P 265
Score = 52.4 bits (108), Expect(2) = 5e-056
Identities = 21/32 (65%), Positives = 24/32 (75%)
Frame = -1 / +2
Query: 567 KAQYERVLSYIGHGKREGATLLTGGRPCGPEG 472
K QYE+VL YI GK EGATLLTGG+ C +G
Sbjct: 173 KNQYEKVLKYIDVGKSEGATLLTGGKACSDKG 268
Score = 39.1 bits (79), Expect(2) = 5e-043
Identities = 19/32 (59%), Positives = 19/32 (59%)
Frame = +2 / -2
Query: 473 PSGPHGLPPVKRVAPSRLPWPM*LRTLSY*AL 568
P PPV RVAPS LP M LRT SY* L
Sbjct: 267 PLSLQAFPPVSRVAPSLLPTSMYLRTFSY*FL 172
>gb|AV929175.1|AV929175 AV929175 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp.
vulgare cDNA clone basd11e16 3', mRNA sequence
Length = 636
Score = 185 bits (398), Expect(2) = 5e-056
Identities = 78/126 (61%), Positives = 90/126 (71%)
Frame = -1 / -3
Query: 471 KGYYIEPTVFTNVKEDMIIAKEEIFGPVMCLMKFKPVEEAIARANDTRYGLGAGVVTRDL 292
KGYYIEP +FT+VK+DM IA+EEIFGPVM LMKFK +EE I +AN TRYGL AGVVT+++
Sbjct: 502 KGYYIEPAIFTDVKDDMSIAQEEIFGPVMALMKFKTMEEVIQKANSTRYGLAAGVVTKNI 323
Query: 291 DXXXXXXXXXXXXXXXXNCYFAMGSDCPFGGRKMSGFGKDEGMHALDKYLAVKSVVTPLR 112
D NCYFA D PFGG KMSGFGKD G ALDKYL K+VVTPL
Sbjct: 322 DTMNTVSRSVRSGVVWVNCYFAFDPDAPFGGCKMSGFGKDMGTDALDKYLHTKTVVTPLY 143
Query: 111 ASPWI* 94
+PW+*
Sbjct: 142 NTPWL* 125
Score = 155 bits (332), Expect(2) = 5e-043
Identities = 78/130 (60%), Positives = 87/130 (66%)
Frame = +2 / +3
Query: 80 EIKENQIQGEARSGVTTDLTARYLSSACMPSSLPKPLILRPPKGQSLPMAK*QFTHTTPA 259
+++ + QG SGVTT L RYLS A +P SLPKPLIL+PP G S AK*Q T TTP
Sbjct: 111 DVRPDHNQGVL*SGVTTVLVCRYLSRASVPMSLPKPLILQPPNGASGSKAK*QLTQTTPD 290
Query: 260 RTDLTTRFATSRSRVTTPAPSPYRVSFALAIASSTGLNFIRHMTGPKISSFAMIMSSLTL 439
TD T F S VTTPA PYRV FA I SS LNF+R +TGPKISS A+ MSSLT
Sbjct: 291 LTDRDTVFMVSMFLVTTPAARPYRVLFAF*ITSSIVLNFMRAITGPKISSCAIDMSSLTS 470
Query: 440 VKTVGSM**P 469
VK GSM**P
Sbjct: 471 VKMAGSM**P 500
Score = 52.4 bits (108), Expect(2) = 5e-056
Identities = 21/32 (65%), Positives = 24/32 (75%)
Frame = -1 / -3
Query: 567 KAQYERVLSYIGHGKREGATLLTGGRPCGPEG 472
K QYE+VL YI GK EGATLLTGG+ C +G
Sbjct: 592 KNQYEKVLKYIDVGKSEGATLLTGGKACSDKG 497
Score = 39.1 bits (79), Expect(2) = 5e-043
Identities = 19/32 (59%), Positives = 19/32 (59%)
Frame = +2 / +3
Query: 473 PSGPHGLPPVKRVAPSRLPWPM*LRTLSY*AL 568
P PPV RVAPS LP M LRT SY* L
Sbjct: 498 PLSLQAFPPVSRVAPSLLPTSMYLRTFSY*FL 593
>gb|AV917894.1|AV917894 AV917894 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags11p17 3', mRNA sequence
Length = 614
Score = 185 bits (398), Expect(2) = 5e-056
Identities = 78/126 (61%), Positives = 90/126 (71%)
Frame = -1 / -2
Query: 471 KGYYIEPTVFTNVKEDMIIAKEEIFGPVMCLMKFKPVEEAIARANDTRYGLGAGVVTRDL 292
KGYYIEP +FT+VK+DM IA+EEIFGPVM LMKFK +EE I +AN TRYGL AGVVT+++
Sbjct: 445 KGYYIEPAIFTDVKDDMSIAQEEIFGPVMALMKFKTMEEVIQKANSTRYGLAAGVVTKNI 266
Query: 291 DXXXXXXXXXXXXXXXXNCYFAMGSDCPFGGRKMSGFGKDEGMHALDKYLAVKSVVTPLR 112
D NCYFA D PFGG KMSGFGKD G ALDKYL K+VVTPL
Sbjct: 265 DTMNTVSRSVRSGVVWVNCYFAFDPDAPFGGCKMSGFGKDMGTDALDKYLHTKTVVTPLY 86
Query: 111 ASPWI* 94
+PW+*
Sbjct: 85 NTPWL* 68
Score = 155 bits (332), Expect(2) = 5e-043
Identities = 78/130 (60%), Positives = 87/130 (66%)
Frame = +2 / +3
Query: 80 EIKENQIQGEARSGVTTDLTARYLSSACMPSSLPKPLILRPPKGQSLPMAK*QFTHTTPA 259
+++ + QG SGVTT L RYLS A +P SLPKPLIL+PP G S AK*Q T TTP
Sbjct: 54 DVRPDHNQGVL*SGVTTVLVCRYLSRASVPMSLPKPLILQPPNGASGSKAK*QLTQTTPD 233
Query: 260 RTDLTTRFATSRSRVTTPAPSPYRVSFALAIASSTGLNFIRHMTGPKISSFAMIMSSLTL 439
TD T F S VTTPA PYRV FA I SS LNF+R +TGPKISS A+ MSSLT
Sbjct: 234 LTDRDTVFMVSMFLVTTPAARPYRVLFAF*ITSSIVLNFMRAITGPKISSCAIDMSSLTS 413
Query: 440 VKTVGSM**P 469
VK GSM**P
Sbjct: 414 VKMAGSM**P 443
Score = 52.4 bits (108), Expect(2) = 5e-056
Identities = 21/32 (65%), Positives = 24/32 (75%)
Frame = -1 / -2
Query: 567 KAQYERVLSYIGHGKREGATLLTGGRPCGPEG 472
K QYE+VL YI GK EGATLLTGG+ C +G
Sbjct: 535 KNQYEKVLKYIDVGKSEGATLLTGGKACSDKG 440
Score = 39.1 bits (79), Expect(2) = 5e-043
Identities = 19/32 (59%), Positives = 19/32 (59%)
Frame = +2 / +3
Query: 473 PSGPHGLPPVKRVAPSRLPWPM*LRTLSY*AL 568
P PPV RVAPS LP M LRT SY* L
Sbjct: 441 PLSLQAFPPVSRVAPSLLPTSMYLRTFSY*FL 536
>gb|CA000617.1|CA000617 HS07N10u HS Hordeum vulgare subsp. vulgare cDNA clone HS07N10
3-PRIME, mRNA sequence
Length = 574
Score = 185 bits (398), Expect(2) = 5e-056
Identities = 78/126 (61%), Positives = 90/126 (71%)
Frame = -1 / -1
Query: 471 KGYYIEPTVFTNVKEDMIIAKEEIFGPVMCLMKFKPVEEAIARANDTRYGLGAGVVTRDL 292
KGYYIEP +FT+VK+DM IA+EEIFGPVM LMKFK +EE I +AN TRYGL AGVVT+++
Sbjct: 442 KGYYIEPAIFTDVKDDMSIAQEEIFGPVMALMKFKTMEEVIQKANSTRYGLAAGVVTKNI 263
Query: 291 DXXXXXXXXXXXXXXXXNCYFAMGSDCPFGGRKMSGFGKDEGMHALDKYLAVKSVVTPLR 112
D NCYFA D PFGG KMSGFGKD G ALDKYL K+VVTPL
Sbjct: 262 DTMNTVSRSVRSGVVWVNCYFAFDPDAPFGGCKMSGFGKDMGTDALDKYLHTKTVVTPLY 83
Query: 111 ASPWI* 94
+PW+*
Sbjct: 82 NTPWL* 65
Score = 149 bits (321), Expect(2) = 2e-041
Identities = 77/130 (59%), Positives = 86/130 (66%)
Frame = +2 / +3
Query: 80 EIKENQIQGEARSGVTTDLTARYLSSACMPSSLPKPLILRPPKGQSLPMAK*QFTHTTPA 259
+++ + QG SGVTT L RYLS A +P SLPKPLIL+PP G S AK*Q T TTP
Sbjct: 51 DVRPDHNQGVL*SGVTTVLVCRYLSRASVPMSLPKPLILQPPNGASGSKAK*QLTQTTPD 230
Query: 260 RTDLTTRFATSRSRVTTPAPSPYRVSFALAIASSTGLNFIRHMTGPKISSFAMIMSSLTL 439
TD T F S VTTPA P RV FA I SS LNF+R +TGPKISS A+ MSSLT
Sbjct: 231 LTDRDTVFMVSMFLVTTPAARP*RVLFAF*ITSSIVLNFMRAITGPKISSCAIDMSSLTS 410
Query: 440 VKTVGSM**P 469
VK GSM**P
Sbjct: 411 VKMAGSM**P 440
Score = 52.4 bits (108), Expect(2) = 5e-056
Identities = 21/32 (65%), Positives = 24/32 (75%)
Frame = -1 / -1
Query: 567 KAQYERVLSYIGHGKREGATLLTGGRPCGPEG 472
K QYE+VL YI GK EGATLLTGG+ C +G
Sbjct: 532 KNQYEKVLKYIDVGKSEGATLLTGGKACSDKG 437
Score = 39.1 bits (79), Expect(2) = 2e-041
Identities = 19/32 (59%), Positives = 19/32 (59%)
Frame = +2 / +3
Query: 473 PSGPHGLPPVKRVAPSRLPWPM*LRTLSY*AL 568
P PPV RVAPS LP M LRT SY* L
Sbjct: 438 PLSLQAFPPVSRVAPSLLPTSMYLRTFSY*FL 533
>gb|BU981973.1|BU981973 HA25C12r HA Hordeum vulgare subsp. vulgare cDNA clone HA25C12
5-PRIME, mRNA sequence
Length = 572
Score = 182 bits (393), Expect(2) = 3e-053
Identities = 77/126 (61%), Positives = 89/126 (70%)
Frame = -1 / +1
Query: 471 KGYYIEPTVFTNVKEDMIIAKEEIFGPVMCLMKFKPVEEAIARANDTRYGLGAGVVTRDL 292
KGYY EP +FT+VK+DM IA+EEIFGPVM LMKFK +EE I +AN TRYGL AGVVT+++
Sbjct: 91 KGYYXEPAIFTDVKDDMSIAQEEIFGPVMALMKFKTMEEVIQKANSTRYGLAAGVVTKNI 270
Query: 291 DXXXXXXXXXXXXXXXXNCYFAMGSDCPFGGRKMSGFGKDEGMHALDKYLAVKSVVTPLR 112
D NCYFA D PFGG KMSGFGKD G ALDKYL K+VVTPL
Sbjct: 271 DTMNTVSRSVRSGVVWVNCYFAFDPDAPFGGCKMSGFGKDMGTDALDKYLHTKTVVTPLY 450
Query: 111 ASPWI* 94
+PW+*
Sbjct: 451 NTPWL* 468
Score = 147 bits (315), Expect(2) = 3e-039
Identities = 76/130 (58%), Positives = 85/130 (65%)
Frame = +2 / -1
Query: 80 EIKENQIQGEARSGVTTDLTARYLSSACMPSSLPKPLILRPPKGQSLPMAK*QFTHTTPA 259
+++ + QG SGVTT L RYLS A +P SLPKPLIL+PP G S AK*Q T TTP
Sbjct: 482 DVRPDHNQGVL*SGVTTVLVCRYLSRASVPMSLPKPLILQPPNGASGSKAK*QLTQTTPD 303
Query: 260 RTDLTTRFATSRSRVTTPAPSPYRVSFALAIASSTGLNFIRHMTGPKISSFAMIMSSLTL 439
TD T F S VTTPA P RV FA I SS LNF+R +TGPKISS A+ MSSLT
Sbjct: 302 LTDRDTVFMVSMFLVTTPAARP*RVLFAF*ITSSIVLNFMRAITGPKISSCAIDMSSLTS 123
Query: 440 VKTVGSM**P 469
VK GS **P
Sbjct: 122 VKMAGSX**P 93
Score = 45.5 bits (93), Expect(2) = 3e-053
Identities = 18/28 (64%), Positives = 21/28 (75%)
Frame = -1 / +1
Query: 555 ERVLSYIGHGKREGATLLTGGRPCGPEG 472
E+VL YI GK EGATLLTGG+ C +G
Sbjct: 13 EKVLKYIDVGKSEGATLLTGGKACSDKG 96
Score = 34.5 bits (69), Expect(2) = 3e-039
Identities = 16/28 (57%), Positives = 16/28 (57%)
Frame = +2 / -1
Query: 473 PSGPHGLPPVKRVAPSRLPWPM*LRTLS 556
P PPV RVAPS LP M LRT S
Sbjct: 95 PLSLQAFPPVSRVAPSLLPTSMYLRTFS 12
>gb|CA015545.1|CA015545 HT14K09r HT Hordeum vulgare subsp. vulgare cDNA clone HT14K09
5-PRIME, mRNA sequence
Length = 584
Score = 185 bits (398), Expect(2) = 7e-052
Identities = 78/126 (61%), Positives = 90/126 (71%)
Frame = -1 / +3
Query: 471 KGYYIEPTVFTNVKEDMIIAKEEIFGPVMCLMKFKPVEEAIARANDTRYGLGAGVVTRDL 292
KGYYIEP +FT+VK+DM IA+EEIFGPVM LMKFK +EE I +AN TRYGL AGVVT+++
Sbjct: 75 KGYYIEPAIFTDVKDDMSIAQEEIFGPVMALMKFKTMEEVIQKANSTRYGLAAGVVTKNI 254
Query: 291 DXXXXXXXXXXXXXXXXNCYFAMGSDCPFGGRKMSGFGKDEGMHALDKYLAVKSVVTPLR 112
D NCYFA D PFGG KMSGFGKD G ALDKYL K+VVTPL
Sbjct: 255 DTMNTVSRSVRSGVVWVNCYFAFDPDAPFGGCKMSGFGKDMGTDALDKYLHTKTVVTPLY 434
Query: 111 ASPWI* 94
+PW+*
Sbjct: 435 NTPWL* 452
Score = 149 bits (321), Expect(2) = 3e-038
Identities = 77/130 (59%), Positives = 86/130 (66%)
Frame = +2 / -2
Query: 80 EIKENQIQGEARSGVTTDLTARYLSSACMPSSLPKPLILRPPKGQSLPMAK*QFTHTTPA 259
+++ + QG SGVTT L RYLS A +P SLPKPLIL+PP G S AK*Q T TTP
Sbjct: 466 DVRPDHNQGVL*SGVTTVLVCRYLSRASVPMSLPKPLILQPPNGASGSKAK*QLTQTTPD 287
Query: 260 RTDLTTRFATSRSRVTTPAPSPYRVSFALAIASSTGLNFIRHMTGPKISSFAMIMSSLTL 439
TD T F S VTTPA P RV FA I SS LNF+R +TGPKISS A+ MSSLT
Sbjct: 286 LTDRDTVFMVSMFLVTTPAARP*RVLFAF*ITSSIVLNFMRAITGPKISSCAIDMSSLTS 107
Query: 440 VKTVGSM**P 469
VK GSM**P
Sbjct: 106 VKMAGSM**P 77
Score = 38.6 bits (78), Expect(2) = 7e-052
Identities = 15/23 (65%), Positives = 17/23 (73%)
Frame = -1 / +3
Query: 540 YIGHGKREGATLLTGGRPCGPEG 472
YI GK EGATLLTGG+ C +G
Sbjct: 12 YIDVGKSEGATLLTGGKACSDKG 80
Score = 28.1 bits (55), Expect(2) = 3e-038
Identities = 12/22 (54%), Positives = 12/22 (54%)
Frame = +2 / -2
Query: 473 PSGPHGLPPVKRVAPSRLPWPM 538
P PPV RVAPS LP M
Sbjct: 79 PLSLQAFPPVSRVAPSLLPTSM 14
>gb|BI948988.1|BI948988 HVSMEl0011N01f Hordeum vulgare spike EST library HVcDNA0012
(Fusarium infected) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEl0011N01f, mRNA sequence
Length = 525
Score = 196 bits (423), Expect = 8e-050
Identities = 83/125 (66%), Positives = 96/125 (76%)
Frame = -1 / +3
Query: 462 YIEPTVFTNVKEDMIIAKEEIFGPVMCLMKFKPVEEAIARANDTRYGLGAGVVTRDLDXX 283
YIEPTVFT+VK+DMIIA EEIFGPVMCLMKF VEEAIARAN+TRYGL AGVVT+++D
Sbjct: 3 YIEPTVFTDVKDDMIIAGEEIFGPVMCLMKFTTVEEAIARANNTRYGLAAGVVTKNIDVA 182
Query: 282 XXXXXXXXXXXXXXNCYFAMGSDCPFGGRKMSGFGKDEGMHALDKYLAVKSVVTPLRASP 103
NCYFAM SDCPFGGRKMSGFG+D+GMHAL+++L K VTP+ P
Sbjct: 183 NRMTRSIRAGVVWVNCYFAMDSDCPFGGRKMSGFGQDDGMHALEQFLRRKGRVTPVYDFP 362
Query: 102 WI*FS 88
W+* S
Sbjct: 363 WL*AS 377
Score = 189 bits (408), Expect = 9e-048
Identities = 90/121 (74%), Positives = 94/121 (77%)
Frame = +2 / -3
Query: 101 QGEARSGVTTDLTARYLSSACMPSSLPKPLILRPPKGQSLPMAK*QFTHTTPARTDLTTR 280
QG++ +GVT L R SSACMPSS P PLILRPP GQSL MAK*QFTHTTPAR D
Sbjct: 364 QGKS*TGVTRPLRRRNCSSACMPSSCPNPLILRPPNGQSLSMAK*QFTHTTPARIDRVIL 185
Query: 281 FATSRSRVTTPAPSPYRVSFALAIASSTGLNFIRHMTGPKISSFAMIMSSLTLVKTVGSM 460
ATS VTTPA SPY V ALAIASST +NFIRHMTGPKISS AMIMSSLT VKTVGSM
Sbjct: 184 LATSMFLVTTPAASPYLVLLALAIASSTVVNFIRHMTGPKISSPAMIMSSLTSVKTVGSM 5
Query: 461 * 463
*
Sbjct: 4 * 2
Score = 76.7 bits (161), Expect(2) = 4e-021
Identities = 30/38 (78%), Positives = 31/38 (81%)
Frame = -3 / +2
Query: 463 LH*AHSFHQRQGGHDHSEGGDLRTRHVPDEVQAGGGGD 350
LH AHSFH+ QG HDHS GGDLR RHVPDEV GGGGD
Sbjct: 2 LHRAHSFHRCQG*HDHSGGGDLRARHVPDEVHHGGGGD 115
Score = 45.1 bits (92), Expect(2) = 4e-021
Identities = 23/40 (57%), Positives = 25/40 (62%)
Frame = -3 / +2
Query: 220 QRLPLRRPQDERLRQGRGHARARQVPGRQVRRHAAPRLAL 101
QRLP+R QDE +R GR HARA VP RHA RL L
Sbjct: 245 QRLPVRGAQDEWVRAGRRHARA*TVPSP*GPRHARLRLPL 364
>gb|BU984313.1|BU984313 HF03J09r HF Hordeum vulgare subsp. vulgare cDNA clone HF03J09
5-PRIME, mRNA sequence
Length = 526
Score = 164 bits (352), Expect(2) = 1e-049
Identities = 69/110 (62%), Positives = 78/110 (70%)
Frame = -1 / +3
Query: 471 KGYYIEPTVFTNVKEDMIIAKEEIFGPVMCLMKFKPVEEAIARANDTRYGLGAGVVTRDL 292
KGYYIEP +FT+VK+DM IA+EEIFGPVM LMKFK +EE I +AN TRYGL AGVVT+++
Sbjct: 192 KGYYIEPAIFTDVKDDMSIAQEEIFGPVMALMKFKTMEEVIQKANSTRYGLAAGVVTKNI 371
Query: 291 DXXXXXXXXXXXXXXXXNCYFAMGSDCPFGGRKMSGFGKDEGMHALDKYL 142
D NCYFA D PFGG KMSGFGKD G ALDKYL
Sbjct: 372 DTMNTVSRSVRSGVVWVNCYFAFDPDAPFGGCKMSGFGKDMGTDALDKYL 521
Score = 134 bits (288), Expect(2) = 6e-037
Identities = 69/109 (63%), Positives = 74/109 (67%)
Frame = +2 / -1
Query: 143 RYLSSACMPSSLPKPLILRPPKGQSLPMAK*QFTHTTPARTDLTTRFATSRSRVTTPAPS 322
RYLS A +P SLPKPLIL+PP G S AK*Q T TTP TD T F S VTTPA
Sbjct: 520 RYLSRASVPMSLPKPLILQPPNGASGSKAK*QLTQTTPDLTDRDTVFMVSMFLVTTPAAR 341
Query: 323 PYRVSFALAIASSTGLNFIRHMTGPKISSFAMIMSSLTLVKTVGSM**P 469
P RV FA I SS LNF+R +TGPKISS A+ MSSLT VK GSM**P
Sbjct: 340 P*RVLFAF*ITSSIVLNFMRAITGPKISSCAIDMSSLTSVKMAGSM**P 194
Score = 52.4 bits (108), Expect(2) = 1e-049
Identities = 21/32 (65%), Positives = 24/32 (75%)
Frame = -1 / +3
Query: 567 KAQYERVLSYIGHGKREGATLLTGGRPCGPEG 472
K QYE+VL YI GK EGATLLTGG+ C +G
Sbjct: 102 KNQYEKVLKYIDVGKSEGATLLTGGKACSDKG 197
Score = 39.1 bits (79), Expect(2) = 6e-037
Identities = 19/32 (59%), Positives = 19/32 (59%)
Frame = +2 / -1
Query: 473 PSGPHGLPPVKRVAPSRLPWPM*LRTLSY*AL 568
P PPV RVAPS LP M LRT SY* L
Sbjct: 196 PLSLQAFPPVSRVAPSLLPTSMYLRTFSY*FL 101
>gb|BQ464230.1|BQ464230 HF01L06T HF Hordeum vulgare subsp. vulgare cDNA clone HF01L06
5-PRIME, mRNA sequence
Length = 511
Score = 186 bits (400), Expect = 1e-046
Identities = 79/130 (60%), Positives = 91/130 (70%)
Frame = -1 / +3
Query: 483 GPEGKGYYIEPTVFTNVKEDMIIAKEEIFGPVMCLMKFKPVEEAIARANDTRYGLGAGVV 304
G KGYYIEP +FT+VK+DM IA+EEIFGPVM LMKFK +EE I +AN TRYGL AGVV
Sbjct: 9 GCSDKGYYIEPAIFTDVKDDMSIAQEEIFGPVMALMKFKTMEEVIQKANSTRYGLAAGVV 188
Query: 303 TRDLDXXXXXXXXXXXXXXXXNCYFAMGSDCPFGGRKMSGFGKDEGMHALDKYLAVKSVV 124
T+++D NCYFA D PFGG KMSGFGKD G ALDKYL K+VV
Sbjct: 189 TKNIDTMNTVSRSVRSGVVWVNCYFAFDPDAPFGGCKMSGFGKDMGTDALDKYLHTKTVV 368
Query: 123 TPLRASPWI* 94
TPL +PW+*
Sbjct: 369 TPLYNTPWL* 398
Score = 150 bits (323), Expect = 5e-036
Identities = 78/135 (57%), Positives = 87/135 (64%)
Frame = +2 / -1
Query: 80 EIKENQIQGEARSGVTTDLTARYLSSACMPSSLPKPLILRPPKGQSLPMAK*QFTHTTPA 259
+++ + QG SGVTT L RYLS A +P SLPKPLIL+PP G S AK*Q T TTP
Sbjct: 412 DVRPDHNQGVL*SGVTTVLVCRYLSRASVPMSLPKPLILQPPNGASGSKAK*QLTQTTPD 233
Query: 260 RTDLTTRFATSRSRVTTPAPSPYRVSFALAIASSTGLNFIRHMTGPKISSFAMIMSSLTL 439
TD T F S VTTPA P RV FA I SS LNF+R +TGPKISS A+ MSSLT
Sbjct: 232 LTDRDTVFMVSMFLVTTPAARP*RVLFAF*ITSSIVLNFMRAITGPKISSCAIDMSSLTS 53
Query: 440 VKTVGSM**PFPSGP 484
VK GSM**P P
Sbjct: 52 VKMAGSM**PLSLQP 8
>gb|CA009784.1|CA009784 HT12M08u HT Hordeum vulgare subsp. vulgare cDNA clone HT12M08
3-PRIME, mRNA sequence
Length = 532
Score = 185 bits (398), Expect = 2e-046
Identities = 78/126 (61%), Positives = 90/126 (71%)
Frame = -1 / -2
Query: 471 KGYYIEPTVFTNVKEDMIIAKEEIFGPVMCLMKFKPVEEAIARANDTRYGLGAGVVTRDL 292
KGYYIEP +FT+VK+DM IA+EEIFGPVM LMKFK +EE I +AN TRYGL AGVVT+++
Sbjct: 510 KGYYIEPAIFTDVKDDMSIAQEEIFGPVMALMKFKTMEEVIQKANSTRYGLAAGVVTKNI 331
Query: 291 DXXXXXXXXXXXXXXXXNCYFAMGSDCPFGGRKMSGFGKDEGMHALDKYLAVKSVVTPLR 112
D NCYFA D PFGG KMSGFGKD G ALDKYL K+VVTPL
Sbjct: 330 DTMNTVSRSVRSGVVWVNCYFAFDPDAPFGGCKMSGFGKDMGTDALDKYLHTKTVVTPLY 151
Query: 111 ASPWI* 94
+PW+*
Sbjct: 150 NTPWL* 133
Score = 149 bits (321), Expect = 9e-036
Identities = 77/130 (59%), Positives = 86/130 (66%)
Frame = +2 / +2
Query: 80 EIKENQIQGEARSGVTTDLTARYLSSACMPSSLPKPLILRPPKGQSLPMAK*QFTHTTPA 259
+++ + QG SGVTT L RYLS A +P SLPKPLIL+PP G S AK*Q T TTP
Sbjct: 119 DVRPDHNQGVL*SGVTTVLVCRYLSRASVPMSLPKPLILQPPNGASGSKAK*QLTQTTPD 298
Query: 260 RTDLTTRFATSRSRVTTPAPSPYRVSFALAIASSTGLNFIRHMTGPKISSFAMIMSSLTL 439
TD T F S VTTPA P RV FA I SS LNF+R +TGPKISS A+ MSSLT
Sbjct: 299 LTDRDTVFMVSMFLVTTPAARP*RVLFAF*ITSSIVLNFMRAITGPKISSCAIDMSSLTS 478
Query: 440 VKTVGSM**P 469
VK GSM**P
Sbjct: 479 VKMAGSM**P 508
>gb|CA021407.1|CA021407 HZ40A05r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ40A05
5-PRIME, mRNA sequence
Length = 530
Score = 147 bits (316), Expect = 4e-035
Identities = 76/130 (58%), Positives = 85/130 (65%)
Frame = +2 / +2
Query: 80 EIKENQIQGEARSGVTTDLTARYLSSACMPSSLPKPLILRPPKGQSLPMAK*QFTHTTPA 259
+++ + QG SGVTT L RYLS A +P SLPKPLIL+PP G S AK Q T TTP
Sbjct: 101 DVRPDHNQGVL*SGVTTVLVCRYLSRASVPMSLPKPLILQPPNGASGSKAKYQLTQTTPD 280
Query: 260 RTDLTTRFATSRSRVTTPAPSPYRVSFALAIASSTGLNFIRHMTGPKISSFAMIMSSLTL 439
TD T F S VTTPA P RV FA I SS LNF+R +TGPKISS A+ MSSLT
Sbjct: 281 LTDRDTVFMVSMFLVTTPAARP*RVLFAF*ITSSIVLNFMRAITGPKISSCAIDMSSLTS 460
Query: 440 VKTVGSM**P 469
VK GSM**P
Sbjct: 461 VKMAGSM**P 490
Score = 111 bits (238), Expect(3) = 5e-044
Identities = 44/61 (72%), Positives = 53/61 (86%)
Frame = -1 / -3
Query: 471 KGYYIEPTVFTNVKEDMIIAKEEIFGPVMCLMKFKPVEEAIARANDTRYGLGAGVVTRDL 292
KGYYIEP +FT+VK+DM IA+EEIFGPVM LMKFK +EE I +AN TRYGL AGVVT+++
Sbjct: 492 KGYYIEPAIFTDVKDDMSIAQEEIFGPVMALMKFKTMEEVIQKANSTRYGLAAGVVTKNI 313
Query: 291 D 289
D
Sbjct: 312 D 310
Score = 78.0 bits (164), Expect(3) = 5e-044
Identities = 32/47 (68%), Positives = 35/47 (74%)
Frame = -1 / -3
Query: 234 YFAMGSDCPFGGRKMSGFGKDEGMHALDKYLAVKSVVTPLRASPWI* 94
YFA D PFGG KMSGFGKD G ALDKYL K+VVTPL +PW+*
Sbjct: 255 YFAFDPDAPFGGCKMSGFGKDMGTDALDKYLHTKTVVTPLYNTPWL* 115
Score = 25.8 bits (50), Expect(3) = 5e-044
Identities = 9/14 (64%), Positives = 11/14 (78%)
Frame = -1 / -3
Query: 513 ATLLTGGRPCGPEG 472
ATLLTGG+ C +G
Sbjct: 528 ATLLTGGKACSDKG 487
>gb|BF260792.2|BF260792 HVSMEf0022P08f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEf0022P08f, mRNA sequence
Length = 727
Score = 121 bits (258), Expect(3) = 2e-042
Identities = 50/96 (52%), Positives = 62/96 (64%)
Frame = -1 / +3
Query: 471 KGYYIEPTVFTNVKEDMIIAKEEIFGPVMCLMKFKPVEEAIARANDTRYGLGAGVVTRDL 292
KGYYIEPT+F +VKEDM IA++EIFGPVM LMKFK V+EAI AN T+YGL G++T++L
Sbjct: 384 KGYYIEPTIFADVKEDMKIAQDEIFGPVMSLMKFKTVDEAIDNANCTKYGLAGGIITKNL 563
Query: 291 DXXXXXXXXXXXXXXXXNCYFAMGSDCPFGGRKMSG 184
D NCY A + P GG + G
Sbjct: 564 DIANKVSRSVSAGTVWVNCYLAFNPEAPCGGTRRPG 671
Score = 116 bits (247), Expect(2) = 1e-033
Identities = 58/96 (60%), Positives = 66/96 (68%)
Frame = +2 / -1
Query: 182 KPLILRPPKGQSLPMAK*QFTHTTPARTDLTTRFATSRSRVTTPAPSPYRVSFALAIASS 361
+P +L PP+G S AK*QFTHT PA TDL T A S+ V P SPY V AL+IASS
Sbjct: 673 EPGLLVPPQGASGLKAK*QFTHTVPALTDLDTLLAMSKFLVMIPPASPYLVQLALSIASS 494
Query: 362 TGLNFIRHMTGPKISSFAMIMSSLTLVKTVGSM**P 469
T LNF+R +TGPKISS A+ MSSLT VGSM* P
Sbjct: 493 TVLNFMRDITGPKISS*AIFMSSLTSANMVGSM*YP 386
Score = 58.8 bits (122), Expect(3) = 2e-042
Identities = 23/32 (71%), Positives = 26/32 (81%)
Frame = -1 / +3
Query: 567 KAQYERVLSYIGHGKREGATLLTGGRPCGPEG 472
K Q+ERVL YI HGK EGATLLTGG+P G +G
Sbjct: 294 KEQFERVLRYIEHGKSEGATLLTGGKPAGDKG 389
Score = 46.9 bits (96), Expect(2) = 1e-033
Identities = 20/29 (68%), Positives = 22/29 (75%)
Frame = +2 / -1
Query: 470 FPSGPHGLPPVKRVAPSRLPWPM*LRTLS 556
+P P GLPPV+RVAPS LP M LRTLS
Sbjct: 391 YPLSPAGLPPVRRVAPSLLPCSMYLRTLS 305
Score = 30.9 bits (61), Expect(3) = 2e-042
Identities = 12/22 (54%), Positives = 16/22 (72%)
Frame = -1 / +2
Query: 201 GRKMSGFGKDEGMHALDKYLAV 136
G K +GFG+D+GM A DK + V
Sbjct: 653 GYKKTGFGRDQGMMANDKSMQV 718
>gb|BQ659782.1|BQ659782 HF01L06w HF Hordeum vulgare subsp. vulgare cDNA clone HF01L06
3-PRIME, mRNA sequence
Length = 475
Score = 169 bits (364), Expect = 1e-041
Identities = 72/120 (60%), Positives = 84/120 (70%)
Frame = -1 / -2
Query: 453 PTVFTNVKEDMIIAKEEIFGPVMCLMKFKPVEEAIARANDTRYGLGAGVVTRDLDXXXXX 274
P +FT+VK+DM IA+EEIFGPVM LMKFK +EE I +AN TRYGL AGVVT+++D
Sbjct: 474 PAIFTDVKDDMSIAQEEIFGPVMALMKFKTMEEVIQKANSTRYGLAAGVVTKNIDTMNTV 295
Query: 273 XXXXXXXXXXXNCYFAMGSDCPFGGRKMSGFGKDEGMHALDKYLAVKSVVTPLRASPWI* 94
NCYFA D PFGG KMSGFGKD G ALDKYL K+VVTPL +PW+*
Sbjct: 294 SRSVRSGVVWVNCYFAFDPDAPFGGCKMSGFGKDMGTDALDKYLHTKTVVTPLYNTPWL* 115
Score = 141 bits (303), Expect = 3e-033
Identities = 72/125 (57%), Positives = 81/125 (64%)
Frame = +2 / +2
Query: 80 EIKENQIQGEARSGVTTDLTARYLSSACMPSSLPKPLILRPPKGQSLPMAK*QFTHTTPA 259
+++ + QG SGVTT L RYLS A +P SLPKPLIL+PP G S AK*Q T TTP
Sbjct: 101 DVRPDHNQGVL*SGVTTVLVCRYLSRASVPMSLPKPLILQPPNGASGSKAK*QLTQTTPD 280
Query: 260 RTDLTTRFATSRSRVTTPAPSPYRVSFALAIASSTGLNFIRHMTGPKISSFAMIMSSLTL 439
TD T F S VTTPA P RV FA I SS LNF+R +TGPKISS A+ MSSLT
Sbjct: 281 LTDRDTVFMVSMFLVTTPAARP*RVLFAF*ITSSIVLNFMRAITGPKISSCAIDMSSLTS 460
Query: 440 VKTVG 454
VK G
Sbjct: 461 VKMAG 475
>gb|BQ761582.1|BQ761582 EBem10_SQ001_N02_R embryo, 2 Day germination, no treatment, cv
Optic, EBem10 Hordeum vulgare subsp. vulgare cDNA clone
EBem10_SQ001_N02 5', mRNA sequence
Length = 347
Score = 165 bits (355), Expect = 2e-040
Identities = 70/113 (61%), Positives = 79/113 (69%)
Frame = -1 / -1
Query: 471 KGYYIEPTVFTNVKEDMIIAKEEIFGPVMCLMKFKPVEEAIARANDTRYGLGAGVVTRDL 292
KGYYIEP +FT+VK+DM IA+EEIFGPVM LMKFK +EE I +AN TRYGL AGVVT+++
Sbjct: 341 KGYYIEPAIFTDVKDDMSIAQEEIFGPVMALMKFKTMEEVIQKANSTRYGLAAGVVTKNI 162
Query: 291 DXXXXXXXXXXXXXXXXNCYFAMGSDCPFGGRKMSGFGKDEGMHALDKYLAVK 133
D NCYFA D PFGG KMSGFGKD G ALDKYL K
Sbjct: 161 DTMNTVSRSVRSGVVWVNCYFAFDPDAPFGGCKMSGFGKDMGTDALDKYLHTK 3
Score = 136 bits (292), Expect = 9e-032
Identities = 70/112 (62%), Positives = 75/112 (66%)
Frame = +2 / +1
Query: 134 LTARYLSSACMPSSLPKPLILRPPKGQSLPMAK*QFTHTTPARTDLTTRFATSRSRVTTP 313
L RYLS A +P SLPKPLIL+PP G S AK*Q T TTP TD T F S VTTP
Sbjct: 4 LVCRYLSRASVPMSLPKPLILQPPNGASGSKAK*QLTQTTPDLTDRDTVFMVSMFLVTTP 183
Query: 314 APSPYRVSFALAIASSTGLNFIRHMTGPKISSFAMIMSSLTLVKTVGSM**P 469
A P RV FA I SS LNF+R +TGPKISS A+ MSSLT VK GSM**P
Sbjct: 184 AARP*RVLFAF*ITSSIVLNFMRAITGPKISSCAIDMSSLTSVKMAGSM**P 339
>gb|BF253896.2|BF253896 HVSMEf0002G19f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEf0002G19f, mRNA sequence
Length = 844
Score = 121 bits (258), Expect(2) = 9e-039
Identities = 51/93 (54%), Positives = 65/93 (69%)
Frame = -1 / +3
Query: 471 KGYYIEPTVFTNVKEDMIIAKEEIFGPVMCLMKFKPVEEAIARANDTRYGLGAGVVTRDL 292
KGYYIEPT+F +VKEDM IA++EIFGPVM LMKFK V+EAI +AN T+YGL G++T++L
Sbjct: 465 KGYYIEPTIFADVKEDMKIAQDEIFGPVMSLMKFKTVDEAIEKANCTKYGLAXGIITKNL 644
Query: 291 DXXXXXXXXXXXXXXXXNCYFAMGSDCPFGGRK 193
D NCYFA+ + P G +
Sbjct: 645 DIANKVSRSVRAXTVXVNCYFALDPEAPSAGTR 743
Score = 104 bits (221), Expect(2) = 4e-030
Identities = 54/92 (58%), Positives = 60/92 (65%)
Frame = +2 / -1
Query: 194 LRPPKGQSLPMAK*QFTHTTPARTDLTTRFATSRSRVTTPAPSPYRVSFALAIASSTGLN 373
L P +G S AK*QFT T ARTDL T A S+ V P SPY V A +IASST LN
Sbjct: 742 LVPAEGASGSRAK*QFTXTVXARTDLDTLLAMSKFLVMIPXASPYLVQLAFSIASSTVLN 563
Query: 374 FIRHMTGPKISSFAMIMSSLTLVKTVGSM**P 469
F+R +TGPKISS A+ MSSLT VGSM* P
Sbjct: 562 FMRDITGPKISS*AIFMSSLTSANMVGSM*YP 467
Score = 58.8 bits (122), Expect(2) = 9e-039
Identities = 23/32 (71%), Positives = 26/32 (81%)
Frame = -1 / +3
Query: 567 KAQYERVLSYIGHGKREGATLLTGGRPCGPEG 472
K Q+ERVL YI HGK EGATLLTGG+P G +G
Sbjct: 375 KEQFERVLRYIEHGKSEGATLLTGGKPAGDKG 470
Score = 46.9 bits (96), Expect(2) = 4e-030
Identities = 20/29 (68%), Positives = 22/29 (75%)
Frame = +2 / -1
Query: 470 FPSGPHGLPPVKRVAPSRLPWPM*LRTLS 556
+P P GLPPV+RVAPS LP M LRTLS
Sbjct: 472 YPLSPAGLPPVRRVAPSLLPCSMYLRTLS 386
>dbj|AB055519.1| Hordeum vulgare mRNA for mitochondrial aldehyde dehydrogenase ALDH2,
complete cds
Length = 2128
Score = 141 bits (302), Expect(2) = 6e-038
Identities = 59/126 (46%), Positives = 81/126 (64%)
Frame = -1 / +1
Query: 471 KGYYIEPTVFTNVKEDMIIAKEEIFGPVMCLMKFKPVEEAIARANDTRYGLGAGVVTRDL 292
KGYYI+PT+F++V++DM IA+EEIFGPV + KF + E I RAN ++YGL AGV T +L
Sbjct: 1354 KGYYIQPTIFSDVQDDMKIAQEEIFGPVQSIFKFNDLNEVIKRANASQYGLAAGVFTNNL 1533
Query: 291 DXXXXXXXXXXXXXXXXNCYFAMGSDCPFGGRKMSGFGKDEGMHALDKYLAVKSVVTPLR 112
D NC+ + PFGG KMSG G+++G+ +L YL VK+VVT L+
Sbjct: 1534 DTANTLTRALRAGTIWVNCFDIFDAAIPFGGYKMSGIGREKGIDSLKNYLQVKAVVTALK 1713
Query: 111 ASPWI* 94
W+*
Sbjct: 1714 NPAWL* 1731
Score = 105 bits (224), Expect(2) = 7e-024
Identities = 59/118 (50%), Positives = 65/118 (55%)
Frame = +2 / -3
Query: 116 SGVTTDLTARYLSSACMPSSLPKPLILRPPKGQSLPMAK*QFTHTTPARTDLTTRFATSR 295
S VTT LT R MP SLP PLIL PPKG + QFT PA A SR
Sbjct: 1709 SAVTTALTCR*FFRLSMPFSLPMPLILYPPKGIAASKMSKQFTQIVPALRARVKVLAVSR 1530
Query: 296 SRVTTPAPSPYRVSFALAIASSTGLNFIRHMTGPKISSFAMIMSSLTLVKTVGSM**P 469
V TPA +PY ++FAL I S LN TGP ISS+A+ MSS T K VG M**P
Sbjct: 1529 LLVKTPAANPYWLAFALLITSLRSLNLKID*TGPNISSWAIFMSSCTSEKIVGWM**P 1356
Score = 35.9 bits (72), Expect(2) = 6e-038
Identities = 14/30 (46%), Positives = 20/30 (66%)
Frame = -1 / +1
Query: 561 QYERVLSYIGHGKREGATLLTGGRPCGPEG 472
Q++++L YI G GATL+TGG G +G
Sbjct: 1270 QFKKILRYIKSGVDSGATLVTGGDKLGDKG 1359
Score = 24.4 bits (47), Expect(2) = 7e-024
Identities = 10/19 (52%), Positives = 11/19 (57%)
Frame = +2 / -3
Query: 473 PSGPHGLPPVKRVAPSRLP 529
P P+ PPV RVAP P
Sbjct: 1358 PLSPNLSPPVTRVAPLSTP 1302
>gb|BM815988.1|BM815988 HC108H09_SK.ab1 HC Hordeum vulgare subsp. vulgare cDNA clone
HC108H09_SK.ab1 similar to aldehyde dehydrogenase [Oryza
sativa], T-cytoplasm male sterility restorer factor 2
[Zea mays],aldehyde dehydrogenase (NAD) (EC 1.2.1.3) 2A
precursor, mitochondrial [Nicotiana tabacum],aldehyde
dehydrogenase ALDH2b [Oryza sativa], mRNA sequence
Length = 896
Score = 141 bits (302), Expect(2) = 6e-038
Identities = 59/126 (46%), Positives = 81/126 (64%)
Frame = -1 / +3
Query: 471 KGYYIEPTVFTNVKEDMIIAKEEIFGPVMCLMKFKPVEEAIARANDTRYGLGAGVVTRDL 292
KGYYI+PT+F++V++DM IA+EEIFGPV + KF + E I RAN ++YGL AGV T +L
Sbjct: 132 KGYYIQPTIFSDVQDDMKIAQEEIFGPVQSIFKFNDLNEVIKRANASQYGLAAGVFTNNL 311
Query: 291 DXXXXXXXXXXXXXXXXNCYFAMGSDCPFGGRKMSGFGKDEGMHALDKYLAVKSVVTPLR 112
D NC+ + PFGG KMSG G+++G+ +L YL VK+VVT L+
Sbjct: 312 DTANTLTRALRAGTIWVNCFDIFDAAIPFGGYKMSGIGREKGIDSLKNYLQVKAVVTALK 491
Query: 111 ASPWI* 94
W+*
Sbjct: 492 NPAWL* 509
Score = 105 bits (224), Expect(2) = 7e-024
Identities = 59/118 (50%), Positives = 65/118 (55%)
Frame = +2 / -2
Query: 116 SGVTTDLTARYLSSACMPSSLPKPLILRPPKGQSLPMAK*QFTHTTPARTDLTTRFATSR 295
S VTT LT R MP SLP PLIL PPKG + QFT PA A SR
Sbjct: 487 SAVTTALTCR*FFRLSMPFSLPMPLILYPPKGIAASKMSKQFTQIVPALRARVKVLAVSR 308
Query: 296 SRVTTPAPSPYRVSFALAIASSTGLNFIRHMTGPKISSFAMIMSSLTLVKTVGSM**P 469
V TPA +PY ++FAL I S LN TGP ISS+A+ MSS T K VG M**P
Sbjct: 307 LLVKTPAANPYWLAFALLITSLRSLNLKID*TGPNISSWAIFMSSCTSEKIVGWM**P 134
Score = 35.9 bits (72), Expect(2) = 6e-038
Identities = 14/30 (46%), Positives = 20/30 (66%)
Frame = -1 / +3
Query: 561 QYERVLSYIGHGKREGATLLTGGRPCGPEG 472
Q++++L YI G GATL+TGG G +G
Sbjct: 48 QFKKILRYIKSGVDSGATLVTGGDKLGDKG 137
Score = 24.4 bits (47), Expect(2) = 7e-024
Identities = 10/19 (52%), Positives = 11/19 (57%)
Frame = +2 / -2
Query: 473 PSGPHGLPPVKRVAPSRLP 529
P P+ PPV RVAP P
Sbjct: 136 PLSPNLSPPVTRVAPLSTP 80
>gb|BF267540.2|BF267540 HV_CEa0018D16f Hordeum vulgare seedling green leaf EST library
HVcDNA0004 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEa0018D16f, mRNA sequence
Length = 803
Score = 141 bits (302), Expect(2) = 6e-038
Identities = 59/126 (46%), Positives = 81/126 (64%)
Frame = -1 / +3
Query: 471 KGYYIEPTVFTNVKEDMIIAKEEIFGPVMCLMKFKPVEEAIARANDTRYGLGAGVVTRDL 292
KGYYI+PT+F++V++DM IA+EEIFGPV + KF + E I RAN ++YGL AGV T +L
Sbjct: 183 KGYYIQPTIFSDVQDDMKIAQEEIFGPVQSIFKFNDLNEVIKRANASQYGLAAGVFTNNL 362
Query: 291 DXXXXXXXXXXXXXXXXNCYFAMGSDCPFGGRKMSGFGKDEGMHALDKYLAVKSVVTPLR 112
D NC+ + PFGG KMSG G+++G+ +L YL VK+VVT L+
Sbjct: 363 DTANTLTRALRAGTIWVNCFDIFDAAIPFGGYKMSGIGREKGIDSLKNYLQVKAVVTALK 542
Query: 111 ASPWI* 94
W+*
Sbjct: 543 NPAWL* 560
Score = 105 bits (224), Expect(2) = 7e-024
Identities = 59/118 (50%), Positives = 65/118 (55%)
Frame = +2 / -2
Query: 116 SGVTTDLTARYLSSACMPSSLPKPLILRPPKGQSLPMAK*QFTHTTPARTDLTTRFATSR 295
S VTT LT R MP SLP PLIL PPKG + QFT PA A SR
Sbjct: 538 SAVTTALTCR*FFRLSMPFSLPMPLILYPPKGIAASKMSKQFTQIVPALRARVKVLAVSR 359
Query: 296 SRVTTPAPSPYRVSFALAIASSTGLNFIRHMTGPKISSFAMIMSSLTLVKTVGSM**P 469
V TPA +PY ++FAL I S LN TGP ISS+A+ MSS T K VG M**P
Sbjct: 358 LLVKTPAANPYWLAFALLITSLRSLNLKID*TGPNISSWAIFMSSCTSEKIVGWM**P 185
Score = 35.9 bits (72), Expect(2) = 6e-038
Identities = 14/30 (46%), Positives = 20/30 (66%)
Frame = -1 / +3
Query: 561 QYERVLSYIGHGKREGATLLTGGRPCGPEG 472
Q++++L YI G GATL+TGG G +G
Sbjct: 99 QFKKILRYIKSGVDSGATLVTGGDKLGDKG 188
Score = 24.4 bits (47), Expect(2) = 7e-024
Identities = 10/19 (52%), Positives = 11/19 (57%)
Frame = +2 / -2
Query: 473 PSGPHGLPPVKRVAPSRLP 529
P P+ PPV RVAP P
Sbjct: 187 PLSPNLSPPVTRVAPLSTP 131
>gb|BJ544525.1|BJ544525 BJ544525 K. Sato unpublished cDNA library, cv. Akashinriki
vegetative stage leaves Hordeum vulgare subsp. vulgare
cDNA clone baak30h11 5', mRNA sequence
Length = 696
Score = 141 bits (302), Expect(2) = 6e-038
Identities = 59/126 (46%), Positives = 81/126 (64%)
Frame = -1 / +1
Query: 471 KGYYIEPTVFTNVKEDMIIAKEEIFGPVMCLMKFKPVEEAIARANDTRYGLGAGVVTRDL 292
KGYYI+PT+F++V++DM IA+EEIFGPV + KF + E I RAN ++YGL AGV T +L
Sbjct: 268 KGYYIQPTIFSDVQDDMKIAQEEIFGPVQSIFKFNDLNEVIKRANASQYGLAAGVFTNNL 447
Query: 291 DXXXXXXXXXXXXXXXXNCYFAMGSDCPFGGRKMSGFGKDEGMHALDKYLAVKSVVTPLR 112
D NC+ + PFGG KMSG G+++G+ +L YL VK+VVT L+
Sbjct: 448 DTANTLTRALRAGTIWVNCFDIFDAAIPFGGYKMSGIGREKGIDSLKNYLQVKAVVTALK 627
Query: 111 ASPWI* 94
W+*
Sbjct: 628 NPAWL* 645
Score = 105 bits (224), Expect(2) = 7e-024
Identities = 59/118 (50%), Positives = 65/118 (55%)
Frame = +2 / -2
Query: 116 SGVTTDLTARYLSSACMPSSLPKPLILRPPKGQSLPMAK*QFTHTTPARTDLTTRFATSR 295
S VTT LT R MP SLP PLIL PPKG + QFT PA A SR
Sbjct: 623 SAVTTALTCR*FFRLSMPFSLPMPLILYPPKGIAASKMSKQFTQIVPALRARVKVLAVSR 444
Query: 296 SRVTTPAPSPYRVSFALAIASSTGLNFIRHMTGPKISSFAMIMSSLTLVKTVGSM**P 469
V TPA +PY ++FAL I S LN TGP ISS+A+ MSS T K VG M**P
Sbjct: 443 LLVKTPAANPYWLAFALLITSLRSLNLKID*TGPNISSWAIFMSSCTSEKIVGWM**P 270
Score = 35.9 bits (72), Expect(2) = 6e-038
Identities = 14/30 (46%), Positives = 20/30 (66%)
Frame = -1 / +1
Query: 561 QYERVLSYIGHGKREGATLLTGGRPCGPEG 472
Q++++L YI G GATL+TGG G +G
Sbjct: 184 QFKKILRYIKSGVDSGATLVTGGDKLGDKG 273
Score = 24.4 bits (47), Expect(2) = 7e-024
Identities = 10/19 (52%), Positives = 11/19 (57%)
Frame = +2 / -2
Query: 473 PSGPHGLPPVKRVAPSRLP 529
P P+ PPV RVAP P
Sbjct: 272 PLSPNLSPPVTRVAPLSTP 216
>gb|BJ544355.1|BJ544355 BJ544355 K. Sato unpublished cDNA library, cv. Akashinriki
vegetative stage leaves Hordeum vulgare subsp. vulgare
cDNA clone baak26h06 5', mRNA sequence
Length = 638
Score = 141 bits (302), Expect(2) = 6e-038
Identities = 59/126 (46%), Positives = 81/126 (64%)
Frame = -1 / +1
Query: 471 KGYYIEPTVFTNVKEDMIIAKEEIFGPVMCLMKFKPVEEAIARANDTRYGLGAGVVTRDL 292
KGYYI+PT+F++V++DM IA+EEIFGPV + KF + E I RAN ++YGL AGV T +L
Sbjct: 256 KGYYIQPTIFSDVQDDMKIAQEEIFGPVQSIFKFNDLNEVIKRANASQYGLAAGVFTNNL 435
Query: 291 DXXXXXXXXXXXXXXXXNCYFAMGSDCPFGGRKMSGFGKDEGMHALDKYLAVKSVVTPLR 112
D NC+ + PFGG KMSG G+++G+ +L YL VK+VVT L+
Sbjct: 436 DTANTLTRALRAGTIWVNCFDIFDAAIPFGGYKMSGIGREKGIDSLKNYLQVKAVVTALK 615
Query: 111 ASPWI* 94
W+*
Sbjct: 616 NPAWL* 633
Score = 105 bits (224), Expect(2) = 7e-024
Identities = 59/118 (50%), Positives = 65/118 (55%)
Frame = +2 / -1
Query: 116 SGVTTDLTARYLSSACMPSSLPKPLILRPPKGQSLPMAK*QFTHTTPARTDLTTRFATSR 295
S VTT LT R MP SLP PLIL PPKG + QFT PA A SR
Sbjct: 611 SAVTTALTCR*FFRLSMPFSLPMPLILYPPKGIAASKMSKQFTQIVPALRARVKVLAVSR 432
Query: 296 SRVTTPAPSPYRVSFALAIASSTGLNFIRHMTGPKISSFAMIMSSLTLVKTVGSM**P 469
V TPA +PY ++FAL I S LN TGP ISS+A+ MSS T K VG M**P
Sbjct: 431 LLVKTPAANPYWLAFALLITSLRSLNLKID*TGPNISSWAIFMSSCTSEKIVGWM**P 258
Score = 35.9 bits (72), Expect(2) = 6e-038
Identities = 14/30 (46%), Positives = 20/30 (66%)
Frame = -1 / +1
Query: 561 QYERVLSYIGHGKREGATLLTGGRPCGPEG 472
Q++++L YI G GATL+TGG G +G
Sbjct: 172 QFKKILRYIKSGVDSGATLVTGGDKLGDKG 261
Score = 24.4 bits (47), Expect(2) = 7e-024
Identities = 10/19 (52%), Positives = 11/19 (57%)
Frame = +2 / -1
Query: 473 PSGPHGLPPVKRVAPSRLP 529
P P+ PPV RVAP P
Sbjct: 260 PLSPNLSPPVTRVAPLSTP 204
>gb|BU972798.1|BU972798 HB22L24r BC Hordeum vulgare subsp. vulgare cDNA clone HB22L24
5-PRIME, mRNA sequence
Length = 629
Score = 141 bits (302), Expect(2) = 6e-038
Identities = 59/126 (46%), Positives = 81/126 (64%)
Frame = -1 / +1
Query: 471 KGYYIEPTVFTNVKEDMIIAKEEIFGPVMCLMKFKPVEEAIARANDTRYGLGAGVVTRDL 292
KGYYI+PT+F++V++DM IA+EEIFGPV + KF + E I RAN ++YGL AGV T +L
Sbjct: 118 KGYYIQPTIFSDVQDDMKIAQEEIFGPVQSIFKFNDLNEVIKRANASQYGLAAGVFTNNL 297
Query: 291 DXXXXXXXXXXXXXXXXNCYFAMGSDCPFGGRKMSGFGKDEGMHALDKYLAVKSVVTPLR 112
D NC+ + PFGG KMSG G+++G+ +L YL VK+VVT L+
Sbjct: 298 DTANTLTRALRAGTIWVNCFDIFDAAIPFGGYKMSGIGREKGIDSLKNYLQVKAVVTALK 477
Query: 111 ASPWI* 94
W+*
Sbjct: 478 NPAWL* 495
Score = 105 bits (224), Expect(2) = 7e-024
Identities = 59/118 (50%), Positives = 65/118 (55%)
Frame = +2 / -1
Query: 116 SGVTTDLTARYLSSACMPSSLPKPLILRPPKGQSLPMAK*QFTHTTPARTDLTTRFATSR 295
S VTT LT R MP SLP PLIL PPKG + QFT PA A SR
Sbjct: 473 SAVTTALTCR*FFRLSMPFSLPMPLILYPPKGIAASKMSKQFTQIVPALRARVKVLAVSR 294
Query: 296 SRVTTPAPSPYRVSFALAIASSTGLNFIRHMTGPKISSFAMIMSSLTLVKTVGSM**P 469
V TPA +PY ++FAL I S LN TGP ISS+A+ MSS T K VG M**P
Sbjct: 293 LLVKTPAANPYWLAFALLITSLRSLNLKID*TGPNISSWAIFMSSCTSEKIVGWM**P 120
Score = 35.9 bits (72), Expect(2) = 6e-038
Identities = 14/30 (46%), Positives = 20/30 (66%)
Frame = -1 / +1
Query: 561 QYERVLSYIGHGKREGATLLTGGRPCGPEG 472
Q++++L YI G GATL+TGG G +G
Sbjct: 34 QFKKILRYIKSGVDSGATLVTGGDKLGDKG 123
Score = 24.4 bits (47), Expect(2) = 7e-024
Identities = 10/19 (52%), Positives = 11/19 (57%)
Frame = +2 / -1
Query: 473 PSGPHGLPPVKRVAPSRLP 529
P P+ PPV RVAP P
Sbjct: 122 PLSPNLSPPVTRVAPLSTP 66
>gb|BI776695.2|BI776695 EBpi07_SQ001_H11_R pistil, 12 DPA, no treatment, cv Optic, EBpi07
Hordeum vulgare subsp. vulgare cDNA clone
EBpi07_SQ001_H11 5', mRNA sequence
Length = 481
Score = 141 bits (302), Expect(2) = 1e-036
Identities = 59/126 (46%), Positives = 81/126 (64%)
Frame = -1 / +2
Query: 471 KGYYIEPTVFTNVKEDMIIAKEEIFGPVMCLMKFKPVEEAIARANDTRYGLGAGVVTRDL 292
KGYYI+PT+F++V++DM IA+EEIFGPV + KF + E I RAN ++YGL AGV T +L
Sbjct: 74 KGYYIQPTIFSDVQDDMKIAQEEIFGPVQSIFKFNDLNEVIKRANASQYGLAAGVFTNNL 253
Query: 291 DXXXXXXXXXXXXXXXXNCYFAMGSDCPFGGRKMSGFGKDEGMHALDKYLAVKSVVTPLR 112
D NC+ + PFGG KMSG G+++G+ +L YL VK+VVT L+
Sbjct: 254 DTANTLTRALKAGTIWVNCFDIFDAAIPFGGYKMSGIGREKGIDSLKNYLQVKAVVTALK 433
Query: 111 ASPWI* 94
W+*
Sbjct: 434 NPAWL* 451
Score = 105 bits (224), Expect(2) = 2e-023
Identities = 59/118 (50%), Positives = 65/118 (55%)
Frame = +2 / -2
Query: 116 SGVTTDLTARYLSSACMPSSLPKPLILRPPKGQSLPMAK*QFTHTTPARTDLTTRFATSR 295
S VTT LT R MP SLP PLIL PPKG + QFT PA A SR
Sbjct: 429 SAVTTALTCR*FFRLSMPFSLPMPLILYPPKGIAASKMSKQFTQIVPALRARVKVLAVSR 250
Query: 296 SRVTTPAPSPYRVSFALAIASSTGLNFIRHMTGPKISSFAMIMSSLTLVKTVGSM**P 469
V TPA +PY ++FAL I S LN TGP ISS+A+ MSS T K VG M**P
Sbjct: 249 LLVKTPAANPYWLAFALLITSLRSLNLKID*TGPNISSWAIFMSSCTSEKIVGWM**P 76
Score = 31.8 bits (63), Expect(2) = 1e-036
Identities = 13/26 (50%), Positives = 16/26 (61%)
Frame = -1 / +2
Query: 549 VLSYIGHGKREGATLLTGGRPCGPEG 472
+L YI G GATL+TGG G +G
Sbjct: 2 ILRYINSGVYSGATLVTGGDKLGDKG 79
Score = 23.1 bits (44), Expect(2) = 2e-023
Identities = 9/15 (60%), Positives = 10/15 (66%)
Frame = +2 / -2
Query: 473 PSGPHGLPPVKRVAP 517
P P+ PPV RVAP
Sbjct: 78 PLSPNLSPPVTRVAP 34
>gb|BQ466268.1|BQ466268 HT02B02r HT Hordeum vulgare subsp. vulgare cDNA clone HT02B02
5-PRIME, mRNA sequence
Length = 438
Score = 151 bits (325), Expect = 3e-036
Identities = 66/110 (60%), Positives = 75/110 (68%)
Frame = -1 / -3
Query: 423 MIIAKEEIFGPVMCLMKFKPVEEAIARANDTRYGLGAGVVTRDLDXXXXXXXXXXXXXXX 244
M IA+EEIFGPVM LMKFK +EE I +AN TRYGL AGVVT+++D
Sbjct: 436 MSIAQEEIFGPVMALMKFKTMEEVIQKANSTRYGLAAGVVTKNIDTMNTVSRSVRSGVVW 257
Query: 243 XNCYFAMGSDCPFGGRKMSGFGKDEGMHALDKYLAVKSVVTPLRASPWI* 94
NCYFA D PFGG KMSGFGKD G ALDKYL K+VVTPL +PW+*
Sbjct: 256 VNCYFAFDPDAPFGGCKMSGFGKDMGTDALDKYLHTKTVVTPLYNTPWL* 107
Score = 128 bits (274), Expect = 3e-029
Identities = 65/115 (56%), Positives = 74/115 (64%)
Frame = +2 / +3
Query: 80 EIKENQIQGEARSGVTTDLTARYLSSACMPSSLPKPLILRPPKGQSLPMAK*QFTHTTPA 259
+++ + QG SGVTT L RYLS A +P SLPKPLIL+PP G S AK*Q T TTP
Sbjct: 93 DVRPDHNQGVL*SGVTTVLVCRYLSRASVPMSLPKPLILQPPNGASGSKAK*QLTQTTPD 272
Query: 260 RTDLTTRFATSRSRVTTPAPSPYRVSFALAIASSTGLNFIRHMTGPKISSFAMIM 424
TD T F S VTTPA P RV FA I SS LNF+R +TGPKISS A+ M
Sbjct: 273 LTDRDTVFMVSMFLVTTPAARP*RVLFAF*ITSSIVLNFMRAITGPKISSCAIDM 437
>gb|AV913129.1|AV913129 AV913129 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags11p17 5', mRNA sequence
Length = 552
Score = 117 bits (251), Expect(2) = 7e-036
Identities = 49/82 (59%), Positives = 58/82 (70%)
Frame = -1 / +3
Query: 471 KGYYIEPTVFTNVKEDMIIAKEEIFGPVMCLMKFKPVEEAIARANDTRYGLGAGVVTRDL 292
KGYYIEP +FT+VK+DM IA+EEIFGPVM LMKFK +EE I +AN TRYGL AGVVT+++
Sbjct: 303 KGYYIEPAIFTDVKDDMSIAQEEIFGPVMALMKFKTMEEVIQKANSTRYGLAAGVVTKNI 482
Query: 291 DXXXXXXXXXXXXXXXXNCYFA 226
D NCYFA
Sbjct: 483 DTMNTVSRSVRSGVVWVNCYFA 548
Score = 100 bits (213), Expect(2) = 9e-027
Identities = 52/81 (64%), Positives = 55/81 (67%)
Frame = +2 / -3
Query: 227 AK*QFTHTTPARTDLTTRFATSRSRVTTPAPSPYRVSFALAIASSTGLNFIRHMTGPKIS 406
AK*Q T TTP TD T F S VTTPA PYRV FA I SS LNF+R +TGPKIS
Sbjct: 547 AK*QLTQTTPDLTDRDTVFMVSMFLVTTPAARPYRVLFAF*ITSSIVLNFMRAITGPKIS 368
Query: 407 SFAMIMSSLTLVKTVGSM**P 469
S A+ MSSLT VK GSM**P
Sbjct: 367 SCAIDMSSLTSVKMAGSM**P 305
Score = 52.4 bits (108), Expect(2) = 7e-036
Identities = 21/32 (65%), Positives = 24/32 (75%)
Frame = -1 / +3
Query: 567 KAQYERVLSYIGHGKREGATLLTGGRPCGPEG 472
K QYE+VL YI GK EGATLLTGG+ C +G
Sbjct: 213 KNQYEKVLKYIDVGKSEGATLLTGGKACSDKG 308
Score = 39.1 bits (79), Expect(2) = 9e-027
Identities = 19/32 (59%), Positives = 19/32 (59%)
Frame = +2 / -3
Query: 473 PSGPHGLPPVKRVAPSRLPWPM*LRTLSY*AL 568
P PPV RVAPS LP M LRT SY* L
Sbjct: 307 PLSLQAFPPVSRVAPSLLPTSMYLRTFSY*FL 212
>gb|CV060332.1|CV060332 BNEL57a10 Barley EST endosperm library Hordeum vulgare subsp.
vulgare cDNA clone BNEL57a10 5' similar to cytosolic
aldehyde dehydrogenase RF2C, mRNA sequence
Length = 551
Score = 146 bits (314), Expect = 8e-035
Identities = 61/90 (67%), Positives = 70/90 (77%)
Frame = -1 / +1
Query: 363 VEEAIARANDTRYGLGAGVVTRDLDXXXXXXXXXXXXXXXXNCYFAMGSDCPFGGRKMSG 184
VEEAIARAN+TRYGL AGVVT+++D NCYFAM SDCPFGGRKMSG
Sbjct: 7 VEEAIARANNTRYGLAAGVVTKNIDVANRMTRSIRAGVVWVNCYFAMDSDCPFGGRKMSG 186
Query: 183 FGKDEGMHALDKYLAVKSVVTPLRASPWI* 94
FGKD+GMHALDK+LAVK+VVTP+ SPW+*
Sbjct: 187 FGKDDGMHALDKFLAVKAVVTPVYDSPWL* 276
Score = 144 bits (308), Expect = 6e-034
Identities = 67/88 (76%), Positives = 69/88 (78%)
Frame = +2 / -1
Query: 101 QGEARSGVTTDLTARYLSSACMPSSLPKPLILRPPKGQSLPMAK*QFTHTTPARTDLTTR 280
QGE+ +GVTT LTAR LSSACMPSSLP PLILRPP GQSL MAK*QFTHTTPAR D
Sbjct: 269 QGES*TGVTTALTARNLSSACMPSSLPNPLILRPPNGQSLSMAK*QFTHTTPARIDRVIL 90
Query: 281 FATSRSRVTTPAPSPYRVSFALAIASST 364
ATS VTTPA SPY V ALAIASST
Sbjct: 89 LATSMFLVTTPAASPYLVLLALAIASST 6
>gb|BI949913.1|BI949913 HVSMEl0016O20f Hordeum vulgare spike EST library HVcDNA0012
(Fusarium infected) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEl0016O20f, mRNA sequence
Length = 440
Score = 130 bits (279), Expect(2) = 8e-035
Identities = 54/114 (47%), Positives = 72/114 (63%)
Frame = -1 / +3
Query: 471 KGYYIEPTVFTNVKEDMIIAKEEIFGPVMCLMKFKPVEEAIARANDTRYGLGAGVVTRDL 292
KGYYI+PT+F++V++DM IA+EEIFGPV + KF + E I RAN ++YGL AGV T +L
Sbjct: 99 KGYYIQPTIFSDVQDDMKIAQEEIFGPVQSIFKFNDLNEVIKRANASQYGLAAGVFTNNL 278
Query: 291 DXXXXXXXXXXXXXXXXNCYFAMGSDCPFGGRKMSGFGKDEGMHALDKYLAVKS 130
D NC+ + PFGG KM G G+D+G H+L YL VK+
Sbjct: 279 DTANTLTRALRAGTIWVNCFDMFNAAIPFGGYKMIGIGRDKGNHSLKNYLQVKA 440
Score = 35.9 bits (72), Expect(2) = 8e-035
Identities = 14/30 (46%), Positives = 20/30 (66%)
Frame = -1 / +3
Query: 561 QYERVLSYIGHGKREGATLLTGGRPCGPEG 472
Q++++L YI G GATL+TGG G +G
Sbjct: 15 QFKKILRYIKSGVDSGATLVTGGDKLGDKG 104
>gb|BF267588.2|BF267588 HV_CEa0018F16f Hordeum vulgare seedling green leaf EST library
HVcDNA0004 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEa0018F16f, mRNA sequence
Length = 808
Score = 91.8 bits (194), Expect(3) = 2e-034
Identities = 36/61 (59%), Positives = 47/61 (77%)
Frame = -1 / +2
Query: 471 KGYYIEPTVFTNVKEDMIIAKEEIFGPVMCLMKFKPVEEAIARANDTRYGLGAGVVTRDL 292
KGYYI+PT+F++V++DM IA+EEIFGPV + KF + E I RAN +YGL AGV T +L
Sbjct: 182 KGYYIQPTIFSDVQDDMKIAQEEIFGPVQSIFKFNDLNEVIKRANACQYGLAAGVFTNNL 361
Query: 291 D 289
D
Sbjct: 362 D 364
Score = 56.1 bits (116), Expect(3) = 2e-034
Identities = 21/46 (45%), Positives = 30/46 (65%)
Frame = -1 / +3
Query: 237 CYFAMGSDCPFGGRKMSGFGKDEGMHALDKYLAVKSVVTPLRASPW 100
C+ + PFGG KMSG G+++G+H+L YL VK+V T L+ W
Sbjct: 417 CFDIFDAAIPFGGYKMSGIGREKGIHSLKNYLQVKAVRTALKNPAW 554
Score = 35.9 bits (72), Expect(3) = 2e-034
Identities = 14/30 (46%), Positives = 20/30 (66%)
Frame = -1 / +2
Query: 561 QYERVLSYIGHGKREGATLLTGGRPCGPEG 472
Q++++L YI G GATL+TGG G +G
Sbjct: 98 QFKKILRYIKSGVDSGATLVTGGDKLGDKG 187
>gb|BJ545810.1|BJ545810 BJ545810 K. Sato unpublished cDNA library, cv. Akashinriki
vegetative stage leaves Hordeum vulgare subsp. vulgare
cDNA clone baak26h06 3', mRNA sequence
Length = 672
Score = 141 bits (302), Expect(2) = 3e-034
Identities = 59/126 (46%), Positives = 81/126 (64%)
Frame = -1 / -2
Query: 471 KGYYIEPTVFTNVKEDMIIAKEEIFGPVMCLMKFKPVEEAIARANDTRYGLGAGVVTRDL 292
KGYYI+PT+F++V++DM IA+EEIFGPV + KF + E I RAN ++YGL AGV T +L
Sbjct: 632 KGYYIQPTIFSDVQDDMKIAQEEIFGPVQSIFKFNDLNEVIKRANASQYGLAAGVFTNNL 453
Query: 291 DXXXXXXXXXXXXXXXXNCYFAMGSDCPFGGRKMSGFGKDEGMHALDKYLAVKSVVTPLR 112
D NC+ + PFGG KMSG G+++G+ +L YL VK+VVT L+
Sbjct: 452 DTANTLTRALRAGTIWVNCFDIFDAAIPFGGYKMSGIGREKGIDSLKNYLQVKAVVTALK 273
Query: 111 ASPWI* 94
W+*
Sbjct: 272 NPAWL* 255
Score = 105 bits (224), Expect(2) = 2e-023
Identities = 59/118 (50%), Positives = 65/118 (55%)
Frame = +2 / +1
Query: 116 SGVTTDLTARYLSSACMPSSLPKPLILRPPKGQSLPMAK*QFTHTTPARTDLTTRFATSR 295
S VTT LT R MP SLP PLIL PPKG + QFT PA A SR
Sbjct: 277 SAVTTALTCR*FFRLSMPFSLPMPLILYPPKGIAASKMSKQFTQIVPALRARVKVLAVSR 456
Query: 296 SRVTTPAPSPYRVSFALAIASSTGLNFIRHMTGPKISSFAMIMSSLTLVKTVGSM**P 469
V TPA +PY ++FAL I S LN TGP ISS+A+ MSS T K VG M**P
Sbjct: 457 LLVKTPAANPYWLAFALLITSLRSLNLKID*TGPNISSWAIFMSSCTSEKIVGWM**P 630
Score = 23.5 bits (45), Expect(2) = 3e-034
Identities = 9/15 (60%), Positives = 11/15 (73%)
Frame = -1 / -2
Query: 516 GATLLTGGRPCGPEG 472
GATL+TGG G +G
Sbjct: 671 GATLVTGGDKLGDKG 627
Score = 23.1 bits (44), Expect(2) = 2e-023
Identities = 9/15 (60%), Positives = 10/15 (66%)
Frame = +2 / +1
Query: 473 PSGPHGLPPVKRVAP 517
P P+ PPV RVAP
Sbjct: 628 PLSPNLSPPVTRVAP 672
>gb|AV921807.1|AV921807 AV921807 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags12o18 3', mRNA sequence
Length = 657
Score = 141 bits (302), Expect = 4e-033
Identities = 59/126 (46%), Positives = 81/126 (64%)
Frame = -1 / -2
Query: 471 KGYYIEPTVFTNVKEDMIIAKEEIFGPVMCLMKFKPVEEAIARANDTRYGLGAGVVTRDL 292
KGYYI+PT+F++V++DM IA+EEIFGPV + KF + E I RAN ++YGL AGV T +L
Sbjct: 617 KGYYIQPTIFSDVQDDMKIAQEEIFGPVQSIFKFNDLNEVIKRANASQYGLAAGVFTNNL 438
Query: 291 DXXXXXXXXXXXXXXXXNCYFAMGSDCPFGGRKMSGFGKDEGMHALDKYLAVKSVVTPLR 112
D NC+ + PFGG KMSG G+++G+ +L YL VK+VVT L+
Sbjct: 437 DTANTLTRALRAGTIWVNCFDIFDAAIPFGGYKMSGIGREKGIDSLKNYLQVKAVVTALK 258
Query: 111 ASPWI* 94
W+*
Sbjct: 257 NPAWL* 240
Score = 105 bits (224), Expect = 2e-022
Identities = 59/118 (50%), Positives = 65/118 (55%)
Frame = +2 / +1
Query: 116 SGVTTDLTARYLSSACMPSSLPKPLILRPPKGQSLPMAK*QFTHTTPARTDLTTRFATSR 295
S VTT LT R MP SLP PLIL PPKG + QFT PA A SR
Sbjct: 262 SAVTTALTCR*FFRLSMPFSLPMPLILYPPKGIAASKMSKQFTQIVPALRARVKVLAVSR 441
Query: 296 SRVTTPAPSPYRVSFALAIASSTGLNFIRHMTGPKISSFAMIMSSLTLVKTVGSM**P 469
V TPA +PY ++FAL I S LN TGP ISS+A+ MSS T K VG M**P
Sbjct: 442 LLVKTPAANPYWLAFALLITSLRSLNLKID*TGPNISSWAIFMSSCTSEKIVGWM**P 615
>gb|BJ545985.1|BJ545985 BJ545985 K. Sato unpublished cDNA library, cv. Akashinriki
vegetative stage leaves Hordeum vulgare subsp. vulgare
cDNA clone baak30h11 3', mRNA sequence
Length = 624
Score = 141 bits (302), Expect = 4e-033
Identities = 59/126 (46%), Positives = 81/126 (64%)
Frame = -1 / -3
Query: 471 KGYYIEPTVFTNVKEDMIIAKEEIFGPVMCLMKFKPVEEAIARANDTRYGLGAGVVTRDL 292
KGYYI+PT+F++V++DM IA+EEIFGPV + KF + E I RAN ++YGL AGV T +L
Sbjct: 604 KGYYIQPTIFSDVQDDMKIAQEEIFGPVQSIFKFNDLNEVIKRANASQYGLAAGVFTNNL 425
Query: 291 DXXXXXXXXXXXXXXXXNCYFAMGSDCPFGGRKMSGFGKDEGMHALDKYLAVKSVVTPLR 112
D NC+ + PFGG KMSG G+++G+ +L YL VK+VVT L+
Sbjct: 424 DTANTLTRALRAGTIWVNCFDIFDAAIPFGGYKMSGIGREKGIDSLKNYLQVKAVVTALK 245
Query: 111 ASPWI* 94
W+*
Sbjct: 244 NPAWL* 227
Score = 105 bits (224), Expect = 2e-022
Identities = 59/118 (50%), Positives = 65/118 (55%)
Frame = +2 / +3
Query: 116 SGVTTDLTARYLSSACMPSSLPKPLILRPPKGQSLPMAK*QFTHTTPARTDLTTRFATSR 295
S VTT LT R MP SLP PLIL PPKG + QFT PA A SR
Sbjct: 249 SAVTTALTCR*FFRLSMPFSLPMPLILYPPKGIAASKMSKQFTQIVPALRARVKVLAVSR 428
Query: 296 SRVTTPAPSPYRVSFALAIASSTGLNFIRHMTGPKISSFAMIMSSLTLVKTVGSM**P 469
V TPA +PY ++FAL I S LN TGP ISS+A+ MSS T K VG M**P
Sbjct: 429 LLVKTPAANPYWLAFALLITSLRSLNLKID*TGPNISSWAIFMSSCTSEKIVGWM**P 602
>gb|BJ548158.1|BJ548158 BJ548158 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal13d19 3', mRNA sequence
Length = 620
Score = 141 bits (302), Expect = 4e-033
Identities = 59/126 (46%), Positives = 81/126 (64%)
Frame = -1 / -2
Query: 471 KGYYIEPTVFTNVKEDMIIAKEEIFGPVMCLMKFKPVEEAIARANDTRYGLGAGVVTRDL 292
KGYYI+PT+F++V++DM IA+EEIFGPV + KF + E I RAN ++YGL AGV T +L
Sbjct: 607 KGYYIQPTIFSDVQDDMKIAQEEIFGPVQSIFKFNDLNEVIKRANASQYGLAAGVFTNNL 428
Query: 291 DXXXXXXXXXXXXXXXXNCYFAMGSDCPFGGRKMSGFGKDEGMHALDKYLAVKSVVTPLR 112
D NC+ + PFGG KMSG G+++G+ +L YL VK+VVT L+
Sbjct: 427 DTANTLTRALRAGTIWVNCFDIFDAAIPFGGYKMSGIGREKGIDSLKNYLQVKAVVTALK 248
Query: 111 ASPWI* 94
W+*
Sbjct: 247 NPAWL* 230
Score = 105 bits (224), Expect = 2e-022
Identities = 59/118 (50%), Positives = 65/118 (55%)
Frame = +2 / +3
Query: 116 SGVTTDLTARYLSSACMPSSLPKPLILRPPKGQSLPMAK*QFTHTTPARTDLTTRFATSR 295
S VTT LT R MP SLP PLIL PPKG + QFT PA A SR
Sbjct: 252 SAVTTALTCR*FFRLSMPFSLPMPLILYPPKGIAASKMSKQFTQIVPALRARVKVLAVSR 431
Query: 296 SRVTTPAPSPYRVSFALAIASSTGLNFIRHMTGPKISSFAMIMSSLTLVKTVGSM**P 469
V TPA +PY ++FAL I S LN TGP ISS+A+ MSS T K VG M**P
Sbjct: 432 LLVKTPAANPYWLAFALLITSLRSLNLKID*TGPNISSWAIFMSSCTSEKIVGWM**P 605
>gb|AW983019.2|AW983019 HVSMEg0004N09f Hordeum vulgare pre-anthesis spike EST library
HVcDNA0008 (white to yellow anther) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEg0004N09f, mRNA sequence
Length = 614
Score = 138 bits (296), Expect = 3e-032
Identities = 58/126 (46%), Positives = 80/126 (63%)
Frame = -1 / +1
Query: 471 KGYYIEPTVFTNVKEDMIIAKEEIFGPVMCLMKFKPVEEAIARANDTRYGLGAGVVTRDL 292
KGYYI+PT+F++V++DM IA EEIFGPV + KF + E I AN ++YGL AGV T +L
Sbjct: 16 KGYYIQPTIFSDVQDDMKIAHEEIFGPVQSIFKFNDLNEVIKMANASQYGLAAGVFTNNL 195
Query: 291 DXXXXXXXXXXXXXXXXNCYFAMGSDCPFGGRKMSGFGKDEGMHALDKYLAVKSVVTPLR 112
D NC+ + PFGG KMSG G+++G+ +L+ YL VK+VVT L+
Sbjct: 196 DTANTLTRALKAGTIWVNCFDIFDAAIPFGGYKMSGIGREKGIDSLNNYLQVKAVVTALK 375
Query: 111 ASPWI* 94
W+*
Sbjct: 376 NPAWL* 393
Score = 106 bits (226), Expect = 1e-022
Identities = 59/118 (50%), Positives = 66/118 (55%)
Frame = +2 / -1
Query: 116 SGVTTDLTARYLSSACMPSSLPKPLILRPPKGQSLPMAK*QFTHTTPARTDLTTRFATSR 295
S VTT LT R L MP SLP PLIL PPKG + QFT PA A SR
Sbjct: 371 SAVTTALTCR*LFRLSMPFSLPMPLILYPPKGIAASKMSKQFTQIVPALRARVKVLAVSR 192
Query: 296 SRVTTPAPSPYRVSFALAIASSTGLNFIRHMTGPKISSFAMIMSSLTLVKTVGSM**P 469
V TPA +PY ++FA+ I S LN TGP ISS+A+ MSS T K VG M**P
Sbjct: 191 LLVKTPAANPYWLAFAILITSLRSLNLKID*TGPNISSWAIFMSSCTSEKIVGWM**P 18
>gb|BF260313.2|BF260313 HVSMEf0021K17f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEf0021K17f, mRNA sequence
Length = 542
Score = 96.4 bits (204), Expect(2) = 2e-031
Identities = 39/53 (73%), Positives = 46/53 (86%)
Frame = -1 / +3
Query: 471 KGYYIEPTVFTNVKEDMIIAKEEIFGPVMCLMKFKPVEEAIARANDTRYGLGA 313
KGYYIEPT+F +VKEDM IA++EIFGPVM LMKFK V+EAI +AN T+YGL A
Sbjct: 384 KGYYIEPTIFADVKEDMKIAQDEIFGPVMSLMKFKTVDEAIEKANCTKYGLAA 542
Score = 59.3 bits (123), Expect(2) = 2e-031
Identities = 23/32 (71%), Positives = 26/32 (81%)
Frame = -1 / +3
Query: 567 KAQYERVLSYIGHGKREGATLLTGGRPCGPEG 472
K Q+ERVL YI HGK EGATLLTGG+P G +G
Sbjct: 294 KEQFERVLKYIEHGKSEGATLLTGGKPAGDKG 389
>dbj|AB063179.1| Hordeum vulgare BBD1 mRNA for betaine aldehyde dehydrogenase,
complete cds
Length = 1909
Score = 111 bits (236), Expect(2) = 5e-030
Identities = 45/93 (48%), Positives = 61/93 (65%)
Frame = -1 / +3
Query: 567 KAQYERVLSYIGHGKREGATLLTGGRPCGPEGKGYYIEPTVFTNVKEDMIIAKEEIFGPV 388
K QYE++ +I + EGAT+L GG GKG++IEPT+ T V M I +EE+FGPV
Sbjct: 1092 KGQYEKIKKFISTARSEGATILHGGDRPKNLGKGFFIEPTIITGVSTSMQIWREEVFGPV 1271
Query: 387 MCLMKFKPVEEAIARANDTRYGLGAGVVTRDLD 289
+C+ FK EA+ ANDT YGL GV++ DL+
Sbjct: 1272 ICVKVFKTESEAVELANDTHYGLAGGVISDDLE 1370
Score = 39.6 bits (80), Expect(2) = 5e-030
Identities = 15/28 (53%), Positives = 20/28 (71%)
Frame = -1 / +3
Query: 210 PFGGRKMSGFGKDEGMHALDKYLAVKSV 127
P+GG K SGFG++ G L+ YL+VK V
Sbjct: 1449 PWGGNKRSGFGRELGEWGLENYLSVKQV 1532
>gb|BJ548794.1|BJ548794 BJ548794 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal35m14 3', mRNA sequence
Length = 581
Score = 127 bits (271), Expect = 7e-029
Identities = 54/120 (45%), Positives = 75/120 (62%)
Frame = -1 / -2
Query: 453 PTVFTNVKEDMIIAKEEIFGPVMCLMKFKPVEEAIARANDTRYGLGAGVVTRDLDXXXXX 274
PT+F++V++DM IA+EEIFGPV + KF + E I RAN ++YGL AGV T +LD
Sbjct: 580 PTIFSDVQDDMKIAQEEIFGPVQSIFKFNDLNEVIKRANASQYGLAAGVFTNNLDTANTL 401
Query: 273 XXXXXXXXXXXNCYFAMGSDCPFGGRKMSGFGKDEGMHALDKYLAVKSVVTPLRASPWI* 94
NC+ + PFGG KMSG G+++G+ +L YL VK+VVT L+ W+*
Sbjct: 400 TRALRAGTIWVNCFDIFDAAIPFGGYKMSGIGREKGIDSLKNYLQVKAVVTALKNPAWL* 221
Score = 100 bits (213), Expect = 7e-021
Identities = 55/113 (48%), Positives = 61/113 (53%)
Frame = +2 / +3
Query: 116 SGVTTDLTARYLSSACMPSSLPKPLILRPPKGQSLPMAK*QFTHTTPARTDLTTRFATSR 295
S VTT LT R MP SLP PLIL PPKG + QFT PA A SR
Sbjct: 243 SAVTTALTCR*FFRLSMPFSLPMPLILYPPKGIAASKMSKQFTQIVPALRARVKVLAVSR 422
Query: 296 SRVTTPAPSPYRVSFALAIASSTGLNFIRHMTGPKISSFAMIMSSLTLVKTVG 454
V TPA +PY ++FAL I S LN TGP ISS+A+ MSS T K VG
Sbjct: 423 LLVKTPAANPYWLAFALLITSLRSLNLKID*TGPNISSWAIFMSSCTSEKIVG 581
>dbj|AB063178.1| Hordeum vulgare BBD2 mRNA for betaine aldehyde dehydrogenase,
complete cds
Length = 1889
Score = 80.8 bits (170), Expect(3) = 2e-028
Identities = 30/59 (50%), Positives = 42/59 (71%)
Frame = -1 / +2
Query: 471 KGYYIEPTVFTNVKEDMIIAKEEIFGPVMCLMKFKPVEEAIARANDTRYGLGAGVVTRD 295
KG++IEPT+ T++ M I +EE+FGPV+C+ +F EEAI ANDT YGL V++ D
Sbjct: 1160 KGFFIEPTIITDINTSMEIWREEVFGPVLCVKEFSTEEEAIELANDTHYGLAGAVISGD 1336
Score = 45.1 bits (92), Expect(3) = 2e-028
Identities = 16/37 (43%), Positives = 23/37 (62%)
Frame = -1 / +2
Query: 210 PFGGRKMSGFGKDEGMHALDKYLAVKSVVTPLRASPW 100
P+GG K SGFG++ G +D YL++K V +PW
Sbjct: 1421 PWGGNKRSGFGRELGEGGIDNYLSIKQVTEYTSDAPW 1531
Score = 37.3 bits (75), Expect(3) = 2e-028
Identities = 12/25 (48%), Positives = 19/25 (76%)
Frame = -1 / +2
Query: 567 KAQYERVLSYIGHGKREGATLLTGG 493
+ QYE++ ++ + K EGAT+LTGG
Sbjct: 1064 EGQYEKIKKFVANAKTEGATILTGG 1138
>gb|BG368878.2|BG368878 HVSMEi0021B19f Hordeum vulgare 20 DAP spike EST library HVcDNA0010
(20 DAP) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEi0021B19f, mRNA sequence
Length = 749
Score = 80.8 bits (170), Expect(3) = 2e-028
Identities = 30/59 (50%), Positives = 42/59 (71%)
Frame = -1 / +2
Query: 471 KGYYIEPTVFTNVKEDMIIAKEEIFGPVMCLMKFKPVEEAIARANDTRYGLGAGVVTRD 295
KG++IEPT+ T++ M I +EE+FGPV+C+ +F EEAI ANDT YGL V++ D
Sbjct: 167 KGFFIEPTIITDINTSMEIWREEVFGPVLCVKEFSTEEEAIELANDTHYGLAGAVISGD 343
Score = 45.1 bits (92), Expect(3) = 2e-028
Identities = 16/37 (43%), Positives = 23/37 (62%)
Frame = -1 / +2
Query: 210 PFGGRKMSGFGKDEGMHALDKYLAVKSVVTPLRASPW 100
P+GG K SGFG++ G +D YL++K V +PW
Sbjct: 428 PWGGNKRSGFGRELGEGGIDNYLSIKQVTEYTSDAPW 538
Score = 37.3 bits (75), Expect(3) = 2e-028
Identities = 12/25 (48%), Positives = 19/25 (76%)
Frame = -1 / +2
Query: 567 KAQYERVLSYIGHGKREGATLLTGG 493
+ QYE++ ++ + K EGAT+LTGG
Sbjct: 71 EGQYEKIKKFVANAKTEGATILTGG 145
>gb|BJ468318.1|BJ468318 BJ468318 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags38d10 3', mRNA sequence
Length = 713
Score = 80.8 bits (170), Expect(3) = 2e-028
Identities = 30/59 (50%), Positives = 42/59 (71%)
Frame = -1 / -3
Query: 471 KGYYIEPTVFTNVKEDMIIAKEEIFGPVMCLMKFKPVEEAIARANDTRYGLGAGVVTRD 295
KG++IEPT+ T++ M I +EE+FGPV+C+ +F EEAI ANDT YGL V++ D
Sbjct: 525 KGFFIEPTIITDINTSMEIWREEVFGPVLCVKEFSTEEEAIELANDTHYGLAGAVISGD 349
Score = 45.1 bits (92), Expect(3) = 2e-028
Identities = 16/37 (43%), Positives = 23/37 (62%)
Frame = -1 / -3
Query: 210 PFGGRKMSGFGKDEGMHALDKYLAVKSVVTPLRASPW 100
P+GG K SGFG++ G +D YL++K V +PW
Sbjct: 264 PWGGNKRSGFGRELGEGGIDNYLSIKQVTEYTSDAPW 154
Score = 37.3 bits (75), Expect(3) = 2e-028
Identities = 12/25 (48%), Positives = 19/25 (76%)
Frame = -1 / -3
Query: 567 KAQYERVLSYIGHGKREGATLLTGG 493
+ QYE++ ++ + K EGAT+LTGG
Sbjct: 621 EGQYEKIKKFVANAKTEGATILTGG 547
>gb|BJ475971.1|BJ475971 BJ475971 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal30n10 3', mRNA sequence
Length = 708
Score = 80.8 bits (170), Expect(3) = 2e-028
Identities = 30/59 (50%), Positives = 42/59 (71%)
Frame = -1 / -3
Query: 471 KGYYIEPTVFTNVKEDMIIAKEEIFGPVMCLMKFKPVEEAIARANDTRYGLGAGVVTRD 295
KG++IEPT+ T++ M I +EE+FGPV+C+ +F EEAI ANDT YGL V++ D
Sbjct: 586 KGFFIEPTIITDINTSMEIWREEVFGPVLCVKEFSTEEEAIELANDTHYGLAGAVISGD 410
Score = 45.1 bits (92), Expect(3) = 2e-028
Identities = 16/37 (43%), Positives = 23/37 (62%)
Frame = -1 / -3
Query: 210 PFGGRKMSGFGKDEGMHALDKYLAVKSVVTPLRASPW 100
P+GG K SGFG++ G +D YL++K V +PW
Sbjct: 325 PWGGNKRSGFGRELGEGGIDNYLSIKQVTEYTSDAPW 215
Score = 37.3 bits (75), Expect(3) = 2e-028
Identities = 12/25 (48%), Positives = 19/25 (76%)
Frame = -1 / -3
Query: 567 KAQYERVLSYIGHGKREGATLLTGG 493
+ QYE++ ++ + K EGAT+LTGG
Sbjct: 682 EGQYEKIKKFVANAKTEGATILTGG 608
>gb|BJ466421.1|BJ466421 BJ466421 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags32a22 3', mRNA sequence
Length = 614
Score = 80.8 bits (170), Expect(3) = 2e-028
Identities = 30/59 (50%), Positives = 42/59 (71%)
Frame = -1 / -3
Query: 471 KGYYIEPTVFTNVKEDMIIAKEEIFGPVMCLMKFKPVEEAIARANDTRYGLGAGVVTRD 295
KG++IEPT+ T++ M I +EE+FGPV+C+ +F EEAI ANDT YGL V++ D
Sbjct: 492 KGFFIEPTIITDINTSMEIWREEVFGPVLCVKEFSTEEEAIELANDTHYGLAGAVISGD 316
Score = 45.1 bits (92), Expect(3) = 2e-028
Identities = 16/37 (43%), Positives = 23/37 (62%)
Frame = -1 / -3
Query: 210 PFGGRKMSGFGKDEGMHALDKYLAVKSVVTPLRASPW 100
P+GG K SGFG++ G +D YL++K V +PW
Sbjct: 231 PWGGNKRSGFGRELGEGGIDNYLSIKQVTEYTSDAPW 121
Score = 37.3 bits (75), Expect(3) = 2e-028
Identities = 12/25 (48%), Positives = 19/25 (76%)
Frame = -1 / -3
Query: 567 KAQYERVLSYIGHGKREGATLLTGG 493
+ QYE++ ++ + K EGAT+LTGG
Sbjct: 588 EGQYEKIKKFVANAKTEGATILTGG 514
>gb|BJ471121.1|BJ471121 BJ471121 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal30n10 5', mRNA sequence
Length = 576
Score = 80.8 bits (170), Expect(3) = 2e-028
Identities = 30/59 (50%), Positives = 42/59 (71%)
Frame = -1 / +2
Query: 471 KGYYIEPTVFTNVKEDMIIAKEEIFGPVMCLMKFKPVEEAIARANDTRYGLGAGVVTRD 295
KG++IEPT+ T++ M I +EE+FGPV+C+ +F EEAI ANDT YGL V++ D
Sbjct: 194 KGFFIEPTIITDINTSMEIWREEVFGPVLCVKEFSTEEEAIELANDTHYGLAGAVISGD 370
Score = 45.1 bits (92), Expect(3) = 2e-028
Identities = 16/37 (43%), Positives = 23/37 (62%)
Frame = -1 / +2
Query: 210 PFGGRKMSGFGKDEGMHALDKYLAVKSVVTPLRASPW 100
P+GG K SGFG++ G +D YL++K V +PW
Sbjct: 455 PWGGNKRSGFGRELGEGGIDNYLSIKQVTEYTSDAPW 565
Score = 37.3 bits (75), Expect(3) = 2e-028
Identities = 12/25 (48%), Positives = 19/25 (76%)
Frame = -1 / +2
Query: 567 KAQYERVLSYIGHGKREGATLLTGG 493
+ QYE++ ++ + K EGAT+LTGG
Sbjct: 98 EGQYEKIKKFVANAKTEGATILTGG 172
>gb|BM371740.2|BM371740 EBma08_SQ003_M14_R maternal, 28 DPA, no treatment, cv Optic, EBma08
Hordeum vulgare subsp. vulgare cDNA clone
EBma08_SQ003_M14 5', mRNA sequence
Length = 482
Score = 80.8 bits (170), Expect(3) = 2e-028
Identities = 30/59 (50%), Positives = 42/59 (71%)
Frame = -1 / +2
Query: 471 KGYYIEPTVFTNVKEDMIIAKEEIFGPVMCLMKFKPVEEAIARANDTRYGLGAGVVTRD 295
KG++IEPT+ T++ M I +EE+FGPV+C+ +F EEAI ANDT YGL V++ D
Sbjct: 110 KGFFIEPTIITDINTSMEIWREEVFGPVLCVKEFSTEEEAIELANDTHYGLAGAVISGD 286
Score = 45.1 bits (92), Expect(3) = 2e-028
Identities = 16/37 (43%), Positives = 23/37 (62%)
Frame = -1 / +2
Query: 210 PFGGRKMSGFGKDEGMHALDKYLAVKSVVTPLRASPW 100
P+GG K SGFG++ G +D YL++K V +PW
Sbjct: 371 PWGGNKRSGFGRELGEGGIDNYLSIKQVTEYTSDAPW 481
Score = 37.3 bits (75), Expect(3) = 2e-028
Identities = 12/25 (48%), Positives = 19/25 (76%)
Frame = -1 / +2
Query: 567 KAQYERVLSYIGHGKREGATLLTGG 493
+ QYE++ ++ + K EGAT+LTGG
Sbjct: 14 EGQYEKIKKFVANAKTEGATILTGG 88
>gb|BU975354.1|BU975354 HB30O13r BC Hordeum vulgare subsp. vulgare cDNA clone HB30O13
5-PRIME, mRNA sequence
Length = 474
Score = 80.8 bits (170), Expect(3) = 6e-027
Identities = 30/59 (50%), Positives = 42/59 (71%)
Frame = -1 / +3
Query: 471 KGYYIEPTVFTNVKEDMIIAKEEIFGPVMCLMKFKPVEEAIARANDTRYGLGAGVVTRD 295
KG++IEPT+ T++ M I +EE+FGPV+C+ +F EEAI ANDT YGL V++ D
Sbjct: 114 KGFFIEPTIITDINTSMEIWREEVFGPVLCVKEFSTEEEAIELANDTHYGLAGAVISGD 290
Score = 40.0 bits (81), Expect(3) = 6e-027
Identities = 14/28 (50%), Positives = 20/28 (71%)
Frame = -1 / +3
Query: 210 PFGGRKMSGFGKDEGMHALDKYLAVKSV 127
P+GG K SGFG++ G +D YL++K V
Sbjct: 375 PWGGNKRSGFGRELGEGGIDNYLSIKQV 458
Score = 37.3 bits (75), Expect(3) = 6e-027
Identities = 12/25 (48%), Positives = 19/25 (76%)
Frame = -1 / +3
Query: 567 KAQYERVLSYIGHGKREGATLLTGG 493
+ QYE++ ++ + K EGAT+LTGG
Sbjct: 18 EGQYEKIKKFVANAKTEGATILTGG 92
>gb|AV931272.1|AV931272 AV931272 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp.
vulgare cDNA clone basd19d07 3', mRNA sequence
Length = 556
Score = 117 bits (250), Expect = 6e-026
Identities = 51/116 (43%), Positives = 71/116 (61%)
Frame = -1 / -2
Query: 441 TNVKEDMIIAKEEIFGPVMCLMKFKPVEEAIARANDTRYGLGAGVVTRDLDXXXXXXXXX 262
++V++DM IA+EEIFGPV + KF + E I RAN ++YGL AGV T +LD
Sbjct: 555 SDVQDDMKIAQEEIFGPVQSIFKFNDLNEVIKRANASQYGLAAGVFTNNLDTANTLTRAL 376
Query: 261 XXXXXXXNCYFAMGSDCPFGGRKMSGFGKDEGMHALDKYLAVKSVVTPLRASPWI* 94
NC+ + PFGG KMSG G+++G+ +L YL VK+VVT L+ W+*
Sbjct: 375 RAGTIWVNCFDIFDAAIPFGGYKMSGIGREKGIDSLKNYLQVKAVVTALKNPAWL* 208
>gb|BJ473517.1|BJ473517 BJ473517 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal12p17 3', mRNA sequence
Length = 705
Score = 80.8 bits (170), Expect(3) = 9e-026
Identities = 30/59 (50%), Positives = 42/59 (71%)
Frame = -1 / -1
Query: 471 KGYYIEPTVFTNVKEDMIIAKEEIFGPVMCLMKFKPVEEAIARANDTRYGLGAGVVTRD 295
KG++IEPT+ T++ M I +EE+FGPV+C+ +F EEAI ANDT YGL V++ D
Sbjct: 627 KGFFIEPTIITDINTSMEIWREEVFGPVLCVKEFSTEEEAIELANDTHYGLAGAVISGD 451
Score = 45.1 bits (92), Expect(3) = 9e-026
Identities = 16/37 (43%), Positives = 23/37 (62%)
Frame = -1 / -1
Query: 210 PFGGRKMSGFGKDEGMHALDKYLAVKSVVTPLRASPW 100
P+GG K SGFG++ G +D YL++K V +PW
Sbjct: 366 PWGGNKRSGFGRELGEGGIDNYLSIKQVTEYTSDAPW 256
Score = 28.1 bits (55), Expect(3) = 9e-026
Identities = 9/19 (47%), Positives = 14/19 (73%)
Frame = -1 / -1
Query: 549 VLSYIGHGKREGATLLTGG 493
+ ++ + K EGAT+LTGG
Sbjct: 705 IKKFVANAKTEGATILTGG 649
>gb|BG299265.1|BG299265 HVSMEa0019A19f Hordeum vulgare seedling shoot EST library
HVcDNA0001 (Cold stress) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEa0019A19f, mRNA sequence
Length = 648
Score = 80.8 bits (170), Expect(3) = 4e-025
Identities = 30/59 (50%), Positives = 42/59 (71%)
Frame = -1 / +1
Query: 471 KGYYIEPTVFTNVKEDMIIAKEEIFGPVMCLMKFKPVEEAIARANDTRYGLGAGVVTRD 295
KG++IEPT+ T++ M I +EE+FGPV+C+ +F EEAI ANDT YGL V++ D
Sbjct: 157 KGFFIEPTIITDINTSMEIWREEVFGPVLCVKEFSTEEEAIKLANDTHYGLAGAVISGD 333
Score = 37.3 bits (75), Expect(3) = 4e-025
Identities = 12/23 (52%), Positives = 19/23 (82%)
Frame = -1 / +1
Query: 561 QYERVLSYIGHGKREGATLLTGG 493
QYE++ +++ + K EGAT+LTGG
Sbjct: 67 QYEKIKTFVANAKTEGATILTGG 135
Score = 33.6 bits (67), Expect(3) = 4e-025
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = -1 / +1
Query: 210 PFGGRKMSGFGKDEGMHALDKYLAVKSV 127
P+GG K GF ++ G +D YL++K V
Sbjct: 418 PWGGNKRIGFRRELGEGGIDNYLSIKQV 501
>gb|BM371235.1|BM371235 EBro04_SQ003_O18_R root, 3 week, salt-stressed, cv Optic, EBro04
Hordeum vulgare subsp. vulgare cDNA clone
EBro04_SQ003_O18 5', mRNA sequence
Length = 423
Score = 113 bits (242), Expect = 7e-025
Identities = 55/88 (62%), Positives = 59/88 (67%)
Frame = +2 / -3
Query: 101 QGEARSGVTTDLTARYLSSACMPSSLPKPLILRPPKGQSLPMAK*QFTHTTPARTDLTTR 280
QGE+ + V T LT YLS A MP S PKPLIL PPKG S AK*QFTHT PARTDL T
Sbjct: 268 QGESGTAVITLLTCMYLSMAIMPWSRPKPLILYPPKGASGSKAK*QFTHTVPARTDLDTL 89
Query: 281 FATSRSRVTTPAPSPYRVSFALAIASST 364
A S+ V PA SPY V A +IASST
Sbjct: 88 LAMSKFLVMIPAASPYLVQLAFSIASST 5
Score = 112 bits (240), Expect = 1e-024
Identities = 45/88 (51%), Positives = 59/88 (67%)
Frame = -1 / +3
Query: 363 VEEAIARANDTRYGLGAGVVTRDLDXXXXXXXXXXXXXXXXNCYFAMGSDCPFGGRKMSG 184
V+EAI +AN T+YGL AG++T++LD NCYFA + PFGG KMSG
Sbjct: 6 VDEAIEKANCTKYGLAAGIITKNLDIANKVSRSVRAGTVWVNCYFAFDPEAPFGGYKMSG 185
Query: 183 FGKDEGMHALDKYLAVKSVVTPLRASPW 100
FG+D+GM A+DKY+ VKSV+T + SPW
Sbjct: 186 FGRDQGMMAIDKYMQVKSVITAVPDSPW 269
>gb|AL501734.1|AL501734 AL501734 Hordeum vulgare Barke roots Hordeum vulgare subsp. vulgare
cDNA clone HW05C24u 3', mRNA sequence
Length = 556
Score = 100 bits (212), Expect(2) = 2e-023
Identities = 49/82 (59%), Positives = 52/82 (63%)
Frame = +2 / +3
Query: 101 QGEARSGVTTDLTARYLSSACMPSSLPKPLILRPPKGQSLPMAK*QFTHTTPARTDLTTR 280
QGE+ + V T LT YLS A MP S PKPLIL PPKG S AK*QFTHT PARTDL T
Sbjct: 243 QGESGTAVITLLTCMYLSMAIMPWSRPKPLILYPPKGASGSKAK*QFTHTVPARTDLDTL 422
Query: 281 FATSRSRVTTPAPSPYRVSFAL 346
A S+ PA SPY V L
Sbjct: 423 LAMSKFLGMIPAASPYLVQVGL 488
Score = 98.2 bits (208), Expect(2) = 1e-024
Identities = 39/82 (47%), Positives = 51/82 (62%)
Frame = -1 / -1
Query: 345 RANDTRYGLGAGVVTRDLDXXXXXXXXXXXXXXXXNCYFAMGSDCPFGGRKMSGFGKDEG 166
R T+YGL AG++ ++LD NCYFA + PFGG KMSGFG+D+G
Sbjct: 487 RPTCTKYGLAAGIIPKNLDIANKVSRSVRAGTVWVNCYFAFDPEAPFGGYKMSGFGRDQG 308
Query: 165 MHALDKYLAVKSVVTPLRASPW 100
M A+DKY+ VKSV+T + SPW
Sbjct: 307 MMAIDKYMQVKSVITAVPDSPW 242
Score = 34.5 bits (69), Expect(2) = 1e-024
Identities = 14/19 (73%), Positives = 16/19 (84%)
Frame = -1 / -3
Query: 393 PVMCLMKFKPVEEAIARAN 337
PVM LMKFK V+EAI +AN
Sbjct: 536 PVMSLMKFKTVDEAIEKAN 480
Score = 28.6 bits (56), Expect(2) = 2e-023
Identities = 12/18 (66%), Positives = 15/18 (83%)
Frame = +2 / +1
Query: 341 ALAIASSTGLNFIRHMTG 394
A +IASST LNF+R +TG
Sbjct: 484 AFSIASSTVLNFMRDITG 537
>gb|BJ545493.1|BJ545493 BJ545493 K. Sato unpublished cDNA library, cv. Akashinriki
vegetative stage leaves Hordeum vulgare subsp. vulgare
cDNA clone baak17a20 3', mRNA sequence
Length = 586
Score = 110 bits (235), Expect = 7e-024
Identities = 49/110 (44%), Positives = 65/110 (59%)
Frame = -1 / -3
Query: 423 MIIAKEEIFGPVMCLMKFKPVEEAIARANDTRYGLGAGVVTRDLDXXXXXXXXXXXXXXX 244
M IA+EEIFGPV + KF + E I RAN ++YGL AGV T +LD
Sbjct: 584 MKIAQEEIFGPVQSIFKFNDLNEVIKRANASQYGLAAGVFTNNLDTANTLTRALRAGTIW 405
Query: 243 XNCYFAMGSDCPFGGRKMSGFGKDEGMHALDKYLAVKSVVTPLRASPWI* 94
NC+ + PFGG KMSG G+++G+ +L YL VK+VVT L+ W+*
Sbjct: 404 VNCFDIFDAAIPFGGYKMSGIGREKGIDSLKNYLQVKAVVTALKNPAWL* 255
Database: Hordeum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:16 PM
Number of letters in database: 175,134,539
Number of sequences in database: 312,970
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 226,507,663
Number of Sequences: 312970
Number of extensions: 3410083
Number of successful extensions: 73855
Number of sequences better than 1.0e-020: 73
length of database: 58,378,179
effective HSP length: 51
effective length of database: 42,416,709
effective search space used: 6320089641
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)