TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2521865.2.1
(638 letters)
Database: Hordeum_nucl_with_EST.fasta
312,970 sequences; 175,134,539 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|AV925892.1|AV925892 AV925892 K. Sato unpublished cDNA li... 275 2e-073
gb|AV928662.1|AV928662 AV928662 K. Sato unpublished cDNA li... 275 2e-073
gb|AV935887.1|AV935887 AV935887 K. Sato unpublished cDNA li... 275 2e-073
gb|CV059284.1|CV059284 BNEL46d8 Barley EST endosperm librar... 259 8e-069
gb|BU976140.1|BU976140 HA03D09u HA Hordeum vulgare subsp. v... 245 1e-064
gb|CA031834.1|CA031834 HX11E06r HX Hordeum vulgare subsp. v... 245 2e-064
gb|CV055547.1|CV055547 BNEL120h12 Barley EST endosperm libr... 224 4e-058
gb|CV062825.1|CV062825 BNEL83e1 Barley EST endosperm librar... 222 2e-057
gb|BQ657408.1|BQ657408 HA08H22u HA Hordeum vulgare subsp. v... 160 5e-039
gb|CV062563.1|CV062563 BNEL80d8 Barley EST endosperm librar... 139 1e-038
gb|BU972274.1|BU972274 HB21C22r BC Hordeum vulgare subsp. v... 157 4e-038
gb|CV059060.1|CV059060 BNEL43h6 Barley EST endosperm librar... 153 8e-037
gb|BI777049.2|BI777049 EBpi03_SQ001_M01_R pistil, 4 DPA, no... 90 2e-035
gb|BU985075.1|BU985075 HF06A23r HF Hordeum vulgare subsp. v... 134 5e-031
gb|CV056920.1|CV056920 BNEL22a9 Barley EST endosperm librar... 134 5e-031
gb|BQ760241.1|BQ760241 EBpi07_SQ003_K16_R pistil, 12 DPA, n... 79 2e-029
gb|CV055258.1|CV055258 BNEL118f1 Barley EST endosperm libra... 118 3e-026
>gb|AV925892.1|AV925892 AV925892 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp.
vulgare cDNA clone basdd19 5', mRNA sequence
Length = 612
Score = 275 bits (595), Expect = 2e-073
Identities = 115/119 (96%), Positives = 115/119 (96%)
Frame = +2 / +1
Query: 2 LATGAHVVGNVLVHESAKIGEGCLIGPDVAIGPGCVVEDGVRLSRCTVMRGVRIKKHACI 181
LA G H VGNVLVHESAKIGEGCLIGPDVAIGPGCVVEDGVRLSRCTVMRGVRIKKHACI
Sbjct: 223 LAVGEHFVGNVLVHESAKIGEGCLIGPDVAIGPGCVVEDGVRLSRCTVMRGVRIKKHACI 402
Query: 182 SNSIIGWHSTVGQWARIENMTILGEDVHVCDEVYSNGGVVLPHKEIKSSILKPEIVM*A 358
SNSIIGWHSTVGQWARIENMTILGEDVHV DEVYSNGGVVLPHKEIKSSILKPEIVM*A
Sbjct: 403 SNSIIGWHSTVGQWARIENMTILGEDVHVGDEVYSNGGVVLPHKEIKSSILKPEIVM*A 579
Score = 174 bits (374), Expect(2) = 2e-050
Identities = 70/83 (84%), Positives = 76/83 (91%)
Frame = -3 / -2
Query: 249 RIVIFSIRAH*PTVECQPIMLFEMQACFLIRTPRMTVQRESLTPSSTTHPGPMATSGPIR 70
RIVIFS+RAH PTVECQP+MLFEM ACFL+RTPR+TV RESLTPSSTTHPGP+ATSGPIR
Sbjct: 470 RIVIFSMRAHCPTVECQPMMLFEMHACFLMRTPRITVHRESLTPSSTTHPGPIATSGPIR 291
Query: 69 QPSPILALSCTSTLPTTCAPVAS 1
QPSPILALSCT T PT C+P AS
Sbjct: 290 QPSPILALSCTRTFPTKCSPTAS 222
Score = 166 bits (358), Expect = 8e-041
Identities = 69/116 (59%), Positives = 87/116 (75%)
Frame = -2 / -1
Query: 358 SSHDDLRLQNA*LDLFMWENNTAIAVHLITHMNILPQDSHILYPCPLTNS*VPADNAV*D 179
SSHDDLRL++A*LDL + +NNTA+AV L+T+M I QDSHILY CPL + +PAD+AV*D
Sbjct: 579 SSHDDLRLKDA*LDLLVRQNNTAVAVDLVTNMYIFSQDSHILYACPLPDRRMPADDAV*D 400
Query: 178 ASMLLDTHAAHDSAAGKPHAVLHNTPRSNGDIRTNQTTFSNLGALMHQHIANNMCS 11
A MLL+ + H A+G+PH +LHN RSN +IR NQT NLG L+HQ + N M S
Sbjct: 399 ARMLLNAYTTHHRASGEPHTILHNASRSNSNIRANQTALPNLGTLVHQDVPNKMFS 232
Score = 125 bits (267), Expect = 3e-028
Identities = 61/106 (57%), Positives = 68/106 (64%)
Frame = +3 / +2
Query: 12 EHMLLAMCWCMRAPRLEKVV*LVLMSPLDLGVLWRTA*GFPAALSCAACVSRSMLASQTA 191
E++LL WC R PRL + V*L LM LDL LWR *G P A C RSM ASQTA
Sbjct: 233 ENILLGTSWCTRVPRLGRAV*LALMLLLDLDALWRMV*GSPDAR*CVVYALRSMRASQTA 412
Query: 192 LSAGTQLLVNGHG*RI*LSWGRMFMCVMRCTAMAVLFSHIKRSSQA 329
SAG + NGH *RI*LSW +M+M V R TA AVLF +RSSQA
Sbjct: 413 SSAGIRRSGNGHA*RI*LSWEKMYMLVTRSTATAVLFCRTRRSSQA 550
Score = 117 bits (250), Expect(2) = 8e-034
Identities = 46/78 (58%), Positives = 55/78 (70%)
Frame = +1 / +3
Query: 16 TCCWQCAGA*ERQDWRRLSDWS*CRHWTWVCCGGRREAFPLHCHARRAYQEACLHLKQHY 195
T CW+ GA E QDW LSDW *C +WTW+ CGG EA P+H A + EAC+HLKQH+
Sbjct: 237 TFCWERPGARECQDWGGLSDWP*CCYWTWMRCGGWCEALPMHGDAWCTH*EACVHLKQHH 416
Query: 196 RLALNCWSMGTDREYDYP 249
RLA + +MGT REYDYP
Sbjct: 417 RLAFDGRAMGTHREYDYP 470
Score = 107 bits (228), Expect(2) = 2e-026
Identities = 48/80 (60%), Positives = 55/80 (68%)
Frame = -1 / -3
Query: 248 G*SYSLSVPIDQQLSASR*CCLRCKHAS*YARRA*QCSGKASRRPPQHTQVQWRHQDQSD 69
G*SYSL VPI + +ASR*CCLRC HAS* A C G+AS PPQ QVQ +HQ QSD
Sbjct: 469 G*SYSLCVPIARPSNASR*CCLRCTHAS*CVHHASPCIGRASHHPPQRIQVQ*QHQGQSD 290
Query: 68 NLLQSWRSHAPAHCQQHVLQ 9
+ QSW S AP QQ+VL+
Sbjct: 289 SPPQSWHSRAPGRSQQNVLR 230
Score = 46.0 bits (94), Expect(2) = 8e-034
Identities = 20/28 (71%), Positives = 21/28 (75%)
Frame = +1 / +3
Query: 283 QQWRCCSPT*RDQVKHSEA*DRHVSSPV 366
QQ RCCS DQVKH A*DRHVSSP+
Sbjct: 504 QQRRCCSAAQGDQVKHP*A*DRHVSSPL 587
Score = 45.1 bits (92), Expect(2) = 2e-050
Identities = 18/19 (94%), Positives = 18/19 (94%)
Frame = -3 / -2
Query: 357 AHMTISGFRMLDLISLCGR 301
AHMTISG RMLDLISLCGR
Sbjct: 578 AHMTISGLRMLDLISLCGR 522
Score = 31.3 bits (62), Expect(2) = 2e-026
Identities = 16/23 (69%), Positives = 17/23 (73%)
Frame = -1 / -3
Query: 365 TGELT*RSQASECLT*SLYVGEQ 297
+GELT*RSQA CLT*S EQ
Sbjct: 586 SGELT*RSQA*GCLT*SPCAAEQ 518
>gb|AV928662.1|AV928662 AV928662 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp.
vulgare cDNA clone basd15d19 3', mRNA sequence
Length = 673
Score = 275 bits (595), Expect = 2e-073
Identities = 115/119 (96%), Positives = 115/119 (96%)
Frame = +2 / -1
Query: 2 LATGAHVVGNVLVHESAKIGEGCLIGPDVAIGPGCVVEDGVRLSRCTVMRGVRIKKHACI 181
LA G H VGNVLVHESAKIGEGCLIGPDVAIGPGCVVEDGVRLSRCTVMRGVRIKKHACI
Sbjct: 460 LAVGEHFVGNVLVHESAKIGEGCLIGPDVAIGPGCVVEDGVRLSRCTVMRGVRIKKHACI 281
Query: 182 SNSIIGWHSTVGQWARIENMTILGEDVHVCDEVYSNGGVVLPHKEIKSSILKPEIVM*A 358
SNSIIGWHSTVGQWARIENMTILGEDVHV DEVYSNGGVVLPHKEIKSSILKPEIVM*A
Sbjct: 280 SNSIIGWHSTVGQWARIENMTILGEDVHVGDEVYSNGGVVLPHKEIKSSILKPEIVM*A 104
Score = 174 bits (374), Expect(2) = 2e-050
Identities = 70/83 (84%), Positives = 76/83 (91%)
Frame = -3 / +3
Query: 249 RIVIFSIRAH*PTVECQPIMLFEMQACFLIRTPRMTVQRESLTPSSTTHPGPMATSGPIR 70
RIVIFS+RAH PTVECQP+MLFEM ACFL+RTPR+TV RESLTPSSTTHPGP+ATSGPIR
Sbjct: 213 RIVIFSMRAHCPTVECQPMMLFEMHACFLMRTPRITVHRESLTPSSTTHPGPIATSGPIR 392
Query: 69 QPSPILALSCTSTLPTTCAPVAS 1
QPSPILALSCT T PT C+P AS
Sbjct: 393 QPSPILALSCTRTFPTKCSPTAS 461
Score = 166 bits (358), Expect = 8e-041
Identities = 69/116 (59%), Positives = 87/116 (75%)
Frame = -2 / +2
Query: 358 SSHDDLRLQNA*LDLFMWENNTAIAVHLITHMNILPQDSHILYPCPLTNS*VPADNAV*D 179
SSHDDLRL++A*LDL + +NNTA+AV L+T+M I QDSHILY CPL + +PAD+AV*D
Sbjct: 104 SSHDDLRLKDA*LDLLVRQNNTAVAVDLVTNMYIFSQDSHILYACPLPDRRMPADDAV*D 283
Query: 178 ASMLLDTHAAHDSAAGKPHAVLHNTPRSNGDIRTNQTTFSNLGALMHQHIANNMCS 11
A MLL+ + H A+G+PH +LHN RSN +IR NQT NLG L+HQ + N M S
Sbjct: 284 ARMLLNAYTTHHRASGEPHTILHNASRSNSNIRANQTALPNLGTLVHQDVPNKMFS 451
Score = 125 bits (267), Expect = 3e-028
Identities = 61/106 (57%), Positives = 68/106 (64%)
Frame = +3 / -2
Query: 12 EHMLLAMCWCMRAPRLEKVV*LVLMSPLDLGVLWRTA*GFPAALSCAACVSRSMLASQTA 191
E++LL WC R PRL + V*L LM LDL LWR *G P A C RSM ASQTA
Sbjct: 450 ENILLGTSWCTRVPRLGRAV*LALMLLLDLDALWRMV*GSPDAR*CVVYALRSMRASQTA 271
Query: 192 LSAGTQLLVNGHG*RI*LSWGRMFMCVMRCTAMAVLFSHIKRSSQA 329
SAG + NGH *RI*LSW +M+M V R TA AVLF +RSSQA
Sbjct: 270 SSAGIRRSGNGHA*RI*LSWEKMYMLVTRSTATAVLFCRTRRSSQA 133
Score = 117 bits (250), Expect(2) = 8e-034
Identities = 46/78 (58%), Positives = 55/78 (70%)
Frame = +1 / -3
Query: 16 TCCWQCAGA*ERQDWRRLSDWS*CRHWTWVCCGGRREAFPLHCHARRAYQEACLHLKQHY 195
T CW+ GA E QDW LSDW *C +WTW+ CGG EA P+H A + EAC+HLKQH+
Sbjct: 446 TFCWERPGARECQDWGGLSDWP*CCYWTWMRCGGWCEALPMHGDAWCTH*EACVHLKQHH 267
Query: 196 RLALNCWSMGTDREYDYP 249
RLA + +MGT REYDYP
Sbjct: 266 RLAFDGRAMGTHREYDYP 213
Score = 107 bits (228), Expect(2) = 2e-026
Identities = 48/80 (60%), Positives = 55/80 (68%)
Frame = -1 / +1
Query: 248 G*SYSLSVPIDQQLSASR*CCLRCKHAS*YARRA*QCSGKASRRPPQHTQVQWRHQDQSD 69
G*SYSL VPI + +ASR*CCLRC HAS* A C G+AS PPQ QVQ +HQ QSD
Sbjct: 214 G*SYSLCVPIARPSNASR*CCLRCTHAS*CVHHASPCIGRASHHPPQRIQVQ*QHQGQSD 393
Query: 68 NLLQSWRSHAPAHCQQHVLQ 9
+ QSW S AP QQ+VL+
Sbjct: 394 SPPQSWHSRAPGRSQQNVLR 453
Score = 46.0 bits (94), Expect(2) = 8e-034
Identities = 20/28 (71%), Positives = 21/28 (75%)
Frame = +1 / -3
Query: 283 QQWRCCSPT*RDQVKHSEA*DRHVSSPV 366
QQ RCCS DQVKH A*DRHVSSP+
Sbjct: 179 QQRRCCSAAQGDQVKHP*A*DRHVSSPL 96
Score = 45.1 bits (92), Expect(2) = 2e-050
Identities = 18/19 (94%), Positives = 18/19 (94%)
Frame = -3 / +3
Query: 357 AHMTISGFRMLDLISLCGR 301
AHMTISG RMLDLISLCGR
Sbjct: 105 AHMTISGLRMLDLISLCGR 161
Score = 31.3 bits (62), Expect(2) = 2e-026
Identities = 16/23 (69%), Positives = 17/23 (73%)
Frame = -1 / +1
Query: 365 TGELT*RSQASECLT*SLYVGEQ 297
+GELT*RSQA CLT*S EQ
Sbjct: 97 SGELT*RSQA*GCLT*SPCAAEQ 165
>gb|AV935887.1|AV935887 AV935887 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal6n22 3', mRNA sequence
Length = 651
Score = 275 bits (595), Expect = 2e-073
Identities = 115/119 (96%), Positives = 115/119 (96%)
Frame = +2 / -2
Query: 2 LATGAHVVGNVLVHESAKIGEGCLIGPDVAIGPGCVVEDGVRLSRCTVMRGVRIKKHACI 181
LA G H VGNVLVHESAKIGEGCLIGPDVAIGPGCVVEDGVRLSRCTVMRGVRIKKHACI
Sbjct: 428 LAVGEHFVGNVLVHESAKIGEGCLIGPDVAIGPGCVVEDGVRLSRCTVMRGVRIKKHACI 249
Query: 182 SNSIIGWHSTVGQWARIENMTILGEDVHVCDEVYSNGGVVLPHKEIKSSILKPEIVM*A 358
SNSIIGWHSTVGQWARIENMTILGEDVHV DEVYSNGGVVLPHKEIKSSILKPEIVM*A
Sbjct: 248 SNSIIGWHSTVGQWARIENMTILGEDVHVGDEVYSNGGVVLPHKEIKSSILKPEIVM*A 72
Score = 174 bits (374), Expect(2) = 2e-050
Identities = 70/83 (84%), Positives = 76/83 (91%)
Frame = -3 / +1
Query: 249 RIVIFSIRAH*PTVECQPIMLFEMQACFLIRTPRMTVQRESLTPSSTTHPGPMATSGPIR 70
RIVIFS+RAH PTVECQP+MLFEM ACFL+RTPR+TV RESLTPSSTTHPGP+ATSGPIR
Sbjct: 181 RIVIFSMRAHCPTVECQPMMLFEMHACFLMRTPRITVHRESLTPSSTTHPGPIATSGPIR 360
Query: 69 QPSPILALSCTSTLPTTCAPVAS 1
QPSPILALSCT T PT C+P AS
Sbjct: 361 QPSPILALSCTRTFPTKCSPTAS 429
Score = 166 bits (358), Expect = 8e-041
Identities = 69/116 (59%), Positives = 87/116 (75%)
Frame = -2 / +3
Query: 358 SSHDDLRLQNA*LDLFMWENNTAIAVHLITHMNILPQDSHILYPCPLTNS*VPADNAV*D 179
SSHDDLRL++A*LDL + +NNTA+AV L+T+M I QDSHILY CPL + +PAD+AV*D
Sbjct: 72 SSHDDLRLKDA*LDLLVRQNNTAVAVDLVTNMYIFSQDSHILYACPLPDRRMPADDAV*D 251
Query: 178 ASMLLDTHAAHDSAAGKPHAVLHNTPRSNGDIRTNQTTFSNLGALMHQHIANNMCS 11
A MLL+ + H A+G+PH +LHN RSN +IR NQT NLG L+HQ + N M S
Sbjct: 252 ARMLLNAYTTHHRASGEPHTILHNASRSNSNIRANQTALPNLGTLVHQDVPNKMFS 419
Score = 125 bits (267), Expect = 3e-028
Identities = 61/106 (57%), Positives = 68/106 (64%)
Frame = +3 / -3
Query: 12 EHMLLAMCWCMRAPRLEKVV*LVLMSPLDLGVLWRTA*GFPAALSCAACVSRSMLASQTA 191
E++LL WC R PRL + V*L LM LDL LWR *G P A C RSM ASQTA
Sbjct: 418 ENILLGTSWCTRVPRLGRAV*LALMLLLDLDALWRMV*GSPDAR*CVVYALRSMRASQTA 239
Query: 192 LSAGTQLLVNGHG*RI*LSWGRMFMCVMRCTAMAVLFSHIKRSSQA 329
SAG + NGH *RI*LSW +M+M V R TA AVLF +RSSQA
Sbjct: 238 SSAGIRRSGNGHA*RI*LSWEKMYMLVTRSTATAVLFCRTRRSSQA 101
Score = 117 bits (250), Expect(2) = 8e-034
Identities = 46/78 (58%), Positives = 55/78 (70%)
Frame = +1 / -1
Query: 16 TCCWQCAGA*ERQDWRRLSDWS*CRHWTWVCCGGRREAFPLHCHARRAYQEACLHLKQHY 195
T CW+ GA E QDW LSDW *C +WTW+ CGG EA P+H A + EAC+HLKQH+
Sbjct: 414 TFCWERPGARECQDWGGLSDWP*CCYWTWMRCGGWCEALPMHGDAWCTH*EACVHLKQHH 235
Query: 196 RLALNCWSMGTDREYDYP 249
RLA + +MGT REYDYP
Sbjct: 234 RLAFDGRAMGTHREYDYP 181
Score = 107 bits (228), Expect(2) = 2e-026
Identities = 48/80 (60%), Positives = 55/80 (68%)
Frame = -1 / +2
Query: 248 G*SYSLSVPIDQQLSASR*CCLRCKHAS*YARRA*QCSGKASRRPPQHTQVQWRHQDQSD 69
G*SYSL VPI + +ASR*CCLRC HAS* A C G+AS PPQ QVQ +HQ QSD
Sbjct: 182 G*SYSLCVPIARPSNASR*CCLRCTHAS*CVHHASPCIGRASHHPPQRIQVQ*QHQGQSD 361
Query: 68 NLLQSWRSHAPAHCQQHVLQ 9
+ QSW S AP QQ+VL+
Sbjct: 362 SPPQSWHSRAPGRSQQNVLR 421
Score = 46.0 bits (94), Expect(2) = 8e-034
Identities = 20/28 (71%), Positives = 21/28 (75%)
Frame = +1 / -1
Query: 283 QQWRCCSPT*RDQVKHSEA*DRHVSSPV 366
QQ RCCS DQVKH A*DRHVSSP+
Sbjct: 147 QQRRCCSAAQGDQVKHP*A*DRHVSSPL 64
Score = 45.1 bits (92), Expect(2) = 2e-050
Identities = 18/19 (94%), Positives = 18/19 (94%)
Frame = -3 / +1
Query: 357 AHMTISGFRMLDLISLCGR 301
AHMTISG RMLDLISLCGR
Sbjct: 73 AHMTISGLRMLDLISLCGR 129
Score = 31.3 bits (62), Expect(2) = 2e-026
Identities = 16/23 (69%), Positives = 17/23 (73%)
Frame = -1 / +2
Query: 365 TGELT*RSQASECLT*SLYVGEQ 297
+GELT*RSQA CLT*S EQ
Sbjct: 65 SGELT*RSQA*GCLT*SPCAAEQ 133
>gb|CV059284.1|CV059284 BNEL46d8 Barley EST endosperm library Hordeum vulgare subsp.
vulgare cDNA clone BNEL46d8 5' similar to COG1208, GCD1,
Nucleoside-diphosphate-sugar pyrophosphorylase involved
in lipopolysaccharide biosynthesis/translation
initiation factor 2B, gamma/epsilon subunits, mRNA
sequence
Length = 637
Score = 259 bits (561), Expect = 8e-069
Identities = 104/118 (88%), Positives = 112/118 (94%)
Frame = +2 / +2
Query: 2 LATGAHVVGNVLVHESAKIGEGCLIGPDVAIGPGCVVEDGVRLSRCTVMRGVRIKKHACI 181
LA+GAHV+ NVLVHE+A IGEGCLIGPDVA+GP CVVE GVRLSRCTVMRG R+KKHACI
Sbjct: 272 LASGAHVLXNVLVHETATIGEGCLIGPDVAVGPRCVVEAGVRLSRCTVMRGARVKKHACI 451
Query: 182 SNSIIGWHSTVGQWARIENMTILGEDVHVCDEVYSNGGVVLPHKEIKSSILKPEIVM* 355
S SI+GWHSTVG+WAR+ENMTILGEDVHVCDEVYSNGGVVLPHKEIKSSILKPEIVM*
Sbjct: 452 SGSIVGWHSTVGKWARVENMTILGEDVHVCDEVYSNGGVVLPHKEIKSSILKPEIVM* 625
Score = 162 bits (349), Expect = 1e-039
Identities = 73/118 (61%), Positives = 80/118 (67%)
Frame = -3 / -2
Query: 354 HMTISGFRMLDLISLCGRXXXXXXXXXXXXXXXXPRIVIFSIRAH*PTVECQPIMLFEMQ 175
HMTISG RMLDLISLCG PR+V+FS RAH PTVEC P ML EM
Sbjct: 624 HMTISGLRMLDLISLCGSTTPPLLYTSSQTCTSSPRMVMFSTRAHLPTVECHPTMLPEMH 445
Query: 174 ACFLIRTPRMTVQRESLTPSSTTHPGPMATSGPIRQPSPILALSCTSTLPTTCAPVAS 1
ACF R PR+TV +S TP+STT GP ATSGPIR PSPI+A+S TSTL TCAP AS
Sbjct: 444 ACFFTRAPRITVHLDSRTPASTTQRGPTATSGPIRHPSPIVAVSWTSTLXRTCAPEAS 271
Score = 105 bits (225), Expect = 2e-022
Identities = 44/113 (38%), Positives = 71/113 (62%)
Frame = -2 / -1
Query: 355 SHDDLRLQNA*LDLFMWENNTAIAVHLITHMNILPQDSHILYPCPLTNS*VPADNAV*DA 176
SHDDL L++A LDL + E++ A+AVHL+ +++L +D H+L+ PL + VP +A DA
Sbjct: 625 SHDDLGLEDAGLDLLVREHDAAVAVHLVADVHVLAEDGHVLHARPLAHRRVPPHDAAGDA 446
Query: 175 SMLLDTHAAHDSAAGKPHAVLHNTPRSNGDIRTNQTTFSNLGALMHQHIANNM 17
+LL A H A +PH LH+ ++G +R +Q F + L+ QH+A ++
Sbjct: 445 RVLLHARATHHGAPRQPHXGLHHATGADGHVRPDQAPFPDRRRLVDQHVAQDV 287
>gb|BU976140.1|BU976140 HA03D09u HA Hordeum vulgare subsp. vulgare cDNA clone HA03D09
3-PRIME, mRNA sequence
Length = 485
Score = 245 bits (530), Expect = 1e-064
Identities = 102/103 (99%), Positives = 102/103 (99%)
Frame = +2 / -1
Query: 50 AKIGEGCLIGPDVAIGPGCVVEDGVRLSRCTVMRGVRIKKHACISNSIIGWHSTVGQWAR 229
AKIGEGCLIGPDVAIGPGCVVEDGVRLSRCTVMRGVRIKKHACISNSIIGWHSTVGQWAR
Sbjct: 485 AKIGEGCLIGPDVAIGPGCVVEDGVRLSRCTVMRGVRIKKHACISNSIIGWHSTVGQWAR 306
Query: 230 IENMTILGEDVHVCDEVYSNGGVVLPHKEIKSSILKPEIVM*A 358
IENMTILGEDVHV DEVYSNGGVVLPHKEIKSSILKPEIVM*A
Sbjct: 305 IENMTILGEDVHVGDEVYSNGGVVLPHKEIKSSILKPEIVM*A 177
Score = 152 bits (326), Expect = 2e-036
Identities = 63/103 (61%), Positives = 79/103 (76%)
Frame = -2 / +3
Query: 358 SSHDDLRLQNA*LDLFMWENNTAIAVHLITHMNILPQDSHILYPCPLTNS*VPADNAV*D 179
SSHDDLRL++A*LDL + +NNTA+AV L+T+M I QDSHILY CPL + +PAD+AV*D
Sbjct: 177 SSHDDLRLKDA*LDLLVRQNNTAVAVDLVTNMYIFSQDSHILYACPLPDRRMPADDAV*D 356
Query: 178 ASMLLDTHAAHDSAAGKPHAVLHNTPRSNGDIRTNQTTFSNLG 50
A MLL+ + H A+G+PH +LHN RSN +IR NQT NLG
Sbjct: 357 ARMLLNAYTTHHRASGEPHTILHNASRSNSNIRANQTALPNLG 485
Score = 144 bits (308), Expect(2) = 2e-041
Identities = 58/66 (87%), Positives = 63/66 (95%)
Frame = -3 / +1
Query: 249 RIVIFSIRAH*PTVECQPIMLFEMQACFLIRTPRMTVQRESLTPSSTTHPGPMATSGPIR 70
RIVIFS+RAH PTVECQP+MLFEM ACFL+RTPR+TV RESLTPSSTTHPGP+ATSGPIR
Sbjct: 286 RIVIFSMRAHCPTVECQPMMLFEMHACFLMRTPRITVHRESLTPSSTTHPGPIATSGPIR 465
Query: 69 QPSPIL 52
QPSPIL
Sbjct: 466 QPSPIL 483
Score = 108 bits (230), Expect = 3e-023
Identities = 55/93 (59%), Positives = 60/93 (64%)
Frame = +3 / -2
Query: 51 PRLEKVV*LVLMSPLDLGVLWRTA*GFPAALSCAACVSRSMLASQTALSAGTQLLVNGHG 230
PRL + V*L LM LDL LWR *G P A C RSM ASQTA SAG + NGH
Sbjct: 484 PRLGRAV*LALMLLLDLDALWRMV*GSPDAR*CVVYALRSMRASQTASSAGIRRSGNGHA 305
Query: 231 *RI*LSWGRMFMCVMRCTAMAVLFSHIKRSSQA 329
*RI*LSW +M+M V R TA AVLF +RSSQA
Sbjct: 304 *RI*LSWEKMYMLVTRSTATAVLFCRTRRSSQA 206
Score = 104 bits (221), Expect(2) = 7e-030
Identities = 40/66 (60%), Positives = 48/66 (72%)
Frame = +1 / -3
Query: 52 QDWRRLSDWS*CRHWTWVCCGGRREAFPLHCHARRAYQEACLHLKQHYRLALNCWSMGTD 231
QDW LSDW *C +WTW+ CGG EA P+H A + EAC+HLKQH+RLA + +MGT
Sbjct: 483 QDWGGLSDWP*CCYWTWMRCGGWCEALPMHGDAWCTH*EACVHLKQHHRLAFDGRAMGTH 304
Query: 232 REYDYP 249
REYDYP
Sbjct: 303 REYDYP 286
Score = 91.8 bits (194), Expect(2) = 8e-022
Identities = 41/66 (62%), Positives = 46/66 (69%)
Frame = -1 / +2
Query: 248 G*SYSLSVPIDQQLSASR*CCLRCKHAS*YARRA*QCSGKASRRPPQHTQVQWRHQDQSD 69
G*SYSL VPI + +ASR*CCLRC HAS* A C G+AS PPQ QVQ +HQ QSD
Sbjct: 287 G*SYSLCVPIARPSNASR*CCLRCTHAS*CVHHASPCIGRASHHPPQRIQVQ*QHQGQSD 466
Query: 68 NLLQSW 51
+ QSW
Sbjct: 467 SPPQSW 484
Score = 46.0 bits (94), Expect(2) = 7e-030
Identities = 20/28 (71%), Positives = 21/28 (75%)
Frame = +1 / -3
Query: 283 QQWRCCSPT*RDQVKHSEA*DRHVSSPV 366
QQ RCCS DQVKH A*DRHVSSP+
Sbjct: 252 QQRRCCSAAQGDQVKHP*A*DRHVSSPL 169
Score = 45.1 bits (92), Expect(2) = 2e-041
Identities = 18/19 (94%), Positives = 18/19 (94%)
Frame = -3 / +1
Query: 357 AHMTISGFRMLDLISLCGR 301
AHMTISG RMLDLISLCGR
Sbjct: 178 AHMTISGLRMLDLISLCGR 234
Score = 31.3 bits (62), Expect(2) = 8e-022
Identities = 16/23 (69%), Positives = 17/23 (73%)
Frame = -1 / +2
Query: 365 TGELT*RSQASECLT*SLYVGEQ 297
+GELT*RSQA CLT*S EQ
Sbjct: 170 SGELT*RSQA*GCLT*SPCAAEQ 238
>gb|CA031834.1|CA031834 HX11E06r HX Hordeum vulgare subsp. vulgare cDNA clone HX11E06
5-PRIME, mRNA sequence
Length = 620
Score = 245 bits (529), Expect = 2e-064
Identities = 95/107 (88%), Positives = 103/107 (96%)
Frame = +2 / +3
Query: 2 LATGAHVVGNVLVHESAKIGEGCLIGPDVAIGPGCVVEDGVRLSRCTVMRGVRIKKHACI 181
LA+GAHV+GNVLVHE+A IGEGCLIGPDVA+GPGCVVE GVRLSRCTVMRG R+KKHACI
Sbjct: 300 LASGAHVLGNVLVHETATIGEGCLIGPDVAVGPGCVVEAGVRLSRCTVMRGARVKKHACI 479
Query: 182 SNSIIGWHSTVGQWARIENMTILGEDVHVCDEVYSNGGVVLPHKEIK 322
S SI+GWHSTVG+WAR+ENMTILGEDVHVCDEVYSNGGVVLPHKEIK
Sbjct: 480 SGSIVGWHSTVGKWARVENMTILGEDVHVCDEVYSNGGVVLPHKEIK 620
Score = 150 bits (323), Expect = 5e-036
Identities = 66/107 (61%), Positives = 73/107 (68%)
Frame = -3 / -2
Query: 321 LISLCGRXXXXXXXXXXXXXXXXPRIVIFSIRAH*PTVECQPIMLFEMQACFLIRTPRMT 142
LISLCG PR+V+FS RAH PTVEC P ML EM ACF R PR+T
Sbjct: 619 LISLCGSTTPPLLYTSSQTCTSSPRMVMFSTRAHLPTVECHPTMLPEMHACFFTRAPRIT 440
Query: 141 VQRESLTPSSTTHPGPMATSGPIRQPSPILALSCTSTLPTTCAPVAS 1
V +S TP+STTHPGP ATSGPIR PSPI+A+S TSTLP TCAP AS
Sbjct: 439 VHLDSRTPASTTHPGPTATSGPIRHPSPIVAVSWTSTLPRTCAPEAS 299
>gb|CV055547.1|CV055547 BNEL120h12 Barley EST endosperm library Hordeum vulgare subsp.
vulgare cDNA clone BNEL120h12 5' similar to GDP-mannose
pyrophosphorylase, mRNA sequence
Length = 730
Score = 224 bits (483), Expect = 4e-058
Identities = 88/99 (88%), Positives = 94/99 (94%)
Frame = +2 / -3
Query: 59 GEGCLIGPDVAIGPGCVVEDGVRLSRCTVMRGVRIKKHACISNSIIGWHSTVGQWARIEN 238
G GCLIGP VA+GPGCVV+ GVRLSRCTVMRG R+KKHACIS SI+GWHSTVG+WAR+EN
Sbjct: 605 GXGCLIGPXVAVGPGCVVKPGVRLSRCTVMRGARVKKHACISGSIVGWHSTVGKWARVEN 426
Query: 239 MTILGEDVHVCDEVYSNGGVVLPHKEIKSSILKPEIVM* 355
MTILGEDVHVCDEVYSNGGVVLPHKEIKSSILKPEIVM*
Sbjct: 425 MTILGEDVHVCDEVYSNGGVVLPHKEIKSSILKPEIVM* 309
Score = 134 bits (288), Expect = 3e-031
Identities = 58/99 (58%), Positives = 62/99 (62%)
Frame = -3 / +1
Query: 354 HMTISGFRMLDLISLCGRXXXXXXXXXXXXXXXXPRIVIFSIRAH*PTVECQPIMLFEMQ 175
HMTISG RMLDLISLCG PR+V+FS RAH PTVEC P ML EM
Sbjct: 310 HMTISGLRMLDLISLCGSTTPPLLYTSSQTCTSSPRMVMFSTRAHLPTVECHPTMLPEMH 489
Query: 174 ACFLIRTPRMTVQRESLTPSSTTHPGPMATSGPIRQPSP 58
ACF R PR+TV + TP TTHPGP AT GPIR P P
Sbjct: 490 ACFFTRAPRITVHLDRRTPGFTTHPGPTATXGPIRHPXP 606
>gb|CV062825.1|CV062825 BNEL83e1 Barley EST endosperm library Hordeum vulgare subsp.
vulgare cDNA clone BNEL83e1 5' similar to GDP-mannose
pyrophosphorylase, mRNA sequence
Length = 595
Score = 222 bits (479), Expect = 2e-057
Identities = 88/98 (89%), Positives = 93/98 (94%)
Frame = +2 / -3
Query: 62 EGCLIGPDVAIGPGCVVEDGVRLSRCTVMRGVRIKKHACISNSIIGWHSTVGQWARIENM 241
EGCLIGPDVA+G GCVV GVRLSRCTVMRG R+KKHACIS SI+GWHSTVG+WAR+ENM
Sbjct: 593 EGCLIGPDVAVGTGCVVXAGVRLSRCTVMRGARVKKHACISGSIVGWHSTVGKWARVENM 414
Query: 242 TILGEDVHVCDEVYSNGGVVLPHKEIKSSILKPEIVM* 355
TILGEDVHVCDEVYSNGGVVLPHKEIKSSILKPEIVM*
Sbjct: 413 TILGEDVHVCDEVYSNGGVVLPHKEIKSSILKPEIVM* 300
Score = 134 bits (288), Expect = 3e-031
Identities = 59/98 (60%), Positives = 64/98 (65%)
Frame = -3 / +1
Query: 354 HMTISGFRMLDLISLCGRXXXXXXXXXXXXXXXXPRIVIFSIRAH*PTVECQPIMLFEMQ 175
HMTISG RMLDLISLCG PR+V+FS RAH PTVEC P ML EM
Sbjct: 301 HMTISGLRMLDLISLCGSTTPPLLYTSSQTCTSSPRMVMFSTRAHLPTVECHPTMLPEMH 480
Query: 174 ACFLIRTPRMTVQRESLTPSSTTHPGPMATSGPIRQPS 61
ACF R PR+TV +S TP+ TTHP P ATSGPIR PS
Sbjct: 481 ACFFTRAPRITVHLDSRTPAXTTHPVPTATSGPIRHPS 594
>gb|BQ657408.1|BQ657408 HA08H22u HA Hordeum vulgare subsp. vulgare cDNA clone HA08H22
3-PRIME, mRNA sequence
Length = 497
Score = 160 bits (345), Expect = 5e-039
Identities = 63/69 (91%), Positives = 67/69 (97%)
Frame = +2 / -2
Query: 149 RGVRIKKHACISNSIIGWHSTVGQWARIENMTILGEDVHVCDEVYSNGGVVLPHKEIKSS 328
RG R+KKHACIS SI+GWHSTVG+WAR+ENMTILGEDVHVCDEVYSNGGVVLPHKEIKSS
Sbjct: 496 RGARVKKHACISGSIVGWHSTVGKWARVENMTILGEDVHVCDEVYSNGGVVLPHKEIKSS 317
Query: 329 ILKPEIVM* 355
ILKPEIVM*
Sbjct: 316 ILKPEIVM* 290
>gb|CV062563.1|CV062563 BNEL80d8 Barley EST endosperm library Hordeum vulgare subsp.
vulgare cDNA clone BNEL80d8 5' similar to COG1208, GCD1,
Nucleoside-diphosphate-sugar pyrophosphorylase involved
in lipopolysaccharide biosynthesis/translation
initiation factor 2B, gamma/epsilon subunits, mRNA
sequence
Length = 702
Score = 139 bits (298), Expect(2) = 1e-038
Identities = 55/72 (76%), Positives = 62/72 (86%)
Frame = +2 / +3
Query: 2 LATGAHVVGNVLVHESAKIGEGCLIGPDVAIGPGCVVEDGVRLSRCTVMRGVRIKKHACI 181
LA+GAHV+ NVLVHE+A IGEGCLIGPDVA+GPGCVV+ VRL RCTVMRG R+K HACI
Sbjct: 387 LASGAHVLXNVLVHETATIGEGCLIGPDVAVGPGCVVDARVRLVRCTVMRGARVKMHACI 566
Query: 182 SNSIIGWHSTVG 217
S SI GWHS +G
Sbjct: 567 SGSIGGWHSRLG 602
Score = 110 bits (235), Expect = 7e-024
Identities = 47/72 (65%), Positives = 52/72 (72%)
Frame = -3 / -3
Query: 216 PTVECQPIMLFEMQACFLIRTPRMTVQRESLTPSSTTHPGPMATSGPIRQPSPILALSCT 37
P +EC P ML EM AC R PR+TV S T +STTHPGP ATSGPIR PSPI+A+S T
Sbjct: 601 PNLECHPPMLPEMHACIFTRAPRITVHLTSRTRASTTHPGPTATSGPIRHPSPIVAVSWT 422
Query: 36 STLPTTCAPVAS 1
STL TCAP AS
Sbjct: 421 STLXRTCAPEAS 386
Score = 40.0 bits (81), Expect(2) = 1e-038
Identities = 17/26 (65%), Positives = 18/26 (69%)
Frame = +2 / +1
Query: 236 NMTILGEDVHVCDEVYSNGGVVLPHK 313
+MTILG VHV VY NG VLPHK
Sbjct: 619 DMTILGVGVHVFXRVYKNGRRVLPHK 696
>gb|BU972274.1|BU972274 HB21C22r BC Hordeum vulgare subsp. vulgare cDNA clone HB21C22
5-PRIME, mRNA sequence
Length = 433
Score = 157 bits (338), Expect = 4e-038
Identities = 61/73 (83%), Positives = 68/73 (93%)
Frame = +2 / +1
Query: 2 LATGAHVVGNVLVHESAKIGEGCLIGPDVAIGPGCVVEDGVRLSRCTVMRGVRIKKHACI 181
LA+GAHV+GNVLVHE+A IGEGCLIGPDVA+GPGCVVE GVRLSRCTVMRG R+KKHACI
Sbjct: 214 LASGAHVLGNVLVHETATIGEGCLIGPDVAVGPGCVVEAGVRLSRCTVMRGARVKKHACI 393
Query: 182 SNSIIGWHSTVGQ 220
S SI+ WHSTVG+
Sbjct: 394 SGSIVXWHSTVGK 432
Score = 123 bits (263), Expect = 1e-027
Identities = 51/72 (70%), Positives = 56/72 (77%)
Frame = -3 / -3
Query: 216 PTVECQPIMLFEMQACFLIRTPRMTVQRESLTPSSTTHPGPMATSGPIRQPSPILALSCT 37
PTVEC ML EM ACF R PR+TV +S TP+STTHPGP ATSGPIR PSPI+A+S T
Sbjct: 428 PTVECHXTMLPEMHACFFTRAPRITVHLDSRTPASTTHPGPTATSGPIRHPSPIVAVSWT 249
Query: 36 STLPTTCAPVAS 1
STLP TCAP AS
Sbjct: 248 STLPRTCAPEAS 213
>gb|CV059060.1|CV059060 BNEL43h6 Barley EST endosperm library Hordeum vulgare subsp.
vulgare cDNA clone BNEL43h6 5' similar to GDP-mannose
pyrophosphorylase, mRNA sequence
Length = 500
Score = 153 bits (329), Expect = 8e-037
Identities = 60/65 (92%), Positives = 64/65 (98%)
Frame = +2 / -3
Query: 161 IKKHACISNSIIGWHSTVGQWARIENMTILGEDVHVCDEVYSNGGVVLPHKEIKSSILKP 340
+KKHACIS SI+GWHSTVG+WAR+ENMTILGEDVHVCDEVYSNGGVVLPHKEIKSSILKP
Sbjct: 498 VKKHACISGSIVGWHSTVGKWARVENMTILGEDVHVCDEVYSNGGVVLPHKEIKSSILKP 319
Query: 341 EIVM* 355
EIVM*
Sbjct: 318 EIVM* 304
>gb|BI777049.2|BI777049 EBpi03_SQ001_M01_R pistil, 4 DPA, no treatment, cv Optic, EBpi03
Hordeum vulgare subsp. vulgare cDNA clone
EBpi03_SQ001_M01 5', mRNA sequence
Length = 245
Score = 89.5 bits (189), Expect(2) = 2e-035
Identities = 39/40 (97%), Positives = 39/40 (97%)
Frame = +2 / +3
Query: 239 MTILGEDVHVCDEVYSNGGVVLPHKEIKSSILKPEIVM*A 358
MTILGEDVHV DEVYSNGGVVLPHKEIKSSILKPEIVM*A
Sbjct: 96 MTILGEDVHVGDEVYSNGGVVLPHKEIKSSILKPEIVM*A 215
Score = 78.5 bits (165), Expect(2) = 2e-035
Identities = 30/32 (93%), Positives = 31/32 (96%)
Frame = +2 / +2
Query: 143 VMRGVRIKKHACISNSIIGWHSTVGQWARIEN 238
VMRGVRIKKHACI +SIIGWHSTVGQWARIEN
Sbjct: 2 VMRGVRIKKHACIGDSIIGWHSTVGQWARIEN 97
Score = 65.7 bits (137), Expect(2) = 1e-023
Identities = 28/42 (66%), Positives = 35/42 (83%)
Frame = -2 / -1
Query: 358 SSHDDLRLQNA*LDLFMWENNTAIAVHLITHMNILPQDSHIL 233
SSHDDLRL++A*LDL + +NNTA+AV L+T+M I QDSH L
Sbjct: 215 SSHDDLRLKDA*LDLLVRQNNTAVAVDLVTNMYIFSQDSHSL 90
Score = 62.5 bits (130), Expect(2) = 1e-023
Identities = 24/32 (75%), Positives = 28/32 (87%)
Frame = -3 / -3
Query: 237 FSIRAH*PTVECQPIMLFEMQACFLIRTPRMT 142
FS+RAH PTVECQP+ML M ACFL+RTPR+T
Sbjct: 96 FSMRAHCPTVECQPMMLSPMHACFLMRTPRIT 1
>gb|BU985075.1|BU985075 HF06A23r HF Hordeum vulgare subsp. vulgare cDNA clone HF06A23
5-PRIME, mRNA sequence
Length = 455
Score = 134 bits (287), Expect = 5e-031
Identities = 53/56 (94%), Positives = 56/56 (100%)
Frame = +2 / -1
Query: 188 SIIGWHSTVGQWARIENMTILGEDVHVCDEVYSNGGVVLPHKEIKSSILKPEIVM* 355
SI+GWHSTVG+WAR+ENMTILGEDVHVCDEVYSNGGVVLPHKEIKSSILKPEIVM*
Sbjct: 455 SIVGWHSTVGKWARVENMTILGEDVHVCDEVYSNGGVVLPHKEIKSSILKPEIVM* 288
>gb|CV056920.1|CV056920 BNEL22a9 Barley EST endosperm library Hordeum vulgare subsp.
vulgare cDNA clone BNEL22a9 5' similar to GDP-D-mannose
pyrophosphorylase, mRNA sequence
Length = 555
Score = 134 bits (287), Expect = 5e-031
Identities = 53/56 (94%), Positives = 56/56 (100%)
Frame = +2 / -2
Query: 188 SIIGWHSTVGQWARIENMTILGEDVHVCDEVYSNGGVVLPHKEIKSSILKPEIVM* 355
SI+GWHSTVG+WAR+ENMTILGEDVHVCDEVYSNGGVVLPHKEIKSSILKPEIVM*
Sbjct: 476 SIVGWHSTVGKWARVENMTILGEDVHVCDEVYSNGGVVLPHKEIKSSILKPEIVM* 309
>gb|BQ760241.1|BQ760241 EBpi07_SQ003_K16_R pistil, 12 DPA, no treatment, cv Optic, EBpi07
Hordeum vulgare subsp. vulgare cDNA clone
EBpi07_SQ003_K16 5', mRNA sequence
Length = 357
Score = 79.4 bits (167), Expect(2) = 2e-029
Identities = 34/36 (94%), Positives = 35/36 (97%)
Frame = +2 / +1
Query: 251 GEDVHVCDEVYSNGGVVLPHKEIKSSILKPEIVM*A 358
G+DVHV DEVYSNGGVVLPHKEIKSSILKPEIVM*A
Sbjct: 76 GKDVHVGDEVYSNGGVVLPHKEIKSSILKPEIVM*A 183
Score = 68.9 bits (144), Expect(2) = 2e-029
Identities = 26/27 (96%), Positives = 27/27 (100%)
Frame = +2 / +2
Query: 176 CISNSIIGWHSTVGQWARIENMTILGE 256
CISNSIIGWHSTVGQWARIENMTILG+
Sbjct: 2 CISNSIIGWHSTVGQWARIENMTILGK 82
>gb|CV055258.1|CV055258 BNEL118f1 Barley EST endosperm library Hordeum vulgare subsp.
vulgare cDNA clone BNEL118f1 5' similar to COG1208,
GCD1, Nucleoside-diphosphate-sugar pyrophosphorylase
involved in lipopolysaccharide biosynthesis/translation
initiation factor 2B, gamma/epsilon subunits, mRNA
sequence
Length = 778
Score = 118 bits (252), Expect = 3e-026
Identities = 48/64 (75%), Positives = 54/64 (84%)
Frame = +2 / -1
Query: 164 KKHACISNSIIGWHSTVGQWARIENMTILGEDVHVCDEVYSNGGVVLPHKEIKSSILKPE 343
+ HACIS+SI+GWH V +WAR+ENMTI GEDVHV DEVY GV LPHKEI+SSILKPE
Sbjct: 511 RSHACISDSIVGWHFAVDKWARVENMTIQGEDVHVFDEVYIIAGVGLPHKEIESSILKPE 332
Query: 344 IVM* 355
IVM*
Sbjct: 331 IVM* 320
Database: Hordeum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:16 PM
Number of letters in database: 175,134,539
Number of sequences in database: 312,970
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 286,039,559
Number of Sequences: 312970
Number of extensions: 4476618
Number of successful extensions: 64422
Number of sequences better than 1.0e-020: 25
length of database: 58,378,179
effective HSP length: 51
effective length of database: 42,416,709
effective search space used: 6829090149
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)