TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2521556.2.1
(1267 letters)
Database: Hordeum_nucl_with_EST.fasta
312,970 sequences; 175,134,539 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BU998635.1|BU998635 HI11L03r HI Hordeum vulgare subsp. v... 336 2e-091
gb|BF065899.1|BF065899 HV_CEb0014E21f Hordeum vulgare seedl... 115 6e-045
gb|BF065922.1|BF065922 HV_CEb0014F21f Hordeum vulgare seedl... 115 6e-045
gb|BQ471000.1|BQ471000 HX04K20r HX Hordeum vulgare subsp. v... 100 3e-043
gb|BQ470714.1|BQ470714 HX03M23r HX Hordeum vulgare subsp. v... 100 3e-043
gb|BF258539.2|BF258539 HVSMEf0016A04f Hordeum vulgare seedl... 162 8e-041
gb|BF253803.2|BF253803 HVSMEf0002C17f Hordeum vulgare seedl... 166 2e-040
gb|BF065573.1|BF065573 HV_CEb0012M23f Hordeum vulgare seedl... 116 1e-039
gb|BQ763153.1|BQ763153 EBro02_SQ007_K08_R root, 3 week, hyd... 163 2e-039
gb|BQ766637.1|BQ766637 EBro08_SQ006_N18_R root, 3 week, dro... 163 2e-039
gb|BF065944.1|BF065944 HV_CEb0014G19f Hordeum vulgare seedl... 115 4e-039
gb|BF065968.1|BF065968 HV_CEb0014H19f Hordeum vulgare seedl... 115 4e-039
gb|BF266117.2|BF266117 HV_CEa0014D16f Hordeum vulgare seedl... 114 5e-039
gb|BE559055.2|BE559055 HV_CEb0022I16f Hordeum vulgare seedl... 114 7e-039
gb|BF267384.2|BF267384 HV_CEa0017M06f Hordeum vulgare seedl... 114 9e-039
gb|BE216520.1|BE216520 HV_CEb0010L11f Hordeum vulgare seedl... 114 1e-038
gb|AL503324.1|AL503324 AL503324 Hordeum vulgare Barke roots... 119 4e-038
gb|CA030735.1|CA030735 HX07P10r HX Hordeum vulgare subsp. v... 96 6e-038
gb|CA030427.1|CA030427 HX07A15r HX Hordeum vulgare subsp. v... 96 6e-038
gb|BF260718.2|BF260718 HVSMEf0022M04f Hordeum vulgare seedl... 157 1e-037
gb|AL450842.1|AL450842 AL450842 Hordeum vulgare Barke etiol... 108 5e-037
gb|BF621550.2|BF621550 HVSMEa0011F24f Hordeum vulgare seedl... 119 5e-037
gb|BF260845.2|BF260845 HVSMEf0023B13f Hordeum vulgare seedl... 153 2e-036
gb|BM442923.2|BM442923 EBro02_SQ001_N17_R root, 3 week, hyd... 153 2e-036
gb|AL504140.1|AL504140 AL504140 Hordeum vulgare Barke roots... 133 3e-036
gb|BF065604.1|BF065604 HV_CEb0012O15f Hordeum vulgare seedl... 112 3e-036
gb|CA022668.1|CA022668 HZ44A05r HZ Hordeum vulgare subsp. v... 141 9e-036
gb|BF253797.2|BF253797 HVSMEf0002C11f Hordeum vulgare seedl... 148 6e-035
gb|AV922724.1|AV922724 AV922724 K. Sato unpublished cDNA li... 99 2e-034
gb|BE215757.1|BE215757 HV_CEb0008G14f Hordeum vulgare seedl... 114 3e-034
gb|BG343645.1|BG343645 HVSMEg0006B22f Hordeum vulgare pre-a... 96 3e-034
gb|BM817225.1|BM817225 HC109B04_T3.ab1 HC Hordeum vulgare s... 113 4e-034
gb|BM369733.2|BM369733 EBem07_SQ004_H07_R embryo, 28 DPA, n... 121 5e-034
gb|BU989585.1|BU989585 HF22C07r HF Hordeum vulgare subsp. v... 121 1e-033
gb|BF622224.2|BF622224 HVSMEa0002C05f Hordeum vulgare seedl... 119 5e-033
gb|BQ467879.1|BQ467879 HR01D11r HR Hordeum vulgare subsp. v... 113 6e-033
gb|BF622215.3|BF622215 HVSMEa0002A20f Hordeum vulgare seedl... 119 8e-033
gb|BM375338.2|BM375338 EBem06_SQ003_A18_R embryo, 21 DPA, n... 141 9e-033
gb|BF624618.2|BF624618 HVSMEa0017E14f Hordeum vulgare seedl... 119 3e-032
gb|BF629286.3|BF629286 HVSMEb0010K15f Hordeum vulgare seedl... 119 3e-032
gb|BF621862.3|BF621862 HVSMEa0001C05f Hordeum vulgare seedl... 119 3e-032
gb|BG299731.1|BG299731 HVSMEa0021J09f Hordeum vulgare seedl... 119 3e-032
gb|BQ466487.1|BQ466487 HT02K21r HT Hordeum vulgare subsp. v... 119 3e-032
gb|BF622512.2|BF622512 HVSMEa0004K18f Hordeum vulgare seedl... 119 3e-032
gb|BF624202.2|BF624202 HVSMEa0012J22f Hordeum vulgare seedl... 119 3e-032
gb|AL503233.1|AL503233 AL503233 Hordeum vulgare Barke roots... 133 6e-032
gb|BE214207.2|BE214207 HV_CEb0002K18f Hordeum vulgare seedl... 138 6e-032
gb|BF255189.1|BF255189 HVSMEf0006D04f Hordeum vulgare seedl... 135 1e-031
gb|BG299389.1|BG299389 HVSMEa0019L19f Hordeum vulgare seedl... 137 1e-031
gb|BG368894.1|BG368894 HVSMEi0021D06f Hordeum vulgare 20 DA... 137 1e-031
gb|BM816911.1|BM816911 HB106C10_SK.ab1 HB Hordeum vulgare s... 100 2e-031
gb|AF109194.1|AF109194 Hordeum vulgare glutathione-S-transf... 113 2e-031
gb|BF620788.2|BF620788 HVSMEc0020N16f Hordeum vulgare seedl... 113 2e-031
gb|BF623386.2|BF623386 HVSMEa0016I09f Hordeum vulgare seedl... 107 2e-031
gb|BE558770.2|BE558770 HV_CEb0020E13f Hordeum vulgare seedl... 113 2e-031
gb|CK122333.1|CK122333 BES1824102o06 BES1824 Hordeum vulgar... 113 2e-031
gb|BI959586.1|BI959586 HVSMEn0020E21f Hordeum vulgare rachi... 113 2e-031
gb|CA028145.1|CA028145 HZ61C04r HZ Hordeum vulgare subsp. v... 113 2e-031
gb|CA024893.1|CA024893 HZ50K02r HZ Hordeum vulgare subsp. v... 113 2e-031
gb|BQ460114.1|BQ460114 HA07C20r HA Hordeum vulgare subsp. v... 113 2e-031
gb|CA012182.1|CA012182 HT04L19r HT Hordeum vulgare subsp. v... 113 2e-031
gb|CA001613.1|CA001613 HS05B06r HS Hordeum vulgare subsp. v... 113 2e-031
gb|BQ467510.1|BQ467510 HS04A05r HS Hordeum vulgare subsp. v... 113 2e-031
gb|BJ471554.1|BJ471554 BJ471554 K. Sato unpublished cDNA li... 113 2e-031
gb|BF621473.2|BF621473 HVSMEa0011B16f Hordeum vulgare seedl... 117 3e-031
gb|BF065184.1|BF065184 HV_CEb0023O18f Hordeum vulgare seedl... 117 3e-031
gb|BF259078.2|BF259078 HVSMEf0017J19f Hordeum vulgare seedl... 127 3e-031
gb|BF625550.2|BF625550 HVSMEa0011E08f Hordeum vulgare seedl... 100 3e-031
gb|BF622191.2|BF622191 HVSMEa0001P16f Hordeum vulgare seedl... 118 4e-031
gb|BE196654.3|BE196654 HVSMEh0092O09f Hordeum vulgare 5-45 ... 112 5e-031
gb|BQ465287.1|BQ465287 HU03D01r HU Hordeum vulgare subsp. v... 107 5e-031
gb|BF619363.2|BF619363 HVSMEc0016M05f Hordeum vulgare seedl... 111 7e-031
gb|BE411006.1|BE411006 ISC001.D03F990519 ITEC ISC Barley Le... 111 7e-031
gb|CA014271.1|CA014271 HT10O05r HT Hordeum vulgare subsp. v... 115 1e-030
gb|CA014093.1|CA014093 HT10F20r HT Hordeum vulgare subsp. v... 115 1e-030
gb|CA014392.1|CA014392 HT11D14r HT Hordeum vulgare subsp. v... 115 1e-030
gb|BQ464763.1|BQ464763 HU01G03T HU Hordeum vulgare subsp. v... 115 1e-030
gb|CA013624.1|CA013624 HT09A14r HT Hordeum vulgare subsp. v... 115 1e-030
gb|CA015258.1|CA015258 HT13M04r HT Hordeum vulgare subsp. v... 115 1e-030
gb|CA015289.1|CA015289 HT13N17r HT Hordeum vulgare subsp. v... 115 1e-030
gb|CA015590.1|CA015590 HT14M12r HT Hordeum vulgare subsp. v... 115 1e-030
gb|AV932609.1|AV932609 AV932609 K. Sato unpublished cDNA li... 113 1e-030
gb|CA015381.1|CA015381 HT14C07r HT Hordeum vulgare subsp. v... 115 1e-030
gb|BF622265.2|BF622265 HVSMEa0002G13f Hordeum vulgare seedl... 99 2e-030
gb|BF625649.2|BF625649 HVSMEa0013B21f Hordeum vulgare seedl... 110 2e-030
gb|BQ467646.1|BQ467646 HS04G23r HS Hordeum vulgare subsp. v... 110 2e-030
gb|CA017476.1|CA017476 HV05F04r HV Hordeum vulgare subsp. v... 105 3e-030
gb|BI949438.1|BI949438 HVSMEl0013O11f Hordeum vulgare spike... 133 3e-030
gb|BE195630.3|BE195630 HVSMEh0089P24f Hordeum vulgare 5-45 ... 100 3e-030
gb|BQ471258.1|BQ471258 HV01N17T HV Hordeum vulgare subsp. v... 132 4e-030
gb|CA029484.1|CA029484 HZ65F17r HZ Hordeum vulgare subsp. v... 109 5e-030
gb|AV834582.1|AV834582 AV834582 K. Sato unpublished cDNA li... 92 6e-030
gb|BF265689.1|BF265689 HV_CEa0013B06f Hordeum vulgare seedl... 108 6e-030
gb|BF627874.2|BF627874 HVSMEb0006C01f Hordeum vulgare seedl... 130 1e-029
gb|CA012539.1|CA012539 HT05L11r HT Hordeum vulgare subsp. v... 102 2e-029
gb|CA017465.1|CA017465 HV05E15r HV Hordeum vulgare subsp. v... 105 2e-029
gb|BF257698.2|BF257698 HVSMEf0013K02f Hordeum vulgare seedl... 107 2e-029
gb|BQ765092.1|BQ765092 EBca01_SQ005_D19_R carpel, pre-anthe... 106 3e-029
gb|CA001781.1|CA001781 HS05J03r HS Hordeum vulgare subsp. v... 106 3e-029
gb|BI776549.2|BI776549 EBpi05_SQ001_N14_R pistil, 8 DPA, no... 106 3e-029
gb|CA023217.1|CA023217 HZ45J07r HZ Hordeum vulgare subsp. v... 106 3e-029
gb|CA004080.1|CA004080 HS16H17r HS Hordeum vulgare subsp. v... 110 4e-029
gb|BF622486.2|BF622486 HVSMEa0004I15f Hordeum vulgare seedl... 128 5e-029
gb|BF623684.2|BF623684 HVSMEa0003M02f Hordeum vulgare seedl... 111 6e-029
gb|BI948705.1|BI948705 HVSMEl0010J03f Hordeum vulgare spike... 109 8e-029
gb|BM369749.2|BM369749 EBem07_SQ004_H24_R embryo, 28 DPA, n... 105 8e-029
gb|BF625970.2|BF625970 HVSMEa0015B01f Hordeum vulgare seedl... 110 1e-028
gb|BF622591.2|BF622591 HVSMEa0007C21f Hordeum vulgare seedl... 110 1e-028
gb|BF619549.2|BF619549 HVSMEc0004A15f Hordeum vulgare seedl... 105 1e-028
gb|AL505815.1|AL505815 AL505815 Hordeum vulgare Barke roots... 110 1e-028
gb|BF264380.2|BF264380 HV_CEa0009E08f Hordeum vulgare seedl... 81 2e-028
gb|BI954235.1|BI954235 HVSMEm0016M03f Hordeum vulgare green... 81 2e-028
gb|BF623987.2|BF623987 HVSMEa0008F14f Hordeum vulgare seedl... 81 2e-028
gb|BG299804.2|BG299804 HVSMEa0021O04f Hordeum vulgare seedl... 118 2e-028
gb|BF268066.2|BF268066 HV_CEa0019M05f Hordeum vulgare seedl... 103 2e-028
gb|AV924070.1|AV924070 AV924070 K. Sato unpublished cDNA li... 99 2e-028
gb|BI950533.1|BI950533 HVSMEl0021D14f Hordeum vulgare spike... 99 3e-028
gb|BI949974.1|BI949974 HVSMEl0017G12f Hordeum vulgare spike... 110 4e-028
gb|BE196145.3|BE196145 HVSMEh0091H19f Hordeum vulgare 5-45 ... 102 5e-028
gb|CA006848.1|CA006848 HU05N24r HU Hordeum vulgare subsp. v... 103 5e-028
gb|BQ466475.1|BQ466475 HT02K07r HT Hordeum vulgare subsp. v... 115 1e-027
gb|CA007742.1|CA007742 HU08O02r HU Hordeum vulgare subsp. v... 107 1e-027
gb|BI947723.1|BI947723 HVSMEl0006J20f Hordeum vulgare spike... 123 2e-027
gb|BF622296.2|BF622296 HVSMEa0002K01f Hordeum vulgare seedl... 99 2e-027
gb|BF622298.2|BF622298 HVSMEa0002K03f Hordeum vulgare seedl... 99 2e-027
gb|CA019652.1|CA019652 HV12K19r HV Hordeum vulgare subsp. v... 105 3e-027
gb|BI948082.1|BI948082 HVSMEl0008C04f Hordeum vulgare spike... 106 3e-027
gb|CA027026.1|CA027026 HZ57K21r HZ Hordeum vulgare subsp. v... 108 3e-027
gb|BQ466342.1|BQ466342 HT02E05r HT Hordeum vulgare subsp. v... 115 6e-027
gb|BQ466550.1|BQ466550 HT02N19r HT Hordeum vulgare subsp. v... 115 6e-027
gb|BI777370.2|BI777370 EBro04_SQ001_A06_R root, 3 week, sal... 80 6e-027
gb|BF259210.2|BF259210 HVSMEf0018C22f Hordeum vulgare seedl... 120 8e-027
gb|BQ763720.1|BQ763720 EBro03_SQ005_A10_R root, 3 week, wat... 121 1e-026
gb|BJ548902.1|BJ548902 BJ548902 K. Sato unpublished cDNA li... 89 1e-026
gb|BF257478.2|BF257478 HVSMEf0013A10f Hordeum vulgare seedl... 98 2e-026
gb|BI949614.1|BI949614 HVSMEl0014O15f Hordeum vulgare spike... 105 2e-026
gb|BG342989.2|BG342989 HVSMEg0001J14f Hordeum vulgare pre-a... 105 2e-026
gb|BE421080.1|BE421080 HWM005.F01 ITEC HWM Barley Leaf Libr... 104 3e-026
gb|BI953646.1|BI953646 HVSMEm0013K24f Hordeum vulgare green... 104 3e-026
gb|BF626678.2|BF626678 HVSMEb0001A21f Hordeum vulgare seedl... 104 3e-026
gb|BE602564.3|BE602564 HVSMEh0100A01f Hordeum vulgare 5-45 ... 104 3e-026
gb|BJ547042.1|BJ547042 BJ547042 K. Sato unpublished cDNA li... 104 3e-026
gb|BJ547797.1|BJ547797 BJ547797 K. Sato unpublished cDNA li... 104 3e-026
gb|BJ547881.1|BJ547881 BJ547881 K. Sato unpublished cDNA li... 104 3e-026
gb|AV926646.1|AV926646 AV926646 K. Sato unpublished cDNA li... 104 3e-026
gb|BJ547768.1|BJ547768 BJ547768 K. Sato unpublished cDNA li... 104 3e-026
gb|BE216017.1|BE216017 HV_CEb0009C05f Hordeum vulgare seedl... 104 3e-026
gb|BJ547685.1|BJ547685 BJ547685 K. Sato unpublished cDNA li... 104 3e-026
gb|AV933203.1|AV933203 AV933203 K. Sato unpublished cDNA li... 104 3e-026
gb|AV934138.1|AV934138 AV934138 K. Sato unpublished cDNA li... 104 3e-026
gb|AV934268.1|AV934268 AV934268 K. Sato unpublished cDNA li... 104 3e-026
gb|BJ547661.1|BJ547661 BJ547661 K. Sato unpublished cDNA li... 104 3e-026
gb|BJ469586.1|BJ469586 BJ469586 K. Sato unpublished cDNA li... 104 3e-026
gb|BJ547290.1|BJ547290 BJ547290 K. Sato unpublished cDNA li... 104 3e-026
gb|BJ547528.1|BJ547528 BJ547528 K. Sato unpublished cDNA li... 104 3e-026
gb|BJ547269.1|BJ547269 BJ547269 K. Sato unpublished cDNA li... 104 3e-026
gb|AV923513.1|AV923513 AV923513 K. Sato unpublished cDNA li... 104 3e-026
gb|AV933046.1|AV933046 AV933046 K. Sato unpublished cDNA li... 104 3e-026
gb|BJ546949.1|BJ546949 BJ546949 K. Sato unpublished cDNA li... 104 3e-026
gb|BJ547507.1|BJ547507 BJ547507 K. Sato unpublished cDNA li... 104 3e-026
gb|AV923424.1|AV923424 AV923424 K. Sato unpublished cDNA li... 104 3e-026
gb|AV926037.1|AV926037 AV926037 K. Sato unpublished cDNA li... 104 3e-026
gb|BJ547611.1|BJ547611 BJ547611 K. Sato unpublished cDNA li... 104 3e-026
gb|AV926802.1|AV926802 AV926802 K. Sato unpublished cDNA li... 104 3e-026
gb|BJ546871.1|BJ546871 BJ546871 K. Sato unpublished cDNA li... 104 3e-026
gb|AV925064.1|AV925064 AV925064 K. Sato unpublished cDNA li... 104 3e-026
gb|AV924773.1|AV924773 AV924773 K. Sato unpublished cDNA li... 104 3e-026
gb|BF267193.3|BF267193 HV_CEa0017D12f Hordeum vulgare seedl... 99 3e-026
gb|BE421272.1|BE421272 HWM007.F01 ITEC HWM Barley Leaf Libr... 104 4e-026
gb|BJ547778.1|BJ547778 BJ547778 K. Sato unpublished cDNA li... 104 4e-026
gb|BJ547635.1|BJ547635 BJ547635 K. Sato unpublished cDNA li... 104 4e-026
gb|BF623830.2|BF623830 HVSMEa0007D03f Hordeum vulgare seedl... 98 4e-026
gb|BI953138.1|BI953138 HVSMEm0011D12f Hordeum vulgare green... 104 4e-026
gb|CA025920.1|CA025920 HZ53I14r HZ Hordeum vulgare subsp. v... 111 4e-026
gb|BJ544235.1|BJ544235 BJ544235 K. Sato unpublished cDNA li... 91 6e-026
gb|AV908971.1|AV908971 AV908971 K. Sato unpublished cDNA li... 91 6e-026
gb|BE214950.1|BE214950 HV_CEb0005F03f Hordeum vulgare seedl... 91 8e-026
gb|BI948427.1|BI948427 HVSMEl0009I08f Hordeum vulgare spike... 105 1e-025
gb|CV058333.1|CV058333 BNEL36h8 Barley EST endosperm librar... 103 1e-025
gb|BI778185.2|BI778185 EBro07_SQ002_H11_R root, 3 week, red... 102 1e-025
gb|CV060337.1|CV060337 BNEL57a4 Barley EST endosperm librar... 103 1e-025
gb|AV933552.1|AV933552 AV933552 K. Sato unpublished cDNA li... 104 1e-025
gb|BF622044.2|BF622044 HVSMEa0001J20f Hordeum vulgare seedl... 101 1e-025
gb|AV913623.1|AV913623 AV913623 K. Sato unpublished cDNA li... 94 1e-025
gb|BQ471126.1|BQ471126 HV01D06T HV Hordeum vulgare subsp. v... 94 1e-025
gb|BG368482.1|BG368482 HVSMEi0019D10f Hordeum vulgare 20 DA... 104 1e-025
gb|BQ472178.1|BQ472178 HV04K06r HV Hordeum vulgare subsp. v... 94 1e-025
gb|CA013731.1|CA013731 HT09F05r HT Hordeum vulgare subsp. v... 91 2e-025
gb|BI949114.1|BI949114 HVSMEl0012G22f Hordeum vulgare spike... 104 3e-025
gb|BF631562.2|BF631562 HVSMEb0016G15f Hordeum vulgare seedl... 104 3e-025
gb|BJ544573.1|BJ544573 BJ544573 K. Sato unpublished cDNA li... 89 3e-025
gb|BF263502.3|BF263502 HV_CEa0006O15f Hordeum vulgare seedl... 102 3e-025
gb|BF255920.2|BF255920 HVSMEf0008D10f Hordeum vulgare seedl... 115 5e-025
gb|BF625851.2|BF625851 HVSMEa0013N14f Hordeum vulgare seedl... 99 5e-025
gb|BI960661.1|BI960661 HVSMEn0025K13f Hordeum vulgare rachi... 115 7e-025
gb|BG299996.1|BG299996 HVSMEa0022O20f Hordeum vulgare seedl... 92 7e-025
gb|BM442945.2|BM442945 EBro02_SQ001_P16_R root, 3 week, hyd... 114 9e-025
gb|BI954877.1|BI954877 HVSMEm0020D03f Hordeum vulgare green... 81 1e-024
gb|BQ762933.1|BQ762933 EBro02_SQ006_H16 _R root, 3 week, hy... 87 1e-024
gb|BQ765875.1|BQ765875 EBro03_SQ008_M07_R root, 3 week, wat... 104 1e-024
gb|BF255868.2|BF255868 HVSMEf0008A20f Hordeum vulgare seedl... 90 2e-024
gb|CA029001.1|CA029001 HZ63O10r HZ Hordeum vulgare subsp. v... 90 2e-024
gb|AL504826.1|AL504826 AL504826 Hordeum vulgare Barke roots... 109 2e-024
gb|CA004785.1|CA004785 HS18K23r HS Hordeum vulgare subsp. v... 94 2e-024
gb|CA011829.1|CA011829 HT03K17r HT Hordeum vulgare subsp. v... 85 3e-024
gb|CA028873.1|CA028873 HZ63H22r HZ Hordeum vulgare subsp. v... 90 3e-024
gb|CA027925.1|CA027925 HZ60H09r HZ Hordeum vulgare subsp. v... 90 3e-024
gb|BE215767.2|BE215767 HV_CEb0008G24f Hordeum vulgare seedl... 57 6e-024
gb|BF254945.2|BF254945 HVSMEf0005H21f Hordeum vulgare seedl... 111 8e-024
gb|BF258410.2|BF258410 HVSMEf0015K10f Hordeum vulgare seedl... 67 9e-024
gb|BE214393.3|BE214393 HV_CEb0003F04f Hordeum vulgare seedl... 86 1e-023
gb|BJ548150.1|BJ548150 BJ548150 K. Sato unpublished cDNA li... 79 2e-023
gb|BF623190.3|BF623190 HVSMEa0015C04f Hordeum vulgare seedl... 94 2e-023
gb|BF624808.3|BF624808 HVSMEa0017M20f Hordeum vulgare seedl... 57 2e-023
gb|AV932402.1|AV932402 AV932402 K. Sato unpublished cDNA li... 104 2e-023
gb|BF624359.3|BF624359 HVSMEa0014E11f Hordeum vulgare seedl... 99 2e-023
gb|BF066033.2|BF066033 HV_CEb0014K12f Hordeum vulgare seedl... 68 4e-023
gb|CB875019.1|CB875019 HX07A15w HX Hordeum vulgare subsp. v... 96 5e-023
gb|CB875325.1|CB875325 HX07P10w HX Hordeum vulgare subsp. v... 96 5e-023
gb|BF623248.2|BF623248 HVSMEa0016A09f Hordeum vulgare seedl... 108 6e-023
gb|BF624504.3|BF624504 HVSMEa0016N24f Hordeum vulgare seedl... 108 6e-023
gb|BI953615.1|BI953615 HVSMEm0013J07f Hordeum vulgare green... 81 1e-022
gb|CA004703.1|CA004703 HS18G22r HS Hordeum vulgare subsp. v... 107 1e-022
gb|BI952081.1|BI952081 HVSMEm0004I21f Hordeum vulgare green... 105 4e-022
gb|BF258960.3|BF258960 HVSMEf0017C18f Hordeum vulgare seedl... 99 7e-022
gb|BQ767833.1|BQ767833 EBro08_SQ009_P23 _R root, 3 week, dr... 58 9e-022
gb|BI948019.1|BI948019 HVSMEl0007N21f Hordeum vulgare spike... 104 1e-021
gb|AV923925.1|AV923925 AV923925 K. Sato unpublished cDNA li... 104 1e-021
gb|BJ546858.1|BJ546858 BJ546858 K. Sato unpublished cDNA li... 104 1e-021
gb|BJ546968.1|BJ546968 BJ546968 K. Sato unpublished cDNA li... 104 1e-021
gb|BJ547072.1|BJ547072 BJ547072 K. Sato unpublished cDNA li... 104 1e-021
gb|BJ547144.1|BJ547144 BJ547144 K. Sato unpublished cDNA li... 104 1e-021
gb|BJ547544.1|BJ547544 BJ547544 K. Sato unpublished cDNA li... 104 1e-021
gb|BJ547741.1|BJ547741 BJ547741 K. Sato unpublished cDNA li... 104 1e-021
gb|BJ547849.1|BJ547849 BJ547849 K. Sato unpublished cDNA li... 104 1e-021
gb|BJ546927.1|BJ546927 BJ546927 K. Sato unpublished cDNA li... 80 2e-021
gb|BF624576.2|BF624576 HVSMEa0017C18f Hordeum vulgare seedl... 103 3e-021
gb|BJ546861.1|BJ546861 BJ546861 K. Sato unpublished cDNA li... 103 3e-021
gb|BI952820.1|BI952820 HVSMEm0007N21f Hordeum vulgare green... 64 3e-021
gb|BE214864.3|BE214864 HV_CEb0004O15f Hordeum vulgare seedl... 80 3e-021
gb|BF625840.2|BF625840 HVSMEa0013N01f Hordeum vulgare seedl... 102 4e-021
gb|BI947729.1|BI947729 HVSMEl0006K08f Hordeum vulgare spike... 102 5e-021
gb|BF623533.3|BF623533 HVSMEa0002J15f Hordeum vulgare seedl... 101 7e-021
gb|BF628237.2|BF628237 HVSMEb0003H24f Hordeum vulgare seedl... 101 7e-021
gb|BI946932.1|BI946932 HVSMEl0002N24f Hordeum vulgare spike... 101 7e-021
gb|BE214034.1|BE214034 HV_CEb0001P12f Hordeum vulgare seedl... 101 7e-021
gb|BE215069.1|BE215069 HV_CEb0005L08f Hordeum vulgare seedl... 101 7e-021
gb|BE215347.2|BE215347 HV_CEb0006I19f Hordeum vulgare seedl... 101 7e-021
gb|BF630948.3|BF630948 HVSMEb0014I05f Hordeum vulgare seedl... 101 7e-021
gb|BQ740072.1|BQ740072 HC04F04 HC Hordeum vulgare subsp. vu... 101 7e-021
gb|BF257083.2|BF257083 HVSMEf0011M23f Hordeum vulgare seedl... 57 8e-021
>gb|BU998635.1|BU998635 HI11L03r HI Hordeum vulgare subsp. vulgare cDNA clone HI11L03
5-PRIME, mRNA sequence
Length = 641
Score = 336 bits (727), Expect = 2e-091
Identities = 140/172 (81%), Positives = 150/172 (87%)
Frame = +2 / +3
Query: 92 LMLFGSWASSYTHRVQLALRLKGLEFDYVEEDLGNKSDELLRHNPVHKKVPVLVHGGRAL 271
L LFGSWASSYTHRVQLA+RLKGL F+Y EEDL NKSD LLRHNPV+ KVPVLVH GR+L
Sbjct: 126 LKLFGSWASSYTHRVQLAMRLKGLGFEYAEEDLRNKSDALLRHNPVYNKVPVLVHDGRSL 305
Query: 272 PESVIILQYLDDAWPETRPLLPADAFDRALARFWCHFADDKLGPAVGTVFASTGEDQEAA 451
ESVIILQYLDDA+P TR LLPADAFDRA+ARFWCHF DDKLGPAVG VFASTGE+QEAA
Sbjct: 306 AESVIILQYLDDAFPATRQLLPADAFDRAVARFWCHFGDDKLGPAVGAVFASTGEEQEAA 485
Query: 452 VRQVHENLALIESELRDGAXXXXXXXXXDEVGLLDVVLGCGSYWLAVFEEVT 607
VRQVHENLAL+E+ELR+GA DEVG LDVVLGCGSYWLAVFEEVT
Sbjct: 486 VRQVHENLALLEAELREGAFKGRRFFGGDEVGFLDVVLGCGSYWLAVFEEVT 641
Score = 164 bits (352), Expect(2) = 4e-041
Identities = 73/140 (52%), Positives = 74/140 (52%)
Frame = -2 / -2
Query: 486 SIRARFSCTWRTAASWSSPVDANTVPTAGPSLSSAKWHQNXXXXXXXXXXXXXXXXXXXX 307
S ARFSCTWRTAAS SSPVDANT PTAGPSLSS KWHQ
Sbjct: 520 SSSARFSCTWRTAASCSSPVDANTAPTAGPSLSSPKWHQKRATARSKASAGRSWRVAGKA 341
Query: 306 XXRYWRIMTDSGSARPPWTSTGTFLWTGLWXXXXXXXXXXXXXXXXXXXXXXXSASCTRC 127
RYWR+MTDS RP WTSTGT L TGLW ASCTR
Sbjct: 340 SSRYWRMMTDSARERPSWTSTGTLL*TGLWRSSASLLLRRSSSAYSKPSPFSRMASCTRW 161
Query: 126 VYELAHDPNSISGDAAGGIA 67
VYELAHDPNS S A A
Sbjct: 160 VYELAHDPNSFSCSGAAAPA 101
Score = 80.8 bits (170), Expect(3) = 5e-022
Identities = 36/50 (72%), Positives = 40/50 (80%)
Frame = -1 / -1
Query: 391 VVGEVAPEPRERAVEGVGGEQRAGLRPGVVKVLEDNDGLRERAAAVDEHG 242
VV EVAPE + AVEGVGGE+ AG R GVV+VLED+DGL E AA VDEHG
Sbjct: 425 VVAEVAPEASDGAVEGVGGEELAGGREGVVEVLEDDDGLGEGAAVVDEHG 276
Score = 44.1 bits (90), Expect(3) = 5e-022
Identities = 21/32 (65%), Positives = 22/32 (68%)
Frame = -1 / -1
Query: 169 ELQALEPQRQLHAVRVRARPRPEQHQRGCRRR 74
E + L P QLHAV VRARPRPEQ Q RRR
Sbjct: 203 EAEPL*PHGQLHAVGVRARPRPEQLQLQRRRR 108
Score = 24.9 bits (48), Expect(2) = 4e-041
Identities = 11/12 (91%), Positives = 11/12 (91%)
Frame = -2 / -2
Query: 606 VTSSNTASQ*EP 571
VTSS TASQ*EP
Sbjct: 640 VTSSKTASQ*EP 605
Score = 22.1 bits (42), Expect(3) = 5e-022
Identities = 8/11 (72%), Positives = 9/11 (81%)
Frame = -1 / -1
Query: 607 GHLLEHGEPVG 575
G LLE G+PVG
Sbjct: 641 GDLLEDGQPVG 609
>gb|BF065899.1|BF065899 HV_CEb0014E21f Hordeum vulgare seedling green leaf EST library
HVcDNA0005 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEb0014E21f, mRNA sequence
Length = 825
Score = 115 bits (245), Expect(5) = 6e-045
Identities = 43/78 (55%), Positives = 62/78 (79%)
Frame = +2 / +1
Query: 80 AASPLMLFGSWASSYTHRVQLALRLKGLEFDYVEEDLGNKSDELLRHNPVHKKVPVLVHG 259
A + LFG WAS Y +V+ AL +KG+E++Y+EEDL NKSD+LL HNPVHKKVPVL++
Sbjct: 16 AREKVKLFGMWASPYVLKVKWALSIKGVEYEYLEEDLRNKSDDLLEHNPVHKKVPVLLYH 195
Query: 260 GRALPESVIILQYLDDAW 313
G+ + ES +I++++D+AW
Sbjct: 196 GKPVAESDVIVEFVDEAW 249
Score = 47.3 bits (97), Expect(5) = 6e-045
Identities = 17/43 (39%), Positives = 25/43 (58%)
Frame = +2 / +1
Query: 329 LLPADAFDRALARFWCHFADDKLGPAVGTVFASTGEDQEAAVR 457
+LP D ++RA+ARFW F DKL P + F + + + A R
Sbjct: 268 ILPGDPYERAMARFWVRFVHDKLSPPIWKWFTTAPGEDQEAAR 396
Score = 37.3 bits (75), Expect(5) = 6e-045
Identities = 17/48 (35%), Positives = 24/48 (50%)
Frame = +3 / +1
Query: 609 GCALVDADAFPRFHAWLRDFEALDEVRETIPAVDRLLEYARGLRHMLL 752
G LV + FP AW+ F V++ PAV+RL+ R +R L
Sbjct: 541 GVRLVTEERFPSLSAWMGRFLGSPPVKDHPPAVERLIPRYRAMREAFL 684
Score = 33.1 bits (66), Expect(5) = 6e-045
Identities = 12/27 (44%), Positives = 20/27 (74%)
Frame = +2 / +1
Query: 536 DEVGLLDVVLGCGSYWLAVFEEVTGVR 616
+ VGL+D+ LG +Y + ++EE+ GVR
Sbjct: 469 ESVGLVDLSLGAMAYVVPMYEEIVGVR 549
Score = 22.6 bits (43), Expect(5) = 6e-045
Identities = 12/25 (48%), Positives = 14/25 (56%)
Frame = +2 / +1
Query: 431 GEDQEAAVRQVHENLALIESELRDG 505
GEDQEAA E L ++E L G
Sbjct: 373 GEDQEAARGASVEQLQVLEELLAVG 447
>gb|BF065922.1|BF065922 HV_CEb0014F21f Hordeum vulgare seedling green leaf EST library
HVcDNA0005 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEb0014F21f, mRNA sequence
Length = 825
Score = 115 bits (245), Expect(5) = 6e-045
Identities = 43/78 (55%), Positives = 62/78 (79%)
Frame = +2 / +1
Query: 80 AASPLMLFGSWASSYTHRVQLALRLKGLEFDYVEEDLGNKSDELLRHNPVHKKVPVLVHG 259
A + LFG WAS Y +V+ AL +KG+E++Y+EEDL NKSD+LL HNPVHKKVPVL++
Sbjct: 16 AREKVKLFGMWASPYVLKVKWALSIKGVEYEYLEEDLRNKSDDLLEHNPVHKKVPVLLYH 195
Query: 260 GRALPESVIILQYLDDAW 313
G+ + ES +I++++D+AW
Sbjct: 196 GKPVAESDVIVEFVDEAW 249
Score = 47.3 bits (97), Expect(5) = 6e-045
Identities = 17/43 (39%), Positives = 25/43 (58%)
Frame = +2 / +1
Query: 329 LLPADAFDRALARFWCHFADDKLGPAVGTVFASTGEDQEAAVR 457
+LP D ++RA+ARFW F DKL P + F + + + A R
Sbjct: 268 ILPGDPYERAMARFWVRFVHDKLSPPIWKWFTTAPGEDQEAAR 396
Score = 37.3 bits (75), Expect(5) = 6e-045
Identities = 17/48 (35%), Positives = 24/48 (50%)
Frame = +3 / +1
Query: 609 GCALVDADAFPRFHAWLRDFEALDEVRETIPAVDRLLEYARGLRHMLL 752
G LV + FP AW+ F V++ PAV+RL+ R +R L
Sbjct: 541 GVRLVTEERFPSLSAWMGRFLGSPPVKDHPPAVERLIPRYRAMREAFL 684
Score = 33.1 bits (66), Expect(5) = 6e-045
Identities = 12/27 (44%), Positives = 20/27 (74%)
Frame = +2 / +1
Query: 536 DEVGLLDVVLGCGSYWLAVFEEVTGVR 616
+ VGL+D+ LG +Y + ++EE+ GVR
Sbjct: 469 ESVGLVDLSLGAMAYVVPMYEEIVGVR 549
Score = 22.6 bits (43), Expect(5) = 6e-045
Identities = 12/25 (48%), Positives = 14/25 (56%)
Frame = +2 / +1
Query: 431 GEDQEAAVRQVHENLALIESELRDG 505
GEDQEAA E L ++E L G
Sbjct: 373 GEDQEAARGASVEQLQVLEELLAVG 447
>gb|BQ471000.1|BQ471000 HX04K20r HX Hordeum vulgare subsp. vulgare cDNA clone HX04K20
5-PRIME, mRNA sequence
Length = 473
Score = 100 bits (212), Expect(2) = 3e-043
Identities = 42/56 (75%), Positives = 46/56 (82%)
Frame = +2 / +2
Query: 449 AVRQVHENLALIESELRDGAXXXXXXXXXDEVGLLDVVLGCGSYWLAVFEEVTGVR 616
AVRQVHENLAL+E+ELR+GA DEVG LDVVLGCGSYWLAVFEEVTGV+
Sbjct: 11 AVRQVHENLALLEAELREGAFKGRRFFGGDEVGFLDVVLGCGSYWLAVFEEVTGVQ 178
Score = 96.4 bits (204), Expect(2) = 3e-043
Identities = 38/50 (76%), Positives = 43/50 (86%)
Frame = +3 / +2
Query: 609 GCALVDADAFPRFHAWLRDFEALDEVRETIPAVDRLLEYARGLRHMLLGL 758
G LVDA+AFP FHAWLRDFE DEVRETIP++DRLLEYARGLR ML+ +
Sbjct: 170 GVQLVDAEAFPLFHAWLRDFEGQDEVRETIPSIDRLLEYARGLRQMLVAM 319
>gb|BQ470714.1|BQ470714 HX03M23r HX Hordeum vulgare subsp. vulgare cDNA clone HX03M23
5-PRIME, mRNA sequence
Length = 417
Score = 100 bits (212), Expect(2) = 3e-043
Identities = 42/56 (75%), Positives = 46/56 (82%)
Frame = +2 / +2
Query: 449 AVRQVHENLALIESELRDGAXXXXXXXXXDEVGLLDVVLGCGSYWLAVFEEVTGVR 616
AVRQVHENLAL+E+ELR+GA DEVG LDVVLGCGSYWLAVFEEVTGV+
Sbjct: 11 AVRQVHENLALLEAELREGAFKGRRFFGGDEVGFLDVVLGCGSYWLAVFEEVTGVQ 178
Score = 96.4 bits (204), Expect(2) = 3e-043
Identities = 38/50 (76%), Positives = 43/50 (86%)
Frame = +3 / +2
Query: 609 GCALVDADAFPRFHAWLRDFEALDEVRETIPAVDRLLEYARGLRHMLLGL 758
G LVDA+AFP FHAWLRDFE DEVRETIP++DRLLEYARGLR ML+ +
Sbjct: 170 GVQLVDAEAFPLFHAWLRDFEGQDEVRETIPSIDRLLEYARGLRQMLVAM 319
>gb|BF258539.2|BF258539 HVSMEf0016A04f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEf0016A04f, mRNA sequence
Length = 854
Score = 162 bits (349), Expect(2) = 8e-041
Identities = 64/141 (45%), Positives = 95/141 (67%)
Frame = +2 / +1
Query: 83 ASPLMLFGSWASSYTHRVQLALRLKGLEFDYVEEDLGNKSDELLRHNPVHKKVPVLVHGG 262
+ P+ L G+ S HR +LALRLKG+ ++ +EEDL NKS+ LL HNPVHK VPVL+HG
Sbjct: 19 SEPVRLIGACGSPVVHRAELALRLKGVPYELIEEDLNNKSELLLTHNPVHKTVPVLLHGH 198
Query: 263 RALPESVIILQYLDDAWPETRPLLPADAFDRALARFWCHFADDKLGPAVGTVFASTGEDQ 442
R++P+S++I++Y+D+A+P PLLP D RA ARFW F ++K + + GE
Sbjct: 199 RSIPDSLVIVEYIDEAFPGGPPLLPVDPLARANARFWARFLEEKFKKPLWIALWTDGEAH 378
Query: 443 EAAVRQVHENLALIESELRDG 505
A+ ++ NL L+E++L +G
Sbjct: 379 AASAKETKANLTLLEAQLPEG 441
Score = 25.4 bits (49), Expect(2) = 8e-041
Identities = 9/19 (47%), Positives = 13/19 (68%)
Frame = +2 / +1
Query: 560 VLGCGSYWLAVFEEVTGVR 616
V G ++W+ V EE+ GVR
Sbjct: 487 VRGALAHWMGVVEEMAGVR 543
>gb|BF253803.2|BF253803 HVSMEf0002C17f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEf0002C17f, mRNA sequence
Length = 809
Score = 166 bits (358), Expect = 2e-040
Identities = 66/147 (44%), Positives = 100/147 (68%)
Frame = +2 / +2
Query: 65 SAIPPAASPLMLFGSWASSYTHRVQLALRLKGLEFDYVEEDLGNKSDELLRHNPVHKKVP 244
+A ++ P+ L G++ S HR +LALRLKG+ ++ +EEDL NKS+ LL HNPVHK VP
Sbjct: 20 NAAAMSSEPVRLIGAFGSPVVHRAELALRLKGVPYELIEEDLDNKSELLLTHNPVHKTVP 199
Query: 245 VLVHGGRALPESVIILQYLDDAWPETRPLLPADAFDRALARFWCHFADDKLGPAVGTVFA 424
VL+HG R++P+S++I++Y+D+A+P PLLP D RA ARFW F ++K +
Sbjct: 200 VLLHGHRSIPDSLVIVEYIDEAFPGGPPLLPVDPLARANARFWARFLEEKFKKPLWIALW 379
Query: 425 STGEDQEAAVRQVHENLALIESELRDG 505
+ GE Q A+ ++ NL L+E++L +G
Sbjct: 380 TDGEAQAASAKETKANLTLLEAQLPEG 460
>gb|BF065573.1|BF065573 HV_CEb0012M23f Hordeum vulgare seedling green leaf EST library
HVcDNA0005 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEb0012M23f, mRNA sequence
Length = 581
Score = 116 bits (249), Expect(4) = 1e-039
Identities = 44/78 (56%), Positives = 62/78 (79%)
Frame = +2 / +1
Query: 80 AASPLMLFGSWASSYTHRVQLALRLKGLEFDYVEEDLGNKSDELLRHNPVHKKVPVLVHG 259
A + LFG WAS Y +V+ AL +KG+E+DY+EEDL NKSD+LL HNPVHKKVPVL++
Sbjct: 16 AREKVKLFGMWASPYVLKVKWALSIKGVEYDYLEEDLRNKSDDLLEHNPVHKKVPVLLYH 195
Query: 260 GRALPESVIILQYLDDAW 313
G+ + ES +I++++D+AW
Sbjct: 196 GKPVAESDVIVEFVDEAW 249
Score = 44.6 bits (91), Expect(4) = 1e-039
Identities = 17/43 (39%), Positives = 24/43 (55%)
Frame = +2 / +1
Query: 329 LLPADAFDRALARFWCHFADDKLGPAVGTVFASTGEDQEAAVR 457
+LP D + RA+ARFW F DKL A+ F + + + A R
Sbjct: 268 ILPGDPYKRAMARFWVRFVHDKLSTAIWKWFTTAPGEDQEAAR 396
Score = 36.3 bits (73), Expect(4) = 1e-039
Identities = 13/27 (48%), Positives = 21/27 (77%)
Frame = +2 / +3
Query: 536 DEVGLLDVVLGCGSYWLAVFEEVTGVR 616
+ VGL+D+VLG +Y + ++EE+ GVR
Sbjct: 468 ESVGLVDLVLGAKAYVVPMYEEIVGVR 548
Score = 22.1 bits (42), Expect(4) = 1e-039
Identities = 11/22 (50%), Positives = 13/22 (59%)
Frame = +2 / +1
Query: 431 GEDQEAAVRQVHENLALIESEL 496
GEDQEAA E L ++E L
Sbjct: 373 GEDQEAARGAFVEQLQVLEELL 438
>gb|BQ763153.1|BQ763153 EBro02_SQ007_K08_R root, 3 week, hydroponic grown, low nitrogen, cv
Optic, EBro02 Hordeum vulgare subsp. vulgare cDNA clone
EBro02_SQ007_K08 5', mRNA sequence
Length = 614
Score = 163 bits (350), Expect = 2e-039
Identities = 65/139 (46%), Positives = 95/139 (68%)
Frame = +2 / +3
Query: 89 PLMLFGSWASSYTHRVQLALRLKGLEFDYVEEDLGNKSDELLRHNPVHKKVPVLVHGGRA 268
P+ L G + S HR +LALRLKG+ ++ + EDL NKS+ LL HNPVHK VPVL+HG R+
Sbjct: 18 PVRLIGCFGSPVVHRAELALRLKGVPYELILEDLNNKSELLLTHNPVHKTVPVLLHGHRS 197
Query: 269 LPESVIILQYLDDAWPETRPLLPADAFDRALARFWCHFADDKLGPAVGTVFASTGEDQEA 448
+PES++I++Y+D+A+P PLLP+D RA ARFW F ++K + + GE Q A
Sbjct: 198 IPESLVIVEYVDEAFPAGPPLLPSDPLARANARFWARFLEEKFKKPLWIALWTDGEAQAA 377
Query: 449 AVRQVHENLALIESELRDG 505
+ ++ NL L+E++L +G
Sbjct: 378 SAKETKANLTLLEAQLPEG 434
>gb|BQ766637.1|BQ766637 EBro08_SQ006_N18_R root, 3 week, drought-stressed, cv Optic, EBro08
Hordeum vulgare subsp. vulgare cDNA clone
EBro08_SQ006_N18 5', mRNA sequence
Length = 504
Score = 163 bits (350), Expect = 2e-039
Identities = 65/139 (46%), Positives = 95/139 (68%)
Frame = +2 / +3
Query: 89 PLMLFGSWASSYTHRVQLALRLKGLEFDYVEEDLGNKSDELLRHNPVHKKVPVLVHGGRA 268
P+ L G + S HR +LALRLKG+ ++ + EDL NKS+ LL HNPVHK VPVL+HG R+
Sbjct: 12 PVRLIGCFGSPVVHRAELALRLKGVPYELILEDLNNKSELLLTHNPVHKTVPVLLHGHRS 191
Query: 269 LPESVIILQYLDDAWPETRPLLPADAFDRALARFWCHFADDKLGPAVGTVFASTGEDQEA 448
+PES++I++Y+D+A+P PLLP+D RA ARFW F ++K + + GE Q A
Sbjct: 192 IPESLVIVEYVDEAFPAGPPLLPSDPLARANARFWARFLEEKFKKPLWIALWTDGEAQAA 371
Query: 449 AVRQVHENLALIESELRDG 505
+ ++ NL L+E++L +G
Sbjct: 372 SAKETKANLTLLEAQLPEG 428
>gb|BF065944.1|BF065944 HV_CEb0014G19f Hordeum vulgare seedling green leaf EST library
HVcDNA0005 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEb0014G19f, mRNA sequence
Length = 821
Score = 115 bits (245), Expect(4) = 4e-039
Identities = 43/78 (55%), Positives = 62/78 (79%)
Frame = +2 / +1
Query: 80 AASPLMLFGSWASSYTHRVQLALRLKGLEFDYVEEDLGNKSDELLRHNPVHKKVPVLVHG 259
A + LFG WAS Y +V+ AL +KG+E++Y+EEDL NKSD+LL HNPVHKKVPVL++
Sbjct: 16 AREKVKLFGMWASPYVLKVKWALSIKGVEYEYLEEDLRNKSDDLLEHNPVHKKVPVLLYH 195
Query: 260 GRALPESVIILQYLDDAW 313
G+ + ES +I++++D+AW
Sbjct: 196 GKPVAESDVIVEFVDEAW 249
Score = 47.3 bits (97), Expect(4) = 4e-039
Identities = 17/43 (39%), Positives = 25/43 (58%)
Frame = +2 / +1
Query: 329 LLPADAFDRALARFWCHFADDKLGPAVGTVFASTGEDQEAAVR 457
+LP D ++RA+ARFW F DKL P + F + + + A R
Sbjct: 268 ILPGDPYERAMARFWVRFVHDKLSPPIWKWFTTAPGEDQEAAR 396
Score = 33.1 bits (66), Expect(4) = 4e-039
Identities = 12/27 (44%), Positives = 20/27 (74%)
Frame = +2 / +1
Query: 536 DEVGLLDVVLGCGSYWLAVFEEVTGVR 616
+ VGL+D+ LG +Y + ++EE+ GVR
Sbjct: 469 ESVGLVDLSLGAMAYVVPMYEEIVGVR 549
Score = 22.6 bits (43), Expect(4) = 4e-039
Identities = 12/25 (48%), Positives = 14/25 (56%)
Frame = +2 / +1
Query: 431 GEDQEAAVRQVHENLALIESELRDG 505
GEDQEAA E L ++E L G
Sbjct: 373 GEDQEAARGASVEQLQVLEELLAVG 447
>gb|BF065968.1|BF065968 HV_CEb0014H19f Hordeum vulgare seedling green leaf EST library
HVcDNA0005 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEb0014H19f, mRNA sequence
Length = 821
Score = 115 bits (245), Expect(4) = 4e-039
Identities = 43/78 (55%), Positives = 62/78 (79%)
Frame = +2 / +1
Query: 80 AASPLMLFGSWASSYTHRVQLALRLKGLEFDYVEEDLGNKSDELLRHNPVHKKVPVLVHG 259
A + LFG WAS Y +V+ AL +KG+E++Y+EEDL NKSD+LL HNPVHKKVPVL++
Sbjct: 16 AREKVKLFGMWASPYVLKVKWALSIKGVEYEYLEEDLRNKSDDLLEHNPVHKKVPVLLYH 195
Query: 260 GRALPESVIILQYLDDAW 313
G+ + ES +I++++D+AW
Sbjct: 196 GKPVAESDVIVEFVDEAW 249
Score = 47.3 bits (97), Expect(4) = 4e-039
Identities = 17/43 (39%), Positives = 25/43 (58%)
Frame = +2 / +1
Query: 329 LLPADAFDRALARFWCHFADDKLGPAVGTVFASTGEDQEAAVR 457
+LP D ++RA+ARFW F DKL P + F + + + A R
Sbjct: 268 ILPGDPYERAMARFWVRFVHDKLSPPIWKWFTTAPGEDQEAAR 396
Score = 33.1 bits (66), Expect(4) = 4e-039
Identities = 12/27 (44%), Positives = 20/27 (74%)
Frame = +2 / +1
Query: 536 DEVGLLDVVLGCGSYWLAVFEEVTGVR 616
+ VGL+D+ LG +Y + ++EE+ GVR
Sbjct: 469 ESVGLVDLSLGAMAYVVPMYEEIVGVR 549
Score = 22.6 bits (43), Expect(4) = 4e-039
Identities = 12/25 (48%), Positives = 14/25 (56%)
Frame = +2 / +1
Query: 431 GEDQEAAVRQVHENLALIESELRDG 505
GEDQEAA E L ++E L G
Sbjct: 373 GEDQEAARGASVEQLQVLEELLAVG 447
>gb|BF266117.2|BF266117 HV_CEa0014D16f Hordeum vulgare seedling green leaf EST library
HVcDNA0004 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEa0014D16f, mRNA sequence
Length = 573
Score = 114 bits (243), Expect(4) = 5e-039
Identities = 42/72 (58%), Positives = 60/72 (83%)
Frame = +2 / +3
Query: 98 LFGSWASSYTHRVQLALRLKGLEFDYVEEDLGNKSDELLRHNPVHKKVPVLVHGGRALPE 277
LFG WAS Y +V+ AL +KG+E++Y+EEDL NKSD+LL HNPVHKKVPVL++ G+ + E
Sbjct: 24 LFGMWASPYVLKVKWALSIKGVEYEYLEEDLRNKSDDLLEHNPVHKKVPVLLYHGKPVAE 203
Query: 278 SVIILQYLDDAW 313
S +I++++D+AW
Sbjct: 204 SDVIVEFVDEAW 239
Score = 47.3 bits (97), Expect(4) = 5e-039
Identities = 17/43 (39%), Positives = 25/43 (58%)
Frame = +2 / +3
Query: 329 LLPADAFDRALARFWCHFADDKLGPAVGTVFASTGEDQEAAVR 457
+LP D ++RA+ARFW F DKL P + F + + + A R
Sbjct: 258 ILPGDPYERAMARFWVRFVHDKLSPPIWKWFTTAPGEDQEAAR 386
Score = 33.1 bits (66), Expect(4) = 5e-039
Identities = 12/27 (44%), Positives = 20/27 (74%)
Frame = +2 / +3
Query: 536 DEVGLLDVVLGCGSYWLAVFEEVTGVR 616
+ VGL+D+ LG +Y + ++EE+ GVR
Sbjct: 459 ESVGLVDLSLGAMAYVVPMYEEIVGVR 539
Score = 23.1 bits (44), Expect(4) = 5e-039
Identities = 12/25 (48%), Positives = 14/25 (56%)
Frame = +2 / +3
Query: 431 GEDQEAAVRQVHENLALIESELRDG 505
GEDQEAA E L ++E L G
Sbjct: 363 GEDQEAARGAXVEQLQVLEELLAVG 437
>gb|BE559055.2|BE559055 HV_CEb0022I16f Hordeum vulgare seedling green leaf EST library
HVcDNA0005 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEb0022I16f, mRNA sequence
Length = 670
Score = 114 bits (243), Expect(4) = 7e-039
Identities = 42/72 (58%), Positives = 60/72 (83%)
Frame = +2 / +2
Query: 98 LFGSWASSYTHRVQLALRLKGLEFDYVEEDLGNKSDELLRHNPVHKKVPVLVHGGRALPE 277
LFG WAS Y +V+ AL +KG+E++Y+EEDL NKSD+LL HNPVHKKVPVL++ G+ + E
Sbjct: 11 LFGMWASPYVLKVKWALSIKGVEYEYLEEDLRNKSDDLLEHNPVHKKVPVLLYHGKPVAE 190
Query: 278 SVIILQYLDDAW 313
S +I++++D+AW
Sbjct: 191 SDVIVEFVDEAW 226
Score = 47.3 bits (97), Expect(4) = 7e-039
Identities = 17/43 (39%), Positives = 25/43 (58%)
Frame = +2 / +2
Query: 329 LLPADAFDRALARFWCHFADDKLGPAVGTVFASTGEDQEAAVR 457
+LP D ++RA+ARFW F DKL P + F + + + A R
Sbjct: 245 ILPGDPYERAMARFWVRFVHDKLSPPIWKWFTTAPGEDQEAAR 373
Score = 33.1 bits (66), Expect(4) = 7e-039
Identities = 12/27 (44%), Positives = 20/27 (74%)
Frame = +2 / +2
Query: 536 DEVGLLDVVLGCGSYWLAVFEEVTGVR 616
+ VGL+D+ LG +Y + ++EE+ GVR
Sbjct: 446 ESVGLVDLSLGAMAYVVPMYEEIVGVR 526
Score = 22.6 bits (43), Expect(4) = 7e-039
Identities = 12/25 (48%), Positives = 14/25 (56%)
Frame = +2 / +2
Query: 431 GEDQEAAVRQVHENLALIESELRDG 505
GEDQEAA E L ++E L G
Sbjct: 350 GEDQEAARGASVEQLQVLEELLAVG 424
>gb|BF267384.2|BF267384 HV_CEa0017M06f Hordeum vulgare seedling green leaf EST library
HVcDNA0004 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEa0017M06f, mRNA sequence
Length = 843
Score = 114 bits (243), Expect(4) = 9e-039
Identities = 42/72 (58%), Positives = 60/72 (83%)
Frame = +2 / +3
Query: 98 LFGSWASSYTHRVQLALRLKGLEFDYVEEDLGNKSDELLRHNPVHKKVPVLVHGGRALPE 277
LFG WAS Y +V+ AL +KG+E++Y+EEDL NKSD+LL HNPVHKKVPVL++ G+ + E
Sbjct: 15 LFGMWASPYVLKVKWALSIKGVEYEYLEEDLRNKSDDLLEHNPVHKKVPVLLYHGKPVAE 194
Query: 278 SVIILQYLDDAW 313
S +I++++D+AW
Sbjct: 195 SDVIVEFVDEAW 230
Score = 47.3 bits (97), Expect(4) = 9e-039
Identities = 17/43 (39%), Positives = 25/43 (58%)
Frame = +2 / +3
Query: 329 LLPADAFDRALARFWCHFADDKLGPAVGTVFASTGEDQEAAVR 457
+LP D ++RA+ARFW F DKL P + F + + + A R
Sbjct: 249 ILPGDPYERAMARFWVRFVHDKLSPPIWKWFTTAPGEDQEAAR 377
Score = 32.7 bits (65), Expect(4) = 9e-039
Identities = 12/28 (42%), Positives = 21/28 (75%)
Frame = +2 / +3
Query: 536 DEVGLLDVVLGCGSYWLAVFEEVTGVRS 619
+ VGL+D+ LG +Y + ++EE+ GVR+
Sbjct: 450 ESVGLVDLSLGAMAYVVPMYEEIGGVRA 533
Score = 22.6 bits (43), Expect(4) = 9e-039
Identities = 12/25 (48%), Positives = 14/25 (56%)
Frame = +2 / +3
Query: 431 GEDQEAAVRQVHENLALIESELRDG 505
GEDQEAA E L ++E L G
Sbjct: 354 GEDQEAARGASVEQLQVLEELLAVG 428
>gb|BE216520.1|BE216520 HV_CEb0010L11f Hordeum vulgare seedling green leaf EST library
HVcDNA0005 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEb0010L11f, mRNA sequence
Length = 909
Score = 114 bits (243), Expect(4) = 1e-038
Identities = 42/72 (58%), Positives = 60/72 (83%)
Frame = +2 / +3
Query: 98 LFGSWASSYTHRVQLALRLKGLEFDYVEEDLGNKSDELLRHNPVHKKVPVLVHGGRALPE 277
LFG WAS Y +V+ AL +KG+E++Y+EEDL NKSD+LL HNPVHKKVPVL++ G+ + E
Sbjct: 33 LFGMWASPYVLKVKWALSIKGVEYEYLEEDLRNKSDDLLEHNPVHKKVPVLLYHGKPVAE 212
Query: 278 SVIILQYLDDAW 313
S +I++++D+AW
Sbjct: 213 SDVIVEFVDEAW 248
Score = 47.3 bits (97), Expect(4) = 1e-038
Identities = 17/43 (39%), Positives = 25/43 (58%)
Frame = +2 / +3
Query: 329 LLPADAFDRALARFWCHFADDKLGPAVGTVFASTGEDQEAAVR 457
+LP D ++RA+ARFW F DKL P + F + + + A R
Sbjct: 267 ILPGDPYERAMARFWVRFVHDKLSPPIWKWFTTAPGEDQEAAR 395
Score = 32.2 bits (64), Expect(4) = 1e-038
Identities = 12/27 (44%), Positives = 20/27 (74%)
Frame = +2 / +3
Query: 536 DEVGLLDVVLGCGSYWLAVFEEVTGVR 616
+ VGL+D+ LG +Y + ++EE+ GVR
Sbjct: 468 ESVGLVDLSLGAMAYVVPMYEEIGGVR 548
Score = 22.6 bits (43), Expect(4) = 1e-038
Identities = 12/25 (48%), Positives = 14/25 (56%)
Frame = +2 / +3
Query: 431 GEDQEAAVRQVHENLALIESELRDG 505
GEDQEAA E L ++E L G
Sbjct: 372 GEDQEAARGASVEQLQVLEELLAVG 446
>gb|AL503324.1|AL503324 AL503324 Hordeum vulgare Barke roots Hordeum vulgare subsp. vulgare
cDNA clone HW01K08T 5', mRNA sequence
Length = 700
Score = 119 bits (254), Expect(4) = 4e-038
Identities = 52/81 (64%), Positives = 62/81 (76%)
Frame = +2 / +2
Query: 92 LMLFGSWASSYTHRVQLALRLKGLEFDYVEEDLGNKSDELLRHNPVHKKVPVLVHGGRAL 271
L L G+WAS + RV+LAL LKGL F+ VEEDLGNKS+ LL NPVHKKVPVLVH G+ +
Sbjct: 62 LKLLGAWASPFVTRVKLALSLKGLSFEDVEEDLGNKSELLLSSNPVHKKVPVLVHNGKPV 241
Query: 272 PESVIILQYLDDAWPETRPLL 334
ESVIILQY+D+A+ P L
Sbjct: 242 CESVIILQYIDEAFAGIGPSL 304
Score = 40.0 bits (81), Expect(4) = 4e-038
Identities = 14/23 (60%), Positives = 18/23 (78%)
Frame = +2 / +2
Query: 329 LLPADAFDRALARFWCHFADDKL 397
LLP+D + RA+ARFW + DDKL
Sbjct: 302 LLPSDPYQRAVARFWAAYIDDKL 370
Score = 35.9 bits (72), Expect(4) = 4e-038
Identities = 14/40 (35%), Positives = 21/40 (52%)
Frame = +3 / +2
Query: 609 GCALVDADAFPRFHAWLRDFEALDEVRETIPAVDRLLEYA 728
G + D P AW+ F LD + +P VDR++E+A
Sbjct: 581 GTKIFDPVKTPLLAAWMDRFSELDAAKAALPEVDRVVEFA 700
Score = 25.4 bits (49), Expect(4) = 4e-038
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = +2 / +2
Query: 536 DEVGLLDVVLGCGSYWLAVFEEVTGVR 616
+ VGL+DV LG WL E ++G +
Sbjct: 509 ETVGLVDVSLGSLLSWLNATEVMSGTK 589
>gb|CA030735.1|CA030735 HX07P10r HX Hordeum vulgare subsp. vulgare cDNA clone HX07P10
5-PRIME, mRNA sequence
Length = 588
Score = 96.4 bits (204), Expect(3) = 6e-038
Identities = 38/50 (76%), Positives = 43/50 (86%)
Frame = +3 / +2
Query: 609 GCALVDADAFPRFHAWLRDFEALDEVRETIPAVDRLLEYARGLRHMLLGL 758
G LVDA+AFP FHAWLRDFE DEVRETIP++DRLLEYARGLR ML+ +
Sbjct: 164 GVQLVDAEAFPLFHAWLRDFEGQDEVRETIPSIDRLLEYARGLRQMLVAM 313
Score = 64.3 bits (134), Expect(3) = 6e-038
Identities = 25/27 (92%), Positives = 26/27 (96%)
Frame = +2 / +2
Query: 536 DEVGLLDVVLGCGSYWLAVFEEVTGVR 616
DEVG LDVVLGCGSYWLAVFEEVTGV+
Sbjct: 92 DEVGFLDVVLGCGSYWLAVFEEVTGVQ 172
Score = 35.9 bits (72), Expect(3) = 6e-038
Identities = 14/18 (77%), Positives = 17/18 (94%)
Frame = +2 / +3
Query: 455 RQVHENLALIESELRDGA 508
R VHENLAL+E+ELR+GA
Sbjct: 12 RGVHENLALLEAELREGA 65
>gb|CA030427.1|CA030427 HX07A15r HX Hordeum vulgare subsp. vulgare cDNA clone HX07A15
5-PRIME, mRNA sequence
Length = 504
Score = 96.4 bits (204), Expect(3) = 6e-038
Identities = 38/50 (76%), Positives = 43/50 (86%)
Frame = +3 / +1
Query: 609 GCALVDADAFPRFHAWLRDFEALDEVRETIPAVDRLLEYARGLRHMLLGL 758
G LVDA+AFP FHAWLRDFE DEVRETIP++DRLLEYARGLR ML+ +
Sbjct: 157 GVQLVDAEAFPLFHAWLRDFEGQDEVRETIPSIDRLLEYARGLRQMLVAM 306
Score = 64.3 bits (134), Expect(3) = 6e-038
Identities = 25/27 (92%), Positives = 26/27 (96%)
Frame = +2 / +1
Query: 536 DEVGLLDVVLGCGSYWLAVFEEVTGVR 616
DEVG LDVVLGCGSYWLAVFEEVTGV+
Sbjct: 85 DEVGFLDVVLGCGSYWLAVFEEVTGVQ 165
Score = 35.9 bits (72), Expect(3) = 6e-038
Identities = 14/18 (77%), Positives = 17/18 (94%)
Frame = +2 / +2
Query: 455 RQVHENLALIESELRDGA 508
R VHENLAL+E+ELR+GA
Sbjct: 5 RGVHENLALLEAELREGA 58
>gb|BF260718.2|BF260718 HVSMEf0022M04f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEf0022M04f, mRNA sequence
Length = 841
Score = 157 bits (338), Expect = 1e-037
Identities = 69/139 (49%), Positives = 89/139 (64%)
Frame = +2 / +2
Query: 80 AASPLMLFGSWASSYTHRVQLALRLKGLEFDYVEEDLGNKSDELLRHNPVHKKVPVLVHG 259
A + +FG WAS RV+ ALRLKG+ + YV+EDL +KSD LLR NPV KKVPVLVH
Sbjct: 17 AEKGVKVFGMWASPMVMRVEWALRLKGVVY*YVDEDLASKSDALLRRNPVTKKVPVLVHD 196
Query: 260 GRALPESVIILQYLDDAWPETRPLLPADAFDRALARFWCHFADDKLGPAVGTVFASTGED 439
G + ES II++Y+D+AW + P++P D DRA ARFW FADDK A+ VF TG+
Sbjct: 197 G*PIVESTIIVEYIDEAWKDGYPIMPDDPHDRAHARFWAMFADDKCNAAIYPVFTVTGKA 376
Query: 440 QEAAVRQVHENLALIESEL 496
V + L +E+ L
Sbjct: 377 HREVVLEAQRCLKTLETGL 433
>gb|AL450842.1|AL450842 AL450842 Hordeum vulgare Barke etiolated leaves Hordeum vulgare
subsp. vulgare cDNA clone HK04H17u 5', mRNA sequence
Length = 700
Score = 108 bits (230), Expect(4) = 5e-037
Identities = 42/77 (54%), Positives = 61/77 (79%)
Frame = +2 / +3
Query: 83 ASPLMLFGSWASSYTHRVQLALRLKGLEFDYVEEDLGNKSDELLRHNPVHKKVPVLVHGG 262
A P+ L + S + HRV+ ALRLKG+ ++ V EDL +KSD LL+HNP+H+KVPVLVHG
Sbjct: 27 AEPVKLIATLGSPFVHRVEAALRLKGVPYELVLEDLQSKSDLLLKHNPIHQKVPVLVHGD 206
Query: 263 RALPESVIILQYLDDAW 313
RA+ ES++I++Y+D+A+
Sbjct: 207 RAICESLLIMEYVDEAF 257
Score = 39.1 bits (79), Expect(4) = 5e-037
Identities = 13/22 (59%), Positives = 17/22 (77%)
Frame = +2 / +3
Query: 329 LLPADAFDRALARFWCHFADDK 394
LLP+D +DRA+ARFW F + K
Sbjct: 270 LLPSDPYDRAMARFWAQFLEQK 335
Score = 34.1 bits (68), Expect(4) = 5e-037
Identities = 13/26 (50%), Positives = 17/26 (65%)
Frame = +2 / +3
Query: 536 DEVGLLDVVLGCGSYWLAVFEEVTGV 613
D +G LDV ++W+ FEEVTGV
Sbjct: 465 DSIGYLDVAACGPAHWIYAFEEVTGV 542
Score = 29.5 bits (58), Expect(4) = 5e-037
Identities = 10/23 (43%), Positives = 18/23 (78%)
Frame = +2 / +3
Query: 431 GEDQEAAVRQVHENLALIESELR 499
GE+Q+ +++ ENLAL+E +L+
Sbjct: 375 GEEQKGFAKEMKENLALLEGQLQ 443
>gb|BF621550.2|BF621550 HVSMEa0011F24f Hordeum vulgare seedling shoot EST library
HVcDNA0001 (Cold stress) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEa0011F24f, mRNA sequence
Length = 808
Score = 119 bits (254), Expect(4) = 5e-037
Identities = 52/81 (64%), Positives = 62/81 (76%)
Frame = +2 / +2
Query: 92 LMLFGSWASSYTHRVQLALRLKGLEFDYVEEDLGNKSDELLRHNPVHKKVPVLVHGGRAL 271
L L G+WAS + RV+LAL LKGL F+ VEEDLGNKS+ LL NPVHKKVPVLVH G+ +
Sbjct: 80 LKLLGAWASPFVTRVKLALSLKGLSFEDVEEDLGNKSELLLSSNPVHKKVPVLVHNGKPV 259
Query: 272 PESVIILQYLDDAWPETRPLL 334
ESVIILQY+D+A+ P L
Sbjct: 260 CESVIILQYIDEAFAGIGPSL 322
Score = 40.0 bits (81), Expect(4) = 5e-037
Identities = 14/23 (60%), Positives = 18/23 (78%)
Frame = +2 / +2
Query: 329 LLPADAFDRALARFWCHFADDKL 397
LLP+D + RA+ARFW + DDKL
Sbjct: 320 LLPSDPYQRAVARFWAAYIDDKL 388
Score = 32.7 bits (65), Expect(4) = 5e-037
Identities = 13/40 (32%), Positives = 20/40 (50%)
Frame = +3 / +2
Query: 609 GCALVDADAFPRFHAWLRDFEALDEVRETIPAVDRLLEYA 728
G + D P AW+ LD + +P VDR++E+A
Sbjct: 599 GTKIFDPVKTPLLAAWMDRXSELDAAKAALPEVDRVVEFA 718
Score = 25.4 bits (49), Expect(4) = 5e-037
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = +2 / +2
Query: 536 DEVGLLDVVLGCGSYWLAVFEEVTGVR 616
+ VGL+DV LG WL E ++G +
Sbjct: 527 ETVGLVDVSLGSLLSWLNATEVMSGTK 607
>gb|BF260845.2|BF260845 HVSMEf0023B13f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEf0023B13f, mRNA sequence
Length = 818
Score = 153 bits (329), Expect = 2e-036
Identities = 63/142 (44%), Positives = 92/142 (64%)
Frame = +2 / +1
Query: 77 PAASPLMLFGSWASSYTHRVQLALRLKGLEFDYVEEDLGNKSDELLRHNPVHKKVPVLVH 256
P + ++L WAS + R ++AL KG+ ++Y E+DL KS+ LLR NPVHKK+PVL+H
Sbjct: 31 PTMADVVLLDFWASPFGQRCRIALAEKGVAYEYCEQDLEQKSELLLRSNPVHKKIPVLLH 210
Query: 257 GGRALPESVIILQYLDDAWPETRPLLPADAFDRALARFWCHFADDKLGPAVGTVFASTGE 436
GR + ES+IIL Y+D+AWPE PLLP D + RA A+FW + D+K+ + + G+
Sbjct: 211 DGRPVCESLIILSYIDEAWPEVAPLLPRDPYARAQAQFWADYIDNKIVDCQTRLLTTKGD 390
Query: 437 DQEAAVRQVHENLALIESELRD 502
QE A + + L +E+EL D
Sbjct: 391 AQEQAKKDMIGALETLEAELGD 456
>gb|BM442923.2|BM442923 EBro02_SQ001_N17_R root, 3 week, hydroponic grown, low nitrogen, cv
Optic, EBro02 Hordeum vulgare subsp. vulgare cDNA clone
EBro02_SQ001_N17 5', mRNA sequence
Length = 440
Score = 153 bits (328), Expect = 2e-036
Identities = 62/139 (44%), Positives = 91/139 (65%)
Frame = +2 / +1
Query: 65 SAIPPAASPLMLFGSWASSYTHRVQLALRLKGLEFDYVEEDLGNKSDELLRHNPVHKKVP 244
+A ++ P+ L G++ S HR +LALRLKG+ ++ +EEDL NKS+ LL HNPVHK VP
Sbjct: 22 NAAAMSSQPVRLIGAFGSPVVHRAELALRLKGVPYELIEEDLNNKSELLLTHNPVHKTVP 201
Query: 245 VLVHGGRALPESVIILQYLDDAWPETRPLLPADAFDRALARFWCHFADDKLGPAVGTVFA 424
VL+HG R++P+S++I++Y+D+A+P PLLP D RA ARFW F +++ +
Sbjct: 202 VLLHGHRSIPDSLVIVEYIDEAFPGGPPLLPVDPLARANARFWARFLEEECKKPLWIALW 381
Query: 425 STGEDQEAAVRQVHENLAL 481
+ GE A R+ E L L
Sbjct: 382 ADGEAXVRAARETKEKLTL 438
>gb|AL504140.1|AL504140 AL504140 Hordeum vulgare Barke roots Hordeum vulgare subsp. vulgare
cDNA clone HW04F05V 5', mRNA sequence
Length = 700
Score = 133 bits (284), Expect(3) = 3e-036
Identities = 54/117 (46%), Positives = 78/117 (66%)
Frame = +2 / +1
Query: 98 LFGSWASSYTHRVQLALRLKGLEFDYVEEDLGNKSDELLRHNPVHKKVPVLVHGGRALPE 277
L GS S + RV++AL KG+ ++Y+E+DL +K D LL NPVH KVPVL+H GR + E
Sbjct: 103 LLGSVMSPFAVRVRMALHAKGVSYEYLEQDLFHKGDLLLASNPVHNKVPVLIHAGRPVCE 282
Query: 278 SVIILQYLDDAWPETRPLLPADAFDRALARFWCHFADDKLGPAVGTVFASTGEDQEA 448
S+ I++Y+++ W + LLPAD + RA+ARFW + DDKL PA + + E+ A
Sbjct: 283 SLAIVEYVNEVWADGASLLPADPYGRAVARFWAAYVDDKLFPAWLGILRAATEEDRA 453
Score = 35.0 bits (70), Expect(3) = 3e-036
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = +2 / +1
Query: 536 DEVGLLDVVLGCGSYWLAVFEEVTGV 613
D VG LD+ LGC +W E+ GV
Sbjct: 541 DSVGYLDLALGCNLFWFKALREMFGV 618
Score = 22.6 bits (43), Expect(3) = 3e-036
Identities = 9/28 (32%), Positives = 13/28 (46%)
Frame = +3 / +1
Query: 609 GCALVDADAFPRFHAWLRDFEALDEVRE 692
G L+DA P AW F+ + +E
Sbjct: 613 GVTLIDAGRTPGLAAWAERFKQTEAGKE 696
>gb|BF065604.1|BF065604 HV_CEb0012O15f Hordeum vulgare seedling green leaf EST library
HVcDNA0005 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEb0012O15f, mRNA sequence
Length = 575
Score = 112 bits (240), Expect(3) = 3e-036
Identities = 43/78 (55%), Positives = 61/78 (78%)
Frame = +2 / +1
Query: 80 AASPLMLFGSWASSYTHRVQLALRLKGLEFDYVEEDLGNKSDELLRHNPVHKKVPVLVHG 259
A + LFG WAS Y RV+ AL +KG+E++ +EEDL NKSD+LL HNPVHKKVPVL++
Sbjct: 16 AREKVKLFGMWASPYVLRVKWALSIKGVEYELLEEDLRNKSDDLLEHNPVHKKVPVLLYH 195
Query: 260 GRALPESVIILQYLDDAW 313
G+ + ES +I++++D+AW
Sbjct: 196 GKPVAESDVIVEFVDEAW 249
Score = 49.6 bits (102), Expect(3) = 3e-036
Identities = 18/43 (41%), Positives = 26/43 (60%)
Frame = +2 / +1
Query: 329 LLPADAFDRALARFWCHFADDKLGPAVGTVFASTGEDQEAAVR 457
+LP D ++RA+ARFW F DKL PA+ F + + + A R
Sbjct: 268 ILPGDPYERAMARFWVRFVHDKLSPAIWKWFTTAPGEDQEAAR 396
Score = 28.1 bits (55), Expect(3) = 3e-036
Identities = 10/23 (43%), Positives = 17/23 (73%)
Frame = +2 / +3
Query: 548 LLDVVLGCGSYWLAVFEEVTGVR 616
L+D+ LG +Y + ++EE+ GVR
Sbjct: 480 LVDLSLGAKAYVVPMYEEIVGVR 548
>gb|CA022668.1|CA022668 HZ44A05r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ44A05
5-PRIME, mRNA sequence
Length = 588
Score = 141 bits (302), Expect(2) = 9e-036
Identities = 56/105 (53%), Positives = 75/105 (71%)
Frame = +2 / +1
Query: 92 LMLFGSWASSYTHRVQLALRLKGLEFDYVEEDLGNKSDELLRHNPVHKKVPVLVHGGRAL 271
L L G S + RV+LAL +KG+ ++Y+E D+ +K + LLR+NPVHKKVPVL+H G L
Sbjct: 43 LKLLGLMVSPFVTRVRLALHMKGVGYEYIETDVLDKGELLLRYNPVHKKVPVLIHNGVPL 222
Query: 272 PESVIILQYLDDAWPETRPLLPADAFDRALARFWCHFADDKLGPA 406
ES +I+QY+D+ WP P+LPAD + RA ARFW + DDKL PA
Sbjct: 223 CESQVIVQYVDEVWPAGAPILPADPYARATARFWAAYVDDKLFPA 357
Score = 32.7 bits (65), Expect(2) = 9e-036
Identities = 9/26 (34%), Positives = 15/26 (57%)
Frame = +2 / +1
Query: 536 DEVGLLDVVLGCGSYWLAVFEEVTGV 613
D +G LD+ +GC +W+ + GV
Sbjct: 493 DSIGFLDLAVGCNMFWMEALRRMFGV 570
>gb|BF253797.2|BF253797 HVSMEf0002C11f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEf0002C11f, mRNA sequence
Length = 824
Score = 148 bits (318), Expect = 6e-035
Identities = 59/126 (46%), Positives = 86/126 (68%)
Frame = +2 / +2
Query: 65 SAIPPAASPLMLFGSWASSYTHRVQLALRLKGLEFDYVEEDLGNKSDELLRHNPVHKKVP 244
+A ++ P+ L G++ S HR +LALRLKG+ ++ +EEDL NKS+ LL HNPVHK VP
Sbjct: 20 NAAAMSSEPVRLIGAFGSPVVHRAELALRLKGVPYELIEEDLDNKSELLLTHNPVHKTVP 199
Query: 245 VLVHGGRALPESVIILQYLDDAWPETRPLLPADAFDRALARFWCHFADDKLGPAVGTVFA 424
VL+HG R++P+S++I++Y+D+A+P PLLP D DRA AR W F ++K V
Sbjct: 200 VLLHGHRSIPDSLVIVKYIDEAFPGGPPLLPVDPLDRANARLWARFLEEKFKKPVWIALW 379
Query: 425 STGEDQ 442
+ G+ Q
Sbjct: 380 TDGKAQ 397
>gb|AV922724.1|AV922724 AV922724 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp.
vulgare cDNA clone basd2b17 5', mRNA sequence
Length = 648
Score = 99.1 bits (210), Expect(4) = 2e-034
Identities = 36/64 (56%), Positives = 54/64 (84%)
Frame = +2 / +1
Query: 122 YTHRVQLALRLKGLEFDYVEEDLGNKSDELLRHNPVHKKVPVLVHGGRALPESVIILQYL 301
Y +V+ AL +KG+E++Y+EEDL NKSD+LL HNPVHKKVPVL++ G+ + ES +I++++
Sbjct: 16 YVLKVKWALSIKGVEYEYLEEDLRNKSDDLLEHNPVHKKVPVLLYHGKPVAESDVIVEFV 195
Query: 302 DDAW 313
D+AW
Sbjct: 196 DEAW 207
Score = 47.3 bits (97), Expect(4) = 2e-034
Identities = 17/43 (39%), Positives = 25/43 (58%)
Frame = +2 / +1
Query: 329 LLPADAFDRALARFWCHFADDKLGPAVGTVFASTGEDQEAAVR 457
+LP D ++RA+ARFW F DKL P + F + + + A R
Sbjct: 226 ILPGDPYERAMARFWVRFVHDKLSPPIWKWFTTAPGEDQEAAR 354
Score = 33.1 bits (66), Expect(4) = 2e-034
Identities = 12/27 (44%), Positives = 20/27 (74%)
Frame = +2 / +1
Query: 536 DEVGLLDVVLGCGSYWLAVFEEVTGVR 616
+ VGL+D+ LG +Y + ++EE+ GVR
Sbjct: 427 ESVGLVDLSLGAMAYVVPMYEEIVGVR 507
Score = 22.6 bits (43), Expect(4) = 2e-034
Identities = 12/25 (48%), Positives = 14/25 (56%)
Frame = +2 / +1
Query: 431 GEDQEAAVRQVHENLALIESELRDG 505
GEDQEAA E L ++E L G
Sbjct: 331 GEDQEAARGASVEQLQVLEELLAVG 405
>gb|BE215757.1|BE215757 HV_CEb0008G14f Hordeum vulgare seedling green leaf EST library
HVcDNA0005 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEb0008G14f, mRNA sequence
Length = 507
Score = 114 bits (243), Expect(3) = 3e-034
Identities = 42/72 (58%), Positives = 60/72 (83%)
Frame = +2 / +3
Query: 98 LFGSWASSYTHRVQLALRLKGLEFDYVEEDLGNKSDELLRHNPVHKKVPVLVHGGRALPE 277
LFG WAS Y +V+ AL +KG+E++Y+EEDL NKSD+LL HNPVHKKVPVL++ G+ + E
Sbjct: 33 LFGMWASPYVLKVKWALSIKGVEYEYLEEDLRNKSDDLLEHNPVHKKVPVLLYHGKPVAE 212
Query: 278 SVIILQYLDDAW 313
S +I++++D+AW
Sbjct: 213 SDVIVEFVDEAW 248
Score = 47.3 bits (97), Expect(3) = 3e-034
Identities = 17/43 (39%), Positives = 25/43 (58%)
Frame = +2 / +3
Query: 329 LLPADAFDRALARFWCHFADDKLGPAVGTVFASTGEDQEAAVR 457
+LP D ++RA+ARFW F DKL P + F + + + A R
Sbjct: 267 ILPGDPYERAMARFWVRFVHDKLSPPIWKWFTTAPGEDQEAAR 395
Score = 22.6 bits (43), Expect(3) = 3e-034
Identities = 12/25 (48%), Positives = 14/25 (56%)
Frame = +2 / +3
Query: 431 GEDQEAAVRQVHENLALIESELRDG 505
GEDQEAA E L ++E L G
Sbjct: 372 GEDQEAARGASVEQLQVLEELLAVG 446
>gb|BG343645.1|BG343645 HVSMEg0006B22f Hordeum vulgare pre-anthesis spike EST library
HVcDNA0008 (white to yellow anther) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEg0006B22f, mRNA sequence
Length = 965
Score = 96.4 bits (204), Expect(2) = 3e-034
Identities = 38/50 (76%), Positives = 43/50 (86%)
Frame = +3 / +2
Query: 609 GCALVDADAFPRFHAWLRDFEALDEVRETIPAVDRLLEYARGLRHMLLGL 758
G LVDA+AFP FHAWLRDFE DEVRETIP++DRLLEYARGLR ML+ +
Sbjct: 116 GVQLVDAEAFPLFHAWLRDFEGQDEVRETIPSIDRLLEYARGLRQMLVAM 265
Score = 69.8 bits (146), Expect(2) = 3e-034
Identities = 29/41 (70%), Positives = 31/41 (75%)
Frame = +2 / +2
Query: 494 LRDGAXXXXXXXXXDEVGLLDVVLGCGSYWLAVFEEVTGVR 616
LR+GA DEVG LDVVLGCGSYWLAVFEEVTGV+
Sbjct: 2 LREGAFKGRRFFGGDEVGFLDVVLGCGSYWLAVFEEVTGVQ 124
>gb|BM817225.1|BM817225 HC109B04_T3.ab1 HC Hordeum vulgare subsp. vulgare cDNA clone
HC109B04_T3.ab1 similar to Glutathione
transferase,Glycoprotein-fucosylgalactoside
alpha-galactosyltransferase,, mRNA sequence
Length = 897
Score = 113 bits (241), Expect(3) = 4e-034
Identities = 46/79 (58%), Positives = 58/79 (73%)
Frame = +2 / +2
Query: 98 LFGSWASSYTHRVQLALRLKGLEFDYVEEDLGNKSDELLRHNPVHKKVPVLVHGGRALPE 277
L G WAS + R QLALRLKG+ ++YVEE+L NKSD LR NPVHK VPVL+H G+ + E
Sbjct: 122 LLGMWASPFVVRAQLALRLKGVNYEYVEEELANKSDLFLRSNPVHKTVPVLIHDGKPICE 301
Query: 278 SVIILQYLDDAWPETRPLL 334
S +ILQY+D+A+ P L
Sbjct: 302 SQVILQYIDEAFAGVGPSL 358
Score = 48.3 bits (99), Expect(3) = 4e-034
Identities = 19/40 (47%), Positives = 27/40 (67%)
Frame = +2 / +2
Query: 329 LLPADAFDRALARFWCHFADDKLGPAVGTVFASTGEDQEA 448
LLPAD ++RA+ARFW + +DKL P VF T +++ A
Sbjct: 356 LLPADPYERAVARFWAAYVEDKLLPPWRKVFRVTTDEERA 475
Score = 27.6 bits (54), Expect(3) = 4e-034
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = +3 / +3
Query: 666 FEALDEVRETIPAVDRLLEYARG 734
F LD + VDR++EYARG
Sbjct: 693 FXELDAXKAVFQDVDRVVEYARG 761
>gb|BM369733.2|BM369733 EBem07_SQ004_H07_R embryo, 28 DPA, no treatment, cv Optic, EBem07
Hordeum vulgare subsp. vulgare cDNA clone
EBem07_SQ004_H07 5', mRNA sequence
Length = 484
Score = 121 bits (258), Expect(2) = 5e-034
Identities = 47/84 (55%), Positives = 64/84 (76%)
Frame = +2 / +2
Query: 83 ASPLMLFGSWASSYTHRVQLALRLKGLEFDYVEEDLGNKSDELLRHNPVHKKVPVLVHGG 262
A L L G+W S Y RV++AL++KGL +DY+E+DL +KSD LL NPVHKKVPVL+H G
Sbjct: 65 AGELQLLGAWMSPYVIRVKVALQMKGLSYDYIEQDLQHKSDLLLSSNPVHKKVPVLIHDG 244
Query: 263 RALPESVIILQYLDDAWPETRPLL 334
R + ES+++L+Y+D+AW T P L
Sbjct: 245 RPVCESLVVLEYVDEAWAGTGPPL 316
Score = 44.1 bits (90), Expect(2) = 5e-034
Identities = 17/41 (41%), Positives = 25/41 (60%)
Frame = +2 / +2
Query: 326 PLLPADAFDRALARFWCHFADDKLGPAVGTVFASTGEDQEA 448
PLLPAD +DRA+ARFW + +D P+ + +T + A
Sbjct: 311 PLLPADPYDRAVARFWATYVNDTFFPSWRPLLRATTAEXRA 433
>gb|BU989585.1|BU989585 HF22C07r HF Hordeum vulgare subsp. vulgare cDNA clone HF22C07
5-PRIME, mRNA sequence
Length = 599
Score = 121 bits (258), Expect(2) = 1e-033
Identities = 48/81 (59%), Positives = 64/81 (79%)
Frame = +2 / +3
Query: 92 LMLFGSWASSYTHRVQLALRLKGLEFDYVEEDLGNKSDELLRHNPVHKKVPVLVHGGRAL 271
L L G+WAS++ RV++AL LKGL ++YVE+DL NKSD LL NPVHKKVPVL+H G+ +
Sbjct: 153 LKLLGTWASAWAARVKIALHLKGLSYEYVEQDLDNKSDLLLMSNPVHKKVPVLIHNGKPI 332
Query: 272 PESVIILQYLDDAWPETRPLL 334
ESV+IL+Y+D+A+ T P L
Sbjct: 333 CESVVILEYIDEAYGTTGPSL 395
Score = 42.8 bits (87), Expect(2) = 1e-033
Identities = 18/58 (31%), Positives = 30/58 (51%)
Frame = +2 / +3
Query: 329 LLPADAFDRALARFWCHFADDKLGPAVGTVFASTGEDQEAAVRQVHENLALIESELRD 502
LLP D ++RA+ARFW + D KL F + E++ + Q+ +E L++
Sbjct: 393 LLPTDPYERAVARFWVDYIDQKLVIPWKVAFTADEEEKTEGINQMLAAAHTLEGALKE 566
>gb|BF622224.2|BF622224 HVSMEa0002C05f Hordeum vulgare seedling shoot EST library
HVcDNA0001 (Cold stress) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEa0002C05f, mRNA sequence
Length = 705
Score = 119 bits (254), Expect(3) = 5e-033
Identities = 52/81 (64%), Positives = 62/81 (76%)
Frame = +2 / +1
Query: 92 LMLFGSWASSYTHRVQLALRLKGLEFDYVEEDLGNKSDELLRHNPVHKKVPVLVHGGRAL 271
L L G+WAS + RV+LAL LKGL F+ VEEDLGNKS+ LL NPVHKKVPVLVH G+ +
Sbjct: 79 LKLLGAWASPFVTRVKLALSLKGLSFEDVEEDLGNKSELLLSSNPVHKKVPVLVHNGKPV 258
Query: 272 PESVIILQYLDDAWPETRPLL 334
ESVIILQY+D+A+ P L
Sbjct: 259 CESVIILQYIDEAFAGIGPSL 321
Score = 40.0 bits (81), Expect(3) = 5e-033
Identities = 14/23 (60%), Positives = 18/23 (78%)
Frame = +2 / +1
Query: 329 LLPADAFDRALARFWCHFADDKL 397
LLP+D + RA+ARFW + DDKL
Sbjct: 319 LLPSDPYQRAVARFWAAYIDDKL 387
Score = 25.4 bits (49), Expect(3) = 5e-033
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = +2 / +1
Query: 536 DEVGLLDVVLGCGSYWLAVFEEVTGVR 616
+ VGL+DV LG WL E ++G +
Sbjct: 526 ETVGLVDVSLGSLLSWLNATEVMSGTK 606
>gb|BQ467879.1|BQ467879 HR01D11r HR Hordeum vulgare subsp. vulgare cDNA clone HR01D11
5-PRIME, mRNA sequence
Length = 500
Score = 113 bits (241), Expect(2) = 6e-033
Identities = 46/79 (58%), Positives = 58/79 (73%)
Frame = +2 / +3
Query: 98 LFGSWASSYTHRVQLALRLKGLEFDYVEEDLGNKSDELLRHNPVHKKVPVLVHGGRALPE 277
L G WAS + R QLALRLKG+ ++YVEE+L NKSD LR NPVHK VPVL+H G+ + E
Sbjct: 99 LLGMWASPFVVRAQLALRLKGVNYEYVEEELANKSDLFLRSNPVHKTVPVLIHDGKPICE 278
Query: 278 SVIILQYLDDAWPETRPLL 334
S +ILQY+D+A+ P L
Sbjct: 279 SQVILQYIDEAFAGVGPSL 335
Score = 48.3 bits (99), Expect(2) = 6e-033
Identities = 19/40 (47%), Positives = 27/40 (67%)
Frame = +2 / +3
Query: 329 LLPADAFDRALARFWCHFADDKLGPAVGTVFASTGEDQEA 448
LLPAD ++RA+ARFW + +DKL P VF T +++ A
Sbjct: 333 LLPADPYERAVARFWAAYVEDKLLPPWRKVFRVTTDEERA 452
>gb|BF622215.3|BF622215 HVSMEa0002A20f Hordeum vulgare seedling shoot EST library
HVcDNA0001 (Cold stress) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEa0002A20f, mRNA sequence
Length = 846
Score = 119 bits (254), Expect(3) = 8e-033
Identities = 52/81 (64%), Positives = 62/81 (76%)
Frame = +2 / +1
Query: 92 LMLFGSWASSYTHRVQLALRLKGLEFDYVEEDLGNKSDELLRHNPVHKKVPVLVHGGRAL 271
L L G+WAS + RV+LAL LKGL F+ VEEDLGNKS+ LL NPVHKKVPVLVH G+ +
Sbjct: 82 LKLLGAWASPFVTRVKLALSLKGLSFEDVEEDLGNKSELLLSSNPVHKKVPVLVHNGKPV 261
Query: 272 PESVIILQYLDDAWPETRPLL 334
ESVIILQY+D+A+ P L
Sbjct: 262 CESVIILQYIDEAFAGIGPSL 324
Score = 40.0 bits (81), Expect(3) = 8e-033
Identities = 14/23 (60%), Positives = 18/23 (78%)
Frame = +2 / +1
Query: 329 LLPADAFDRALARFWCHFADDKL 397
LLP+D + RA+ARFW + DDKL
Sbjct: 322 LLPSDPYQRAVARFWAAYIDDKL 390
Score = 25.4 bits (49), Expect(3) = 8e-033
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = +2 / +1
Query: 536 DEVGLLDVVLGCGSYWLAVFEEVTGVR 616
+ VGL+DV LG WL E ++G +
Sbjct: 529 ETVGLVDVSLGSLLSWLNATEVMSGTK 609
>gb|BM375338.2|BM375338 EBem06_SQ003_A18_R embryo, 21 DPA, no treatment, cv Optic, EBem06
Hordeum vulgare subsp. vulgare cDNA clone
EBem06_SQ003_A18 5', mRNA sequence
Length = 480
Score = 141 bits (302), Expect = 9e-033
Identities = 56/105 (53%), Positives = 75/105 (71%)
Frame = +2 / +2
Query: 92 LMLFGSWASSYTHRVQLALRLKGLEFDYVEEDLGNKSDELLRHNPVHKKVPVLVHGGRAL 271
L L G S + RV+LAL +KG+ ++Y+E D+ +K + LLR+NPVHKKVPVL+H G L
Sbjct: 38 LKLLGLMVSPFVTRVRLALHMKGVGYEYIETDVLDKGELLLRYNPVHKKVPVLIHNGVPL 217
Query: 272 PESVIILQYLDDAWPETRPLLPADAFDRALARFWCHFADDKLGPA 406
ES +I+QY+D+ WP P+LPAD + RA ARFW + DDKL PA
Sbjct: 218 CESQVIVQYVDEVWPAGAPILPADPYARATARFWAAYVDDKLFPA 352
>gb|BF624618.2|BF624618 HVSMEa0017E14f Hordeum vulgare seedling shoot EST library
HVcDNA0001 (Cold stress) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEa0017E14f, mRNA sequence
Length = 887
Score = 119 bits (254), Expect(2) = 3e-032
Identities = 52/81 (64%), Positives = 62/81 (76%)
Frame = +2 / +2
Query: 92 LMLFGSWASSYTHRVQLALRLKGLEFDYVEEDLGNKSDELLRHNPVHKKVPVLVHGGRAL 271
L L G+WAS + RV+LAL LKGL F+ VEEDLGNKS+ LL NPVHKKVPVLVH G+ +
Sbjct: 77 LKLLGAWASPFVTRVKLALSLKGLSFEDVEEDLGNKSELLLSSNPVHKKVPVLVHNGKPV 256
Query: 272 PESVIILQYLDDAWPETRPLL 334
ESVIILQY+D+A+ P L
Sbjct: 257 CESVIILQYIDEAFAGIGPSL 319
Score = 40.0 bits (81), Expect(2) = 3e-032
Identities = 14/23 (60%), Positives = 18/23 (78%)
Frame = +2 / +2
Query: 329 LLPADAFDRALARFWCHFADDKL 397
LLP+D + RA+ARFW + DDKL
Sbjct: 317 LLPSDPYQRAVARFWAAYIDDKL 385
>gb|BF629286.3|BF629286 HVSMEb0010K15f Hordeum vulgare seedling shoot EST library
HVcDNA0002 (Dehydration stress) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEb0010K15f, mRNA sequence
Length = 749
Score = 119 bits (254), Expect(2) = 3e-032
Identities = 52/81 (64%), Positives = 62/81 (76%)
Frame = +2 / +1
Query: 92 LMLFGSWASSYTHRVQLALRLKGLEFDYVEEDLGNKSDELLRHNPVHKKVPVLVHGGRAL 271
L L G+WAS + RV+LAL LKGL F+ VEEDLGNKS+ LL NPVHKKVPVLVH G+ +
Sbjct: 82 LKLLGAWASPFVTRVKLALSLKGLSFEDVEEDLGNKSELLLSSNPVHKKVPVLVHNGKPV 261
Query: 272 PESVIILQYLDDAWPETRPLL 334
ESVIILQY+D+A+ P L
Sbjct: 262 CESVIILQYIDEAFAGIGPSL 324
Score = 40.0 bits (81), Expect(2) = 3e-032
Identities = 14/23 (60%), Positives = 18/23 (78%)
Frame = +2 / +1
Query: 329 LLPADAFDRALARFWCHFADDKL 397
LLP+D + RA+ARFW + DDKL
Sbjct: 322 LLPSDPYQRAVARFWAAYIDDKL 390
>gb|BF621862.3|BF621862 HVSMEa0001C05f Hordeum vulgare seedling shoot EST library
HVcDNA0001 (Cold stress) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEa0001C05f, mRNA sequence
Length = 595
Score = 119 bits (254), Expect(2) = 3e-032
Identities = 52/81 (64%), Positives = 62/81 (76%)
Frame = +2 / +1
Query: 92 LMLFGSWASSYTHRVQLALRLKGLEFDYVEEDLGNKSDELLRHNPVHKKVPVLVHGGRAL 271
L L G+WAS + RV+LAL LKGL F+ VEEDLGNKS+ LL NPVHKKVPVLVH G+ +
Sbjct: 82 LKLLGAWASPFVTRVKLALSLKGLSFEDVEEDLGNKSELLLSSNPVHKKVPVLVHNGKPV 261
Query: 272 PESVIILQYLDDAWPETRPLL 334
ESVIILQY+D+A+ P L
Sbjct: 262 CESVIILQYIDEAFAGIGPSL 324
Score = 40.0 bits (81), Expect(2) = 3e-032
Identities = 14/23 (60%), Positives = 18/23 (78%)
Frame = +2 / +1
Query: 329 LLPADAFDRALARFWCHFADDKL 397
LLP+D + RA+ARFW + DDKL
Sbjct: 322 LLPSDPYQRAVARFWAAYIDDKL 390
>gb|BG299731.1|BG299731 HVSMEa0021J09f Hordeum vulgare seedling shoot EST library
HVcDNA0001 (Cold stress) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEa0021J09f, mRNA sequence
Length = 569
Score = 119 bits (254), Expect(2) = 3e-032
Identities = 52/81 (64%), Positives = 62/81 (76%)
Frame = +2 / +2
Query: 92 LMLFGSWASSYTHRVQLALRLKGLEFDYVEEDLGNKSDELLRHNPVHKKVPVLVHGGRAL 271
L L G+WAS + RV+LAL LKGL F+ VEEDLGNKS+ LL NPVHKKVPVLVH G+ +
Sbjct: 71 LKLLGAWASPFVTRVKLALSLKGLSFEDVEEDLGNKSELLLSSNPVHKKVPVLVHNGKPV 250
Query: 272 PESVIILQYLDDAWPETRPLL 334
ESVIILQY+D+A+ P L
Sbjct: 251 CESVIILQYIDEAFAGIGPSL 313
Score = 40.0 bits (81), Expect(2) = 3e-032
Identities = 14/23 (60%), Positives = 18/23 (78%)
Frame = +2 / +2
Query: 329 LLPADAFDRALARFWCHFADDKL 397
LLP+D + RA+ARFW + DDKL
Sbjct: 311 LLPSDPYQRAVARFWAAYIDDKL 379
>gb|BQ466487.1|BQ466487 HT02K21r HT Hordeum vulgare subsp. vulgare cDNA clone HT02K21
5-PRIME, mRNA sequence
Length = 535
Score = 119 bits (254), Expect(2) = 3e-032
Identities = 52/81 (64%), Positives = 62/81 (76%)
Frame = +2 / +1
Query: 92 LMLFGSWASSYTHRVQLALRLKGLEFDYVEEDLGNKSDELLRHNPVHKKVPVLVHGGRAL 271
L L G+WAS + RV+LAL LKGL F+ VEEDLGNKS+ LL NPVHKKVPVLVH G+ +
Sbjct: 88 LKLLGAWASPFVTRVKLALSLKGLSFEDVEEDLGNKSELLLSSNPVHKKVPVLVHNGKPV 267
Query: 272 PESVIILQYLDDAWPETRPLL 334
ESVIILQY+D+A+ P L
Sbjct: 268 CESVIILQYIDEAFAGIGPSL 330
Score = 40.0 bits (81), Expect(2) = 3e-032
Identities = 14/23 (60%), Positives = 18/23 (78%)
Frame = +2 / +1
Query: 329 LLPADAFDRALARFWCHFADDKL 397
LLP+D + RA+ARFW + DDKL
Sbjct: 328 LLPSDPYQRAVARFWAAYIDDKL 396
>gb|BF622512.2|BF622512 HVSMEa0004K18f Hordeum vulgare seedling shoot EST library
HVcDNA0001 (Cold stress) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEa0004K18f, mRNA sequence
Length = 487
Score = 119 bits (254), Expect(2) = 3e-032
Identities = 52/81 (64%), Positives = 62/81 (76%)
Frame = +2 / +2
Query: 92 LMLFGSWASSYTHRVQLALRLKGLEFDYVEEDLGNKSDELLRHNPVHKKVPVLVHGGRAL 271
L L G+WAS + RV+LAL LKGL F+ VEEDLGNKS+ LL NPVHKKVPVLVH G+ +
Sbjct: 77 LKLLGAWASPFVTRVKLALSLKGLSFEDVEEDLGNKSELLLSSNPVHKKVPVLVHNGKPV 256
Query: 272 PESVIILQYLDDAWPETRPLL 334
ESVIILQY+D+A+ P L
Sbjct: 257 CESVIILQYIDEAFAGIGPSL 319
Score = 40.0 bits (81), Expect(2) = 3e-032
Identities = 14/23 (60%), Positives = 18/23 (78%)
Frame = +2 / +2
Query: 329 LLPADAFDRALARFWCHFADDKL 397
LLP+D + RA+ARFW + DDKL
Sbjct: 317 LLPSDPYQRAVARFWAAYIDDKL 385
>gb|BF624202.2|BF624202 HVSMEa0012J22f Hordeum vulgare seedling shoot EST library
HVcDNA0001 (Cold stress) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEa0012J22f, mRNA sequence
Length = 487
Score = 119 bits (254), Expect(2) = 3e-032
Identities = 52/81 (64%), Positives = 62/81 (76%)
Frame = +2 / +1
Query: 92 LMLFGSWASSYTHRVQLALRLKGLEFDYVEEDLGNKSDELLRHNPVHKKVPVLVHGGRAL 271
L L G+WAS + RV+LAL LKGL F+ VEEDLGNKS+ LL NPVHKKVPVLVH G+ +
Sbjct: 85 LKLLGAWASPFVTRVKLALSLKGLSFEDVEEDLGNKSELLLSSNPVHKKVPVLVHNGKPV 264
Query: 272 PESVIILQYLDDAWPETRPLL 334
ESVIILQY+D+A+ P L
Sbjct: 265 CESVIILQYIDEAFAGIGPSL 327
Score = 40.0 bits (81), Expect(2) = 3e-032
Identities = 14/23 (60%), Positives = 18/23 (78%)
Frame = +2 / +1
Query: 329 LLPADAFDRALARFWCHFADDKL 397
LLP+D + RA+ARFW + DDKL
Sbjct: 325 LLPSDPYQRAVARFWAAYIDDKL 393
>gb|AL503233.1|AL503233 AL503233 Hordeum vulgare Barke roots Hordeum vulgare subsp. vulgare
cDNA clone HW01D13T 5', mRNA sequence
Length = 683
Score = 133 bits (286), Expect(2) = 6e-032
Identities = 54/117 (46%), Positives = 78/117 (66%)
Frame = +2 / +2
Query: 98 LFGSWASSYTHRVQLALRLKGLEFDYVEEDLGNKSDELLRHNPVHKKVPVLVHGGRALPE 277
L GS S + RV++AL KG+ ++Y+E+DL +K D LL NPVH KVPVL+H GR + E
Sbjct: 119 LLGSVMSPFAXRVRMALHAKGVSYEYLEQDLFHKGDLLLASNPVHNKVPVLIHAGRPVCE 298
Query: 278 SVIILQYLDDAWPETRPLLPADAFDRALARFWCHFADDKLGPAVGTVFASTGEDQEA 448
S+ I++Y+++ W + LLPAD + RA+ARFW + DDKL PA + + E+ A
Sbjct: 299 SLAIVEYVNEVWADGASLLPADPYGRAVARFWAAYVDDKLFPAWLGILRAATEEDRA 469
Score = 24.4 bits (47), Expect(2) = 6e-032
Identities = 7/13 (53%), Positives = 9/13 (69%)
Frame = +2 / +3
Query: 545 GLLDVVLGCGSYW 583
G LD+ LGC +W
Sbjct: 567 GTLDLALGCNLFW 605
>gb|BE214207.2|BE214207 HV_CEb0002K18f Hordeum vulgare seedling green leaf EST library
HVcDNA0005 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEb0002K18f, mRNA sequence
Length = 717
Score = 138 bits (296), Expect = 6e-032
Identities = 55/105 (52%), Positives = 74/105 (70%)
Frame = +2 / +3
Query: 92 LMLFGSWASSYTHRVQLALRLKGLEFDYVEEDLGNKSDELLRHNPVHKKVPVLVHGGRAL 271
L L G S + RV+LAL +KG+ ++Y+E D+ +K + LLR+NPVHKKVPVL+H G L
Sbjct: 24 LKLLGLMVSPFVTRVRLALHMKGVGYEYIETDVLDKGELLLRYNPVHKKVPVLIHNGVPL 203
Query: 272 PESVIILQYLDDAWPETRPLLPADAFDRALARFWCHFADDKLGPA 406
ES +I+QY+D+ WP P+LPAD + RA AR W + DDKL PA
Sbjct: 204 CESQVIVQYVDEVWPAGAPILPADPYARATARLWAAYVDDKLFPA 338
>gb|BF255189.1|BF255189 HVSMEf0006D04f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEf0006D04f, mRNA sequence
Length = 617
Score = 135 bits (290), Expect(2) = 1e-031
Identities = 53/106 (50%), Positives = 76/106 (71%)
Frame = +2 / -2
Query: 65 SAIPPAASPLMLFGSWASSYTHRVQLALRLKGLEFDYVEEDLGNKSDELLRHNPVHKKVP 244
+A ++ P+ L G++ S HR +LALRLKG+ ++ +EEDL NKS+ LL HN VHK V
Sbjct: 598 NAAAMSSEPVRLIGAFGSPVVHRAELALRLKGVPYELIEEDLNNKSELLLTHNTVHKTVT 419
Query: 245 VLVHGGRALPESVIILQYLDDAWPETRPLLPADAFDRALARFWCHF 382
VL+HG R++P+S++I++Y+D+A+P PLLP D RA ARFW F
Sbjct: 418 VLLHGHRSIPDSLVIVEYIDEAFPGGPPLLPVDPLARANARFWARF 281
Score = 24.4 bits (47), Expect(2) = 1e-031
Identities = 8/17 (47%), Positives = 12/17 (70%)
Frame = +2 / -2
Query: 566 GCGSYWLAVFEEVTGVR 616
G ++W+ V EE+ GVR
Sbjct: 196 GALAHWMGVVEEMAGVR 146
>gb|BG299389.1|BG299389 HVSMEa0019L19f Hordeum vulgare seedling shoot EST library
HVcDNA0001 (Cold stress) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEa0019L19f, mRNA sequence
Length = 624
Score = 137 bits (294), Expect = 1e-031
Identities = 55/105 (52%), Positives = 74/105 (70%)
Frame = +2 / +2
Query: 92 LMLFGSWASSYTHRVQLALRLKGLEFDYVEEDLGNKSDELLRHNPVHKKVPVLVHGGRAL 271
L L G S + RV+LAL +KG+ ++Y+E D+ +K + LLR+NPVHKKVPVL+H G L
Sbjct: 71 LKLLGLMVSPFVTRVRLALHMKGVGYEYIETDVLDKGELLLRYNPVHKKVPVLIHNGVPL 250
Query: 272 PESVIILQYLDDAWPETRPLLPADAFDRALARFWCHFADDKLGPA 406
ES +I+QY+D+ W P+LPAD + RA ARFW + DDKL PA
Sbjct: 251 CESQVIVQYVDEVWSAGAPILPADPYARATARFWAAYVDDKLFPA 385
>gb|BG368894.1|BG368894 HVSMEi0021D06f Hordeum vulgare 20 DAP spike EST library HVcDNA0010
(20 DAP) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEi0021D06f, mRNA sequence
Length = 793
Score = 137 bits (294), Expect = 1e-031
Identities = 55/105 (52%), Positives = 74/105 (70%)
Frame = +2 / +2
Query: 92 LMLFGSWASSYTHRVQLALRLKGLEFDYVEEDLGNKSDELLRHNPVHKKVPVLVHGGRAL 271
L L G S + RV+LAL +KG+ ++Y+E D+ +K + LLR+NPVHKKVPVL+H G L
Sbjct: 32 LKLLGLMVSPFVTRVRLALHMKGVGYEYIETDVLDKGELLLRYNPVHKKVPVLIHNGVPL 211
Query: 272 PESVIILQYLDDAWPETRPLLPADAFDRALARFWCHFADDKLGPA 406
ES +I+QY+D+ W P+LPAD + RA ARFW + DDKL PA
Sbjct: 212 CESQVIVQYVDEVWSAGAPILPADPYARATARFWAAYVDDKLFPA 346
Database: Hordeum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:16 PM
Number of letters in database: 175,134,539
Number of sequences in database: 312,970
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 475,735,376
Number of Sequences: 312970
Number of extensions: 7483962
Number of successful extensions: 203244
Number of sequences better than 1.0e-020: 344
length of database: 58,378,179
effective HSP length: 53
effective length of database: 41,790,769
effective search space used: 15379002992
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)