TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2455878.2.1
(1327 letters)
Database: Hordeum_nucl_with_EST.fasta
312,970 sequences; 175,134,539 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BM817346.1|BM817346 HC111F01_T3.ab1 HC Hordeum vulgare s... 186 3e-068
gb|BJ462654.1|BJ462654 BJ462654 K. Sato unpublished cDNA li... 204 8e-068
gb|AL503330.1|AL503330 AL503330 Hordeum vulgare Barke roots... 176 2e-067
gb|BF260650.2|BF260650 HVSMEf0022J06f Hordeum vulgare seedl... 160 3e-067
gb|AL503735.1|AL503735 AL503735 Hordeum vulgare Barke roots... 200 1e-063
gb|BF620538.3|BF620538 HVSMEc0020C24f Hordeum vulgare seedl... 198 2e-063
gb|AV926997.1|AV926997 AV926997 K. Sato unpublished cDNA li... 198 9e-063
gb|AV925342.1|AV925342 AV925342 K. Sato unpublished cDNA li... 198 9e-063
gb|BF259091.3|BF259091 HVSMEf0017K20f Hordeum vulgare seedl... 160 2e-062
gb|BF256951.3|BF256951 HVSMEf0011H09f Hordeum vulgare seedl... 154 4e-061
gb|BF620185.2|BF620185 HVSMEc0018M19f Hordeum vulgare seedl... 201 4e-060
gb|BF258405.3|BF258405 HVSMEf0015K05f Hordeum vulgare seedl... 182 7e-060
gb|AV913354.1|AV913354 AV913354 K. Sato unpublished cDNA li... 199 1e-059
gb|AV926805.1|AV926805 AV926805 K. Sato unpublished cDNA li... 198 3e-059
gb|AV922821.1|AV922821 AV922821 K. Sato unpublished cDNA li... 198 3e-059
gb|BF260951.2|BF260951 HVSMEf0023F23f Hordeum vulgare seedl... 187 6e-059
gb|BF260366.2|BF260366 HVSMEf0021M22f Hordeum vulgare seedl... 152 7e-059
gb|AV925298.1|AV925298 AV925298 K. Sato unpublished cDNA li... 196 1e-058
gb|BF260804.2|BF260804 HVSMEf0022P20f Hordeum vulgare seedl... 152 2e-058
gb|AL504052.1|AL504052 AL504052 Hordeum vulgare Barke roots... 157 3e-058
gb|BG309181.2|BG309181 HVSMEc0004K06f Hordeum vulgare seedl... 198 3e-058
gb|BF260521.2|BF260521 HVSMEf0022D17f Hordeum vulgare seedl... 182 5e-058
gb|BJ465101.1|BJ465101 BJ465101 K. Sato unpublished cDNA li... 160 5e-058
gb|AV916428.1|AV916428 AV916428 K. Sato unpublished cDNA li... 160 5e-058
gb|BJ465100.1|BJ465100 BJ465100 K. Sato unpublished cDNA li... 160 5e-058
gb|BF259028.2|BF259028 HVSMEf0017H05f Hordeum vulgare seedl... 182 7e-058
gb|BF631324.2|BF631324 HVSMEb0015J20f Hordeum vulgare seedl... 182 1e-057
gb|BJ463887.1|BJ463887 BJ463887 K. Sato unpublished cDNA li... 112 3e-057
gb|BJ467760.1|BJ467760 BJ467760 K. Sato unpublished cDNA li... 204 3e-057
gb|AV917258.1|AV917258 AV917258 K. Sato unpublished cDNA li... 198 3e-057
gb|AV922427.1|AV922427 AV922427 K. Sato unpublished cDNA li... 198 3e-057
gb|BF256773.2|BF256773 HVSMEf0010P15f Hordeum vulgare seedl... 182 4e-057
gb|BF628014.2|BF628014 HVSMEb0002J23f Hordeum vulgare seedl... 145 5e-057
gb|BF259024.3|BF259024 HVSMEf0017H01f Hordeum vulgare seedl... 205 1e-056
gb|BJ468335.1|BJ468335 BJ468335 K. Sato unpublished cDNA li... 198 2e-056
gb|AL504343.1|AL504343 AL504343 Hordeum vulgare Barke roots... 182 8e-056
gb|BJ463550.1|BJ463550 BJ463550 K. Sato unpublished cDNA li... 204 3e-055
gb|CB882435.1|CB882435 HL01N17w HL Hordeum vulgare subsp. v... 205 5e-055
gb|BF260349.2|BF260349 HVSMEf0021M05f Hordeum vulgare seedl... 205 5e-055
gb|BJ466406.1|BJ466406 BJ466406 K. Sato unpublished cDNA li... 200 7e-055
gb|AV921748.1|AV921748 AV921748 K. Sato unpublished cDNA li... 204 6e-054
gb|BJ468231.1|BJ468231 BJ468231 K. Sato unpublished cDNA li... 204 6e-054
gb|BF257368.2|BF257368 HVSMEf0012L06f Hordeum vulgare seedl... 205 6e-054
gb|BJ468058.1|BJ468058 BJ468058 K. Sato unpublished cDNA li... 198 8e-054
gb|AV918157.1|AV918157 AV918157 K. Sato unpublished cDNA li... 200 1e-053
gb|BF258596.2|BF258596 HVSMEf0016C17f Hordeum vulgare seedl... 154 1e-053
gb|BF617976.2|BF617976 HVSMEc0002N19f Hordeum vulgare seedl... 201 2e-053
gb|BF253855.2|BF253855 HVSMEf0002E24f Hordeum vulgare seedl... 154 4e-053
gb|BJ465166.1|BJ465166 BJ465166 K. Sato unpublished cDNA li... 148 4e-053
gb|BI778623.2|BI778623 EBro07_SQ003_N10_R root, 3 week, red... 150 2e-052
gb|AV921351.1|AV921351 AV921351 K. Sato unpublished cDNA li... 198 3e-052
gb|AV914623.1|AV914623 AV914623 K. Sato unpublished cDNA li... 199 3e-052
gb|AV925163.1|AV925163 AV925163 K. Sato unpublished cDNA li... 198 5e-052
gb|BF254088.2|BF254088 HVSMEf0002P22f Hordeum vulgare seedl... 154 7e-052
gb|AV917949.1|AV917949 AV917949 K. Sato unpublished cDNA li... 204 9e-052
gb|BJ467944.1|BJ467944 BJ467944 K. Sato unpublished cDNA li... 204 9e-052
gb|BJ468232.1|BJ468232 BJ468232 K. Sato unpublished cDNA li... 204 9e-052
gb|AL503406.1|AL503406 AL503406 Hordeum vulgare Barke roots... 155 9e-052
gb|AV918876.1|AV918876 AV918876 K. Sato unpublished cDNA li... 204 1e-051
gb|AV923580.1|AV923580 AV923580 K. Sato unpublished cDNA li... 197 1e-051
gb|BQ467978.1|BQ467978 HR01I14r HR Hordeum vulgare subsp. v... 160 1e-051
gb|CB876850.1|CB876850 HP02J21T HP Hordeum vulgare subsp. v... 199 2e-051
gb|BF257879.2|BF257879 HVSMEf0014B23f Hordeum vulgare seedl... 154 2e-051
gb|BG300069.1|BG300069 HVSMEb0011D24f Hordeum vulgare seedl... 154 2e-051
gb|BF628372.2|BF628372 HVSMEb0003N17f Hordeum vulgare seedl... 196 2e-051
gb|AV924443.1|AV924443 AV924443 K. Sato unpublished cDNA li... 154 2e-051
gb|CD662493.1|CD662493 UCRHV18_01ch06_b1 Drought-stressed D... 100 3e-051
gb|BJ464128.1|BJ464128 BJ464128 K. Sato unpublished cDNA li... 154 4e-051
gb|BF258896.1|BF258896 HVSMEf0016P14f Hordeum vulgare seedl... 154 6e-051
gb|AV918926.1|AV918926 AV918926 K. Sato unpublished cDNA li... 198 8e-051
gb|BF255022.2|BF255022 HVSMEf0005K23f Hordeum vulgare seedl... 182 1e-050
gb|AL501392.1|AL501392 AL501392 Hordeum vulgare Barke roots... 200 2e-050
gb|AV920613.1|AV920613 AV920613 K. Sato unpublished cDNA li... 200 2e-050
gb|AV929534.1|AV929534 AV929534 K. Sato unpublished cDNA li... 200 2e-050
gb|BQ662094.1|BQ662094 HR01I14u HR Hordeum vulgare subsp. v... 199 2e-050
gb|BG300362.1|BG300362 HVSMEb0016B12f Hordeum vulgare seedl... 178 2e-050
gb|AL450686.1|AL450686 AL450686 Hordeum vulgare Barke etiol... 199 3e-050
gb|AV924347.1|AV924347 AV924347 K. Sato unpublished cDNA li... 182 3e-050
gb|AL502790.1|AL502790 AL502790 Hordeum vulgare Barke roots... 198 5e-050
gb|AV918077.1|AV918077 AV918077 K. Sato unpublished cDNA li... 198 8e-050
gb|AV918703.1|AV918703 AV918703 K. Sato unpublished cDNA li... 198 8e-050
gb|CD663222.1|CD663222 UCRHV18_04db05_b1 Drought-stressed D... 198 8e-050
gb|AL505623.1|AL505623 AL505623 Hordeum vulgare Barke roots... 160 1e-049
gb|BJ464939.1|BJ464939 BJ464939 K. Sato unpublished cDNA li... 148 3e-049
gb|AV913744.1|AV913744 AV913744 K. Sato unpublished cDNA li... 148 3e-049
gb|AV913622.1|AV913622 AV913622 K. Sato unpublished cDNA li... 148 3e-049
gb|AV916549.1|AV916549 AV916549 K. Sato unpublished cDNA li... 148 3e-049
gb|BF261193.2|BF261193 HVSMEf0011F03f Hordeum vulgare seedl... 145 3e-049
gb|BF259348.2|BF259348 HVSMEf0019F16f Hordeum vulgare seedl... 93 3e-049
gb|BF257748.2|BF257748 HVSMEf0013M04f Hordeum vulgare seedl... 195 4e-049
gb|AV916317.1|AV916317 AV916317 K. Sato unpublished cDNA li... 156 7e-049
gb|AV925371.1|AV925371 AV925371 K. Sato unpublished cDNA li... 151 7e-049
gb|AL502883.1|AL502883 AL502883 Hordeum vulgare Barke roots... 193 2e-048
gb|AL450982.1|AL450982 AL450982 Hordeum vulgare Barke etiol... 100 2e-048
gb|BF260928.2|BF260928 HVSMEf0023E24f Hordeum vulgare seedl... 93 3e-048
gb|AV930320.1|AV930320 AV930320 K. Sato unpublished cDNA li... 104 3e-048
gb|AV913573.1|AV913573 AV913573 K. Sato unpublished cDNA li... 80 2e-047
gb|BF260927.2|BF260927 HVSMEf0023E23f Hordeum vulgare seedl... 134 3e-047
gb|AL504019.1|AL504019 AL504019 Hordeum vulgare Barke roots... 153 7e-047
gb|BF258585.2|BF258585 HVSMEf0016C04f Hordeum vulgare seedl... 167 1e-046
gb|CD662288.1|CD662288 UCRHV18_01aa10_b1 Drought-stressed D... 100 1e-046
gb|CD663812.1|CD663812 UCRHV18_06ch08_b1 Drought-stressed D... 100 1e-046
gb|BQ662115.1|BQ662115 HR01K01u HR Hordeum vulgare subsp. v... 96 2e-046
emb|X77467.1|HVOMET H.vulgare L. mRNA for flavonoid 7-O-met... 90 2e-046
gb|BG310376.1|BG310376 HVSMEc0018B10f Hordeum vulgare seedl... 137 4e-046
gb|AL504415.1|AL504415 AL504415 Hordeum vulgare Barke roots... 115 5e-046
gb|BF253847.2|BF253847 HVSMEf0002E15f Hordeum vulgare seedl... 138 1e-045
gb|AV928262.1|AV928262 AV928262 K. Sato unpublished cDNA li... 96 1e-045
gb|BI956453.1|BI956453 HVSMEn0003H10f Hordeum vulgare rachi... 100 1e-045
gb|BI777619.2|BI777619 EBro08_SQ001_A05_R root, 3 week, dro... 183 1e-045
gb|AV925792.1|AV925792 AV925792 K. Sato unpublished cDNA li... 182 3e-045
gb|BJ468872.1|BJ468872 BJ468872 K. Sato unpublished cDNA li... 182 4e-045
gb|BF257563.2|BF257563 HVSMEf0013E02f Hordeum vulgare seedl... 143 4e-045
gb|AV929439.1|AV929439 AV929439 K. Sato unpublished cDNA li... 96 8e-045
gb|BF626066.2|BF626066 HVSMEa0015J06f Hordeum vulgare seedl... 149 9e-045
gb|AV931831.1|AV931831 AV931831 K. Sato unpublished cDNA li... 104 1e-044
gb|AV928022.1|AV928022 AV928022 K. Sato unpublished cDNA li... 104 1e-044
gb|CB879386.1|CB879386 HP02A07w HP Hordeum vulgare subsp. v... 88 2e-044
gb|BF258909.2|BF258909 HVSMEf0017A08f Hordeum vulgare seedl... 135 2e-044
gb|BI778179.2|BI778179 EBro07_SQ002_H05_R root, 3 week, red... 68 4e-044
gb|AV930527.1|AV930527 AV930527 K. Sato unpublished cDNA li... 104 7e-044
gb|AV930452.1|AV930452 AV930452 K. Sato unpublished cDNA li... 100 1e-043
gb|BF629846.2|BF629846 HVSMEb0007B06f Hordeum vulgare seedl... 145 1e-042
gb|AL505788.1|AL505788 AL505788 Hordeum vulgare Barke roots... 152 2e-042
gb|AV927324.1|AV927324 AV927324 K. Sato unpublished cDNA li... 104 3e-042
gb|CD662211.1|CD662211 UCRHV18_01af07_b1 Drought-stressed D... 104 3e-042
gb|CD663190.1|CD663190 UCRHV18_04cf12_b1 Drought-stressed D... 104 3e-042
gb|AV931697.1|AV931697 AV931697 K. Sato unpublished cDNA li... 104 3e-042
gb|CD662527.1|CD662527 UCRHV18_02ba04_b1 Drought-stressed D... 104 3e-042
gb|AV930495.1|AV930495 AV930495 K. Sato unpublished cDNA li... 104 4e-042
gb|BJ463768.1|BJ463768 BJ463768 K. Sato unpublished cDNA li... 77 6e-042
gb|BF626135.2|BF626135 HVSMEa0015P20f Hordeum vulgare seedl... 148 7e-042
gb|AV913405.1|AV913405 AV913405 K. Sato unpublished cDNA li... 68 1e-041
gb|BF254372.2|BF254372 HVSMEf0003M21f Hordeum vulgare seedl... 96 2e-041
gb|AV920383.1|AV920383 AV920383 K. Sato unpublished cDNA li... 96 4e-041
gb|AV930928.1|AV930928 AV930928 K. Sato unpublished cDNA li... 96 4e-041
gb|AL500356.1|AL500356 AL500356 Hordeum vulgare Barke etiol... 104 8e-041
gb|BQ768678.1|BQ768678 EBro08_SQ012_J09_R root, 3 week, dro... 137 8e-041
gb|AL503073.1|AL503073 AL503073 Hordeum vulgare Barke roots... 167 1e-040
gb|CD663904.1|CD663904 UCRHV18_07ab10_b1 Drought-stressed D... 100 2e-040
gb|CD662275.1|CD662275 UCRHV18_01be09_b1 Drought-stressed D... 100 2e-040
gb|BF617480.2|BF617480 HVSMEc0017J06f Hordeum vulgare seedl... 166 3e-040
gb|AL500735.1|AL500735 AL500735 Hordeum vulgare Barke roots... 151 4e-040
gb|BF253960.2|BF253960 HVSMEf0002J18f Hordeum vulgare seedl... 96 7e-040
gb|AV915515.1|AV915515 AV915515 K. Sato unpublished cDNA li... 96 8e-040
gb|CD663459.1|CD663459 UCRHV18_05cc01_b1 Drought-stressed D... 97 1e-039
gb|BF257415.2|BF257415 HVSMEf0012N14f Hordeum vulgare seedl... 69 1e-038
gb|BF253693.3|BF253693 HVSMEf0001N20f Hordeum vulgare seedl... 104 6e-038
gb|AL503891.1|AL503891 AL503891 Hordeum vulgare Barke roots... 77 1e-037
gb|AL503161.1|AL503161 AL503161 Hordeum vulgare Barke roots... 155 5e-037
gb|AV923798.1|AV923798 AV923798 K. Sato unpublished cDNA li... 154 1e-036
gb|AL501157.1|AL501157 AL501157 Hordeum vulgare Barke roots... 152 5e-036
gb|BQ765268.1|BQ765268 EBro03_SQ006_N17_R root, 3 week, wat... 100 2e-035
gb|CB879533.1|CB879533 HP02J21w HP Hordeum vulgare subsp. v... 88 2e-035
gb|AL499854.1|AL499854 AL499854 Hordeum vulgare Barke etiol... 68 6e-035
gb|AV928023.1|AV928023 AV928023 K. Sato unpublished cDNA li... 86 6e-035
gb|AV931161.1|AV931161 AV931161 K. Sato unpublished cDNA li... 98 6e-035
gb|BF257695.2|BF257695 HVSMEf0013J23f Hordeum vulgare seedl... 106 3e-034
gb|BF259414.3|BF259414 HVSMEf0019A18f Hordeum vulgare seedl... 89 3e-034
gb|CB879142.1|CB879142 HP11B09T HP Hordeum vulgare subsp. v... 88 7e-034
gb|BF253494.2|BF253494 HVSMEf0001B12f Hordeum vulgare seedl... 87 2e-033
gb|AV927543.1|AV927543 AV927543 K. Sato unpublished cDNA li... 104 3e-033
gb|BF258007.2|BF258007 HVSMEf0014H17f Hordeum vulgare seedl... 138 7e-033
gb|BF258733.1|BF258733 HVSMEf0016I14f Hordeum vulgare seedl... 68 1e-032
gb|BQ765347.1|BQ765347 EBro03_SQ006_M19_R root, 3 week, wat... 104 2e-032
gb|AL503041.1|AL503041 AL503041 Hordeum vulgare Barke roots... 138 9e-032
gb|AL500730.1|AL500730 AL500730 Hordeum vulgare Barke roots... 137 1e-031
gb|BF259978.2|BF259978 HVSMEf0020M11f Hordeum vulgare seedl... 124 6e-031
gb|BF254051.2|BF254051 HVSMEf0002N23f Hordeum vulgare seedl... 134 1e-030
gb|AV926277.1|AV926277 AV926277 K. Sato unpublished cDNA li... 100 3e-030
gb|AV836790.1|AV836790 AV836790 K. Sato unpublished cDNA li... 73 3e-030
gb|BF256054.2|BF256054 HVSMEf0008J16f Hordeum vulgare seedl... 90 3e-030
gb|BF253643.2|BF253643 HVSMEf0001L12f Hordeum vulgare seedl... 98 9e-030
gb|BF257975.2|BF257975 HVSMEf0014G07f Hordeum vulgare seedl... 109 2e-029
gb|AL504860.1|AL504860 AL504860 Hordeum vulgare Barke roots... 129 3e-029
gb|AL505819.1|AL505819 AL505819 Hordeum vulgare Barke roots... 51 9e-029
gb|BG417465.1|BG417465 HVSMEk0017L14f Hordeum vulgare testa... 104 3e-028
gb|BM817329.1|BM817329 HC105E06_T3.ab1 HC Hordeum vulgare s... 75 4e-028
gb|BU974771.1|BU974771 HB29A24r BC Hordeum vulgare subsp. v... 99 5e-028
gb|CB877071.1|CB877071 HP03H10T HP Hordeum vulgare subsp. v... 99 5e-028
gb|CB879734.1|CB879734 HP03H10w HP Hordeum vulgare subsp. v... 99 6e-028
gb|BJ449787.1|BJ449787 BJ449787 K. Sato unpublished cDNA li... 100 6e-028
gb|AL500294.1|AL500294 AL500294 Hordeum vulgare Barke etiol... 100 1e-027
gb|AL504425.1|AL504425 AL504425 Hordeum vulgare Barke roots... 99 4e-027
gb|AV931170.1|AV931170 AV931170 K. Sato unpublished cDNA li... 92 9e-027
gb|AV918653.1|AV918653 AV918653 K. Sato unpublished cDNA li... 68 1e-026
gb|BJ457207.1|BJ457207 BJ457207 K. Sato unpublished cDNA li... 99 2e-026
gb|BF618543.2|BF618543 HVSMEc0006A01f Hordeum vulgare seedl... 67 2e-026
gb|BF254378.2|BF254378 HVSMEf0003N03f Hordeum vulgare seedl... 118 6e-026
gb|BF255254.2|BF255254 HVSMEf0006F22f Hordeum vulgare seedl... 117 1e-025
gb|AV929940.1|AV929940 AV929940 K. Sato unpublished cDNA li... 117 1e-025
gb|CD663159.1|CD663159 UCRHV18_04cc06_b1 Drought-stressed D... 100 1e-025
gb|BF256832.2|BF256832 HVSMEf0011C05f Hordeum vulgare seedl... 55 3e-025
gb|AL501306.1|AL501306 AL501306 Hordeum vulgare Barke roots... 110 1e-024
gb|BF628874.2|BF628874 HVSMEb0009A12f Hordeum vulgare seedl... 113 2e-024
gb|BF255884.2|BF255884 HVSMEf0008B14f Hordeum vulgare seedl... 73 2e-024
gb|AL501032.1|AL501032 AL501032 Hordeum vulgare Barke roots... 96 5e-024
gb|BF260237.3|BF260237 HVSMEf0021H13f Hordeum vulgare seedl... 85 8e-023
gb|AV919708.1|AV919708 AV919708 K. Sato unpublished cDNA li... 55 8e-023
gb|BQ659524.1|BQ659524 HE01L03u HE Hordeum vulgare subsp. v... 99 8e-023
gb|AL503613.1|AL503613 AL503613 Hordeum vulgare Barke roots... 59 3e-022
gb|BF256472.2|BF256472 HVSMEf0010B05f Hordeum vulgare seedl... 83 3e-022
gb|BF260422.2|BF260422 HVSMEf0021P06f Hordeum vulgare seedl... 93 4e-022
gb|BF264626.3|BF264626 HV_CEa0009O22f Hordeum vulgare seedl... 96 7e-022
gb|AV915283.1|AV915283 AV915283 K. Sato unpublished cDNA li... 57 9e-022
gb|BQ765323.1|BQ765323 EBro03_SQ006_H23_R root, 3 week, wat... 100 1e-021
gb|AL501672.1|AL501672 AL501672 Hordeum vulgare Barke roots... 104 1e-021
gb|BF254577.2|BF254577 HVSMEf0004G15f Hordeum vulgare seedl... 57 2e-021
gb|BF259032.2|BF259032 HVSMEf0017H09f Hordeum vulgare seedl... 49 2e-021
>gb|BM817346.1|BM817346 HC111F01_T3.ab1 HC Hordeum vulgare subsp. vulgare cDNA clone
HC111F01_T3.ab1 similar to Hexaprenyldihydroxybenzoate
methyltransferase,Apigenin 4'-O-methyltransferase,[Myelin
basic protein]-arginine N-methyltransferase,Catechol
O-methyltransferase,Glycoprotein-fucosylgalactoside
alpha-galactosyltransferase,, mRNA sequence
Length = 905
Score = 186 bits (401), Expect(5) = 3e-068
Identities = 75/100 (75%), Positives = 87/100 (87%)
Frame = +2 / +3
Query: 785 AQAVMLKLVLHFWSDDDCVKILELCRKAIPSREEGGKVIIIEILLGPYMGPVMYEAQLLM 964
+QAVMLKLVLH WSD+DCVKIL CR AIPS EEGGKVIII+I++GP + PVM+EAQLLM
Sbjct: 441 SQAVMLKLVLHHWSDEDCVKILSQCRDAIPSHEEGGKVIIIDIVVGPSLXPVMFEAQLLM 620
Query: 965 DMLMMVNTKGRQRGEDDWRHIFTKAGFSDYKVVKKIGARG 1084
DMLM+VNTK RQR E+DW +F KAGFSDYK+VKK+ ARG
Sbjct: 621 DMLMLVNTKSRQRTENDWHELFMKAGFSDYKIVKKLRARG 740
Score = 123 bits (263), Expect(3) = 2e-037
Identities = 63/98 (64%), Positives = 69/98 (70%)
Frame = -2 / -2
Query: 1083 PRAPIFLTTL*SEKPALVKMWRQSSSPRCLPLVLTIMSMSISSWASYMTGPMYGPRSISM 904
PRA FLT L*S PA +K QS S R V T MSMSI SWAS +TG GP +IS+
Sbjct: 739 PRARSFLTIL*SLNPAFMKSSCQSFSVR*RLFVFTSMSMSIKSWASNITGXNEGPTTISI 560
Query: 903 MITFPPSSREGMAFLHSSRILTQSSSLQKCRTSLSMTA 790
MITFPPSS EGMA LH +ILTQSSSLQ C TSLS+TA
Sbjct: 559 MITFPPSSCEGMASLH*DKILTQSSSLQWCSTSLSITA 446
Score = 61.1 bits (127), Expect(5) = 3e-068
Identities = 25/49 (51%), Positives = 30/49 (61%)
Frame = +2 / +3
Query: 470 QLPSPFEALHGVPLVHESTKXXXXXXXXXXXXGVAAHDNLAIGTVIREC 616
+LPSPFE +HG L EST G+AAHDNL IGT++REC
Sbjct: 102 RLPSPFEDVHGASLFDESTALLDKELDELVTEGLAAHDNLGIGTIMREC 248
Score = 47.3 bits (97), Expect(3) = 2e-037
Identities = 21/48 (43%), Positives = 24/48 (50%)
Frame = -2 / -2
Query: 615 HSRMTVPMARLSCAATPXXXXXXXXXXXXXXXSWTRGTPCRASNGDGS 472
HSRM VPM RLS AA+P S PC +SNGDG+
Sbjct: 247 HSRMIVPMPRLSWAASPSVTSSSSSLSRSAVLSSKSDAPCTSSNGDGN 104
Score = 32.7 bits (65), Expect(5) = 3e-068
Identities = 12/22 (54%), Positives = 14/22 (63%)
Frame = +2 / +3
Query: 623 DVFSGLRSLTYCCGRQGNASAA 688
D+F GL SLT CCG G + A
Sbjct: 252 DLFKGLESLTDCCGGDGTTARA 317
Score = 29.9 bits (59), Expect(5) = 3e-068
Identities = 10/18 (55%), Positives = 13/18 (72%)
Frame = +2 / +2
Query: 401 SRHYVEAGMSLADWFKKE 454
S Y EA + LADWF+K+
Sbjct: 38 SPFYTEAALGLADWFRKD 91
Score = 24.9 bits (48), Expect(5) = 3e-068
Identities = 10/16 (62%), Positives = 10/16 (62%)
Frame = +1 / +2
Query: 691 HRQGLPRHQVHRAQPS 738
H QG QVHRA PS
Sbjct: 317 HHQGTSACQVHRAGPS 364
Score = 24.4 bits (47), Expect(3) = 2e-037
Identities = 10/16 (62%), Positives = 12/16 (75%)
Frame = -1 / -1
Query: 736 KVEHGALDVWEGLDDG 689
KV+HGALD+ L DG
Sbjct: 362 KVQHGALDMRMCLGDG 315
>gb|BJ462654.1|BJ462654 BJ462654 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags29l10 5', mRNA sequence
Length = 720
Score = 204 bits (440), Expect(3) = 8e-068
Identities = 83/107 (77%), Positives = 95/107 (88%)
Frame = +2 / +2
Query: 785 AQAVMLKLVLHFWSDDDCVKILELCRKAIPSREEGGKVIIIEILLGPYMGPVMYEAQLLM 964
+Q VMLKLVLHFWSD+DCVKIL CRKAIP REEGGKVIIIEI++GP +GPVM+EAQLLM
Sbjct: 383 SQVVMLKLVLHFWSDEDCVKILAQCRKAIPPREEGGKVIIIEIVVGPSLGPVMFEAQLLM 562
Query: 965 DMLMMVNTKGRQRGEDDWRHIFTKAGFSDYKVVKKIGARGVIEVYP* 1105
DMLMMVNT+G QR E+ W +F KAGF+DYK+VKK+GAR VIEVYP*
Sbjct: 563 DMLMMVNTRGGQRDENHWCELFKKAGFTDYKIVKKLGARSVIEVYP* 703
Score = 151 bits (325), Expect(4) = 1e-041
Identities = 71/106 (66%), Positives = 80/106 (75%)
Frame = -2 / -1
Query: 1110 LAYG*TSMTPRAPIFLTTL*SEKPALVKMWRQSSSPRCLPLVLTIMSMSISSWASYMTGP 931
++YG*TSMT RAP F T L*S PA + Q S R PLV TIMS+SI SWAS +TGP
Sbjct: 708 ISYG*TSMTDRAPNFFTIL*SVNPAFLNSSHQ*FSSR*PPLVFTIMSISIRSWASNITGP 529
Query: 930 MYGPRSISMMITFPPSSREGMAFLHSSRILTQSSSLQKCRTSLSMT 793
GP +ISM+ITFPPSSR GMAFLH +RI TQSSSLQKC TSLS+T
Sbjct: 528 KEGPTTISMIITFPPSSRGGMAFLHWARIFTQSSSLQKCSTSLSIT 391
Score = 54.2 bits (112), Expect(3) = 8e-068
Identities = 23/47 (48%), Positives = 26/47 (55%)
Frame = +2 / +2
Query: 479 SPFEALHGVPLVHESTKXXXXXXXXXXXXGVAAHDNLAIGTVIRECG 619
SPFE GVPL E T G+AAHDNL I T++RECG
Sbjct: 53 SPFEEKFGVPLFDEKTALLDQELDSVCNQGLAAHDNLGIATILRECG 193
Score = 38.6 bits (78), Expect(3) = 8e-068
Identities = 15/28 (53%), Positives = 20/28 (71%)
Frame = +2 / +2
Query: 659 CGRQGNASAAAIVKAFPDIKCTVLNLPR 742
C +A A+VKA+P IKCTVL+LP+
Sbjct: 227 CCGGDGTTARALVKAYPHIKCTVLDLPK 310
Score = 26.7 bits (52), Expect(4) = 1e-041
Identities = 11/18 (61%), Positives = 13/18 (72%)
Frame = -1 / -3
Query: 736 KVEHGALDVWEGLDDGGR 683
KV+H ALDV LD+G R
Sbjct: 304 KVQHSALDVRISLDEGPR 251
Score = 26.3 bits (51), Expect(4) = 1e-041
Identities = 11/19 (57%), Positives = 13/19 (68%)
Frame = -2 / -1
Query: 621 APHSRMTVPMARLSCAATP 565
+PHSR V + RLS AA P
Sbjct: 195 SPHSRSMVAIPRLSWAAKP 139
Score = 22.1 bits (42), Expect(4) = 1e-041
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = -2 / -1
Query: 687 AALAFPCLPQQ*VSERRPLKTS 622
A P PQQ V E PLK S
Sbjct: 258 ALAVVPSPPQQSVRESSPLKMS 193
>gb|AL503330.1|AL503330 AL503330 Hordeum vulgare Barke roots Hordeum vulgare subsp. vulgare
cDNA clone HW01K22T 5', mRNA sequence
Length = 700
Score = 176 bits (379), Expect(5) = 2e-067
Identities = 69/94 (73%), Positives = 83/94 (88%)
Frame = +2 / +1
Query: 785 AQAVMLKLVLHFWSDDDCVKILELCRKAIPSREEGGKVIIIEILLGPYMGPVMYEAQLLM 964
AQAVMLKLVLH WSDDDCVKIL C+ AIPSREEGGKVI+I+I++ P +GPVM+EAQ LM
Sbjct: 418 AQAVMLKLVLHHWSDDDCVKILTQCKNAIPSREEGGKVIVIDIVVEPSLGPVMFEAQTLM 597
Query: 965 DMLMMVNTKGRQRGEDDWRHIFTKAGFSDYKVVK 1066
DMLM+V T+GRQR E+DWR +F KAGF+DYK++K
Sbjct: 598 DMLMLVFTRGRQRSENDWRDLFMKAGFTDYKIIK 699
Score = 122 bits (260), Expect(4) = 2e-035
Identities = 61/92 (66%), Positives = 65/92 (70%)
Frame = -2 / -3
Query: 1065 LTTL*SEKPALVKMWRQSSSPRCLPLVLTIMSMSISSWASYMTGPMYGPRSISMMITFPP 886
L L*S PA +K RQS S R PLV T MSMS+ WAS MTGP G +ISM ITFPP
Sbjct: 698 LMIL*SVNPAFMKRSRQSFSLR*RPLVNTSMSMSMRVWASNMTGPNDGSTTISMTITFPP 519
Query: 885 SSREGMAFLHSSRILTQSSSLQKCRTSLSMTA 790
SSREGMAFLH RI TQSSSLQ C TS S+TA
Sbjct: 518 SSREGMAFLHWVRIFTQSSSLQWCSTSFSITA 423
Score = 51.5 bits (106), Expect(5) = 2e-067
Identities = 22/55 (40%), Positives = 29/55 (52%)
Frame = +2 / +1
Query: 452 EEDEDRQLPSPFEALHGVPLVHESTKXXXXXXXXXXXXGVAAHDNLAIGTVIREC 616
++D +PS FE +H L EST G+ AHDNL IGT++REC
Sbjct: 61 KKDVTGPVPSVFEDVHSASLFDESTAALDPELDALVTDGLEAHDNLGIGTIMREC 225
Score = 36.8 bits (74), Expect(5) = 2e-067
Identities = 12/21 (57%), Positives = 17/21 (80%)
Frame = +2 / +1
Query: 392 GTVSRHYVEAGMSLADWFKKE 454
GT S HY+EA + +A+WFKK+
Sbjct: 7 GTRSPHYMEAALGMAEWFKKD 69
Score = 35.0 bits (70), Expect(4) = 2e-035
Identities = 17/48 (35%), Positives = 21/48 (43%)
Frame = -2 / -3
Query: 615 HSRMTVPMARLSCAATPXXXXXXXXXXXXXXXSWTRGTPCRASNGDGS 472
HSRM VP+ RLS A+ P S C +SN DG+
Sbjct: 224 HSRMMVPIPRLSWASRPSVTSASSSGSKAAVLSSKSDALCTSSNTDGT 81
Score = 35.0 bits (70), Expect(5) = 2e-067
Identities = 13/21 (61%), Positives = 17/21 (80%)
Frame = +2 / +1
Query: 680 SAAAIVKAFPDIKCTVLNLPR 742
+A AI KA P +KCTVL+LP+
Sbjct: 283 TARAITKAHPHVKCTVLDLPK 345
Score = 32.7 bits (65), Expect(5) = 2e-067
Identities = 12/22 (54%), Positives = 14/22 (63%)
Frame = +2 / +1
Query: 623 DVFSGLRSLTYCCGRQGNASAA 688
D+F GL SLT CCG G + A
Sbjct: 229 DLFKGLESLTDCCGGDGKTARA 294
Score = 24.9 bits (48), Expect(4) = 2e-035
Identities = 10/18 (55%), Positives = 13/18 (72%)
Frame = -1 / -2
Query: 736 KVEHGALDVWEGLDDGGR 683
+++HGALDV L DG R
Sbjct: 339 EIQHGALDVRVCLGDGPR 286
Score = 24.0 bits (46), Expect(4) = 2e-035
Identities = 11/22 (50%), Positives = 12/22 (54%)
Frame = -2 / -3
Query: 687 AALAFPCLPQQ*VSERRPLKTS 622
A FP PQQ V + PLK S
Sbjct: 293 ALAVFPSPPQQSVRDSSPLKRS 228
>gb|BF260650.2|BF260650 HVSMEf0022J06f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEf0022J06f, mRNA sequence
Length = 727
Score = 160 bits (343), Expect(5) = 3e-067
Identities = 67/89 (75%), Positives = 77/89 (86%)
Frame = +2 / +3
Query: 47 TAIVPTDAELLQAQADLWRHSLYYLTSMALKCAVELHIPTAIHNLGGSATLPDLVAALSL 226
T VP DAELLQAQADLWRHSLYYL+SMAL+CAVEL IPTAIH LGG A+LPDL+AALSL
Sbjct: 12 TIEVPADAELLQAQADLWRHSLYYLSSMALRCAVELEIPTAIHRLGGVASLPDLMAALSL 191
Query: 227 PAAKLPFLGRVMRLLVTSGVFASSDDVQY 313
P+ K+ FLGRVMR+LV SGVFA+ + +Y
Sbjct: 192 PSVKMSFLGRVMRVLVNSGVFAADNSSEY 278
Score = 120 bits (257), Expect(4) = 5e-037
Identities = 57/92 (61%), Positives = 63/92 (68%)
Frame = -1 / -3
Query: 322 VQPVLHVVGRREDARRDQQPHHAPEERELGRWQGQRGHEVRQRGRPA*VVDGGRDVELHR 143
+ PVL V ED R D+ H EER L R +GQRGH+VRQRG PA* VD RD+EL
Sbjct: 287 LHPVLGAVIGCEDTRVDEHAHDPAEERHLNRGKGQRGHQVRQRGDPA*AVDRSRDLELDG 108
Query: 142 ALERHGCQVVEAVAPQVGLRLQQLGVRGNYGG 47
A ERHG +VVEAVAPQV L LQQL VRGN G
Sbjct: 107 APERHGGEVVEAVAPQVCLCLQQLSVRGNLNG 12
Score = 113 bits (242), Expect(2) = 4e-029
Identities = 51/83 (61%), Positives = 59/83 (71%)
Frame = -2 / -1
Query: 291 AKTPDVTSSRITRPRNGSLAAGRDSAATRSGSVADPPRLWMAVGMWSSTAHLSAMDVR** 112
AKTP++TS+R+TRPR L GRDSAA RSGS A PPR W+AVG+ SSTAH SAM+ R**
Sbjct: 256 AKTPELTSTRMTRPRKDILTEGRDSAAIRSGSEATPPRRWIAVGISSSTAHRSAMEER** 77
Query: 111 RLWRHRXXXXXXXXXSVGTMAVA 43
RLWRHR S GT V+
Sbjct: 76 RLWRHRSACACSSSASAGTSMVS 8
Score = 77.1 bits (162), Expect(5) = 3e-067
Identities = 30/50 (60%), Positives = 37/50 (74%)
Frame = +2 / +3
Query: 311 YRLNPLSWLLVEGVESEDHTYQKYFVLGTVSRHYVEAGMSLADWFKKEED 460
YRL PLS +LV GV +++H QKYFVLG S HY EA + LADWFKK+ +
Sbjct: 291 YRLTPLSRVLVHGVLADEHHSQKYFVLGVTSPHYTEAALGLADWFKKDTE 440
Score = 36.8 bits (74), Expect(4) = 5e-037
Identities = 16/26 (61%), Positives = 16/26 (61%)
Frame = -2 / -1
Query: 450 FLNQSARDMPAST*WRETVPSTKYFW 373
FLNQSA AS * E P TKYFW
Sbjct: 430 FLNQSASPNAASV*CGEVTPRTKYFW 353
Score = 35.9 bits (72), Expect(5) = 3e-067
Identities = 12/17 (70%), Positives = 15/17 (88%)
Frame = +2 / +3
Query: 569 VAAHDNLAIGTVIRECG 619
+AAHDNL I T++RECG
Sbjct: 543 LAAHDNLGIATILRECG 593
Score = 35.0 bits (70), Expect(2) = 4e-029
Identities = 16/39 (41%), Positives = 24/39 (61%)
Frame = -1 / -3
Query: 442 PVGQGHAGLHVVAGDGAQHEVLLVGVVLRLHALHQQPGQ 326
PVGQ L VV +++++LL V++R A+HQ GQ
Sbjct: 422 PVGQPQRRLRVVRRGDSKNKILLAMVLVR*DAVHQNAGQ 306
Score = 32.2 bits (64), Expect(5) = 3e-067
Identities = 12/22 (54%), Positives = 15/22 (68%)
Frame = +2 / +3
Query: 659 CGRQGNASAAAIVKAFPDIKCT 724
C +A A+VKA+PDIKCT
Sbjct: 627 CWGGDGTTARALVKAYPDIKCT 692
Score = 30.9 bits (61), Expect(4) = 5e-037
Identities = 17/50 (34%), Positives = 21/50 (42%)
Frame = -2 / -1
Query: 621 APHSRMTVPMARLSCAATPXXXXXXXXXXXXXXXSWTRGTPCRASNGDGS 472
+PHSR V + RLS AA S GTP +S GD +
Sbjct: 595 SPHSRSMVAIPRLSWAANHWLQTESSSSSSRAVSSSKSGTPNFSSKGDNT 446
Score = 26.3 bits (51), Expect(5) = 3e-067
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = +2 / +3
Query: 452 EEDEDRQLPSPFEALHGVPLVHEST 526
++D + + SPFE GVPL E T
Sbjct: 426 KKDTELPVLSPFEEKFGVPLFDEET 500
Score = 22.6 bits (43), Expect(4) = 5e-037
Identities = 10/14 (71%), Positives = 11/14 (78%)
Frame = -2 / -1
Query: 720 HLMSGKALTMAAAL 679
HLMSG ALT A A+
Sbjct: 688 HLMSG*ALTRALAV 647
>gb|AL503735.1|AL503735 AL503735 Hordeum vulgare Barke roots Hordeum vulgare subsp. vulgare
cDNA clone HW03D24T 5', mRNA sequence
Length = 700
Score = 200 bits (431), Expect(4) = 1e-063
Identities = 80/108 (74%), Positives = 96/108 (88%)
Frame = +2 / +1
Query: 785 AQAVMLKLVLHFWSDDDCVKILELCRKAIPSREEGGKVIIIEILLGPYMGPVMYEAQLLM 964
AQAVMLKLVLH WSDDDCVKIL C+ AIPSREEGGKVI+I+I++ P +GPVM+EAQ LM
Sbjct: 235 AQAVMLKLVLHHWSDDDCVKILTQCKNAIPSREEGGKVIVIDIVVEPSLGPVMFEAQTLM 414
Query: 965 DMLMMVNTKGRQRGEDDWRHIFTKAGFSDYKVVKKIGARGVIEVYP*A 1108
DMLM+V T+GRQR E+DWR +F KAGF+DYK++KK+GARGVIEVY *+
Sbjct: 415 DMLMLVFTRGRQRSENDWRDLFMKAGFTDYKIIKKMGARGVIEVYK*S 558
Score = 147 bits (316), Expect(4) = 1e-039
Identities = 73/105 (69%), Positives = 77/105 (73%)
Frame = -2 / -3
Query: 1104 YG*TSMTPRAPIFLTTL*SEKPALVKMWRQSSSPRCLPLVLTIMSMSISSWASYMTGPMY 925
Y *TSMTPRAPIFL L*S PA +K RQS S R PLV T MSMS+ WAS MTGP
Sbjct: 554 YL*TSMTPRAPIFLMIL*SVNPAFMKRSRQSFSLR*RPLVNTSMSMSMRVWASNMTGPND 375
Query: 924 GPRSISMMITFPPSSREGMAFLHSSRILTQSSSLQKCRTSLSMTA 790
G +ISM ITFPPSSREGMAFLH RI TQSSSLQ C TS S+TA
Sbjct: 374 GSTTISMTITFPPSSREGMAFLHWVRIFTQSSSLQWCSTSFSITA 240
Score = 35.0 bits (70), Expect(4) = 1e-063
Identities = 13/21 (61%), Positives = 17/21 (80%)
Frame = +2 / +1
Query: 680 SAAAIVKAFPDIKCTVLNLPR 742
+A AI KA P +KCTVL+LP+
Sbjct: 100 TARAITKAHPHVKCTVLDLPK 162
Score = 33.1 bits (66), Expect(4) = 1e-063
Identities = 11/14 (78%), Positives = 13/14 (92%)
Frame = +2 / +1
Query: 575 AHDNLAIGTVIREC 616
AHDNL IGT++REC
Sbjct: 1 AHDNLGIGTIMREC 42
Score = 32.7 bits (65), Expect(4) = 1e-063
Identities = 12/22 (54%), Positives = 14/22 (63%)
Frame = +2 / +1
Query: 623 DVFSGLRSLTYCCGRQGNASAA 688
D+F GL SLT CCG G + A
Sbjct: 46 DLFKGLESLTDCCGGDGKTARA 111
Score = 24.9 bits (48), Expect(4) = 1e-039
Identities = 10/18 (55%), Positives = 13/18 (72%)
Frame = -1 / -2
Query: 736 KVEHGALDVWEGLDDGGR 683
+++HGALDV L DG R
Sbjct: 156 EIQHGALDVRVCLGDGPR 103
Score = 24.0 bits (46), Expect(4) = 1e-039
Identities = 11/22 (50%), Positives = 12/22 (54%)
Frame = -2 / -3
Query: 687 AALAFPCLPQQ*VSERRPLKTS 622
A FP PQQ V + PLK S
Sbjct: 110 ALAVFPSPPQQSVRDSSPLKRS 45
Score = 23.5 bits (45), Expect(4) = 1e-039
Identities = 9/12 (75%), Positives = 10/12 (83%)
Frame = -2 / -3
Query: 615 HSRMTVPMARLS 580
HSRM VP+ RLS
Sbjct: 41 HSRMMVPIPRLS 6
>gb|BF620538.3|BF620538 HVSMEc0020C24f Hordeum vulgare seedling shoot EST library
HVcDNA0003 (Etiolated and unstressed) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEc0020C24f, mRNA sequence
Length = 673
Score = 198 bits (426), Expect(3) = 2e-063
Identities = 83/136 (61%), Positives = 105/136 (77%)
Frame = +2 / +2
Query: 47 TAIVPTDAELLQAQADLWRHSLYYLTSMALKCAVELHIPTAIHNLGGSATLPDLVAALSL 226
T VPTDA+L+QAQADLWRHSL +LT+MAL+CAV+L IPTAIH LGG+ ++ DLV ALSL
Sbjct: 14 TMAVPTDAQLIQAQADLWRHSLCHLTAMALRCAVQLGIPTAIHRLGGTTSVSDLVTALSL 193
Query: 227 PAAKLPFLGRVMRLLVTSGVFASSDDVQYRLNPLSWLLVEGVESEDHTYQKYFVLGTVSR 406
P +K+P+LGRV+RLL TSG AS + Y L PLS+LLV+GV + QK +L T SR
Sbjct: 194 PQSKMPYLGRVLRLLATSGALASPKEGTYSLVPLSYLLVDGVFIDGEASQKALLLSTTSR 373
Query: 407 HYVEAGMSLADWFKKE 454
+ +EA + LADWFKK+
Sbjct: 374 YNIEAALGLADWFKKD 421
Score = 51.5 bits (106), Expect(3) = 2e-063
Identities = 21/47 (44%), Positives = 26/47 (55%)
Frame = +2 / +2
Query: 476 PSPFEALHGVPLVHESTKXXXXXXXXXXXXGVAAHDNLAIGTVIREC 616
PSPFE +HG L ES +AAHD+L IGT++REC
Sbjct: 434 PSPFEDVHGATLCEESMALLDPESDELFHEALAAHDHLGIGTILREC 574
Score = 32.7 bits (65), Expect(3) = 2e-063
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = +2 / +2
Query: 623 DVFSGLRSLTYCCGRQGNASAAAI 694
D+F G++SLT CCG G + A +
Sbjct: 578 DLFKGVQSLTDCCGGDGTTARAIV 649
>gb|AV926997.1|AV926997 AV926997 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp.
vulgare cDNA clone basd26g01 5', mRNA sequence
Length = 672
Score = 198 bits (427), Expect(3) = 9e-063
Identities = 83/136 (61%), Positives = 104/136 (76%)
Frame = +2 / +3
Query: 47 TAIVPTDAELLQAQADLWRHSLYYLTSMALKCAVELHIPTAIHNLGGSATLPDLVAALSL 226
T VPTDA+L+QAQADLWRHSL +L ++AL+CAV+L IPTAIH LGG+ ++ DLV ALSL
Sbjct: 45 TMAVPTDAQLIQAQADLWRHSLCHLRAIALRCAVQLGIPTAIHRLGGTTSVSDLVTALSL 224
Query: 227 PAAKLPFLGRVMRLLVTSGVFASSDDVQYRLNPLSWLLVEGVESEDHTYQKYFVLGTVSR 406
P +K+P+LGRV+RLL SG AS + Y L PLS+LLV+GV + QK VL T SR
Sbjct: 225 PQSKMPYLGRVLRLLAASGALASPKEGTYSLVPLSYLLVDGVFIDGEASQKAIVLTTTSR 404
Query: 407 HYVEAGMSLADWFKKE 454
HY+EA + LADWFKK+
Sbjct: 405 HYIEAALGLADWFKKD 452
Score = 51.5 bits (106), Expect(3) = 9e-063
Identities = 21/47 (44%), Positives = 26/47 (55%)
Frame = +2 / +3
Query: 476 PSPFEALHGVPLVHESTKXXXXXXXXXXXXGVAAHDNLAIGTVIREC 616
PSPFE +HG L ES +AAHD+L IGT++REC
Sbjct: 465 PSPFEDVHGATLFEESMALLDPESDKMFHEALAAHDHLGIGTILREC 605
Score = 30.4 bits (60), Expect(3) = 9e-063
Identities = 10/20 (50%), Positives = 14/20 (70%)
Frame = +2 / +3
Query: 623 DVFSGLRSLTYCCGRQGNAS 682
D+F G++SLT CCG G +
Sbjct: 609 DLFKGVQSLTDCCGGDGTTA 668
>gb|AV925342.1|AV925342 AV925342 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp.
vulgare cDNA clone basd22m18 5', mRNA sequence
Length = 665
Score = 198 bits (427), Expect(3) = 9e-063
Identities = 83/136 (61%), Positives = 104/136 (76%)
Frame = +2 / +1
Query: 47 TAIVPTDAELLQAQADLWRHSLYYLTSMALKCAVELHIPTAIHNLGGSATLPDLVAALSL 226
T VPTDA+L+QAQADLWRHSL +L ++AL+CAV+L IPTAIH LGG+ ++ DLV ALSL
Sbjct: 37 TMAVPTDAQLIQAQADLWRHSLCHLRAIALRCAVQLGIPTAIHRLGGTTSVSDLVTALSL 216
Query: 227 PAAKLPFLGRVMRLLVTSGVFASSDDVQYRLNPLSWLLVEGVESEDHTYQKYFVLGTVSR 406
P +K+P+LGRV+RLL SG AS + Y L PLS+LLV+GV + QK VL T SR
Sbjct: 217 PQSKMPYLGRVLRLLAASGALASPKEGTYSLVPLSYLLVDGVFIDGEASQKAIVLTTTSR 396
Query: 407 HYVEAGMSLADWFKKE 454
HY+EA + LADWFKK+
Sbjct: 397 HYIEAALGLADWFKKD 444
Score = 51.5 bits (106), Expect(3) = 9e-063
Identities = 21/47 (44%), Positives = 26/47 (55%)
Frame = +2 / +1
Query: 476 PSPFEALHGVPLVHESTKXXXXXXXXXXXXGVAAHDNLAIGTVIREC 616
PSPFE +HG L ES +AAHD+L IGT++REC
Sbjct: 457 PSPFEDVHGATLFEESMALLDPESDKMFHEALAAHDHLGIGTILREC 597
Score = 30.4 bits (60), Expect(3) = 9e-063
Identities = 10/20 (50%), Positives = 14/20 (70%)
Frame = +2 / +1
Query: 623 DVFSGLRSLTYCCGRQGNAS 682
D+F G++SLT CCG G +
Sbjct: 601 DLFKGVQSLTDCCGGDGTTA 660
>gb|BF259091.3|BF259091 HVSMEf0017K20f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEf0017K20f, mRNA sequence
Length = 796
Score = 160 bits (343), Expect(4) = 2e-062
Identities = 67/89 (75%), Positives = 77/89 (86%)
Frame = +2 / +1
Query: 47 TAIVPTDAELLQAQADLWRHSLYYLTSMALKCAVELHIPTAIHNLGGSATLPDLVAALSL 226
T VP DAELLQAQADLWRHSLYYL+SMAL+CAVEL IPTAIH LGG A+LPDL+AALSL
Sbjct: 64 TIEVPADAELLQAQADLWRHSLYYLSSMALRCAVELEIPTAIHRLGGVASLPDLMAALSL 243
Query: 227 PAAKLPFLGRVMRLLVTSGVFASSDDVQY 313
P+ K+ FLGRVMR+LV SGVFA+ + +Y
Sbjct: 244 PSVKMSFLGRVMRVLVNSGVFAADNSSEY 330
Score = 116 bits (249), Expect(3) = 2e-033
Identities = 56/89 (62%), Positives = 61/89 (68%)
Frame = -1 / -2
Query: 313 VLHVVGRREDARRDQQPHHAPEERELGRWQGQRGHEVRQRGRPA*VVDGGRDVELHRALE 134
VL V ED R D+ H EER L R +GQRGH+VRQRG PA* VD RD+EL A E
Sbjct: 330 VLGAVIGCEDTRVDEHAHDPAEERHLNRGKGQRGHQVRQRGDPA*AVDRSRDLELDGAPE 151
Query: 133 RHGCQVVEAVAPQVGLRLQQLGVRGNYGG 47
RHG +VVEAVAPQV L LQQL VRGN G
Sbjct: 150 RHGGEVVEAVAPQVCLCLQQLSVRGNLNG 64
Score = 113 bits (241), Expect(2) = 1e-028
Identities = 51/82 (62%), Positives = 58/82 (70%)
Frame = -2 / -3
Query: 291 AKTPDVTSSRITRPRNGSLAAGRDSAATRSGSVADPPRLWMAVGMWSSTAHLSAMDVR** 112
AKTP++TS+R+TRPR L GRDSAA RSGS A PPR W+AVG+ SSTAH SAM+ R**
Sbjct: 308 AKTPELTSTRMTRPRKDILTEGRDSAAIRSGSEATPPRRWIAVGISSSTAHRSAMEER** 129
Query: 111 RLWRHRXXXXXXXXXSVGTMAV 46
RLWRHR S GT V
Sbjct: 128 RLWRHRSACACSSSASAGTSMV 63
Score = 79.4 bits (167), Expect(4) = 2e-062
Identities = 32/56 (57%), Positives = 39/56 (69%)
Frame = +2 / +1
Query: 311 YRLNPLSWLLVEGVESEDHTYQKYFVLGTVSRHYVEAGMSLADWFKKEEDEDRQLP 478
YRL PLS +LV GV +++H QKYFVLG S HY EA + LADWFKK+ + R P
Sbjct: 343 YRLTPLSRVLVHGVLADEHHSQKYFVLGVTSPHYTEAALGLADWFKKDTELPRVAP 510
Score = 41.4 bits (84), Expect(3) = 2e-033
Identities = 20/41 (48%), Positives = 22/41 (53%)
Frame = -2 / -3
Query: 495 RASNGDGSWRXXXXSFLNQSARDMPAST*WRETVPSTKYFW 373
R S+ G+ SFLNQSA AS * E P TKYFW
Sbjct: 527 RTSSSKGATLGSSVSFLNQSASPNAASV*CGEVTPRTKYFW 405
Score = 34.1 bits (68), Expect(2) = 1e-028
Identities = 16/39 (41%), Positives = 23/39 (58%)
Frame = -1 / -2
Query: 442 PVGQGHAGLHVVAGDGAQHEVLLVGVVLRLHALHQQPGQ 326
PVGQ L VV ++++LL V++R A+HQ GQ
Sbjct: 474 PVGQPQRRLRVVRRGDPKNKILLAMVLVR*DAVHQNAGQ 358
Score = 32.2 bits (64), Expect(4) = 2e-062
Identities = 12/17 (70%), Positives = 13/17 (76%)
Frame = +2 / +1
Query: 569 VAAHDNLAIGTVIRECG 619
VAAHDNL I +RECG
Sbjct: 595 VAAHDNLGIAPKLRECG 645
Score = 25.8 bits (50), Expect(4) = 2e-062
Identities = 10/22 (45%), Positives = 11/22 (50%)
Frame = +2 / +1
Query: 623 DVFSGLRSLTYCCGRQGNASAA 688
D+ GL SLT CC G A
Sbjct: 646 DILKGLDSLTDCCSGHGTKPRA 711
Score = 22.6 bits (43), Expect(3) = 2e-033
Identities = 10/18 (55%), Positives = 12/18 (66%)
Frame = -2 / -3
Query: 621 APHSRMTVPMARLSCAAT 568
+PHSR + RLS AAT
Sbjct: 647 SPHSRSLGAIPRLSWAAT 594
>gb|BF256951.3|BF256951 HVSMEf0011H09f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEf0011H09f, mRNA sequence
Length = 819
Score = 154 bits (330), Expect(3) = 4e-061
Identities = 63/80 (78%), Positives = 72/80 (90%)
Frame = +2 / +2
Query: 56 VPTDAELLQAQADLWRHSLYYLTSMALKCAVELHIPTAIHNLGGSATLPDLVAALSLPAA 235
VPTDAELLQAQADLWRH+LYYLTSM L+CAV+L IPTA+HNLGG +LPDL A LS+PA+
Sbjct: 77 VPTDAELLQAQADLWRHTLYYLTSMGLRCAVKLGIPTAMHNLGGVTSLPDLAAVLSIPAS 256
Query: 236 KLPFLGRVMRLLVTSGVFAS 295
K PFLGR+MR LVTSGVFA+
Sbjct: 257 KQPFLGRLMRALVTSGVFAA 316
Score = 108 bits (230), Expect(3) = 1e-032
Identities = 51/79 (64%), Positives = 55/79 (69%)
Frame = -2 / -1
Query: 291 AKTPDVTSSRITRPRNGSLAAGRDSAATRSGSVADPPRLWMAVGMWSSTAHLSAMDVR** 112
AKTP+VTS+RI RPRNG L AG DS A RSGS PPRL +AVGM S TA S MDVR**
Sbjct: 312 AKTPEVTSARIRRPRNGCLLAGMDSTAARSGSEVTPPRLCIAVGMPSLTAQRSPMDVR** 133
Query: 111 RLWRHRXXXXXXXXXSVGT 55
R+WRHR SVGT
Sbjct: 132 RVWRHRSA*ACSSSASVGT 76
Score = 69.3 bits (145), Expect(3) = 4e-061
Identities = 26/48 (54%), Positives = 37/48 (77%)
Frame = +2 / +2
Query: 311 YRLNPLSWLLVEGVESEDHTYQKYFVLGTVSRHYVEAGMSLADWFKKE 454
+RLNPLS +LV+GV++E+H Q FVL S HY+EA + +A+WFKK+
Sbjct: 347 FRLNPLSRVLVDGVDAEEHHSQTSFVLAGTSPHYMEAALGMAEWFKKD 490
Score = 51.5 bits (106), Expect(3) = 4e-061
Identities = 22/55 (40%), Positives = 29/55 (52%)
Frame = +2 / +2
Query: 452 EEDEDRQLPSPFEALHGVPLVHESTKXXXXXXXXXXXXGVAAHDNLAIGTVIREC 616
++D +PS FE +H L EST G+ AHDNL IGT++REC
Sbjct: 482 KKDVTGPVPSVFEDVHSASLFDESTAALDPELDALVTDGLEAHDNLGIGTIMREC 646
Score = 35.4 bits (71), Expect(3) = 1e-032
Identities = 15/42 (35%), Positives = 21/42 (50%)
Frame = -1 / -3
Query: 442 PVGQGHAGLHVVAGDGAQHEVLLVGVVLRLHALHQQPGQRVQ 317
P+G G HVV +HE L V R+ +HQ G+ V+
Sbjct: 478 PLGHPQRGFHVVRRRPGEHEGRLAVVFFRIDTIHQDTGEWVE 353
Score = 35.0 bits (70), Expect(3) = 1e-032
Identities = 17/48 (35%), Positives = 21/48 (43%)
Frame = -2 / -1
Query: 615 HSRMTVPMARLSCAATPXXXXXXXXXXXXXXXSWTRGTPCRASNGDGS 472
HSRM VP+ RLS A+ P S C +SN DG+
Sbjct: 645 HSRMMVPIPRLSWASRPSVTSASSSGSKAAVLSSKSDALCTSSNTDGT 502
>gb|BF620185.2|BF620185 HVSMEc0018M19f Hordeum vulgare seedling shoot EST library
HVcDNA0003 (Etiolated and unstressed) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEc0018M19f, mRNA sequence
Length = 601
Score = 201 bits (433), Expect(2) = 4e-060
Identities = 84/136 (61%), Positives = 105/136 (77%)
Frame = +2 / +1
Query: 47 TAIVPTDAELLQAQADLWRHSLYYLTSMALKCAVELHIPTAIHNLGGSATLPDLVAALSL 226
T VPTDA+L+QAQADLWRHSL +LT++AL+CAV+L IPTAIH LGG+ ++ DLV ALSL
Sbjct: 28 TMAVPTDAQLIQAQADLWRHSLCHLTAIALRCAVQLGIPTAIHRLGGTTSVSDLVTALSL 207
Query: 227 PAAKLPFLGRVMRLLVTSGVFASSDDVQYRLNPLSWLLVEGVESEDHTYQKYFVLGTVSR 406
P +K+P+LGRV+RLL SG AS + Y L PLS+LLV+GV + QK VL T SR
Sbjct: 208 PQSKMPYLGRVLRLLAASGALASPKEGTYSLVPLSYLLVDGVFIDGEASQKAIVLTTTSR 387
Query: 407 HYVEAGMSLADWFKKE 454
HY+EA + LADWFKK+
Sbjct: 388 HYIEAALGLADWFKKD 435
Score = 51.5 bits (106), Expect(2) = 4e-060
Identities = 21/47 (44%), Positives = 26/47 (55%)
Frame = +2 / +1
Query: 476 PSPFEALHGVPLVHESTKXXXXXXXXXXXXGVAAHDNLAIGTVIREC 616
PSPFE +HG L ES +AAHD+L IGT++REC
Sbjct: 448 PSPFEDVHGATLFEESMALLDPESDKMFHEALAAHDHLGIGTILREC 588
>gb|BF258405.3|BF258405 HVSMEf0015K05f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEf0015K05f, mRNA sequence
Length = 894
Score = 182 bits (392), Expect(4) = 7e-060
Identities = 79/136 (58%), Positives = 100/136 (73%)
Frame = +2 / +3
Query: 47 TAIVPTDAELLQAQADLWRHSLYYLTSMALKCAVELHIPTAIHNLGGSATLPDLVAALSL 226
T VPTDA+L++AQADL RHSL YLTSMAL+CA+EL IPTAI LGG+A+LPDL+AALSL
Sbjct: 42 TMTVPTDAQLIKAQADLQRHSLTYLTSMALRCAIELGIPTAIQRLGGTASLPDLMAALSL 221
Query: 227 PAAKLPFLGRVMRLLVTSGVFASSDDVQYRLNPLSWLLVEGVESEDHTYQKYFVLGTVSR 406
P K PFL RV+RLL S A ++ Y L PLS++LV+GV + Q F L SR
Sbjct: 222 PPPKAPFLSRVLRLLAKSDALACTEAGIYSLTPLSYILVDGVLIDGEARQVTFPLAVTSR 401
Query: 407 HYVEAGMSLADWFKKE 454
+++E+G+ LADWFK +
Sbjct: 402 YHMESGLGLADWFKND 449
Score = 103 bits (219), Expect(3) = 3e-028
Identities = 51/86 (59%), Positives = 57/86 (66%)
Frame = -2 / -3
Query: 303 SSDDAKTPDVTSSRITRPRNGSLAAGRDSAATRSGSVADPPRLWMAVGMWSSTAHLSAMD 124
+S A+ D+ SSR TR RNG+L G DSAA RSG A PPR W+AVGM SS AHLSAMD
Sbjct: 298 ASVHARASDLASSRRTRLRNGALGGGSDSAAIRSGKDAVPPRRWIAVGMPSSMAHLSAMD 119
Query: 123 VR**RLWRHRXXXXXXXXXSVGTMAV 46
VR* RLWR R SVGT+ V
Sbjct: 118 VR*VRLWRCRSACALISWASVGTVIV 41
Score = 45.1 bits (92), Expect(4) = 7e-060
Identities = 19/48 (39%), Positives = 25/48 (52%)
Frame = +2 / +3
Query: 473 LPSPFEALHGVPLVHESTKXXXXXXXXXXXXGVAAHDNLAIGTVIREC 616
+PSPFE +H ES +AAHD++ IGTV+REC
Sbjct: 462 VPSPFEHVHAAAPFDESMTLLDPETDKLFYEALAAHDHMXIGTVLREC 605
Score = 36.3 bits (73), Expect(4) = 7e-060
Identities = 17/33 (51%), Positives = 21/33 (63%)
Frame = +2 / +2
Query: 785 AQAVMLKLVLHFWSDDDCVKILELCRKAIPSRE 883
AQAVMLK VLHF S++D + L + K S E
Sbjct: 788 AQAVMLKAVLHFLSEEDGITSLLIAEKPYLSEE 886
Score = 35.9 bits (72), Expect(3) = 3e-028
Identities = 17/34 (50%), Positives = 22/34 (64%)
Frame = -2 / -1
Query: 891 PPSSREGMAFLHSSRILTQSSSLQKCRTSLSMTA 790
P S E F S+ + SSSL+KCRT+LS+TA
Sbjct: 894 PSISSERYGFSAMSKDVIPSSSLKKCRTALSITA 793
Score = 30.4 bits (60), Expect(3) = 3e-028
Identities = 16/33 (48%), Positives = 18/33 (54%)
Frame = -2 / -3
Query: 480 DGSWRXXXXSFLNQSARDMPAST*WRETVPSTK 382
+G SFLNQSAR P S *+RE S K
Sbjct: 475 NGDGTGSKLSFLNQSARPRPDSM*YREVTASGK 377
Score = 24.9 bits (48), Expect(4) = 7e-060
Identities = 10/13 (76%), Positives = 10/13 (76%)
Frame = +2 / +3
Query: 683 AAAIVKAFPDIKC 721
A AIVKA P IKC
Sbjct: 657 ARAIVKALPHIKC 695
>gb|AV913354.1|AV913354 AV913354 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags21m09 5', mRNA sequence
Length = 630
Score = 199 bits (429), Expect(2) = 1e-059
Identities = 84/142 (59%), Positives = 106/142 (74%)
Frame = +2 / +3
Query: 29 LTTIMATAIVPTDAELLQAQADLWRHSLYYLTSMALKCAVELHIPTAIHNLGGSATLPDL 208
+T T VPTDA+L+QAQADLWRHSL +L ++AL+CAV+L IPTAIH LGG+ ++ DL
Sbjct: 39 MTAQAPTMAVPTDAQLIQAQADLWRHSLCHLRAIALRCAVQLGIPTAIHRLGGTTSVSDL 218
Query: 209 VAALSLPAAKLPFLGRVMRLLVTSGVFASSDDVQYRLNPLSWLLVEGVESEDHTYQKYFV 388
V ALSLP +K+P+LGRV+RLL SG AS + Y L PLS+LLV+GV + QK V
Sbjct: 219 VTALSLPQSKMPYLGRVLRLLAASGALASPKEGTYSLVPLSYLLVDGVFIDGEASQKAIV 398
Query: 389 LGTVSRHYVEAGMSLADWFKKE 454
L T SRHY+EA + LADWFKK+
Sbjct: 399 LTTTSRHYIEAALGLADWFKKD 464
Score = 51.5 bits (106), Expect(2) = 1e-059
Identities = 21/47 (44%), Positives = 26/47 (55%)
Frame = +2 / +3
Query: 476 PSPFEALHGVPLVHESTKXXXXXXXXXXXXGVAAHDNLAIGTVIREC 616
PSPFE +HG L ES +AAHD+L IGT++REC
Sbjct: 477 PSPFEDVHGATLFEESMALLDPESDKMFHEALAAHDHLGIGTILREC 617
>gb|AV926805.1|AV926805 AV926805 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp.
vulgare cDNA clone basd23n09 5', mRNA sequence
Length = 607
Score = 198 bits (427), Expect(2) = 3e-059
Identities = 83/136 (61%), Positives = 104/136 (76%)
Frame = +2 / +1
Query: 47 TAIVPTDAELLQAQADLWRHSLYYLTSMALKCAVELHIPTAIHNLGGSATLPDLVAALSL 226
T VPTDA+L+QAQADLWRHSL +L ++AL+CAV+L IPTAIH LGG+ ++ DLV ALSL
Sbjct: 37 TMAVPTDAQLIQAQADLWRHSLCHLRAIALRCAVQLGIPTAIHRLGGTTSVSDLVTALSL 216
Query: 227 PAAKLPFLGRVMRLLVTSGVFASSDDVQYRLNPLSWLLVEGVESEDHTYQKYFVLGTVSR 406
P +K+P+LGRV+RLL SG AS + Y L PLS+LLV+GV + QK VL T SR
Sbjct: 217 PQSKMPYLGRVLRLLAASGALASPKEGTYSLVPLSYLLVDGVFIDGEASQKAIVLTTTSR 396
Query: 407 HYVEAGMSLADWFKKE 454
HY+EA + LADWFKK+
Sbjct: 397 HYIEAALGLADWFKKD 444
Score = 51.5 bits (106), Expect(2) = 3e-059
Identities = 21/47 (44%), Positives = 26/47 (55%)
Frame = +2 / +1
Query: 476 PSPFEALHGVPLVHESTKXXXXXXXXXXXXGVAAHDNLAIGTVIREC 616
PSPFE +HG L ES +AAHD+L IGT++REC
Sbjct: 457 PSPFEDVHGATLFEESMALLDPESDKMFHEALAAHDHLGIGTILREC 597
>gb|AV922821.1|AV922821 AV922821 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp.
vulgare cDNA clone basd2i01 5', mRNA sequence
Length = 598
Score = 198 bits (427), Expect(2) = 3e-059
Identities = 83/136 (61%), Positives = 104/136 (76%)
Frame = +2 / +2
Query: 47 TAIVPTDAELLQAQADLWRHSLYYLTSMALKCAVELHIPTAIHNLGGSATLPDLVAALSL 226
T VPTDA+L+QAQADLWRHSL +L ++AL+CAV+L IPTAIH LGG+ ++ DLV ALSL
Sbjct: 26 TMAVPTDAQLIQAQADLWRHSLCHLRAIALRCAVQLGIPTAIHRLGGTTSVSDLVTALSL 205
Query: 227 PAAKLPFLGRVMRLLVTSGVFASSDDVQYRLNPLSWLLVEGVESEDHTYQKYFVLGTVSR 406
P +K+P+LGRV+RLL SG AS + Y L PLS+LLV+GV + QK VL T SR
Sbjct: 206 PQSKMPYLGRVLRLLAASGALASPKEGTYSLVPLSYLLVDGVFIDGEASQKAIVLTTTSR 385
Query: 407 HYVEAGMSLADWFKKE 454
HY+EA + LADWFKK+
Sbjct: 386 HYIEAALGLADWFKKD 433
Score = 51.5 bits (106), Expect(2) = 3e-059
Identities = 21/47 (44%), Positives = 26/47 (55%)
Frame = +2 / +2
Query: 476 PSPFEALHGVPLVHESTKXXXXXXXXXXXXGVAAHDNLAIGTVIREC 616
PSPFE +HG L ES +AAHD+L IGT++REC
Sbjct: 446 PSPFEDVHGATLFEESMALLDPESDKMFHEALAAHDHLGIGTILREC 586
>gb|BF260951.2|BF260951 HVSMEf0023F23f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEf0023F23f, mRNA sequence
Length = 824
Score = 187 bits (402), Expect(4) = 6e-059
Identities = 82/135 (60%), Positives = 98/135 (72%)
Frame = +2 / +2
Query: 56 VPTDAELLQAQADLWRHSLYYLTSMALKCAVELHIPTAIHNLGGSATLPDLVAALSLPAA 235
VPTDAELLQAQ+DLWRH L YLT M+L+CAV+L +PT IH LGG+ + +LVAALSLPA
Sbjct: 80 VPTDAELLQAQSDLWRHRLCYLTPMSLRCAVDLGVPTVIHRLGGAVSPSELVAALSLPAF 259
Query: 236 KLPFLGRVMRLLVTSGVFASSDDVQYRLNPLSWLLVEGVESEDHTYQKYFVLGTVSRHYV 415
KLPFL R++R L T GVF +D YRLNPL +LLV+GV + Q V R+YV
Sbjct: 260 KLPFLARLLRQLGTEGVFTFTDARTYRLNPL*YLLVDGVRMDGDASQTAIVRAAD*RYYV 439
Query: 416 EAGMSLADWFKKEED 460
EA M LADWFKK+ D
Sbjct: 440 EAAMGLADWFKKDFD 484
Score = 120 bits (256), Expect(2) = 1e-026
Identities = 61/129 (47%), Positives = 76/129 (58%)
Frame = -1 / -2
Query: 442 PVGQGHAGLHVVAGDGAQHEVLLVGVVLRLHALHQQPGQRVQPVLHVVGRREDARRDQQP 263
PVGQ H GLHV+A H+ L GV + +A+H+Q +RV+ V VG EDA R
Sbjct: 466 PVGQAHGGLHVIALVRGAHDGRLAGVAVHAYAVHEQVLERVEAVRSGVGEGEDALRA*LA 287
Query: 262 HHAPEERELGRWQGQRGHEVRQRGRPA*VVDGGRDVELHRALERHGCQVVEAVAPQVGLR 83
A EER+L R QGQ G + + A VD D E+ A ERHG +V E VAPQVGLR
Sbjct: 286 QQAGEERQLERGQGQGGDQFGRGHGAAEAVDDRGDAEVDGAAERHGREVAEPVAPQVGLR 107
Query: 82 LQQLGVRGN 56
L+QL V G+
Sbjct: 106 LEQLRVGGD 80
Score = 91.3 bits (193), Expect(2) = 6e-021
Identities = 47/87 (54%), Positives = 48/87 (55%)
Frame = -2 / -3
Query: 315 RYCTSSDDAKTPDVTSSRITRPRNGSLAAGRDSAATRSGSVADPPRLWMAVGMWSSTAHL 136
RY +S KTP V S R R RNGSL AGRD AAT S PPR WM VG STA
Sbjct: 339 RYVLASVKVKTPSVPSWRSRRARNGSLNAGRDRAATSSDGDTAPPRRWMTVGTPRSTAQR 160
Query: 135 SAMDVR**RLWRHRXXXXXXXXXSVGT 55
S M VR* LWRHR SVGT
Sbjct: 159 SDMGVR*QSLWRHRSDCAWSSSASVGT 79
Score = 35.4 bits (71), Expect(4) = 6e-059
Identities = 16/28 (57%), Positives = 17/28 (60%)
Frame = +2 / +2
Query: 659 CGRQGNASAAAIVKAFPDIKCTVLNLPR 742
CG A+A I KAFP I CTVL L R
Sbjct: 671 CGGGDGATARFIEKAFPHINCTVLELLR 754
Score = 35.0 bits (70), Expect(4) = 6e-059
Identities = 15/32 (46%), Positives = 16/32 (50%)
Frame = +3 / +3
Query: 495 CTGCPSSTRAPSCWTRSWTGSWRKAWPRTTTW 590
CT PS RA W+R WT S TTTW
Sbjct: 513 CTAPPSLRRAWRSWSRRWTRSSTTPMLPTTTW 608
Score = 29.9 bits (59), Expect(2) = 6e-021
Identities = 15/26 (57%), Positives = 16/26 (61%)
Frame = -2 / -3
Query: 450 FLNQSARDMPAST*WRETVPSTKYFW 373
FLNQSAR M AST* R + T W
Sbjct: 474 FLNQSARPMAAST**R*SAARTMAVW 397
Score = 28.1 bits (55), Expect(4) = 6e-059
Identities = 9/15 (60%), Positives = 13/15 (86%)
Frame = +2 / +2
Query: 572 AAHDNLAIGTVIREC 616
AAHD++ IG V+R+C
Sbjct: 590 AAHDHMEIGPVLRQC 634
Score = 23.5 bits (45), Expect(2) = 1e-026
Identities = 11/20 (55%), Positives = 13/20 (65%)
Frame = -1 / -2
Query: 736 KVEHGALDVWEGLDDGGRAG 677
K EHGA+ V EGL + R G
Sbjct: 748 KFEHGAVYVREGLFNEPRRG 689
>gb|BF260366.2|BF260366 HVSMEf0021M22f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEf0021M22f, mRNA sequence
Length = 788
Score = 152 bits (326), Expect(5) = 7e-059
Identities = 64/86 (74%), Positives = 73/86 (84%)
Frame = +2 / +2
Query: 47 TAIVPTDAELLQAQADLWRHSLYYLTSMALKCAVELHIPTAIHNLGGSATLPDLVAALSL 226
T VPTDAELLQAQADLWRHSLYYL+SM L+CAV+L IPT IH LGG A L DL+AALSL
Sbjct: 47 TIEVPTDAELLQAQADLWRHSLYYLSSMGLRCAVQLQIPTTIHRLGGVALLADLMAALSL 226
Query: 227 PAAKLPFLGRVMRLLVTSGVFASSDD 304
P+ K+PFL R+MR+LVTSGVFA+ D
Sbjct: 227 PSVKMPFLHRLMRVLVTSGVFAADKD 304
Score = 116 bits (249), Expect(5) = 5e-035
Identities = 53/88 (60%), Positives = 61/88 (69%)
Frame = -1 / -2
Query: 310 LHVVGRREDARRDQQPHHAPEERELGRWQGQRGHEVRQRGRPA*VVDGGRDVELHRALER 131
L V R EDARRD+ H EER L RW+GQRGH+V ++G A VDGG D++L A E
Sbjct: 310 LGVFVRCEDARRDEHAHEPVEERHLHRWKGQRGHQVGEQGHAAEAVDGGGDLKLDGAAEP 131
Query: 130 HGCQVVEAVAPQVGLRLQQLGVRGNYGG 47
HG QVVEAVAPQV L LQQL VRG+ G
Sbjct: 130 HGGQVVEAVAPQVSLCLQQLSVRGHLNG 47
Score = 101 bits (215), Expect = 1e-020
Identities = 48/83 (57%), Positives = 55/83 (66%)
Frame = -2 / -3
Query: 291 AKTPDVTSSRITRPRNGSLAAGRDSAATRSGSVADPPRLWMAVGMWSSTAHLSAMDVR** 112
AKTPDVTS+R++R RNG GRD+AA RS S A PPR WM VG+ S TA S M+ R**
Sbjct: 291 AKTPDVTSTRMSRWRNGIFTDGRDNAAIRSASKATPPRRWMVVGI*SWTAQRSPMEDR** 112
Query: 111 RLWRHRXXXXXXXXXSVGTMAVA 43
RLWRHR SVGT V+
Sbjct: 111 RLWRHRSACACSSSASVGTSMVS 43
Score = 67.0 bits (140), Expect(5) = 7e-023
Identities = 29/52 (55%), Positives = 33/52 (63%)
Frame = +1 / +1
Query: 94 PVAPQPLLPDIHGAQVRGGAPHPDRHPQPRRVCHAAGPRGRAVPASGQAPVP 249
PVAPQPLLP +HGA +R A P HP PRR A P GR VP+ G+ VP
Sbjct: 94 PVAPQPLLPVLHGAPLRRPASDPHHHPPPRRRGLARRPDGRVVPSIGEDAVP 249
Score = 48.3 bits (99), Expect(5) = 7e-059
Identities = 17/33 (51%), Positives = 23/33 (69%)
Frame = +2 / +2
Query: 356 SEDHTYQKYFVLGTVSRHYVEAGMSLADWFKKE 454
+++H QKYFVL + H EA + LADWFKK+
Sbjct: 368 TDEHHSQKYFVLAVTAPHCAEAALGLADWFKKD 466
Score = 40.9 bits (83), Expect(5) = 7e-059
Identities = 16/45 (35%), Positives = 23/45 (51%)
Frame = +2 / +2
Query: 452 EEDEDRQLPSPFEALHGVPLVHESTKXXXXXXXXXXXXGVAAHDN 586
++D + +PSPFE +HG P+ E T G+A HDN
Sbjct: 458 KKDLEPPVPSPFEDMHGAPVFDERTPLMDEDLDAVANEGLAGHDN 592
Score = 35.0 bits (70), Expect(5) = 7e-059
Identities = 12/21 (57%), Positives = 18/21 (85%)
Frame = +2 / +3
Query: 680 SAAAIVKAFPDIKCTVLNLPR 742
+A A+VK +P I+CTVL+LP+
Sbjct: 681 TARALVKGYPHIRCTVLDLPK 743
Score = 32.2 bits (64), Expect(5) = 7e-023
Identities = 13/29 (44%), Positives = 19/29 (65%)
Frame = +2 / +2
Query: 311 YRLNPLSWLLVEGVESEDHTYQKYFVLGT 397
YRL PLS +LV+GV E H+ + + + T
Sbjct: 326 YRLTPLSRILVDGVTDEHHSQKYFVLAVT 412
Score = 30.9 bits (61), Expect(5) = 5e-035
Identities = 14/26 (53%), Positives = 14/26 (53%)
Frame = -2 / -3
Query: 450 FLNQSARDMPAST*WRETVPSTKYFW 373
FLNQSA AS STKYFW
Sbjct: 462 FLNQSASPSAASAQCGAVTASTKYFW 385
Score = 29.0 bits (57), Expect(5) = 7e-023
Identities = 11/15 (73%), Positives = 11/15 (73%)
Frame = +1 / +2
Query: 694 RQGLPRHQVHRAQPS 738
RQGL HQVHR PS
Sbjct: 695 RQGLSAHQVHRVGPS 739
Score = 26.7 bits (52), Expect(5) = 7e-059
Identities = 10/24 (41%), Positives = 13/24 (54%)
Frame = +2 / +3
Query: 623 DVFSGLRSLTYCCGRQGNASAAAI 694
D+ GL SLT CG G + A +
Sbjct: 627 DILKGLESLTDWCGGDGTTARALV 698
Score = 26.3 bits (51), Expect(5) = 7e-023
Identities = 11/17 (64%), Positives = 12/17 (70%)
Frame = +3 / +3
Query: 261 CGCWSRRASSRRPTTCS 311
C C SRRASS+R T S
Sbjct: 261 CACSSRRASSQRTKTPS 311
Score = 26.3 bits (51), Expect(5) = 5e-035
Identities = 12/39 (30%), Positives = 15/39 (38%)
Frame = -2 / -3
Query: 588 RLSCAATPXXXXXXXXXXXXXXXSWTRGTPCRASNGDGS 472
+LS A P S G PC +S GDG+
Sbjct: 594 KLSWPANPSLATASKSSSMRGVLSSKTGAPCMSSKGDGT 478
Score = 24.4 bits (47), Expect(5) = 7e-023
Identities = 11/31 (35%), Positives = 12/31 (38%)
Frame = +3 / +3
Query: 495 CTGCPSSTRAPSCWTRSWTGSWRKAWPRTTT 587
C S R WT+ WT K W TT
Sbjct: 501 CMAHLSLMREHPSWTKIWTPLPMKGWLAMTT 593
Score = 24.0 bits (46), Expect(5) = 5e-035
Identities = 10/16 (62%), Positives = 12/16 (75%)
Frame = -1 / -1
Query: 736 KVEHGALDVWEGLDDG 689
KV+HGA DV LD+G
Sbjct: 737 KVQHGAPDVRITLDEG 690
Score = 23.1 bits (44), Expect(5) = 5e-035
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = -1 / -2
Query: 379 LLVGVVLRLHALHQQPGQRVQPV 311
+L+ VVL +HQ GQR + V
Sbjct: 394 ILLAVVLIRDTVHQDAGQRGEAV 326
>gb|AV925298.1|AV925298 AV925298 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp.
vulgare cDNA clone basd22j14 5', mRNA sequence
Length = 595
Score = 196 bits (423), Expect(2) = 1e-058
Identities = 82/133 (61%), Positives = 104/133 (78%)
Frame = +2 / +3
Query: 56 VPTDAELLQAQADLWRHSLYYLTSMALKCAVELHIPTAIHNLGGSATLPDLVAALSLPAA 235
VPTDA+L+QAQADLWRHSL +LT+MAL+CAV+L IPTAIH LGG+ ++ DLV ALSLP +
Sbjct: 6 VPTDAQLIQAQADLWRHSLCHLTAMALRCAVQLGIPTAIHRLGGTTSVSDLVTALSLPQS 185
Query: 236 KLPFLGRVMRLLVTSGVFASSDDVQYRLNPLSWLLVEGVESEDHTYQKYFVLGTVSRHYV 415
K+P+LGRV+RLL TSG AS + Y L PLS+LLV+GV + QK +L T SR+ +
Sbjct: 186 KMPYLGRVLRLLATSGALASPKEGTYSLVPLSYLLVDGVFIDGEASQKALLLSTTSRYNI 365
Query: 416 EAGMSLADWFKKE 454
EA + LADWFKK+
Sbjct: 366 EAALGLADWFKKD 404
Score = 51.5 bits (106), Expect(2) = 1e-058
Identities = 21/47 (44%), Positives = 26/47 (55%)
Frame = +2 / +3
Query: 476 PSPFEALHGVPLVHESTKXXXXXXXXXXXXGVAAHDNLAIGTVIREC 616
PSPFE +HG L ES +AAHD+L IGT++REC
Sbjct: 417 PSPFEDVHGATLFEESMALLDPESDELFHEALAAHDHLGIGTILREC 557
>gb|BF260804.2|BF260804 HVSMEf0022P20f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEf0022P20f, mRNA sequence
Length = 729
Score = 152 bits (326), Expect(3) = 2e-058
Identities = 64/86 (74%), Positives = 73/86 (84%)
Frame = +2 / +2
Query: 47 TAIVPTDAELLQAQADLWRHSLYYLTSMALKCAVELHIPTAIHNLGGSATLPDLVAALSL 226
T VPTDAELLQAQADLWRHSLYYL+SM L+CAV+L IPT IH LGG A L DL+AALSL
Sbjct: 47 TIEVPTDAELLQAQADLWRHSLYYLSSMGLRCAVQLQIPTTIHRLGGVALLADLMAALSL 226
Query: 227 PAAKLPFLGRVMRLLVTSGVFASSDD 304
P+ K+PFL R+MR+LVTSGVFA+ D
Sbjct: 227 PSVKMPFLHRLMRVLVTSGVFAADKD 304
Score = 116 bits (249), Expect(5) = 9e-040
Identities = 53/88 (60%), Positives = 61/88 (69%)
Frame = -1 / -3
Query: 310 LHVVGRREDARRDQQPHHAPEERELGRWQGQRGHEVRQRGRPA*VVDGGRDVELHRALER 131
L V R EDARRD+ H EER L RW+GQRGH+V ++G A VDGG D++L A E
Sbjct: 310 LGVFVRCEDARRDEHAHEPVEERHLHRWKGQRGHQVGEQGHAAEAVDGGGDLKLDGAAEP 131
Query: 130 HGCQVVEAVAPQVGLRLQQLGVRGNYGG 47
HG QVVEAVAPQV L LQQL VRG+ G
Sbjct: 130 HGGQVVEAVAPQVSLCLQQLSVRGHLNG 47
Score = 101 bits (215), Expect = 1e-020
Identities = 48/83 (57%), Positives = 55/83 (66%)
Frame = -2 / -1
Query: 291 AKTPDVTSSRITRPRNGSLAAGRDSAATRSGSVADPPRLWMAVGMWSSTAHLSAMDVR** 112
AKTPDVTS+R++R RNG GRD+AA RS S A PPR WM VG+ S TA S M+ R**
Sbjct: 291 AKTPDVTSTRMSRWRNGIFTDGRDNAAIRSASKATPPRRWMVVGI*SWTAQRSPMEDR** 112
Query: 111 RLWRHRXXXXXXXXXSVGTMAVA 43
RLWRHR SVGT V+
Sbjct: 111 RLWRHRSACACSSSASVGTSMVS 43
Score = 65.2 bits (136), Expect(3) = 2e-058
Identities = 25/56 (44%), Positives = 34/56 (60%)
Frame = +2 / +2
Query: 452 EEDEDRQLPSPFEALHGVPLVHESTKXXXXXXXXXXXXGVAAHDNLAIGTVIRECG 619
++D + +PSPFE +HG P+ E T G+AAHDNL IGT++RECG
Sbjct: 458 KKDLEPPVPSPFEDMHGAPVFDERTPLMDEEFDAVANEGLAAHDNLGIGTILRECG 625
Score = 48.3 bits (99), Expect(3) = 2e-058
Identities = 17/33 (51%), Positives = 23/33 (69%)
Frame = +2 / +2
Query: 356 SEDHTYQKYFVLGTVSRHYVEAGMSLADWFKKE 454
+++H QKYFVL + H EA + LADWFKK+
Sbjct: 368 TDEHHSQKYFVLAVTAPHCAEAALGLADWFKKD 466
Score = 43.7 bits (89), Expect(5) = 9e-040
Identities = 19/50 (38%), Positives = 24/50 (48%)
Frame = -2 / -1
Query: 621 APHSRMTVPMARLSCAATPXXXXXXXXXXXXXXXSWTRGTPCRASNGDGS 472
+PHSR VP+ +LS AA P S G PC +S GDG+
Sbjct: 627 SPHSRNMVPIPKLSWAANPSLATASNSSSMRGVLSSKTGAPCMSSKGDGT 478
Score = 30.9 bits (61), Expect(5) = 9e-040
Identities = 14/26 (53%), Positives = 14/26 (53%)
Frame = -2 / -1
Query: 450 FLNQSARDMPAST*WRETVPSTKYFW 373
FLNQSA AS STKYFW
Sbjct: 462 FLNQSASPSAASAQCGAVTASTKYFW 385
Score = 23.1 bits (44), Expect(5) = 9e-040
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = -1 / -3
Query: 379 LLVGVVLRLHALHQQPGQRVQPV 311
+L+ VVL +HQ GQR + V
Sbjct: 394 ILLAVVLIRDTVHQDAGQRGEAV 326
Score = 23.1 bits (44), Expect(5) = 9e-040
Identities = 9/13 (69%), Positives = 10/13 (76%)
Frame = -1 / -2
Query: 727 HGALDVWEGLDDG 689
HGALDV LD+G
Sbjct: 728 HGALDVRISLDEG 690
>gb|AL504052.1|AL504052 AL504052 Hordeum vulgare Barke roots Hordeum vulgare subsp. vulgare
cDNA clone HW04A17V 5', mRNA sequence
Length = 661
Score = 157 bits (338), Expect(4) = 3e-058
Identities = 66/84 (78%), Positives = 75/84 (89%)
Frame = +2 / +2
Query: 44 ATAIVPTDAELLQAQADLWRHSLYYLTSMALKCAVELHIPTAIHNLGGSATLPDLVAALS 223
AT VPTDAELLQAQADLWRHSLYYLTSM L+CA++L IPTAIH LGG +LPDL+AALS
Sbjct: 14 ATMEVPTDAELLQAQADLWRHSLYYLTSMGLRCAIKLGIPTAIHRLGGXTSLPDLMAALS 193
Query: 224 LPAAKLPFLGRVMRLLVTSGVFAS 295
LPA+K PFL R+MR+LVTSGVFA+
Sbjct: 194 LPASKQPFLDRLMRVLVTSGVFAA 265
Score = 113 bits (242), Expect(3) = 4e-034
Identities = 54/83 (65%), Positives = 56/83 (67%)
Frame = -2 / -2
Query: 291 AKTPDVTSSRITRPRNGSLAAGRDSAATRSGSVADPPRLWMAVGMWSSTAHLSAMDVR** 112
AKTPDVTS+RI R RNG L AG DSAA +SGS PPR WMAVGM S A S MDVR**
Sbjct: 261 AKTPDVTSTRIRRSRNGCLLAGSDSAAIKSGSEVXPPRRWMAVGMPSLMAQRSPMDVR** 82
Query: 111 RLWRHRXXXXXXXXXSVGTMAVA 43
RLWRHR SVGT VA
Sbjct: 81 RLWRHRSACACSSSASVGTSMVA 13
Score = 108 bits (231), Expect(2) = 9e-024
Identities = 51/81 (62%), Positives = 57/81 (70%)
Frame = -1 / -1
Query: 289 EDARRDQQPHHAPEERELGRWQGQRGHEVRQRGRPA*VVDGGRDVELHRALERHGCQVVE 110
+D RRDQ H A EE L R + QRGH+VRQRG PA VDG RD EL A E HG +VVE
Sbjct: 259 KDTRRDQHTH*AVEEWLLARRKRQRGHQVRQRGXPAEAVDGRRDAELDGAAEPHGREVVE 80
Query: 109 AVAPQVGLRLQQLGVRGNYGG 47
AVAPQV L LQQLG+RG+ G
Sbjct: 79 AVAPQVRLCLQQLGIRGDLHG 17
Score = 77.1 bits (162), Expect(4) = 5e-022
Identities = 33/53 (62%), Positives = 37/53 (69%)
Frame = +1 / +1
Query: 94 PVAPQPLLPDIHGAQVRGGAPHPDRHPQPRRVCHAAGPRGRAVPASGQAPVPR 252
PVAPQPLLP +HGA +R A HPD HP PRR AAG GRAV + QA +PR
Sbjct: 64 PVAPQPLLPHVHGAPLRHQARHPDGHPPPRRGHLAAGLDGRAVASGEQAAIPR 222
Score = 55.1 bits (114), Expect(4) = 3e-058
Identities = 22/48 (45%), Positives = 27/48 (56%)
Frame = +2 / +2
Query: 473 LPSPFEALHGVPLVHESTKXXXXXXXXXXXXGVAAHDNLAIGTVIREC 616
+PSPFE +HG L EST G+ HDNL IGT++REC
Sbjct: 470 VPSPFEDVHGASLFDESTALLDKELDELVTEGLPXHDNLGIGTIMREC 613
Score = 43.7 bits (89), Expect(3) = 4e-034
Identities = 19/48 (39%), Positives = 22/48 (45%)
Frame = -2 / -2
Query: 615 HSRMTVPMARLSCAATPXXXXXXXXXXXXXXXSWTRGTPCRASNGDGS 472
HSRM VPM RLS +P S PC +SNGDG+
Sbjct: 612 HSRMIVPMPRLSWXGSPSVTSSSSSLSRSAVLSSKSDAPCTSSNGDGT 469
Score = 41.4 bits (84), Expect(4) = 3e-058
Identities = 16/35 (45%), Positives = 21/35 (60%)
Frame = +2 / +2
Query: 350 VESEDHTYQKYFVLGTVSRHYVEAGMSLADWFKKE 454
V ++H Q FVL S Y EA + LADWF+K+
Sbjct: 350 VGHDEHHSQTSFVLAATSPFYTEAALGLADWFRKD 454
Score = 31.8 bits (63), Expect(4) = 5e-022
Identities = 15/26 (57%), Positives = 17/26 (65%)
Frame = +1 / +1
Query: 373 PEVLRAGHRLPPLRGGRHVPGRLVQE 450
P+VLRA + L GGR GRLVQE
Sbjct: 373 PDVLRARRDVALLHGGRAGAGRLVQE 450
Score = 29.0 bits (57), Expect(4) = 3e-058
Identities = 10/14 (71%), Positives = 11/14 (78%)
Frame = +2 / +2
Query: 623 DVFSGLRSLTYCCG 664
D+F GL SLT CCG
Sbjct: 617 DLFKGLESLTDCCG 658
Score = 26.3 bits (51), Expect(3) = 4e-034
Identities = 13/26 (50%), Positives = 14/26 (53%)
Frame = -2 / -2
Query: 450 FLNQSARDMPAST*WRETVPSTKYFW 373
FLNQSA AS * + STK W
Sbjct: 450 FLNQSASPSAASV*KGDVAASTKDVW 373
Score = 25.8 bits (50), Expect(4) = 5e-022
Identities = 10/17 (58%), Positives = 11/17 (64%)
Frame = +3 / +3
Query: 255 A*CGCWSRRASSRRPTT 305
A*C CWSRR S + T
Sbjct: 225 A*CVCWSRRVSLQPAAT 275
Score = 24.9 bits (48), Expect(4) = 5e-022
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = +3 / +3
Query: 495 CTGCPSSTRAPSCWTRSWT 551
C SSTRA WTRS T
Sbjct: 492 CMARRSSTRARRSWTRSST 548
Score = 22.1 bits (42), Expect(2) = 9e-024
Identities = 11/28 (39%), Positives = 14/28 (50%)
Frame = -1 / -1
Query: 442 PVGQGHAGLHVVAGDGAQHEVLLVGVVL 359
PVGQ GL V +HE L V++
Sbjct: 442 PVGQPQRGLRVEGRRRGEHEGRLAVVLV 359
>gb|BG309181.2|BG309181 HVSMEc0004K06f Hordeum vulgare seedling shoot EST library
HVcDNA0003 (Etiolated and unstressed) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEc0004K06f, mRNA sequence
Length = 826
Score = 198 bits (427), Expect(5) = 3e-058
Identities = 83/136 (61%), Positives = 104/136 (76%)
Frame = +2 / +1
Query: 47 TAIVPTDAELLQAQADLWRHSLYYLTSMALKCAVELHIPTAIHNLGGSATLPDLVAALSL 226
T VPTDA+L+QAQADLWRHSL +L ++AL+CAV+L IPTAIH LGG+ ++ DLV ALSL
Sbjct: 16 TMAVPTDAQLIQAQADLWRHSLCHLRAIALRCAVQLGIPTAIHRLGGTTSVSDLVTALSL 195
Query: 227 PAAKLPFLGRVMRLLVTSGVFASSDDVQYRLNPLSWLLVEGVESEDHTYQKYFVLGTVSR 406
P +K+P+LGRV+RLL SG AS + Y L PLS+LLV+GV + QK VL T SR
Sbjct: 196 PQSKMPYLGRVLRLLAASGALASPKEGTYSLVPLSYLLVDGVFIDGEASQKAIVLTTTSR 375
Query: 407 HYVEAGMSLADWFKKE 454
HY+EA + LADWFKK+
Sbjct: 376 HYIEAALGLADWFKKD 423
Score = 27.2 bits (53), Expect(5) = 3e-058
Identities = 9/16 (56%), Positives = 13/16 (81%)
Frame = +2 / +2
Query: 569 VAAHDNLAIGTVIREC 616
+AAHD+L GT++R C
Sbjct: 530 LAAHDHLGKGTILRGC 577
Score = 25.4 bits (49), Expect(5) = 3e-058
Identities = 10/15 (66%), Positives = 11/15 (73%)
Frame = +2 / +3
Query: 698 KAFPDIKCTVLNLPR 742
KAFP IKC VL+ R
Sbjct: 654 KAFPHIKCNVLDPSR 698
Score = 25.4 bits (49), Expect(5) = 3e-058
Identities = 9/15 (60%), Positives = 10/15 (66%)
Frame = +2 / +1
Query: 476 PSPFEALHGVPLVHE 520
PSPFE +HG L E
Sbjct: 436 PSPFEDVHGATLFEE 480
Score = 24.4 bits (47), Expect(5) = 3e-058
Identities = 9/14 (64%), Positives = 10/14 (71%)
Frame = +2 / +2
Query: 788 QAVMLKLVLHFWSD 829
Q +MLKL L FW D
Sbjct: 776 QVLMLKLGLDFWED 817
>gb|BF260521.2|BF260521 HVSMEf0022D17f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEf0022D17f, mRNA sequence
Length = 805
Score = 182 bits (392), Expect(3) = 5e-058
Identities = 79/136 (58%), Positives = 100/136 (73%)
Frame = +2 / +2
Query: 47 TAIVPTDAELLQAQADLWRHSLYYLTSMALKCAVELHIPTAIHNLGGSATLPDLVAALSL 226
T VPTDA+L++AQADL RHSL YLTSMAL+CA+EL IPTAI LGG+A+LPDL+AALSL
Sbjct: 26 TMTVPTDAQLIKAQADLQRHSLTYLTSMALRCAIELGIPTAIQRLGGTASLPDLMAALSL 205
Query: 227 PAAKLPFLGRVMRLLVTSGVFASSDDVQYRLNPLSWLLVEGVESEDHTYQKYFVLGTVSR 406
P K PFL RV+RLL S A ++ Y L PLS++LV+GV + Q F L SR
Sbjct: 206 PPPKAPFLSRVLRLLAKSDALACTEAGIYSLTPLSYILVDGVLIDGEARQVTFPLAVTSR 385
Query: 407 HYVEAGMSLADWFKKE 454
+++E+G+ LADWFK +
Sbjct: 386 YHMESGLGLADWFKND 433
Score = 103 bits (219), Expect(3) = 2e-025
Identities = 51/86 (59%), Positives = 57/86 (66%)
Frame = -2 / -2
Query: 303 SSDDAKTPDVTSSRITRPRNGSLAAGRDSAATRSGSVADPPRLWMAVGMWSSTAHLSAMD 124
+S A+ D+ SSR TR RNG+L G DSAA RSG A PPR W+AVGM SS AHLSAMD
Sbjct: 282 ASVHARASDLASSRRTRLRNGALGGGSDSAAIRSGKDAVPPRRWIAVGMPSSMAHLSAMD 103
Query: 123 VR**RLWRHRXXXXXXXXXSVGTMAV 46
VR* RLWR R SVGT+ V
Sbjct: 102 VR*VRLWRCRSACALISWASVGTVIV 25
Score = 99.6 bits (211), Expect(2) = 5e-021
Identities = 55/129 (42%), Positives = 71/129 (55%)
Frame = -1 / -1
Query: 442 PVGQGHAGLHVVAGDGAQHEVLLVGVVLRLHALHQQPGQRVQPVLHVVGRREDARRDQQP 263
P+GQ LHV+ Q + L + + +A+H+ GQR Q V +G R+ QQP
Sbjct: 421 PIGQA*T*LHVIPRGHGQRKGHLPSLAVDEYAIHEDVGQRGQAVDPGLGARQGVGFGQQP 242
Query: 262 HHAPEERELGRWQGQRGHEVRQRGRPA*VVDGGRDVELHRALERHGCQVVEAVAPQVGLR 83
A E+R G + QRGH+V Q A +D RD EL A E HG +V EAVA QV LR
Sbjct: 241 QDAAEKRRFGWRKRQRGHQVGQGRGAAEALDRRRDAELDGAPECHGREVGEAVALQVSLR 62
Query: 82 LQQLGVRGN 56
L QLGV G+
Sbjct: 61 LDQLGVGGD 35
Score = 64.8 bits (135), Expect(5) = 1e-023
Identities = 29/55 (52%), Positives = 34/55 (61%)
Frame = +1 / +1
Query: 94 PVAPQPLLPDIHGAQVRGGAPHPDRHPQPRRVCHAAGPRGRAVPASGQAPVPRAR 258
P APQP LP +HG QVR A HPD P PRR A P GRAV ++ Q+ V + R
Sbjct: 73 PAAPQPHLPHVHGTQVRHRARHPDGDPAPRRHRVLARPDGRAVASATQSAVSQPR 237
Score = 45.1 bits (92), Expect(3) = 5e-058
Identities = 19/48 (39%), Positives = 25/48 (52%)
Frame = +2 / +2
Query: 473 LPSPFEALHGVPLVHESTKXXXXXXXXXXXXGVAAHDNLAIGTVIREC 616
+PSPFE +H ES +AAHD++ IGTV+REC
Sbjct: 446 VPSPFEHVHAAAPFDESMTLLDPETDKLFYEALAAHDHMGIGTVLREC 589
Score = 36.8 bits (74), Expect(3) = 5e-058
Identities = 15/28 (53%), Positives = 18/28 (64%)
Frame = +2 / +2
Query: 659 CGRQGNASAAAIVKAFPDIKCTVLNLPR 742
C +A AIVKAFP IKC V +LP+
Sbjct: 626 CCGGDGTTARAIVKAFPHIKCNVFDLPK 709
Score = 32.2 bits (64), Expect(5) = 1e-023
Identities = 12/24 (50%), Positives = 12/24 (50%)
Frame = +3 / +3
Query: 261 CGCWSRRASSRRPTTCSTG*TRCP 332
CGCW R P ST * RCP
Sbjct: 240 CGCWPNPTPWRAPRPGSTA*PRCP 311
Score = 31.3 bits (62), Expect(5) = 1e-023
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = +2 / +2
Query: 626 VFSGLRSLTYCCGRQGNASAAAI 694
+F GL+SLT CCG G + A +
Sbjct: 596 LFDGLQSLTDCCGGDGTTARAIV 664
Score = 30.4 bits (60), Expect(3) = 2e-025
Identities = 16/33 (48%), Positives = 18/33 (54%)
Frame = -2 / -2
Query: 480 DGSWRXXXXSFLNQSARDMPAST*WRETVPSTK 382
+G SFLNQSAR P S *+RE S K
Sbjct: 459 NGDGTGSKLSFLNQSARPRPDSM*YREVTASGK 361
Score = 27.6 bits (54), Expect(5) = 1e-023
Identities = 13/32 (40%), Positives = 14/32 (43%)
Frame = +3 / +3
Query: 495 CTGCPSSTRAPSCWTRSWTGSWRKAWPRTTTW 590
CT STRA C T T + WP T W
Sbjct: 468 CTRRRPSTRA*RCSTLRPTSCSTRPWPPMTIW 563
Score = 26.3 bits (51), Expect(3) = 2e-025
Identities = 10/16 (62%), Positives = 13/16 (81%)
Frame = -1 / -1
Query: 736 KVEHGALDVWEGLDDG 689
+V+H ALD+ EG DDG
Sbjct: 703 EVKHIALDMREGFDDG 656
Score = 25.8 bits (50), Expect(5) = 1e-023
Identities = 13/23 (56%), Positives = 13/23 (56%)
Frame = +1 / +1
Query: 382 LRAGHRLPPLRGGRHVPGRLVQE 450
L AG L G R PGRLVQE
Sbjct: 361 LSAGRDLAVSHGVRSRPGRLVQE 429
Score = 25.4 bits (49), Expect(2) = 5e-021
Identities = 10/14 (71%), Positives = 12/14 (85%)
Frame = -2 / -2
Query: 720 HLMSGKALTMAAAL 679
HL+ GKALTMA A+
Sbjct: 687 HLICGKALTMALAV 646
>gb|BJ465101.1|BJ465101 BJ465101 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags37m04 5', mRNA sequence
Length = 590
Score = 160 bits (345), Expect(3) = 5e-058
Identities = 68/95 (71%), Positives = 79/95 (83%)
Frame = +2 / +2
Query: 29 LTTIMATAIVPTDAELLQAQADLWRHSLYYLTSMALKCAVELHIPTAIHNLGGSATLPDL 208
+ T T VP DAELLQAQADLWRHSLYYL+SMAL+CAVEL IPTAIH LGG A+LPDL
Sbjct: 47 MATQAETIEVPADAELLQAQADLWRHSLYYLSSMALRCAVELEIPTAIHRLGGVASLPDL 226
Query: 209 VAALSLPAAKLPFLGRVMRLLVTSGVFASSDDVQY 313
+AALSLP+ K+ FLGRVMR+LV SGVFA+ + +Y
Sbjct: 227 MAALSLPSVKMSFLGRVMRVLVNSGVFAADNSSEY 331
Score = 117 bits (250), Expect(2) = 1e-030
Identities = 56/92 (60%), Positives = 62/92 (67%)
Frame = -1 / -2
Query: 322 VQPVLHVVGRREDARRDQQPHHAPEERELGRWQGQRGHEVRQRGRPA*VVDGGRDVELHR 143
+ PVL V ED R D+ H EER L R +GQRGH+V QRG PA* VD RD+EL
Sbjct: 340 LHPVLGAVIGCEDTRVDEHAHDPAEERHLNRGKGQRGHQVGQRGDPA*AVDRSRDLELDG 161
Query: 142 ALERHGCQVVEAVAPQVGLRLQQLGVRGNYGG 47
A ERHG +VVEAVAPQV L LQQL VRGN G
Sbjct: 160 APERHGGEVVEAVAPQVCLCLQQLSVRGNLNG 65
Score = 114 bits (243), Expect(2) = 4e-029
Identities = 53/90 (58%), Positives = 62/90 (68%)
Frame = -2 / -3
Query: 291 AKTPDVTSSRITRPRNGSLAAGRDSAATRSGSVADPPRLWMAVGMWSSTAHLSAMDVR** 112
AKTP++TS+R+TRPR L GRDSAA RSGS A PPR W+AVG+ SSTAH SAM+ R**
Sbjct: 309 AKTPELTSTRMTRPRKDILTEGRDSAAIRSGSEATPPRRWIAVGISSSTAHRSAMEER** 130
Query: 111 RLWRHRXXXXXXXXXSVGTMAVAIIVVKSL 22
RLWRHR S GT V+ V +L
Sbjct: 129 RLWRHRSACACSSSASAGTSMVSA*VAIAL 40
Score = 77.1 bits (162), Expect(3) = 5e-058
Identities = 30/50 (60%), Positives = 37/50 (74%)
Frame = +2 / +2
Query: 311 YRLNPLSWLLVEGVESEDHTYQKYFVLGTVSRHYVEAGMSLADWFKKEED 460
YRL PLS +LV GV +++H QKYFVLG S HY EA + LADWFKK+ +
Sbjct: 344 YRLTPLSRVLVHGVLADEHHSQKYFVLGVTSPHYTEAALGLADWFKKDTE 493
Score = 36.8 bits (74), Expect(2) = 1e-030
Identities = 16/26 (61%), Positives = 16/26 (61%)
Frame = -2 / -3
Query: 450 FLNQSARDMPAST*WRETVPSTKYFW 373
FLNQSA AS * E P TKYFW
Sbjct: 483 FLNQSASPNAASV*CGEVTPRTKYFW 406
Score = 34.5 bits (69), Expect(2) = 4e-029
Identities = 16/39 (41%), Positives = 23/39 (58%)
Frame = -1 / -2
Query: 442 PVGQGHAGLHVVAGDGAQHEVLLVGVVLRLHALHQQPGQ 326
PVGQ L VV ++++LL V++R A+HQ GQ
Sbjct: 475 PVGQPQRRLRVVRRGDTKNKILLAMVLVR*DAVHQNAGQ 359
Score = 26.3 bits (51), Expect(3) = 5e-058
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = +2 / +2
Query: 452 EEDEDRQLPSPFEALHGVPLVHEST 526
++D + + SPFE GVPL E T
Sbjct: 479 KKDTELPVLSPFEEKFGVPLFDEKT 553
>gb|AV916428.1|AV916428 AV916428 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags17c24 5', mRNA sequence
Length = 581
Score = 160 bits (345), Expect(3) = 5e-058
Identities = 68/95 (71%), Positives = 79/95 (83%)
Frame = +2 / +1
Query: 29 LTTIMATAIVPTDAELLQAQADLWRHSLYYLTSMALKCAVELHIPTAIHNLGGSATLPDL 208
+ T T VP DAELLQAQADLWRHSLYYL+SMAL+CAVEL IPTAIH LGG A+LPDL
Sbjct: 46 MATQAETIEVPADAELLQAQADLWRHSLYYLSSMALRCAVELEIPTAIHRLGGVASLPDL 225
Query: 209 VAALSLPAAKLPFLGRVMRLLVTSGVFASSDDVQY 313
+AALSLP+ K+ FLGRVMR+LV SGVFA+ + +Y
Sbjct: 226 MAALSLPSVKMSFLGRVMRVLVNSGVFAADNSSEY 330
Score = 117 bits (250), Expect(2) = 1e-030
Identities = 56/92 (60%), Positives = 62/92 (67%)
Frame = -1 / -3
Query: 322 VQPVLHVVGRREDARRDQQPHHAPEERELGRWQGQRGHEVRQRGRPA*VVDGGRDVELHR 143
+ PVL V ED R D+ H EER L R +GQRGH+V QRG PA* VD RD+EL
Sbjct: 339 LHPVLGAVIGCEDTRVDEHAHDPAEERHLNRGKGQRGHQVGQRGDPA*AVDRSRDLELDG 160
Query: 142 ALERHGCQVVEAVAPQVGLRLQQLGVRGNYGG 47
A ERHG +VVEAVAPQV L LQQL VRGN G
Sbjct: 159 APERHGGEVVEAVAPQVCLCLQQLSVRGNLNG 64
Score = 114 bits (243), Expect(2) = 4e-029
Identities = 53/90 (58%), Positives = 62/90 (68%)
Frame = -2 / -1
Query: 291 AKTPDVTSSRITRPRNGSLAAGRDSAATRSGSVADPPRLWMAVGMWSSTAHLSAMDVR** 112
AKTP++TS+R+TRPR L GRDSAA RSGS A PPR W+AVG+ SSTAH SAM+ R**
Sbjct: 308 AKTPELTSTRMTRPRKDILTEGRDSAAIRSGSEATPPRRWIAVGISSSTAHRSAMEER** 129
Query: 111 RLWRHRXXXXXXXXXSVGTMAVAIIVVKSL 22
RLWRHR S GT V+ V +L
Sbjct: 128 RLWRHRSACACSSSASAGTSMVSA*VAIAL 39
Score = 77.1 bits (162), Expect(3) = 5e-058
Identities = 30/50 (60%), Positives = 37/50 (74%)
Frame = +2 / +1
Query: 311 YRLNPLSWLLVEGVESEDHTYQKYFVLGTVSRHYVEAGMSLADWFKKEED 460
YRL PLS +LV GV +++H QKYFVLG S HY EA + LADWFKK+ +
Sbjct: 343 YRLTPLSRVLVHGVLADEHHSQKYFVLGVTSPHYTEAALGLADWFKKDTE 492
Score = 36.8 bits (74), Expect(2) = 1e-030
Identities = 16/26 (61%), Positives = 16/26 (61%)
Frame = -2 / -1
Query: 450 FLNQSARDMPAST*WRETVPSTKYFW 373
FLNQSA AS * E P TKYFW
Sbjct: 482 FLNQSASPNAASV*CGEVTPRTKYFW 405
Score = 34.5 bits (69), Expect(2) = 4e-029
Identities = 16/39 (41%), Positives = 23/39 (58%)
Frame = -1 / -3
Query: 442 PVGQGHAGLHVVAGDGAQHEVLLVGVVLRLHALHQQPGQ 326
PVGQ L VV ++++LL V++R A+HQ GQ
Sbjct: 474 PVGQPQRRLRVVRRGDTKNKILLAMVLVR*DAVHQNAGQ 358
Score = 26.3 bits (51), Expect(3) = 5e-058
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = +2 / +1
Query: 452 EEDEDRQLPSPFEALHGVPLVHEST 526
++D + + SPFE GVPL E T
Sbjct: 478 KKDTELPVLSPFEEKFGVPLFDEKT 552
>gb|BJ465100.1|BJ465100 BJ465100 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags37m03 5', mRNA sequence
Length = 577
Score = 160 bits (345), Expect(3) = 5e-058
Identities = 68/95 (71%), Positives = 79/95 (83%)
Frame = +2 / +1
Query: 29 LTTIMATAIVPTDAELLQAQADLWRHSLYYLTSMALKCAVELHIPTAIHNLGGSATLPDL 208
+ T T VP DAELLQAQADLWRHSLYYL+SMAL+CAVEL IPTAIH LGG A+LPDL
Sbjct: 46 MATQAETIEVPADAELLQAQADLWRHSLYYLSSMALRCAVELEIPTAIHRLGGVASLPDL 225
Query: 209 VAALSLPAAKLPFLGRVMRLLVTSGVFASSDDVQY 313
+AALSLP+ K+ FLGRVMR+LV SGVFA+ + +Y
Sbjct: 226 MAALSLPSVKMSFLGRVMRVLVNSGVFAADNSSEY 330
Score = 117 bits (250), Expect(2) = 1e-030
Identities = 56/92 (60%), Positives = 62/92 (67%)
Frame = -1 / -2
Query: 322 VQPVLHVVGRREDARRDQQPHHAPEERELGRWQGQRGHEVRQRGRPA*VVDGGRDVELHR 143
+ PVL V ED R D+ H EER L R +GQRGH+V QRG PA* VD RD+EL
Sbjct: 339 LHPVLGAVIGCEDTRVDEHAHDPAEERHLNRGKGQRGHQVGQRGDPA*AVDRSRDLELDG 160
Query: 142 ALERHGCQVVEAVAPQVGLRLQQLGVRGNYGG 47
A ERHG +VVEAVAPQV L LQQL VRGN G
Sbjct: 159 APERHGGEVVEAVAPQVCLCLQQLSVRGNLNG 64
Score = 114 bits (243), Expect(2) = 4e-029
Identities = 53/90 (58%), Positives = 62/90 (68%)
Frame = -2 / -3
Query: 291 AKTPDVTSSRITRPRNGSLAAGRDSAATRSGSVADPPRLWMAVGMWSSTAHLSAMDVR** 112
AKTP++TS+R+TRPR L GRDSAA RSGS A PPR W+AVG+ SSTAH SAM+ R**
Sbjct: 308 AKTPELTSTRMTRPRKDILTEGRDSAAIRSGSEATPPRRWIAVGISSSTAHRSAMEER** 129
Query: 111 RLWRHRXXXXXXXXXSVGTMAVAIIVVKSL 22
RLWRHR S GT V+ V +L
Sbjct: 128 RLWRHRSACACSSSASAGTSMVSA*VAIAL 39
Score = 77.1 bits (162), Expect(3) = 5e-058
Identities = 30/50 (60%), Positives = 37/50 (74%)
Frame = +2 / +1
Query: 311 YRLNPLSWLLVEGVESEDHTYQKYFVLGTVSRHYVEAGMSLADWFKKEED 460
YRL PLS +LV GV +++H QKYFVLG S HY EA + LADWFKK+ +
Sbjct: 343 YRLTPLSRVLVHGVLADEHHSQKYFVLGVTSPHYTEAALGLADWFKKDTE 492
Score = 36.8 bits (74), Expect(2) = 1e-030
Identities = 16/26 (61%), Positives = 16/26 (61%)
Frame = -2 / -3
Query: 450 FLNQSARDMPAST*WRETVPSTKYFW 373
FLNQSA AS * E P TKYFW
Sbjct: 482 FLNQSASPNAASV*CGEVTPRTKYFW 405
Score = 34.5 bits (69), Expect(2) = 4e-029
Identities = 16/39 (41%), Positives = 23/39 (58%)
Frame = -1 / -2
Query: 442 PVGQGHAGLHVVAGDGAQHEVLLVGVVLRLHALHQQPGQ 326
PVGQ L VV ++++LL V++R A+HQ GQ
Sbjct: 474 PVGQPQRRLRVVRRGDTKNKILLAMVLVR*DAVHQNAGQ 358
Score = 26.3 bits (51), Expect(3) = 5e-058
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = +2 / +1
Query: 452 EEDEDRQLPSPFEALHGVPLVHEST 526
++D + + SPFE GVPL E T
Sbjct: 478 KKDTELPVLSPFEEKFGVPLFDEKT 552
>gb|BF259028.2|BF259028 HVSMEf0017H05f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEf0017H05f, mRNA sequence
Length = 791
Score = 182 bits (392), Expect(3) = 7e-058
Identities = 79/136 (58%), Positives = 100/136 (73%)
Frame = +2 / +2
Query: 47 TAIVPTDAELLQAQADLWRHSLYYLTSMALKCAVELHIPTAIHNLGGSATLPDLVAALSL 226
T VPTDA+L++AQADL RHSL YLTSMAL+CA+EL IPTAI LGG+A+LPDL+AALSL
Sbjct: 47 TMTVPTDAQLIKAQADLQRHSLTYLTSMALRCAIELGIPTAIQRLGGTASLPDLMAALSL 226
Query: 227 PAAKLPFLGRVMRLLVTSGVFASSDDVQYRLNPLSWLLVEGVESEDHTYQKYFVLGTVSR 406
P K PFL RV+RLL S A ++ Y L PLS++LV+GV + Q F L SR
Sbjct: 227 PPPKAPFLSRVLRLLAKSDALACTEAGIYSLTPLSYILVDGVLIDGEARQVTFPLAVTSR 406
Query: 407 HYVEAGMSLADWFKKE 454
+++E+G+ LADWFK +
Sbjct: 407 YHMESGLGLADWFKND 454
Score = 103 bits (219), Expect(3) = 6e-026
Identities = 51/86 (59%), Positives = 57/86 (66%)
Frame = -2 / -3
Query: 303 SSDDAKTPDVTSSRITRPRNGSLAAGRDSAATRSGSVADPPRLWMAVGMWSSTAHLSAMD 124
+S A+ D+ SSR TR RNG+L G DSAA RSG A PPR W+AVGM SS AHLSAMD
Sbjct: 303 ASVHARASDLASSRRTRLRNGALGGGSDSAAIRSGKDAVPPRRWIAVGMPSSMAHLSAMD 124
Query: 123 VR**RLWRHRXXXXXXXXXSVGTMAV 46
VR* RLWR R SVGT+ V
Sbjct: 123 VR*VRLWRCRSACALISWASVGTVIV 46
Score = 64.8 bits (135), Expect(6) = 2e-025
Identities = 29/55 (52%), Positives = 34/55 (61%)
Frame = +1 / +1
Query: 94 PVAPQPLLPDIHGAQVRGGAPHPDRHPQPRRVCHAAGPRGRAVPASGQAPVPRAR 258
P APQP LP +HG QVR A HPD P PRR A P GRAV ++ Q+ V + R
Sbjct: 94 PAAPQPHLPHVHGTQVRHRARHPDGDPAPRRHRVLARPDGRAVASATQSAVSQPR 258
Score = 45.1 bits (92), Expect(3) = 7e-058
Identities = 19/48 (39%), Positives = 25/48 (52%)
Frame = +2 / +2
Query: 473 LPSPFEALHGVPLVHESTKXXXXXXXXXXXXGVAAHDNLAIGTVIREC 616
+PSPFE +H ES +AAHD++ IGTV+REC
Sbjct: 467 VPSPFEHVHAAAPFDESMTLLDPETDKLVYEALAAHDHMGIGTVLREC 610
Score = 36.3 bits (73), Expect(3) = 7e-058
Identities = 15/28 (53%), Positives = 17/28 (60%)
Frame = +2 / +2
Query: 659 CGRQGNASAAAIVKAFPDIKCTVLNLPR 742
C + AIVKAFP IKC VL LP+
Sbjct: 647 CCGGDGTTGKAIVKAFPHIKCNVLGLPK 730
Score = 32.2 bits (64), Expect(6) = 2e-025
Identities = 12/24 (50%), Positives = 12/24 (50%)
Frame = +3 / +3
Query: 261 CGCWSRRASSRRPTTCSTG*TRCP 332
CGCW R P ST * RCP
Sbjct: 261 CGCWPNPTPWRAPRPGSTA*PRCP 332
Score = 30.9 bits (61), Expect(6) = 2e-025
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = +2 / +2
Query: 626 VFSGLRSLTYCCGRQGNASAAAI 694
+F GL+SLT CCG G A +
Sbjct: 617 LFDGLQSLTDCCGGDGTTGKAIV 685
Score = 30.4 bits (60), Expect(3) = 6e-026
Identities = 16/33 (48%), Positives = 18/33 (54%)
Frame = -2 / -3
Query: 480 DGSWRXXXXSFLNQSARDMPAST*WRETVPSTK 382
+G SFLNQSAR P S *+RE S K
Sbjct: 480 NGDGTGSKLSFLNQSARPRPDSM*YREVTASGK 382
Score = 27.6 bits (54), Expect(3) = 6e-026
Identities = 11/16 (68%), Positives = 13/16 (81%)
Frame = -1 / -2
Query: 736 KVEHGALDVWEGLDDG 689
K +H ALD+ EGLDDG
Sbjct: 724 KSQHIALDMREGLDDG 677
Score = 26.7 bits (52), Expect(6) = 2e-025
Identities = 13/32 (40%), Positives = 14/32 (43%)
Frame = +3 / +3
Query: 495 CTGCPSSTRAPSCWTRSWTGSWRKAWPRTTTW 590
CT STRA C T T + WP T W
Sbjct: 489 CTRRRPSTRA*RCSTLRPTSWSTRPWPPMTIW 584
Score = 25.8 bits (50), Expect(6) = 2e-025
Identities = 13/23 (56%), Positives = 13/23 (56%)
Frame = +1 / +1
Query: 382 LRAGHRLPPLRGGRHVPGRLVQE 450
L AG L G R PGRLVQE
Sbjct: 382 LSAGRDLAVSHGVRSRPGRLVQE 450
Score = 24.0 bits (46), Expect(6) = 2e-025
Identities = 9/13 (69%), Positives = 10/13 (76%)
Frame = +1 / +1
Query: 682 RGRHRQGLPRHQV 720
R HRQGLP +QV
Sbjct: 670 RQGHRQGLPAYQV 708
>gb|BF631324.2|BF631324 HVSMEb0015J20f Hordeum vulgare seedling shoot EST library
HVcDNA0002 (Dehydration stress) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEb0015J20f, mRNA sequence
Length = 832
Score = 182 bits (392), Expect(3) = 1e-057
Identities = 79/136 (58%), Positives = 100/136 (73%)
Frame = +2 / +2
Query: 47 TAIVPTDAELLQAQADLWRHSLYYLTSMALKCAVELHIPTAIHNLGGSATLPDLVAALSL 226
T VPTDA+L++AQADL RHSL YLTSMAL+CA+EL IPTAI LGG+A+LPDL+AALSL
Sbjct: 29 TMTVPTDAQLIKAQADLQRHSLTYLTSMALRCAIELGIPTAIQRLGGTASLPDLMAALSL 208
Query: 227 PAAKLPFLGRVMRLLVTSGVFASSDDVQYRLNPLSWLLVEGVESEDHTYQKYFVLGTVSR 406
P K PFL RV+RLL S A ++ Y L PLS++LV+GV + Q F L SR
Sbjct: 209 PPPKAPFLSRVLRLLAKSDALACTEAGIYSLTPLSYILVDGVLIDGEARQVTFPLAVTSR 388
Query: 407 HYVEAGMSLADWFKKE 454
+++E+G+ LADWFK +
Sbjct: 389 YHMESGLGLADWFKND 436
Score = 103 bits (219), Expect(2) = 1e-024
Identities = 51/86 (59%), Positives = 57/86 (66%)
Frame = -2 / -2
Query: 303 SSDDAKTPDVTSSRITRPRNGSLAAGRDSAATRSGSVADPPRLWMAVGMWSSTAHLSAMD 124
+S A+ D+ SSR TR RNG+L G DSAA RSG A PPR W+AVGM SS AHLSAMD
Sbjct: 285 ASVHARASDLASSRRTRLRNGALGGGSDSAAIRSGKDAVPPRRWIAVGMPSSMAHLSAMD 106
Query: 123 VR**RLWRHRXXXXXXXXXSVGTMAV 46
VR* RLWR R SVGT+ V
Sbjct: 105 VR*VRLWRCRSACALISWASVGTVIV 28
Score = 64.8 bits (135), Expect(5) = 2e-022
Identities = 29/55 (52%), Positives = 34/55 (61%)
Frame = +1 / +1
Query: 94 PVAPQPLLPDIHGAQVRGGAPHPDRHPQPRRVCHAAGPRGRAVPASGQAPVPRAR 258
P APQP LP +HG QVR A HPD P PRR A P GRAV ++ Q+ V + R
Sbjct: 76 PAAPQPHLPHVHGTQVRHRARHPDGDPAPRRHRVLARPDGRAVASATQSAVSQPR 240
Score = 45.1 bits (92), Expect(3) = 1e-057
Identities = 19/48 (39%), Positives = 25/48 (52%)
Frame = +2 / +2
Query: 473 LPSPFEALHGVPLVHESTKXXXXXXXXXXXXGVAAHDNLAIGTVIREC 616
+PSPFE +H ES +AAHD++ IGTV+REC
Sbjct: 449 VPSPFEHVHAAAPFDESMTLLDPETDKLFYEALAAHDHMGIGTVLREC 592
Score = 35.4 bits (71), Expect(3) = 1e-057
Identities = 15/28 (53%), Positives = 18/28 (64%)
Frame = +2 / +2
Query: 659 CGRQGNASAAAIVKAFPDIKCTVLNLPR 742
C +A AI KAFP IKC VL+LP+
Sbjct: 629 CCGGDGTTAKAIDKAFPHIKCNVLDLPK 712
Score = 32.2 bits (64), Expect(5) = 2e-022
Identities = 12/24 (50%), Positives = 12/24 (50%)
Frame = +3 / +3
Query: 261 CGCWSRRASSRRPTTCSTG*TRCP 332
CGCW R P ST * RCP
Sbjct: 243 CGCWPNPTPWRAPRPGSTA*PRCP 314
Score = 30.4 bits (60), Expect(2) = 1e-024
Identities = 16/33 (48%), Positives = 18/33 (54%)
Frame = -2 / -2
Query: 480 DGSWRXXXXSFLNQSARDMPAST*WRETVPSTK 382
+G SFLNQSAR P S *+RE S K
Sbjct: 462 NGDGTGSKLSFLNQSARPRPDSM*YREVTASGK 364
Score = 27.6 bits (54), Expect(5) = 2e-022
Identities = 13/32 (40%), Positives = 14/32 (43%)
Frame = +3 / +3
Query: 495 CTGCPSSTRAPSCWTRSWTGSWRKAWPRTTTW 590
CT STRA C T T + WP T W
Sbjct: 471 CTRRRPSTRA*RCSTLRPTSCSTRPWPPMTIW 566
Score = 27.2 bits (53), Expect(5) = 2e-022
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = +2 / +2
Query: 626 VFSGLRSLTYCCGRQGNASAA 688
+ GL+SLT CCG G + A
Sbjct: 599 LXDGLQSLTDCCGGDGTTAKA 661
Score = 25.8 bits (50), Expect(5) = 2e-022
Identities = 13/23 (56%), Positives = 13/23 (56%)
Frame = +1 / +1
Query: 382 LRAGHRLPPLRGGRHVPGRLVQE 450
L AG L G R PGRLVQE
Sbjct: 364 LSAGRDLAVSHGVRSRPGRLVQE 432
>gb|BJ463887.1|BJ463887 BJ463887 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags30o16 5', mRNA sequence
Length = 706
Score = 112 bits (239), Expect(5) = 3e-057
Identities = 47/63 (74%), Positives = 56/63 (88%)
Frame = +2 / +1
Query: 107 SLYYLTSMALKCAVELHIPTAIHNLGGSATLPDLVAALSLPAAKLPFLGRVMRLLVTSGV 286
+LYYLTSM L+CAV+L IPTAIHNLGG ++L DL AALS+PA+K PFLGR+MR LVTSGV
Sbjct: 25 TLYYLTSMGLRCAVKLGIPTAIHNLGGVSSLADLAAALSIPASKQPFLGRLMRALVTSGV 204
Query: 287 FAS 295
FA+
Sbjct: 205 FAN 213
Score = 95.5 bits (202), Expect(5) = 2e-037
Identities = 44/62 (70%), Positives = 48/62 (77%)
Frame = -2 / -3
Query: 291 AKTPDVTSSRITRPRNGSLAAGRDSAATRSGSVADPPRLWMAVGMWSSTAHLSAMDVR** 112
AKTP+VTS+RI RPRNG L AG DSAA RS S PPRLW+AVGM S TA S MDVR**
Sbjct: 209 AKTPEVTSARIRRPRNGCLLAGMDSAAARSASEETPPRLWIAVGMPSLTAQRSPMDVR** 30
Query: 111 RL 106
R+
Sbjct: 29 RV 24
Score = 68.4 bits (143), Expect(5) = 3e-057
Identities = 26/48 (54%), Positives = 36/48 (75%)
Frame = +2 / +1
Query: 311 YRLNPLSWLLVEGVESEDHTYQKYFVLGTVSRHYVEAGMSLADWFKKE 454
+ LNPLS +LV+GV +++H Q FVL SRHY+EA + +ADWFKK+
Sbjct: 244 FGLNPLSRILVDGVVADEHHSQTSFVLAGTSRHYMEAALGMADWFKKD 387
Score = 55.6 bits (115), Expect(5) = 3e-057
Identities = 24/55 (43%), Positives = 30/55 (54%)
Frame = +2 / +1
Query: 452 EEDEDRQLPSPFEALHGVPLVHESTKXXXXXXXXXXXXGVAAHDNLAIGTVIREC 616
++D +PS FE +H L EST G+AAHDNL IGT+IREC
Sbjct: 379 KKDATGPVPSVFEDVHSASLFDESTAALDPELDALVTDGLAAHDNLGIGTIIREC 543
Score = 40.5 bits (82), Expect(5) = 2e-037
Identities = 19/42 (45%), Positives = 23/42 (54%)
Frame = -1 / -2
Query: 442 PVGQGHAGLHVVAGDGAQHEVLLVGVVLRLHALHQQPGQRVQ 317
PV HVV G +QHE L V++R A+HQ GQ VQ
Sbjct: 375 PVSHAQRSFHVVPGRPSQHEGRLAVVLVRDDAVHQDAGQWVQ 250
Score = 39.1 bits (79), Expect(5) = 2e-037
Identities = 19/48 (39%), Positives = 22/48 (45%)
Frame = -2 / -3
Query: 615 HSRMTVPMARLSCAATPXXXXXXXXXXXXXXXSWTRGTPCRASNGDGS 472
HSRM VP+ RLS AA P S R C +SN DG+
Sbjct: 542 HSRMMVPIPRLSWAARPSVTSASSSGSKAAVLSSKRDALCTSSNTDGT 399
Score = 32.7 bits (65), Expect(5) = 3e-057
Identities = 12/22 (54%), Positives = 14/22 (63%)
Frame = +2 / +1
Query: 623 DVFSGLRSLTYCCGRQGNASAA 688
D+F GL SLT CCG G + A
Sbjct: 547 DLFKGLESLTDCCGGDGTTARA 612
Score = 31.3 bits (62), Expect(5) = 2e-037
Identities = 12/20 (60%), Positives = 15/20 (75%)
Frame = -1 / -2
Query: 736 KVEHGALDVWEGLDDGGRAG 677
+++HGALDV GL DG R G
Sbjct: 657 EIQHGALDVRVGLGDGPRRG 598
Score = 28.6 bits (56), Expect(5) = 3e-057
Identities = 10/13 (76%), Positives = 10/13 (76%)
Frame = +1 / +3
Query: 691 HRQGLPRHQVHRA 729
H QG P HQVHRA
Sbjct: 612 HHQGPPAHQVHRA 650
Score = 23.5 bits (45), Expect(5) = 2e-037
Identities = 11/22 (50%), Positives = 12/22 (54%)
Frame = -2 / -3
Query: 687 AALAFPCLPQQ*VSERRPLKTS 622
A P PQQ V + RPLK S
Sbjct: 611 ALAVVPSPPQQSVRDSRPLKRS 546
>gb|BJ467760.1|BJ467760 BJ467760 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags29l10 3', mRNA sequence
Length = 779
Score = 204 bits (440), Expect(2) = 3e-057
Identities = 83/107 (77%), Positives = 95/107 (88%)
Frame = +2 / -2
Query: 785 AQAVMLKLVLHFWSDDDCVKILELCRKAIPSREEGGKVIIIEILLGPYMGPVMYEAQLLM 964
+Q VMLKLVLHFWSD+DCVKIL CRKAIP REEGGKVIIIEI++GP +GPVM+EAQLLM
Sbjct: 526 SQVVMLKLVLHFWSDEDCVKILAQCRKAIPPREEGGKVIIIEIVVGPSLGPVMFEAQLLM 347
Query: 965 DMLMMVNTKGRQRGEDDWRHIFTKAGFSDYKVVKKIGARGVIEVYP* 1105
DMLMMVNT+G QR E+ W +F KAGF+DYK+VKK+GAR VIEVYP*
Sbjct: 346 DMLMMVNTRGGQRDENHWCELFKKAGFTDYKIVKKLGARSVIEVYP* 206
Score = 151 bits (325), Expect(3) = 4e-039
Identities = 71/106 (66%), Positives = 80/106 (75%)
Frame = -2 / +3
Query: 1110 LAYG*TSMTPRAPIFLTTL*SEKPALVKMWRQSSSPRCLPLVLTIMSMSISSWASYMTGP 931
++YG*TSMT RAP F T L*S PA + Q S R PLV TIMS+SI SWAS +TGP
Sbjct: 201 ISYG*TSMTDRAPNFFTIL*SVNPAFLNSSHQ*FSSR*PPLVFTIMSISIRSWASNITGP 380
Query: 930 MYGPRSISMMITFPPSSREGMAFLHSSRILTQSSSLQKCRTSLSMT 793
GP +ISM+ITFPPSSR GMAFLH +RI TQSSSLQKC TSLS+T
Sbjct: 381 KEGPTTISMIITFPPSSRGGMAFLHWARIFTQSSSLQKCSTSLSIT 518
Score = 38.6 bits (78), Expect(2) = 3e-057
Identities = 15/28 (53%), Positives = 20/28 (71%)
Frame = +2 / -2
Query: 659 CGRQGNASAAAIVKAFPDIKCTVLNLPR 742
C +A A+VKA+P IKCTVL+LP+
Sbjct: 682 CCGGDGTTARALVKAYPHIKCTVLDLPK 599
Score = 26.7 bits (52), Expect(3) = 4e-039
Identities = 11/18 (61%), Positives = 13/18 (72%)
Frame = -1 / +2
Query: 736 KVEHGALDVWEGLDDGGR 683
KV+H ALDV LD+G R
Sbjct: 605 KVQHSALDVRISLDEGPR 658
Score = 22.1 bits (42), Expect(3) = 4e-039
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = -2 / +3
Query: 687 AALAFPCLPQQ*VSERRPLKTS 622
A P PQQ V E PLK S
Sbjct: 651 ALAVVPSPPQQSVRESSPLKMS 716
>gb|AV917258.1|AV917258 AV917258 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags18c14 5', mRNA sequence
Length = 582
Score = 198 bits (426), Expect(3) = 3e-057
Identities = 77/107 (71%), Positives = 95/107 (88%)
Frame = +2 / +1
Query: 785 AQAVMLKLVLHFWSDDDCVKILELCRKAIPSREEGGKVIIIEILLGPYMGPVMYEAQLLM 964
+QAVMLKLVLHFWSD+DCVKIL C+KAIP +EGGK+III+I++GP +GP+M+EAQLLM
Sbjct: 205 SQAVMLKLVLHFWSDEDCVKILTQCKKAIPPHDEGGKIIIIDIVIGPSLGPIMFEAQLLM 384
Query: 965 DMLMMVNTKGRQRGEDDWRHIFTKAGFSDYKVVKKIGARGVIEVYP* 1105
DMLMMV T+G QR E+DWR +F +AGF DYK+V+K+GAR VIEVYP*
Sbjct: 385 DMLMMVTTRGVQRSENDWRKLFMEAGFKDYKIVRKLGARCVIEVYP* 525
Score = 146 bits (313), Expect(2) = 4e-037
Identities = 70/106 (66%), Positives = 80/106 (75%)
Frame = -2 / -2
Query: 1107 AYG*TSMTPRAPIFLTTL*SEKPALVKMWRQSSSPRCLPLVLTIMSMSISSWASYMTGPM 928
+YG*TS+T RAP FLT L*S PA + RQS S R PLV+TIMS+SI SWAS + GP
Sbjct: 527 SYG*TSITHRAPSFLTIL*SLNPASMNSLRQSFSLRWTPLVVTIMSISIRSWASNIIGPK 348
Query: 927 YGPRSISMMITFPPSSREGMAFLHSSRILTQSSSLQKCRTSLSMTA 790
GP ++SM+I FPPSS GMAFLH +I TQSSSLQKC TSLSMTA
Sbjct: 347 DGPITMSMIIIFPPSSCGGMAFLHWVKIFTQSSSLQKCSTSLSMTA 210
Score = 34.5 bits (69), Expect(3) = 3e-057
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +2 / +1
Query: 623 DVFSGLRSLTYCCGRQGNASAAAI 694
D+F GL SLT CCG G + A +
Sbjct: 16 DIFKGLESLTDCCGGDGTTARALV 87
Score = 29.5 bits (58), Expect(2) = 4e-037
Identities = 12/18 (66%), Positives = 14/18 (77%)
Frame = -1 / -1
Query: 736 KVEHGALDVWEGLDDGGR 683
KV+HGALDV LD+G R
Sbjct: 126 KVQHGALDVRISLDEGPR 73
Score = 29.0 bits (57), Expect(3) = 3e-057
Identities = 11/15 (73%), Positives = 11/15 (73%)
Frame = +1 / +3
Query: 694 RQGLPRHQVHRAQPS 738
RQGL HQVHR PS
Sbjct: 84 RQGLSAHQVHRVGPS 128
>gb|AV922427.1|AV922427 AV922427 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags18c14 3', mRNA sequence
Length = 530
Score = 198 bits (426), Expect(3) = 3e-057
Identities = 77/107 (71%), Positives = 95/107 (88%)
Frame = +2 / -2
Query: 785 AQAVMLKLVLHFWSDDDCVKILELCRKAIPSREEGGKVIIIEILLGPYMGPVMYEAQLLM 964
+QAVMLKLVLHFWSD+DCVKIL C+KAIP +EGGK+III+I++GP +GP+M+EAQLLM
Sbjct: 337 SQAVMLKLVLHFWSDEDCVKILTQCKKAIPPHDEGGKIIIIDIVIGPSLGPIMFEAQLLM 158
Query: 965 DMLMMVNTKGRQRGEDDWRHIFTKAGFSDYKVVKKIGARGVIEVYP* 1105
DMLMMV T+G QR E+DWR +F +AGF DYK+V+K+GAR VIEVYP*
Sbjct: 157 DMLMMVTTRGVQRSENDWRKLFMEAGFKDYKIVRKLGARCVIEVYP* 17
Score = 146 bits (313), Expect(2) = 4e-037
Identities = 70/106 (66%), Positives = 80/106 (75%)
Frame = -2 / +3
Query: 1107 AYG*TSMTPRAPIFLTTL*SEKPALVKMWRQSSSPRCLPLVLTIMSMSISSWASYMTGPM 928
+YG*TS+T RAP FLT L*S PA + RQS S R PLV+TIMS+SI SWAS + GP
Sbjct: 15 SYG*TSITHRAPSFLTIL*SLNPASMNSLRQSFSLRWTPLVVTIMSISIRSWASNIIGPK 194
Query: 927 YGPRSISMMITFPPSSREGMAFLHSSRILTQSSSLQKCRTSLSMTA 790
GP ++SM+I FPPSS GMAFLH +I TQSSSLQKC TSLSMTA
Sbjct: 195 DGPITMSMIIIFPPSSCGGMAFLHWVKIFTQSSSLQKCSTSLSMTA 332
Score = 34.5 bits (69), Expect(3) = 3e-057
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +2 / -2
Query: 623 DVFSGLRSLTYCCGRQGNASAAAI 694
D+F GL SLT CCG G + A +
Sbjct: 526 DIFKGLESLTDCCGGDGTTARALV 455
Score = 29.5 bits (58), Expect(2) = 4e-037
Identities = 12/18 (66%), Positives = 14/18 (77%)
Frame = -1 / +2
Query: 736 KVEHGALDVWEGLDDGGR 683
KV+HGALDV LD+G R
Sbjct: 416 KVQHGALDVRISLDEGPR 469
Score = 29.0 bits (57), Expect(3) = 3e-057
Identities = 11/15 (73%), Positives = 11/15 (73%)
Frame = +1 / -1
Query: 694 RQGLPRHQVHRAQPS 738
RQGL HQVHR PS
Sbjct: 458 RQGLSAHQVHRVGPS 414
>gb|BF256773.2|BF256773 HVSMEf0010P15f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEf0010P15f, mRNA sequence
Length = 850
Score = 182 bits (392), Expect(3) = 4e-057
Identities = 79/136 (58%), Positives = 100/136 (73%)
Frame = +2 / +2
Query: 47 TAIVPTDAELLQAQADLWRHSLYYLTSMALKCAVELHIPTAIHNLGGSATLPDLVAALSL 226
T VPTDA+L++AQADL RHSL YLTSMAL+CA+EL IPTAI LGG+A+LPDL+AALSL
Sbjct: 26 TMTVPTDAQLIKAQADLQRHSLTYLTSMALRCAIELGIPTAIQRLGGTASLPDLMAALSL 205
Query: 227 PAAKLPFLGRVMRLLVTSGVFASSDDVQYRLNPLSWLLVEGVESEDHTYQKYFVLGTVSR 406
P K PFL RV+RLL S A ++ Y L PLS++LV+GV + Q F L SR
Sbjct: 206 PPPKAPFLSRVLRLLAKSDALACTEAGIYSLTPLSYILVDGVLIDGEARQVTFPLAVTSR 385
Query: 407 HYVEAGMSLADWFKKE 454
+++E+G+ LADWFK +
Sbjct: 386 YHMESGLGLADWFKND 433
Score = 103 bits (219), Expect(3) = 3e-025
Identities = 51/86 (59%), Positives = 57/86 (66%)
Frame = -2 / -2
Query: 303 SSDDAKTPDVTSSRITRPRNGSLAAGRDSAATRSGSVADPPRLWMAVGMWSSTAHLSAMD 124
+S A+ D+ SSR TR RNG+L G DSAA RSG A PPR W+AVGM SS AHLSAMD
Sbjct: 282 ASVHARASDLASSRRTRLRNGALGGGSDSAAIRSGKDAVPPRRWIAVGMPSSMAHLSAMD 103
Query: 123 VR**RLWRHRXXXXXXXXXSVGTMAV 46
VR* RLWR R SVGT+ V
Sbjct: 102 VR*VRLWRCRSACALISWASVGTVIV 25
Score = 64.8 bits (135), Expect(5) = 1e-023
Identities = 29/55 (52%), Positives = 34/55 (61%)
Frame = +1 / +1
Query: 94 PVAPQPLLPDIHGAQVRGGAPHPDRHPQPRRVCHAAGPRGRAVPASGQAPVPRAR 258
P APQP LP +HG QVR A HPD P PRR A P GRAV ++ Q+ V + R
Sbjct: 73 PAAPQPHLPHVHGTQVRHRARHPDGDPAPRRHRVLARPDGRAVASATQSAVSQPR 237
Score = 45.1 bits (92), Expect(3) = 4e-057
Identities = 19/48 (39%), Positives = 25/48 (52%)
Frame = +2 / +2
Query: 473 LPSPFEALHGVPLVHESTKXXXXXXXXXXXXGVAAHDNLAIGTVIREC 616
+PSPFE +H ES +AAHD++ IGTV+REC
Sbjct: 446 VPSPFEHVHAAAPFDESMTLLDPETDKLFYEALAAHDHMGIGTVLREC 589
Score = 33.6 bits (67), Expect(3) = 4e-057
Identities = 14/28 (50%), Positives = 17/28 (60%)
Frame = +2 / +2
Query: 659 CGRQGNASAAAIVKAFPDIKCTVLNLPR 742
C +A AIVKAFP IKC V+ P+
Sbjct: 626 CCGGDGTTARAIVKAFPHIKCNVVGPPK 709
Score = 32.2 bits (64), Expect(5) = 1e-023
Identities = 12/24 (50%), Positives = 12/24 (50%)
Frame = +3 / +3
Query: 261 CGCWSRRASSRRPTTCSTG*TRCP 332
CGCW R P ST * RCP
Sbjct: 240 CGCWPNPTPWRAPRPGSTA*PRCP 311
Score = 31.3 bits (62), Expect(5) = 1e-023
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = +2 / +2
Query: 626 VFSGLRSLTYCCGRQGNASAAAI 694
+F GL+SLT CCG G + A +
Sbjct: 596 LFDGLQSLTDCCGGDGTTARAIV 664
Score = 30.4 bits (60), Expect(3) = 3e-025
Identities = 16/33 (48%), Positives = 18/33 (54%)
Frame = -2 / -2
Query: 480 DGSWRXXXXSFLNQSARDMPAST*WRETVPSTK 382
+G SFLNQSAR P S *+RE S K
Sbjct: 459 NGDGTGSKLSFLNQSARPRPDSM*YREVTASGK 361
Score = 27.6 bits (54), Expect(5) = 1e-023
Identities = 13/32 (40%), Positives = 14/32 (43%)
Frame = +3 / +3
Query: 495 CTGCPSSTRAPSCWTRSWTGSWRKAWPRTTTW 590
CT STRA C T T + WP T W
Sbjct: 468 CTRRRPSTRA*RCSTLRPTSCSTRPWPPMTIW 563
Score = 25.8 bits (50), Expect(5) = 1e-023
Identities = 13/23 (56%), Positives = 13/23 (56%)
Frame = +1 / +1
Query: 382 LRAGHRLPPLRGGRHVPGRLVQE 450
L AG L G R PGRLVQE
Sbjct: 361 LSAGRDLAVSHGVRSRPGRLVQE 429
Score = 25.4 bits (49), Expect(3) = 3e-025
Identities = 10/14 (71%), Positives = 12/14 (85%)
Frame = -2 / -2
Query: 720 HLMSGKALTMAAAL 679
HL+ GKALTMA A+
Sbjct: 687 HLICGKALTMALAV 646
>gb|BF628014.2|BF628014 HVSMEb0002J23f Hordeum vulgare seedling shoot EST library
HVcDNA0002 (Dehydration stress) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEb0002J23f, mRNA sequence
Length = 665
Score = 145 bits (311), Expect(4) = 5e-057
Identities = 61/80 (76%), Positives = 70/80 (87%)
Frame = +2 / +3
Query: 56 VPTDAELLQAQADLWRHSLYYLTSMALKCAVELHIPTAIHNLGGSATLPDLVAALSLPAA 235
VP AELLQAQADLWRH+LYYLTSM L+CAV+L IPTAIHNL G ++L DL AALS+PA+
Sbjct: 75 VPKGAELLQAQADLWRHTLYYLTSMGLRCAVKLGIPTAIHNLSGVSSLADLAAALSIPAS 254
Query: 236 KLPFLGRVMRLLVTSGVFAS 295
K PFLGR+MR LVTSGVFA+
Sbjct: 255 KQPFLGRLMRALVTSGVFAN 314
Score = 106 bits (226), Expect(3) = 8e-032
Identities = 49/79 (62%), Positives = 54/79 (68%)
Frame = -2 / -2
Query: 291 AKTPDVTSSRITRPRNGSLAAGRDSAATRSGSVADPPRLWMAVGMWSSTAHLSAMDVR** 112
AKTP+VTS+RI RPRNG L AG DSAA RS S P RLW+AVGM S TA S MDVR**
Sbjct: 310 AKTPEVTSARIRRPRNGCLLAGMDSAAARSASEETPLRLWIAVGMPSLTAQRSPMDVR** 131
Query: 111 RLWRHRXXXXXXXXXSVGT 55
R+WRHR +GT
Sbjct: 130 RVWRHRSACACRSSAPLGT 74
Score = 93.6 bits (198), Expect(3) = 2e-023
Identities = 45/78 (57%), Positives = 52/78 (66%)
Frame = -1 / -1
Query: 289 EDARRDQQPHHAPEERELGRWQGQRGHEVRQRGRPA*VVDGGRDVELHRALERHGCQVVE 110
EDA DQ+ H A +ER L GQRG +V QRG PA VVD RD EL A E HG +VV+
Sbjct: 308 EDA*GDQRAHQAAKERLLACGDGQRGRQVSQRGDPAEVVDRRRDAELDGAAEPHGREVVK 129
Query: 109 AVAPQVGLRLQQLGVRGN 56
VAPQVGL LQ+LG G+
Sbjct: 128 GVAPQVGLCLQELGTLGD 75
Score = 68.4 bits (143), Expect(4) = 5e-057
Identities = 26/48 (54%), Positives = 36/48 (75%)
Frame = +2 / +3
Query: 311 YRLNPLSWLLVEGVESEDHTYQKYFVLGTVSRHYVEAGMSLADWFKKE 454
+ LNPLS +LV+GV +++H Q FVL SRHY+EA + +ADWFKK+
Sbjct: 345 FGLNPLSRILVDGVVADEHHSQTSFVLAGTSRHYMEAALGMADWFKKD 488
Score = 40.5 bits (82), Expect(3) = 8e-032
Identities = 19/42 (45%), Positives = 23/42 (54%)
Frame = -1 / -1
Query: 442 PVGQGHAGLHVVAGDGAQHEVLLVGVVLRLHALHQQPGQRVQ 317
PV HVV G +QHE L V++R A+HQ GQ VQ
Sbjct: 476 PVSHAQRSFHVVPGRPSQHEGRLAVVLVRDDAVHQDAGQWVQ 351
Score = 39.6 bits (80), Expect(4) = 5e-057
Identities = 14/17 (82%), Positives = 16/17 (94%)
Frame = +2 / +1
Query: 566 GVAAHDNLAIGTVIREC 616
G+AAHDNL IGT+IREC
Sbjct: 595 GLAAHDNLGIGTIIREC 645
Score = 29.0 bits (57), Expect(3) = 8e-032
Identities = 12/17 (70%), Positives = 13/17 (76%)
Frame = -2 / -1
Query: 615 HSRMTVPMARLSCAATP 565
HSRM VP+ RLS AA P
Sbjct: 644 HSRMMVPIPRLSWAARP 594
Score = 28.6 bits (56), Expect(3) = 2e-023
Identities = 14/26 (53%), Positives = 15/26 (57%)
Frame = -2 / -2
Query: 450 FLNQSARDMPAST*WRETVPSTKYFW 373
FLNQSA AS * R+ STK W
Sbjct: 484 FLNQSAMPSAASM*CRDVPASTKDVW 407
Score = 25.8 bits (50), Expect(4) = 5e-057
Identities = 10/18 (55%), Positives = 11/18 (61%)
Frame = +3 / +2
Query: 534 WTRSWTGSWRKAWPRTTT 587
WTRS T + WP TTT
Sbjct: 563 WTRSSTHWAQMVWPPTTT 616
Score = 24.9 bits (48), Expect(3) = 2e-023
Identities = 10/14 (71%), Positives = 11/14 (78%)
Frame = -1 / -3
Query: 613 LPYDGPDGQVVVRG 572
LP DGPD +VVV G
Sbjct: 642 LPDDGPDPKVVVGG 601
>gb|BF259024.3|BF259024 HVSMEf0017H01f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEf0017H01f, mRNA sequence
Length = 804
Score = 205 bits (442), Expect(2) = 1e-056
Identities = 87/135 (64%), Positives = 106/135 (78%)
Frame = +2 / +1
Query: 56 VPTDAELLQAQADLWRHSLYYLTSMALKCAVELHIPTAIHNLGGSATLPDLVAALSLPAA 235
VPTDAELLQAQ+DLWRHSL YLT M+L+CAV+L +PTAIH LGG+A+ +LVAALSLPA+
Sbjct: 82 VPTDAELLQAQSDLWRHSLCYLTPMSLRCAVDLGVPTAIHRLGGAASPSELVAALSLPAS 261
Query: 236 KLPFLGRVMRLLVTSGVFASSDDVQYRLNPLSWLLVEGVESEDHTYQKYFVLGTVSRHYV 415
KLPFL R++R L T+GVF S+D YRLNPLS+LLV+GV + Q V SR+YV
Sbjct: 262 KLPFLARLLRQLATAGVFTSTDAGTYRLNPLSYLLVDGVRIDGDASQTAIVRAAASRYYV 441
Query: 416 EAGMSLADWFKKEED 460
EA M LADWF+K+ D
Sbjct: 442 EADMGLADWFRKDFD 486
Score = 130 bits (279), Expect = 1e-029
Identities = 64/129 (49%), Positives = 79/129 (61%)
Frame = -1 / -1
Query: 442 PVGQGHAGLHVVAGDGAQHEVLLVGVVLRLHALHQQPGQRVQPVLHVVGRREDARRDQQP 263
PVGQ H LHVVA H+ L GV + A+H++ +RV+ V VG EDARR +
Sbjct: 468 PVGQAHVRLHVVARGRGAHDGRLAGVAVDADAVHEEVRERVEAVRSGVGGGEDARRGELA 289
Query: 262 HHAPEERELGRWQGQRGHEVRQRGRPA*VVDGGRDVELHRALERHGCQVVEAVAPQVGLR 83
A EER+LGR QGQ G + + A VDG D E+ A ERHG +V EAVAPQVGLR
Sbjct: 288 QQAGEERQLGRGQGQGGDQFGRGRGAAEAVDGRGDAEVDGAAERHGREVAEAVAPQVGLR 109
Query: 82 LQQLGVRGN 56
L+QL V G+
Sbjct: 108 LEQLRVGGD 82
Score = 98.7 bits (209), Expect(2) = 2e-024
Identities = 50/87 (57%), Positives = 52/87 (59%)
Frame = -2 / -2
Query: 315 RYCTSSDDAKTPDVTSSRITRPRNGSLAAGRDSAATRSGSVADPPRLWMAVGMWSSTAHL 136
RY +S + KTP V S R R RNGSL AGRD AAT S A PPR WMAVG STA
Sbjct: 341 RYVPASVEVKTPAVASWRSRRARNGSLDAGRDRAATSSDGDAAPPRRWMAVGTPRSTAQR 162
Query: 135 SAMDVR**RLWRHRXXXXXXXXXSVGT 55
S M VR* RLWRHR SVGT
Sbjct: 161 SDMGVR*QRLWRHRSDCAWSSSASVGT 81
Score = 35.9 bits (72), Expect(2) = 1e-056
Identities = 16/44 (36%), Positives = 21/44 (47%)
Frame = +2 / +1
Query: 455 EDEDRQLPSPFEALHGVPLVHESTKXXXXXXXXXXXXGVAAHDN 586
+D D +PSPFE +HG + ES VAAHD+
Sbjct: 475 KDFDGAVPSPFEDMHGAAIFEESMALLDPEMDQLIHDAVAAHDH 606
Score = 34.5 bits (69), Expect(2) = 2e-024
Identities = 18/38 (47%), Positives = 20/38 (52%)
Frame = -2 / -2
Query: 486 NGDGSWRXXXXSFLNQSARDMPAST*WRETVPSTKYFW 373
+ +G SFLNQSAR M AST* RE T W
Sbjct: 512 SSNGEGTAPSKSFLNQSARPMSAST**REAAARTMAVW 399
>gb|BJ468335.1|BJ468335 BJ468335 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags38e18 3', mRNA sequence
Length = 744
Score = 198 bits (426), Expect(3) = 2e-056
Identities = 79/105 (75%), Positives = 93/105 (88%)
Frame = +2 / -3
Query: 785 AQAVMLKLVLHFWSDDDCVKILELCRKAIPSREEGGKVIIIEILLGPYMGPVMYEAQLLM 964
AQAVMLKLVLH WSDDDCVKIL C+ AIPSREEGGKVI+I+I++ P +GPVM+EAQ LM
Sbjct: 526 AQAVMLKLVLHHWSDDDCVKILTQCKNAIPSREEGGKVIVIDIVVEPSLGPVMFEAQTLM 347
Query: 965 DMLMMVNTKGRQRGEDDWRHIFTKAGFSDYKVVKKIGARGVIEVY 1099
D+LM+V T+GRQR E DW +FTKAGFSDYK+VK++GARGVIEVY
Sbjct: 346 DILMLVFTRGRQRSESDWHVLFTKAGFSDYKIVKRLGARGVIEVY 212
Score = 135 bits (289), Expect(3) = 2e-033
Identities = 70/103 (67%), Positives = 74/103 (71%)
Frame = -2 / +3
Query: 1098 *TSMTPRAPIFLTTL*SEKPALVKMWRQSSSPRCLPLVLTIMSMSISSWASYMTGPMYGP 919
*TS+TPRAP LT L*S PALV QS S R PLV T MSMSI AS MTGP G
Sbjct: 213 *TSITPRAPSLLTIL*SLNPALVNNTCQSLSLR*RPLVKTSMSMSIRVCASNMTGPNDGS 392
Query: 918 RSISMMITFPPSSREGMAFLHSSRILTQSSSLQKCRTSLSMTA 790
++SM ITFPPSSREGMAFLH RI TQSSSLQ C TSLS+TA
Sbjct: 393 TTMSMTITFPPSSREGMAFLHWVRIFTQSSSLQWCNTSLSITA 521
Score = 32.7 bits (65), Expect(3) = 2e-056
Identities = 12/22 (54%), Positives = 14/22 (63%)
Frame = +2 / -2
Query: 623 DVFSGLRSLTYCCGRQGNASAA 688
D+F GL SLT CCG G + A
Sbjct: 716 DLFKGLESLTDCCGGDGTTARA 651
Score = 28.6 bits (56), Expect(3) = 2e-056
Identities = 10/15 (66%), Positives = 13/15 (86%)
Frame = +2 / -3
Query: 698 KAFPDIKCTVLNLPR 742
+A P IKCTVL+LP+
Sbjct: 643 RAHPHIKCTVLDLPK 599
Score = 23.5 bits (45), Expect(3) = 2e-033
Identities = 11/22 (50%), Positives = 12/22 (54%)
Frame = -2 / +1
Query: 687 AALAFPCLPQQ*VSERRPLKTS 622
A P PQQ V + RPLK S
Sbjct: 652 ALAVVPSPPQQSVRDSRPLKRS 717
Score = 22.6 bits (43), Expect(3) = 2e-033
Identities = 6/14 (42%), Positives = 11/14 (78%)
Frame = -1 / +2
Query: 736 KVEHGALDVWEGLD 695
K+EH L +W+G++
Sbjct: 503 KLEHHRLSLWDGVE 544
>gb|AL504343.1|AL504343 AL504343 Hordeum vulgare Barke roots Hordeum vulgare subsp. vulgare
cDNA clone HW04P19V 5', mRNA sequence
Length = 660
Score = 182 bits (392), Expect(3) = 8e-056
Identities = 79/136 (58%), Positives = 100/136 (73%)
Frame = +2 / +2
Query: 47 TAIVPTDAELLQAQADLWRHSLYYLTSMALKCAVELHIPTAIHNLGGSATLPDLVAALSL 226
T VPTDA+L++AQADL RHSL YLTSMAL+CA+EL IPTAI LGG+A+LPDL+AALSL
Sbjct: 38 TMTVPTDAQLIKAQADLQRHSLTYLTSMALRCAIELGIPTAIQRLGGTASLPDLMAALSL 217
Query: 227 PAAKLPFLGRVMRLLVTSGVFASSDDVQYRLNPLSWLLVEGVESEDHTYQKYFVLGTVSR 406
P K PFL RV+RLL S A ++ Y L PLS++LV+GV + Q F L SR
Sbjct: 218 PPPKAPFLSRVLRLLAKSDALACTEAGIYSLTPLSYILVDGVLIDGEARQVAFPLAVTSR 397
Query: 407 HYVEAGMSLADWFKKE 454
+++E+G+ LADWFK +
Sbjct: 398 YHMESGLGLADWFKND 445
Score = 107 bits (229), Expect = 1e-022
Identities = 58/129 (44%), Positives = 74/129 (57%)
Frame = -1 / -3
Query: 442 PVGQGHAGLHVVAGDGAQHEVLLVGVVLRLHALHQQPGQRVQPVLHVVGRREDARRDQQP 263
P+GQ LHV+ Q + L + + +A+H+ GQR Q V +G R+ QQP
Sbjct: 433 PIGQA*T*LHVIPRGHGQRKGHLPSLAVDEYAIHEDVGQRGQAVDPGLGARQGVGFGQQP 254
Query: 262 HHAPEERELGRWQGQRGHEVRQRGRPA*VVDGGRDVELHRALERHGCQVVEAVAPQVGLR 83
A E+R LG + QRGH+VRQR A +D RD EL A E HG +V EAVA QV LR
Sbjct: 253 QDAAEKRRLGWRKRQRGHQVRQRRGAAEALDRRRDAELDGAPECHGREVGEAVALQVSLR 74
Query: 82 LQQLGVRGN 56
L QLGV G+
Sbjct: 73 LDQLGVGGD 47
Score = 103 bits (220), Expect(2) = 7e-025
Identities = 51/86 (59%), Positives = 58/86 (67%)
Frame = -2 / -1
Query: 303 SSDDAKTPDVTSSRITRPRNGSLAAGRDSAATRSGSVADPPRLWMAVGMWSSTAHLSAMD 124
+S A+ D+ SSR TR RNG+L G DSAA RSG+ A PPR W+AVGM SS AHLSAMD
Sbjct: 294 ASVHARASDLASSRRTRLRNGALGGGSDSAAIRSGNDAVPPRRWIAVGMPSSMAHLSAMD 115
Query: 123 VR**RLWRHRXXXXXXXXXSVGTMAV 46
VR* RLWR R SVGT+ V
Sbjct: 114 VR*VRLWRCRSACALISWASVGTVIV 37
Score = 46.0 bits (94), Expect(3) = 8e-056
Identities = 20/55 (36%), Positives = 27/55 (49%)
Frame = +2 / +2
Query: 452 EEDEDRQLPSPFEALHGVPLVHESTKXXXXXXXXXXXXGVAAHDNLAIGTVIREC 616
+ D +PSPFE +H ES +AAHD++ IGTV+REC
Sbjct: 437 KNDNALPVPSPFEHVHAAAPFDESMTLLDPDTDKLFYEALAAHDHMGIGTVLREC 601
Score = 30.9 bits (61), Expect(2) = 7e-025
Identities = 16/33 (48%), Positives = 18/33 (54%)
Frame = -2 / -1
Query: 480 DGSWRXXXXSFLNQSARDMPAST*WRETVPSTK 382
+G SFLNQSAR P S *+RE S K
Sbjct: 471 NGDGTGSALSFLNQSARPRPDSM*YREVTASGK 373
Score = 28.6 bits (56), Expect(3) = 8e-056
Identities = 10/16 (62%), Positives = 12/16 (75%)
Frame = +2 / +2
Query: 626 VFSGLRSLTYCCGRQG 673
+F GL+SLT CCG G
Sbjct: 608 LFDGLQSLTDCCGGDG 655
>gb|BJ463550.1|BJ463550 BJ463550 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags32h07 5', mRNA sequence
Length = 540
Score = 204 bits (440), Expect(2) = 3e-055
Identities = 83/107 (77%), Positives = 95/107 (88%)
Frame = +2 / +2
Query: 785 AQAVMLKLVLHFWSDDDCVKILELCRKAIPSREEGGKVIIIEILLGPYMGPVMYEAQLLM 964
+Q VMLKLVLHFWSD+DCVKIL CRKAIP REEGGKVIIIEI++GP +GPVM+EAQLLM
Sbjct: 149 SQVVMLKLVLHFWSDEDCVKILAQCRKAIPPREEGGKVIIIEIVVGPSLGPVMFEAQLLM 328
Query: 965 DMLMMVNTKGRQRGEDDWRHIFTKAGFSDYKVVKKIGARGVIEVYP* 1105
DMLMMVNT+G QR E+ W +F KAGF+DYK+VKK+GAR VIEVYP*
Sbjct: 329 DMLMMVNTRGGQRDENHWCELFKKAGFTDYKIVKKLGARSVIEVYP* 469
Score = 151 bits (325), Expect = 6e-036
Identities = 71/106 (66%), Positives = 80/106 (75%)
Frame = -2 / -1
Query: 1110 LAYG*TSMTPRAPIFLTTL*SEKPALVKMWRQSSSPRCLPLVLTIMSMSISSWASYMTGP 931
++YG*TSMT RAP F T L*S PA + Q S R PLV TIMS+SI SWAS +TGP
Sbjct: 474 ISYG*TSMTDRAPNFFTIL*SVNPAFLNSSHQ*FSSR*PPLVFTIMSISIRSWASNITGP 295
Query: 930 MYGPRSISMMITFPPSSREGMAFLHSSRILTQSSSLQKCRTSLSMT 793
GP +ISM+ITFPPSSR GMAFLH +RI TQSSSLQKC TSLS+T
Sbjct: 294 KEGPTTISMIITFPPSSRGGMAFLHWARIFTQSSSLQKCSTSLSIT 157
Score = 31.8 bits (63), Expect(2) = 3e-055
Identities = 11/15 (73%), Positives = 14/15 (93%)
Frame = +2 / +3
Query: 698 KAFPDIKCTVLNLPR 742
KA+P IKCTVL+LP+
Sbjct: 33 KAYPHIKCTVLDLPK 77
>gb|CB882435.1|CB882435 HL01N17w HL Hordeum vulgare subsp. vulgare cDNA clone HL01N17
3-PRIME, mRNA sequence
Length = 553
Score = 205 bits (443), Expect(2) = 5e-055
Identities = 87/135 (64%), Positives = 106/135 (78%)
Frame = +2 / +2
Query: 56 VPTDAELLQAQADLWRHSLYYLTSMALKCAVELHIPTAIHNLGGSATLPDLVAALSLPAA 235
VPTDAELLQAQ+DLWRHSL YLT M+L+CAV+L +PTAIH LGG+A+ +LVAALSLPA+
Sbjct: 86 VPTDAELLQAQSDLWRHSLCYLTPMSLRCAVDLGVPTAIHRLGGAASPSELVAALSLPAS 265
Query: 236 KLPFLGRVMRLLVTSGVFASSDDVQYRLNPLSWLLVEGVESEDHTYQKYFVLGTVSRHYV 415
KLPFL R++R L T+GVF S+D YRLNPLS+LLV+GV + Q V SR+YV
Sbjct: 266 KLPFLARLLRQLATAGVFTSTDAGTYRLNPLSYLLVDGVRIDGDASQTAIVRAAASRYYV 445
Query: 416 EAGMSLADWFKKEED 460
EA M LADWF+K+ D
Sbjct: 446 EAAMGLADWFRKDFD 490
Score = 130 bits (279), Expect = 1e-029
Identities = 64/129 (49%), Positives = 79/129 (61%)
Frame = -1 / -1
Query: 442 PVGQGHAGLHVVAGDGAQHEVLLVGVVLRLHALHQQPGQRVQPVLHVVGRREDARRDQQP 263
PVGQ H LHVVA H+ L GV + A+H++ +RV+ V VG EDARR +
Sbjct: 472 PVGQAHGRLHVVARGRGAHDGRLAGVAVDADAVHEEVRERVEAVRSGVGGGEDARRGELA 293
Query: 262 HHAPEERELGRWQGQRGHEVRQRGRPA*VVDGGRDVELHRALERHGCQVVEAVAPQVGLR 83
A EER+LGR QGQ G + + A VDG D E+ A ERHG +V EAVAPQVGLR
Sbjct: 292 QQAGEERQLGRGQGQGGDQFGRGRGAAEAVDGRGDAEVDGAAERHGREVAEAVAPQVGLR 113
Query: 82 LQQLGVRGN 56
L+QL V G+
Sbjct: 112 LEQLRVGGD 86
Score = 98.7 bits (209), Expect(2) = 1e-024
Identities = 50/87 (57%), Positives = 52/87 (59%)
Frame = -2 / -2
Query: 315 RYCTSSDDAKTPDVTSSRITRPRNGSLAAGRDSAATRSGSVADPPRLWMAVGMWSSTAHL 136
RY +S + KTP V S R R RNGSL AGRD AAT S A PPR WMAVG STA
Sbjct: 345 RYVPASVEVKTPAVASWRSRRARNGSLDAGRDRAATSSDGDAAPPRRWMAVGTPRSTAQR 166
Query: 135 SAMDVR**RLWRHRXXXXXXXXXSVGT 55
S M VR* RLWRHR SVGT
Sbjct: 165 SDMGVR*QRLWRHRSDCAWSSSASVGT 85
Score = 35.0 bits (70), Expect(2) = 1e-024
Identities = 18/39 (46%), Positives = 21/39 (53%)
Frame = -2 / -2
Query: 489 SNGDGSWRXXXXSFLNQSARDMPAST*WRETVPSTKYFW 373
++ +G SFLNQSAR M AST* RE T W
Sbjct: 519 TSSNGEGTAPSKSFLNQSARPMAAST**REAAARTMAVW 403
Score = 29.9 bits (59), Expect(2) = 5e-055
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = +2 / +2
Query: 455 EDEDRQLPSPFEALHGVPLVHES 523
+D D +PSPFE +HG + ES
Sbjct: 479 KDFDGAVPSPFEDVHGAAIFEES 547
>gb|BF260349.2|BF260349 HVSMEf0021M05f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEf0021M05f, mRNA sequence
Length = 543
Score = 205 bits (443), Expect(2) = 5e-055
Identities = 87/135 (64%), Positives = 106/135 (78%)
Frame = +2 / +1
Query: 56 VPTDAELLQAQADLWRHSLYYLTSMALKCAVELHIPTAIHNLGGSATLPDLVAALSLPAA 235
VPTDAELLQAQ+DLWRHSL YLT M+L+CAV+L +PTAIH LGG+A+ +LVAALSLPA+
Sbjct: 67 VPTDAELLQAQSDLWRHSLCYLTPMSLRCAVDLGVPTAIHRLGGAASPSELVAALSLPAS 246
Query: 236 KLPFLGRVMRLLVTSGVFASSDDVQYRLNPLSWLLVEGVESEDHTYQKYFVLGTVSRHYV 415
KLPFL R++R L T+GVF S+D YRLNPLS+LLV+GV + Q V SR+YV
Sbjct: 247 KLPFLARLLRQLATAGVFTSTDAGTYRLNPLSYLLVDGVRIDGDASQTAIVRAAASRYYV 426
Query: 416 EAGMSLADWFKKEED 460
EA M LADWF+K+ D
Sbjct: 427 EAAMGLADWFRKDFD 471
Score = 130 bits (279), Expect = 1e-029
Identities = 64/129 (49%), Positives = 79/129 (61%)
Frame = -1 / -1
Query: 442 PVGQGHAGLHVVAGDGAQHEVLLVGVVLRLHALHQQPGQRVQPVLHVVGRREDARRDQQP 263
PVGQ H LHVVA H+ L GV + A+H++ +RV+ V VG EDARR +
Sbjct: 453 PVGQAHGRLHVVARGRGAHDGRLAGVAVDADAVHEEVRERVEAVRSGVGGGEDARRGELA 274
Query: 262 HHAPEERELGRWQGQRGHEVRQRGRPA*VVDGGRDVELHRALERHGCQVVEAVAPQVGLR 83
A EER+LGR QGQ G + + A VDG D E+ A ERHG +V EAVAPQVGLR
Sbjct: 273 QQAGEERQLGRGQGQGGDQFGRGRGAAEAVDGRGDAEVDGAAERHGREVAEAVAPQVGLR 94
Query: 82 LQQLGVRGN 56
L+QL V G+
Sbjct: 93 LEQLRVGGD 67
Score = 98.7 bits (209), Expect(2) = 1e-024
Identities = 50/87 (57%), Positives = 52/87 (59%)
Frame = -2 / -2
Query: 315 RYCTSSDDAKTPDVTSSRITRPRNGSLAAGRDSAATRSGSVADPPRLWMAVGMWSSTAHL 136
RY +S + KTP V S R R RNGSL AGRD AAT S A PPR WMAVG STA
Sbjct: 326 RYVPASVEVKTPAVASWRSRRARNGSLDAGRDRAATSSDGDAAPPRRWMAVGTPRSTAQR 147
Query: 135 SAMDVR**RLWRHRXXXXXXXXXSVGT 55
S M VR* RLWRHR SVGT
Sbjct: 146 SDMGVR*QRLWRHRSDCAWSSSASVGT 66
Score = 35.0 bits (70), Expect(2) = 1e-024
Identities = 18/39 (46%), Positives = 21/39 (53%)
Frame = -2 / -2
Query: 489 SNGDGSWRXXXXSFLNQSARDMPAST*WRETVPSTKYFW 373
++ +G SFLNQSAR M AST* RE T W
Sbjct: 500 TSSNGEGTAPSKSFLNQSARPMAAST**REAAARTMAVW 384
Score = 29.9 bits (59), Expect(2) = 5e-055
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = +2 / +1
Query: 455 EDEDRQLPSPFEALHGVPLVHES 523
+D D +PSPFE +HG + ES
Sbjct: 460 KDFDGAVPSPFEDVHGAAIFEES 528
>gb|BJ466406.1|BJ466406 BJ466406 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags31p18 3', mRNA sequence
Length = 613
Score = 200 bits (431), Expect(2) = 7e-055
Identities = 80/108 (74%), Positives = 96/108 (88%)
Frame = +2 / -2
Query: 785 AQAVMLKLVLHFWSDDDCVKILELCRKAIPSREEGGKVIIIEILLGPYMGPVMYEAQLLM 964
AQAVMLKLVLH WSDDDCVKIL C+ AIPSREEGGKVI+I+I++ P +GPVM+EAQ LM
Sbjct: 474 AQAVMLKLVLHHWSDDDCVKILTQCKNAIPSREEGGKVIVIDIVVEPSLGPVMFEAQTLM 295
Query: 965 DMLMMVNTKGRQRGEDDWRHIFTKAGFSDYKVVKKIGARGVIEVYP*A 1108
DMLM+V T+GRQR E+DWR +F KAGF+DYK++KK+GARGVIEVY *+
Sbjct: 294 DMLMLVFTRGRQRSENDWRDLFMKAGFTDYKIIKKMGARGVIEVYK*S 151
Score = 149 bits (320), Expect(2) = 1e-036
Identities = 74/105 (70%), Positives = 78/105 (74%)
Frame = -2 / +2
Query: 1104 YG*TSMTPRAPIFLTTL*SEKPALVKMWRQSSSPRCLPLVLTIMSMSISSWASYMTGPMY 925
Y *TSMTPRAPIFL L*S PA +K RQS S R PLV T MSMS+ WAS MTGP
Sbjct: 155 YL*TSMTPRAPIFLIIL*SVNPAFMKRSRQSFSLR*RPLVNTSMSMSMRVWASNMTGPND 334
Query: 924 GPRSISMMITFPPSSREGMAFLHSSRILTQSSSLQKCRTSLSMTA 790
G +ISM ITFPPSSREGMAFLH RI TQSSSLQ C TSLS+TA
Sbjct: 335 GSTTISMTITFPPSSREGMAFLHWVRIFTQSSSLQWCSTSLSITA 469
Score = 35.0 bits (70), Expect(2) = 7e-055
Identities = 13/21 (61%), Positives = 17/21 (80%)
Frame = +2 / -2
Query: 680 SAAAIVKAFPDIKCTVLNLPR 742
+A AI KA P +KCTVL+LP+
Sbjct: 609 TARAITKAHPHVKCTVLDLPK 547
Score = 24.9 bits (48), Expect(2) = 1e-036
Identities = 10/18 (55%), Positives = 13/18 (72%)
Frame = -1 / +1
Query: 736 KVEHGALDVWEGLDDGGR 683
+++HGALDV L DG R
Sbjct: 553 EIQHGALDVRVCLGDGPR 606
>gb|AV921748.1|AV921748 AV921748 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags12j23 3', mRNA sequence
Length = 659
Score = 204 bits (440), Expect(2) = 6e-054
Identities = 83/107 (77%), Positives = 95/107 (88%)
Frame = +2 / -1
Query: 785 AQAVMLKLVLHFWSDDDCVKILELCRKAIPSREEGGKVIIIEILLGPYMGPVMYEAQLLM 964
+Q VMLKLVLHFWSD+DCVKIL CRKAIP REEGGKVIIIEI++GP +GPVM+EAQLLM
Sbjct: 548 SQVVMLKLVLHFWSDEDCVKILAQCRKAIPPREEGGKVIIIEIVVGPSLGPVMFEAQLLM 369
Query: 965 DMLMMVNTKGRQRGEDDWRHIFTKAGFSDYKVVKKIGARGVIEVYP* 1105
DMLMMVNT+G QR E+ W +F KAGF+DYK+VKK+GAR VIEVYP*
Sbjct: 368 DMLMMVNTRGGQRDENHWCELFKKAGFTDYKIVKKLGARSVIEVYP* 228
Score = 151 bits (325), Expect = 6e-036
Identities = 71/106 (66%), Positives = 80/106 (75%)
Frame = -2 / +1
Query: 1110 LAYG*TSMTPRAPIFLTTL*SEKPALVKMWRQSSSPRCLPLVLTIMSMSISSWASYMTGP 931
++YG*TSMT RAP F T L*S PA + Q S R PLV TIMS+SI SWAS +TGP
Sbjct: 223 ISYG*TSMTDRAPNFFTIL*SVNPAFLNSSHQ*FSSR*PPLVFTIMSISIRSWASNITGP 402
Query: 930 MYGPRSISMMITFPPSSREGMAFLHSSRILTQSSSLQKCRTSLSMT 793
GP +ISM+ITFPPSSR GMAFLH +RI TQSSSLQKC TSLS+T
Sbjct: 403 KEGPTTISMIITFPPSSRGGMAFLHWARIFTQSSSLQKCSTSLSIT 540
Score = 27.6 bits (54), Expect(2) = 6e-054
Identities = 9/13 (69%), Positives = 12/13 (92%)
Frame = +2 / -1
Query: 704 FPDIKCTVLNLPR 742
+P IKCTVL+LP+
Sbjct: 659 YPHIKCTVLDLPK 621
>gb|BJ468231.1|BJ468231 BJ468231 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags37m03 3', mRNA sequence
Length = 626
Score = 204 bits (440), Expect(2) = 6e-054
Identities = 83/107 (77%), Positives = 95/107 (88%)
Frame = +2 / -3
Query: 785 AQAVMLKLVLHFWSDDDCVKILELCRKAIPSREEGGKVIIIEILLGPYMGPVMYEAQLLM 964
+Q VMLKLVLHFWSD+DCVKIL CRKAIP REEGGKVIIIEI++GP +GPVM+EAQLLM
Sbjct: 513 SQVVMLKLVLHFWSDEDCVKILAQCRKAIPPREEGGKVIIIEIVVGPSLGPVMFEAQLLM 334
Query: 965 DMLMMVNTKGRQRGEDDWRHIFTKAGFSDYKVVKKIGARGVIEVYP* 1105
DMLMMVNT+G QR E+ W +F KAGF+DYK+VKK+GAR VIEVYP*
Sbjct: 333 DMLMMVNTRGGQRDENHWCELFKKAGFTDYKIVKKLGARSVIEVYP* 193
Score = 151 bits (325), Expect = 6e-036
Identities = 71/106 (66%), Positives = 80/106 (75%)
Frame = -2 / +2
Query: 1110 LAYG*TSMTPRAPIFLTTL*SEKPALVKMWRQSSSPRCLPLVLTIMSMSISSWASYMTGP 931
++YG*TSMT RAP F T L*S PA + Q S R PLV TIMS+SI SWAS +TGP
Sbjct: 188 ISYG*TSMTDRAPNFFTIL*SVNPAFLNSSHQ*FSSR*PPLVFTIMSISIRSWASNITGP 367
Query: 930 MYGPRSISMMITFPPSSREGMAFLHSSRILTQSSSLQKCRTSLSMT 793
GP +ISM+ITFPPSSR GMAFLH +RI TQSSSLQKC TSLS+T
Sbjct: 368 KEGPTTISMIITFPPSSRGGMAFLHWARIFTQSSSLQKCSTSLSIT 505
Score = 27.6 bits (54), Expect(2) = 6e-054
Identities = 9/13 (69%), Positives = 12/13 (92%)
Frame = +2 / -3
Query: 704 FPDIKCTVLNLPR 742
+P IKCTVL+LP+
Sbjct: 624 YPHIKCTVLDLPK 586
>gb|BF257368.2|BF257368 HVSMEf0012L06f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEf0012L06f, mRNA sequence
Length = 539
Score = 205 bits (443), Expect(2) = 6e-054
Identities = 87/135 (64%), Positives = 106/135 (78%)
Frame = +2 / +3
Query: 56 VPTDAELLQAQADLWRHSLYYLTSMALKCAVELHIPTAIHNLGGSATLPDLVAALSLPAA 235
VPTDAELLQAQ+DLWRHSL YLT M+L+CAV+L +PTAIH LGG+A+ +LVAALSLPA+
Sbjct: 81 VPTDAELLQAQSDLWRHSLCYLTPMSLRCAVDLGVPTAIHRLGGAASPSELVAALSLPAS 260
Query: 236 KLPFLGRVMRLLVTSGVFASSDDVQYRLNPLSWLLVEGVESEDHTYQKYFVLGTVSRHYV 415
KLPFL R++R L T+GVF S+D YRLNPLS+LLV+GV + Q V SR+YV
Sbjct: 261 KLPFLARLLRQLATAGVFTSTDAGTYRLNPLSYLLVDGVRIDGDASQTAIVRAAASRYYV 440
Query: 416 EAGMSLADWFKKEED 460
EA M LADWF+K+ D
Sbjct: 441 EAAMGLADWFRKDFD 485
Score = 130 bits (279), Expect = 1e-029
Identities = 64/129 (49%), Positives = 79/129 (61%)
Frame = -1 / -1
Query: 442 PVGQGHAGLHVVAGDGAQHEVLLVGVVLRLHALHQQPGQRVQPVLHVVGRREDARRDQQP 263
PVGQ H LHVVA H+ L GV + A+H++ +RV+ V VG EDARR +
Sbjct: 467 PVGQAHGRLHVVARGRGAHDGRLAGVAVDADAVHEEVRERVEAVRSGVGGGEDARRGELA 288
Query: 262 HHAPEERELGRWQGQRGHEVRQRGRPA*VVDGGRDVELHRALERHGCQVVEAVAPQVGLR 83
A EER+LGR QGQ G + + A VDG D E+ A ERHG +V EAVAPQVGLR
Sbjct: 287 QQAGEERQLGRGQGQGGDQFGRGRGAAEAVDGRGDAEVDGAAERHGREVAEAVAPQVGLR 108
Query: 82 LQQLGVRGN 56
L+QL V G+
Sbjct: 107 LEQLRVGGD 81
Score = 98.7 bits (209), Expect(2) = 1e-024
Identities = 50/87 (57%), Positives = 52/87 (59%)
Frame = -2 / -2
Query: 315 RYCTSSDDAKTPDVTSSRITRPRNGSLAAGRDSAATRSGSVADPPRLWMAVGMWSSTAHL 136
RY +S + KTP V S R R RNGSL AGRD AAT S A PPR WMAVG STA
Sbjct: 340 RYVPASVEVKTPAVASWRSRRARNGSLDAGRDRAATSSDGDAAPPRRWMAVGTPRSTAQR 161
Query: 135 SAMDVR**RLWRHRXXXXXXXXXSVGT 55
S M VR* RLWRHR SVGT
Sbjct: 160 SDMGVR*QRLWRHRSDCAWSSSASVGT 80
Score = 35.0 bits (70), Expect(2) = 1e-024
Identities = 18/39 (46%), Positives = 21/39 (53%)
Frame = -2 / -2
Query: 489 SNGDGSWRXXXXSFLNQSARDMPAST*WRETVPSTKYFW 373
++ +G SFLNQSAR M AST* RE T W
Sbjct: 514 TSSNGEGTAPSKSFLNQSARPMAAST**REAAARTMAVW 398
Score = 26.3 bits (51), Expect(2) = 6e-054
Identities = 9/19 (47%), Positives = 13/19 (68%)
Frame = +2 / +3
Query: 455 EDEDRQLPSPFEALHGVPL 511
+D D +PSPFE +HG +
Sbjct: 474 KDFDGAVPSPFEDVHGAAI 530
>gb|BJ468058.1|BJ468058 BJ468058 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags30o16 3', mRNA sequence
Length = 674
Score = 198 bits (426), Expect(2) = 8e-054
Identities = 79/105 (75%), Positives = 93/105 (88%)
Frame = +2 / -2
Query: 785 AQAVMLKLVLHFWSDDDCVKILELCRKAIPSREEGGKVIIIEILLGPYMGPVMYEAQLLM 964
AQAVMLKLVLH WSDDDCVKIL C+ AIPSREEGGKVI+I+I++ P +GPVM+EAQ LM
Sbjct: 547 AQAVMLKLVLHHWSDDDCVKILTQCKNAIPSREEGGKVIVIDIVVEPSLGPVMFEAQTLM 368
Query: 965 DMLMMVNTKGRQRGEDDWRHIFTKAGFSDYKVVKKIGARGVIEVY 1099
D+LM+V T+GRQR E DW +FTKAGFSDYK+VK++GARGVIEVY
Sbjct: 367 DILMLVFTRGRQRSESDWHVLFTKAGFSDYKIVKRLGARGVIEVY 233
Score = 135 bits (289), Expect(2) = 3e-033
Identities = 70/103 (67%), Positives = 74/103 (71%)
Frame = -2 / +3
Query: 1098 *TSMTPRAPIFLTTL*SEKPALVKMWRQSSSPRCLPLVLTIMSMSISSWASYMTGPMYGP 919
*TS+TPRAP LT L*S PALV QS S R PLV T MSMSI AS MTGP G
Sbjct: 234 *TSITPRAPSLLTIL*SLNPALVNNTCQSLSLR*RPLVKTSMSMSIRVCASNMTGPNDGS 413
Query: 918 RSISMMITFPPSSREGMAFLHSSRILTQSSSLQKCRTSLSMTA 790
++SM ITFPPSSREGMAFLH RI TQSSSLQ C TSLS+TA
Sbjct: 414 TTMSMTITFPPSSREGMAFLHWVRIFTQSSSLQWCNTSLSITA 542
Score = 33.6 bits (67), Expect(2) = 8e-054
Identities = 13/18 (72%), Positives = 15/18 (83%)
Frame = +2 / -2
Query: 689 AIVKAFPDIKCTVLNLPR 742
AI KA P IKCTVL+LP+
Sbjct: 673 AITKAHPHIKCTVLDLPK 620
Score = 27.6 bits (54), Expect(2) = 3e-033
Identities = 10/16 (62%), Positives = 13/16 (81%)
Frame = -1 / +2
Query: 736 KVEHGALDVWEGLDDG 689
+++HGALDV GL DG
Sbjct: 626 EIQHGALDVRVGLGDG 673
>gb|AV918157.1|AV918157 AV918157 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags20b03 3', mRNA sequence
Length = 676
Score = 200 bits (431), Expect(3) = 1e-053
Identities = 80/108 (74%), Positives = 96/108 (88%)
Frame = +2 / -1
Query: 785 AQAVMLKLVLHFWSDDDCVKILELCRKAIPSREEGGKVIIIEILLGPYMGPVMYEAQLLM 964
AQAVMLKLVLH WSDDDCVKIL C+ AIPSREEGGKVI+I+I++ P +GPVM+EAQ LM
Sbjct: 460 AQAVMLKLVLHHWSDDDCVKILTQCKNAIPSREEGGKVIVIDIVVEPSLGPVMFEAQTLM 281
Query: 965 DMLMMVNTKGRQRGEDDWRHIFTKAGFSDYKVVKKIGARGVIEVYP*A 1108
DMLM+V T+GRQR E+DWR +F KAGF+DYK++KK+GARGVIEVY *+
Sbjct: 280 DMLMLVFTRGRQRSENDWRDLFMKAGFTDYKIIKKMGARGVIEVYK*S 137
Score = 149 bits (320), Expect(2) = 2e-035
Identities = 74/105 (70%), Positives = 78/105 (74%)
Frame = -2 / +3
Query: 1104 YG*TSMTPRAPIFLTTL*SEKPALVKMWRQSSSPRCLPLVLTIMSMSISSWASYMTGPMY 925
Y *TSMTPRAPIFL L*S PA +K RQS S R PLV T MSMS+ WAS MTGP
Sbjct: 141 YL*TSMTPRAPIFLIIL*SVNPAFMKRSRQSFSLR*RPLVNTSMSMSMRVWASNMTGPND 320
Query: 924 GPRSISMMITFPPSSREGMAFLHSSRILTQSSSLQKCRTSLSMTA 790
G +ISM ITFPPSSREGMAFLH RI TQSSSLQ C TSLS+TA
Sbjct: 321 GSTTISMTITFPPSSREGMAFLHWVRIFTQSSSLQWCSTSLSITA 455
Score = 32.7 bits (65), Expect(3) = 1e-053
Identities = 12/22 (54%), Positives = 14/22 (63%)
Frame = +2 / -3
Query: 623 DVFSGLRSLTYCCGRQGNASAA 688
D+F GL SLT CCG G + A
Sbjct: 650 DLFKGLESLTDCCGGDGKTARA 585
Score = 24.0 bits (46), Expect(2) = 2e-035
Identities = 11/22 (50%), Positives = 12/22 (54%)
Frame = -2 / +1
Query: 687 AALAFPCLPQQ*VSERRPLKTS 622
A FP PQQ V + PLK S
Sbjct: 586 ALAVFPSPPQQSVRDSSPLKRS 651
Score = 21.7 bits (41), Expect(3) = 1e-053
Identities = 7/9 (77%), Positives = 9/9 (100%)
Frame = +2 / -1
Query: 716 KCTVLNLPR 742
KCTVL+LP+
Sbjct: 559 KCTVLDLPK 533
>gb|BF258596.2|BF258596 HVSMEf0016C17f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEf0016C17f, mRNA sequence
Length = 580
Score = 154 bits (330), Expect(3) = 1e-053
Identities = 63/80 (78%), Positives = 72/80 (90%)
Frame = +2 / +3
Query: 56 VPTDAELLQAQADLWRHSLYYLTSMALKCAVELHIPTAIHNLGGSATLPDLVAALSLPAA 235
VPTDAELLQAQADLWRH+LYYLTSM L+CAV+L IPTA+HNLGG +LPDL A LS+PA+
Sbjct: 75 VPTDAELLQAQADLWRHTLYYLTSMGLRCAVKLGIPTAMHNLGGVTSLPDLAAVLSIPAS 254
Query: 236 KLPFLGRVMRLLVTSGVFAS 295
K PFLGR+MR LVTSGVFA+
Sbjct: 255 KQPFLGRLMRALVTSGVFAA 314
Score = 108 bits (230), Expect(2) = 1e-027
Identities = 51/79 (64%), Positives = 55/79 (69%)
Frame = -2 / -1
Query: 291 AKTPDVTSSRITRPRNGSLAAGRDSAATRSGSVADPPRLWMAVGMWSSTAHLSAMDVR** 112
AKTP+VTS+RI RPRNG L AG DS A RSGS PPRL +AVGM S TA S MDVR**
Sbjct: 310 AKTPEVTSARIRRPRNGCLLAGMDSTAARSGSEVTPPRLCIAVGMPSLTAQRSPMDVR** 131
Query: 111 RLWRHRXXXXXXXXXSVGT 55
R+WRHR SVGT
Sbjct: 130 RVWRHRSA*ACSSSASVGT 74
Score = 69.3 bits (145), Expect(3) = 1e-053
Identities = 26/48 (54%), Positives = 37/48 (77%)
Frame = +2 / +3
Query: 311 YRLNPLSWLLVEGVESEDHTYQKYFVLGTVSRHYVEAGMSLADWFKKE 454
+RLNPLS +LV+GV++E+H Q FVL S HY+EA + +A+WFKK+
Sbjct: 345 FRLNPLSRVLVDGVDAEEHHSQTSFVLAGTSPHYMEAALGMAEWFKKD 488
Score = 35.4 bits (71), Expect(2) = 1e-027
Identities = 15/42 (35%), Positives = 21/42 (50%)
Frame = -1 / -3
Query: 442 PVGQGHAGLHVVAGDGAQHEVLLVGVVLRLHALHQQPGQRVQ 317
P+G G HVV +HE L V R+ +HQ G+ V+
Sbjct: 476 PLGHPQRGFHVVRRRPGEHEGRLAVVFFRIDTIHQDTGEWVE 351
Score = 26.3 bits (51), Expect(3) = 1e-053
Identities = 11/19 (57%), Positives = 12/19 (63%)
Frame = +3 / +1
Query: 495 CTGCPSSTRAPSCWTRSWT 551
C SSTRAP WT+S T
Sbjct: 523 CIARRSSTRAPRPWTQSST 579
>gb|BF617976.2|BF617976 HVSMEc0002N19f Hordeum vulgare seedling shoot EST library
HVcDNA0003 (Etiolated and unstressed) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEc0002N19f, mRNA sequence
Length = 543
Score = 201 bits (433), Expect(2) = 2e-053
Identities = 84/136 (61%), Positives = 105/136 (77%)
Frame = +2 / +1
Query: 47 TAIVPTDAELLQAQADLWRHSLYYLTSMALKCAVELHIPTAIHNLGGSATLPDLVAALSL 226
T VPTDA+L+QAQADLWRHSL +LT++AL+CAV+L IPTAIH LGG+ ++ DLV ALSL
Sbjct: 16 TMAVPTDAQLIQAQADLWRHSLCHLTAIALRCAVQLGIPTAIHRLGGTTSVSDLVTALSL 195
Query: 227 PAAKLPFLGRVMRLLVTSGVFASSDDVQYRLNPLSWLLVEGVESEDHTYQKYFVLGTVSR 406
P +K+P+LGRV+RLL SG AS + Y L PLS+LLV+GV + QK VL T SR
Sbjct: 196 PQSKMPYLGRVLRLLAASGALASPKEGTYSLVPLSYLLVDGVFIDGEASQKAIVLTTTSR 375
Query: 407 HYVEAGMSLADWFKKE 454
HY+EA + LADWFKK+
Sbjct: 376 HYIEAALGLADWFKKD 423
Score = 29.5 bits (58), Expect(2) = 2e-053
Identities = 13/36 (36%), Positives = 15/36 (41%)
Frame = +2 / +1
Query: 476 PSPFEALHGVPLVHESTKXXXXXXXXXXXXGVAAHD 583
PSPFE +HG L ES +A HD
Sbjct: 436 PSPFEDVHGATLFEESMALLDPKSDKMFHEALACHD 543
>gb|BF253855.2|BF253855 HVSMEf0002E24f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEf0002E24f, mRNA sequence
Length = 608
Score = 154 bits (330), Expect(3) = 4e-053
Identities = 63/80 (78%), Positives = 72/80 (90%)
Frame = +2 / +1
Query: 56 VPTDAELLQAQADLWRHSLYYLTSMALKCAVELHIPTAIHNLGGSATLPDLVAALSLPAA 235
VPTDAELLQAQADLWRH+LYYLTSM L+CAV+L IPTA+HNLGG +LPDL A LS+PA+
Sbjct: 82 VPTDAELLQAQADLWRHTLYYLTSMGLRCAVKLGIPTAMHNLGGVTSLPDLAAVLSIPAS 261
Query: 236 KLPFLGRVMRLLVTSGVFAS 295
K PFLGR+MR LVTSGVFA+
Sbjct: 262 KQPFLGRLMRALVTSGVFAA 321
Score = 108 bits (230), Expect(2) = 1e-027
Identities = 51/79 (64%), Positives = 55/79 (69%)
Frame = -2 / -1
Query: 291 AKTPDVTSSRITRPRNGSLAAGRDSAATRSGSVADPPRLWMAVGMWSSTAHLSAMDVR** 112
AKTP+VTS+RI RPRNG L AG DS A RSGS PPRL +AVGM S TA S MDVR**
Sbjct: 317 AKTPEVTSARIRRPRNGCLLAGMDSTAARSGSEVTPPRLCIAVGMPSLTAQRSPMDVR** 138
Query: 111 RLWRHRXXXXXXXXXSVGT 55
R+WRHR SVGT
Sbjct: 137 RVWRHRSA*ACSSSASVGT 81
Score = 69.8 bits (146), Expect(3) = 4e-053
Identities = 25/48 (52%), Positives = 37/48 (77%)
Frame = +2 / +1
Query: 311 YRLNPLSWLLVEGVESEDHTYQKYFVLGTVSRHYVEAGMSLADWFKKE 454
+RLNPLS +LV+GV++E+H Q +FVL S HY+E + +A+WFKK+
Sbjct: 352 FRLNPLSRVLVDGVDAEEHHSQTFFVLAGTSPHYMETALGMAEWFKKD 495
Score = 35.9 bits (72), Expect(2) = 1e-027
Identities = 15/42 (35%), Positives = 21/42 (50%)
Frame = -1 / -3
Query: 442 PVGQGHAGLHVVAGDGAQHEVLLVGVVLRLHALHQQPGQRVQ 317
P+G G HVV +HE L V R+ +HQ G+ V+
Sbjct: 483 PLGHPQRGFHVVRRRPGEHEERLAVVFFRIDTIHQDTGEWVE 358
Score = 24.0 bits (46), Expect(3) = 4e-053
Identities = 9/19 (47%), Positives = 11/19 (57%)
Frame = +3 / +2
Query: 495 CTGCPSSTRAPSCWTRSWT 551
C SSTRAP W ++ T
Sbjct: 530 CIARRSSTRAPGAWDQNST 586
>gb|BJ465166.1|BJ465166 BJ465166 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags38e18 5', mRNA sequence
Length = 580
Score = 148 bits (317), Expect(3) = 4e-053
Identities = 62/80 (77%), Positives = 71/80 (88%)
Frame = +2 / +3
Query: 56 VPTDAELLQAQADLWRHSLYYLTSMALKCAVELHIPTAIHNLGGSATLPDLVAALSLPAA 235
VP AELLQAQADLWRH+LYYLTSM L+CAV+L IPTAIHNLGG ++L DL AALS+PA+
Sbjct: 51 VPKGAELLQAQADLWRHTLYYLTSMGLRCAVKLGIPTAIHNLGGVSSLADLAAALSIPAS 230
Query: 236 KLPFLGRVMRLLVTSGVFAS 295
K PFLGR+MR LVTSGVFA+
Sbjct: 231 KQPFLGRLMRALVTSGVFAN 290
Score = 111 bits (236), Expect(2) = 7e-030
Identities = 50/79 (63%), Positives = 55/79 (69%)
Frame = -2 / -1
Query: 291 AKTPDVTSSRITRPRNGSLAAGRDSAATRSGSVADPPRLWMAVGMWSSTAHLSAMDVR** 112
AKTP+VTS+RI RPRNG L AG DSAA RS S PPRLW+AVGM S TA S MDVR**
Sbjct: 286 AKTPEVTSARIRRPRNGCLLAGMDSAAARSASEETPPRLWIAVGMPSLTAQRSPMDVR** 107
Query: 111 RLWRHRXXXXXXXXXSVGT 55
R+WRHR +GT
Sbjct: 106 RVWRHRSACACRSSAPLGT 50
Score = 93.6 bits (198), Expect(2) = 3e-021
Identities = 45/78 (57%), Positives = 52/78 (66%)
Frame = -1 / -3
Query: 289 EDARRDQQPHHAPEERELGRWQGQRGHEVRQRGRPA*VVDGGRDVELHRALERHGCQVVE 110
EDA DQ+ H A +ER L GQRG +V QRG PA VVD RD EL A E HG +VV+
Sbjct: 284 EDA*GDQRAHQAAKERLLACGDGQRGRQVSQRGDPAEVVDRRRDAELDGAAEPHGREVVK 105
Query: 109 AVAPQVGLRLQQLGVRGN 56
VAPQVGL LQ+LG G+
Sbjct: 104 GVAPQVGLCLQELGTLGD 51
Score = 68.4 bits (143), Expect(3) = 4e-053
Identities = 26/48 (54%), Positives = 36/48 (75%)
Frame = +2 / +3
Query: 311 YRLNPLSWLLVEGVESEDHTYQKYFVLGTVSRHYVEAGMSLADWFKKE 454
+ LNPLS +LV+GV +++H Q FVL SRHY+EA + +ADWFKK+
Sbjct: 321 FGLNPLSRILVDGVVADEHHSQTSFVLAGTSRHYMEAALGMADWFKKD 464
Score = 40.5 bits (82), Expect(2) = 7e-030
Identities = 19/42 (45%), Positives = 23/42 (54%)
Frame = -1 / -3
Query: 442 PVGQGHAGLHVVAGDGAQHEVLLVGVVLRLHALHQQPGQRVQ 317
PV HVV G +QHE L V++R A+HQ GQ VQ
Sbjct: 452 PVSHAQRSFHVVPGRPSQHEGRLAVVLVRDDAVHQDAGQWVQ 327
Score = 31.3 bits (62), Expect(3) = 4e-053
Identities = 14/27 (51%), Positives = 15/27 (55%)
Frame = +3 / +1
Query: 495 CTGCPSSTRAPSCWTRSWTGSWRKAWP 575
C PSSTRA WTRS T + WP
Sbjct: 499 CIVRPSSTRARRPWTRSSTHWSQMVWP 579
Score = 28.6 bits (56), Expect(2) = 3e-021
Identities = 14/26 (53%), Positives = 15/26 (57%)
Frame = -2 / -1
Query: 450 FLNQSARDMPAST*WRETVPSTKYFW 373
FLNQSA AS * R+ STK W
Sbjct: 460 FLNQSAMPSAASM*CRDVPASTKDVW 383
>gb|BI778623.2|BI778623 EBro07_SQ003_N10_R root, 3 week, reduced light, cv Optic, EBro07
Hordeum vulgare subsp. vulgare cDNA clone
EBro07_SQ003_N10 5', mRNA sequence
Length = 604
Score = 150 bits (323), Expect(3) = 2e-052
Identities = 61/78 (78%), Positives = 69/78 (88%)
Frame = +2 / +2
Query: 785 AQAVMLKLVLHFWSDDDCVKILELCRKAIPSREEGGKVIIIEILLGPYMGPVMYEAQLLM 964
+Q VMLKLVLHFWSD+DCVKIL CRKAIP REEGGKVIIIEI++GP + PVM+EAQLLM
Sbjct: 362 SQVVMLKLVLHFWSDEDCVKILAQCRKAIPPREEGGKVIIIEIVVGPSLXPVMFEAQLLM 541
Query: 965 DMLMMVNTKGRQRGEDDW 1018
DMLMMVNT+G QR E+ W
Sbjct: 542 DMLMMVNTRGGQRDENHW 595
Score = 114 bits (244), Expect(4) = 8e-031
Identities = 52/72 (72%), Positives = 58/72 (80%)
Frame = -2 / -2
Query: 1008 SPRCLPLVLTIMSMSISSWASYMTGPMYGPRSISMMITFPPSSREGMAFLHSSRILTQSS 829
S R PLV TIMS+SI SWAS +TG GP +ISM+ITFPPSSR GMAFLH +RI TQSS
Sbjct: 585 SSR*PPLVFTIMSISIRSWASNITGXKEGPTTISMIITFPPSSRGGMAFLHWARIFTQSS 406
Query: 828 SLQKCRTSLSMT 793
SLQKC TSLS+T
Sbjct: 405 SLQKCSTSLSIT 370
Score = 56.1 bits (116), Expect(3) = 2e-052
Identities = 24/56 (42%), Positives = 31/56 (55%)
Frame = +2 / +2
Query: 452 EEDEDRQLPSPFEALHGVPLVHESTKXXXXXXXXXXXXGVAAHDNLAIGTVIRECG 619
++D + + SPFE GVPL E T G+AAHDNL I T++RECG
Sbjct: 5 KKDTELPVLSPFEEKFGVPLFDEKTALLDQELDSVCNQGLAAHDNLGIATILRECG 172
Score = 38.6 bits (78), Expect(3) = 2e-052
Identities = 15/28 (53%), Positives = 20/28 (71%)
Frame = +2 / +2
Query: 659 CGRQGNASAAAIVKAFPDIKCTVLNLPR 742
C +A A+VKA+P IKCTVL+LP+
Sbjct: 206 CCGGDGTTARALVKAYPHIKCTVLDLPK 289
Score = 26.7 bits (52), Expect(4) = 8e-031
Identities = 11/18 (61%), Positives = 13/18 (72%)
Frame = -1 / -1
Query: 736 KVEHGALDVWEGLDDGGR 683
KV+H ALDV LD+G R
Sbjct: 283 KVQHSALDVRISLDEGPR 230
Score = 26.3 bits (51), Expect(4) = 8e-031
Identities = 11/19 (57%), Positives = 13/19 (68%)
Frame = -2 / -2
Query: 621 APHSRMTVPMARLSCAATP 565
+PHSR V + RLS AA P
Sbjct: 174 SPHSRSMVAIPRLSWAAKP 118
Score = 22.1 bits (42), Expect(4) = 8e-031
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = -2 / -2
Query: 687 AALAFPCLPQQ*VSERRPLKTS 622
A P PQQ V E PLK S
Sbjct: 237 ALAVVPSPPQQSVRESSPLKMS 172
Database: Hordeum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:16 PM
Number of letters in database: 175,134,539
Number of sequences in database: 312,970
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 569,049,300
Number of Sequences: 312970
Number of extensions: 10223258
Number of successful extensions: 147936
Number of sequences better than 1.0e-020: 296
length of database: 58,378,179
effective HSP length: 53
effective length of database: 41,790,769
effective search space used: 16214818372
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)