TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2441599.2.1
(755 letters)
Database: Hordeum_nucl_with_EST.fasta
312,970 sequences; 175,134,539 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|AV916291.1|AV916291 AV916291 K. Sato unpublished cDNA li... 274 4e-073
gb|BQ659548.1|BQ659548 HE01M16u HE Hordeum vulgare subsp. v... 272 2e-072
gb|BG344088.2|BG344088 HVSMEg0007J23f Hordeum vulgare pre-a... 271 2e-072
gb|BE455966.3|BE455966 HVSMEg0019B01f Hordeum vulgare pre-a... 271 2e-072
gb|AV916977.1|AV916977 AV916977 K. Sato unpublished cDNA li... 271 2e-072
gb|AV923559.1|AV923559 AV923559 K. Sato unpublished cDNA li... 271 2e-072
gb|BQ460900.1|BQ460900 HE01M16r HE Hordeum vulgare subsp. v... 271 2e-072
gb|BQ466625.1|BQ466625 HS01B09T HS Hordeum vulgare subsp. v... 271 2e-072
gb|BQ469765.1|BQ469765 HZ01M24r HZ Hordeum vulgare subsp. v... 271 2e-072
gb|BM368188.2|BM368188 EBed01_SQ002_G17_R endosperm, 6 DPA,... 271 2e-072
gb|BM377927.2|BM377927 EBem04_SQ004_J22_R embryo, 12 DPA, n... 271 2e-072
gb|BQ763856.1|BQ763856 EBro03_SQ005_H17_R root, 3 week, wat... 271 2e-072
gb|BU976730.1|BU976730 HA10D07r HA Hordeum vulgare subsp. v... 271 2e-072
gb|BU977881.1|BU977881 HA12D08r HA Hordeum vulgare subsp. v... 271 2e-072
gb|BU978542.1|BU978542 HA13I17r HA Hordeum vulgare subsp. v... 271 2e-072
gb|BU983417.1|BU983417 HA29K18r HA Hordeum vulgare subsp. v... 271 2e-072
gb|BU984022.1|BU984022 HA31M02r HA Hordeum vulgare subsp. v... 271 2e-072
gb|BU997399.1|BU997399 HI07N23r HI Hordeum vulgare subsp. v... 271 2e-072
gb|BU998875.1|BU998875 HI12G19r HI Hordeum vulgare subsp. v... 271 2e-072
gb|BU999832.1|BU999832 HI15P15r HI Hordeum vulgare subsp. v... 271 2e-072
gb|CA013173.1|CA013173 HT07J22r HT Hordeum vulgare subsp. v... 271 2e-072
gb|CA013628.1|CA013628 HT09A18r HT Hordeum vulgare subsp. v... 271 2e-072
gb|CA021210.1|CA021210 HZ39H02r HZ Hordeum vulgare subsp. v... 271 2e-072
gb|CA025039.1|CA025039 HZ51A19r HZ Hordeum vulgare subsp. v... 271 2e-072
gb|CA025246.1|CA025246 HZ51J13r HZ Hordeum vulgare subsp. v... 271 2e-072
gb|CA029397.1|CA029397 HZ65B13r HZ Hordeum vulgare subsp. v... 271 2e-072
gb|BJ549122.1|BJ549122 BJ549122 K. Sato unpublished cDNA li... 271 2e-072
gb|CB860038.1|CB860038 HI12G19w HI Hordeum vulgare subsp. v... 271 2e-072
gb|CV056266.1|CV056266 BNEL15G6 Barley EST endosperm librar... 271 2e-072
gb|CV056531.1|CV056531 BNEL18H1 Barley EST endosperm librar... 271 2e-072
gb|CV057063.1|CV057063 BNEL23f12 Barley EST endosperm libra... 271 2e-072
gb|CV058783.1|CV058783 BNEL40h1 Barley EST endosperm librar... 271 2e-072
gb|CV058787.1|CV058787 BNEL40h2 Barley EST endosperm librar... 271 2e-072
gb|CV060449.1|CV060449 BNEL58c2 Barley EST endosperm librar... 271 2e-072
gb|CV061757.1|CV061757 BNEL71f1 Barley EST endosperm librar... 271 2e-072
gb|CK122329.1|CK122329 BES1824102o02 BES1824 Hordeum vulgar... 271 2e-072
gb|CK123815.1|CK123815 BES1824105g24 BES1824 Hordeum vulgar... 271 2e-072
gb|BM371480.2|BM371480 EBma08_SQ002_O06_R maternal, 28 DPA,... 270 5e-072
gb|BF260888.3|BF260888 HVSMEf0023D08f Hordeum vulgare seedl... 269 2e-071
gb|BM097606.2|BM097606 EBem04_SQ002_C24_R embryo, 12 DPA, n... 269 2e-071
gb|AV931655.1|AV931655 AV931655 K. Sato unpublished cDNA li... 264 4e-070
gb|BI779400.2|BI779400 EBro01_SQ003_O11_R root, 3 week, hyd... 262 2e-069
gb|BM440853.2|BM440853 EBca01_SQ001_G18_R carpel, pre-anthe... 260 5e-069
gb|CA023173.1|CA023173 HZ45H05r HZ Hordeum vulgare subsp. v... 258 3e-068
gb|CA024625.1|CA024625 HZ49N10r HZ Hordeum vulgare subsp. v... 258 3e-068
gb|BE193362.2|BE193362 HVSMEh0080L17f Hordeum vulgare 5-45 ... 254 1e-067
gb|AV921719.1|AV921719 AV921719 K. Sato unpublished cDNA li... 256 1e-067
gb|CK123436.1|CK123436 BES1824104a20 BES1824 Hordeum vulgar... 248 2e-067
gb|BM101388.2|BM101388 EBpi01_SQ003_L07_R pistil, 1 DPA, no... 225 4e-066
gb|BU978165.1|BU978165 HA12L01r HA Hordeum vulgare subsp. v... 248 2e-065
gb|CA027739.1|CA027739 HZ59O02r HZ Hordeum vulgare subsp. v... 248 2e-065
gb|CV063968.1|CV063968 BNEL95g10 Barley EST endosperm libra... 248 3e-065
gb|BF259294.3|BF259294 HVSMEf0018M24f Hordeum vulgare seedl... 240 1e-063
gb|BU979983.1|BU979983 HA18C03r HA Hordeum vulgare subsp. v... 242 2e-063
gb|CA002011.1|CA002011 HS06E03r HS Hordeum vulgare subsp. v... 242 2e-063
gb|CA028012.1|CA028012 HZ60L17r HZ Hordeum vulgare subsp. v... 242 2e-063
gb|CA025687.1|CA025687 HZ52N19r HZ Hordeum vulgare subsp. v... 222 1e-057
gb|AV918231.1|AV918231 AV918231 K. Sato unpublished cDNA li... 204 2e-057
gb|CV054163.1|CV054163 BNEL107e1 Barley EST endosperm libra... 205 4e-057
gb|BQ764523.1|BQ764523 EBca01_SQ004_J03_R carpel, pre-anthe... 205 4e-057
gb|BQ459836.1|BQ459836 HA07P07r HA Hordeum vulgare subsp. v... 205 4e-057
gb|BM375264.2|BM375264 EBem06_SQ002_N07_R embryo, 21 DPA, n... 205 4e-057
gb|BM374879.1|BM374879 EBma05_SQ003_F16_R maternal, 12 DPA,... 205 4e-057
gb|CV058390.1|CV058390 BNEL37e5 Barley EST endosperm librar... 205 4e-057
gb|BU981519.1|BU981519 HA23N24r HA Hordeum vulgare subsp. v... 205 4e-057
gb|CA028650.1|CA028650 HZ62M12r HZ Hordeum vulgare subsp. v... 205 4e-057
gb|BI949421.1|BI949421 HVSMEl0013M24f Hordeum vulgare spike... 205 4e-057
gb|BU997105.1|BU997105 HI06O20r HI Hordeum vulgare subsp. v... 205 4e-057
gb|CV058513.1|CV058513 BNEL38h1 Barley EST endosperm librar... 203 3e-056
gb|CA019079.1|CA019079 HV10K24r HV Hordeum vulgare subsp. v... 205 3e-055
gb|CA026289.1|CA026289 HZ55H16r HZ Hordeum vulgare subsp. v... 205 3e-055
gb|BJ448314.1|BJ448314 BJ448314 K. Sato unpublished cDNA li... 198 6e-055
gb|BM100140.2|BM100140 EBma01_SQ001_F01_R maternal, 4 DPA, ... 212 2e-054
gb|CV057323.1|CV057323 BNEL26e3 Barley EST endosperm librar... 210 1e-053
gb|BQ460597.1|BQ460597 HA06H20r HA Hordeum vulgare subsp. v... 205 2e-052
gb|CV064027.1|CV064027 BNEL96e7 Barley EST endosperm librar... 192 2e-051
gb|BM444459.1|BM444459 EBem09_SQ005_E24_R embryo, 1 Day ger... 195 2e-049
gb|BJ456033.1|BJ456033 BJ456033 K. Sato unpublished cDNA li... 162 9e-049
gb|BM371270.2|BM371270 EBma08_SQ002_B09_R maternal, 28 DPA,... 192 2e-048
gb|BU969591.1|BU969591 HB11P12r BC Hordeum vulgare subsp. v... 186 1e-046
gb|CB858662.1|CB858662 HI07N23w HI Hordeum vulgare subsp. v... 184 4e-046
gb|BI776491.2|BI776491 EBpi05_SQ001_J07_R pistil, 8 DPA, no... 184 5e-046
gb|BQ665994.1|BQ665994 HZ01M24u HZ Hordeum vulgare subsp. v... 176 2e-043
gb|BU976731.1|BU976731 HA10D07u HA Hordeum vulgare subsp. v... 167 7e-041
gb|AV928006.1|AV928006 AV928006 K. Sato unpublished cDNA li... 162 2e-039
gb|BJ550017.1|BJ550017 BJ550017 K. Sato unpublished cDNA li... 162 2e-039
gb|BQ757874.1|BQ757874 EBem10_SQ005_H23_R embryo, 2 Day ger... 159 2e-038
gb|CK124996.1|CK124996 BES1824111A2g09 BES1824 Hordeum vulg... 155 4e-037
gb|BQ757103.1|BQ757103 EBem10_SQ002_N07_R embryo, 2 Day ger... 147 8e-035
gb|BM098020.2|BM098020 EBpi03_SQ002_F05_R pistil, 4 DPA, no... 99 1e-034
gb|BU980637.1|BU980637 HA21D21r HA Hordeum vulgare subsp. v... 146 2e-034
gb|AJ433556.1|AJ433556 AJ433556 S00002 Hordeum vulgare subs... 142 2e-033
gb|BU979618.1|BU979618 HA16L17r HA Hordeum vulgare subsp. v... 122 4e-032
gb|BI780839.1|BI780839 EBma05_SQ001_B24_R maternal, 12 DPA,... 133 8e-031
gb|BI777987.2|BI777987 EBro07_SQ001_L02_R root, 3 week, red... 99 6e-030
gb|CA010975.1|CA010975 HT07J22u HT Hordeum vulgare subsp. v... 79 4e-029
gb|BU978936.1|BU978936 HA14L04r HA Hordeum vulgare subsp. v... 109 3e-028
gb|BM370590.2|BM370590 EBro08_SQ004_K21_R root, 3 week, dro... 106 2e-027
gb|BQ466949.1|BQ466949 HS02B09r HS Hordeum vulgare subsp. v... 118 3e-026
gb|BQ657538.1|BQ657538 HA07P07u HA Hordeum vulgare subsp. v... 100 2e-025
gb|BQ657907.1|BQ657907 HA06H20u HA Hordeum vulgare subsp. v... 100 2e-025
gb|AL501438.1|AL501438 AL501438 Hordeum vulgare Barke roots... 99 3e-025
gb|CV056147.1|CV056147 BNEL14E12 Barley EST endosperm libra... 97 1e-024
gb|CA032476.1|CA032476 HX13C16r HX Hordeum vulgare subsp. v... 91 8e-023
>gb|AV916291.1|AV916291 AV916291 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags12h19 5', mRNA sequence
Length = 561
Score = 274 bits (593), Expect = 4e-073
Identities = 113/159 (71%), Positives = 132/159 (83%)
Frame = -2 / +3
Query: 667 ETLGACLTGGGEVMAMDPDAVAKAFVEHYYRTFDTNRAALVGLYQETSMLTFEGQKFQGP 488
+TL G AMDPD+V+KAFV+HYY+TFD+NRAALVGLYQ+ SMLTFEG+KF GP
Sbjct: 3 QTLXEARRGAQXXEAMDPDSVSKAFVQHYYQTFDSNRAALVGLYQDGSMLTFEGEKFGGP 182
Query: 487 SAIAGKLGSLPFQACEHQIVTVDCQPSGPQGGMLVFVSGSIRTGPEEHPIKFSQAFHLLP 308
+AIAGKLGSLPFQ C+H+I TVDCQPSGPQGG+LVFVSG+I TGP EHP+KFSQ FHLLP
Sbjct: 183 AAIAGKLGSLPFQQCQHKIDTVDCQPSGPQGGVLVFVSGTITTGPGEHPLKFSQMFHLLP 362
Query: 307 AAGSFFVQNDMFRLNYG*RQPILL**RNCLRVSC*NDEY 191
A GSF+VQNDMFRLNYG* + L +N +R C*N+EY
Sbjct: 363 AGGSFYVQNDMFRLNYG*GRAATLAAKNLIRDLC*NNEY 479
Score = 239 bits (517), Expect = 1e-062
Identities = 105/147 (71%), Positives = 112/147 (76%)
Frame = +3 / -3
Query: 186 IKYSSFQHETLKQFLHHKSIGCL*P*FRRNMSFCTKKDPAAGSKWNAWENLMGCSSGPVR 365
I+YS FQH++L +F + *P*FRRNMSFCT K P AGSKWN ENL GCS GPV
Sbjct: 484 IRYSLFQHKSLIKFFAARVAALP*P*FRRNMSFCT*KLPPAGSKWNICENLRGCSPGPVV 305
Query: 366 MEPETKTSMPPWGPDGWQSTVTI*CSQAWKGRDPSLPAMADGPWNFWPSKVSMEVSWYSP 545
M PETKT PPWGP+GWQSTV+I C WKGRDPSLPAMA GP NF PSKVSME SWYSP
Sbjct: 304 MVPETKTRTPPWGPEGWQSTVSILCWHCWKGRDPSLPAMAAGPPNFSPSKVSMEPSWYSP 125
Query: 546 TSAARLVSNVR**CSTKAFATASGSIA 626
TSAARL SNV **C T AF T SGSIA
Sbjct: 124 TSAARLESNVW**C*TNAFDTESGSIA 44
Score = 204 bits (441), Expect = 3e-052
Identities = 93/139 (66%), Positives = 103/139 (74%)
Frame = -1 / +2
Query: 602 EGLRGALLPNVRHQPRGAGWAVPGDLHAHLRGPEVPGPVRHCRQARISPFPGLRASDRHR 423
EG+R ALLP+VR QPR AG AVPG LHAHLRG EV P RH QARISP P + A DR+R
Sbjct: 68 EGVRSALLPDVRLQPRRAGGAVPGRLHAHLRGREVRRPRRHRWQARISPLPAVPAQDRYR 247
Query: 422 RLPAIGSPGRHARLRLRFHTHRPRGAPHQVLPGIPFAAGRWVLLRAE*HVPPELWLKTAD 243
RLPA+G+PGR RLRLR H HRPR AP QVL +PFAA LLRAE*HVPPELWL+
Sbjct: 248 RLPALGAPGRRPRLRLRHHHHRPRRAPPQVLTDVPFAASWRELLRAE*HVPPELWLRKGG 427
Query: 242 TLVMKELFKGFMLKR*ILN 186
KEL +GFMLK+*I N
Sbjct: 428 HSGSKELDQGFMLKQ*ISN 484
Score = 122 bits (262), Expect(2) = 3e-033
Identities = 62/94 (65%), Positives = 67/94 (71%)
Frame = +2 / -2
Query: 185 H*VFIVST*NP*TIPSSQEYRLSLAIVQAEHVILHEEGPSGRQQMECLGELDGVLLGAGA 364
H +FIVST* P + Q R SL IVQAEHVILH E PS QQME L EL+GVL GAG
Sbjct: 485 HSIFIVST*IPDQVLCCQSGRPSLTIVQAEHVILHVEAPSSWQQMEHL*ELEGVLAGAGG 306
Query: 365 YGTGDEDEHASLGTRWLAVDGDDLMLAGLERERS 466
G GDEDE A+LG R LAVDG DL+LA LE ERS
Sbjct: 305 DGAGDEDEDAALGPRGLAVDGIDLVLALLEGERS 204
Score = 90.4 bits (191), Expect(2) = 1e-030
Identities = 37/64 (57%), Positives = 41/64 (64%)
Frame = +1 / -1
Query: 397 PGDPMAGXXXXXXXXXXPGKGEIRACRQWRTGPGTSGPRR*AWRSPGTAQPAPRGWCRTF 576
PG P AG G+GEIRAC++WR G TS PRR*AW PGTA PA RGW RT
Sbjct: 273 PGAPRAGSRRYRSCAGTAGRGEIRACQRWRRGRRTSRPRR*AWSRPGTAPPARRGWSRTS 94
Query: 577 GSNA 588
GS+A
Sbjct: 93 GSSA 82
Score = 62.9 bits (131), Expect(2) = 1e-030
Identities = 28/57 (49%), Positives = 37/57 (64%)
Frame = +1 / -1
Query: 178 AATLSIHRFNMKPLNNSFITRVSAVFSHSSGGTCHSARRRTQRPAANGMPGRT*WGA 348
A++ IH FN+ P ++S + +HSSGGTCHSARR + + AANG RT* GA
Sbjct: 492 ASSFDIHCFNINP*SSSLLPEWPPFLNHSSGGTCHSARRSSLQLAANGTSVRT*GGA 322
Score = 39.1 bits (79), Expect(2) = 3e-033
Identities = 17/24 (70%), Positives = 21/24 (87%)
Frame = +2 / -2
Query: 536 VQPNQRRAVGVERSVVMLHEGLRY 607
VQP+QR AVGVER VV+L+E LR+
Sbjct: 134 VQPHQRGAVGVERLVVVLNERLRH 63
>gb|BQ659548.1|BQ659548 HE01M16u HE Hordeum vulgare subsp. vulgare cDNA clone HE01M16
3-PRIME, mRNA sequence
Length = 576
Score = 272 bits (588), Expect = 2e-072
Identities = 111/148 (75%), Positives = 129/148 (87%)
Frame = -2 / -2
Query: 634 EVMAMDPDAVAKAFVEHYYRTFDTNRAALVGLYQETSMLTFEGQKFQGPSAIAGKLGSLP 455
E AMDPD+V+KAFV+HYY+TFD+NRAALVGLYQ+ SMLTFEG+KF GP+AIAGKLGSLP
Sbjct: 539 EGKAMDPDSVSKAFVQHYYQTFDSNRAALVGLYQDGSMLTFEGEKFGGPAAIAGKLGSLP 360
Query: 454 FQACEHQIVTVDCQPSGPQGGMLVFVSGSIRTGPEEHPIKFSQAFHLLPAAGSFFVQNDM 275
FQ C+H+I TVDCQPSGPQGG+LVFVSG+I TGP EHP+KFSQ FHLLPA GSF+VQNDM
Sbjct: 359 FQQCQHKIDTVDCQPSGPQGGVLVFVSGTITTGPGEHPLKFSQMFHLLPAGGSFYVQNDM 180
Query: 274 FRLNYG*RQPILL**RNCLRVSC*NDEY 191
FRLNYG* + L +N +R C*N+EY
Sbjct: 179 FRLNYG*GRAATLAAKNLIRDLC*NNEY 96
Score = 238 bits (515), Expect = 2e-062
Identities = 105/150 (70%), Positives = 112/150 (74%)
Frame = +3 / +1
Query: 186 IKYSSFQHETLKQFLHHKSIGCL*P*FRRNMSFCTKKDPAAGSKWNAWENLMGCSSGPVR 365
I+YS FQH++L +F + *P*FRRNMSFCT K P AGSKWN ENL GCS GPV
Sbjct: 91 IRYSLFQHKSLIKFFAARVAALP*P*FRRNMSFCT*KLPPAGSKWNICENLRGCSPGPVV 270
Query: 366 MEPETKTSMPPWGPDGWQSTVTI*CSQAWKGRDPSLPAMADGPWNFWPSKVSMEVSWYSP 545
M PET T PPWGP+GWQSTV+I C WKGRDPSLPAMA GP NF PSKVSME SWYSP
Sbjct: 271 MVPETNTRTPPWGPEGWQSTVSILCWHCWKGRDPSLPAMAAGPPNFSPSKVSMEPSWYSP 450
Query: 546 TSAARLVSNVR**CSTKAFATASGSIAITS 635
TSAARL SNV **C T AF T SGSIA S
Sbjct: 451 TSAARLESNVW**C*TNAFDTESGSIAFPS 540
Score = 204 bits (439), Expect = 6e-052
Identities = 92/139 (66%), Positives = 103/139 (74%)
Frame = -1 / -1
Query: 602 EGLRGALLPNVRHQPRGAGWAVPGDLHAHLRGPEVPGPVRHCRQARISPFPGLRASDRHR 423
EG+R ALLP+VR QPR AG AVPG LHAHLRG EV P RH QARISP P + A DR+R
Sbjct: 507 EGVRSALLPDVRLQPRRAGGAVPGRLHAHLRGREVRRPRRHRWQARISPLPAVPAQDRYR 328
Query: 422 RLPAIGSPGRHARLRLRFHTHRPRGAPHQVLPGIPFAAGRWVLLRAE*HVPPELWLKTAD 243
RLPA+G+PGR R+RLR H HRPR AP QVL +PFAA LLRAE*HVPPELWL+
Sbjct: 327 RLPALGAPGRRPRIRLRHHHHRPRRAPPQVLTDVPFAASWRELLRAE*HVPPELWLRKGG 148
Query: 242 TLVMKELFKGFMLKR*ILN 186
KEL +GFMLK+*I N
Sbjct: 147 HSGSKELDQGFMLKQ*ISN 91
Score = 118 bits (253), Expect(2) = 4e-032
Identities = 61/94 (64%), Positives = 66/94 (70%)
Frame = +2 / +3
Query: 185 H*VFIVST*NP*TIPSSQEYRLSLAIVQAEHVILHEEGPSGRQQMECLGELDGVLLGAGA 364
H +FIVST* P + Q R SL IVQAEHVILH E PS QQME L EL+GVL GAG
Sbjct: 90 HSIFIVST*IPDQVLCCQSGRPSLTIVQAEHVILHVEAPSSWQQMEHL*ELEGVLAGAGG 269
Query: 365 YGTGDEDEHASLGTRWLAVDGDDLMLAGLERERS 466
G GDE E A+LG R LAVDG DL+LA LE ERS
Sbjct: 270 DGAGDEYEDAALGPRGLAVDGIDLVLALLEGERS 371
Score = 90.4 bits (191), Expect(2) = 1e-030
Identities = 37/64 (57%), Positives = 41/64 (64%)
Frame = +1 / +2
Query: 397 PGDPMAGXXXXXXXXXXPGKGEIRACRQWRTGPGTSGPRR*AWRSPGTAQPAPRGWCRTF 576
PG P AG G+GEIRAC++WR G TS PRR*AW PGTA PA RGW RT
Sbjct: 302 PGAPRAGSRRYRSCAGTAGRGEIRACQRWRRGRRTSRPRR*AWSRPGTAPPARRGWSRTS 481
Query: 577 GSNA 588
GS+A
Sbjct: 482 GSSA 493
Score = 62.9 bits (131), Expect(2) = 1e-030
Identities = 28/57 (49%), Positives = 37/57 (64%)
Frame = +1 / +2
Query: 178 AATLSIHRFNMKPLNNSFITRVSAVFSHSSGGTCHSARRRTQRPAANGMPGRT*WGA 348
A++ IH FN+ P ++S + +HSSGGTCHSARR + + AANG RT* GA
Sbjct: 83 ASSFDIHCFNINP*SSSLLPEWPPFLNHSSGGTCHSARRSSLQLAANGTSVRT*GGA 253
Score = 39.1 bits (79), Expect(2) = 4e-032
Identities = 17/24 (70%), Positives = 21/24 (87%)
Frame = +2 / +3
Query: 536 VQPNQRRAVGVERSVVMLHEGLRY 607
VQP+QR AVGVER VV+L+E LR+
Sbjct: 441 VQPHQRGAVGVERLVVVLNERLRH 512
>gb|BG344088.2|BG344088 HVSMEg0007J23f Hordeum vulgare pre-anthesis spike EST library
HVcDNA0008 (white to yellow anther) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEg0007J23f, mRNA sequence
Length = 754
Score = 271 bits (587), Expect = 2e-072
Identities = 110/145 (75%), Positives = 128/145 (88%)
Frame = -2 / +3
Query: 625 AMDPDAVAKAFVEHYYRTFDTNRAALVGLYQETSMLTFEGQKFQGPSAIAGKLGSLPFQA 446
AMDPD+V+KAFV+HYY+TFD+NRAALVGLYQ+ SMLTFEG+KF GP+AIAGKLGSLPFQ
Sbjct: 93 AMDPDSVSKAFVQHYYQTFDSNRAALVGLYQDGSMLTFEGEKFGGPAAIAGKLGSLPFQQ 272
Query: 445 CEHQIVTVDCQPSGPQGGMLVFVSGSIRTGPEEHPIKFSQAFHLLPAAGSFFVQNDMFRL 266
C+H+I TVDCQPSGPQGG+LVFVSG+I TGP EHP+KFSQ FHLLPA GSF+VQNDMFRL
Sbjct: 273 CQHKIDTVDCQPSGPQGGVLVFVSGTITTGPGEHPLKFSQMFHLLPAGGSFYVQNDMFRL 452
Query: 265 NYG*RQPILL**RNCLRVSC*NDEY 191
NYG* + L +N +R C*N+EY
Sbjct: 453 NYG*GRAATLAAKNLIRDLC*NNEY 527
Score = 240 bits (518), Expect = 8e-063
Identities = 106/150 (70%), Positives = 113/150 (75%)
Frame = +3 / -1
Query: 186 IKYSSFQHETLKQFLHHKSIGCL*P*FRRNMSFCTKKDPAAGSKWNAWENLMGCSSGPVR 365
I+YS FQH++L +F + *P*FRRNMSFCT K P AGSKWN ENL GCS GPV
Sbjct: 532 IRYSLFQHKSLIKFFAARVAALP*P*FRRNMSFCT*KLPPAGSKWNICENLRGCSPGPVV 353
Query: 366 MEPETKTSMPPWGPDGWQSTVTI*CSQAWKGRDPSLPAMADGPWNFWPSKVSMEVSWYSP 545
M PETKT PPWGP+GWQSTV+I C WKGRDPSLPAMA GP NF PSKVSME SWYSP
Sbjct: 352 MVPETKTRTPPWGPEGWQSTVSILCWHCWKGRDPSLPAMAAGPPNFSPSKVSMEPSWYSP 173
Query: 546 TSAARLVSNVR**CSTKAFATASGSIAITS 635
TSAARL SNV **C T AF T SGSIA S
Sbjct: 172 TSAARLESNVW**C*TNAFDTESGSIASPS 83
Score = 204 bits (441), Expect = 3e-052
Identities = 93/139 (66%), Positives = 103/139 (74%)
Frame = -1 / +2
Query: 602 EGLRGALLPNVRHQPRGAGWAVPGDLHAHLRGPEVPGPVRHCRQARISPFPGLRASDRHR 423
EG+R ALLP+VR QPR AG AVPG LHAHLRG EV P RH QARISP P + A DR+R
Sbjct: 116 EGVRSALLPDVRLQPRRAGGAVPGRLHAHLRGREVRRPRRHRWQARISPLPAVPAQDRYR 295
Query: 422 RLPAIGSPGRHARLRLRFHTHRPRGAPHQVLPGIPFAAGRWVLLRAE*HVPPELWLKTAD 243
RLPA+G+PGR RLRLR H HRPR AP QVL +PFAA LLRAE*HVPPELWL+
Sbjct: 296 RLPALGAPGRRPRLRLRHHHHRPRRAPPQVLTDVPFAASWRELLRAE*HVPPELWLRKGG 475
Query: 242 TLVMKELFKGFMLKR*ILN 186
KEL +GFMLK+*I N
Sbjct: 476 HSGSKELDQGFMLKQ*ISN 532
Score = 122 bits (262), Expect(2) = 3e-033
Identities = 62/94 (65%), Positives = 67/94 (71%)
Frame = +2 / -3
Query: 185 H*VFIVST*NP*TIPSSQEYRLSLAIVQAEHVILHEEGPSGRQQMECLGELDGVLLGAGA 364
H +FIVST* P + Q R SL IVQAEHVILH E PS QQME L EL+GVL GAG
Sbjct: 533 HSIFIVST*IPDQVLCCQSGRPSLTIVQAEHVILHVEAPSSWQQMEHL*ELEGVLAGAGG 354
Query: 365 YGTGDEDEHASLGTRWLAVDGDDLMLAGLERERS 466
G GDEDE A+LG R LAVDG DL+LA LE ERS
Sbjct: 353 DGAGDEDEDAALGPRGLAVDGIDLVLALLEGERS 252
Score = 90.4 bits (191), Expect(2) = 1e-030
Identities = 37/64 (57%), Positives = 41/64 (64%)
Frame = +1 / -2
Query: 397 PGDPMAGXXXXXXXXXXPGKGEIRACRQWRTGPGTSGPRR*AWRSPGTAQPAPRGWCRTF 576
PG P AG G+GEIRAC++WR G TS PRR*AW PGTA PA RGW RT
Sbjct: 321 PGAPRAGSRRYRSCAGTAGRGEIRACQRWRRGRRTSRPRR*AWSRPGTAPPARRGWSRTS 142
Query: 577 GSNA 588
GS+A
Sbjct: 141 GSSA 130
Score = 62.9 bits (131), Expect(2) = 1e-030
Identities = 28/57 (49%), Positives = 37/57 (64%)
Frame = +1 / -2
Query: 178 AATLSIHRFNMKPLNNSFITRVSAVFSHSSGGTCHSARRRTQRPAANGMPGRT*WGA 348
A++ IH FN+ P ++S + +HSSGGTCHSARR + + AANG RT* GA
Sbjct: 540 ASSFDIHCFNINP*SSSLLPEWPPFLNHSSGGTCHSARRSSLQLAANGTSVRT*GGA 370
Score = 39.1 bits (79), Expect(2) = 3e-033
Identities = 17/24 (70%), Positives = 21/24 (87%)
Frame = +2 / -3
Query: 536 VQPNQRRAVGVERSVVMLHEGLRY 607
VQP+QR AVGVER VV+L+E LR+
Sbjct: 182 VQPHQRGAVGVERLVVVLNERLRH 111
>gb|BE455966.3|BE455966 HVSMEg0019B01f Hordeum vulgare pre-anthesis spike EST library
HVcDNA0008 (white to yellow anther) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEg0019B01f, mRNA sequence
Length = 595
Score = 271 bits (587), Expect = 2e-072
Identities = 110/145 (75%), Positives = 128/145 (88%)
Frame = -2 / +3
Query: 625 AMDPDAVAKAFVEHYYRTFDTNRAALVGLYQETSMLTFEGQKFQGPSAIAGKLGSLPFQA 446
AMDPD+V+KAFV+HYY+TFD+NRAALVGLYQ+ SMLTFEG+KF GP+AIAGKLGSLPFQ
Sbjct: 36 AMDPDSVSKAFVQHYYQTFDSNRAALVGLYQDGSMLTFEGEKFGGPAAIAGKLGSLPFQQ 215
Query: 445 CEHQIVTVDCQPSGPQGGMLVFVSGSIRTGPEEHPIKFSQAFHLLPAAGSFFVQNDMFRL 266
C+H+I TVDCQPSGPQGG+LVFVSG+I TGP EHP+KFSQ FHLLPA GSF+VQNDMFRL
Sbjct: 216 CQHKIDTVDCQPSGPQGGVLVFVSGTITTGPGEHPLKFSQMFHLLPAGGSFYVQNDMFRL 395
Query: 265 NYG*RQPILL**RNCLRVSC*NDEY 191
NYG* + L +N +R C*N+EY
Sbjct: 396 NYG*GRAATLAAKNLIRDLC*NNEY 470
Score = 240 bits (518), Expect = 8e-063
Identities = 106/150 (70%), Positives = 113/150 (75%)
Frame = +3 / -1
Query: 186 IKYSSFQHETLKQFLHHKSIGCL*P*FRRNMSFCTKKDPAAGSKWNAWENLMGCSSGPVR 365
I+YS FQH++L +F + *P*FRRNMSFCT K P AGSKWN ENL GCS GPV
Sbjct: 475 IRYSLFQHKSLIKFFAARVAALP*P*FRRNMSFCT*KLPPAGSKWNICENLXGCSPGPVV 296
Query: 366 MEPETKTSMPPWGPDGWQSTVTI*CSQAWKGRDPSLPAMADGPWNFWPSKVSMEVSWYSP 545
M PETKT PPWGP+GWQSTV+I C WKGRDPSLPAMA GP NF PSKVSME SWYSP
Sbjct: 295 MVPETKTRTPPWGPEGWQSTVSILCWHCWKGRDPSLPAMAAGPPNFSPSKVSMEPSWYSP 116
Query: 546 TSAARLVSNVR**CSTKAFATASGSIAITS 635
TSAARL SNV **C T AF T SGSIA S
Sbjct: 115 TSAARLESNVW**C*TNAFDTESGSIASPS 26
Score = 205 bits (442), Expect = 2e-052
Identities = 93/139 (66%), Positives = 103/139 (74%)
Frame = -1 / +2
Query: 602 EGLRGALLPNVRHQPRGAGWAVPGDLHAHLRGPEVPGPVRHCRQARISPFPGLRASDRHR 423
EG+R ALLP+VR QPR AG AVPG LHAHLRG EV P RH QARISP P + A DR+R
Sbjct: 59 EGVRSALLPDVRLQPRRAGGAVPGRLHAHLRGREVRRPRRHRWQARISPLPAVPAQDRYR 238
Query: 422 RLPAIGSPGRHARLRLRFHTHRPRGAPHQVLPGIPFAAGRWVLLRAE*HVPPELWLKTAD 243
RLPA+G+PGR RLRLR H HRPR AP QVL +PFAA LLRAE*HVPPELWL+
Sbjct: 239 RLPALGAPGRRPRLRLRHHHHRPRRAPXQVLTDVPFAASWRELLRAE*HVPPELWLRKGG 418
Query: 242 TLVMKELFKGFMLKR*ILN 186
KEL +GFMLK+*I N
Sbjct: 419 HSGSKELDQGFMLKQ*ISN 475
Score = 119 bits (255), Expect(2) = 2e-032
Identities = 61/94 (64%), Positives = 66/94 (70%)
Frame = +2 / -3
Query: 185 H*VFIVST*NP*TIPSSQEYRLSLAIVQAEHVILHEEGPSGRQQMECLGELDGVLLGAGA 364
H +FIVST* P + Q R SL IVQAEHVILH E PS QQME L EL+ VL GAG
Sbjct: 476 HSIFIVST*IPDQVLCCQSGRPSLTIVQAEHVILHVEAPSSWQQMEHL*ELEXVLAGAGG 297
Query: 365 YGTGDEDEHASLGTRWLAVDGDDLMLAGLERERS 466
G GDEDE A+LG R LAVDG DL+LA LE ERS
Sbjct: 296 DGAGDEDEDAALGPRGLAVDGIDLVLALLEGERS 195
Score = 90.4 bits (191), Expect(2) = 1e-030
Identities = 37/64 (57%), Positives = 41/64 (64%)
Frame = +1 / -2
Query: 397 PGDPMAGXXXXXXXXXXPGKGEIRACRQWRTGPGTSGPRR*AWRSPGTAQPAPRGWCRTF 576
PG P AG G+GEIRAC++WR G TS PRR*AW PGTA PA RGW RT
Sbjct: 264 PGAPRAGSRRYRSCAGTAGRGEIRACQRWRRGRRTSRPRR*AWSRPGTAPPARRGWSRTS 85
Query: 577 GSNA 588
GS+A
Sbjct: 84 GSSA 73
Score = 62.9 bits (131), Expect(2) = 1e-030
Identities = 28/57 (49%), Positives = 37/57 (64%)
Frame = +1 / -2
Query: 178 AATLSIHRFNMKPLNNSFITRVSAVFSHSSGGTCHSARRRTQRPAANGMPGRT*WGA 348
A++ IH FN+ P ++S + +HSSGGTCHSARR + + AANG RT* GA
Sbjct: 483 ASSFDIHCFNINP*SSSLLPEWPPFLNHSSGGTCHSARRSSLQLAANGTSVRT*XGA 313
Score = 39.1 bits (79), Expect(2) = 2e-032
Identities = 17/24 (70%), Positives = 21/24 (87%)
Frame = +2 / -3
Query: 536 VQPNQRRAVGVERSVVMLHEGLRY 607
VQP+QR AVGVER VV+L+E LR+
Sbjct: 125 VQPHQRGAVGVERLVVVLNERLRH 54
>gb|AV916977.1|AV916977 AV916977 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags20f06 5', mRNA sequence
Length = 559
Score = 271 bits (587), Expect = 2e-072
Identities = 110/145 (75%), Positives = 128/145 (88%)
Frame = -2 / +3
Query: 625 AMDPDAVAKAFVEHYYRTFDTNRAALVGLYQETSMLTFEGQKFQGPSAIAGKLGSLPFQA 446
AMDPD+V+KAFV+HYY+TFD+NRAALVGLYQ+ SMLTFEG+KF GP+AIAGKLGSLPFQ
Sbjct: 99 AMDPDSVSKAFVQHYYQTFDSNRAALVGLYQDGSMLTFEGEKFGGPAAIAGKLGSLPFQQ 278
Query: 445 CEHQIVTVDCQPSGPQGGMLVFVSGSIRTGPEEHPIKFSQAFHLLPAAGSFFVQNDMFRL 266
C+H+I TVDCQPSGPQGG+LVFVSG+I TGP EHP+KFSQ FHLLPA GSF+VQNDMFRL
Sbjct: 279 CQHKIDTVDCQPSGPQGGVLVFVSGTITTGPGEHPLKFSQMFHLLPAGGSFYVQNDMFRL 458
Query: 265 NYG*RQPILL**RNCLRVSC*NDEY 191
NYG* + L +N +R C*N+EY
Sbjct: 459 NYG*GRAATLAAKNLIRDLC*NNEY 533
Score = 240 bits (518), Expect = 8e-063
Identities = 106/150 (70%), Positives = 113/150 (75%)
Frame = +3 / -1
Query: 186 IKYSSFQHETLKQFLHHKSIGCL*P*FRRNMSFCTKKDPAAGSKWNAWENLMGCSSGPVR 365
I+YS FQH++L +F + *P*FRRNMSFCT K P AGSKWN ENL GCS GPV
Sbjct: 538 IRYSLFQHKSLIKFFAARVAALP*P*FRRNMSFCT*KLPPAGSKWNICENLRGCSPGPVV 359
Query: 366 MEPETKTSMPPWGPDGWQSTVTI*CSQAWKGRDPSLPAMADGPWNFWPSKVSMEVSWYSP 545
M PETKT PPWGP+GWQSTV+I C WKGRDPSLPAMA GP NF PSKVSME SWYSP
Sbjct: 358 MVPETKTRTPPWGPEGWQSTVSILCWHCWKGRDPSLPAMAAGPPNFSPSKVSMEPSWYSP 179
Query: 546 TSAARLVSNVR**CSTKAFATASGSIAITS 635
TSAARL SNV **C T AF T SGSIA S
Sbjct: 178 TSAARLESNVW**C*TNAFDTESGSIASPS 89
Score = 204 bits (441), Expect = 3e-052
Identities = 93/139 (66%), Positives = 103/139 (74%)
Frame = -1 / +2
Query: 602 EGLRGALLPNVRHQPRGAGWAVPGDLHAHLRGPEVPGPVRHCRQARISPFPGLRASDRHR 423
EG+R ALLP+VR QPR AG AVPG LHAHLRG EV P RH QARISP P + A DR+R
Sbjct: 122 EGVRSALLPDVRLQPRRAGGAVPGRLHAHLRGREVRRPRRHRWQARISPLPAVPAQDRYR 301
Query: 422 RLPAIGSPGRHARLRLRFHTHRPRGAPHQVLPGIPFAAGRWVLLRAE*HVPPELWLKTAD 243
RLPA+G+PGR RLRLR H HRPR AP QVL +PFAA LLRAE*HVPPELWL+
Sbjct: 302 RLPALGAPGRRPRLRLRHHHHRPRRAPPQVLTDVPFAASWRELLRAE*HVPPELWLRKGG 481
Query: 242 TLVMKELFKGFMLKR*ILN 186
KEL +GFMLK+*I N
Sbjct: 482 HSGSKELDQGFMLKQ*ISN 538
Score = 122 bits (262), Expect(2) = 3e-033
Identities = 62/94 (65%), Positives = 67/94 (71%)
Frame = +2 / -3
Query: 185 H*VFIVST*NP*TIPSSQEYRLSLAIVQAEHVILHEEGPSGRQQMECLGELDGVLLGAGA 364
H +FIVST* P + Q R SL IVQAEHVILH E PS QQME L EL+GVL GAG
Sbjct: 539 HSIFIVST*IPDQVLCCQSGRPSLTIVQAEHVILHVEAPSSWQQMEHL*ELEGVLAGAGG 360
Query: 365 YGTGDEDEHASLGTRWLAVDGDDLMLAGLERERS 466
G GDEDE A+LG R LAVDG DL+LA LE ERS
Sbjct: 359 DGAGDEDEDAALGPRGLAVDGIDLVLALLEGERS 258
Score = 90.4 bits (191), Expect(2) = 1e-030
Identities = 37/64 (57%), Positives = 41/64 (64%)
Frame = +1 / -2
Query: 397 PGDPMAGXXXXXXXXXXPGKGEIRACRQWRTGPGTSGPRR*AWRSPGTAQPAPRGWCRTF 576
PG P AG G+GEIRAC++WR G TS PRR*AW PGTA PA RGW RT
Sbjct: 327 PGAPRAGSRRYRSCAGTAGRGEIRACQRWRRGRRTSRPRR*AWSRPGTAPPARRGWSRTS 148
Query: 577 GSNA 588
GS+A
Sbjct: 147 GSSA 136
Score = 62.9 bits (131), Expect(2) = 1e-030
Identities = 28/57 (49%), Positives = 37/57 (64%)
Frame = +1 / -2
Query: 178 AATLSIHRFNMKPLNNSFITRVSAVFSHSSGGTCHSARRRTQRPAANGMPGRT*WGA 348
A++ IH FN+ P ++S + +HSSGGTCHSARR + + AANG RT* GA
Sbjct: 546 ASSFDIHCFNINP*SSSLLPEWPPFLNHSSGGTCHSARRSSLQLAANGTSVRT*GGA 376
Score = 39.1 bits (79), Expect(2) = 3e-033
Identities = 17/24 (70%), Positives = 21/24 (87%)
Frame = +2 / -3
Query: 536 VQPNQRRAVGVERSVVMLHEGLRY 607
VQP+QR AVGVER VV+L+E LR+
Sbjct: 188 VQPHQRGAVGVERLVVVLNERLRH 117
>gb|AV923559.1|AV923559 AV923559 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp.
vulgare cDNA clone basd13j07 5', mRNA sequence
Length = 628
Score = 271 bits (587), Expect = 2e-072
Identities = 110/145 (75%), Positives = 128/145 (88%)
Frame = -2 / +1
Query: 625 AMDPDAVAKAFVEHYYRTFDTNRAALVGLYQETSMLTFEGQKFQGPSAIAGKLGSLPFQA 446
AMDPD+V+KAFV+HYY+TFD+NRAALVGLYQ+ SMLTFEG+KF GP+AIAGKLGSLPFQ
Sbjct: 85 AMDPDSVSKAFVQHYYQTFDSNRAALVGLYQDGSMLTFEGEKFGGPAAIAGKLGSLPFQQ 264
Query: 445 CEHQIVTVDCQPSGPQGGMLVFVSGSIRTGPEEHPIKFSQAFHLLPAAGSFFVQNDMFRL 266
C+H+I TVDCQPSGPQGG+LVFVSG+I TGP EHP+KFSQ FHLLPA GSF+VQNDMFRL
Sbjct: 265 CQHKIDTVDCQPSGPQGGVLVFVSGTITTGPGEHPLKFSQMFHLLPAGGSFYVQNDMFRL 444
Query: 265 NYG*RQPILL**RNCLRVSC*NDEY 191
NYG* + L +N +R C*N+EY
Sbjct: 445 NYG*GRAATLAAKNLIRDLC*NNEY 519
Score = 240 bits (518), Expect = 8e-063
Identities = 106/150 (70%), Positives = 113/150 (75%)
Frame = +3 / -3
Query: 186 IKYSSFQHETLKQFLHHKSIGCL*P*FRRNMSFCTKKDPAAGSKWNAWENLMGCSSGPVR 365
I+YS FQH++L +F + *P*FRRNMSFCT K P AGSKWN ENL GCS GPV
Sbjct: 524 IRYSLFQHKSLIKFFAARVAALP*P*FRRNMSFCT*KLPPAGSKWNICENLRGCSPGPVV 345
Query: 366 MEPETKTSMPPWGPDGWQSTVTI*CSQAWKGRDPSLPAMADGPWNFWPSKVSMEVSWYSP 545
M PETKT PPWGP+GWQSTV+I C WKGRDPSLPAMA GP NF PSKVSME SWYSP
Sbjct: 344 MVPETKTRTPPWGPEGWQSTVSILCWHCWKGRDPSLPAMAAGPPNFSPSKVSMEPSWYSP 165
Query: 546 TSAARLVSNVR**CSTKAFATASGSIAITS 635
TSAARL SNV **C T AF T SGSIA S
Sbjct: 164 TSAARLESNVW**C*TNAFDTESGSIASPS 75
Score = 204 bits (441), Expect = 3e-052
Identities = 93/139 (66%), Positives = 103/139 (74%)
Frame = -1 / +3
Query: 602 EGLRGALLPNVRHQPRGAGWAVPGDLHAHLRGPEVPGPVRHCRQARISPFPGLRASDRHR 423
EG+R ALLP+VR QPR AG AVPG LHAHLRG EV P RH QARISP P + A DR+R
Sbjct: 108 EGVRSALLPDVRLQPRRAGGAVPGRLHAHLRGREVRRPRRHRWQARISPLPAVPAQDRYR 287
Query: 422 RLPAIGSPGRHARLRLRFHTHRPRGAPHQVLPGIPFAAGRWVLLRAE*HVPPELWLKTAD 243
RLPA+G+PGR RLRLR H HRPR AP QVL +PFAA LLRAE*HVPPELWL+
Sbjct: 288 RLPALGAPGRRPRLRLRHHHHRPRRAPPQVLTDVPFAASWRELLRAE*HVPPELWLRKGG 467
Query: 242 TLVMKELFKGFMLKR*ILN 186
KEL +GFMLK+*I N
Sbjct: 468 HSGSKELDQGFMLKQ*ISN 524
Score = 122 bits (262), Expect(2) = 3e-033
Identities = 62/94 (65%), Positives = 67/94 (71%)
Frame = +2 / -2
Query: 185 H*VFIVST*NP*TIPSSQEYRLSLAIVQAEHVILHEEGPSGRQQMECLGELDGVLLGAGA 364
H +FIVST* P + Q R SL IVQAEHVILH E PS QQME L EL+GVL GAG
Sbjct: 525 HSIFIVST*IPDQVLCCQSGRPSLTIVQAEHVILHVEAPSSWQQMEHL*ELEGVLAGAGG 346
Query: 365 YGTGDEDEHASLGTRWLAVDGDDLMLAGLERERS 466
G GDEDE A+LG R LAVDG DL+LA LE ERS
Sbjct: 345 DGAGDEDEDAALGPRGLAVDGIDLVLALLEGERS 244
Score = 90.4 bits (191), Expect(2) = 1e-030
Identities = 37/64 (57%), Positives = 41/64 (64%)
Frame = +1 / -1
Query: 397 PGDPMAGXXXXXXXXXXPGKGEIRACRQWRTGPGTSGPRR*AWRSPGTAQPAPRGWCRTF 576
PG P AG G+GEIRAC++WR G TS PRR*AW PGTA PA RGW RT
Sbjct: 313 PGAPRAGSRRYRSCAGTAGRGEIRACQRWRRGRRTSRPRR*AWSRPGTAPPARRGWSRTS 134
Query: 577 GSNA 588
GS+A
Sbjct: 133 GSSA 122
Score = 62.9 bits (131), Expect(2) = 1e-030
Identities = 28/57 (49%), Positives = 37/57 (64%)
Frame = +1 / -1
Query: 178 AATLSIHRFNMKPLNNSFITRVSAVFSHSSGGTCHSARRRTQRPAANGMPGRT*WGA 348
A++ IH FN+ P ++S + +HSSGGTCHSARR + + AANG RT* GA
Sbjct: 532 ASSFDIHCFNINP*SSSLLPEWPPFLNHSSGGTCHSARRSSLQLAANGTSVRT*GGA 362
Score = 39.1 bits (79), Expect(2) = 3e-033
Identities = 17/24 (70%), Positives = 21/24 (87%)
Frame = +2 / -2
Query: 536 VQPNQRRAVGVERSVVMLHEGLRY 607
VQP+QR AVGVER VV+L+E LR+
Sbjct: 174 VQPHQRGAVGVERLVVVLNERLRH 103
>gb|BQ460900.1|BQ460900 HE01M16r HE Hordeum vulgare subsp. vulgare cDNA clone HE01M16
5-PRIME, mRNA sequence
Length = 509
Score = 271 bits (587), Expect = 2e-072
Identities = 110/145 (75%), Positives = 128/145 (88%)
Frame = -2 / +2
Query: 625 AMDPDAVAKAFVEHYYRTFDTNRAALVGLYQETSMLTFEGQKFQGPSAIAGKLGSLPFQA 446
AMDPD+V+KAFV+HYY+TFD+NRAALVGLYQ+ SMLTFEG+KF GP+AIAGKLGSLPFQ
Sbjct: 47 AMDPDSVSKAFVQHYYQTFDSNRAALVGLYQDGSMLTFEGEKFGGPAAIAGKLGSLPFQQ 226
Query: 445 CEHQIVTVDCQPSGPQGGMLVFVSGSIRTGPEEHPIKFSQAFHLLPAAGSFFVQNDMFRL 266
C+H+I TVDCQPSGPQGG+LVFVSG+I TGP EHP+KFSQ FHLLPA GSF+VQNDMFRL
Sbjct: 227 CQHKIDTVDCQPSGPQGGVLVFVSGTITTGPGEHPLKFSQMFHLLPAGGSFYVQNDMFRL 406
Query: 265 NYG*RQPILL**RNCLRVSC*NDEY 191
NYG* + L +N +R C*N+EY
Sbjct: 407 NYG*GRAATLAAKNLIRDLC*NNEY 481
Score = 239 bits (517), Expect = 1e-062
Identities = 105/147 (71%), Positives = 112/147 (76%)
Frame = +3 / -3
Query: 186 IKYSSFQHETLKQFLHHKSIGCL*P*FRRNMSFCTKKDPAAGSKWNAWENLMGCSSGPVR 365
I+YS FQH++L +F + *P*FRRNMSFCT K P AGSKWN ENL GCS GPV
Sbjct: 486 IRYSLFQHKSLIKFFAARVAALP*P*FRRNMSFCT*KLPPAGSKWNICENLRGCSPGPVV 307
Query: 366 MEPETKTSMPPWGPDGWQSTVTI*CSQAWKGRDPSLPAMADGPWNFWPSKVSMEVSWYSP 545
M PETKT PPWGP+GWQSTV+I C WKGRDPSLPAMA GP NF PSKVSME SWYSP
Sbjct: 306 MVPETKTRTPPWGPEGWQSTVSILCWHCWKGRDPSLPAMAAGPPNFSPSKVSMEPSWYSP 127
Query: 546 TSAARLVSNVR**CSTKAFATASGSIA 626
TSAARL SNV **C T AF T SGSIA
Sbjct: 126 TSAARLESNVW**C*TNAFDTESGSIA 46
Score = 204 bits (441), Expect = 3e-052
Identities = 93/139 (66%), Positives = 103/139 (74%)
Frame = -1 / +1
Query: 602 EGLRGALLPNVRHQPRGAGWAVPGDLHAHLRGPEVPGPVRHCRQARISPFPGLRASDRHR 423
EG+R ALLP+VR QPR AG AVPG LHAHLRG EV P RH QARISP P + A DR+R
Sbjct: 70 EGVRSALLPDVRLQPRRAGGAVPGRLHAHLRGREVRRPRRHRWQARISPLPAVPAQDRYR 249
Query: 422 RLPAIGSPGRHARLRLRFHTHRPRGAPHQVLPGIPFAAGRWVLLRAE*HVPPELWLKTAD 243
RLPA+G+PGR RLRLR H HRPR AP QVL +PFAA LLRAE*HVPPELWL+
Sbjct: 250 RLPALGAPGRRPRLRLRHHHHRPRRAPPQVLTDVPFAASWRELLRAE*HVPPELWLRKGG 429
Query: 242 TLVMKELFKGFMLKR*ILN 186
KEL +GFMLK+*I N
Sbjct: 430 HSGSKELDQGFMLKQ*ISN 486
Score = 122 bits (262), Expect(2) = 3e-033
Identities = 62/94 (65%), Positives = 67/94 (71%)
Frame = +2 / -2
Query: 185 H*VFIVST*NP*TIPSSQEYRLSLAIVQAEHVILHEEGPSGRQQMECLGELDGVLLGAGA 364
H +FIVST* P + Q R SL IVQAEHVILH E PS QQME L EL+GVL GAG
Sbjct: 487 HSIFIVST*IPDQVLCCQSGRPSLTIVQAEHVILHVEAPSSWQQMEHL*ELEGVLAGAGG 308
Query: 365 YGTGDEDEHASLGTRWLAVDGDDLMLAGLERERS 466
G GDEDE A+LG R LAVDG DL+LA LE ERS
Sbjct: 307 DGAGDEDEDAALGPRGLAVDGIDLVLALLEGERS 206
Score = 90.4 bits (191), Expect(2) = 1e-030
Identities = 37/64 (57%), Positives = 41/64 (64%)
Frame = +1 / -1
Query: 397 PGDPMAGXXXXXXXXXXPGKGEIRACRQWRTGPGTSGPRR*AWRSPGTAQPAPRGWCRTF 576
PG P AG G+GEIRAC++WR G TS PRR*AW PGTA PA RGW RT
Sbjct: 275 PGAPRAGSRRYRSCAGTAGRGEIRACQRWRRGRRTSRPRR*AWSRPGTAPPARRGWSRTS 96
Query: 577 GSNA 588
GS+A
Sbjct: 95 GSSA 84
Score = 62.9 bits (131), Expect(2) = 1e-030
Identities = 28/57 (49%), Positives = 37/57 (64%)
Frame = +1 / -1
Query: 178 AATLSIHRFNMKPLNNSFITRVSAVFSHSSGGTCHSARRRTQRPAANGMPGRT*WGA 348
A++ IH FN+ P ++S + +HSSGGTCHSARR + + AANG RT* GA
Sbjct: 494 ASSFDIHCFNINP*SSSLLPEWPPFLNHSSGGTCHSARRSSLQLAANGTSVRT*GGA 324
Score = 39.1 bits (79), Expect(2) = 3e-033
Identities = 17/24 (70%), Positives = 21/24 (87%)
Frame = +2 / -2
Query: 536 VQPNQRRAVGVERSVVMLHEGLRY 607
VQP+QR AVGVER VV+L+E LR+
Sbjct: 136 VQPHQRGAVGVERLVVVLNERLRH 65
>gb|BQ466625.1|BQ466625 HS01B09T HS Hordeum vulgare subsp. vulgare cDNA clone HS01B09
5-PRIME, mRNA sequence
Length = 572
Score = 271 bits (587), Expect = 2e-072
Identities = 110/145 (75%), Positives = 128/145 (88%)
Frame = -2 / +2
Query: 625 AMDPDAVAKAFVEHYYRTFDTNRAALVGLYQETSMLTFEGQKFQGPSAIAGKLGSLPFQA 446
AMDPD+V+KAFV+HYY+TFD+NRAALVGLYQ+ SMLTFEG+KF GP+AIAGKLGSLPFQ
Sbjct: 101 AMDPDSVSKAFVQHYYQTFDSNRAALVGLYQDGSMLTFEGEKFGGPAAIAGKLGSLPFQQ 280
Query: 445 CEHQIVTVDCQPSGPQGGMLVFVSGSIRTGPEEHPIKFSQAFHLLPAAGSFFVQNDMFRL 266
C+H+I TVDCQPSGPQGG+LVFVSG+I TGP EHP+KFSQ FHLLPA GSF+VQNDMFRL
Sbjct: 281 CQHKIDTVDCQPSGPQGGVLVFVSGTITTGPGEHPLKFSQMFHLLPAGGSFYVQNDMFRL 460
Query: 265 NYG*RQPILL**RNCLRVSC*NDEY 191
NYG* + L +N +R C*N+EY
Sbjct: 461 NYG*GRAATLAAKNLIRDLC*NNEY 535
Score = 240 bits (518), Expect = 8e-063
Identities = 106/150 (70%), Positives = 113/150 (75%)
Frame = +3 / -3
Query: 186 IKYSSFQHETLKQFLHHKSIGCL*P*FRRNMSFCTKKDPAAGSKWNAWENLMGCSSGPVR 365
I+YS FQH++L +F + *P*FRRNMSFCT K P AGSKWN ENL GCS GPV
Sbjct: 540 IRYSLFQHKSLIKFFAARVAALP*P*FRRNMSFCT*KLPPAGSKWNICENLRGCSPGPVV 361
Query: 366 MEPETKTSMPPWGPDGWQSTVTI*CSQAWKGRDPSLPAMADGPWNFWPSKVSMEVSWYSP 545
M PETKT PPWGP+GWQSTV+I C WKGRDPSLPAMA GP NF PSKVSME SWYSP
Sbjct: 360 MVPETKTRTPPWGPEGWQSTVSILCWHCWKGRDPSLPAMAAGPPNFSPSKVSMEPSWYSP 181
Query: 546 TSAARLVSNVR**CSTKAFATASGSIAITS 635
TSAARL SNV **C T AF T SGSIA S
Sbjct: 180 TSAARLESNVW**C*TNAFDTESGSIASPS 91
Score = 204 bits (441), Expect = 3e-052
Identities = 93/139 (66%), Positives = 103/139 (74%)
Frame = -1 / +1
Query: 602 EGLRGALLPNVRHQPRGAGWAVPGDLHAHLRGPEVPGPVRHCRQARISPFPGLRASDRHR 423
EG+R ALLP+VR QPR AG AVPG LHAHLRG EV P RH QARISP P + A DR+R
Sbjct: 124 EGVRSALLPDVRLQPRRAGGAVPGRLHAHLRGREVRRPRRHRWQARISPLPAVPAQDRYR 303
Query: 422 RLPAIGSPGRHARLRLRFHTHRPRGAPHQVLPGIPFAAGRWVLLRAE*HVPPELWLKTAD 243
RLPA+G+PGR RLRLR H HRPR AP QVL +PFAA LLRAE*HVPPELWL+
Sbjct: 304 RLPALGAPGRRPRLRLRHHHHRPRRAPPQVLTDVPFAASWRELLRAE*HVPPELWLRKGG 483
Query: 242 TLVMKELFKGFMLKR*ILN 186
KEL +GFMLK+*I N
Sbjct: 484 HSGSKELDQGFMLKQ*ISN 540
Score = 122 bits (262), Expect(2) = 3e-033
Identities = 62/94 (65%), Positives = 67/94 (71%)
Frame = +2 / -2
Query: 185 H*VFIVST*NP*TIPSSQEYRLSLAIVQAEHVILHEEGPSGRQQMECLGELDGVLLGAGA 364
H +FIVST* P + Q R SL IVQAEHVILH E PS QQME L EL+GVL GAG
Sbjct: 541 HSIFIVST*IPDQVLCCQSGRPSLTIVQAEHVILHVEAPSSWQQMEHL*ELEGVLAGAGG 362
Query: 365 YGTGDEDEHASLGTRWLAVDGDDLMLAGLERERS 466
G GDEDE A+LG R LAVDG DL+LA LE ERS
Sbjct: 361 DGAGDEDEDAALGPRGLAVDGIDLVLALLEGERS 260
Score = 90.4 bits (191), Expect(2) = 1e-030
Identities = 37/64 (57%), Positives = 41/64 (64%)
Frame = +1 / -1
Query: 397 PGDPMAGXXXXXXXXXXPGKGEIRACRQWRTGPGTSGPRR*AWRSPGTAQPAPRGWCRTF 576
PG P AG G+GEIRAC++WR G TS PRR*AW PGTA PA RGW RT
Sbjct: 329 PGAPRAGSRRYRSCAGTAGRGEIRACQRWRRGRRTSRPRR*AWSRPGTAPPARRGWSRTS 150
Query: 577 GSNA 588
GS+A
Sbjct: 149 GSSA 138
Score = 62.9 bits (131), Expect(2) = 1e-030
Identities = 28/57 (49%), Positives = 37/57 (64%)
Frame = +1 / -1
Query: 178 AATLSIHRFNMKPLNNSFITRVSAVFSHSSGGTCHSARRRTQRPAANGMPGRT*WGA 348
A++ IH FN+ P ++S + +HSSGGTCHSARR + + AANG RT* GA
Sbjct: 548 ASSFDIHCFNINP*SSSLLPEWPPFLNHSSGGTCHSARRSSLQLAANGTSVRT*GGA 378
Score = 39.1 bits (79), Expect(2) = 3e-033
Identities = 17/24 (70%), Positives = 21/24 (87%)
Frame = +2 / -2
Query: 536 VQPNQRRAVGVERSVVMLHEGLRY 607
VQP+QR AVGVER VV+L+E LR+
Sbjct: 190 VQPHQRGAVGVERLVVVLNERLRH 119
>gb|BQ469765.1|BQ469765 HZ01M24r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ01M24
5-PRIME, mRNA sequence
Length = 537
Score = 271 bits (587), Expect = 2e-072
Identities = 110/145 (75%), Positives = 128/145 (88%)
Frame = -2 / +3
Query: 625 AMDPDAVAKAFVEHYYRTFDTNRAALVGLYQETSMLTFEGQKFQGPSAIAGKLGSLPFQA 446
AMDPD+V+KAFV+HYY+TFD+NRAALVGLYQ+ SMLTFEG+KF GP+AIAGKLGSLPFQ
Sbjct: 75 AMDPDSVSKAFVQHYYQTFDSNRAALVGLYQDGSMLTFEGEKFGGPAAIAGKLGSLPFQQ 254
Query: 445 CEHQIVTVDCQPSGPQGGMLVFVSGSIRTGPEEHPIKFSQAFHLLPAAGSFFVQNDMFRL 266
C+H+I TVDCQPSGPQGG+LVFVSG+I TGP EHP+KFSQ FHLLPA GSF+VQNDMFRL
Sbjct: 255 CQHKIDTVDCQPSGPQGGVLVFVSGTITTGPGEHPLKFSQMFHLLPAGGSFYVQNDMFRL 434
Query: 265 NYG*RQPILL**RNCLRVSC*NDEY 191
NYG* + L +N +R C*N+EY
Sbjct: 435 NYG*GRAATLAAKNLIRDLC*NNEY 509
Score = 240 bits (518), Expect = 8e-063
Identities = 106/150 (70%), Positives = 113/150 (75%)
Frame = +3 / -3
Query: 186 IKYSSFQHETLKQFLHHKSIGCL*P*FRRNMSFCTKKDPAAGSKWNAWENLMGCSSGPVR 365
I+YS FQH++L +F + *P*FRRNMSFCT K P AGSKWN ENL GCS GPV
Sbjct: 514 IRYSLFQHKSLIKFFAARVAALP*P*FRRNMSFCT*KLPPAGSKWNICENLRGCSPGPVV 335
Query: 366 MEPETKTSMPPWGPDGWQSTVTI*CSQAWKGRDPSLPAMADGPWNFWPSKVSMEVSWYSP 545
M PETKT PPWGP+GWQSTV+I C WKGRDPSLPAMA GP NF PSKVSME SWYSP
Sbjct: 334 MVPETKTRTPPWGPEGWQSTVSILCWHCWKGRDPSLPAMAAGPPNFSPSKVSMEPSWYSP 155
Query: 546 TSAARLVSNVR**CSTKAFATASGSIAITS 635
TSAARL SNV **C T AF T SGSIA S
Sbjct: 154 TSAARLESNVW**C*TNAFDTESGSIASPS 65
Score = 204 bits (441), Expect = 3e-052
Identities = 93/139 (66%), Positives = 103/139 (74%)
Frame = -1 / +2
Query: 602 EGLRGALLPNVRHQPRGAGWAVPGDLHAHLRGPEVPGPVRHCRQARISPFPGLRASDRHR 423
EG+R ALLP+VR QPR AG AVPG LHAHLRG EV P RH QARISP P + A DR+R
Sbjct: 98 EGVRSALLPDVRLQPRRAGGAVPGRLHAHLRGREVRRPRRHRWQARISPLPAVPAQDRYR 277
Query: 422 RLPAIGSPGRHARLRLRFHTHRPRGAPHQVLPGIPFAAGRWVLLRAE*HVPPELWLKTAD 243
RLPA+G+PGR RLRLR H HRPR AP QVL +PFAA LLRAE*HVPPELWL+
Sbjct: 278 RLPALGAPGRRPRLRLRHHHHRPRRAPPQVLTDVPFAASWRELLRAE*HVPPELWLRKGG 457
Query: 242 TLVMKELFKGFMLKR*ILN 186
KEL +GFMLK+*I N
Sbjct: 458 HSGSKELDQGFMLKQ*ISN 514
Score = 122 bits (262), Expect(2) = 3e-033
Identities = 62/94 (65%), Positives = 67/94 (71%)
Frame = +2 / -2
Query: 185 H*VFIVST*NP*TIPSSQEYRLSLAIVQAEHVILHEEGPSGRQQMECLGELDGVLLGAGA 364
H +FIVST* P + Q R SL IVQAEHVILH E PS QQME L EL+GVL GAG
Sbjct: 515 HSIFIVST*IPDQVLCCQSGRPSLTIVQAEHVILHVEAPSSWQQMEHL*ELEGVLAGAGG 336
Query: 365 YGTGDEDEHASLGTRWLAVDGDDLMLAGLERERS 466
G GDEDE A+LG R LAVDG DL+LA LE ERS
Sbjct: 335 DGAGDEDEDAALGPRGLAVDGIDLVLALLEGERS 234
Score = 90.4 bits (191), Expect(2) = 1e-030
Identities = 37/64 (57%), Positives = 41/64 (64%)
Frame = +1 / -1
Query: 397 PGDPMAGXXXXXXXXXXPGKGEIRACRQWRTGPGTSGPRR*AWRSPGTAQPAPRGWCRTF 576
PG P AG G+GEIRAC++WR G TS PRR*AW PGTA PA RGW RT
Sbjct: 303 PGAPRAGSRRYRSCAGTAGRGEIRACQRWRRGRRTSRPRR*AWSRPGTAPPARRGWSRTS 124
Query: 577 GSNA 588
GS+A
Sbjct: 123 GSSA 112
Score = 62.9 bits (131), Expect(2) = 1e-030
Identities = 28/57 (49%), Positives = 37/57 (64%)
Frame = +1 / -1
Query: 178 AATLSIHRFNMKPLNNSFITRVSAVFSHSSGGTCHSARRRTQRPAANGMPGRT*WGA 348
A++ IH FN+ P ++S + +HSSGGTCHSARR + + AANG RT* GA
Sbjct: 522 ASSFDIHCFNINP*SSSLLPEWPPFLNHSSGGTCHSARRSSLQLAANGTSVRT*GGA 352
Score = 39.1 bits (79), Expect(2) = 3e-033
Identities = 17/24 (70%), Positives = 21/24 (87%)
Frame = +2 / -2
Query: 536 VQPNQRRAVGVERSVVMLHEGLRY 607
VQP+QR AVGVER VV+L+E LR+
Sbjct: 164 VQPHQRGAVGVERLVVVLNERLRH 93
>gb|BM368188.2|BM368188 EBed01_SQ002_G17_R endosperm, 6 DPA, no treatment, cv Optic, EBed01
Hordeum vulgare subsp. vulgare cDNA clone
EBed01_SQ002_G17 5', mRNA sequence
Length = 647
Score = 271 bits (587), Expect = 2e-072
Identities = 110/145 (75%), Positives = 128/145 (88%)
Frame = -2 / +2
Query: 625 AMDPDAVAKAFVEHYYRTFDTNRAALVGLYQETSMLTFEGQKFQGPSAIAGKLGSLPFQA 446
AMDPD+V+KAFV+HYY+TFD+NRAALVGLYQ+ SMLTFEG+KF GP+AIAGKLGSLPFQ
Sbjct: 65 AMDPDSVSKAFVQHYYQTFDSNRAALVGLYQDGSMLTFEGEKFGGPAAIAGKLGSLPFQQ 244
Query: 445 CEHQIVTVDCQPSGPQGGMLVFVSGSIRTGPEEHPIKFSQAFHLLPAAGSFFVQNDMFRL 266
C+H+I TVDCQPSGPQGG+LVFVSG+I TGP EHP+KFSQ FHLLPA GSF+VQNDMFRL
Sbjct: 245 CQHKIDTVDCQPSGPQGGVLVFVSGTITTGPGEHPLKFSQMFHLLPAGGSFYVQNDMFRL 424
Query: 265 NYG*RQPILL**RNCLRVSC*NDEY 191
NYG* + L +N +R C*N+EY
Sbjct: 425 NYG*GRAATLAAKNLIRDLC*NNEY 499
Score = 240 bits (518), Expect = 8e-063
Identities = 106/150 (70%), Positives = 113/150 (75%)
Frame = +3 / -3
Query: 186 IKYSSFQHETLKQFLHHKSIGCL*P*FRRNMSFCTKKDPAAGSKWNAWENLMGCSSGPVR 365
I+YS FQH++L +F + *P*FRRNMSFCT K P AGSKWN ENL GCS GPV
Sbjct: 504 IRYSLFQHKSLIKFFAARVAALP*P*FRRNMSFCT*KLPPAGSKWNICENLRGCSPGPVV 325
Query: 366 MEPETKTSMPPWGPDGWQSTVTI*CSQAWKGRDPSLPAMADGPWNFWPSKVSMEVSWYSP 545
M PETKT PPWGP+GWQSTV+I C WKGRDPSLPAMA GP NF PSKVSME SWYSP
Sbjct: 324 MVPETKTRTPPWGPEGWQSTVSILCWHCWKGRDPSLPAMAAGPPNFSPSKVSMEPSWYSP 145
Query: 546 TSAARLVSNVR**CSTKAFATASGSIAITS 635
TSAARL SNV **C T AF T SGSIA S
Sbjct: 144 TSAARLESNVW**C*TNAFDTESGSIASPS 55
Score = 204 bits (441), Expect = 3e-052
Identities = 93/139 (66%), Positives = 103/139 (74%)
Frame = -1 / +1
Query: 602 EGLRGALLPNVRHQPRGAGWAVPGDLHAHLRGPEVPGPVRHCRQARISPFPGLRASDRHR 423
EG+R ALLP+VR QPR AG AVPG LHAHLRG EV P RH QARISP P + A DR+R
Sbjct: 88 EGVRSALLPDVRLQPRRAGGAVPGRLHAHLRGREVRRPRRHRWQARISPLPAVPAQDRYR 267
Query: 422 RLPAIGSPGRHARLRLRFHTHRPRGAPHQVLPGIPFAAGRWVLLRAE*HVPPELWLKTAD 243
RLPA+G+PGR RLRLR H HRPR AP QVL +PFAA LLRAE*HVPPELWL+
Sbjct: 268 RLPALGAPGRRPRLRLRHHHHRPRRAPPQVLTDVPFAASWRELLRAE*HVPPELWLRKGG 447
Query: 242 TLVMKELFKGFMLKR*ILN 186
KEL +GFMLK+*I N
Sbjct: 448 HSGSKELDQGFMLKQ*ISN 504
Score = 122 bits (262), Expect(2) = 3e-033
Identities = 62/94 (65%), Positives = 67/94 (71%)
Frame = +2 / -2
Query: 185 H*VFIVST*NP*TIPSSQEYRLSLAIVQAEHVILHEEGPSGRQQMECLGELDGVLLGAGA 364
H +FIVST* P + Q R SL IVQAEHVILH E PS QQME L EL+GVL GAG
Sbjct: 505 HSIFIVST*IPDQVLCCQSGRPSLTIVQAEHVILHVEAPSSWQQMEHL*ELEGVLAGAGG 326
Query: 365 YGTGDEDEHASLGTRWLAVDGDDLMLAGLERERS 466
G GDEDE A+LG R LAVDG DL+LA LE ERS
Sbjct: 325 DGAGDEDEDAALGPRGLAVDGIDLVLALLEGERS 224
Score = 90.4 bits (191), Expect(2) = 1e-030
Identities = 37/64 (57%), Positives = 41/64 (64%)
Frame = +1 / -1
Query: 397 PGDPMAGXXXXXXXXXXPGKGEIRACRQWRTGPGTSGPRR*AWRSPGTAQPAPRGWCRTF 576
PG P AG G+GEIRAC++WR G TS PRR*AW PGTA PA RGW RT
Sbjct: 293 PGAPRAGSRRYRSCAGTAGRGEIRACQRWRRGRRTSRPRR*AWSRPGTAPPARRGWSRTS 114
Query: 577 GSNA 588
GS+A
Sbjct: 113 GSSA 102
Score = 62.9 bits (131), Expect(2) = 1e-030
Identities = 28/57 (49%), Positives = 37/57 (64%)
Frame = +1 / -1
Query: 178 AATLSIHRFNMKPLNNSFITRVSAVFSHSSGGTCHSARRRTQRPAANGMPGRT*WGA 348
A++ IH FN+ P ++S + +HSSGGTCHSARR + + AANG RT* GA
Sbjct: 512 ASSFDIHCFNINP*SSSLLPEWPPFLNHSSGGTCHSARRSSLQLAANGTSVRT*GGA 342
Score = 39.1 bits (79), Expect(2) = 3e-033
Identities = 17/24 (70%), Positives = 21/24 (87%)
Frame = +2 / -2
Query: 536 VQPNQRRAVGVERSVVMLHEGLRY 607
VQP+QR AVGVER VV+L+E LR+
Sbjct: 154 VQPHQRGAVGVERLVVVLNERLRH 83
>gb|BM377927.2|BM377927 EBem04_SQ004_J22_R embryo, 12 DPA, no treatment, cv Optic, EBem04
Hordeum vulgare subsp. vulgare cDNA clone
EBem04_SQ004_J22 5', mRNA sequence
Length = 669
Score = 271 bits (587), Expect = 2e-072
Identities = 110/145 (75%), Positives = 128/145 (88%)
Frame = -2 / +3
Query: 625 AMDPDAVAKAFVEHYYRTFDTNRAALVGLYQETSMLTFEGQKFQGPSAIAGKLGSLPFQA 446
AMDPD+V+KAFV+HYY+TFD+NRAALVGLYQ+ SMLTFEG+KF GP+AIAGKLGSLPFQ
Sbjct: 120 AMDPDSVSKAFVQHYYQTFDSNRAALVGLYQDGSMLTFEGEKFGGPAAIAGKLGSLPFQQ 299
Query: 445 CEHQIVTVDCQPSGPQGGMLVFVSGSIRTGPEEHPIKFSQAFHLLPAAGSFFVQNDMFRL 266
C+H+I TVDCQPSGPQGG+LVFVSG+I TGP EHP+KFSQ FHLLPA GSF+VQNDMFRL
Sbjct: 300 CQHKIDTVDCQPSGPQGGVLVFVSGTITTGPGEHPLKFSQMFHLLPAGGSFYVQNDMFRL 479
Query: 265 NYG*RQPILL**RNCLRVSC*NDEY 191
NYG* + L +N +R C*N+EY
Sbjct: 480 NYG*GRAATLAAKNLIRDLC*NNEY 554
Score = 240 bits (518), Expect = 8e-063
Identities = 106/150 (70%), Positives = 113/150 (75%)
Frame = +3 / -3
Query: 186 IKYSSFQHETLKQFLHHKSIGCL*P*FRRNMSFCTKKDPAAGSKWNAWENLMGCSSGPVR 365
I+YS FQH++L +F + *P*FRRNMSFCT K P AGSKWN ENL GCS GPV
Sbjct: 559 IRYSLFQHKSLIKFFAARVAALP*P*FRRNMSFCT*KLPPAGSKWNICENLRGCSPGPVV 380
Query: 366 MEPETKTSMPPWGPDGWQSTVTI*CSQAWKGRDPSLPAMADGPWNFWPSKVSMEVSWYSP 545
M PETKT PPWGP+GWQSTV+I C WKGRDPSLPAMA GP NF PSKVSME SWYSP
Sbjct: 379 MVPETKTRTPPWGPEGWQSTVSILCWHCWKGRDPSLPAMAAGPPNFSPSKVSMEPSWYSP 200
Query: 546 TSAARLVSNVR**CSTKAFATASGSIAITS 635
TSAARL SNV **C T AF T SGSIA S
Sbjct: 199 TSAARLESNVW**C*TNAFDTESGSIASPS 110
Score = 204 bits (441), Expect = 3e-052
Identities = 93/139 (66%), Positives = 103/139 (74%)
Frame = -1 / +2
Query: 602 EGLRGALLPNVRHQPRGAGWAVPGDLHAHLRGPEVPGPVRHCRQARISPFPGLRASDRHR 423
EG+R ALLP+VR QPR AG AVPG LHAHLRG EV P RH QARISP P + A DR+R
Sbjct: 143 EGVRSALLPDVRLQPRRAGGAVPGRLHAHLRGREVRRPRRHRWQARISPLPAVPAQDRYR 322
Query: 422 RLPAIGSPGRHARLRLRFHTHRPRGAPHQVLPGIPFAAGRWVLLRAE*HVPPELWLKTAD 243
RLPA+G+PGR RLRLR H HRPR AP QVL +PFAA LLRAE*HVPPELWL+
Sbjct: 323 RLPALGAPGRRPRLRLRHHHHRPRRAPPQVLTDVPFAASWRELLRAE*HVPPELWLRKGG 502
Query: 242 TLVMKELFKGFMLKR*ILN 186
KEL +GFMLK+*I N
Sbjct: 503 HSGSKELDQGFMLKQ*ISN 559
Score = 122 bits (262), Expect(2) = 3e-033
Identities = 62/94 (65%), Positives = 67/94 (71%)
Frame = +2 / -2
Query: 185 H*VFIVST*NP*TIPSSQEYRLSLAIVQAEHVILHEEGPSGRQQMECLGELDGVLLGAGA 364
H +FIVST* P + Q R SL IVQAEHVILH E PS QQME L EL+GVL GAG
Sbjct: 560 HSIFIVST*IPDQVLCCQSGRPSLTIVQAEHVILHVEAPSSWQQMEHL*ELEGVLAGAGG 381
Query: 365 YGTGDEDEHASLGTRWLAVDGDDLMLAGLERERS 466
G GDEDE A+LG R LAVDG DL+LA LE ERS
Sbjct: 380 DGAGDEDEDAALGPRGLAVDGIDLVLALLEGERS 279
Score = 90.4 bits (191), Expect(2) = 1e-030
Identities = 37/64 (57%), Positives = 41/64 (64%)
Frame = +1 / -1
Query: 397 PGDPMAGXXXXXXXXXXPGKGEIRACRQWRTGPGTSGPRR*AWRSPGTAQPAPRGWCRTF 576
PG P AG G+GEIRAC++WR G TS PRR*AW PGTA PA RGW RT
Sbjct: 348 PGAPRAGSRRYRSCAGTAGRGEIRACQRWRRGRRTSRPRR*AWSRPGTAPPARRGWSRTS 169
Query: 577 GSNA 588
GS+A
Sbjct: 168 GSSA 157
Score = 62.9 bits (131), Expect(2) = 1e-030
Identities = 28/57 (49%), Positives = 37/57 (64%)
Frame = +1 / -1
Query: 178 AATLSIHRFNMKPLNNSFITRVSAVFSHSSGGTCHSARRRTQRPAANGMPGRT*WGA 348
A++ IH FN+ P ++S + +HSSGGTCHSARR + + AANG RT* GA
Sbjct: 567 ASSFDIHCFNINP*SSSLLPEWPPFLNHSSGGTCHSARRSSLQLAANGTSVRT*GGA 397
Score = 39.1 bits (79), Expect(2) = 3e-033
Identities = 17/24 (70%), Positives = 21/24 (87%)
Frame = +2 / -2
Query: 536 VQPNQRRAVGVERSVVMLHEGLRY 607
VQP+QR AVGVER VV+L+E LR+
Sbjct: 209 VQPHQRGAVGVERLVVVLNERLRH 138
>gb|BQ763856.1|BQ763856 EBro03_SQ005_H17_R root, 3 week, waterlogged, cv Optic, EBro03
Hordeum vulgare subsp. vulgare cDNA clone
EBro03_SQ005_H17 5', mRNA sequence
Length = 684
Score = 271 bits (587), Expect = 2e-072
Identities = 110/145 (75%), Positives = 128/145 (88%)
Frame = -2 / +2
Query: 625 AMDPDAVAKAFVEHYYRTFDTNRAALVGLYQETSMLTFEGQKFQGPSAIAGKLGSLPFQA 446
AMDPD+V+KAFV+HYY+TFD+NRAALVGLYQ+ SMLTFEG+KF GP+AIAGKLGSLPFQ
Sbjct: 80 AMDPDSVSKAFVQHYYQTFDSNRAALVGLYQDGSMLTFEGEKFGGPAAIAGKLGSLPFQQ 259
Query: 445 CEHQIVTVDCQPSGPQGGMLVFVSGSIRTGPEEHPIKFSQAFHLLPAAGSFFVQNDMFRL 266
C+H+I TVDCQPSGPQGG+LVFVSG+I TGP EHP+KFSQ FHLLPA GSF+VQNDMFRL
Sbjct: 260 CQHKIDTVDCQPSGPQGGVLVFVSGTITTGPGEHPLKFSQMFHLLPAGGSFYVQNDMFRL 439
Query: 265 NYG*RQPILL**RNCLRVSC*NDEY 191
NYG* + L +N +R C*N+EY
Sbjct: 440 NYG*GRAATLAAKNLIRDLC*NNEY 514
Score = 240 bits (518), Expect = 8e-063
Identities = 106/150 (70%), Positives = 113/150 (75%)
Frame = +3 / -1
Query: 186 IKYSSFQHETLKQFLHHKSIGCL*P*FRRNMSFCTKKDPAAGSKWNAWENLMGCSSGPVR 365
I+YS FQH++L +F + *P*FRRNMSFCT K P AGSKWN ENL GCS GPV
Sbjct: 519 IRYSLFQHKSLIKFFAARVAALP*P*FRRNMSFCT*KLPPAGSKWNICENLRGCSPGPVV 340
Query: 366 MEPETKTSMPPWGPDGWQSTVTI*CSQAWKGRDPSLPAMADGPWNFWPSKVSMEVSWYSP 545
M PETKT PPWGP+GWQSTV+I C WKGRDPSLPAMA GP NF PSKVSME SWYSP
Sbjct: 339 MVPETKTRTPPWGPEGWQSTVSILCWHCWKGRDPSLPAMAAGPPNFSPSKVSMEPSWYSP 160
Query: 546 TSAARLVSNVR**CSTKAFATASGSIAITS 635
TSAARL SNV **C T AF T SGSIA S
Sbjct: 159 TSAARLESNVW**C*TNAFDTESGSIASPS 70
Score = 204 bits (441), Expect = 3e-052
Identities = 93/139 (66%), Positives = 103/139 (74%)
Frame = -1 / +1
Query: 602 EGLRGALLPNVRHQPRGAGWAVPGDLHAHLRGPEVPGPVRHCRQARISPFPGLRASDRHR 423
EG+R ALLP+VR QPR AG AVPG LHAHLRG EV P RH QARISP P + A DR+R
Sbjct: 103 EGVRSALLPDVRLQPRRAGGAVPGRLHAHLRGREVRRPRRHRWQARISPLPAVPAQDRYR 282
Query: 422 RLPAIGSPGRHARLRLRFHTHRPRGAPHQVLPGIPFAAGRWVLLRAE*HVPPELWLKTAD 243
RLPA+G+PGR RLRLR H HRPR AP QVL +PFAA LLRAE*HVPPELWL+
Sbjct: 283 RLPALGAPGRRPRLRLRHHHHRPRRAPPQVLTDVPFAASWRELLRAE*HVPPELWLRKGG 462
Query: 242 TLVMKELFKGFMLKR*ILN 186
KEL +GFMLK+*I N
Sbjct: 463 HSGSKELDQGFMLKQ*ISN 519
Score = 122 bits (262), Expect(2) = 3e-033
Identities = 62/94 (65%), Positives = 67/94 (71%)
Frame = +2 / -3
Query: 185 H*VFIVST*NP*TIPSSQEYRLSLAIVQAEHVILHEEGPSGRQQMECLGELDGVLLGAGA 364
H +FIVST* P + Q R SL IVQAEHVILH E PS QQME L EL+GVL GAG
Sbjct: 520 HSIFIVST*IPDQVLCCQSGRPSLTIVQAEHVILHVEAPSSWQQMEHL*ELEGVLAGAGG 341
Query: 365 YGTGDEDEHASLGTRWLAVDGDDLMLAGLERERS 466
G GDEDE A+LG R LAVDG DL+LA LE ERS
Sbjct: 340 DGAGDEDEDAALGPRGLAVDGIDLVLALLEGERS 239
Score = 90.4 bits (191), Expect(2) = 1e-030
Identities = 37/64 (57%), Positives = 41/64 (64%)
Frame = +1 / -2
Query: 397 PGDPMAGXXXXXXXXXXPGKGEIRACRQWRTGPGTSGPRR*AWRSPGTAQPAPRGWCRTF 576
PG P AG G+GEIRAC++WR G TS PRR*AW PGTA PA RGW RT
Sbjct: 308 PGAPRAGSRRYRSCAGTAGRGEIRACQRWRRGRRTSRPRR*AWSRPGTAPPARRGWSRTS 129
Query: 577 GSNA 588
GS+A
Sbjct: 128 GSSA 117
Score = 62.9 bits (131), Expect(2) = 1e-030
Identities = 28/57 (49%), Positives = 37/57 (64%)
Frame = +1 / -2
Query: 178 AATLSIHRFNMKPLNNSFITRVSAVFSHSSGGTCHSARRRTQRPAANGMPGRT*WGA 348
A++ IH FN+ P ++S + +HSSGGTCHSARR + + AANG RT* GA
Sbjct: 527 ASSFDIHCFNINP*SSSLLPEWPPFLNHSSGGTCHSARRSSLQLAANGTSVRT*GGA 357
Score = 39.1 bits (79), Expect(2) = 3e-033
Identities = 17/24 (70%), Positives = 21/24 (87%)
Frame = +2 / -3
Query: 536 VQPNQRRAVGVERSVVMLHEGLRY 607
VQP+QR AVGVER VV+L+E LR+
Sbjct: 169 VQPHQRGAVGVERLVVVLNERLRH 98
>gb|BU976730.1|BU976730 HA10D07r HA Hordeum vulgare subsp. vulgare cDNA clone HA10D07
5-PRIME, mRNA sequence
Length = 552
Score = 271 bits (587), Expect = 2e-072
Identities = 110/145 (75%), Positives = 128/145 (88%)
Frame = -2 / +3
Query: 625 AMDPDAVAKAFVEHYYRTFDTNRAALVGLYQETSMLTFEGQKFQGPSAIAGKLGSLPFQA 446
AMDPD+V+KAFV+HYY+TFD+NRAALVGLYQ+ SMLTFEG+KF GP+AIAGKLGSLPFQ
Sbjct: 105 AMDPDSVSKAFVQHYYQTFDSNRAALVGLYQDGSMLTFEGEKFGGPAAIAGKLGSLPFQQ 284
Query: 445 CEHQIVTVDCQPSGPQGGMLVFVSGSIRTGPEEHPIKFSQAFHLLPAAGSFFVQNDMFRL 266
C+H+I TVDCQPSGPQGG+LVFVSG+I TGP EHP+KFSQ FHLLPA GSF+VQNDMFRL
Sbjct: 285 CQHKIDTVDCQPSGPQGGVLVFVSGTITTGPGEHPLKFSQMFHLLPAGGSFYVQNDMFRL 464
Query: 265 NYG*RQPILL**RNCLRVSC*NDEY 191
NYG* + L +N +R C*N+EY
Sbjct: 465 NYG*GRAATLAAKNLIRDLC*NNEY 539
Score = 240 bits (518), Expect = 8e-063
Identities = 106/150 (70%), Positives = 113/150 (75%)
Frame = +3 / -3
Query: 186 IKYSSFQHETLKQFLHHKSIGCL*P*FRRNMSFCTKKDPAAGSKWNAWENLMGCSSGPVR 365
I+YS FQH++L +F + *P*FRRNMSFCT K P AGSKWN ENL GCS GPV
Sbjct: 544 IRYSLFQHKSLIKFFAARVAALP*P*FRRNMSFCT*KLPPAGSKWNICENLRGCSPGPVV 365
Query: 366 MEPETKTSMPPWGPDGWQSTVTI*CSQAWKGRDPSLPAMADGPWNFWPSKVSMEVSWYSP 545
M PETKT PPWGP+GWQSTV+I C WKGRDPSLPAMA GP NF PSKVSME SWYSP
Sbjct: 364 MVPETKTRTPPWGPEGWQSTVSILCWHCWKGRDPSLPAMAAGPPNFSPSKVSMEPSWYSP 185
Query: 546 TSAARLVSNVR**CSTKAFATASGSIAITS 635
TSAARL SNV **C T AF T SGSIA S
Sbjct: 184 TSAARLESNVW**C*TNAFDTESGSIASPS 95
Score = 204 bits (441), Expect = 3e-052
Identities = 93/139 (66%), Positives = 103/139 (74%)
Frame = -1 / +2
Query: 602 EGLRGALLPNVRHQPRGAGWAVPGDLHAHLRGPEVPGPVRHCRQARISPFPGLRASDRHR 423
EG+R ALLP+VR QPR AG AVPG LHAHLRG EV P RH QARISP P + A DR+R
Sbjct: 128 EGVRSALLPDVRLQPRRAGGAVPGRLHAHLRGREVRRPRRHRWQARISPLPAVPAQDRYR 307
Query: 422 RLPAIGSPGRHARLRLRFHTHRPRGAPHQVLPGIPFAAGRWVLLRAE*HVPPELWLKTAD 243
RLPA+G+PGR RLRLR H HRPR AP QVL +PFAA LLRAE*HVPPELWL+
Sbjct: 308 RLPALGAPGRRPRLRLRHHHHRPRRAPPQVLTDVPFAASWRELLRAE*HVPPELWLRKGG 487
Query: 242 TLVMKELFKGFMLKR*ILN 186
KEL +GFMLK+*I N
Sbjct: 488 HSGSKELDQGFMLKQ*ISN 544
Score = 122 bits (262), Expect(2) = 3e-033
Identities = 62/94 (65%), Positives = 67/94 (71%)
Frame = +2 / -2
Query: 185 H*VFIVST*NP*TIPSSQEYRLSLAIVQAEHVILHEEGPSGRQQMECLGELDGVLLGAGA 364
H +FIVST* P + Q R SL IVQAEHVILH E PS QQME L EL+GVL GAG
Sbjct: 545 HSIFIVST*IPDQVLCCQSGRPSLTIVQAEHVILHVEAPSSWQQMEHL*ELEGVLAGAGG 366
Query: 365 YGTGDEDEHASLGTRWLAVDGDDLMLAGLERERS 466
G GDEDE A+LG R LAVDG DL+LA LE ERS
Sbjct: 365 DGAGDEDEDAALGPRGLAVDGIDLVLALLEGERS 264
Score = 90.4 bits (191), Expect(2) = 1e-030
Identities = 37/64 (57%), Positives = 41/64 (64%)
Frame = +1 / -1
Query: 397 PGDPMAGXXXXXXXXXXPGKGEIRACRQWRTGPGTSGPRR*AWRSPGTAQPAPRGWCRTF 576
PG P AG G+GEIRAC++WR G TS PRR*AW PGTA PA RGW RT
Sbjct: 333 PGAPRAGSRRYRSCAGTAGRGEIRACQRWRRGRRTSRPRR*AWSRPGTAPPARRGWSRTS 154
Query: 577 GSNA 588
GS+A
Sbjct: 153 GSSA 142
Score = 62.9 bits (131), Expect(2) = 1e-030
Identities = 28/57 (49%), Positives = 37/57 (64%)
Frame = +1 / -1
Query: 178 AATLSIHRFNMKPLNNSFITRVSAVFSHSSGGTCHSARRRTQRPAANGMPGRT*WGA 348
A++ IH FN+ P ++S + +HSSGGTCHSARR + + AANG RT* GA
Sbjct: 552 ASSFDIHCFNINP*SSSLLPEWPPFLNHSSGGTCHSARRSSLQLAANGTSVRT*GGA 382
Score = 39.1 bits (79), Expect(2) = 3e-033
Identities = 17/24 (70%), Positives = 21/24 (87%)
Frame = +2 / -2
Query: 536 VQPNQRRAVGVERSVVMLHEGLRY 607
VQP+QR AVGVER VV+L+E LR+
Sbjct: 194 VQPHQRGAVGVERLVVVLNERLRH 123
>gb|BU977881.1|BU977881 HA12D08r HA Hordeum vulgare subsp. vulgare cDNA clone HA12D08
5-PRIME, mRNA sequence
Length = 529
Score = 271 bits (587), Expect = 2e-072
Identities = 110/145 (75%), Positives = 128/145 (88%)
Frame = -2 / +1
Query: 625 AMDPDAVAKAFVEHYYRTFDTNRAALVGLYQETSMLTFEGQKFQGPSAIAGKLGSLPFQA 446
AMDPD+V+KAFV+HYY+TFD+NRAALVGLYQ+ SMLTFEG+KF GP+AIAGKLGSLPFQ
Sbjct: 79 AMDPDSVSKAFVQHYYQTFDSNRAALVGLYQDGSMLTFEGEKFGGPAAIAGKLGSLPFQQ 258
Query: 445 CEHQIVTVDCQPSGPQGGMLVFVSGSIRTGPEEHPIKFSQAFHLLPAAGSFFVQNDMFRL 266
C+H+I TVDCQPSGPQGG+LVFVSG+I TGP EHP+KFSQ FHLLPA GSF+VQNDMFRL
Sbjct: 259 CQHKIDTVDCQPSGPQGGVLVFVSGTITTGPGEHPLKFSQMFHLLPAGGSFYVQNDMFRL 438
Query: 265 NYG*RQPILL**RNCLRVSC*NDEY 191
NYG* + L +N +R C*N+EY
Sbjct: 439 NYG*GRAATLAAKNLIRDLC*NNEY 513
Score = 240 bits (518), Expect = 8e-063
Identities = 106/150 (70%), Positives = 113/150 (75%)
Frame = +3 / -3
Query: 186 IKYSSFQHETLKQFLHHKSIGCL*P*FRRNMSFCTKKDPAAGSKWNAWENLMGCSSGPVR 365
I+YS FQH++L +F + *P*FRRNMSFCT K P AGSKWN ENL GCS GPV
Sbjct: 518 IRYSLFQHKSLIKFFAARVAALP*P*FRRNMSFCT*KLPPAGSKWNICENLRGCSPGPVV 339
Query: 366 MEPETKTSMPPWGPDGWQSTVTI*CSQAWKGRDPSLPAMADGPWNFWPSKVSMEVSWYSP 545
M PETKT PPWGP+GWQSTV+I C WKGRDPSLPAMA GP NF PSKVSME SWYSP
Sbjct: 338 MVPETKTRTPPWGPEGWQSTVSILCWHCWKGRDPSLPAMAAGPPNFSPSKVSMEPSWYSP 159
Query: 546 TSAARLVSNVR**CSTKAFATASGSIAITS 635
TSAARL SNV **C T AF T SGSIA S
Sbjct: 158 TSAARLESNVW**C*TNAFDTESGSIASPS 69
Score = 204 bits (441), Expect = 3e-052
Identities = 93/139 (66%), Positives = 103/139 (74%)
Frame = -1 / +3
Query: 602 EGLRGALLPNVRHQPRGAGWAVPGDLHAHLRGPEVPGPVRHCRQARISPFPGLRASDRHR 423
EG+R ALLP+VR QPR AG AVPG LHAHLRG EV P RH QARISP P + A DR+R
Sbjct: 102 EGVRSALLPDVRLQPRRAGGAVPGRLHAHLRGREVRRPRRHRWQARISPLPAVPAQDRYR 281
Query: 422 RLPAIGSPGRHARLRLRFHTHRPRGAPHQVLPGIPFAAGRWVLLRAE*HVPPELWLKTAD 243
RLPA+G+PGR RLRLR H HRPR AP QVL +PFAA LLRAE*HVPPELWL+
Sbjct: 282 RLPALGAPGRRPRLRLRHHHHRPRRAPPQVLTDVPFAASWRELLRAE*HVPPELWLRKGG 461
Query: 242 TLVMKELFKGFMLKR*ILN 186
KEL +GFMLK+*I N
Sbjct: 462 HSGSKELDQGFMLKQ*ISN 518
Score = 122 bits (262), Expect(2) = 3e-033
Identities = 62/94 (65%), Positives = 67/94 (71%)
Frame = +2 / -2
Query: 185 H*VFIVST*NP*TIPSSQEYRLSLAIVQAEHVILHEEGPSGRQQMECLGELDGVLLGAGA 364
H +FIVST* P + Q R SL IVQAEHVILH E PS QQME L EL+GVL GAG
Sbjct: 519 HSIFIVST*IPDQVLCCQSGRPSLTIVQAEHVILHVEAPSSWQQMEHL*ELEGVLAGAGG 340
Query: 365 YGTGDEDEHASLGTRWLAVDGDDLMLAGLERERS 466
G GDEDE A+LG R LAVDG DL+LA LE ERS
Sbjct: 339 DGAGDEDEDAALGPRGLAVDGIDLVLALLEGERS 238
Score = 90.4 bits (191), Expect(2) = 1e-030
Identities = 37/64 (57%), Positives = 41/64 (64%)
Frame = +1 / -1
Query: 397 PGDPMAGXXXXXXXXXXPGKGEIRACRQWRTGPGTSGPRR*AWRSPGTAQPAPRGWCRTF 576
PG P AG G+GEIRAC++WR G TS PRR*AW PGTA PA RGW RT
Sbjct: 307 PGAPRAGSRRYRSCAGTAGRGEIRACQRWRRGRRTSRPRR*AWSRPGTAPPARRGWSRTS 128
Query: 577 GSNA 588
GS+A
Sbjct: 127 GSSA 116
Score = 62.9 bits (131), Expect(2) = 1e-030
Identities = 28/57 (49%), Positives = 37/57 (64%)
Frame = +1 / -1
Query: 178 AATLSIHRFNMKPLNNSFITRVSAVFSHSSGGTCHSARRRTQRPAANGMPGRT*WGA 348
A++ IH FN+ P ++S + +HSSGGTCHSARR + + AANG RT* GA
Sbjct: 526 ASSFDIHCFNINP*SSSLLPEWPPFLNHSSGGTCHSARRSSLQLAANGTSVRT*GGA 356
Score = 39.1 bits (79), Expect(2) = 3e-033
Identities = 17/24 (70%), Positives = 21/24 (87%)
Frame = +2 / -2
Query: 536 VQPNQRRAVGVERSVVMLHEGLRY 607
VQP+QR AVGVER VV+L+E LR+
Sbjct: 168 VQPHQRGAVGVERLVVVLNERLRH 97
>gb|BU978542.1|BU978542 HA13I17r HA Hordeum vulgare subsp. vulgare cDNA clone HA13I17
5-PRIME, mRNA sequence
Length = 525
Score = 271 bits (587), Expect = 2e-072
Identities = 110/145 (75%), Positives = 128/145 (88%)
Frame = -2 / +1
Query: 625 AMDPDAVAKAFVEHYYRTFDTNRAALVGLYQETSMLTFEGQKFQGPSAIAGKLGSLPFQA 446
AMDPD+V+KAFV+HYY+TFD+NRAALVGLYQ+ SMLTFEG+KF GP+AIAGKLGSLPFQ
Sbjct: 76 AMDPDSVSKAFVQHYYQTFDSNRAALVGLYQDGSMLTFEGEKFGGPAAIAGKLGSLPFQQ 255
Query: 445 CEHQIVTVDCQPSGPQGGMLVFVSGSIRTGPEEHPIKFSQAFHLLPAAGSFFVQNDMFRL 266
C+H+I TVDCQPSGPQGG+LVFVSG+I TGP EHP+KFSQ FHLLPA GSF+VQNDMFRL
Sbjct: 256 CQHKIDTVDCQPSGPQGGVLVFVSGTITTGPGEHPLKFSQMFHLLPAGGSFYVQNDMFRL 435
Query: 265 NYG*RQPILL**RNCLRVSC*NDEY 191
NYG* + L +N +R C*N+EY
Sbjct: 436 NYG*GRAATLAAKNLIRDLC*NNEY 510
Score = 240 bits (518), Expect = 8e-063
Identities = 106/150 (70%), Positives = 113/150 (75%)
Frame = +3 / -2
Query: 186 IKYSSFQHETLKQFLHHKSIGCL*P*FRRNMSFCTKKDPAAGSKWNAWENLMGCSSGPVR 365
I+YS FQH++L +F + *P*FRRNMSFCT K P AGSKWN ENL GCS GPV
Sbjct: 515 IRYSLFQHKSLIKFFAARVAALP*P*FRRNMSFCT*KLPPAGSKWNICENLRGCSPGPVV 336
Query: 366 MEPETKTSMPPWGPDGWQSTVTI*CSQAWKGRDPSLPAMADGPWNFWPSKVSMEVSWYSP 545
M PETKT PPWGP+GWQSTV+I C WKGRDPSLPAMA GP NF PSKVSME SWYSP
Sbjct: 335 MVPETKTRTPPWGPEGWQSTVSILCWHCWKGRDPSLPAMAAGPPNFSPSKVSMEPSWYSP 156
Query: 546 TSAARLVSNVR**CSTKAFATASGSIAITS 635
TSAARL SNV **C T AF T SGSIA S
Sbjct: 155 TSAARLESNVW**C*TNAFDTESGSIASPS 66
Score = 204 bits (441), Expect = 3e-052
Identities = 93/139 (66%), Positives = 103/139 (74%)
Frame = -1 / +3
Query: 602 EGLRGALLPNVRHQPRGAGWAVPGDLHAHLRGPEVPGPVRHCRQARISPFPGLRASDRHR 423
EG+R ALLP+VR QPR AG AVPG LHAHLRG EV P RH QARISP P + A DR+R
Sbjct: 99 EGVRSALLPDVRLQPRRAGGAVPGRLHAHLRGREVRRPRRHRWQARISPLPAVPAQDRYR 278
Query: 422 RLPAIGSPGRHARLRLRFHTHRPRGAPHQVLPGIPFAAGRWVLLRAE*HVPPELWLKTAD 243
RLPA+G+PGR RLRLR H HRPR AP QVL +PFAA LLRAE*HVPPELWL+
Sbjct: 279 RLPALGAPGRRPRLRLRHHHHRPRRAPPQVLTDVPFAASWRELLRAE*HVPPELWLRKGG 458
Query: 242 TLVMKELFKGFMLKR*ILN 186
KEL +GFMLK+*I N
Sbjct: 459 HSGSKELDQGFMLKQ*ISN 515
Score = 122 bits (262), Expect(2) = 3e-033
Identities = 62/94 (65%), Positives = 67/94 (71%)
Frame = +2 / -1
Query: 185 H*VFIVST*NP*TIPSSQEYRLSLAIVQAEHVILHEEGPSGRQQMECLGELDGVLLGAGA 364
H +FIVST* P + Q R SL IVQAEHVILH E PS QQME L EL+GVL GAG
Sbjct: 516 HSIFIVST*IPDQVLCCQSGRPSLTIVQAEHVILHVEAPSSWQQMEHL*ELEGVLAGAGG 337
Query: 365 YGTGDEDEHASLGTRWLAVDGDDLMLAGLERERS 466
G GDEDE A+LG R LAVDG DL+LA LE ERS
Sbjct: 336 DGAGDEDEDAALGPRGLAVDGIDLVLALLEGERS 235
Score = 90.4 bits (191), Expect(2) = 1e-030
Identities = 37/64 (57%), Positives = 41/64 (64%)
Frame = +1 / -3
Query: 397 PGDPMAGXXXXXXXXXXPGKGEIRACRQWRTGPGTSGPRR*AWRSPGTAQPAPRGWCRTF 576
PG P AG G+GEIRAC++WR G TS PRR*AW PGTA PA RGW RT
Sbjct: 304 PGAPRAGSRRYRSCAGTAGRGEIRACQRWRRGRRTSRPRR*AWSRPGTAPPARRGWSRTS 125
Query: 577 GSNA 588
GS+A
Sbjct: 124 GSSA 113
Score = 62.9 bits (131), Expect(2) = 1e-030
Identities = 28/57 (49%), Positives = 37/57 (64%)
Frame = +1 / -3
Query: 178 AATLSIHRFNMKPLNNSFITRVSAVFSHSSGGTCHSARRRTQRPAANGMPGRT*WGA 348
A++ IH FN+ P ++S + +HSSGGTCHSARR + + AANG RT* GA
Sbjct: 523 ASSFDIHCFNINP*SSSLLPEWPPFLNHSSGGTCHSARRSSLQLAANGTSVRT*GGA 353
Score = 39.1 bits (79), Expect(2) = 3e-033
Identities = 17/24 (70%), Positives = 21/24 (87%)
Frame = +2 / -1
Query: 536 VQPNQRRAVGVERSVVMLHEGLRY 607
VQP+QR AVGVER VV+L+E LR+
Sbjct: 165 VQPHQRGAVGVERLVVVLNERLRH 94
>gb|BU983417.1|BU983417 HA29K18r HA Hordeum vulgare subsp. vulgare cDNA clone HA29K18
5-PRIME, mRNA sequence
Length = 575
Score = 271 bits (587), Expect = 2e-072
Identities = 110/145 (75%), Positives = 128/145 (88%)
Frame = -2 / +1
Query: 625 AMDPDAVAKAFVEHYYRTFDTNRAALVGLYQETSMLTFEGQKFQGPSAIAGKLGSLPFQA 446
AMDPD+V+KAFV+HYY+TFD+NRAALVGLYQ+ SMLTFEG+KF GP+AIAGKLGSLPFQ
Sbjct: 46 AMDPDSVSKAFVQHYYQTFDSNRAALVGLYQDGSMLTFEGEKFGGPAAIAGKLGSLPFQQ 225
Query: 445 CEHQIVTVDCQPSGPQGGMLVFVSGSIRTGPEEHPIKFSQAFHLLPAAGSFFVQNDMFRL 266
C+H+I TVDCQPSGPQGG+LVFVSG+I TGP EHP+KFSQ FHLLPA GSF+VQNDMFRL
Sbjct: 226 CQHKIDTVDCQPSGPQGGVLVFVSGTITTGPGEHPLKFSQMFHLLPAGGSFYVQNDMFRL 405
Query: 265 NYG*RQPILL**RNCLRVSC*NDEY 191
NYG* + L +N +R C*N+EY
Sbjct: 406 NYG*GRAATLAAKNLIRDLC*NNEY 480
Score = 240 bits (518), Expect = 8e-063
Identities = 106/150 (70%), Positives = 113/150 (75%)
Frame = +3 / -1
Query: 186 IKYSSFQHETLKQFLHHKSIGCL*P*FRRNMSFCTKKDPAAGSKWNAWENLMGCSSGPVR 365
I+YS FQH++L +F + *P*FRRNMSFCT K P AGSKWN ENL GCS GPV
Sbjct: 485 IRYSLFQHKSLIKFFAARVAALP*P*FRRNMSFCT*KLPPAGSKWNICENLRGCSPGPVV 306
Query: 366 MEPETKTSMPPWGPDGWQSTVTI*CSQAWKGRDPSLPAMADGPWNFWPSKVSMEVSWYSP 545
M PETKT PPWGP+GWQSTV+I C WKGRDPSLPAMA GP NF PSKVSME SWYSP
Sbjct: 305 MVPETKTRTPPWGPEGWQSTVSILCWHCWKGRDPSLPAMAAGPPNFSPSKVSMEPSWYSP 126
Query: 546 TSAARLVSNVR**CSTKAFATASGSIAITS 635
TSAARL SNV **C T AF T SGSIA S
Sbjct: 125 TSAARLESNVW**C*TNAFDTESGSIASPS 36
Score = 204 bits (441), Expect = 3e-052
Identities = 93/139 (66%), Positives = 103/139 (74%)
Frame = -1 / +3
Query: 602 EGLRGALLPNVRHQPRGAGWAVPGDLHAHLRGPEVPGPVRHCRQARISPFPGLRASDRHR 423
EG+R ALLP+VR QPR AG AVPG LHAHLRG EV P RH QARISP P + A DR+R
Sbjct: 69 EGVRSALLPDVRLQPRRAGGAVPGRLHAHLRGREVRRPRRHRWQARISPLPAVPAQDRYR 248
Query: 422 RLPAIGSPGRHARLRLRFHTHRPRGAPHQVLPGIPFAAGRWVLLRAE*HVPPELWLKTAD 243
RLPA+G+PGR RLRLR H HRPR AP QVL +PFAA LLRAE*HVPPELWL+
Sbjct: 249 RLPALGAPGRRPRLRLRHHHHRPRRAPPQVLTDVPFAASWRELLRAE*HVPPELWLRKGG 428
Query: 242 TLVMKELFKGFMLKR*ILN 186
KEL +GFMLK+*I N
Sbjct: 429 HSGSKELDQGFMLKQ*ISN 485
Score = 122 bits (262), Expect(2) = 3e-033
Identities = 62/94 (65%), Positives = 67/94 (71%)
Frame = +2 / -3
Query: 185 H*VFIVST*NP*TIPSSQEYRLSLAIVQAEHVILHEEGPSGRQQMECLGELDGVLLGAGA 364
H +FIVST* P + Q R SL IVQAEHVILH E PS QQME L EL+GVL GAG
Sbjct: 486 HSIFIVST*IPDQVLCCQSGRPSLTIVQAEHVILHVEAPSSWQQMEHL*ELEGVLAGAGG 307
Query: 365 YGTGDEDEHASLGTRWLAVDGDDLMLAGLERERS 466
G GDEDE A+LG R LAVDG DL+LA LE ERS
Sbjct: 306 DGAGDEDEDAALGPRGLAVDGIDLVLALLEGERS 205
Score = 90.4 bits (191), Expect(2) = 1e-030
Identities = 37/64 (57%), Positives = 41/64 (64%)
Frame = +1 / -2
Query: 397 PGDPMAGXXXXXXXXXXPGKGEIRACRQWRTGPGTSGPRR*AWRSPGTAQPAPRGWCRTF 576
PG P AG G+GEIRAC++WR G TS PRR*AW PGTA PA RGW RT
Sbjct: 274 PGAPRAGSRRYRSCAGTAGRGEIRACQRWRRGRRTSRPRR*AWSRPGTAPPARRGWSRTS 95
Query: 577 GSNA 588
GS+A
Sbjct: 94 GSSA 83
Score = 62.9 bits (131), Expect(2) = 1e-030
Identities = 28/57 (49%), Positives = 37/57 (64%)
Frame = +1 / -2
Query: 178 AATLSIHRFNMKPLNNSFITRVSAVFSHSSGGTCHSARRRTQRPAANGMPGRT*WGA 348
A++ IH FN+ P ++S + +HSSGGTCHSARR + + AANG RT* GA
Sbjct: 493 ASSFDIHCFNINP*SSSLLPEWPPFLNHSSGGTCHSARRSSLQLAANGTSVRT*GGA 323
Score = 39.1 bits (79), Expect(2) = 3e-033
Identities = 17/24 (70%), Positives = 21/24 (87%)
Frame = +2 / -3
Query: 536 VQPNQRRAVGVERSVVMLHEGLRY 607
VQP+QR AVGVER VV+L+E LR+
Sbjct: 135 VQPHQRGAVGVERLVVVLNERLRH 64
>gb|BU984022.1|BU984022 HA31M02r HA Hordeum vulgare subsp. vulgare cDNA clone HA31M02
5-PRIME, mRNA sequence
Length = 574
Score = 271 bits (587), Expect = 2e-072
Identities = 110/145 (75%), Positives = 128/145 (88%)
Frame = -2 / +2
Query: 625 AMDPDAVAKAFVEHYYRTFDTNRAALVGLYQETSMLTFEGQKFQGPSAIAGKLGSLPFQA 446
AMDPD+V+KAFV+HYY+TFD+NRAALVGLYQ+ SMLTFEG+KF GP+AIAGKLGSLPFQ
Sbjct: 125 AMDPDSVSKAFVQHYYQTFDSNRAALVGLYQDGSMLTFEGEKFGGPAAIAGKLGSLPFQQ 304
Query: 445 CEHQIVTVDCQPSGPQGGMLVFVSGSIRTGPEEHPIKFSQAFHLLPAAGSFFVQNDMFRL 266
C+H+I TVDCQPSGPQGG+LVFVSG+I TGP EHP+KFSQ FHLLPA GSF+VQNDMFRL
Sbjct: 305 CQHKIDTVDCQPSGPQGGVLVFVSGTITTGPGEHPLKFSQMFHLLPAGGSFYVQNDMFRL 484
Query: 265 NYG*RQPILL**RNCLRVSC*NDEY 191
NYG* + L +N +R C*N+EY
Sbjct: 485 NYG*GRAATLAAKNLIRDLC*NNEY 559
Score = 240 bits (518), Expect = 8e-063
Identities = 106/150 (70%), Positives = 113/150 (75%)
Frame = +3 / -2
Query: 186 IKYSSFQHETLKQFLHHKSIGCL*P*FRRNMSFCTKKDPAAGSKWNAWENLMGCSSGPVR 365
I+YS FQH++L +F + *P*FRRNMSFCT K P AGSKWN ENL GCS GPV
Sbjct: 564 IRYSLFQHKSLIKFFAARVAALP*P*FRRNMSFCT*KLPPAGSKWNICENLRGCSPGPVV 385
Query: 366 MEPETKTSMPPWGPDGWQSTVTI*CSQAWKGRDPSLPAMADGPWNFWPSKVSMEVSWYSP 545
M PETKT PPWGP+GWQSTV+I C WKGRDPSLPAMA GP NF PSKVSME SWYSP
Sbjct: 384 MVPETKTRTPPWGPEGWQSTVSILCWHCWKGRDPSLPAMAAGPPNFSPSKVSMEPSWYSP 205
Query: 546 TSAARLVSNVR**CSTKAFATASGSIAITS 635
TSAARL SNV **C T AF T SGSIA S
Sbjct: 204 TSAARLESNVW**C*TNAFDTESGSIASPS 115
Score = 204 bits (441), Expect = 3e-052
Identities = 93/139 (66%), Positives = 103/139 (74%)
Frame = -1 / +1
Query: 602 EGLRGALLPNVRHQPRGAGWAVPGDLHAHLRGPEVPGPVRHCRQARISPFPGLRASDRHR 423
EG+R ALLP+VR QPR AG AVPG LHAHLRG EV P RH QARISP P + A DR+R
Sbjct: 148 EGVRSALLPDVRLQPRRAGGAVPGRLHAHLRGREVRRPRRHRWQARISPLPAVPAQDRYR 327
Query: 422 RLPAIGSPGRHARLRLRFHTHRPRGAPHQVLPGIPFAAGRWVLLRAE*HVPPELWLKTAD 243
RLPA+G+PGR RLRLR H HRPR AP QVL +PFAA LLRAE*HVPPELWL+
Sbjct: 328 RLPALGAPGRRPRLRLRHHHHRPRRAPPQVLTDVPFAASWRELLRAE*HVPPELWLRKGG 507
Query: 242 TLVMKELFKGFMLKR*ILN 186
KEL +GFMLK+*I N
Sbjct: 508 HSGSKELDQGFMLKQ*ISN 564
Score = 122 bits (262), Expect(2) = 3e-033
Identities = 62/94 (65%), Positives = 67/94 (71%)
Frame = +2 / -1
Query: 185 H*VFIVST*NP*TIPSSQEYRLSLAIVQAEHVILHEEGPSGRQQMECLGELDGVLLGAGA 364
H +FIVST* P + Q R SL IVQAEHVILH E PS QQME L EL+GVL GAG
Sbjct: 565 HSIFIVST*IPDQVLCCQSGRPSLTIVQAEHVILHVEAPSSWQQMEHL*ELEGVLAGAGG 386
Query: 365 YGTGDEDEHASLGTRWLAVDGDDLMLAGLERERS 466
G GDEDE A+LG R LAVDG DL+LA LE ERS
Sbjct: 385 DGAGDEDEDAALGPRGLAVDGIDLVLALLEGERS 284
Score = 90.4 bits (191), Expect(2) = 1e-030
Identities = 37/64 (57%), Positives = 41/64 (64%)
Frame = +1 / -3
Query: 397 PGDPMAGXXXXXXXXXXPGKGEIRACRQWRTGPGTSGPRR*AWRSPGTAQPAPRGWCRTF 576
PG P AG G+GEIRAC++WR G TS PRR*AW PGTA PA RGW RT
Sbjct: 353 PGAPRAGSRRYRSCAGTAGRGEIRACQRWRRGRRTSRPRR*AWSRPGTAPPARRGWSRTS 174
Query: 577 GSNA 588
GS+A
Sbjct: 173 GSSA 162
Score = 62.9 bits (131), Expect(2) = 1e-030
Identities = 28/57 (49%), Positives = 37/57 (64%)
Frame = +1 / -3
Query: 178 AATLSIHRFNMKPLNNSFITRVSAVFSHSSGGTCHSARRRTQRPAANGMPGRT*WGA 348
A++ IH FN+ P ++S + +HSSGGTCHSARR + + AANG RT* GA
Sbjct: 572 ASSFDIHCFNINP*SSSLLPEWPPFLNHSSGGTCHSARRSSLQLAANGTSVRT*GGA 402
Score = 39.1 bits (79), Expect(2) = 3e-033
Identities = 17/24 (70%), Positives = 21/24 (87%)
Frame = +2 / -1
Query: 536 VQPNQRRAVGVERSVVMLHEGLRY 607
VQP+QR AVGVER VV+L+E LR+
Sbjct: 214 VQPHQRGAVGVERLVVVLNERLRH 143
>gb|BU997399.1|BU997399 HI07N23r HI Hordeum vulgare subsp. vulgare cDNA clone HI07N23
5-PRIME, mRNA sequence
Length = 624
Score = 271 bits (587), Expect = 2e-072
Identities = 110/145 (75%), Positives = 128/145 (88%)
Frame = -2 / +2
Query: 625 AMDPDAVAKAFVEHYYRTFDTNRAALVGLYQETSMLTFEGQKFQGPSAIAGKLGSLPFQA 446
AMDPD+V+KAFV+HYY+TFD+NRAALVGLYQ+ SMLTFEG+KF GP+AIAGKLGSLPFQ
Sbjct: 83 AMDPDSVSKAFVQHYYQTFDSNRAALVGLYQDGSMLTFEGEKFGGPAAIAGKLGSLPFQQ 262
Query: 445 CEHQIVTVDCQPSGPQGGMLVFVSGSIRTGPEEHPIKFSQAFHLLPAAGSFFVQNDMFRL 266
C+H+I TVDCQPSGPQGG+LVFVSG+I TGP EHP+KFSQ FHLLPA GSF+VQNDMFRL
Sbjct: 263 CQHKIDTVDCQPSGPQGGVLVFVSGTITTGPGEHPLKFSQMFHLLPAGGSFYVQNDMFRL 442
Query: 265 NYG*RQPILL**RNCLRVSC*NDEY 191
NYG* + L +N +R C*N+EY
Sbjct: 443 NYG*GRAATLAAKNLIRDLC*NNEY 517
Score = 240 bits (518), Expect = 8e-063
Identities = 106/150 (70%), Positives = 113/150 (75%)
Frame = +3 / -1
Query: 186 IKYSSFQHETLKQFLHHKSIGCL*P*FRRNMSFCTKKDPAAGSKWNAWENLMGCSSGPVR 365
I+YS FQH++L +F + *P*FRRNMSFCT K P AGSKWN ENL GCS GPV
Sbjct: 522 IRYSLFQHKSLIKFFAARVAALP*P*FRRNMSFCT*KLPPAGSKWNICENLRGCSPGPVV 343
Query: 366 MEPETKTSMPPWGPDGWQSTVTI*CSQAWKGRDPSLPAMADGPWNFWPSKVSMEVSWYSP 545
M PETKT PPWGP+GWQSTV+I C WKGRDPSLPAMA GP NF PSKVSME SWYSP
Sbjct: 342 MVPETKTRTPPWGPEGWQSTVSILCWHCWKGRDPSLPAMAAGPPNFSPSKVSMEPSWYSP 163
Query: 546 TSAARLVSNVR**CSTKAFATASGSIAITS 635
TSAARL SNV **C T AF T SGSIA S
Sbjct: 162 TSAARLESNVW**C*TNAFDTESGSIASPS 73
Score = 204 bits (441), Expect = 3e-052
Identities = 93/139 (66%), Positives = 103/139 (74%)
Frame = -1 / +1
Query: 602 EGLRGALLPNVRHQPRGAGWAVPGDLHAHLRGPEVPGPVRHCRQARISPFPGLRASDRHR 423
EG+R ALLP+VR QPR AG AVPG LHAHLRG EV P RH QARISP P + A DR+R
Sbjct: 106 EGVRSALLPDVRLQPRRAGGAVPGRLHAHLRGREVRRPRRHRWQARISPLPAVPAQDRYR 285
Query: 422 RLPAIGSPGRHARLRLRFHTHRPRGAPHQVLPGIPFAAGRWVLLRAE*HVPPELWLKTAD 243
RLPA+G+PGR RLRLR H HRPR AP QVL +PFAA LLRAE*HVPPELWL+
Sbjct: 286 RLPALGAPGRRPRLRLRHHHHRPRRAPPQVLTDVPFAASWRELLRAE*HVPPELWLRKGG 465
Query: 242 TLVMKELFKGFMLKR*ILN 186
KEL +GFMLK+*I N
Sbjct: 466 HSGSKELDQGFMLKQ*ISN 522
Score = 122 bits (262), Expect(2) = 3e-033
Identities = 62/94 (65%), Positives = 67/94 (71%)
Frame = +2 / -3
Query: 185 H*VFIVST*NP*TIPSSQEYRLSLAIVQAEHVILHEEGPSGRQQMECLGELDGVLLGAGA 364
H +FIVST* P + Q R SL IVQAEHVILH E PS QQME L EL+GVL GAG
Sbjct: 523 HSIFIVST*IPDQVLCCQSGRPSLTIVQAEHVILHVEAPSSWQQMEHL*ELEGVLAGAGG 344
Query: 365 YGTGDEDEHASLGTRWLAVDGDDLMLAGLERERS 466
G GDEDE A+LG R LAVDG DL+LA LE ERS
Sbjct: 343 DGAGDEDEDAALGPRGLAVDGIDLVLALLEGERS 242
Score = 90.4 bits (191), Expect(2) = 1e-030
Identities = 37/64 (57%), Positives = 41/64 (64%)
Frame = +1 / -2
Query: 397 PGDPMAGXXXXXXXXXXPGKGEIRACRQWRTGPGTSGPRR*AWRSPGTAQPAPRGWCRTF 576
PG P AG G+GEIRAC++WR G TS PRR*AW PGTA PA RGW RT
Sbjct: 311 PGAPRAGSRRYRSCAGTAGRGEIRACQRWRRGRRTSRPRR*AWSRPGTAPPARRGWSRTS 132
Query: 577 GSNA 588
GS+A
Sbjct: 131 GSSA 120
Score = 62.9 bits (131), Expect(2) = 1e-030
Identities = 28/57 (49%), Positives = 37/57 (64%)
Frame = +1 / -2
Query: 178 AATLSIHRFNMKPLNNSFITRVSAVFSHSSGGTCHSARRRTQRPAANGMPGRT*WGA 348
A++ IH FN+ P ++S + +HSSGGTCHSARR + + AANG RT* GA
Sbjct: 530 ASSFDIHCFNINP*SSSLLPEWPPFLNHSSGGTCHSARRSSLQLAANGTSVRT*GGA 360
Score = 39.1 bits (79), Expect(2) = 3e-033
Identities = 17/24 (70%), Positives = 21/24 (87%)
Frame = +2 / -3
Query: 536 VQPNQRRAVGVERSVVMLHEGLRY 607
VQP+QR AVGVER VV+L+E LR+
Sbjct: 172 VQPHQRGAVGVERLVVVLNERLRH 101
>gb|BU998875.1|BU998875 HI12G19r HI Hordeum vulgare subsp. vulgare cDNA clone HI12G19
5-PRIME, mRNA sequence
Length = 574
Score = 271 bits (587), Expect = 2e-072
Identities = 110/145 (75%), Positives = 128/145 (88%)
Frame = -2 / +1
Query: 625 AMDPDAVAKAFVEHYYRTFDTNRAALVGLYQETSMLTFEGQKFQGPSAIAGKLGSLPFQA 446
AMDPD+V+KAFV+HYY+TFD+NRAALVGLYQ+ SMLTFEG+KF GP+AIAGKLGSLPFQ
Sbjct: 31 AMDPDSVSKAFVQHYYQTFDSNRAALVGLYQDGSMLTFEGEKFGGPAAIAGKLGSLPFQQ 210
Query: 445 CEHQIVTVDCQPSGPQGGMLVFVSGSIRTGPEEHPIKFSQAFHLLPAAGSFFVQNDMFRL 266
C+H+I TVDCQPSGPQGG+LVFVSG+I TGP EHP+KFSQ FHLLPA GSF+VQNDMFRL
Sbjct: 211 CQHKIDTVDCQPSGPQGGVLVFVSGTITTGPGEHPLKFSQMFHLLPAGGSFYVQNDMFRL 390
Query: 265 NYG*RQPILL**RNCLRVSC*NDEY 191
NYG* + L +N +R C*N+EY
Sbjct: 391 NYG*GRAATLAAKNLIRDLC*NNEY 465
Score = 240 bits (518), Expect = 8e-063
Identities = 106/150 (70%), Positives = 113/150 (75%)
Frame = +3 / -3
Query: 186 IKYSSFQHETLKQFLHHKSIGCL*P*FRRNMSFCTKKDPAAGSKWNAWENLMGCSSGPVR 365
I+YS FQH++L +F + *P*FRRNMSFCT K P AGSKWN ENL GCS GPV
Sbjct: 470 IRYSLFQHKSLIKFFAARVAALP*P*FRRNMSFCT*KLPPAGSKWNICENLRGCSPGPVV 291
Query: 366 MEPETKTSMPPWGPDGWQSTVTI*CSQAWKGRDPSLPAMADGPWNFWPSKVSMEVSWYSP 545
M PETKT PPWGP+GWQSTV+I C WKGRDPSLPAMA GP NF PSKVSME SWYSP
Sbjct: 290 MVPETKTRTPPWGPEGWQSTVSILCWHCWKGRDPSLPAMAAGPPNFSPSKVSMEPSWYSP 111
Query: 546 TSAARLVSNVR**CSTKAFATASGSIAITS 635
TSAARL SNV **C T AF T SGSIA S
Sbjct: 110 TSAARLESNVW**C*TNAFDTESGSIASPS 21
Score = 204 bits (441), Expect = 3e-052
Identities = 93/139 (66%), Positives = 103/139 (74%)
Frame = -1 / +3
Query: 602 EGLRGALLPNVRHQPRGAGWAVPGDLHAHLRGPEVPGPVRHCRQARISPFPGLRASDRHR 423
EG+R ALLP+VR QPR AG AVPG LHAHLRG EV P RH QARISP P + A DR+R
Sbjct: 54 EGVRSALLPDVRLQPRRAGGAVPGRLHAHLRGREVRRPRRHRWQARISPLPAVPAQDRYR 233
Query: 422 RLPAIGSPGRHARLRLRFHTHRPRGAPHQVLPGIPFAAGRWVLLRAE*HVPPELWLKTAD 243
RLPA+G+PGR RLRLR H HRPR AP QVL +PFAA LLRAE*HVPPELWL+
Sbjct: 234 RLPALGAPGRRPRLRLRHHHHRPRRAPPQVLTDVPFAASWRELLRAE*HVPPELWLRKGG 413
Query: 242 TLVMKELFKGFMLKR*ILN 186
KEL +GFMLK+*I N
Sbjct: 414 HSGSKELDQGFMLKQ*ISN 470
Score = 122 bits (262), Expect(2) = 3e-033
Identities = 62/94 (65%), Positives = 67/94 (71%)
Frame = +2 / -2
Query: 185 H*VFIVST*NP*TIPSSQEYRLSLAIVQAEHVILHEEGPSGRQQMECLGELDGVLLGAGA 364
H +FIVST* P + Q R SL IVQAEHVILH E PS QQME L EL+GVL GAG
Sbjct: 471 HSIFIVST*IPDQVLCCQSGRPSLTIVQAEHVILHVEAPSSWQQMEHL*ELEGVLAGAGG 292
Query: 365 YGTGDEDEHASLGTRWLAVDGDDLMLAGLERERS 466
G GDEDE A+LG R LAVDG DL+LA LE ERS
Sbjct: 291 DGAGDEDEDAALGPRGLAVDGIDLVLALLEGERS 190
Score = 90.4 bits (191), Expect(2) = 1e-030
Identities = 37/64 (57%), Positives = 41/64 (64%)
Frame = +1 / -1
Query: 397 PGDPMAGXXXXXXXXXXPGKGEIRACRQWRTGPGTSGPRR*AWRSPGTAQPAPRGWCRTF 576
PG P AG G+GEIRAC++WR G TS PRR*AW PGTA PA RGW RT
Sbjct: 259 PGAPRAGSRRYRSCAGTAGRGEIRACQRWRRGRRTSRPRR*AWSRPGTAPPARRGWSRTS 80
Query: 577 GSNA 588
GS+A
Sbjct: 79 GSSA 68
Score = 62.9 bits (131), Expect(2) = 1e-030
Identities = 28/57 (49%), Positives = 37/57 (64%)
Frame = +1 / -1
Query: 178 AATLSIHRFNMKPLNNSFITRVSAVFSHSSGGTCHSARRRTQRPAANGMPGRT*WGA 348
A++ IH FN+ P ++S + +HSSGGTCHSARR + + AANG RT* GA
Sbjct: 478 ASSFDIHCFNINP*SSSLLPEWPPFLNHSSGGTCHSARRSSLQLAANGTSVRT*GGA 308
Score = 39.1 bits (79), Expect(2) = 3e-033
Identities = 17/24 (70%), Positives = 21/24 (87%)
Frame = +2 / -2
Query: 536 VQPNQRRAVGVERSVVMLHEGLRY 607
VQP+QR AVGVER VV+L+E LR+
Sbjct: 120 VQPHQRGAVGVERLVVVLNERLRH 49
>gb|BU999832.1|BU999832 HI15P15r HI Hordeum vulgare subsp. vulgare cDNA clone HI15P15
5-PRIME, mRNA sequence
Length = 534
Score = 271 bits (587), Expect = 2e-072
Identities = 110/145 (75%), Positives = 128/145 (88%)
Frame = -2 / +2
Query: 625 AMDPDAVAKAFVEHYYRTFDTNRAALVGLYQETSMLTFEGQKFQGPSAIAGKLGSLPFQA 446
AMDPD+V+KAFV+HYY+TFD+NRAALVGLYQ+ SMLTFEG+KF GP+AIAGKLGSLPFQ
Sbjct: 23 AMDPDSVSKAFVQHYYQTFDSNRAALVGLYQDGSMLTFEGEKFGGPAAIAGKLGSLPFQQ 202
Query: 445 CEHQIVTVDCQPSGPQGGMLVFVSGSIRTGPEEHPIKFSQAFHLLPAAGSFFVQNDMFRL 266
C+H+I TVDCQPSGPQGG+LVFVSG+I TGP EHP+KFSQ FHLLPA GSF+VQNDMFRL
Sbjct: 203 CQHKIDTVDCQPSGPQGGVLVFVSGTITTGPGEHPLKFSQMFHLLPAGGSFYVQNDMFRL 382
Query: 265 NYG*RQPILL**RNCLRVSC*NDEY 191
NYG* + L +N +R C*N+EY
Sbjct: 383 NYG*GRAATLAAKNLIRDLC*NNEY 457
Score = 240 bits (518), Expect = 8e-063
Identities = 106/150 (70%), Positives = 113/150 (75%)
Frame = +3 / -1
Query: 186 IKYSSFQHETLKQFLHHKSIGCL*P*FRRNMSFCTKKDPAAGSKWNAWENLMGCSSGPVR 365
I+YS FQH++L +F + *P*FRRNMSFCT K P AGSKWN ENL GCS GPV
Sbjct: 462 IRYSLFQHKSLIKFFAARVAALP*P*FRRNMSFCT*KLPPAGSKWNICENLRGCSPGPVV 283
Query: 366 MEPETKTSMPPWGPDGWQSTVTI*CSQAWKGRDPSLPAMADGPWNFWPSKVSMEVSWYSP 545
M PETKT PPWGP+GWQSTV+I C WKGRDPSLPAMA GP NF PSKVSME SWYSP
Sbjct: 282 MVPETKTRTPPWGPEGWQSTVSILCWHCWKGRDPSLPAMAAGPPNFSPSKVSMEPSWYSP 103
Query: 546 TSAARLVSNVR**CSTKAFATASGSIAITS 635
TSAARL SNV **C T AF T SGSIA S
Sbjct: 102 TSAARLESNVW**C*TNAFDTESGSIASPS 13
Score = 204 bits (441), Expect = 3e-052
Identities = 93/139 (66%), Positives = 103/139 (74%)
Frame = -1 / +1
Query: 602 EGLRGALLPNVRHQPRGAGWAVPGDLHAHLRGPEVPGPVRHCRQARISPFPGLRASDRHR 423
EG+R ALLP+VR QPR AG AVPG LHAHLRG EV P RH QARISP P + A DR+R
Sbjct: 46 EGVRSALLPDVRLQPRRAGGAVPGRLHAHLRGREVRRPRRHRWQARISPLPAVPAQDRYR 225
Query: 422 RLPAIGSPGRHARLRLRFHTHRPRGAPHQVLPGIPFAAGRWVLLRAE*HVPPELWLKTAD 243
RLPA+G+PGR RLRLR H HRPR AP QVL +PFAA LLRAE*HVPPELWL+
Sbjct: 226 RLPALGAPGRRPRLRLRHHHHRPRRAPPQVLTDVPFAASWRELLRAE*HVPPELWLRKGG 405
Query: 242 TLVMKELFKGFMLKR*ILN 186
KEL +GFMLK+*I N
Sbjct: 406 HSGSKELDQGFMLKQ*ISN 462
Score = 122 bits (262), Expect(2) = 3e-033
Identities = 62/94 (65%), Positives = 67/94 (71%)
Frame = +2 / -3
Query: 185 H*VFIVST*NP*TIPSSQEYRLSLAIVQAEHVILHEEGPSGRQQMECLGELDGVLLGAGA 364
H +FIVST* P + Q R SL IVQAEHVILH E PS QQME L EL+GVL GAG
Sbjct: 463 HSIFIVST*IPDQVLCCQSGRPSLTIVQAEHVILHVEAPSSWQQMEHL*ELEGVLAGAGG 284
Query: 365 YGTGDEDEHASLGTRWLAVDGDDLMLAGLERERS 466
G GDEDE A+LG R LAVDG DL+LA LE ERS
Sbjct: 283 DGAGDEDEDAALGPRGLAVDGIDLVLALLEGERS 182
Score = 90.4 bits (191), Expect(2) = 1e-030
Identities = 37/64 (57%), Positives = 41/64 (64%)
Frame = +1 / -2
Query: 397 PGDPMAGXXXXXXXXXXPGKGEIRACRQWRTGPGTSGPRR*AWRSPGTAQPAPRGWCRTF 576
PG P AG G+GEIRAC++WR G TS PRR*AW PGTA PA RGW RT
Sbjct: 251 PGAPRAGSRRYRSCAGTAGRGEIRACQRWRRGRRTSRPRR*AWSRPGTAPPARRGWSRTS 72
Query: 577 GSNA 588
GS+A
Sbjct: 71 GSSA 60
Score = 62.9 bits (131), Expect(2) = 1e-030
Identities = 28/57 (49%), Positives = 37/57 (64%)
Frame = +1 / -2
Query: 178 AATLSIHRFNMKPLNNSFITRVSAVFSHSSGGTCHSARRRTQRPAANGMPGRT*WGA 348
A++ IH FN+ P ++S + +HSSGGTCHSARR + + AANG RT* GA
Sbjct: 470 ASSFDIHCFNINP*SSSLLPEWPPFLNHSSGGTCHSARRSSLQLAANGTSVRT*GGA 300
Score = 39.1 bits (79), Expect(2) = 3e-033
Identities = 17/24 (70%), Positives = 21/24 (87%)
Frame = +2 / -3
Query: 536 VQPNQRRAVGVERSVVMLHEGLRY 607
VQP+QR AVGVER VV+L+E LR+
Sbjct: 112 VQPHQRGAVGVERLVVVLNERLRH 41
>gb|CA013173.1|CA013173 HT07J22r HT Hordeum vulgare subsp. vulgare cDNA clone HT07J22
5-PRIME, mRNA sequence
Length = 504
Score = 271 bits (587), Expect = 2e-072
Identities = 110/145 (75%), Positives = 128/145 (88%)
Frame = -2 / +1
Query: 625 AMDPDAVAKAFVEHYYRTFDTNRAALVGLYQETSMLTFEGQKFQGPSAIAGKLGSLPFQA 446
AMDPD+V+KAFV+HYY+TFD+NRAALVGLYQ+ SMLTFEG+KF GP+AIAGKLGSLPFQ
Sbjct: 40 AMDPDSVSKAFVQHYYQTFDSNRAALVGLYQDGSMLTFEGEKFGGPAAIAGKLGSLPFQQ 219
Query: 445 CEHQIVTVDCQPSGPQGGMLVFVSGSIRTGPEEHPIKFSQAFHLLPAAGSFFVQNDMFRL 266
C+H+I TVDCQPSGPQGG+LVFVSG+I TGP EHP+KFSQ FHLLPA GSF+VQNDMFRL
Sbjct: 220 CQHKIDTVDCQPSGPQGGVLVFVSGTITTGPGEHPLKFSQMFHLLPAGGSFYVQNDMFRL 399
Query: 265 NYG*RQPILL**RNCLRVSC*NDEY 191
NYG* + L +N +R C*N+EY
Sbjct: 400 NYG*GRAATLAAKNLIRDLC*NNEY 474
Score = 240 bits (518), Expect = 8e-063
Identities = 106/150 (70%), Positives = 113/150 (75%)
Frame = +3 / -2
Query: 186 IKYSSFQHETLKQFLHHKSIGCL*P*FRRNMSFCTKKDPAAGSKWNAWENLMGCSSGPVR 365
I+YS FQH++L +F + *P*FRRNMSFCT K P AGSKWN ENL GCS GPV
Sbjct: 479 IRYSLFQHKSLIKFFAARVAALP*P*FRRNMSFCT*KLPPAGSKWNICENLRGCSPGPVV 300
Query: 366 MEPETKTSMPPWGPDGWQSTVTI*CSQAWKGRDPSLPAMADGPWNFWPSKVSMEVSWYSP 545
M PETKT PPWGP+GWQSTV+I C WKGRDPSLPAMA GP NF PSKVSME SWYSP
Sbjct: 299 MVPETKTRTPPWGPEGWQSTVSILCWHCWKGRDPSLPAMAAGPPNFSPSKVSMEPSWYSP 120
Query: 546 TSAARLVSNVR**CSTKAFATASGSIAITS 635
TSAARL SNV **C T AF T SGSIA S
Sbjct: 119 TSAARLESNVW**C*TNAFDTESGSIASPS 30
Score = 204 bits (441), Expect = 3e-052
Identities = 93/139 (66%), Positives = 103/139 (74%)
Frame = -1 / +3
Query: 602 EGLRGALLPNVRHQPRGAGWAVPGDLHAHLRGPEVPGPVRHCRQARISPFPGLRASDRHR 423
EG+R ALLP+VR QPR AG AVPG LHAHLRG EV P RH QARISP P + A DR+R
Sbjct: 63 EGVRSALLPDVRLQPRRAGGAVPGRLHAHLRGREVRRPRRHRWQARISPLPAVPAQDRYR 242
Query: 422 RLPAIGSPGRHARLRLRFHTHRPRGAPHQVLPGIPFAAGRWVLLRAE*HVPPELWLKTAD 243
RLPA+G+PGR RLRLR H HRPR AP QVL +PFAA LLRAE*HVPPELWL+
Sbjct: 243 RLPALGAPGRRPRLRLRHHHHRPRRAPPQVLTDVPFAASWRELLRAE*HVPPELWLRKGG 422
Query: 242 TLVMKELFKGFMLKR*ILN 186
KEL +GFMLK+*I N
Sbjct: 423 HSGSKELDQGFMLKQ*ISN 479
Score = 122 bits (262), Expect(2) = 3e-033
Identities = 62/94 (65%), Positives = 67/94 (71%)
Frame = +2 / -1
Query: 185 H*VFIVST*NP*TIPSSQEYRLSLAIVQAEHVILHEEGPSGRQQMECLGELDGVLLGAGA 364
H +FIVST* P + Q R SL IVQAEHVILH E PS QQME L EL+GVL GAG
Sbjct: 480 HSIFIVST*IPDQVLCCQSGRPSLTIVQAEHVILHVEAPSSWQQMEHL*ELEGVLAGAGG 301
Query: 365 YGTGDEDEHASLGTRWLAVDGDDLMLAGLERERS 466
G GDEDE A+LG R LAVDG DL+LA LE ERS
Sbjct: 300 DGAGDEDEDAALGPRGLAVDGIDLVLALLEGERS 199
Score = 90.4 bits (191), Expect(2) = 1e-030
Identities = 37/64 (57%), Positives = 41/64 (64%)
Frame = +1 / -3
Query: 397 PGDPMAGXXXXXXXXXXPGKGEIRACRQWRTGPGTSGPRR*AWRSPGTAQPAPRGWCRTF 576
PG P AG G+GEIRAC++WR G TS PRR*AW PGTA PA RGW RT
Sbjct: 268 PGAPRAGSRRYRSCAGTAGRGEIRACQRWRRGRRTSRPRR*AWSRPGTAPPARRGWSRTS 89
Query: 577 GSNA 588
GS+A
Sbjct: 88 GSSA 77
Score = 62.9 bits (131), Expect(2) = 1e-030
Identities = 28/57 (49%), Positives = 37/57 (64%)
Frame = +1 / -3
Query: 178 AATLSIHRFNMKPLNNSFITRVSAVFSHSSGGTCHSARRRTQRPAANGMPGRT*WGA 348
A++ IH FN+ P ++S + +HSSGGTCHSARR + + AANG RT* GA
Sbjct: 487 ASSFDIHCFNINP*SSSLLPEWPPFLNHSSGGTCHSARRSSLQLAANGTSVRT*GGA 317
Score = 39.1 bits (79), Expect(2) = 3e-033
Identities = 17/24 (70%), Positives = 21/24 (87%)
Frame = +2 / -1
Query: 536 VQPNQRRAVGVERSVVMLHEGLRY 607
VQP+QR AVGVER VV+L+E LR+
Sbjct: 129 VQPHQRGAVGVERLVVVLNERLRH 58
>gb|CA013628.1|CA013628 HT09A18r HT Hordeum vulgare subsp. vulgare cDNA clone HT09A18
5-PRIME, mRNA sequence
Length = 650
Score = 271 bits (587), Expect = 2e-072
Identities = 110/145 (75%), Positives = 128/145 (88%)
Frame = -2 / +1
Query: 625 AMDPDAVAKAFVEHYYRTFDTNRAALVGLYQETSMLTFEGQKFQGPSAIAGKLGSLPFQA 446
AMDPD+V+KAFV+HYY+TFD+NRAALVGLYQ+ SMLTFEG+KF GP+AIAGKLGSLPFQ
Sbjct: 46 AMDPDSVSKAFVQHYYQTFDSNRAALVGLYQDGSMLTFEGEKFGGPAAIAGKLGSLPFQQ 225
Query: 445 CEHQIVTVDCQPSGPQGGMLVFVSGSIRTGPEEHPIKFSQAFHLLPAAGSFFVQNDMFRL 266
C+H+I TVDCQPSGPQGG+LVFVSG+I TGP EHP+KFSQ FHLLPA GSF+VQNDMFRL
Sbjct: 226 CQHKIDTVDCQPSGPQGGVLVFVSGTITTGPGEHPLKFSQMFHLLPAGGSFYVQNDMFRL 405
Query: 265 NYG*RQPILL**RNCLRVSC*NDEY 191
NYG* + L +N +R C*N+EY
Sbjct: 406 NYG*GRAATLAAKNLIRDLC*NNEY 480
Score = 240 bits (518), Expect = 8e-063
Identities = 106/150 (70%), Positives = 113/150 (75%)
Frame = +3 / -1
Query: 186 IKYSSFQHETLKQFLHHKSIGCL*P*FRRNMSFCTKKDPAAGSKWNAWENLMGCSSGPVR 365
I+YS FQH++L +F + *P*FRRNMSFCT K P AGSKWN ENL GCS GPV
Sbjct: 485 IRYSLFQHKSLIKFFAARVAALP*P*FRRNMSFCT*KLPPAGSKWNICENLRGCSPGPVV 306
Query: 366 MEPETKTSMPPWGPDGWQSTVTI*CSQAWKGRDPSLPAMADGPWNFWPSKVSMEVSWYSP 545
M PETKT PPWGP+GWQSTV+I C WKGRDPSLPAMA GP NF PSKVSME SWYSP
Sbjct: 305 MVPETKTRTPPWGPEGWQSTVSILCWHCWKGRDPSLPAMAAGPPNFSPSKVSMEPSWYSP 126
Query: 546 TSAARLVSNVR**CSTKAFATASGSIAITS 635
TSAARL SNV **C T AF T SGSIA S
Sbjct: 125 TSAARLESNVW**C*TNAFDTESGSIASPS 36
Score = 204 bits (441), Expect = 3e-052
Identities = 93/139 (66%), Positives = 103/139 (74%)
Frame = -1 / +3
Query: 602 EGLRGALLPNVRHQPRGAGWAVPGDLHAHLRGPEVPGPVRHCRQARISPFPGLRASDRHR 423
EG+R ALLP+VR QPR AG AVPG LHAHLRG EV P RH QARISP P + A DR+R
Sbjct: 69 EGVRSALLPDVRLQPRRAGGAVPGRLHAHLRGREVRRPRRHRWQARISPLPAVPAQDRYR 248
Query: 422 RLPAIGSPGRHARLRLRFHTHRPRGAPHQVLPGIPFAAGRWVLLRAE*HVPPELWLKTAD 243
RLPA+G+PGR RLRLR H HRPR AP QVL +PFAA LLRAE*HVPPELWL+
Sbjct: 249 RLPALGAPGRRPRLRLRHHHHRPRRAPPQVLTDVPFAASWRELLRAE*HVPPELWLRKGG 428
Query: 242 TLVMKELFKGFMLKR*ILN 186
KEL +GFMLK+*I N
Sbjct: 429 HSGSKELDQGFMLKQ*ISN 485
Score = 122 bits (262), Expect(2) = 3e-033
Identities = 62/94 (65%), Positives = 67/94 (71%)
Frame = +2 / -3
Query: 185 H*VFIVST*NP*TIPSSQEYRLSLAIVQAEHVILHEEGPSGRQQMECLGELDGVLLGAGA 364
H +FIVST* P + Q R SL IVQAEHVILH E PS QQME L EL+GVL GAG
Sbjct: 486 HSIFIVST*IPDQVLCCQSGRPSLTIVQAEHVILHVEAPSSWQQMEHL*ELEGVLAGAGG 307
Query: 365 YGTGDEDEHASLGTRWLAVDGDDLMLAGLERERS 466
G GDEDE A+LG R LAVDG DL+LA LE ERS
Sbjct: 306 DGAGDEDEDAALGPRGLAVDGIDLVLALLEGERS 205
Score = 90.4 bits (191), Expect(2) = 1e-030
Identities = 37/64 (57%), Positives = 41/64 (64%)
Frame = +1 / -2
Query: 397 PGDPMAGXXXXXXXXXXPGKGEIRACRQWRTGPGTSGPRR*AWRSPGTAQPAPRGWCRTF 576
PG P AG G+GEIRAC++WR G TS PRR*AW PGTA PA RGW RT
Sbjct: 274 PGAPRAGSRRYRSCAGTAGRGEIRACQRWRRGRRTSRPRR*AWSRPGTAPPARRGWSRTS 95
Query: 577 GSNA 588
GS+A
Sbjct: 94 GSSA 83
Score = 62.9 bits (131), Expect(2) = 1e-030
Identities = 28/57 (49%), Positives = 37/57 (64%)
Frame = +1 / -2
Query: 178 AATLSIHRFNMKPLNNSFITRVSAVFSHSSGGTCHSARRRTQRPAANGMPGRT*WGA 348
A++ IH FN+ P ++S + +HSSGGTCHSARR + + AANG RT* GA
Sbjct: 493 ASSFDIHCFNINP*SSSLLPEWPPFLNHSSGGTCHSARRSSLQLAANGTSVRT*GGA 323
Score = 39.1 bits (79), Expect(2) = 3e-033
Identities = 17/24 (70%), Positives = 21/24 (87%)
Frame = +2 / -3
Query: 536 VQPNQRRAVGVERSVVMLHEGLRY 607
VQP+QR AVGVER VV+L+E LR+
Sbjct: 135 VQPHQRGAVGVERLVVVLNERLRH 64
>gb|CA021210.1|CA021210 HZ39H02r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ39H02
5-PRIME, mRNA sequence
Length = 580
Score = 271 bits (587), Expect = 2e-072
Identities = 110/145 (75%), Positives = 128/145 (88%)
Frame = -2 / +3
Query: 625 AMDPDAVAKAFVEHYYRTFDTNRAALVGLYQETSMLTFEGQKFQGPSAIAGKLGSLPFQA 446
AMDPD+V+KAFV+HYY+TFD+NRAALVGLYQ+ SMLTFEG+KF GP+AIAGKLGSLPFQ
Sbjct: 69 AMDPDSVSKAFVQHYYQTFDSNRAALVGLYQDGSMLTFEGEKFGGPAAIAGKLGSLPFQQ 248
Query: 445 CEHQIVTVDCQPSGPQGGMLVFVSGSIRTGPEEHPIKFSQAFHLLPAAGSFFVQNDMFRL 266
C+H+I TVDCQPSGPQGG+LVFVSG+I TGP EHP+KFSQ FHLLPA GSF+VQNDMFRL
Sbjct: 249 CQHKIDTVDCQPSGPQGGVLVFVSGTITTGPGEHPLKFSQMFHLLPAGGSFYVQNDMFRL 428
Query: 265 NYG*RQPILL**RNCLRVSC*NDEY 191
NYG* + L +N +R C*N+EY
Sbjct: 429 NYG*GRAATLAAKNLIRDLC*NNEY 503
Score = 240 bits (518), Expect = 8e-063
Identities = 106/150 (70%), Positives = 113/150 (75%)
Frame = +3 / -1
Query: 186 IKYSSFQHETLKQFLHHKSIGCL*P*FRRNMSFCTKKDPAAGSKWNAWENLMGCSSGPVR 365
I+YS FQH++L +F + *P*FRRNMSFCT K P AGSKWN ENL GCS GPV
Sbjct: 508 IRYSLFQHKSLIKFFAARVAALP*P*FRRNMSFCT*KLPPAGSKWNICENLRGCSPGPVV 329
Query: 366 MEPETKTSMPPWGPDGWQSTVTI*CSQAWKGRDPSLPAMADGPWNFWPSKVSMEVSWYSP 545
M PETKT PPWGP+GWQSTV+I C WKGRDPSLPAMA GP NF PSKVSME SWYSP
Sbjct: 328 MVPETKTRTPPWGPEGWQSTVSILCWHCWKGRDPSLPAMAAGPPNFSPSKVSMEPSWYSP 149
Query: 546 TSAARLVSNVR**CSTKAFATASGSIAITS 635
TSAARL SNV **C T AF T SGSIA S
Sbjct: 148 TSAARLESNVW**C*TNAFDTESGSIASPS 59
Score = 204 bits (441), Expect = 3e-052
Identities = 93/139 (66%), Positives = 103/139 (74%)
Frame = -1 / +2
Query: 602 EGLRGALLPNVRHQPRGAGWAVPGDLHAHLRGPEVPGPVRHCRQARISPFPGLRASDRHR 423
EG+R ALLP+VR QPR AG AVPG LHAHLRG EV P RH QARISP P + A DR+R
Sbjct: 92 EGVRSALLPDVRLQPRRAGGAVPGRLHAHLRGREVRRPRRHRWQARISPLPAVPAQDRYR 271
Query: 422 RLPAIGSPGRHARLRLRFHTHRPRGAPHQVLPGIPFAAGRWVLLRAE*HVPPELWLKTAD 243
RLPA+G+PGR RLRLR H HRPR AP QVL +PFAA LLRAE*HVPPELWL+
Sbjct: 272 RLPALGAPGRRPRLRLRHHHHRPRRAPPQVLTDVPFAASWRELLRAE*HVPPELWLRKGG 451
Query: 242 TLVMKELFKGFMLKR*ILN 186
KEL +GFMLK+*I N
Sbjct: 452 HSGSKELDQGFMLKQ*ISN 508
Score = 122 bits (262), Expect(2) = 3e-033
Identities = 62/94 (65%), Positives = 67/94 (71%)
Frame = +2 / -3
Query: 185 H*VFIVST*NP*TIPSSQEYRLSLAIVQAEHVILHEEGPSGRQQMECLGELDGVLLGAGA 364
H +FIVST* P + Q R SL IVQAEHVILH E PS QQME L EL+GVL GAG
Sbjct: 509 HSIFIVST*IPDQVLCCQSGRPSLTIVQAEHVILHVEAPSSWQQMEHL*ELEGVLAGAGG 330
Query: 365 YGTGDEDEHASLGTRWLAVDGDDLMLAGLERERS 466
G GDEDE A+LG R LAVDG DL+LA LE ERS
Sbjct: 329 DGAGDEDEDAALGPRGLAVDGIDLVLALLEGERS 228
Score = 90.4 bits (191), Expect(2) = 1e-030
Identities = 37/64 (57%), Positives = 41/64 (64%)
Frame = +1 / -2
Query: 397 PGDPMAGXXXXXXXXXXPGKGEIRACRQWRTGPGTSGPRR*AWRSPGTAQPAPRGWCRTF 576
PG P AG G+GEIRAC++WR G TS PRR*AW PGTA PA RGW RT
Sbjct: 297 PGAPRAGSRRYRSCAGTAGRGEIRACQRWRRGRRTSRPRR*AWSRPGTAPPARRGWSRTS 118
Query: 577 GSNA 588
GS+A
Sbjct: 117 GSSA 106
Score = 62.9 bits (131), Expect(2) = 1e-030
Identities = 28/57 (49%), Positives = 37/57 (64%)
Frame = +1 / -2
Query: 178 AATLSIHRFNMKPLNNSFITRVSAVFSHSSGGTCHSARRRTQRPAANGMPGRT*WGA 348
A++ IH FN+ P ++S + +HSSGGTCHSARR + + AANG RT* GA
Sbjct: 516 ASSFDIHCFNINP*SSSLLPEWPPFLNHSSGGTCHSARRSSLQLAANGTSVRT*GGA 346
Score = 39.1 bits (79), Expect(2) = 3e-033
Identities = 17/24 (70%), Positives = 21/24 (87%)
Frame = +2 / -3
Query: 536 VQPNQRRAVGVERSVVMLHEGLRY 607
VQP+QR AVGVER VV+L+E LR+
Sbjct: 158 VQPHQRGAVGVERLVVVLNERLRH 87
>gb|CA025039.1|CA025039 HZ51A19r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ51A19
5-PRIME, mRNA sequence
Length = 474
Score = 271 bits (587), Expect = 2e-072
Identities = 110/145 (75%), Positives = 128/145 (88%)
Frame = -2 / +2
Query: 625 AMDPDAVAKAFVEHYYRTFDTNRAALVGLYQETSMLTFEGQKFQGPSAIAGKLGSLPFQA 446
AMDPD+V+KAFV+HYY+TFD+NRAALVGLYQ+ SMLTFEG+KF GP+AIAGKLGSLPFQ
Sbjct: 14 AMDPDSVSKAFVQHYYQTFDSNRAALVGLYQDGSMLTFEGEKFGGPAAIAGKLGSLPFQQ 193
Query: 445 CEHQIVTVDCQPSGPQGGMLVFVSGSIRTGPEEHPIKFSQAFHLLPAAGSFFVQNDMFRL 266
C+H+I TVDCQPSGPQGG+LVFVSG+I TGP EHP+KFSQ FHLLPA GSF+VQNDMFRL
Sbjct: 194 CQHKIDTVDCQPSGPQGGVLVFVSGTITTGPGEHPLKFSQMFHLLPAGGSFYVQNDMFRL 373
Query: 265 NYG*RQPILL**RNCLRVSC*NDEY 191
NYG* + L +N +R C*N+EY
Sbjct: 374 NYG*GRAATLAAKNLIRDLC*NNEY 448
Score = 240 bits (518), Expect = 8e-063
Identities = 106/150 (70%), Positives = 113/150 (75%)
Frame = +3 / -1
Query: 186 IKYSSFQHETLKQFLHHKSIGCL*P*FRRNMSFCTKKDPAAGSKWNAWENLMGCSSGPVR 365
I+YS FQH++L +F + *P*FRRNMSFCT K P AGSKWN ENL GCS GPV
Sbjct: 453 IRYSLFQHKSLIKFFAARVAALP*P*FRRNMSFCT*KLPPAGSKWNICENLRGCSPGPVV 274
Query: 366 MEPETKTSMPPWGPDGWQSTVTI*CSQAWKGRDPSLPAMADGPWNFWPSKVSMEVSWYSP 545
M PETKT PPWGP+GWQSTV+I C WKGRDPSLPAMA GP NF PSKVSME SWYSP
Sbjct: 273 MVPETKTRTPPWGPEGWQSTVSILCWHCWKGRDPSLPAMAAGPPNFSPSKVSMEPSWYSP 94
Query: 546 TSAARLVSNVR**CSTKAFATASGSIAITS 635
TSAARL SNV **C T AF T SGSIA S
Sbjct: 93 TSAARLESNVW**C*TNAFDTESGSIASPS 4
Score = 204 bits (441), Expect = 3e-052
Identities = 93/139 (66%), Positives = 103/139 (74%)
Frame = -1 / +1
Query: 602 EGLRGALLPNVRHQPRGAGWAVPGDLHAHLRGPEVPGPVRHCRQARISPFPGLRASDRHR 423
EG+R ALLP+VR QPR AG AVPG LHAHLRG EV P RH QARISP P + A DR+R
Sbjct: 37 EGVRSALLPDVRLQPRRAGGAVPGRLHAHLRGREVRRPRRHRWQARISPLPAVPAQDRYR 216
Query: 422 RLPAIGSPGRHARLRLRFHTHRPRGAPHQVLPGIPFAAGRWVLLRAE*HVPPELWLKTAD 243
RLPA+G+PGR RLRLR H HRPR AP QVL +PFAA LLRAE*HVPPELWL+
Sbjct: 217 RLPALGAPGRRPRLRLRHHHHRPRRAPPQVLTDVPFAASWRELLRAE*HVPPELWLRKGG 396
Query: 242 TLVMKELFKGFMLKR*ILN 186
KEL +GFMLK+*I N
Sbjct: 397 HSGSKELDQGFMLKQ*ISN 453
Score = 122 bits (262), Expect(2) = 3e-033
Identities = 62/94 (65%), Positives = 67/94 (71%)
Frame = +2 / -3
Query: 185 H*VFIVST*NP*TIPSSQEYRLSLAIVQAEHVILHEEGPSGRQQMECLGELDGVLLGAGA 364
H +FIVST* P + Q R SL IVQAEHVILH E PS QQME L EL+GVL GAG
Sbjct: 454 HSIFIVST*IPDQVLCCQSGRPSLTIVQAEHVILHVEAPSSWQQMEHL*ELEGVLAGAGG 275
Query: 365 YGTGDEDEHASLGTRWLAVDGDDLMLAGLERERS 466
G GDEDE A+LG R LAVDG DL+LA LE ERS
Sbjct: 274 DGAGDEDEDAALGPRGLAVDGIDLVLALLEGERS 173
Score = 90.4 bits (191), Expect(2) = 1e-030
Identities = 37/64 (57%), Positives = 41/64 (64%)
Frame = +1 / -2
Query: 397 PGDPMAGXXXXXXXXXXPGKGEIRACRQWRTGPGTSGPRR*AWRSPGTAQPAPRGWCRTF 576
PG P AG G+GEIRAC++WR G TS PRR*AW PGTA PA RGW RT
Sbjct: 242 PGAPRAGSRRYRSCAGTAGRGEIRACQRWRRGRRTSRPRR*AWSRPGTAPPARRGWSRTS 63
Query: 577 GSNA 588
GS+A
Sbjct: 62 GSSA 51
Score = 62.9 bits (131), Expect(2) = 1e-030
Identities = 28/57 (49%), Positives = 37/57 (64%)
Frame = +1 / -2
Query: 178 AATLSIHRFNMKPLNNSFITRVSAVFSHSSGGTCHSARRRTQRPAANGMPGRT*WGA 348
A++ IH FN+ P ++S + +HSSGGTCHSARR + + AANG RT* GA
Sbjct: 461 ASSFDIHCFNINP*SSSLLPEWPPFLNHSSGGTCHSARRSSLQLAANGTSVRT*GGA 291
Score = 39.1 bits (79), Expect(2) = 3e-033
Identities = 17/24 (70%), Positives = 21/24 (87%)
Frame = +2 / -3
Query: 536 VQPNQRRAVGVERSVVMLHEGLRY 607
VQP+QR AVGVER VV+L+E LR+
Sbjct: 103 VQPHQRGAVGVERLVVVLNERLRH 32
>gb|CA025246.1|CA025246 HZ51J13r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ51J13
5-PRIME, mRNA sequence
Length = 561
Score = 271 bits (587), Expect = 2e-072
Identities = 110/145 (75%), Positives = 128/145 (88%)
Frame = -2 / +1
Query: 625 AMDPDAVAKAFVEHYYRTFDTNRAALVGLYQETSMLTFEGQKFQGPSAIAGKLGSLPFQA 446
AMDPD+V+KAFV+HYY+TFD+NRAALVGLYQ+ SMLTFEG+KF GP+AIAGKLGSLPFQ
Sbjct: 34 AMDPDSVSKAFVQHYYQTFDSNRAALVGLYQDGSMLTFEGEKFGGPAAIAGKLGSLPFQQ 213
Query: 445 CEHQIVTVDCQPSGPQGGMLVFVSGSIRTGPEEHPIKFSQAFHLLPAAGSFFVQNDMFRL 266
C+H+I TVDCQPSGPQGG+LVFVSG+I TGP EHP+KFSQ FHLLPA GSF+VQNDMFRL
Sbjct: 214 CQHKIDTVDCQPSGPQGGVLVFVSGTITTGPGEHPLKFSQMFHLLPAGGSFYVQNDMFRL 393
Query: 265 NYG*RQPILL**RNCLRVSC*NDEY 191
NYG* + L +N +R C*N+EY
Sbjct: 394 NYG*GRAATLAAKNLIRDLC*NNEY 468
Score = 240 bits (518), Expect = 8e-063
Identities = 106/150 (70%), Positives = 113/150 (75%)
Frame = +3 / -2
Query: 186 IKYSSFQHETLKQFLHHKSIGCL*P*FRRNMSFCTKKDPAAGSKWNAWENLMGCSSGPVR 365
I+YS FQH++L +F + *P*FRRNMSFCT K P AGSKWN ENL GCS GPV
Sbjct: 473 IRYSLFQHKSLIKFFAARVAALP*P*FRRNMSFCT*KLPPAGSKWNICENLRGCSPGPVV 294
Query: 366 MEPETKTSMPPWGPDGWQSTVTI*CSQAWKGRDPSLPAMADGPWNFWPSKVSMEVSWYSP 545
M PETKT PPWGP+GWQSTV+I C WKGRDPSLPAMA GP NF PSKVSME SWYSP
Sbjct: 293 MVPETKTRTPPWGPEGWQSTVSILCWHCWKGRDPSLPAMAAGPPNFSPSKVSMEPSWYSP 114
Query: 546 TSAARLVSNVR**CSTKAFATASGSIAITS 635
TSAARL SNV **C T AF T SGSIA S
Sbjct: 113 TSAARLESNVW**C*TNAFDTESGSIASPS 24
Score = 204 bits (441), Expect = 3e-052
Identities = 93/139 (66%), Positives = 103/139 (74%)
Frame = -1 / +3
Query: 602 EGLRGALLPNVRHQPRGAGWAVPGDLHAHLRGPEVPGPVRHCRQARISPFPGLRASDRHR 423
EG+R ALLP+VR QPR AG AVPG LHAHLRG EV P RH QARISP P + A DR+R
Sbjct: 57 EGVRSALLPDVRLQPRRAGGAVPGRLHAHLRGREVRRPRRHRWQARISPLPAVPAQDRYR 236
Query: 422 RLPAIGSPGRHARLRLRFHTHRPRGAPHQVLPGIPFAAGRWVLLRAE*HVPPELWLKTAD 243
RLPA+G+PGR RLRLR H HRPR AP QVL +PFAA LLRAE*HVPPELWL+
Sbjct: 237 RLPALGAPGRRPRLRLRHHHHRPRRAPPQVLTDVPFAASWRELLRAE*HVPPELWLRKGG 416
Query: 242 TLVMKELFKGFMLKR*ILN 186
KEL +GFMLK+*I N
Sbjct: 417 HSGSKELDQGFMLKQ*ISN 473
Score = 122 bits (262), Expect(2) = 3e-033
Identities = 62/94 (65%), Positives = 67/94 (71%)
Frame = +2 / -1
Query: 185 H*VFIVST*NP*TIPSSQEYRLSLAIVQAEHVILHEEGPSGRQQMECLGELDGVLLGAGA 364
H +FIVST* P + Q R SL IVQAEHVILH E PS QQME L EL+GVL GAG
Sbjct: 474 HSIFIVST*IPDQVLCCQSGRPSLTIVQAEHVILHVEAPSSWQQMEHL*ELEGVLAGAGG 295
Query: 365 YGTGDEDEHASLGTRWLAVDGDDLMLAGLERERS 466
G GDEDE A+LG R LAVDG DL+LA LE ERS
Sbjct: 294 DGAGDEDEDAALGPRGLAVDGIDLVLALLEGERS 193
Score = 90.4 bits (191), Expect(2) = 1e-030
Identities = 37/64 (57%), Positives = 41/64 (64%)
Frame = +1 / -3
Query: 397 PGDPMAGXXXXXXXXXXPGKGEIRACRQWRTGPGTSGPRR*AWRSPGTAQPAPRGWCRTF 576
PG P AG G+GEIRAC++WR G TS PRR*AW PGTA PA RGW RT
Sbjct: 262 PGAPRAGSRRYRSCAGTAGRGEIRACQRWRRGRRTSRPRR*AWSRPGTAPPARRGWSRTS 83
Query: 577 GSNA 588
GS+A
Sbjct: 82 GSSA 71
Score = 62.9 bits (131), Expect(2) = 1e-030
Identities = 28/57 (49%), Positives = 37/57 (64%)
Frame = +1 / -3
Query: 178 AATLSIHRFNMKPLNNSFITRVSAVFSHSSGGTCHSARRRTQRPAANGMPGRT*WGA 348
A++ IH FN+ P ++S + +HSSGGTCHSARR + + AANG RT* GA
Sbjct: 481 ASSFDIHCFNINP*SSSLLPEWPPFLNHSSGGTCHSARRSSLQLAANGTSVRT*GGA 311
Score = 39.1 bits (79), Expect(2) = 3e-033
Identities = 17/24 (70%), Positives = 21/24 (87%)
Frame = +2 / -1
Query: 536 VQPNQRRAVGVERSVVMLHEGLRY 607
VQP+QR AVGVER VV+L+E LR+
Sbjct: 123 VQPHQRGAVGVERLVVVLNERLRH 52
>gb|CA029397.1|CA029397 HZ65B13r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ65B13
5-PRIME, mRNA sequence
Length = 564
Score = 271 bits (587), Expect = 2e-072
Identities = 110/145 (75%), Positives = 128/145 (88%)
Frame = -2 / +3
Query: 625 AMDPDAVAKAFVEHYYRTFDTNRAALVGLYQETSMLTFEGQKFQGPSAIAGKLGSLPFQA 446
AMDPD+V+KAFV+HYY+TFD+NRAALVGLYQ+ SMLTFEG+KF GP+AIAGKLGSLPFQ
Sbjct: 39 AMDPDSVSKAFVQHYYQTFDSNRAALVGLYQDGSMLTFEGEKFGGPAAIAGKLGSLPFQQ 218
Query: 445 CEHQIVTVDCQPSGPQGGMLVFVSGSIRTGPEEHPIKFSQAFHLLPAAGSFFVQNDMFRL 266
C+H+I TVDCQPSGPQGG+LVFVSG+I TGP EHP+KFSQ FHLLPA GSF+VQNDMFRL
Sbjct: 219 CQHKIDTVDCQPSGPQGGVLVFVSGTITTGPGEHPLKFSQMFHLLPAGGSFYVQNDMFRL 398
Query: 265 NYG*RQPILL**RNCLRVSC*NDEY 191
NYG* + L +N +R C*N+EY
Sbjct: 399 NYG*GRAATLAAKNLIRDLC*NNEY 473
Score = 240 bits (518), Expect = 8e-063
Identities = 106/150 (70%), Positives = 113/150 (75%)
Frame = +3 / -3
Query: 186 IKYSSFQHETLKQFLHHKSIGCL*P*FRRNMSFCTKKDPAAGSKWNAWENLMGCSSGPVR 365
I+YS FQH++L +F + *P*FRRNMSFCT K P AGSKWN ENL GCS GPV
Sbjct: 478 IRYSLFQHKSLIKFFAARVAALP*P*FRRNMSFCT*KLPPAGSKWNICENLRGCSPGPVV 299
Query: 366 MEPETKTSMPPWGPDGWQSTVTI*CSQAWKGRDPSLPAMADGPWNFWPSKVSMEVSWYSP 545
M PETKT PPWGP+GWQSTV+I C WKGRDPSLPAMA GP NF PSKVSME SWYSP
Sbjct: 298 MVPETKTRTPPWGPEGWQSTVSILCWHCWKGRDPSLPAMAAGPPNFSPSKVSMEPSWYSP 119
Query: 546 TSAARLVSNVR**CSTKAFATASGSIAITS 635
TSAARL SNV **C T AF T SGSIA S
Sbjct: 118 TSAARLESNVW**C*TNAFDTESGSIASPS 29
Score = 204 bits (441), Expect = 3e-052
Identities = 93/139 (66%), Positives = 103/139 (74%)
Frame = -1 / +2
Query: 602 EGLRGALLPNVRHQPRGAGWAVPGDLHAHLRGPEVPGPVRHCRQARISPFPGLRASDRHR 423
EG+R ALLP+VR QPR AG AVPG LHAHLRG EV P RH QARISP P + A DR+R
Sbjct: 62 EGVRSALLPDVRLQPRRAGGAVPGRLHAHLRGREVRRPRRHRWQARISPLPAVPAQDRYR 241
Query: 422 RLPAIGSPGRHARLRLRFHTHRPRGAPHQVLPGIPFAAGRWVLLRAE*HVPPELWLKTAD 243
RLPA+G+PGR RLRLR H HRPR AP QVL +PFAA LLRAE*HVPPELWL+
Sbjct: 242 RLPALGAPGRRPRLRLRHHHHRPRRAPPQVLTDVPFAASWRELLRAE*HVPPELWLRKGG 421
Query: 242 TLVMKELFKGFMLKR*ILN 186
KEL +GFMLK+*I N
Sbjct: 422 HSGSKELDQGFMLKQ*ISN 478
Score = 122 bits (262), Expect(2) = 3e-033
Identities = 62/94 (65%), Positives = 67/94 (71%)
Frame = +2 / -2
Query: 185 H*VFIVST*NP*TIPSSQEYRLSLAIVQAEHVILHEEGPSGRQQMECLGELDGVLLGAGA 364
H +FIVST* P + Q R SL IVQAEHVILH E PS QQME L EL+GVL GAG
Sbjct: 479 HSIFIVST*IPDQVLCCQSGRPSLTIVQAEHVILHVEAPSSWQQMEHL*ELEGVLAGAGG 300
Query: 365 YGTGDEDEHASLGTRWLAVDGDDLMLAGLERERS 466
G GDEDE A+LG R LAVDG DL+LA LE ERS
Sbjct: 299 DGAGDEDEDAALGPRGLAVDGIDLVLALLEGERS 198
Score = 90.4 bits (191), Expect(2) = 1e-030
Identities = 37/64 (57%), Positives = 41/64 (64%)
Frame = +1 / -1
Query: 397 PGDPMAGXXXXXXXXXXPGKGEIRACRQWRTGPGTSGPRR*AWRSPGTAQPAPRGWCRTF 576
PG P AG G+GEIRAC++WR G TS PRR*AW PGTA PA RGW RT
Sbjct: 267 PGAPRAGSRRYRSCAGTAGRGEIRACQRWRRGRRTSRPRR*AWSRPGTAPPARRGWSRTS 88
Query: 577 GSNA 588
GS+A
Sbjct: 87 GSSA 76
Score = 62.9 bits (131), Expect(2) = 1e-030
Identities = 28/57 (49%), Positives = 37/57 (64%)
Frame = +1 / -1
Query: 178 AATLSIHRFNMKPLNNSFITRVSAVFSHSSGGTCHSARRRTQRPAANGMPGRT*WGA 348
A++ IH FN+ P ++S + +HSSGGTCHSARR + + AANG RT* GA
Sbjct: 486 ASSFDIHCFNINP*SSSLLPEWPPFLNHSSGGTCHSARRSSLQLAANGTSVRT*GGA 316
Score = 39.1 bits (79), Expect(2) = 3e-033
Identities = 17/24 (70%), Positives = 21/24 (87%)
Frame = +2 / -2
Query: 536 VQPNQRRAVGVERSVVMLHEGLRY 607
VQP+QR AVGVER VV+L+E LR+
Sbjct: 128 VQPHQRGAVGVERLVVVLNERLRH 57
>gb|BJ549122.1|BJ549122 BJ549122 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags29h16 5', mRNA sequence
Length = 637
Score = 271 bits (587), Expect = 2e-072
Identities = 110/145 (75%), Positives = 128/145 (88%)
Frame = -2 / +3
Query: 625 AMDPDAVAKAFVEHYYRTFDTNRAALVGLYQETSMLTFEGQKFQGPSAIAGKLGSLPFQA 446
AMDPD+V+KAFV+HYY+TFD+NRAALVGLYQ+ SMLTFEG+KF GP+AIAGKLGSLPFQ
Sbjct: 84 AMDPDSVSKAFVQHYYQTFDSNRAALVGLYQDGSMLTFEGEKFGGPAAIAGKLGSLPFQQ 263
Query: 445 CEHQIVTVDCQPSGPQGGMLVFVSGSIRTGPEEHPIKFSQAFHLLPAAGSFFVQNDMFRL 266
C+H+I TVDCQPSGPQGG+LVFVSG+I TGP EHP+KFSQ FHLLPA GSF+VQNDMFRL
Sbjct: 264 CQHKIDTVDCQPSGPQGGVLVFVSGTITTGPGEHPLKFSQMFHLLPAGGSFYVQNDMFRL 443
Query: 265 NYG*RQPILL**RNCLRVSC*NDEY 191
NYG* + L +N +R C*N+EY
Sbjct: 444 NYG*GRAATLAAKNLIRDLC*NNEY 518
Score = 240 bits (518), Expect = 8e-063
Identities = 106/150 (70%), Positives = 113/150 (75%)
Frame = +3 / -1
Query: 186 IKYSSFQHETLKQFLHHKSIGCL*P*FRRNMSFCTKKDPAAGSKWNAWENLMGCSSGPVR 365
I+YS FQH++L +F + *P*FRRNMSFCT K P AGSKWN ENL GCS GPV
Sbjct: 523 IRYSLFQHKSLIKFFAARVAALP*P*FRRNMSFCT*KLPPAGSKWNICENLRGCSPGPVV 344
Query: 366 MEPETKTSMPPWGPDGWQSTVTI*CSQAWKGRDPSLPAMADGPWNFWPSKVSMEVSWYSP 545
M PETKT PPWGP+GWQSTV+I C WKGRDPSLPAMA GP NF PSKVSME SWYSP
Sbjct: 343 MVPETKTRTPPWGPEGWQSTVSILCWHCWKGRDPSLPAMAAGPPNFSPSKVSMEPSWYSP 164
Query: 546 TSAARLVSNVR**CSTKAFATASGSIAITS 635
TSAARL SNV **C T AF T SGSIA S
Sbjct: 163 TSAARLESNVW**C*TNAFDTESGSIASPS 74
Score = 204 bits (441), Expect = 3e-052
Identities = 93/139 (66%), Positives = 103/139 (74%)
Frame = -1 / +2
Query: 602 EGLRGALLPNVRHQPRGAGWAVPGDLHAHLRGPEVPGPVRHCRQARISPFPGLRASDRHR 423
EG+R ALLP+VR QPR AG AVPG LHAHLRG EV P RH QARISP P + A DR+R
Sbjct: 107 EGVRSALLPDVRLQPRRAGGAVPGRLHAHLRGREVRRPRRHRWQARISPLPAVPAQDRYR 286
Query: 422 RLPAIGSPGRHARLRLRFHTHRPRGAPHQVLPGIPFAAGRWVLLRAE*HVPPELWLKTAD 243
RLPA+G+PGR RLRLR H HRPR AP QVL +PFAA LLRAE*HVPPELWL+
Sbjct: 287 RLPALGAPGRRPRLRLRHHHHRPRRAPPQVLTDVPFAASWRELLRAE*HVPPELWLRKGG 466
Query: 242 TLVMKELFKGFMLKR*ILN 186
KEL +GFMLK+*I N
Sbjct: 467 HSGSKELDQGFMLKQ*ISN 523
Score = 122 bits (262), Expect(2) = 3e-033
Identities = 62/94 (65%), Positives = 67/94 (71%)
Frame = +2 / -3
Query: 185 H*VFIVST*NP*TIPSSQEYRLSLAIVQAEHVILHEEGPSGRQQMECLGELDGVLLGAGA 364
H +FIVST* P + Q R SL IVQAEHVILH E PS QQME L EL+GVL GAG
Sbjct: 524 HSIFIVST*IPDQVLCCQSGRPSLTIVQAEHVILHVEAPSSWQQMEHL*ELEGVLAGAGG 345
Query: 365 YGTGDEDEHASLGTRWLAVDGDDLMLAGLERERS 466
G GDEDE A+LG R LAVDG DL+LA LE ERS
Sbjct: 344 DGAGDEDEDAALGPRGLAVDGIDLVLALLEGERS 243
Score = 90.4 bits (191), Expect(2) = 1e-030
Identities = 37/64 (57%), Positives = 41/64 (64%)
Frame = +1 / -2
Query: 397 PGDPMAGXXXXXXXXXXPGKGEIRACRQWRTGPGTSGPRR*AWRSPGTAQPAPRGWCRTF 576
PG P AG G+GEIRAC++WR G TS PRR*AW PGTA PA RGW RT
Sbjct: 312 PGAPRAGSRRYRSCAGTAGRGEIRACQRWRRGRRTSRPRR*AWSRPGTAPPARRGWSRTS 133
Query: 577 GSNA 588
GS+A
Sbjct: 132 GSSA 121
Score = 62.9 bits (131), Expect(2) = 1e-030
Identities = 28/57 (49%), Positives = 37/57 (64%)
Frame = +1 / -2
Query: 178 AATLSIHRFNMKPLNNSFITRVSAVFSHSSGGTCHSARRRTQRPAANGMPGRT*WGA 348
A++ IH FN+ P ++S + +HSSGGTCHSARR + + AANG RT* GA
Sbjct: 531 ASSFDIHCFNINP*SSSLLPEWPPFLNHSSGGTCHSARRSSLQLAANGTSVRT*GGA 361
Score = 39.1 bits (79), Expect(2) = 3e-033
Identities = 17/24 (70%), Positives = 21/24 (87%)
Frame = +2 / -3
Query: 536 VQPNQRRAVGVERSVVMLHEGLRY 607
VQP+QR AVGVER VV+L+E LR+
Sbjct: 173 VQPHQRGAVGVERLVVVLNERLRH 102
>gb|CB860038.1|CB860038 HI12G19w HI Hordeum vulgare subsp. vulgare cDNA clone HI12G19
3-PRIME, mRNA sequence
Length = 586
Score = 271 bits (587), Expect = 2e-072
Identities = 110/145 (75%), Positives = 128/145 (88%)
Frame = -2 / -1
Query: 625 AMDPDAVAKAFVEHYYRTFDTNRAALVGLYQETSMLTFEGQKFQGPSAIAGKLGSLPFQA 446
AMDPD+V+KAFV+HYY+TFD+NRAALVGLYQ+ SMLTFEG+KF GP+AIAGKLGSLPFQ
Sbjct: 544 AMDPDSVSKAFVQHYYQTFDSNRAALVGLYQDGSMLTFEGEKFGGPAAIAGKLGSLPFQQ 365
Query: 445 CEHQIVTVDCQPSGPQGGMLVFVSGSIRTGPEEHPIKFSQAFHLLPAAGSFFVQNDMFRL 266
C+H+I TVDCQPSGPQGG+LVFVSG+I TGP EHP+KFSQ FHLLPA GSF+VQNDMFRL
Sbjct: 364 CQHKIDTVDCQPSGPQGGVLVFVSGTITTGPGEHPLKFSQMFHLLPAGGSFYVQNDMFRL 185
Query: 265 NYG*RQPILL**RNCLRVSC*NDEY 191
NYG* + L +N +R C*N+EY
Sbjct: 184 NYG*GRAATLAAKNLIRDLC*NNEY 110
Score = 240 bits (518), Expect = 8e-063
Identities = 106/150 (70%), Positives = 113/150 (75%)
Frame = +3 / +3
Query: 186 IKYSSFQHETLKQFLHHKSIGCL*P*FRRNMSFCTKKDPAAGSKWNAWENLMGCSSGPVR 365
I+YS FQH++L +F + *P*FRRNMSFCT K P AGSKWN ENL GCS GPV
Sbjct: 105 IRYSLFQHKSLIKFFAARVAALP*P*FRRNMSFCT*KLPPAGSKWNICENLRGCSPGPVV 284
Query: 366 MEPETKTSMPPWGPDGWQSTVTI*CSQAWKGRDPSLPAMADGPWNFWPSKVSMEVSWYSP 545
M PETKT PPWGP+GWQSTV+I C WKGRDPSLPAMA GP NF PSKVSME SWYSP
Sbjct: 285 MVPETKTRTPPWGPEGWQSTVSILCWHCWKGRDPSLPAMAAGPPNFSPSKVSMEPSWYSP 464
Query: 546 TSAARLVSNVR**CSTKAFATASGSIAITS 635
TSAARL SNV **C T AF T SGSIA S
Sbjct: 465 TSAARLESNVW**C*TNAFDTESGSIASPS 554
Score = 204 bits (441), Expect = 3e-052
Identities = 93/139 (66%), Positives = 103/139 (74%)
Frame = -1 / -3
Query: 602 EGLRGALLPNVRHQPRGAGWAVPGDLHAHLRGPEVPGPVRHCRQARISPFPGLRASDRHR 423
EG+R ALLP+VR QPR AG AVPG LHAHLRG EV P RH QARISP P + A DR+R
Sbjct: 521 EGVRSALLPDVRLQPRRAGGAVPGRLHAHLRGREVRRPRRHRWQARISPLPAVPAQDRYR 342
Query: 422 RLPAIGSPGRHARLRLRFHTHRPRGAPHQVLPGIPFAAGRWVLLRAE*HVPPELWLKTAD 243
RLPA+G+PGR RLRLR H HRPR AP QVL +PFAA LLRAE*HVPPELWL+
Sbjct: 341 RLPALGAPGRRPRLRLRHHHHRPRRAPPQVLTDVPFAASWRELLRAE*HVPPELWLRKGG 162
Query: 242 TLVMKELFKGFMLKR*ILN 186
KEL +GFMLK+*I N
Sbjct: 161 HSGSKELDQGFMLKQ*ISN 105
Score = 122 bits (262), Expect(2) = 3e-033
Identities = 62/94 (65%), Positives = 67/94 (71%)
Frame = +2 / +2
Query: 185 H*VFIVST*NP*TIPSSQEYRLSLAIVQAEHVILHEEGPSGRQQMECLGELDGVLLGAGA 364
H +FIVST* P + Q R SL IVQAEHVILH E PS QQME L EL+GVL GAG
Sbjct: 104 HSIFIVST*IPDQVLCCQSGRPSLTIVQAEHVILHVEAPSSWQQMEHL*ELEGVLAGAGG 283
Query: 365 YGTGDEDEHASLGTRWLAVDGDDLMLAGLERERS 466
G GDEDE A+LG R LAVDG DL+LA LE ERS
Sbjct: 284 DGAGDEDEDAALGPRGLAVDGIDLVLALLEGERS 385
Score = 90.4 bits (191), Expect(2) = 1e-030
Identities = 37/64 (57%), Positives = 41/64 (64%)
Frame = +1 / +1
Query: 397 PGDPMAGXXXXXXXXXXPGKGEIRACRQWRTGPGTSGPRR*AWRSPGTAQPAPRGWCRTF 576
PG P AG G+GEIRAC++WR G TS PRR*AW PGTA PA RGW RT
Sbjct: 316 PGAPRAGSRRYRSCAGTAGRGEIRACQRWRRGRRTSRPRR*AWSRPGTAPPARRGWSRTS 495
Query: 577 GSNA 588
GS+A
Sbjct: 496 GSSA 507
Score = 62.9 bits (131), Expect(2) = 1e-030
Identities = 28/57 (49%), Positives = 37/57 (64%)
Frame = +1 / +1
Query: 178 AATLSIHRFNMKPLNNSFITRVSAVFSHSSGGTCHSARRRTQRPAANGMPGRT*WGA 348
A++ IH FN+ P ++S + +HSSGGTCHSARR + + AANG RT* GA
Sbjct: 97 ASSFDIHCFNINP*SSSLLPEWPPFLNHSSGGTCHSARRSSLQLAANGTSVRT*GGA 267
Score = 39.1 bits (79), Expect(2) = 3e-033
Identities = 17/24 (70%), Positives = 21/24 (87%)
Frame = +2 / +2
Query: 536 VQPNQRRAVGVERSVVMLHEGLRY 607
VQP+QR AVGVER VV+L+E LR+
Sbjct: 455 VQPHQRGAVGVERLVVVLNERLRH 526
>gb|CV056266.1|CV056266 BNEL15G6 Barley EST endosperm library Hordeum vulgare subsp.
vulgare cDNA clone BNEL15G6 5' similar to Nuclear
transport factor 2, mRNA sequence
Length = 581
Score = 271 bits (587), Expect = 2e-072
Identities = 110/145 (75%), Positives = 128/145 (88%)
Frame = -2 / +1
Query: 625 AMDPDAVAKAFVEHYYRTFDTNRAALVGLYQETSMLTFEGQKFQGPSAIAGKLGSLPFQA 446
AMDPD+V+KAFV+HYY+TFD+NRAALVGLYQ+ SMLTFEG+KF GP+AIAGKLGSLPFQ
Sbjct: 73 AMDPDSVSKAFVQHYYQTFDSNRAALVGLYQDGSMLTFEGEKFGGPAAIAGKLGSLPFQQ 252
Query: 445 CEHQIVTVDCQPSGPQGGMLVFVSGSIRTGPEEHPIKFSQAFHLLPAAGSFFVQNDMFRL 266
C+H+I TVDCQPSGPQGG+LVFVSG+I TGP EHP+KFSQ FHLLPA GSF+VQNDMFRL
Sbjct: 253 CQHKIDTVDCQPSGPQGGVLVFVSGTITTGPGEHPLKFSQMFHLLPAGGSFYVQNDMFRL 432
Query: 265 NYG*RQPILL**RNCLRVSC*NDEY 191
NYG* + L +N +R C*N+EY
Sbjct: 433 NYG*GRAATLAAKNLIRDLC*NNEY 507
Score = 240 bits (518), Expect = 8e-063
Identities = 106/150 (70%), Positives = 113/150 (75%)
Frame = +3 / -1
Query: 186 IKYSSFQHETLKQFLHHKSIGCL*P*FRRNMSFCTKKDPAAGSKWNAWENLMGCSSGPVR 365
I+YS FQH++L +F + *P*FRRNMSFCT K P AGSKWN ENL GCS GPV
Sbjct: 512 IRYSLFQHKSLIKFFAARVAALP*P*FRRNMSFCT*KLPPAGSKWNICENLRGCSPGPVV 333
Query: 366 MEPETKTSMPPWGPDGWQSTVTI*CSQAWKGRDPSLPAMADGPWNFWPSKVSMEVSWYSP 545
M PETKT PPWGP+GWQSTV+I C WKGRDPSLPAMA GP NF PSKVSME SWYSP
Sbjct: 332 MVPETKTRTPPWGPEGWQSTVSILCWHCWKGRDPSLPAMAAGPPNFSPSKVSMEPSWYSP 153
Query: 546 TSAARLVSNVR**CSTKAFATASGSIAITS 635
TSAARL SNV **C T AF T SGSIA S
Sbjct: 152 TSAARLESNVW**C*TNAFDTESGSIASPS 63
Score = 204 bits (441), Expect = 3e-052
Identities = 93/139 (66%), Positives = 103/139 (74%)
Frame = -1 / +3
Query: 602 EGLRGALLPNVRHQPRGAGWAVPGDLHAHLRGPEVPGPVRHCRQARISPFPGLRASDRHR 423
EG+R ALLP+VR QPR AG AVPG LHAHLRG EV P RH QARISP P + A DR+R
Sbjct: 96 EGVRSALLPDVRLQPRRAGGAVPGRLHAHLRGREVRRPRRHRWQARISPLPAVPAQDRYR 275
Query: 422 RLPAIGSPGRHARLRLRFHTHRPRGAPHQVLPGIPFAAGRWVLLRAE*HVPPELWLKTAD 243
RLPA+G+PGR RLRLR H HRPR AP QVL +PFAA LLRAE*HVPPELWL+
Sbjct: 276 RLPALGAPGRRPRLRLRHHHHRPRRAPPQVLTDVPFAASWRELLRAE*HVPPELWLRKGG 455
Query: 242 TLVMKELFKGFMLKR*ILN 186
KEL +GFMLK+*I N
Sbjct: 456 HSGSKELDQGFMLKQ*ISN 512
Score = 122 bits (262), Expect(2) = 3e-033
Identities = 62/94 (65%), Positives = 67/94 (71%)
Frame = +2 / -3
Query: 185 H*VFIVST*NP*TIPSSQEYRLSLAIVQAEHVILHEEGPSGRQQMECLGELDGVLLGAGA 364
H +FIVST* P + Q R SL IVQAEHVILH E PS QQME L EL+GVL GAG
Sbjct: 513 HSIFIVST*IPDQVLCCQSGRPSLTIVQAEHVILHVEAPSSWQQMEHL*ELEGVLAGAGG 334
Query: 365 YGTGDEDEHASLGTRWLAVDGDDLMLAGLERERS 466
G GDEDE A+LG R LAVDG DL+LA LE ERS
Sbjct: 333 DGAGDEDEDAALGPRGLAVDGIDLVLALLEGERS 232
Score = 90.4 bits (191), Expect(2) = 1e-030
Identities = 37/64 (57%), Positives = 41/64 (64%)
Frame = +1 / -2
Query: 397 PGDPMAGXXXXXXXXXXPGKGEIRACRQWRTGPGTSGPRR*AWRSPGTAQPAPRGWCRTF 576
PG P AG G+GEIRAC++WR G TS PRR*AW PGTA PA RGW RT
Sbjct: 301 PGAPRAGSRRYRSCAGTAGRGEIRACQRWRRGRRTSRPRR*AWSRPGTAPPARRGWSRTS 122
Query: 577 GSNA 588
GS+A
Sbjct: 121 GSSA 110
Score = 62.9 bits (131), Expect(2) = 1e-030
Identities = 28/57 (49%), Positives = 37/57 (64%)
Frame = +1 / -2
Query: 178 AATLSIHRFNMKPLNNSFITRVSAVFSHSSGGTCHSARRRTQRPAANGMPGRT*WGA 348
A++ IH FN+ P ++S + +HSSGGTCHSARR + + AANG RT* GA
Sbjct: 520 ASSFDIHCFNINP*SSSLLPEWPPFLNHSSGGTCHSARRSSLQLAANGTSVRT*GGA 350
Score = 39.1 bits (79), Expect(2) = 3e-033
Identities = 17/24 (70%), Positives = 21/24 (87%)
Frame = +2 / -3
Query: 536 VQPNQRRAVGVERSVVMLHEGLRY 607
VQP+QR AVGVER VV+L+E LR+
Sbjct: 162 VQPHQRGAVGVERLVVVLNERLRH 91
>gb|CV056531.1|CV056531 BNEL18H1 Barley EST endosperm library Hordeum vulgare subsp.
vulgare cDNA clone BNEL18H1 5' similar to Nuclear
transport factor 2, mRNA sequence
Length = 596
Score = 271 bits (587), Expect = 2e-072
Identities = 110/145 (75%), Positives = 128/145 (88%)
Frame = -2 / +2
Query: 625 AMDPDAVAKAFVEHYYRTFDTNRAALVGLYQETSMLTFEGQKFQGPSAIAGKLGSLPFQA 446
AMDPD+V+KAFV+HYY+TFD+NRAALVGLYQ+ SMLTFEG+KF GP+AIAGKLGSLPFQ
Sbjct: 71 AMDPDSVSKAFVQHYYQTFDSNRAALVGLYQDGSMLTFEGEKFGGPAAIAGKLGSLPFQQ 250
Query: 445 CEHQIVTVDCQPSGPQGGMLVFVSGSIRTGPEEHPIKFSQAFHLLPAAGSFFVQNDMFRL 266
C+H+I TVDCQPSGPQGG+LVFVSG+I TGP EHP+KFSQ FHLLPA GSF+VQNDMFRL
Sbjct: 251 CQHKIDTVDCQPSGPQGGVLVFVSGTITTGPGEHPLKFSQMFHLLPAGGSFYVQNDMFRL 430
Query: 265 NYG*RQPILL**RNCLRVSC*NDEY 191
NYG* + L +N +R C*N+EY
Sbjct: 431 NYG*GRAATLAAKNLIRDLC*NNEY 505
Score = 240 bits (518), Expect = 8e-063
Identities = 106/150 (70%), Positives = 113/150 (75%)
Frame = +3 / -3
Query: 186 IKYSSFQHETLKQFLHHKSIGCL*P*FRRNMSFCTKKDPAAGSKWNAWENLMGCSSGPVR 365
I+YS FQH++L +F + *P*FRRNMSFCT K P AGSKWN ENL GCS GPV
Sbjct: 510 IRYSLFQHKSLIKFFAARVAALP*P*FRRNMSFCT*KLPPAGSKWNICENLRGCSPGPVV 331
Query: 366 MEPETKTSMPPWGPDGWQSTVTI*CSQAWKGRDPSLPAMADGPWNFWPSKVSMEVSWYSP 545
M PETKT PPWGP+GWQSTV+I C WKGRDPSLPAMA GP NF PSKVSME SWYSP
Sbjct: 330 MVPETKTRTPPWGPEGWQSTVSILCWHCWKGRDPSLPAMAAGPPNFSPSKVSMEPSWYSP 151
Query: 546 TSAARLVSNVR**CSTKAFATASGSIAITS 635
TSAARL SNV **C T AF T SGSIA S
Sbjct: 150 TSAARLESNVW**C*TNAFDTESGSIASPS 61
Score = 204 bits (441), Expect = 3e-052
Identities = 93/139 (66%), Positives = 103/139 (74%)
Frame = -1 / +1
Query: 602 EGLRGALLPNVRHQPRGAGWAVPGDLHAHLRGPEVPGPVRHCRQARISPFPGLRASDRHR 423
EG+R ALLP+VR QPR AG AVPG LHAHLRG EV P RH QARISP P + A DR+R
Sbjct: 94 EGVRSALLPDVRLQPRRAGGAVPGRLHAHLRGREVRRPRRHRWQARISPLPAVPAQDRYR 273
Query: 422 RLPAIGSPGRHARLRLRFHTHRPRGAPHQVLPGIPFAAGRWVLLRAE*HVPPELWLKTAD 243
RLPA+G+PGR RLRLR H HRPR AP QVL +PFAA LLRAE*HVPPELWL+
Sbjct: 274 RLPALGAPGRRPRLRLRHHHHRPRRAPPQVLTDVPFAASWRELLRAE*HVPPELWLRKGG 453
Query: 242 TLVMKELFKGFMLKR*ILN 186
KEL +GFMLK+*I N
Sbjct: 454 HSGSKELDQGFMLKQ*ISN 510
Score = 122 bits (262), Expect(2) = 3e-033
Identities = 62/94 (65%), Positives = 67/94 (71%)
Frame = +2 / -2
Query: 185 H*VFIVST*NP*TIPSSQEYRLSLAIVQAEHVILHEEGPSGRQQMECLGELDGVLLGAGA 364
H +FIVST* P + Q R SL IVQAEHVILH E PS QQME L EL+GVL GAG
Sbjct: 511 HSIFIVST*IPDQVLCCQSGRPSLTIVQAEHVILHVEAPSSWQQMEHL*ELEGVLAGAGG 332
Query: 365 YGTGDEDEHASLGTRWLAVDGDDLMLAGLERERS 466
G GDEDE A+LG R LAVDG DL+LA LE ERS
Sbjct: 331 DGAGDEDEDAALGPRGLAVDGIDLVLALLEGERS 230
Score = 90.4 bits (191), Expect(2) = 1e-030
Identities = 37/64 (57%), Positives = 41/64 (64%)
Frame = +1 / -1
Query: 397 PGDPMAGXXXXXXXXXXPGKGEIRACRQWRTGPGTSGPRR*AWRSPGTAQPAPRGWCRTF 576
PG P AG G+GEIRAC++WR G TS PRR*AW PGTA PA RGW RT
Sbjct: 299 PGAPRAGSRRYRSCAGTAGRGEIRACQRWRRGRRTSRPRR*AWSRPGTAPPARRGWSRTS 120
Query: 577 GSNA 588
GS+A
Sbjct: 119 GSSA 108
Score = 62.9 bits (131), Expect(2) = 1e-030
Identities = 28/57 (49%), Positives = 37/57 (64%)
Frame = +1 / -1
Query: 178 AATLSIHRFNMKPLNNSFITRVSAVFSHSSGGTCHSARRRTQRPAANGMPGRT*WGA 348
A++ IH FN+ P ++S + +HSSGGTCHSARR + + AANG RT* GA
Sbjct: 518 ASSFDIHCFNINP*SSSLLPEWPPFLNHSSGGTCHSARRSSLQLAANGTSVRT*GGA 348
Score = 39.1 bits (79), Expect(2) = 3e-033
Identities = 17/24 (70%), Positives = 21/24 (87%)
Frame = +2 / -2
Query: 536 VQPNQRRAVGVERSVVMLHEGLRY 607
VQP+QR AVGVER VV+L+E LR+
Sbjct: 160 VQPHQRGAVGVERLVVVLNERLRH 89
>gb|CV057063.1|CV057063 BNEL23f12 Barley EST endosperm library Hordeum vulgare subsp.
vulgare cDNA clone BNEL23f12 5' similar to Nuclear
transport factor 2, mRNA sequence
Length = 610
Score = 271 bits (587), Expect = 2e-072
Identities = 110/145 (75%), Positives = 128/145 (88%)
Frame = -2 / +2
Query: 625 AMDPDAVAKAFVEHYYRTFDTNRAALVGLYQETSMLTFEGQKFQGPSAIAGKLGSLPFQA 446
AMDPD+V+KAFV+HYY+TFD+NRAALVGLYQ+ SMLTFEG+KF GP+AIAGKLGSLPFQ
Sbjct: 80 AMDPDSVSKAFVQHYYQTFDSNRAALVGLYQDGSMLTFEGEKFGGPAAIAGKLGSLPFQQ 259
Query: 445 CEHQIVTVDCQPSGPQGGMLVFVSGSIRTGPEEHPIKFSQAFHLLPAAGSFFVQNDMFRL 266
C+H+I TVDCQPSGPQGG+LVFVSG+I TGP EHP+KFSQ FHLLPA GSF+VQNDMFRL
Sbjct: 260 CQHKIDTVDCQPSGPQGGVLVFVSGTITTGPGEHPLKFSQMFHLLPAGGSFYVQNDMFRL 439
Query: 265 NYG*RQPILL**RNCLRVSC*NDEY 191
NYG* + L +N +R C*N+EY
Sbjct: 440 NYG*GRAATLAAKNLIRDLC*NNEY 514
Score = 240 bits (518), Expect = 8e-063
Identities = 106/150 (70%), Positives = 113/150 (75%)
Frame = +3 / -2
Query: 186 IKYSSFQHETLKQFLHHKSIGCL*P*FRRNMSFCTKKDPAAGSKWNAWENLMGCSSGPVR 365
I+YS FQH++L +F + *P*FRRNMSFCT K P AGSKWN ENL GCS GPV
Sbjct: 519 IRYSLFQHKSLIKFFAARVAALP*P*FRRNMSFCT*KLPPAGSKWNICENLRGCSPGPVV 340
Query: 366 MEPETKTSMPPWGPDGWQSTVTI*CSQAWKGRDPSLPAMADGPWNFWPSKVSMEVSWYSP 545
M PETKT PPWGP+GWQSTV+I C WKGRDPSLPAMA GP NF PSKVSME SWYSP
Sbjct: 339 MVPETKTRTPPWGPEGWQSTVSILCWHCWKGRDPSLPAMAAGPPNFSPSKVSMEPSWYSP 160
Query: 546 TSAARLVSNVR**CSTKAFATASGSIAITS 635
TSAARL SNV **C T AF T SGSIA S
Sbjct: 159 TSAARLESNVW**C*TNAFDTESGSIASPS 70
Score = 204 bits (441), Expect = 3e-052
Identities = 93/139 (66%), Positives = 103/139 (74%)
Frame = -1 / +1
Query: 602 EGLRGALLPNVRHQPRGAGWAVPGDLHAHLRGPEVPGPVRHCRQARISPFPGLRASDRHR 423
EG+R ALLP+VR QPR AG AVPG LHAHLRG EV P RH QARISP P + A DR+R
Sbjct: 103 EGVRSALLPDVRLQPRRAGGAVPGRLHAHLRGREVRRPRRHRWQARISPLPAVPAQDRYR 282
Query: 422 RLPAIGSPGRHARLRLRFHTHRPRGAPHQVLPGIPFAAGRWVLLRAE*HVPPELWLKTAD 243
RLPA+G+PGR RLRLR H HRPR AP QVL +PFAA LLRAE*HVPPELWL+
Sbjct: 283 RLPALGAPGRRPRLRLRHHHHRPRRAPPQVLTDVPFAASWRELLRAE*HVPPELWLRKGG 462
Query: 242 TLVMKELFKGFMLKR*ILN 186
KEL +GFMLK+*I N
Sbjct: 463 HSGSKELDQGFMLKQ*ISN 519
Score = 122 bits (262), Expect(2) = 3e-033
Identities = 62/94 (65%), Positives = 67/94 (71%)
Frame = +2 / -1
Query: 185 H*VFIVST*NP*TIPSSQEYRLSLAIVQAEHVILHEEGPSGRQQMECLGELDGVLLGAGA 364
H +FIVST* P + Q R SL IVQAEHVILH E PS QQME L EL+GVL GAG
Sbjct: 520 HSIFIVST*IPDQVLCCQSGRPSLTIVQAEHVILHVEAPSSWQQMEHL*ELEGVLAGAGG 341
Query: 365 YGTGDEDEHASLGTRWLAVDGDDLMLAGLERERS 466
G GDEDE A+LG R LAVDG DL+LA LE ERS
Sbjct: 340 DGAGDEDEDAALGPRGLAVDGIDLVLALLEGERS 239
Score = 90.4 bits (191), Expect(2) = 1e-030
Identities = 37/64 (57%), Positives = 41/64 (64%)
Frame = +1 / -3
Query: 397 PGDPMAGXXXXXXXXXXPGKGEIRACRQWRTGPGTSGPRR*AWRSPGTAQPAPRGWCRTF 576
PG P AG G+GEIRAC++WR G TS PRR*AW PGTA PA RGW RT
Sbjct: 308 PGAPRAGSRRYRSCAGTAGRGEIRACQRWRRGRRTSRPRR*AWSRPGTAPPARRGWSRTS 129
Query: 577 GSNA 588
GS+A
Sbjct: 128 GSSA 117
Score = 62.9 bits (131), Expect(2) = 1e-030
Identities = 28/57 (49%), Positives = 37/57 (64%)
Frame = +1 / -3
Query: 178 AATLSIHRFNMKPLNNSFITRVSAVFSHSSGGTCHSARRRTQRPAANGMPGRT*WGA 348
A++ IH FN+ P ++S + +HSSGGTCHSARR + + AANG RT* GA
Sbjct: 527 ASSFDIHCFNINP*SSSLLPEWPPFLNHSSGGTCHSARRSSLQLAANGTSVRT*GGA 357
Score = 39.1 bits (79), Expect(2) = 3e-033
Identities = 17/24 (70%), Positives = 21/24 (87%)
Frame = +2 / -1
Query: 536 VQPNQRRAVGVERSVVMLHEGLRY 607
VQP+QR AVGVER VV+L+E LR+
Sbjct: 169 VQPHQRGAVGVERLVVVLNERLRH 98
>gb|CV058783.1|CV058783 BNEL40h1 Barley EST endosperm library Hordeum vulgare subsp.
vulgare cDNA clone BNEL40h1 5' similar to Nuclear
transport factor 2, mRNA sequence
Length = 598
Score = 271 bits (587), Expect = 2e-072
Identities = 110/145 (75%), Positives = 128/145 (88%)
Frame = -2 / +1
Query: 625 AMDPDAVAKAFVEHYYRTFDTNRAALVGLYQETSMLTFEGQKFQGPSAIAGKLGSLPFQA 446
AMDPD+V+KAFV+HYY+TFD+NRAALVGLYQ+ SMLTFEG+KF GP+AIAGKLGSLPFQ
Sbjct: 79 AMDPDSVSKAFVQHYYQTFDSNRAALVGLYQDGSMLTFEGEKFGGPAAIAGKLGSLPFQQ 258
Query: 445 CEHQIVTVDCQPSGPQGGMLVFVSGSIRTGPEEHPIKFSQAFHLLPAAGSFFVQNDMFRL 266
C+H+I TVDCQPSGPQGG+LVFVSG+I TGP EHP+KFSQ FHLLPA GSF+VQNDMFRL
Sbjct: 259 CQHKIDTVDCQPSGPQGGVLVFVSGTITTGPGEHPLKFSQMFHLLPAGGSFYVQNDMFRL 438
Query: 265 NYG*RQPILL**RNCLRVSC*NDEY 191
NYG* + L +N +R C*N+EY
Sbjct: 439 NYG*GRAATLAAKNLIRDLC*NNEY 513
Score = 240 bits (518), Expect = 8e-063
Identities = 106/150 (70%), Positives = 113/150 (75%)
Frame = +3 / -3
Query: 186 IKYSSFQHETLKQFLHHKSIGCL*P*FRRNMSFCTKKDPAAGSKWNAWENLMGCSSGPVR 365
I+YS FQH++L +F + *P*FRRNMSFCT K P AGSKWN ENL GCS GPV
Sbjct: 518 IRYSLFQHKSLIKFFAARVAALP*P*FRRNMSFCT*KLPPAGSKWNICENLRGCSPGPVV 339
Query: 366 MEPETKTSMPPWGPDGWQSTVTI*CSQAWKGRDPSLPAMADGPWNFWPSKVSMEVSWYSP 545
M PETKT PPWGP+GWQSTV+I C WKGRDPSLPAMA GP NF PSKVSME SWYSP
Sbjct: 338 MVPETKTRTPPWGPEGWQSTVSILCWHCWKGRDPSLPAMAAGPPNFSPSKVSMEPSWYSP 159
Query: 546 TSAARLVSNVR**CSTKAFATASGSIAITS 635
TSAARL SNV **C T AF T SGSIA S
Sbjct: 158 TSAARLESNVW**C*TNAFDTESGSIASPS 69
Score = 204 bits (441), Expect = 3e-052
Identities = 93/139 (66%), Positives = 103/139 (74%)
Frame = -1 / +3
Query: 602 EGLRGALLPNVRHQPRGAGWAVPGDLHAHLRGPEVPGPVRHCRQARISPFPGLRASDRHR 423
EG+R ALLP+VR QPR AG AVPG LHAHLRG EV P RH QARISP P + A DR+R
Sbjct: 102 EGVRSALLPDVRLQPRRAGGAVPGRLHAHLRGREVRRPRRHRWQARISPLPAVPAQDRYR 281
Query: 422 RLPAIGSPGRHARLRLRFHTHRPRGAPHQVLPGIPFAAGRWVLLRAE*HVPPELWLKTAD 243
RLPA+G+PGR RLRLR H HRPR AP QVL +PFAA LLRAE*HVPPELWL+
Sbjct: 282 RLPALGAPGRRPRLRLRHHHHRPRRAPPQVLTDVPFAASWRELLRAE*HVPPELWLRKGG 461
Query: 242 TLVMKELFKGFMLKR*ILN 186
KEL +GFMLK+*I N
Sbjct: 462 HSGSKELDQGFMLKQ*ISN 518
Score = 122 bits (262), Expect(2) = 3e-033
Identities = 62/94 (65%), Positives = 67/94 (71%)
Frame = +2 / -2
Query: 185 H*VFIVST*NP*TIPSSQEYRLSLAIVQAEHVILHEEGPSGRQQMECLGELDGVLLGAGA 364
H +FIVST* P + Q R SL IVQAEHVILH E PS QQME L EL+GVL GAG
Sbjct: 519 HSIFIVST*IPDQVLCCQSGRPSLTIVQAEHVILHVEAPSSWQQMEHL*ELEGVLAGAGG 340
Query: 365 YGTGDEDEHASLGTRWLAVDGDDLMLAGLERERS 466
G GDEDE A+LG R LAVDG DL+LA LE ERS
Sbjct: 339 DGAGDEDEDAALGPRGLAVDGIDLVLALLEGERS 238
Score = 90.4 bits (191), Expect(2) = 1e-030
Identities = 37/64 (57%), Positives = 41/64 (64%)
Frame = +1 / -1
Query: 397 PGDPMAGXXXXXXXXXXPGKGEIRACRQWRTGPGTSGPRR*AWRSPGTAQPAPRGWCRTF 576
PG P AG G+GEIRAC++WR G TS PRR*AW PGTA PA RGW RT
Sbjct: 307 PGAPRAGSRRYRSCAGTAGRGEIRACQRWRRGRRTSRPRR*AWSRPGTAPPARRGWSRTS 128
Query: 577 GSNA 588
GS+A
Sbjct: 127 GSSA 116
Score = 62.9 bits (131), Expect(2) = 1e-030
Identities = 28/57 (49%), Positives = 37/57 (64%)
Frame = +1 / -1
Query: 178 AATLSIHRFNMKPLNNSFITRVSAVFSHSSGGTCHSARRRTQRPAANGMPGRT*WGA 348
A++ IH FN+ P ++S + +HSSGGTCHSARR + + AANG RT* GA
Sbjct: 526 ASSFDIHCFNINP*SSSLLPEWPPFLNHSSGGTCHSARRSSLQLAANGTSVRT*GGA 356
Score = 39.1 bits (79), Expect(2) = 3e-033
Identities = 17/24 (70%), Positives = 21/24 (87%)
Frame = +2 / -2
Query: 536 VQPNQRRAVGVERSVVMLHEGLRY 607
VQP+QR AVGVER VV+L+E LR+
Sbjct: 168 VQPHQRGAVGVERLVVVLNERLRH 97
>gb|CV058787.1|CV058787 BNEL40h2 Barley EST endosperm library Hordeum vulgare subsp.
vulgare cDNA clone BNEL40h2 5' similar to Nuclear
transport factor 2, mRNA sequence
Length = 585
Score = 271 bits (587), Expect = 2e-072
Identities = 110/145 (75%), Positives = 128/145 (88%)
Frame = -2 / -3
Query: 625 AMDPDAVAKAFVEHYYRTFDTNRAALVGLYQETSMLTFEGQKFQGPSAIAGKLGSLPFQA 446
AMDPD+V+KAFV+HYY+TFD+NRAALVGLYQ+ SMLTFEG+KF GP+AIAGKLGSLPFQ
Sbjct: 532 AMDPDSVSKAFVQHYYQTFDSNRAALVGLYQDGSMLTFEGEKFGGPAAIAGKLGSLPFQQ 353
Query: 445 CEHQIVTVDCQPSGPQGGMLVFVSGSIRTGPEEHPIKFSQAFHLLPAAGSFFVQNDMFRL 266
C+H+I TVDCQPSGPQGG+LVFVSG+I TGP EHP+KFSQ FHLLPA GSF+VQNDMFRL
Sbjct: 352 CQHKIDTVDCQPSGPQGGVLVFVSGTITTGPGEHPLKFSQMFHLLPAGGSFYVQNDMFRL 173
Query: 265 NYG*RQPILL**RNCLRVSC*NDEY 191
NYG* + L +N +R C*N+EY
Sbjct: 172 NYG*GRAATLAAKNLIRDLC*NNEY 98
Score = 240 bits (518), Expect = 8e-063
Identities = 106/150 (70%), Positives = 113/150 (75%)
Frame = +3 / +3
Query: 186 IKYSSFQHETLKQFLHHKSIGCL*P*FRRNMSFCTKKDPAAGSKWNAWENLMGCSSGPVR 365
I+YS FQH++L +F + *P*FRRNMSFCT K P AGSKWN ENL GCS GPV
Sbjct: 93 IRYSLFQHKSLIKFFAARVAALP*P*FRRNMSFCT*KLPPAGSKWNICENLRGCSPGPVV 272
Query: 366 MEPETKTSMPPWGPDGWQSTVTI*CSQAWKGRDPSLPAMADGPWNFWPSKVSMEVSWYSP 545
M PETKT PPWGP+GWQSTV+I C WKGRDPSLPAMA GP NF PSKVSME SWYSP
Sbjct: 273 MVPETKTRTPPWGPEGWQSTVSILCWHCWKGRDPSLPAMAAGPPNFSPSKVSMEPSWYSP 452
Query: 546 TSAARLVSNVR**CSTKAFATASGSIAITS 635
TSAARL SNV **C T AF T SGSIA S
Sbjct: 453 TSAARLESNVW**C*TNAFDTESGSIASPS 542
Score = 204 bits (441), Expect = 3e-052
Identities = 93/139 (66%), Positives = 103/139 (74%)
Frame = -1 / -2
Query: 602 EGLRGALLPNVRHQPRGAGWAVPGDLHAHLRGPEVPGPVRHCRQARISPFPGLRASDRHR 423
EG+R ALLP+VR QPR AG AVPG LHAHLRG EV P RH QARISP P + A DR+R
Sbjct: 509 EGVRSALLPDVRLQPRRAGGAVPGRLHAHLRGREVRRPRRHRWQARISPLPAVPAQDRYR 330
Query: 422 RLPAIGSPGRHARLRLRFHTHRPRGAPHQVLPGIPFAAGRWVLLRAE*HVPPELWLKTAD 243
RLPA+G+PGR RLRLR H HRPR AP QVL +PFAA LLRAE*HVPPELWL+
Sbjct: 329 RLPALGAPGRRPRLRLRHHHHRPRRAPPQVLTDVPFAASWRELLRAE*HVPPELWLRKGG 150
Query: 242 TLVMKELFKGFMLKR*ILN 186
KEL +GFMLK+*I N
Sbjct: 149 HSGSKELDQGFMLKQ*ISN 93
Score = 122 bits (262), Expect(2) = 3e-033
Identities = 62/94 (65%), Positives = 67/94 (71%)
Frame = +2 / +2
Query: 185 H*VFIVST*NP*TIPSSQEYRLSLAIVQAEHVILHEEGPSGRQQMECLGELDGVLLGAGA 364
H +FIVST* P + Q R SL IVQAEHVILH E PS QQME L EL+GVL GAG
Sbjct: 92 HSIFIVST*IPDQVLCCQSGRPSLTIVQAEHVILHVEAPSSWQQMEHL*ELEGVLAGAGG 271
Query: 365 YGTGDEDEHASLGTRWLAVDGDDLMLAGLERERS 466
G GDEDE A+LG R LAVDG DL+LA LE ERS
Sbjct: 272 DGAGDEDEDAALGPRGLAVDGIDLVLALLEGERS 373
Score = 90.4 bits (191), Expect(2) = 1e-030
Identities = 37/64 (57%), Positives = 41/64 (64%)
Frame = +1 / +1
Query: 397 PGDPMAGXXXXXXXXXXPGKGEIRACRQWRTGPGTSGPRR*AWRSPGTAQPAPRGWCRTF 576
PG P AG G+GEIRAC++WR G TS PRR*AW PGTA PA RGW RT
Sbjct: 304 PGAPRAGSRRYRSCAGTAGRGEIRACQRWRRGRRTSRPRR*AWSRPGTAPPARRGWSRTS 483
Query: 577 GSNA 588
GS+A
Sbjct: 484 GSSA 495
Score = 62.9 bits (131), Expect(2) = 1e-030
Identities = 28/57 (49%), Positives = 37/57 (64%)
Frame = +1 / +1
Query: 178 AATLSIHRFNMKPLNNSFITRVSAVFSHSSGGTCHSARRRTQRPAANGMPGRT*WGA 348
A++ IH FN+ P ++S + +HSSGGTCHSARR + + AANG RT* GA
Sbjct: 85 ASSFDIHCFNINP*SSSLLPEWPPFLNHSSGGTCHSARRSSLQLAANGTSVRT*GGA 255
Score = 39.1 bits (79), Expect(2) = 3e-033
Identities = 17/24 (70%), Positives = 21/24 (87%)
Frame = +2 / +2
Query: 536 VQPNQRRAVGVERSVVMLHEGLRY 607
VQP+QR AVGVER VV+L+E LR+
Sbjct: 443 VQPHQRGAVGVERLVVVLNERLRH 514
>gb|CV060449.1|CV060449 BNEL58c2 Barley EST endosperm library Hordeum vulgare subsp.
vulgare cDNA clone BNEL58c2 5' similar to Nuclear
transport factor 2, mRNA sequence
Length = 535
Score = 271 bits (587), Expect = 2e-072
Identities = 110/145 (75%), Positives = 128/145 (88%)
Frame = -2 / +3
Query: 625 AMDPDAVAKAFVEHYYRTFDTNRAALVGLYQETSMLTFEGQKFQGPSAIAGKLGSLPFQA 446
AMDPD+V+KAFV+HYY+TFD+NRAALVGLYQ+ SMLTFEG+KF GP+AIAGKLGSLPFQ
Sbjct: 69 AMDPDSVSKAFVQHYYQTFDSNRAALVGLYQDGSMLTFEGEKFGGPAAIAGKLGSLPFQQ 248
Query: 445 CEHQIVTVDCQPSGPQGGMLVFVSGSIRTGPEEHPIKFSQAFHLLPAAGSFFVQNDMFRL 266
C+H+I TVDCQPSGPQGG+LVFVSG+I TGP EHP+KFSQ FHLLPA GSF+VQNDMFRL
Sbjct: 249 CQHKIDTVDCQPSGPQGGVLVFVSGTITTGPGEHPLKFSQMFHLLPAGGSFYVQNDMFRL 428
Query: 265 NYG*RQPILL**RNCLRVSC*NDEY 191
NYG* + L +N +R C*N+EY
Sbjct: 429 NYG*GRAATLAAKNLIRDLC*NNEY 503
Score = 240 bits (518), Expect = 8e-063
Identities = 106/150 (70%), Positives = 113/150 (75%)
Frame = +3 / -1
Query: 186 IKYSSFQHETLKQFLHHKSIGCL*P*FRRNMSFCTKKDPAAGSKWNAWENLMGCSSGPVR 365
I+YS FQH++L +F + *P*FRRNMSFCT K P AGSKWN ENL GCS GPV
Sbjct: 508 IRYSLFQHKSLIKFFAARVAALP*P*FRRNMSFCT*KLPPAGSKWNICENLXGCSPGPVV 329
Query: 366 MEPETKTSMPPWGPDGWQSTVTI*CSQAWKGRDPSLPAMADGPWNFWPSKVSMEVSWYSP 545
M PETKT PPWGP+GWQSTV+I C WKGRDPSLPAMA GP NF PSKVSME SWYSP
Sbjct: 328 MVPETKTRTPPWGPEGWQSTVSILCWHCWKGRDPSLPAMAAGPPNFSPSKVSMEPSWYSP 149
Query: 546 TSAARLVSNVR**CSTKAFATASGSIAITS 635
TSAARL SNV **C T AF T SGSIA S
Sbjct: 148 TSAARLESNVW**C*TNAFDTESGSIASPS 59
Score = 205 bits (442), Expect = 2e-052
Identities = 93/139 (66%), Positives = 103/139 (74%)
Frame = -1 / +2
Query: 602 EGLRGALLPNVRHQPRGAGWAVPGDLHAHLRGPEVPGPVRHCRQARISPFPGLRASDRHR 423
EG+R ALLP+VR QPR AG AVPG LHAHLRG EV P RH QARISP P + A DR+R
Sbjct: 92 EGVRSALLPDVRLQPRRAGGAVPGRLHAHLRGREVRRPRRHRWQARISPLPAVPAQDRYR 271
Query: 422 RLPAIGSPGRHARLRLRFHTHRPRGAPHQVLPGIPFAAGRWVLLRAE*HVPPELWLKTAD 243
RLPA+G+PGR RLRLR H HRPR AP QVL +PFAA LLRAE*HVPPELWL+
Sbjct: 272 RLPALGAPGRRPRLRLRHHHHRPRRAPXQVLTDVPFAASWRELLRAE*HVPPELWLRKGG 451
Query: 242 TLVMKELFKGFMLKR*ILN 186
KEL +GFMLK+*I N
Sbjct: 452 HSGSKELDQGFMLKQ*ISN 508
Score = 119 bits (255), Expect(2) = 2e-032
Identities = 61/94 (64%), Positives = 66/94 (70%)
Frame = +2 / -3
Query: 185 H*VFIVST*NP*TIPSSQEYRLSLAIVQAEHVILHEEGPSGRQQMECLGELDGVLLGAGA 364
H +FIVST* P + Q R SL IVQAEHVILH E PS QQME L EL+ VL GAG
Sbjct: 509 HSIFIVST*IPDQVLCCQSGRPSLTIVQAEHVILHVEAPSSWQQMEHL*ELEXVLAGAGG 330
Query: 365 YGTGDEDEHASLGTRWLAVDGDDLMLAGLERERS 466
G GDEDE A+LG R LAVDG DL+LA LE ERS
Sbjct: 329 DGAGDEDEDAALGPRGLAVDGIDLVLALLEGERS 228
Score = 90.4 bits (191), Expect(2) = 1e-030
Identities = 37/64 (57%), Positives = 41/64 (64%)
Frame = +1 / -2
Query: 397 PGDPMAGXXXXXXXXXXPGKGEIRACRQWRTGPGTSGPRR*AWRSPGTAQPAPRGWCRTF 576
PG P AG G+GEIRAC++WR G TS PRR*AW PGTA PA RGW RT
Sbjct: 297 PGAPRAGSRRYRSCAGTAGRGEIRACQRWRRGRRTSRPRR*AWSRPGTAPPARRGWSRTS 118
Query: 577 GSNA 588
GS+A
Sbjct: 117 GSSA 106
Score = 62.9 bits (131), Expect(2) = 1e-030
Identities = 28/57 (49%), Positives = 37/57 (64%)
Frame = +1 / -2
Query: 178 AATLSIHRFNMKPLNNSFITRVSAVFSHSSGGTCHSARRRTQRPAANGMPGRT*WGA 348
A++ IH FN+ P ++S + +HSSGGTCHSARR + + AANG RT* GA
Sbjct: 516 ASSFDIHCFNINP*SSSLLPEWPPFLNHSSGGTCHSARRSSLQLAANGTSVRT*XGA 346
Score = 39.1 bits (79), Expect(2) = 2e-032
Identities = 17/24 (70%), Positives = 21/24 (87%)
Frame = +2 / -3
Query: 536 VQPNQRRAVGVERSVVMLHEGLRY 607
VQP+QR AVGVER VV+L+E LR+
Sbjct: 158 VQPHQRGAVGVERLVVVLNERLRH 87
>gb|CV061757.1|CV061757 BNEL71f1 Barley EST endosperm library Hordeum vulgare subsp.
vulgare cDNA clone BNEL71f1 5' similar to Nuclear
transport factor 2, mRNA sequence
Length = 541
Score = 271 bits (587), Expect = 2e-072
Identities = 110/145 (75%), Positives = 128/145 (88%)
Frame = -2 / +3
Query: 625 AMDPDAVAKAFVEHYYRTFDTNRAALVGLYQETSMLTFEGQKFQGPSAIAGKLGSLPFQA 446
AMDPD+V+KAFV+HYY+TFD+NRAALVGLYQ+ SMLTFEG+KF GP+AIAGKLGSLPFQ
Sbjct: 69 AMDPDSVSKAFVQHYYQTFDSNRAALVGLYQDGSMLTFEGEKFGGPAAIAGKLGSLPFQQ 248
Query: 445 CEHQIVTVDCQPSGPQGGMLVFVSGSIRTGPEEHPIKFSQAFHLLPAAGSFFVQNDMFRL 266
C+H+I TVDCQPSGPQGG+LVFVSG+I TGP EHP+KFSQ FHLLPA GSF+VQNDMFRL
Sbjct: 249 CQHKIDTVDCQPSGPQGGVLVFVSGTITTGPGEHPLKFSQMFHLLPAGGSFYVQNDMFRL 428
Query: 265 NYG*RQPILL**RNCLRVSC*NDEY 191
NYG* + L +N +R C*N+EY
Sbjct: 429 NYG*GRAATLAAKNLIRDLC*NNEY 503
Score = 240 bits (518), Expect = 8e-063
Identities = 106/150 (70%), Positives = 113/150 (75%)
Frame = +3 / -1
Query: 186 IKYSSFQHETLKQFLHHKSIGCL*P*FRRNMSFCTKKDPAAGSKWNAWENLMGCSSGPVR 365
I+YS FQH++L +F + *P*FRRNMSFCT K P AGSKWN ENL GCS GPV
Sbjct: 508 IRYSLFQHKSLIKFFAARVAALP*P*FRRNMSFCT*KLPPAGSKWNICENLRGCSPGPVV 329
Query: 366 MEPETKTSMPPWGPDGWQSTVTI*CSQAWKGRDPSLPAMADGPWNFWPSKVSMEVSWYSP 545
M PETKT PPWGP+GWQSTV+I C WKGRDPSLPAMA GP NF PSKVSME SWYSP
Sbjct: 328 MVPETKTRTPPWGPEGWQSTVSILCWHCWKGRDPSLPAMAAGPPNFSPSKVSMEPSWYSP 149
Query: 546 TSAARLVSNVR**CSTKAFATASGSIAITS 635
TSAARL SNV **C T AF T SGSIA S
Sbjct: 148 TSAARLESNVW**C*TNAFDTESGSIASPS 59
Score = 204 bits (441), Expect = 3e-052
Identities = 93/139 (66%), Positives = 103/139 (74%)
Frame = -1 / +2
Query: 602 EGLRGALLPNVRHQPRGAGWAVPGDLHAHLRGPEVPGPVRHCRQARISPFPGLRASDRHR 423
EG+R ALLP+VR QPR AG AVPG LHAHLRG EV P RH QARISP P + A DR+R
Sbjct: 92 EGVRSALLPDVRLQPRRAGGAVPGRLHAHLRGREVRRPRRHRWQARISPLPAVPAQDRYR 271
Query: 422 RLPAIGSPGRHARLRLRFHTHRPRGAPHQVLPGIPFAAGRWVLLRAE*HVPPELWLKTAD 243
RLPA+G+PGR RLRLR H HRPR AP QVL +PFAA LLRAE*HVPPELWL+
Sbjct: 272 RLPALGAPGRRPRLRLRHHHHRPRRAPPQVLTDVPFAASWRELLRAE*HVPPELWLRKGG 451
Query: 242 TLVMKELFKGFMLKR*ILN 186
KEL +GFMLK+*I N
Sbjct: 452 HSGSKELDQGFMLKQ*ISN 508
Score = 122 bits (262), Expect(2) = 3e-033
Identities = 62/94 (65%), Positives = 67/94 (71%)
Frame = +2 / -3
Query: 185 H*VFIVST*NP*TIPSSQEYRLSLAIVQAEHVILHEEGPSGRQQMECLGELDGVLLGAGA 364
H +FIVST* P + Q R SL IVQAEHVILH E PS QQME L EL+GVL GAG
Sbjct: 509 HSIFIVST*IPDQVLCCQSGRPSLTIVQAEHVILHVEAPSSWQQMEHL*ELEGVLAGAGG 330
Query: 365 YGTGDEDEHASLGTRWLAVDGDDLMLAGLERERS 466
G GDEDE A+LG R LAVDG DL+LA LE ERS
Sbjct: 329 DGAGDEDEDAALGPRGLAVDGIDLVLALLEGERS 228
Score = 90.4 bits (191), Expect(2) = 1e-030
Identities = 37/64 (57%), Positives = 41/64 (64%)
Frame = +1 / -2
Query: 397 PGDPMAGXXXXXXXXXXPGKGEIRACRQWRTGPGTSGPRR*AWRSPGTAQPAPRGWCRTF 576
PG P AG G+GEIRAC++WR G TS PRR*AW PGTA PA RGW RT
Sbjct: 297 PGAPRAGSRRYRSCAGTAGRGEIRACQRWRRGRRTSRPRR*AWSRPGTAPPARRGWSRTS 118
Query: 577 GSNA 588
GS+A
Sbjct: 117 GSSA 106
Score = 62.9 bits (131), Expect(2) = 1e-030
Identities = 28/57 (49%), Positives = 37/57 (64%)
Frame = +1 / -2
Query: 178 AATLSIHRFNMKPLNNSFITRVSAVFSHSSGGTCHSARRRTQRPAANGMPGRT*WGA 348
A++ IH FN+ P ++S + +HSSGGTCHSARR + + AANG RT* GA
Sbjct: 516 ASSFDIHCFNINP*SSSLLPEWPPFLNHSSGGTCHSARRSSLQLAANGTSVRT*GGA 346
Score = 39.1 bits (79), Expect(2) = 3e-033
Identities = 17/24 (70%), Positives = 21/24 (87%)
Frame = +2 / -3
Query: 536 VQPNQRRAVGVERSVVMLHEGLRY 607
VQP+QR AVGVER VV+L+E LR+
Sbjct: 158 VQPHQRGAVGVERLVVVLNERLRH 87
>gb|CK122329.1|CK122329 BES1824102o02 BES1824 Hordeum vulgare subsp. vulgare cDNA clone
MPMGp2010O022 5-PRIME, mRNA sequence
Length = 774
Score = 271 bits (587), Expect = 2e-072
Identities = 110/145 (75%), Positives = 128/145 (88%)
Frame = -2 / +1
Query: 625 AMDPDAVAKAFVEHYYRTFDTNRAALVGLYQETSMLTFEGQKFQGPSAIAGKLGSLPFQA 446
AMDPD+V+KAFV+HYY+TFD+NRAALVGLYQ+ SMLTFEG+KF GP+AIAGKLGSLPFQ
Sbjct: 73 AMDPDSVSKAFVQHYYQTFDSNRAALVGLYQDGSMLTFEGEKFGGPAAIAGKLGSLPFQQ 252
Query: 445 CEHQIVTVDCQPSGPQGGMLVFVSGSIRTGPEEHPIKFSQAFHLLPAAGSFFVQNDMFRL 266
C+H+I TVDCQPSGPQGG+LVFVSG+I TGP EHP+KFSQ FHLLPA GSF+VQNDMFRL
Sbjct: 253 CQHKIDTVDCQPSGPQGGVLVFVSGTITTGPGEHPLKFSQMFHLLPAGGSFYVQNDMFRL 432
Query: 265 NYG*RQPILL**RNCLRVSC*NDEY 191
NYG* + L +N +R C*N+EY
Sbjct: 433 NYG*GRAATLAAKNLIRDLC*NNEY 507
Score = 240 bits (518), Expect = 8e-063
Identities = 106/150 (70%), Positives = 113/150 (75%)
Frame = +3 / -2
Query: 186 IKYSSFQHETLKQFLHHKSIGCL*P*FRRNMSFCTKKDPAAGSKWNAWENLMGCSSGPVR 365
I+YS FQH++L +F + *P*FRRNMSFCT K P AGSKWN ENL GCS GPV
Sbjct: 512 IRYSLFQHKSLIKFFAARVAALP*P*FRRNMSFCT*KLPPAGSKWNICENLRGCSPGPVV 333
Query: 366 MEPETKTSMPPWGPDGWQSTVTI*CSQAWKGRDPSLPAMADGPWNFWPSKVSMEVSWYSP 545
M PETKT PPWGP+GWQSTV+I C WKGRDPSLPAMA GP NF PSKVSME SWYSP
Sbjct: 332 MVPETKTRTPPWGPEGWQSTVSILCWHCWKGRDPSLPAMAAGPPNFSPSKVSMEPSWYSP 153
Query: 546 TSAARLVSNVR**CSTKAFATASGSIAITS 635
TSAARL SNV **C T AF T SGSIA S
Sbjct: 152 TSAARLESNVW**C*TNAFDTESGSIASPS 63
Score = 204 bits (441), Expect = 3e-052
Identities = 93/139 (66%), Positives = 103/139 (74%)
Frame = -1 / +3
Query: 602 EGLRGALLPNVRHQPRGAGWAVPGDLHAHLRGPEVPGPVRHCRQARISPFPGLRASDRHR 423
EG+R ALLP+VR QPR AG AVPG LHAHLRG EV P RH QARISP P + A DR+R
Sbjct: 96 EGVRSALLPDVRLQPRRAGGAVPGRLHAHLRGREVRRPRRHRWQARISPLPAVPAQDRYR 275
Query: 422 RLPAIGSPGRHARLRLRFHTHRPRGAPHQVLPGIPFAAGRWVLLRAE*HVPPELWLKTAD 243
RLPA+G+PGR RLRLR H HRPR AP QVL +PFAA LLRAE*HVPPELWL+
Sbjct: 276 RLPALGAPGRRPRLRLRHHHHRPRRAPPQVLTDVPFAASWRELLRAE*HVPPELWLRKGG 455
Query: 242 TLVMKELFKGFMLKR*ILN 186
KEL +GFMLK+*I N
Sbjct: 456 HSGSKELDQGFMLKQ*ISN 512
Score = 122 bits (262), Expect(2) = 3e-033
Identities = 62/94 (65%), Positives = 67/94 (71%)
Frame = +2 / -1
Query: 185 H*VFIVST*NP*TIPSSQEYRLSLAIVQAEHVILHEEGPSGRQQMECLGELDGVLLGAGA 364
H +FIVST* P + Q R SL IVQAEHVILH E PS QQME L EL+GVL GAG
Sbjct: 513 HSIFIVST*IPDQVLCCQSGRPSLTIVQAEHVILHVEAPSSWQQMEHL*ELEGVLAGAGG 334
Query: 365 YGTGDEDEHASLGTRWLAVDGDDLMLAGLERERS 466
G GDEDE A+LG R LAVDG DL+LA LE ERS
Sbjct: 333 DGAGDEDEDAALGPRGLAVDGIDLVLALLEGERS 232
Score = 90.4 bits (191), Expect(2) = 1e-030
Identities = 37/64 (57%), Positives = 41/64 (64%)
Frame = +1 / -3
Query: 397 PGDPMAGXXXXXXXXXXPGKGEIRACRQWRTGPGTSGPRR*AWRSPGTAQPAPRGWCRTF 576
PG P AG G+GEIRAC++WR G TS PRR*AW PGTA PA RGW RT
Sbjct: 301 PGAPRAGSRRYRSCAGTAGRGEIRACQRWRRGRRTSRPRR*AWSRPGTAPPARRGWSRTS 122
Query: 577 GSNA 588
GS+A
Sbjct: 121 GSSA 110
Score = 62.9 bits (131), Expect(2) = 1e-030
Identities = 28/57 (49%), Positives = 37/57 (64%)
Frame = +1 / -3
Query: 178 AATLSIHRFNMKPLNNSFITRVSAVFSHSSGGTCHSARRRTQRPAANGMPGRT*WGA 348
A++ IH FN+ P ++S + +HSSGGTCHSARR + + AANG RT* GA
Sbjct: 520 ASSFDIHCFNINP*SSSLLPEWPPFLNHSSGGTCHSARRSSLQLAANGTSVRT*GGA 350
Score = 39.1 bits (79), Expect(2) = 3e-033
Identities = 17/24 (70%), Positives = 21/24 (87%)
Frame = +2 / -1
Query: 536 VQPNQRRAVGVERSVVMLHEGLRY 607
VQP+QR AVGVER VV+L+E LR+
Sbjct: 162 VQPHQRGAVGVERLVVVLNERLRH 91
>gb|CK123815.1|CK123815 BES1824105g24 BES1824 Hordeum vulgare subsp. vulgare cDNA clone
MPMGp2010G245 5-PRIME, mRNA sequence
Length = 644
Score = 271 bits (587), Expect = 2e-072
Identities = 110/145 (75%), Positives = 128/145 (88%)
Frame = -2 / +3
Query: 625 AMDPDAVAKAFVEHYYRTFDTNRAALVGLYQETSMLTFEGQKFQGPSAIAGKLGSLPFQA 446
AMDPD+V+KAFV+HYY+TFD+NRAALVGLYQ+ SMLTFEG+KF GP+AIAGKLGSLPFQ
Sbjct: 33 AMDPDSVSKAFVQHYYQTFDSNRAALVGLYQDGSMLTFEGEKFGGPAAIAGKLGSLPFQQ 212
Query: 445 CEHQIVTVDCQPSGPQGGMLVFVSGSIRTGPEEHPIKFSQAFHLLPAAGSFFVQNDMFRL 266
C+H+I TVDCQPSGPQGG+LVFVSG+I TGP EHP+KFSQ FHLLPA GSF+VQNDMFRL
Sbjct: 213 CQHKIDTVDCQPSGPQGGVLVFVSGTITTGPGEHPLKFSQMFHLLPAGGSFYVQNDMFRL 392
Query: 265 NYG*RQPILL**RNCLRVSC*NDEY 191
NYG* + L +N +R C*N+EY
Sbjct: 393 NYG*GRAATLAAKNLIRDLC*NNEY 467
Score = 240 bits (518), Expect = 8e-063
Identities = 106/150 (70%), Positives = 113/150 (75%)
Frame = +3 / -2
Query: 186 IKYSSFQHETLKQFLHHKSIGCL*P*FRRNMSFCTKKDPAAGSKWNAWENLMGCSSGPVR 365
I+YS FQH++L +F + *P*FRRNMSFCT K P AGSKWN ENL GCS GPV
Sbjct: 472 IRYSLFQHKSLIKFFAARVAALP*P*FRRNMSFCT*KLPPAGSKWNICENLRGCSPGPVV 293
Query: 366 MEPETKTSMPPWGPDGWQSTVTI*CSQAWKGRDPSLPAMADGPWNFWPSKVSMEVSWYSP 545
M PETKT PPWGP+GWQSTV+I C WKGRDPSLPAMA GP NF PSKVSME SWYSP
Sbjct: 292 MVPETKTRTPPWGPEGWQSTVSILCWHCWKGRDPSLPAMAAGPPNFSPSKVSMEPSWYSP 113
Query: 546 TSAARLVSNVR**CSTKAFATASGSIAITS 635
TSAARL SNV **C T AF T SGSIA S
Sbjct: 112 TSAARLESNVW**C*TNAFDTESGSIASPS 23
Score = 204 bits (441), Expect = 3e-052
Identities = 93/139 (66%), Positives = 103/139 (74%)
Frame = -1 / +2
Query: 602 EGLRGALLPNVRHQPRGAGWAVPGDLHAHLRGPEVPGPVRHCRQARISPFPGLRASDRHR 423
EG+R ALLP+VR QPR AG AVPG LHAHLRG EV P RH QARISP P + A DR+R
Sbjct: 56 EGVRSALLPDVRLQPRRAGGAVPGRLHAHLRGREVRRPRRHRWQARISPLPAVPAQDRYR 235
Query: 422 RLPAIGSPGRHARLRLRFHTHRPRGAPHQVLPGIPFAAGRWVLLRAE*HVPPELWLKTAD 243
RLPA+G+PGR RLRLR H HRPR AP QVL +PFAA LLRAE*HVPPELWL+
Sbjct: 236 RLPALGAPGRRPRLRLRHHHHRPRRAPPQVLTDVPFAASWRELLRAE*HVPPELWLRKGG 415
Query: 242 TLVMKELFKGFMLKR*ILN 186
KEL +GFMLK+*I N
Sbjct: 416 HSGSKELDQGFMLKQ*ISN 472
Score = 122 bits (262), Expect(2) = 3e-033
Identities = 62/94 (65%), Positives = 67/94 (71%)
Frame = +2 / -1
Query: 185 H*VFIVST*NP*TIPSSQEYRLSLAIVQAEHVILHEEGPSGRQQMECLGELDGVLLGAGA 364
H +FIVST* P + Q R SL IVQAEHVILH E PS QQME L EL+GVL GAG
Sbjct: 473 HSIFIVST*IPDQVLCCQSGRPSLTIVQAEHVILHVEAPSSWQQMEHL*ELEGVLAGAGG 294
Query: 365 YGTGDEDEHASLGTRWLAVDGDDLMLAGLERERS 466
G GDEDE A+LG R LAVDG DL+LA LE ERS
Sbjct: 293 DGAGDEDEDAALGPRGLAVDGIDLVLALLEGERS 192
Score = 90.4 bits (191), Expect(2) = 1e-030
Identities = 37/64 (57%), Positives = 41/64 (64%)
Frame = +1 / -3
Query: 397 PGDPMAGXXXXXXXXXXPGKGEIRACRQWRTGPGTSGPRR*AWRSPGTAQPAPRGWCRTF 576
PG P AG G+GEIRAC++WR G TS PRR*AW PGTA PA RGW RT
Sbjct: 261 PGAPRAGSRRYRSCAGTAGRGEIRACQRWRRGRRTSRPRR*AWSRPGTAPPARRGWSRTS 82
Query: 577 GSNA 588
GS+A
Sbjct: 81 GSSA 70
Score = 62.9 bits (131), Expect(2) = 1e-030
Identities = 28/57 (49%), Positives = 37/57 (64%)
Frame = +1 / -3
Query: 178 AATLSIHRFNMKPLNNSFITRVSAVFSHSSGGTCHSARRRTQRPAANGMPGRT*WGA 348
A++ IH FN+ P ++S + +HSSGGTCHSARR + + AANG RT* GA
Sbjct: 480 ASSFDIHCFNINP*SSSLLPEWPPFLNHSSGGTCHSARRSSLQLAANGTSVRT*GGA 310
Score = 39.1 bits (79), Expect(2) = 3e-033
Identities = 17/24 (70%), Positives = 21/24 (87%)
Frame = +2 / -1
Query: 536 VQPNQRRAVGVERSVVMLHEGLRY 607
VQP+QR AVGVER VV+L+E LR+
Sbjct: 122 VQPHQRGAVGVERLVVVLNERLRH 51
>gb|BM371480.2|BM371480 EBma08_SQ002_O06_R maternal, 28 DPA, no treatment, cv Optic, EBma08
Hordeum vulgare subsp. vulgare cDNA clone
EBma08_SQ002_O06 5', mRNA sequence
Length = 581
Score = 270 bits (585), Expect = 5e-072
Identities = 110/145 (75%), Positives = 128/145 (88%)
Frame = -2 / +1
Query: 625 AMDPDAVAKAFVEHYYRTFDTNRAALVGLYQETSMLTFEGQKFQGPSAIAGKLGSLPFQA 446
AMDPD+V+KAFV+HYY+TFD+NRAALVGLYQ+ SMLTFEG+KF GP+AIAGKLGSLPFQ
Sbjct: 73 AMDPDSVSKAFVQHYYQTFDSNRAALVGLYQDGSMLTFEGEKFGGPAAIAGKLGSLPFQQ 252
Query: 445 CEHQIVTVDCQPSGPQGGMLVFVSGSIRTGPEEHPIKFSQAFHLLPAAGSFFVQNDMFRL 266
C+H+I TVDCQPSGPQGG+LVFVSG+I TGP EHP+KFSQ FHLLPA GSF+VQNDMFRL
Sbjct: 253 CQHKIDTVDCQPSGPQGGVLVFVSGTITTGPGEHPLKFSQMFHLLPAGGSFYVQNDMFRL 432
Query: 265 NYG*RQPILL**RNCLRVSC*NDEY 191
NYG* + L +N +R C*N+EY
Sbjct: 433 NYG**RAATLAAKNLIRDLC*NNEY 507
Score = 240 bits (518), Expect = 8e-063
Identities = 106/150 (70%), Positives = 113/150 (75%)
Frame = +3 / -1
Query: 186 IKYSSFQHETLKQFLHHKSIGCL*P*FRRNMSFCTKKDPAAGSKWNAWENLMGCSSGPVR 365
I+YS FQH++L +F + *P*FRRNMSFCT K P AGSKWN ENL GCS GPV
Sbjct: 512 IRYSLFQHKSLIKFFAARVAALH*P*FRRNMSFCT*KLPPAGSKWNICENLRGCSPGPVV 333
Query: 366 MEPETKTSMPPWGPDGWQSTVTI*CSQAWKGRDPSLPAMADGPWNFWPSKVSMEVSWYSP 545
M PETKT PPWGP+GWQSTV+I C WKGRDPSLPAMA GP NF PSKVSME SWYSP
Sbjct: 332 MVPETKTRTPPWGPEGWQSTVSILCWHCWKGRDPSLPAMAAGPPNFSPSKVSMEPSWYSP 153
Query: 546 TSAARLVSNVR**CSTKAFATASGSIAITS 635
TSAARL SNV **C T AF T SGSIA S
Sbjct: 152 TSAARLESNVW**C*TNAFDTESGSIASPS 63
Score = 203 bits (438), Expect = 9e-052
Identities = 93/139 (66%), Positives = 102/139 (73%)
Frame = -1 / +3
Query: 602 EGLRGALLPNVRHQPRGAGWAVPGDLHAHLRGPEVPGPVRHCRQARISPFPGLRASDRHR 423
EG+R ALLP+VR QPR AG AVPG LHAHLRG EV P RH QARISP P + A DR+R
Sbjct: 96 EGVRSALLPDVRLQPRRAGGAVPGRLHAHLRGREVRRPRRHRWQARISPLPAVPAQDRYR 275
Query: 422 RLPAIGSPGRHARLRLRFHTHRPRGAPHQVLPGIPFAAGRWVLLRAE*HVPPELWLKTAD 243
RLPA+G+PGR RLRLR H HRPR AP QVL +PFAA LLRAE*HVPPELWL
Sbjct: 276 RLPALGAPGRRPRLRLRHHHHRPRRAPPQVLTDVPFAASWRELLRAE*HVPPELWLMKGG 455
Query: 242 TLVMKELFKGFMLKR*ILN 186
KEL +GFMLK+*I N
Sbjct: 456 HSGSKELDQGFMLKQ*ISN 512
Score = 122 bits (262), Expect(2) = 3e-033
Identities = 62/94 (65%), Positives = 67/94 (71%)
Frame = +2 / -3
Query: 185 H*VFIVST*NP*TIPSSQEYRLSLAIVQAEHVILHEEGPSGRQQMECLGELDGVLLGAGA 364
H +FIVST* P + Q R SL IVQAEHVILH E PS QQME L EL+GVL GAG
Sbjct: 513 HSIFIVST*IPDQVLCCQSGRPSLTIVQAEHVILHVEAPSSWQQMEHL*ELEGVLAGAGG 334
Query: 365 YGTGDEDEHASLGTRWLAVDGDDLMLAGLERERS 466
G GDEDE A+LG R LAVDG DL+LA LE ERS
Sbjct: 333 DGAGDEDEDAALGPRGLAVDGIDLVLALLEGERS 232
Score = 90.4 bits (191), Expect(2) = 1e-030
Identities = 37/64 (57%), Positives = 41/64 (64%)
Frame = +1 / -2
Query: 397 PGDPMAGXXXXXXXXXXPGKGEIRACRQWRTGPGTSGPRR*AWRSPGTAQPAPRGWCRTF 576
PG P AG G+GEIRAC++WR G TS PRR*AW PGTA PA RGW RT
Sbjct: 301 PGAPRAGSRRYRSCAGTAGRGEIRACQRWRRGRRTSRPRR*AWSRPGTAPPARRGWSRTS 122
Query: 577 GSNA 588
GS+A
Sbjct: 121 GSSA 110
Score = 62.9 bits (131), Expect(2) = 1e-030
Identities = 28/57 (49%), Positives = 37/57 (64%)
Frame = +1 / -2
Query: 178 AATLSIHRFNMKPLNNSFITRVSAVFSHSSGGTCHSARRRTQRPAANGMPGRT*WGA 348
A++ IH FN+ P ++S + +HSSGGTCHSARR + + AANG RT* GA
Sbjct: 520 ASSFDIHCFNINP*SSSLLPEWPPFINHSSGGTCHSARRSSLQLAANGTSVRT*GGA 350
Score = 39.1 bits (79), Expect(2) = 3e-033
Identities = 17/24 (70%), Positives = 21/24 (87%)
Frame = +2 / -3
Query: 536 VQPNQRRAVGVERSVVMLHEGLRY 607
VQP+QR AVGVER VV+L+E LR+
Sbjct: 162 VQPHQRGAVGVERLVVVLNERLRH 91
>gb|BF260888.3|BF260888 HVSMEf0023D08f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEf0023D08f, mRNA sequence
Length = 701
Score = 269 bits (581), Expect = 2e-071
Identities = 109/145 (75%), Positives = 127/145 (87%)
Frame = -2 / +1
Query: 625 AMDPDAVAKAFVEHYYRTFDTNRAALVGLYQETSMLTFEGQKFQGPSAIAGKLGSLPFQA 446
AMDPD+V+KAFV+HYY+TFD+NRAALVGLYQ+ SMLTFEG+KF GP+AIAGKLGSLPFQ
Sbjct: 37 AMDPDSVSKAFVQHYYQTFDSNRAALVGLYQDGSMLTFEGEKFGGPAAIAGKLGSLPFQQ 216
Query: 445 CEHQIVTVDCQPSGPQGGMLVFVSGSIRTGPEEHPIKFSQAFHLLPAAGSFFVQNDMFRL 266
C+H+I TVDCQPSGPQGG+LVFV G+I TGP EHP+KFSQ FHLLPA GSF+VQNDMFRL
Sbjct: 217 CQHKIDTVDCQPSGPQGGVLVFVFGTITTGPGEHPLKFSQMFHLLPAGGSFYVQNDMFRL 396
Query: 265 NYG*RQPILL**RNCLRVSC*NDEY 191
NYG* + L +N +R C*N+EY
Sbjct: 397 NYG*GKAATLAAKNLIRDLC*NNEY 471
Score = 237 bits (513), Expect = 4e-062
Identities = 105/150 (70%), Positives = 113/150 (75%)
Frame = +3 / -1
Query: 186 IKYSSFQHETLKQFLHHKSIGCL*P*FRRNMSFCTKKDPAAGSKWNAWENLMGCSSGPVR 365
I+YS FQH++L +F + *P*FRRNMSFCT K P AGSKWN ENL GCS GPV
Sbjct: 476 IRYSLFQHKSLIKFFAARVAAFP*P*FRRNMSFCT*KLPPAGSKWNICENLRGCSPGPVV 297
Query: 366 MEPETKTSMPPWGPDGWQSTVTI*CSQAWKGRDPSLPAMADGPWNFWPSKVSMEVSWYSP 545
M P+TKT PPWGP+GWQSTV+I C WKGRDPSLPAMA GP NF PSKVSME SWYSP
Sbjct: 296 MVPKTKTRTPPWGPEGWQSTVSILCWHCWKGRDPSLPAMAAGPPNFSPSKVSMEPSWYSP 117
Query: 546 TSAARLVSNVR**CSTKAFATASGSIAITS 635
TSAARL SNV **C T AF T SGSIA S
Sbjct: 116 TSAARLESNVW**C*TNAFDTESGSIASPS 27
Score = 201 bits (433), Expect = 4e-051
Identities = 92/139 (66%), Positives = 102/139 (73%)
Frame = -1 / +3
Query: 602 EGLRGALLPNVRHQPRGAGWAVPGDLHAHLRGPEVPGPVRHCRQARISPFPGLRASDRHR 423
EG+R ALLP+VR QPR AG AVPG LHAHLRG EV P RH QARISP P + A DR+R
Sbjct: 60 EGVRSALLPDVRLQPRRAGGAVPGRLHAHLRGREVRRPRRHRWQARISPLPAVPAQDRYR 239
Query: 422 RLPAIGSPGRHARLRLRFHTHRPRGAPHQVLPGIPFAAGRWVLLRAE*HVPPELWLKTAD 243
RLPA+G+P R RLRLR H HRPR AP QVL +PFAA LLRAE*HVPPELWL+
Sbjct: 240 RLPALGAPRRRPRLRLRHHHHRPRRAPPQVLTDVPFAASWRELLRAE*HVPPELWLRKGG 419
Query: 242 TLVMKELFKGFMLKR*ILN 186
KEL +GFMLK+*I N
Sbjct: 420 HSGSKELDQGFMLKQ*ISN 476
Score = 122 bits (261), Expect(2) = 4e-033
Identities = 62/94 (65%), Positives = 67/94 (71%)
Frame = +2 / -3
Query: 185 H*VFIVST*NP*TIPSSQEYRLSLAIVQAEHVILHEEGPSGRQQMECLGELDGVLLGAGA 364
H +FIVST* P + Q RLSL IVQAEHVILH E PS QQME L EL+GVL GAG
Sbjct: 477 HSIFIVST*IPDQVLCCQSGRLSLTIVQAEHVILHVEAPSSWQQMEHL*ELEGVLAGAGG 298
Query: 365 YGTGDEDEHASLGTRWLAVDGDDLMLAGLERERS 466
G DEDE A+LG R LAVDG DL+LA LE ERS
Sbjct: 297 DGAEDEDEDAALGPRGLAVDGIDLVLALLEGERS 196
Score = 87.2 bits (184), Expect(2) = 9e-030
Identities = 36/63 (57%), Positives = 40/63 (63%)
Frame = +1 / -2
Query: 400 GDPMAGXXXXXXXXXXPGKGEIRACRQWRTGPGTSGPRR*AWRSPGTAQPAPRGWCRTFG 579
G P AG G+GEIRAC++WR G TS PRR*AW PGTA PA RGW RT G
Sbjct: 262 GAPRAGSRRYRSCAGTAGRGEIRACQRWRRGRRTSRPRR*AWSRPGTAPPARRGWSRTSG 83
Query: 580 SNA 588
S+A
Sbjct: 82 SSA 74
Score = 62.9 bits (131), Expect(2) = 9e-030
Identities = 28/57 (49%), Positives = 37/57 (64%)
Frame = +1 / -2
Query: 178 AATLSIHRFNMKPLNNSFITRVSAVFSHSSGGTCHSARRRTQRPAANGMPGRT*WGA 348
A++ IH FN+ P ++S + +HSSGGTCHSARR + + AANG RT* GA
Sbjct: 484 ASSFDIHCFNINP*SSSLLPEWPPFLNHSSGGTCHSARRSSLQLAANGTSVRT*GGA 314
Score = 39.1 bits (79), Expect(2) = 4e-033
Identities = 17/24 (70%), Positives = 21/24 (87%)
Frame = +2 / -3
Query: 536 VQPNQRRAVGVERSVVMLHEGLRY 607
VQP+QR AVGVER VV+L+E LR+
Sbjct: 126 VQPHQRGAVGVERLVVVLNERLRH 55
>gb|BM097606.2|BM097606 EBem04_SQ002_C24_R embryo, 12 DPA, no treatment, cv Optic, EBem04
Hordeum vulgare subsp. vulgare cDNA clone
EBem04_SQ002_C24 5', mRNA sequence
Length = 560
Score = 269 bits (581), Expect = 2e-071
Identities = 109/145 (75%), Positives = 127/145 (87%)
Frame = -2 / +3
Query: 625 AMDPDAVAKAFVEHYYRTFDTNRAALVGLYQETSMLTFEGQKFQGPSAIAGKLGSLPFQA 446
AMDPD+V+KAFV+HYY+TFD+NRAALVGLYQ+ SMLTFEG+KF GP+AIAGKLGSLPFQ
Sbjct: 93 AMDPDSVSKAFVQHYYQTFDSNRAALVGLYQDGSMLTFEGEKFGGPAAIAGKLGSLPFQQ 272
Query: 445 CEHQIVTVDCQPSGPQGGMLVFVSGSIRTGPEEHPIKFSQAFHLLPAAGSFFVQNDMFRL 266
C+H+I TVDCQPSGPQGG+LVFVSG+I TGP EHP+KFSQ FHLLPA GSF+VQNDMFRL
Sbjct: 273 CQHKIDTVDCQPSGPQGGVLVFVSGTITTGPGEHPLKFSQMFHLLPAGGSFYVQNDMFRL 452
Query: 265 NYG*RQPILL**RNCLRVSC*NDEY 191
NYG* + L +N + C*N+EY
Sbjct: 453 NYG*GRAATLAAKNLITDLC*NNEY 527
Score = 238 bits (515), Expect = 2e-062
Identities = 105/150 (70%), Positives = 113/150 (75%)
Frame = +3 / -2
Query: 186 IKYSSFQHETLKQFLHHKSIGCL*P*FRRNMSFCTKKDPAAGSKWNAWENLMGCSSGPVR 365
I+YS FQH+++ +F + *P*FRRNMSFCT K P AGSKWN ENL GCS GPV
Sbjct: 532 IRYSLFQHKSVIKFFAARVAALP*P*FRRNMSFCT*KLPPAGSKWNICENLRGCSPGPVV 353
Query: 366 MEPETKTSMPPWGPDGWQSTVTI*CSQAWKGRDPSLPAMADGPWNFWPSKVSMEVSWYSP 545
M PETKT PPWGP+GWQSTV+I C WKGRDPSLPAMA GP NF PSKVSME SWYSP
Sbjct: 352 MVPETKTRTPPWGPEGWQSTVSILCWHCWKGRDPSLPAMAAGPPNFSPSKVSMEPSWYSP 173
Query: 546 TSAARLVSNVR**CSTKAFATASGSIAITS 635
TSAARL SNV **C T AF T SGSIA S
Sbjct: 172 TSAARLESNVW**C*TNAFDTESGSIASPS 83
Score = 204 bits (439), Expect = 6e-052
Identities = 93/139 (66%), Positives = 102/139 (73%)
Frame = -1 / +2
Query: 602 EGLRGALLPNVRHQPRGAGWAVPGDLHAHLRGPEVPGPVRHCRQARISPFPGLRASDRHR 423
EG+R ALLP+VR QPR AG AVPG LHAHLRG EV P RH QARISP P + A DR+R
Sbjct: 116 EGVRSALLPDVRLQPRRAGGAVPGRLHAHLRGREVRRPRRHRWQARISPLPAVPAQDRYR 295
Query: 422 RLPAIGSPGRHARLRLRFHTHRPRGAPHQVLPGIPFAAGRWVLLRAE*HVPPELWLKTAD 243
RLPA+G+PGR RLRLR H HRPR AP QVL +PFAA LLRAE*HVPPELWL+
Sbjct: 296 RLPALGAPGRRPRLRLRHHHHRPRRAPPQVLTDVPFAASWRELLRAE*HVPPELWLRKGG 475
Query: 242 TLVMKELFKGFMLKR*ILN 186
KEL GFMLK+*I N
Sbjct: 476 HSGSKELDHGFMLKQ*ISN 532
Score = 118 bits (253), Expect(2) = 4e-032
Identities = 61/94 (64%), Positives = 66/94 (70%)
Frame = +2 / -1
Query: 185 H*VFIVST*NP*TIPSSQEYRLSLAIVQAEHVILHEEGPSGRQQMECLGELDGVLLGAGA 364
H +FIVST* + Q R SL IVQAEHVILH E PS QQME L EL+GVL GAG
Sbjct: 533 HSIFIVST*IRDQVLCCQSGRPSLTIVQAEHVILHVEAPSSWQQMEHL*ELEGVLAGAGG 354
Query: 365 YGTGDEDEHASLGTRWLAVDGDDLMLAGLERERS 466
G GDEDE A+LG R LAVDG DL+LA LE ERS
Sbjct: 353 DGAGDEDEDAALGPRGLAVDGIDLVLALLEGERS 252
Score = 90.4 bits (191), Expect(2) = 1e-030
Identities = 37/64 (57%), Positives = 41/64 (64%)
Frame = +1 / -3
Query: 397 PGDPMAGXXXXXXXXXXPGKGEIRACRQWRTGPGTSGPRR*AWRSPGTAQPAPRGWCRTF 576
PG P AG G+GEIRAC++WR G TS PRR*AW PGTA PA RGW RT
Sbjct: 321 PGAPRAGSRRYRSCAGTAGRGEIRACQRWRRGRRTSRPRR*AWSRPGTAPPARRGWSRTS 142
Query: 577 GSNA 588
GS+A
Sbjct: 141 GSSA 130
Score = 62.9 bits (131), Expect(2) = 1e-030
Identities = 28/57 (49%), Positives = 37/57 (64%)
Frame = +1 / -3
Query: 178 AATLSIHRFNMKPLNNSFITRVSAVFSHSSGGTCHSARRRTQRPAANGMPGRT*WGA 348
A++ IH FN+ P ++S + +HSSGGTCHSARR + + AANG RT* GA
Sbjct: 540 ASSFDIHCFNINP*SSSLLPEWPPFLNHSSGGTCHSARRSSLQLAANGTSVRT*GGA 370
Score = 39.1 bits (79), Expect(2) = 4e-032
Identities = 17/24 (70%), Positives = 21/24 (87%)
Frame = +2 / -1
Query: 536 VQPNQRRAVGVERSVVMLHEGLRY 607
VQP+QR AVGVER VV+L+E LR+
Sbjct: 182 VQPHQRGAVGVERLVVVLNERLRH 111
>gb|AV931655.1|AV931655 AV931655 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp.
vulgare cDNA clone basd23k17 3', mRNA sequence
Length = 529
Score = 264 bits (571), Expect = 4e-070
Identities = 108/145 (74%), Positives = 126/145 (86%)
Frame = -2 / -2
Query: 625 AMDPDAVAKAFVEHYYRTFDTNRAALVGLYQETSMLTFEGQKFQGPSAIAGKLGSLPFQA 446
AMDPD+V+KAFV+HYY+TFD+NRAALVGLYQ+ SMLTFEG+KF GP+AIAGKLGSLPFQ
Sbjct: 480 AMDPDSVSKAFVQHYYQTFDSNRAALVGLYQDGSMLTFEGEKFGGPAAIAGKLGSLPFQQ 301
Query: 445 CEHQIVTVDCQPSGPQGGMLVFVSGSIRTGPEEHPIKFSQAFHLLPAAGSFFVQNDMFRL 266
C+H+I TVDCQPSGPQGG+LVFVSG+I TGP EHP+KFSQ FHLLPA GSF+VQNDMFRL
Sbjct: 300 CQHKIDTVDCQPSGPQGGVLVFVSGTITTGPGEHPLKFSQMFHLLPAGGSFYVQNDMFRL 121
Query: 265 NYG*RQPILL**RNCLRVSC*NDEY 191
NYG* + L +N +R N+EY
Sbjct: 120 NYG*GRAATLAAKNLIRDLXXNNEY 46
Score = 231 bits (498), Expect = 5e-060
Identities = 103/149 (69%), Positives = 110/149 (73%)
Frame = +3 / +2
Query: 189 KYSSFQHETLKQFLHHKSIGCL*P*FRRNMSFCTKKDPAAGSKWNAWENLMGCSSGPVRM 368
+YS Q ++L +F + *P*FRRNMSFCT K P AGSKWN ENL GCS GPV M
Sbjct: 44 RYSLXQXKSLIKFFAARVAALP*P*FRRNMSFCT*KLPPAGSKWNICENLRGCSPGPVVM 223
Query: 369 EPETKTSMPPWGPDGWQSTVTI*CSQAWKGRDPSLPAMADGPWNFWPSKVSMEVSWYSPT 548
PETKT PPWGP+GWQSTV+I C WKGRDPSLPAMA GP NF PSKVSME SWYSPT
Sbjct: 224 VPETKTRTPPWGPEGWQSTVSILCWHCWKGRDPSLPAMAAGPPNFSPSKVSMEPSWYSPT 403
Query: 549 SAARLVSNVR**CSTKAFATASGSIAITS 635
SAARL SNV **C T AF T SGSIA S
Sbjct: 404 SAARLESNVW**C*TNAFDTESGSIASPS 490
Score = 197 bits (425), Expect = 5e-050
Identities = 90/137 (65%), Positives = 100/137 (72%)
Frame = -1 / -1
Query: 602 EGLRGALLPNVRHQPRGAGWAVPGDLHAHLRGPEVPGPVRHCRQARISPFPGLRASDRHR 423
EG+R ALLP+VR QPR AG AVPG LHAHLRG EV P RH QARISP P + A DR+R
Sbjct: 457 EGVRSALLPDVRLQPRRAGGAVPGRLHAHLRGREVRRPRRHRWQARISPLPAVPAQDRYR 278
Query: 422 RLPAIGSPGRHARLRLRFHTHRPRGAPHQVLPGIPFAAGRWVLLRAE*HVPPELWLKTAD 243
RLPA+G+PGR RLRLR H HRPR AP QVL +PFAA LLRAE*HVPPELWL+
Sbjct: 277 RLPALGAPGRRPRLRLRHHHHRPRRAPPQVLTDVPFAASWRELLRAE*HVPPELWLRKGG 98
Query: 242 TLVMKELFKGFMLKR*I 192
KEL +GF L +*I
Sbjct: 97 HSGSKELDQGFXLXQ*I 47
Score = 119 bits (254), Expect(2) = 3e-032
Identities = 60/92 (65%), Positives = 65/92 (70%)
Frame = +2 / +1
Query: 191 VFIVST*NP*TIPSSQEYRLSLAIVQAEHVILHEEGPSGRQQMECLGELDGVLLGAGAYG 370
+FIV T* P + Q R SL IVQAEHVILH E PS QQME L EL+GVL GAG G
Sbjct: 46 IFIVXT*IPDQVLCCQSGRPSLTIVQAEHVILHVEAPSSWQQMEHL*ELEGVLAGAGGDG 225
Query: 371 TGDEDEHASLGTRWLAVDGDDLMLAGLERERS 466
GDEDE A+LG R LAVDG DL+LA LE ERS
Sbjct: 226 AGDEDEDAALGPRGLAVDGIDLVLALLEGERS 321
Score = 90.4 bits (191), Expect(2) = 3e-029
Identities = 37/64 (57%), Positives = 41/64 (64%)
Frame = +1 / +3
Query: 397 PGDPMAGXXXXXXXXXXPGKGEIRACRQWRTGPGTSGPRR*AWRSPGTAQPAPRGWCRTF 576
PG P AG G+GEIRAC++WR G TS PRR*AW PGTA PA RGW RT
Sbjct: 252 PGAPRAGSRRYRSCAGTAGRGEIRACQRWRRGRRTSRPRR*AWSRPGTAPPARRGWSRTS 431
Query: 577 GSNA 588
GS+A
Sbjct: 432 GSSA 443
Score = 57.9 bits (120), Expect(2) = 3e-029
Identities = 28/67 (41%), Positives = 37/67 (55%)
Frame = +1 / +3
Query: 148 NKEDTKETRVAATLSIHRFNMKPLNNSFITRVSAVFSHSSGGTCHSARRRTQRPAANGMP 327
+K K++ IH N P ++S + +HSSGGTCHSARR + + AANG
Sbjct: 3 HKLXNKQSLQHXAFDIHCXNXNP*SSSLLPEWPPFLNHSSGGTCHSARRSSLQLAANGTS 182
Query: 328 GRT*WGA 348
RT* GA
Sbjct: 183 VRT*GGA 203
Score = 39.1 bits (79), Expect(2) = 3e-032
Identities = 17/24 (70%), Positives = 21/24 (87%)
Frame = +2 / +1
Query: 536 VQPNQRRAVGVERSVVMLHEGLRY 607
VQP+QR AVGVER VV+L+E LR+
Sbjct: 391 VQPHQRGAVGVERLVVVLNERLRH 462
>gb|BI779400.2|BI779400 EBro01_SQ003_O11_R root, 3 week, hydroponic grown, no treatment, cv
Optic, EBro01 Hordeum vulgare subsp. vulgare cDNA clone
EBro01_SQ003_O11 5', mRNA sequence
Length = 654
Score = 262 bits (566), Expect = 2e-069
Identities = 108/145 (74%), Positives = 126/145 (86%)
Frame = -2 / +1
Query: 625 AMDPDAVAKAFVEHYYRTFDTNRAALVGLYQETSMLTFEGQKFQGPSAIAGKLGSLPFQA 446
AMDPD+V+KAFV+HYY+TFD+NRAAL GLYQ+ SMLTFEG+KF GP+AIAGKLGSLPFQ
Sbjct: 76 AMDPDSVSKAFVQHYYQTFDSNRAALGGLYQDGSMLTFEGEKFGGPAAIAGKLGSLPFQQ 255
Query: 445 CEHQIVTVDCQPSGPQGGMLVFVSGSIRTGPEEHPIKFSQAFHLLPAAGSFFVQNDMFRL 266
C+H+I TVD QPSGPQGG+LVFVSG+I TGP EHP+KFSQ FHLLPA GSF+VQNDMFRL
Sbjct: 256 CQHKIDTVDWQPSGPQGGVLVFVSGTITTGPGEHPLKFSQMFHLLPAGGSFYVQNDMFRL 435
Query: 265 NYG*RQPILL**RNCLRVSC*NDEY 191
NYG* + L +N +R C*N+EY
Sbjct: 436 NYG*GRAGTLAAKNLIRDLC*NNEY 510
Score = 226 bits (488), Expect = 1e-058
Identities = 101/147 (68%), Positives = 109/147 (74%)
Frame = +3 / -2
Query: 186 IKYSSFQHETLKQFLHHKSIGCL*P*FRRNMSFCTKKDPAAGSKWNAWENLMGCSSGPVR 365
I+YS FQH++L +F + P*FRRNMSFCT K P AGSKWN ENL GCS GPV
Sbjct: 515 IRYSLFQHKSLIKFFAARVPALPYP*FRRNMSFCT*KLPPAGSKWNICENLRGCSPGPVV 336
Query: 366 MEPETKTSMPPWGPDGWQSTVTI*CSQAWKGRDPSLPAMADGPWNFWPSKVSMEVSWYSP 545
M PETKT PPWGP+G QSTV+I C WKGRDPSLPAMA GP NF PSKVSM+ SWYSP
Sbjct: 335 MVPETKTRTPPWGPEGCQSTVSILCWHCWKGRDPSLPAMAAGPPNFSPSKVSMDPSWYSP 156
Query: 546 TSAARLVSNVR**CSTKAFATASGSIA 626
SAARL SNV **C T AF T SGSIA
Sbjct: 155 PSAARLESNVW**C*TNAFDTESGSIA 75
Score = 194 bits (419), Expect = 4e-049
Identities = 89/139 (64%), Positives = 101/139 (72%)
Frame = -1 / +3
Query: 602 EGLRGALLPNVRHQPRGAGWAVPGDLHAHLRGPEVPGPVRHCRQARISPFPGLRASDRHR 423
EG+R ALLP+VR QPR AG AVPG +HAHLRG EV RH QARISP P + A DR+R
Sbjct: 99 EGVRSALLPDVRLQPRRAGGAVPGRVHAHLRGREVRRARRHRWQARISPLPAVPAQDRYR 278
Query: 422 RLPAIGSPGRHARLRLRFHTHRPRGAPHQVLPGIPFAAGRWVLLRAE*HVPPELWLKTAD 243
RL A+G+PGR RLRLR H HRPR AP QVL +PFAA LLRAE*HVPPELW++
Sbjct: 279 RLAALGAPGRRPRLRLRHHHHRPRRAPPQVLTDVPFAASWRELLRAE*HVPPELWVRKGG 458
Query: 242 TLVMKELFKGFMLKR*ILN 186
KEL +GFMLK+*I N
Sbjct: 459 HSGSKELDQGFMLKQ*ISN 515
Score = 120 bits (257), Expect(2) = 3e-032
Identities = 61/94 (64%), Positives = 66/94 (70%)
Frame = +2 / -1
Query: 185 H*VFIVST*NP*TIPSSQEYRLSLAIVQAEHVILHEEGPSGRQQMECLGELDGVLLGAGA 364
H +FIVST* P + Q R SL IVQAEHVILH E PS QQME L EL+GVL GAG
Sbjct: 516 HSIFIVST*IPDQVLCCQSARPSLPIVQAEHVILHVEAPSSWQQMEHL*ELEGVLAGAGG 337
Query: 365 YGTGDEDEHASLGTRWLAVDGDDLMLAGLERERS 466
G GDEDE A+LG R L VDG DL+LA LE ERS
Sbjct: 336 DGAGDEDEDAALGPRGLPVDGIDLVLALLEGERS 235
Score = 84.9 bits (179), Expect(2) = 2e-029
Identities = 35/64 (54%), Positives = 39/64 (60%)
Frame = +1 / -3
Query: 397 PGDPMAGXXXXXXXXXXPGKGEIRACRQWRTGPGTSGPRR*AWRSPGTAQPAPRGWCRTF 576
PG P A G+GEIRAC++WR TS PRR*AW PGTA PA RGW RT
Sbjct: 304 PGAPRAASRRYRSCAGTAGRGEIRACQRWRRARRTSRPRR*AWTRPGTAPPARRGWSRTS 125
Query: 577 GSNA 588
GS+A
Sbjct: 124 GSSA 113
Score = 63.8 bits (133), Expect(2) = 2e-029
Identities = 28/57 (49%), Positives = 37/57 (64%)
Frame = +1 / -3
Query: 178 AATLSIHRFNMKPLNNSFITRVSAVFSHSSGGTCHSARRRTQRPAANGMPGRT*WGA 348
A++ IH FN+ P ++S + +HSSGGTCHSARR + + AANG RT* GA
Sbjct: 523 ASSFDIHCFNINP*SSSLLPECPPFLTHSSGGTCHSARRSSLQLAANGTSVRT*GGA 353
Score = 37.7 bits (76), Expect(2) = 3e-032
Identities = 17/24 (70%), Positives = 20/24 (83%)
Frame = +2 / -1
Query: 536 VQPNQRRAVGVERSVVMLHEGLRY 607
VQP QR AVGVER VV+L+E LR+
Sbjct: 165 VQPPQRGAVGVERLVVVLNERLRH 94
>gb|BM440853.2|BM440853 EBca01_SQ001_G18_R carpel, pre-anthesis, no treatment, cv Optic,
EBca01 Hordeum vulgare subsp. vulgare cDNA clone
EBca01_SQ001_G18 5', mRNA sequence
Length = 478
Score = 260 bits (563), Expect = 5e-069
Identities = 105/137 (76%), Positives = 122/137 (89%)
Frame = -2 / +1
Query: 625 AMDPDAVAKAFVEHYYRTFDTNRAALVGLYQETSMLTFEGQKFQGPSAIAGKLGSLPFQA 446
AMDPD+V+KAFV+HYY+TFD+NRAALVGLYQ+ SMLTFEG+KF GP+AIAGKLGSLPFQ
Sbjct: 61 AMDPDSVSKAFVQHYYQTFDSNRAALVGLYQDGSMLTFEGEKFGGPAAIAGKLGSLPFQQ 240
Query: 445 CEHQIVTVDCQPSGPQGGMLVFVSGSIRTGPEEHPIKFSQAFHLLPAAGSFFVQNDMFRL 266
C+H+I TVDCQPSGPQGG+LVFVSG+I TGP EHP+KFSQ FHLLPA GSF+VQNDMFRL
Sbjct: 241 CQHKIDTVDCQPSGPQGGVLVFVSGTITTGPGEHPLKFSQMFHLLPAGGSFYVQNDMFRL 420
Query: 265 NYG*RQPILL**RNCLR 215
NYG* + L +N +R
Sbjct: 421 NYG*GRAATLAAKNLIR 471
Score = 224 bits (484), Expect = 4e-058
Identities = 100/142 (70%), Positives = 106/142 (74%)
Frame = +3 / -3
Query: 210 ETLKQFLHHKSIGCL*P*FRRNMSFCTKKDPAAGSKWNAWENLMGCSSGPVRMEPETKTS 389
++L +F + *P*FRRNMSFCT K P AGSKWN ENL GCS GPV M PETKT
Sbjct: 476 KSLIKFFAARVAALP*P*FRRNMSFCT*KLPPAGSKWNICENLRGCSPGPVVMVPETKTR 297
Query: 390 MPPWGPDGWQSTVTI*CSQAWKGRDPSLPAMADGPWNFWPSKVSMEVSWYSPTSAARLVS 569
PPWGP+GWQSTV+I C WKGRDPSLPAMA GP NF PSKVSME SWYSPTSAARL S
Sbjct: 296 TPPWGPEGWQSTVSILCWHCWKGRDPSLPAMAAGPPNFSPSKVSMEPSWYSPTSAARLES 117
Query: 570 NVR**CSTKAFATASGSIAITS 635
NV **C T AF T SGSIA S
Sbjct: 116 NVW**C*TNAFDTESGSIASPS 51
Score = 193 bits (417), Expect = 7e-049
Identities = 87/131 (66%), Positives = 96/131 (73%)
Frame = -1 / +3
Query: 602 EGLRGALLPNVRHQPRGAGWAVPGDLHAHLRGPEVPGPVRHCRQARISPFPGLRASDRHR 423
EG+R ALLP+VR QPR AG AVPG LHAHLRG EV P RH QARISP P + A DR+R
Sbjct: 84 EGVRSALLPDVRLQPRRAGGAVPGRLHAHLRGREVRRPRRHRWQARISPLPAVPAQDRYR 263
Query: 422 RLPAIGSPGRHARLRLRFHTHRPRGAPHQVLPGIPFAAGRWVLLRAE*HVPPELWLKTAD 243
RLPA+G+PGR RLRLR H HRPR AP QVL +PFAA LLRAE*HVPPELWL+
Sbjct: 264 RLPALGAPGRRPRLRLRHHHHRPRRAPPQVLTDVPFAASWRELLRAE*HVPPELWLRKGG 443
Query: 242 TLVMKELFKGF 210
KEL +GF
Sbjct: 444 HSGSKELDQGF 476
Score = 110 bits (234), Expect(2) = 2e-029
Identities = 54/77 (70%), Positives = 57/77 (74%)
Frame = +2 / -2
Query: 236 QEYRLSLAIVQAEHVILHEEGPSGRQQMECLGELDGVLLGAGAYGTGDEDEHASLGTRWL 415
Q R SL IVQAEHVILH E PS QQME L EL+GVL GAG G GDEDE A+LG R L
Sbjct: 450 QSGRPSLTIVQAEHVILHVEAPSSWQQMEHL*ELEGVLAGAGGDGAGDEDEDAALGPRGL 271
Query: 416 AVDGDDLMLAGLERERS 466
AVDG DL+LA LE ERS
Sbjct: 270 AVDGIDLVLALLEGERS 220
Score = 90.4 bits (191), Expect(2) = 5e-027
Identities = 37/64 (57%), Positives = 41/64 (64%)
Frame = +1 / -1
Query: 397 PGDPMAGXXXXXXXXXXPGKGEIRACRQWRTGPGTSGPRR*AWRSPGTAQPAPRGWCRTF 576
PG P AG G+GEIRAC++WR G TS PRR*AW PGTA PA RGW RT
Sbjct: 289 PGAPRAGSRRYRSCAGTAGRGEIRACQRWRRGRRTSRPRR*AWSRPGTAPPARRGWSRTS 110
Query: 577 GSNA 588
GS+A
Sbjct: 109 GSSA 98
Score = 50.6 bits (104), Expect(2) = 5e-027
Identities = 23/47 (48%), Positives = 30/47 (63%)
Frame = +1 / -1
Query: 208 MKPLNNSFITRVSAVFSHSSGGTCHSARRRTQRPAANGMPGRT*WGA 348
+ P ++S + +HSSGGTCHSARR + + AANG RT* GA
Sbjct: 478 INP*SSSLLPEWPPFLNHSSGGTCHSARRSSLQLAANGTSVRT*GGA 338
Score = 39.1 bits (79), Expect(2) = 2e-029
Identities = 17/24 (70%), Positives = 21/24 (87%)
Frame = +2 / -2
Query: 536 VQPNQRRAVGVERSVVMLHEGLRY 607
VQP+QR AVGVER VV+L+E LR+
Sbjct: 150 VQPHQRGAVGVERLVVVLNERLRH 79
>gb|CA023173.1|CA023173 HZ45H05r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ45H05
5-PRIME, mRNA sequence
Length = 455
Score = 258 bits (557), Expect = 3e-068
Identities = 102/124 (82%), Positives = 116/124 (93%)
Frame = -2 / +2
Query: 625 AMDPDAVAKAFVEHYYRTFDTNRAALVGLYQETSMLTFEGQKFQGPSAIAGKLGSLPFQA 446
AMDPD+V+KAFV+HYY+TFD+NRAALVGLYQ+ SMLTFEG+KF GP+AIAGKLGSLPFQ
Sbjct: 77 AMDPDSVSKAFVQHYYQTFDSNRAALVGLYQDGSMLTFEGEKFGGPAAIAGKLGSLPFQQ 256
Query: 445 CEHQIVTVDCQPSGPQGGMLVFVSGSIRTGPEEHPIKFSQAFHLLPAAGSFFVQNDMFRL 266
C+H+I TVDCQPSGPQGG+LVFVSG+I TGP EHP+KFSQ FHLLPA GSF+VQNDMFRL
Sbjct: 257 CQHKIDTVDCQPSGPQGGVLVFVSGTITTGPGEHPLKFSQMFHLLPAGGSFYVQNDMFRL 436
Query: 265 NYG* 254
NYG*
Sbjct: 437 NYG* 448
Score = 224 bits (483), Expect = 5e-058
Identities = 98/127 (77%), Positives = 100/127 (78%)
Frame = +3 / -3
Query: 255 *P*FRRNMSFCTKKDPAAGSKWNAWENLMGCSSGPVRMEPETKTSMPPWGPDGWQSTVTI 434
*P*FRRNMSFCT K P AGSKWN ENL GCS GPV M PETKT PPWGP+GWQSTV+I
Sbjct: 447 *P*FRRNMSFCT*KLPPAGSKWNICENLRGCSPGPVVMVPETKTRTPPWGPEGWQSTVSI 268
Query: 435 *CSQAWKGRDPSLPAMADGPWNFWPSKVSMEVSWYSPTSAARLVSNVR**CSTKAFATAS 614
C WKGRDPSLPAMA GP NF PSKVSME SWYSPTSAARL SNV **C T AF T S
Sbjct: 267 LCWHCWKGRDPSLPAMAAGPPNFSPSKVSMEPSWYSPTSAARLESNVW**C*TNAFDTES 88
Query: 615 GSIAITS 635
GSIA S
Sbjct: 87 GSIASPS 67
Score = 187 bits (403), Expect = 6e-047
Identities = 82/117 (70%), Positives = 90/117 (76%)
Frame = -1 / +1
Query: 602 EGLRGALLPNVRHQPRGAGWAVPGDLHAHLRGPEVPGPVRHCRQARISPFPGLRASDRHR 423
EG+R ALLP+VR QPR AG AVPG LHAHLRG EV P RH QARISP P + A DR+R
Sbjct: 100 EGVRSALLPDVRLQPRRAGGAVPGRLHAHLRGREVRRPRRHRWQARISPLPAVPAQDRYR 279
Query: 422 RLPAIGSPGRHARLRLRFHTHRPRGAPHQVLPGIPFAAGRWVLLRAE*HVPPELWLK 252
RLPA+G+PGR RLRLR H HRPR AP QVL +PFAA LLRAE*HVPPELWL+
Sbjct: 280 RLPALGAPGRRPRLRLRHHHHRPRRAPPQVLTDVPFAASWRELLRAE*HVPPELWLR 450
Score = 108 bits (230), Expect(2) = 6e-029
Identities = 52/72 (72%), Positives = 55/72 (76%)
Frame = +2 / -2
Query: 251 SLAIVQAEHVILHEEGPSGRQQMECLGELDGVLLGAGAYGTGDEDEHASLGTRWLAVDGD 430
SL IVQAEHVILH E PS QQME L EL+GVL GAG G GDEDE A+LG R LAVDG
Sbjct: 451 SLTIVQAEHVILHVEAPSSWQQMEHL*ELEGVLAGAGGDGAGDEDEDAALGPRGLAVDGI 272
Query: 431 DLMLAGLERERS 466
DL+LA LE ERS
Sbjct: 271 DLVLALLEGERS 236
Score = 90.4 bits (191), Expect(2) = 2e-026
Identities = 37/64 (57%), Positives = 41/64 (64%)
Frame = +1 / -1
Query: 397 PGDPMAGXXXXXXXXXXPGKGEIRACRQWRTGPGTSGPRR*AWRSPGTAQPAPRGWCRTF 576
PG P AG G+GEIRAC++WR G TS PRR*AW PGTA PA RGW RT
Sbjct: 305 PGAPRAGSRRYRSCAGTAGRGEIRACQRWRRGRRTSRPRR*AWSRPGTAPPARRGWSRTS 126
Query: 577 GSNA 588
GS+A
Sbjct: 125 GSSA 114
Score = 48.3 bits (99), Expect(2) = 2e-026
Identities = 21/31 (67%), Positives = 24/31 (77%)
Frame = +1 / -1
Query: 256 SHSSGGTCHSARRRTQRPAANGMPGRT*WGA 348
+HSSGGTCHSARR + + AANG RT* GA
Sbjct: 446 NHSSGGTCHSARRSSLQLAANGTSVRT*GGA 354
Score = 39.1 bits (79), Expect(2) = 6e-029
Identities = 17/24 (70%), Positives = 21/24 (87%)
Frame = +2 / -2
Query: 536 VQPNQRRAVGVERSVVMLHEGLRY 607
VQP+QR AVGVER VV+L+E LR+
Sbjct: 166 VQPHQRGAVGVERLVVVLNERLRH 95
>gb|CA024625.1|CA024625 HZ49N10r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ49N10
5-PRIME, mRNA sequence
Length = 464
Score = 258 bits (557), Expect = 3e-068
Identities = 102/124 (82%), Positives = 116/124 (93%)
Frame = -2 / +3
Query: 625 AMDPDAVAKAFVEHYYRTFDTNRAALVGLYQETSMLTFEGQKFQGPSAIAGKLGSLPFQA 446
AMDPD+V+KAFV+HYY+TFD+NRAALVGLYQ+ SMLTFEG+KF GP+AIAGKLGSLPFQ
Sbjct: 81 AMDPDSVSKAFVQHYYQTFDSNRAALVGLYQDGSMLTFEGEKFGGPAAIAGKLGSLPFQQ 260
Query: 445 CEHQIVTVDCQPSGPQGGMLVFVSGSIRTGPEEHPIKFSQAFHLLPAAGSFFVQNDMFRL 266
C+H+I TVDCQPSGPQGG+LVFVSG+I TGP EHP+KFSQ FHLLPA GSF+VQNDMFRL
Sbjct: 261 CQHKIDTVDCQPSGPQGGVLVFVSGTITTGPGEHPLKFSQMFHLLPAGGSFYVQNDMFRL 440
Query: 265 NYG* 254
NYG*
Sbjct: 441 NYG* 452
Score = 224 bits (483), Expect = 5e-058
Identities = 98/127 (77%), Positives = 100/127 (78%)
Frame = +3 / -2
Query: 255 *P*FRRNMSFCTKKDPAAGSKWNAWENLMGCSSGPVRMEPETKTSMPPWGPDGWQSTVTI 434
*P*FRRNMSFCT K P AGSKWN ENL GCS GPV M PETKT PPWGP+GWQSTV+I
Sbjct: 451 *P*FRRNMSFCT*KLPPAGSKWNICENLRGCSPGPVVMVPETKTRTPPWGPEGWQSTVSI 272
Query: 435 *CSQAWKGRDPSLPAMADGPWNFWPSKVSMEVSWYSPTSAARLVSNVR**CSTKAFATAS 614
C WKGRDPSLPAMA GP NF PSKVSME SWYSPTSAARL SNV **C T AF T S
Sbjct: 271 LCWHCWKGRDPSLPAMAAGPPNFSPSKVSMEPSWYSPTSAARLESNVW**C*TNAFDTES 92
Query: 615 GSIAITS 635
GSIA S
Sbjct: 91 GSIASPS 71
Score = 187 bits (403), Expect = 6e-047
Identities = 82/117 (70%), Positives = 90/117 (76%)
Frame = -1 / +2
Query: 602 EGLRGALLPNVRHQPRGAGWAVPGDLHAHLRGPEVPGPVRHCRQARISPFPGLRASDRHR 423
EG+R ALLP+VR QPR AG AVPG LHAHLRG EV P RH QARISP P + A DR+R
Sbjct: 104 EGVRSALLPDVRLQPRRAGGAVPGRLHAHLRGREVRRPRRHRWQARISPLPAVPAQDRYR 283
Query: 422 RLPAIGSPGRHARLRLRFHTHRPRGAPHQVLPGIPFAAGRWVLLRAE*HVPPELWLK 252
RLPA+G+PGR RLRLR H HRPR AP QVL +PFAA LLRAE*HVPPELWL+
Sbjct: 284 RLPALGAPGRRPRLRLRHHHHRPRRAPPQVLTDVPFAASWRELLRAE*HVPPELWLR 454
Score = 109 bits (232), Expect(2) = 3e-029
Identities = 53/74 (71%), Positives = 56/74 (75%)
Frame = +2 / -1
Query: 245 RLSLAIVQAEHVILHEEGPSGRQQMECLGELDGVLLGAGAYGTGDEDEHASLGTRWLAVD 424
R SL IVQAEHVILH E PS QQME L EL+GVL GAG G GDEDE A+LG R LAVD
Sbjct: 461 RPSLTIVQAEHVILHVEAPSSWQQMEHL*ELEGVLAGAGGDGAGDEDEDAALGPRGLAVD 282
Query: 425 GDDLMLAGLERERS 466
G DL+LA LE ERS
Sbjct: 281 GIDLVLALLEGERS 240
Score = 90.4 bits (191), Expect(2) = 2e-026
Identities = 37/64 (57%), Positives = 41/64 (64%)
Frame = +1 / -3
Query: 397 PGDPMAGXXXXXXXXXXPGKGEIRACRQWRTGPGTSGPRR*AWRSPGTAQPAPRGWCRTF 576
PG P AG G+GEIRAC++WR G TS PRR*AW PGTA PA RGW RT
Sbjct: 309 PGAPRAGSRRYRSCAGTAGRGEIRACQRWRRGRRTSRPRR*AWSRPGTAPPARRGWSRTS 130
Query: 577 GSNA 588
GS+A
Sbjct: 129 GSSA 118
Score = 48.3 bits (99), Expect(2) = 2e-026
Identities = 21/31 (67%), Positives = 24/31 (77%)
Frame = +1 / -3
Query: 256 SHSSGGTCHSARRRTQRPAANGMPGRT*WGA 348
+HSSGGTCHSARR + + AANG RT* GA
Sbjct: 450 NHSSGGTCHSARRSSLQLAANGTSVRT*GGA 358
Score = 39.1 bits (79), Expect(2) = 3e-029
Identities = 17/24 (70%), Positives = 21/24 (87%)
Frame = +2 / -1
Query: 536 VQPNQRRAVGVERSVVMLHEGLRY 607
VQP+QR AVGVER VV+L+E LR+
Sbjct: 170 VQPHQRGAVGVERLVVVLNERLRH 99
>gb|BE193362.2|BE193362 HVSMEh0080L17f Hordeum vulgare 5-45 DAP spike EST library
HVcDNA0009 (5 to 45 DAP) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEh0080L17f, mRNA sequence
Length = 696
Score = 254 bits (550), Expect(2) = 1e-067
Identities = 101/126 (80%), Positives = 116/126 (92%)
Frame = -2 / +2
Query: 625 AMDPDAVAKAFVEHYYRTFDTNRAALVGLYQETSMLTFEGQKFQGPSAIAGKLGSLPFQA 446
AMDPD+V+KAFV+HYY+TFD+NRAALVGLYQ+ SMLTFEG+KF GP+AIAGKLGSLPFQ
Sbjct: 41 AMDPDSVSKAFVQHYYQTFDSNRAALVGLYQDGSMLTFEGEKFGGPAAIAGKLGSLPFQQ 220
Query: 445 CEHQIVTVDCQPSGPQGGMLVFVSGSIRTGPEEHPIKFSQAFHLLPAAGSFFVQNDMFRL 266
C+H+I TVDCQPSGPQGG+LVFV G+I TGP EHP+KFSQ HLLPA GSF+VQNDMFRL
Sbjct: 221 CQHKIDTVDCQPSGPQGGVLVFVFGTITTGPGEHPLKFSQMVHLLPAGGSFYVQNDMFRL 400
Query: 265 NYG*RQ 248
NYG*R+
Sbjct: 401 NYG*RR 418
Score = 212 bits (457), Expect = 2e-054
Identities = 94/126 (74%), Positives = 97/126 (76%)
Frame = +3 / -1
Query: 258 P*FRRNMSFCTKKDPAAGSKWNAWENLMGCSSGPVRMEPETKTSMPPWGPDGWQSTVTI* 437
P*FRRNMSFCT K P AGSK ENL GCS GPV M P+TKT PPWGP+GWQSTV+I
Sbjct: 408 P*FRRNMSFCT*KLPPAGSK*TICENLRGCSPGPVVMVPKTKTRTPPWGPEGWQSTVSIL 229
Query: 438 CSQAWKGRDPSLPAMADGPWNFWPSKVSMEVSWYSPTSAARLVSNVR**CSTKAFATASG 617
C WKGRDPSLPAMA GP NF PSKVSME SWYSPTSAARL SNV **C T AF T SG
Sbjct: 228 CWHCWKGRDPSLPAMAAGPPNFSPSKVSMEPSWYSPTSAARLESNVW**C*TNAFDTESG 49
Query: 618 SIAITS 635
SIA S
Sbjct: 48 SIASPS 31
Score = 181 bits (389), Expect = 5e-045
Identities = 82/123 (66%), Positives = 90/123 (73%)
Frame = -1 / +1
Query: 602 EGLRGALLPNVRHQPRGAGWAVPGDLHAHLRGPEVPGPVRHCRQARISPFPGLRASDRHR 423
EG+R ALLP+VR QPR AG AVPG LHAHLRG EV P RH QARISP P + A DR+R
Sbjct: 64 EGVRSALLPDVRLQPRRAGGAVPGRLHAHLRGREVRRPRRHRWQARISPLPAVPAQDRYR 243
Query: 422 RLPAIGSPGRHARLRLRFHTHRPRGAPHQVLPGIPFAAGRWVLLRAE*HVPPELWLKTAD 243
RLPA+G+PGR RLRLR H HRPR AP QVL FAA LLRAE*HVPPELW+K
Sbjct: 244 RLPALGAPGRRPRLRLRHHHHRPRRAPPQVLTDGSFAASWRELLRAE*HVPPELWVKEGR 423
Query: 242 TLV 234
L+
Sbjct: 424 PLL 432
Score = 100 bits (212), Expect(2) = 2e-026
Identities = 49/71 (69%), Positives = 52/71 (73%)
Frame = +2 / -3
Query: 254 LAIVQAEHVILHEEGPSGRQQMECLGELDGVLLGAGAYGTGDEDEHASLGTRWLAVDGDD 433
L IVQAEHVILH E PS QQM L EL+GVL GAG G DEDE A+LG R LAVDG D
Sbjct: 412 LPIVQAEHVILHVEAPSSWQQMNHL*ELEGVLAGAGGDGAEDEDEDAALGPRGLAVDGID 233
Query: 434 LMLAGLERERS 466
L+LA LE ERS
Sbjct: 232 LVLALLEGERS 200
Score = 90.4 bits (191), Expect(2) = 6e-026
Identities = 37/64 (57%), Positives = 41/64 (64%)
Frame = +1 / -2
Query: 397 PGDPMAGXXXXXXXXXXPGKGEIRACRQWRTGPGTSGPRR*AWRSPGTAQPAPRGWCRTF 576
PG P AG G+GEIRAC++WR G TS PRR*AW PGTA PA RGW RT
Sbjct: 269 PGAPRAGSRRYRSCAGTAGRGEIRACQRWRRGRRTSRPRR*AWSRPGTAPPARRGWSRTS 90
Query: 577 GSNA 588
GS+A
Sbjct: 89 GSSA 78
Score = 46.9 bits (96), Expect(2) = 6e-026
Identities = 21/32 (65%), Positives = 24/32 (75%)
Frame = +1 / -2
Query: 253 FSHSSGGTCHSARRRTQRPAANGMPGRT*WGA 348
F+HSSGGTCHSARR + + AAN RT* GA
Sbjct: 413 FTHSSGGTCHSARRSSLQLAANEPSVRT*GGA 318
Score = 39.1 bits (79), Expect(2) = 2e-026
Identities = 17/24 (70%), Positives = 21/24 (87%)
Frame = +2 / -3
Query: 536 VQPNQRRAVGVERSVVMLHEGLRY 607
VQP+QR AVGVER VV+L+E LR+
Sbjct: 130 VQPHQRGAVGVERLVVVLNERLRH 59
Score = 22.1 bits (42), Expect(2) = 1e-067
Identities = 9/15 (60%), Positives = 11/15 (73%)
Frame = -1 / +2
Query: 230 KELFKGFMLKR*ILN 186
K L +GFMLK+ I N
Sbjct: 440 KNLIRGFMLKQWISN 484
>gb|AV921719.1|AV921719 AV921719 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags12h19 3', mRNA sequence
Length = 632
Score = 256 bits (553), Expect = 1e-067
Identities = 104/137 (75%), Positives = 120/137 (87%)
Frame = -2 / -3
Query: 601 KAFVEHYYRTFDTNRAALVGLYQETSMLTFEGQKFQGPSAIAGKLGSLPFQACEHQIVTV 422
KAFV+HYY+TFD+NRAALVGLYQ+ SMLTFEG+KF GP+AIAGKLGSLPFQ C+H+I TV
Sbjct: 630 KAFVQHYYQTFDSNRAALVGLYQDGSMLTFEGEKFGGPAAIAGKLGSLPFQQCQHKIDTV 451
Query: 421 DCQPSGPQGGMLVFVSGSIRTGPEEHPIKFSQAFHLLPAAGSFFVQNDMFRLNYG*RQPI 242
DCQPSGPQGG+LVFVSG+I TGP EHP+KFSQ FHLLPA GSF+VQNDMFRLNYG* +
Sbjct: 450 DCQPSGPQGGVLVFVSGTITTGPGEHPLKFSQMFHLLPAGGSFYVQNDMFRLNYG*GRAA 271
Query: 241 LL**RNCLRVSC*NDEY 191
L +N +R C*N+EY
Sbjct: 270 TLAAKNLIRDLC*NNEY 220
Score = 228 bits (493), Expect = 2e-059
Identities = 99/139 (71%), Positives = 106/139 (76%)
Frame = +3 / +2
Query: 186 IKYSSFQHETLKQFLHHKSIGCL*P*FRRNMSFCTKKDPAAGSKWNAWENLMGCSSGPVR 365
I+YS FQH++L +F + *P*FRRNMSFCT K P AGSKWN ENL GCS GPV
Sbjct: 215 IRYSLFQHKSLIKFFAARVAALP*P*FRRNMSFCT*KLPPAGSKWNICENLRGCSPGPVV 394
Query: 366 MEPETKTSMPPWGPDGWQSTVTI*CSQAWKGRDPSLPAMADGPWNFWPSKVSMEVSWYSP 545
M PETKT PPWGP+GWQSTV+I C WKGRDPSLPAMA GP NF PSKVSME SWYSP
Sbjct: 395 MVPETKTRTPPWGPEGWQSTVSILCWHCWKGRDPSLPAMAAGPPNFSPSKVSMEPSWYSP 574
Query: 546 TSAARLVSNVR**CSTKAF 602
TSAARL SNV **C T AF
Sbjct: 575 TSAARLESNVW**C*TNAF 631
Score = 204 bits (441), Expect = 3e-052
Identities = 93/139 (66%), Positives = 103/139 (74%)
Frame = -1 / -2
Query: 602 EGLRGALLPNVRHQPRGAGWAVPGDLHAHLRGPEVPGPVRHCRQARISPFPGLRASDRHR 423
EG+R ALLP+VR QPR AG AVPG LHAHLRG EV P RH QARISP P + A DR+R
Sbjct: 631 EGVRSALLPDVRLQPRRAGGAVPGRLHAHLRGREVRRPRRHRWQARISPLPAVPAQDRYR 452
Query: 422 RLPAIGSPGRHARLRLRFHTHRPRGAPHQVLPGIPFAAGRWVLLRAE*HVPPELWLKTAD 243
RLPA+G+PGR RLRLR H HRPR AP QVL +PFAA LLRAE*HVPPELWL+
Sbjct: 451 RLPALGAPGRRPRLRLRHHHHRPRRAPPQVLTDVPFAASWRELLRAE*HVPPELWLRKGG 272
Query: 242 TLVMKELFKGFMLKR*ILN 186
KEL +GFMLK+*I N
Sbjct: 271 HSGSKELDQGFMLKQ*ISN 215
Score = 122 bits (262), Expect(2) = 2e-032
Identities = 62/94 (65%), Positives = 67/94 (71%)
Frame = +2 / +1
Query: 185 H*VFIVST*NP*TIPSSQEYRLSLAIVQAEHVILHEEGPSGRQQMECLGELDGVLLGAGA 364
H +FIVST* P + Q R SL IVQAEHVILH E PS QQME L EL+GVL GAG
Sbjct: 214 HSIFIVST*IPDQVLCCQSGRPSLTIVQAEHVILHVEAPSSWQQMEHL*ELEGVLAGAGG 393
Query: 365 YGTGDEDEHASLGTRWLAVDGDDLMLAGLERERS 466
G GDEDE A+LG R LAVDG DL+LA LE ERS
Sbjct: 394 DGAGDEDEDAALGPRGLAVDGIDLVLALLEGERS 495
Score = 90.4 bits (191), Expect(2) = 1e-030
Identities = 37/64 (57%), Positives = 41/64 (64%)
Frame = +1 / +3
Query: 397 PGDPMAGXXXXXXXXXXPGKGEIRACRQWRTGPGTSGPRR*AWRSPGTAQPAPRGWCRTF 576
PG P AG G+GEIRAC++WR G TS PRR*AW PGTA PA RGW RT
Sbjct: 426 PGAPRAGSRRYRSCAGTAGRGEIRACQRWRRGRRTSRPRR*AWSRPGTAPPARRGWSRTS 605
Query: 577 GSNA 588
GS+A
Sbjct: 606 GSSA 617
Score = 62.9 bits (131), Expect(2) = 1e-030
Identities = 28/57 (49%), Positives = 37/57 (64%)
Frame = +1 / +3
Query: 178 AATLSIHRFNMKPLNNSFITRVSAVFSHSSGGTCHSARRRTQRPAANGMPGRT*WGA 348
A++ IH FN+ P ++S + +HSSGGTCHSARR + + AANG RT* GA
Sbjct: 207 ASSFDIHCFNINP*SSSLLPEWPPFLNHSSGGTCHSARRSSLQLAANGTSVRT*GGA 377
Score = 35.9 bits (72), Expect(2) = 2e-032
Identities = 16/22 (72%), Positives = 19/22 (86%)
Frame = +2 / +1
Query: 536 VQPNQRRAVGVERSVVMLHEGL 601
VQP+QR AVGVER VV+L+E L
Sbjct: 565 VQPHQRGAVGVERLVVVLNERL 630
>gb|CK123436.1|CK123436 BES1824104a20 BES1824 Hordeum vulgare subsp. vulgare cDNA clone
MPMGp2010A204 5-PRIME, mRNA sequence
Length = 593
Score = 248 bits (536), Expect(2) = 2e-067
Identities = 100/124 (80%), Positives = 113/124 (91%)
Frame = -2 / +1
Query: 625 AMDPDAVAKAFVEHYYRTFDTNRAALVGLYQETSMLTFEGQKFQGPSAIAGKLGSLPFQA 446
AMDPD+V+KAFV+HYY+TFD+NRAALVGLYQ+ SMLTFEG+KF GP+AIAGKLGSLPFQ
Sbjct: 73 AMDPDSVSKAFVQHYYQTFDSNRAALVGLYQDGSMLTFEGEKFGGPAAIAGKLGSLPFQQ 252
Query: 445 CEHQIVTVDCQPSGPQGGMLVFVSGSIRTGPEEHPIKFSQAFHLLPAAGSFFVQNDMFRL 266
C+H+I TVD PSGPQGG+LVFVSG+I TGP EHP+KFSQ FHLLPA GSF VQNDMFRL
Sbjct: 253 CQHKIDTVDXXPSGPQGGVLVFVSGTITTGPGEHPLKFSQMFHLLPAGGSFXVQNDMFRL 432
Query: 265 NYG* 254
NYG*
Sbjct: 433 NYG* 444
Score = 218 bits (470), Expect = 3e-056
Identities = 97/127 (76%), Positives = 99/127 (77%)
Frame = +3 / -1
Query: 255 *P*FRRNMSFCTKKDPAAGSKWNAWENLMGCSSGPVRMEPETKTSMPPWGPDGWQSTVTI 434
*P*FRRNMSFCT K P AGSKWN ENL GCS GPV M PETKT PPWGP+G QSTV+I
Sbjct: 443 *P*FRRNMSFCT*KLPPAGSKWNICENLRGCSPGPVVMVPETKTRTPPWGPEGXQSTVSI 264
Query: 435 *CSQAWKGRDPSLPAMADGPWNFWPSKVSMEVSWYSPTSAARLVSNVR**CSTKAFATAS 614
C WKGRDPSLPAMA GP NF PSKVSME SWYSPTSAARL SNV **C T AF T S
Sbjct: 263 LCWHCWKGRDPSLPAMAAGPPNFSPSKVSMEPSWYSPTSAARLESNVW**C*TNAFDTES 84
Query: 615 GSIAITS 635
GSIA S
Sbjct: 83 GSIASPS 63
Score = 180 bits (388), Expect = 7e-045
Identities = 80/117 (68%), Positives = 88/117 (75%)
Frame = -1 / +3
Query: 602 EGLRGALLPNVRHQPRGAGWAVPGDLHAHLRGPEVPGPVRHCRQARISPFPGLRASDRHR 423
EG+R ALLP+VR QPR AG AVPG LHAHLRG EV P RH QARISP P + A DR+R
Sbjct: 96 EGVRSALLPDVRLQPRRAGGAVPGRLHAHLRGREVRRPRRHRWQARISPLPAVPAQDRYR 275
Query: 422 RLPAIGSPGRHARLRLRFHTHRPRGAPHQVLPGIPFAAGRWVLLRAE*HVPPELWLK 252
RL A+G+PGR RLRLR H HRPR AP QVL +PFAA LL AE*HVPPELWL+
Sbjct: 276 RLXALGAPGRRPRLRLRHHHHRPRRAPPQVLTDVPFAASWRELLXAE*HVPPELWLR 446
Score = 109 bits (233), Expect(3) = 9e-030
Identities = 53/77 (68%), Positives = 56/77 (72%)
Frame = +2 / -3
Query: 236 QEYRLSLAIVQAEHVILHEEGPSGRQQMECLGELDGVLLGAGAYGTGDEDEHASLGTRWL 415
Q R SL IVQAEHVILH E PS QQME L EL+GVL GAG G GDEDE A+LG R L
Sbjct: 462 QSXRPSLTIVQAEHVILHXEAPSSWQQMEHL*ELEGVLAGAGGDGAGDEDEDAALGPRGL 283
Query: 416 AVDGDDLMLAGLERERS 466
VDG DL+LA LE ERS
Sbjct: 282 XVDGIDLVLALLEGERS 232
Score = 87.2 bits (184), Expect(2) = 1e-024
Identities = 36/64 (56%), Positives = 40/64 (62%)
Frame = +1 / -2
Query: 397 PGDPMAGXXXXXXXXXXPGKGEIRACRQWRTGPGTSGPRR*AWRSPGTAQPAPRGWCRTF 576
PG P A G+GEIRAC++WR G TS PRR*AW PGTA PA RGW RT
Sbjct: 301 PGAPRAXSRRYRSCAGTAGRGEIRACQRWRRGRRTSRPRR*AWSRPGTAPPARRGWSRTS 122
Query: 577 GSNA 588
GS+A
Sbjct: 121 GSSA 110
Score = 45.5 bits (93), Expect(2) = 1e-024
Identities = 20/31 (64%), Positives = 23/31 (74%)
Frame = +1 / -2
Query: 256 SHSSGGTCHSARRRTQRPAANGMPGRT*WGA 348
+HSSGGTCHSA R + + AANG RT* GA
Sbjct: 442 NHSSGGTCHSAXRSSLQLAANGTSVRT*GGA 350
Score = 39.1 bits (79), Expect(3) = 9e-030
Identities = 17/24 (70%), Positives = 21/24 (87%)
Frame = +2 / -3
Query: 536 VQPNQRRAVGVERSVVMLHEGLRY 607
VQP+QR AVGVER VV+L+E LR+
Sbjct: 162 VQPHQRGAVGVERLVVVLNERLRH 91
Score = 28.1 bits (55), Expect(2) = 2e-067
Identities = 13/21 (61%), Positives = 16/21 (76%)
Frame = -1 / +1
Query: 248 ADTLVMKELFKGFMLKR*ILN 186
A TL K+L +GFMLK+*I N
Sbjct: 451 AXTLAAKKLDQGFMLKQ*ISN 513
Score = 21.7 bits (41), Expect(3) = 9e-030
Identities = 8/14 (57%), Positives = 11/14 (78%)
Frame = +3 / -3
Query: 186 IKYSSFQHETLKQF 227
I YS FQH++L +F
Sbjct: 513 IXYSLFQHKSLIKF 472
>gb|BM101388.2|BM101388 EBpi01_SQ003_L07_R pistil, 1 DPA, no treatment, cv Optic, EBpi01
Hordeum vulgare subsp. vulgare cDNA clone
EBpi01_SQ003_L07 5', mRNA sequence
Length = 519
Score = 225 bits (485), Expect(2) = 4e-066
Identities = 93/123 (75%), Positives = 106/123 (86%)
Frame = -2 / +1
Query: 559 RAALVGLYQETSMLTFEGQKFQGPSAIAGKLGSLPFQACEHQIVTVDCQPSGPQGGMLVF 380
RAALVGLYQ+ SMLTFEG+KF GP+AIAGKLGSLPFQ C+H+I TVDCQPSGPQGG+LVF
Sbjct: 127 RAALVGLYQDGSMLTFEGEKFGGPAAIAGKLGSLPFQQCQHKIDTVDCQPSGPQGGVLVF 306
Query: 379 VSGSIRTGPEEHPIKFSQAFHLLPAAGSFFVQNDMFRLNYG*RQPILL**RNCLRVSC*N 200
VSG+I TGP EHP+KFSQ FHLLPA GSF+VQNDMFRLNYG* + L +N +R C*N
Sbjct: 307 VSGTITTGPGEHPLKFSQMFHLLPAGGSFYVQNDMFRLNYG*GRAATLAAKNLIRDLC*N 486
Query: 199 DEY 191
+EY
Sbjct: 487 NEY 495
Score = 212 bits (458), Expect(2) = 2e-057
Identities = 89/125 (71%), Positives = 96/125 (76%)
Frame = +3 / -2
Query: 186 IKYSSFQHETLKQFLHHKSIGCL*P*FRRNMSFCTKKDPAAGSKWNAWENLMGCSSGPVR 365
I+YS FQH++L +F + *P*FRRNMSFCT K P AGSKWN ENL GCS GPV
Sbjct: 500 IRYSLFQHKSLIKFFAARVAALP*P*FRRNMSFCT*KLPPAGSKWNICENLRGCSPGPVV 321
Query: 366 MEPETKTSMPPWGPDGWQSTVTI*CSQAWKGRDPSLPAMADGPWNFWPSKVSMEVSWYSP 545
M PETKT PPWGP+GWQSTV+I C WKGRDPSLPAMA GP NF PSKVSME SWYSP
Sbjct: 320 MVPETKTRTPPWGPEGWQSTVSILCWHCWKGRDPSLPAMAAGPPNFSPSKVSMEPSWYSP 141
Query: 546 TSAAR 560
TSAAR
Sbjct: 140 TSAAR 126
Score = 179 bits (386), Expect = 1e-044
Identities = 82/124 (66%), Positives = 90/124 (72%)
Frame = -1 / +3
Query: 557 RGAGWAVPGDLHAHLRGPEVPGPVRHCRQARISPFPGLRASDRHRRLPAIGSPGRHARLR 378
R AG AVPG LHAHLRG EV P RH QARISP P + A DR+RRLPA+G+PGR RLR
Sbjct: 129 RRAGGAVPGRLHAHLRGREVRRPRRHRWQARISPLPAVPAQDRYRRLPALGAPGRRPRLR 308
Query: 377 LRFHTHRPRGAPHQVLPGIPFAAGRWVLLRAE*HVPPELWLKTADTLVMKELFKGFMLKR 198
LR H HRPR AP QVL +PFAA LLRAE*HVPPELWL+ KEL +GFMLK+
Sbjct: 309 LRHHHHRPRRAPPQVLTDVPFAASWRELLRAE*HVPPELWLRKGGHSGSKELDQGFMLKQ 488
Query: 197 *ILN 186
*I N
Sbjct: 489 *ISN 500
Score = 122 bits (262), Expect = 2e-027
Identities = 62/94 (65%), Positives = 67/94 (71%)
Frame = +2 / -1
Query: 185 H*VFIVST*NP*TIPSSQEYRLSLAIVQAEHVILHEEGPSGRQQMECLGELDGVLLGAGA 364
H +FIVST* P + Q R SL IVQAEHVILH E PS QQME L EL+GVL GAG
Sbjct: 501 HSIFIVST*IPDQVLCCQSGRPSLTIVQAEHVILHVEAPSSWQQMEHL*ELEGVLAGAGG 322
Query: 365 YGTGDEDEHASLGTRWLAVDGDDLMLAGLERERS 466
G GDEDE A+LG R LAVDG DL+LA LE ERS
Sbjct: 321 DGAGDEDEDAALGPRGLAVDGIDLVLALLEGERS 220
Score = 72.5 bits (152), Expect(2) = 2e-025
Identities = 30/54 (55%), Positives = 33/54 (61%)
Frame = +1 / -3
Query: 397 PGDPMAGXXXXXXXXXXPGKGEIRACRQWRTGPGTSGPRR*AWRSPGTAQPAPR 558
PG P AG G+GEIRAC++WR G TS PRR*AW PGTA PA R
Sbjct: 289 PGAPRAGSRRYRSCAGTAGRGEIRACQRWRRGRRTSRPRR*AWSRPGTAPPARR 128
Score = 62.9 bits (131), Expect(2) = 2e-025
Identities = 28/57 (49%), Positives = 37/57 (64%)
Frame = +1 / -3
Query: 178 AATLSIHRFNMKPLNNSFITRVSAVFSHSSGGTCHSARRRTQRPAANGMPGRT*WGA 348
A++ IH FN+ P ++S + +HSSGGTCHSARR + + AANG RT* GA
Sbjct: 508 ASSFDIHCFNINP*SSSLLPEWPPFLNHSSGGTCHSARRSSLQLAANGTSVRT*GGA 338
Score = 46.9 bits (96), Expect(2) = 4e-066
Identities = 16/21 (76%), Positives = 21/21 (100%)
Frame = -2 / +3
Query: 625 AMDPDAVAKAFVEHYYRTFDT 563
AMDPD+V+KAFV+HYY+TFD+
Sbjct: 60 AMDPDSVSKAFVQHYYQTFDS 122
Score = 30.4 bits (60), Expect(2) = 2e-057
Identities = 17/32 (53%), Positives = 19/32 (59%)
Frame = +3 / -3
Query: 540 SPTSAARLVSNVR**CSTKAFATASGSIAITS 635
+P + SNV **C T AF T SGSIA S
Sbjct: 145 APPARREKESNVW**C*TNAFDTESGSIASPS 50
>gb|BU978165.1|BU978165 HA12L01r HA Hordeum vulgare subsp. vulgare cDNA clone HA12L01
5-PRIME, mRNA sequence
Length = 466
Score = 248 bits (537), Expect = 2e-065
Identities = 98/120 (81%), Positives = 112/120 (93%)
Frame = -2 / +2
Query: 625 AMDPDAVAKAFVEHYYRTFDTNRAALVGLYQETSMLTFEGQKFQGPSAIAGKLGSLPFQA 446
AMDPD+V+KAFV+HYY+TFD+NRAALVGLYQ+ SMLTFEG+KF GP+AIAGKLGSLPFQ
Sbjct: 107 AMDPDSVSKAFVQHYYQTFDSNRAALVGLYQDGSMLTFEGEKFGGPAAIAGKLGSLPFQQ 286
Query: 445 CEHQIVTVDCQPSGPQGGMLVFVSGSIRTGPEEHPIKFSQAFHLLPAAGSFFVQNDMFRL 266
C+H+I TVDCQPSGPQGG+LVFVSG+I TGP EHP+KFSQ FHLLPA GSF+VQNDMFRL
Sbjct: 287 CQHKIDTVDCQPSGPQGGVLVFVSGTITTGPGEHPLKFSQMFHLLPAGGSFYVQNDMFRL 466
Score = 217 bits (468), Expect = 6e-056
Identities = 94/123 (76%), Positives = 96/123 (78%)
Frame = +3 / -2
Query: 267 RRNMSFCTKKDPAAGSKWNAWENLMGCSSGPVRMEPETKTSMPPWGPDGWQSTVTI*CSQ 446
RRNMSFCT K P AGSKWN ENL GCS GPV M PETKT PPWGP+GWQSTV+I C
Sbjct: 465 RRNMSFCT*KLPPAGSKWNICENLRGCSPGPVVMVPETKTRTPPWGPEGWQSTVSILCWH 286
Query: 447 AWKGRDPSLPAMADGPWNFWPSKVSMEVSWYSPTSAARLVSNVR**CSTKAFATASGSIA 626
WKGRDPSLPAMA GP NF PSKVSME SWYSPTSAARL SNV **C T AF T SGSIA
Sbjct: 285 CWKGRDPSLPAMAAGPPNFSPSKVSMEPSWYSPTSAARLESNVW**C*TNAFDTESGSIA 106
Query: 627 ITS 635
S
Sbjct: 105 SPS 97
Score = 175 bits (377), Expect = 2e-043
Identities = 78/112 (69%), Positives = 85/112 (75%)
Frame = -1 / +1
Query: 602 EGLRGALLPNVRHQPRGAGWAVPGDLHAHLRGPEVPGPVRHCRQARISPFPGLRASDRHR 423
EG+R ALLP+VR QPR AG AVPG LHAHLRG EV P RH QARISP P + A DR+R
Sbjct: 130 EGVRSALLPDVRLQPRRAGGAVPGRLHAHLRGREVRRPRRHRWQARISPLPAVPAQDRYR 309
Query: 422 RLPAIGSPGRHARLRLRFHTHRPRGAPHQVLPGIPFAAGRWVLLRAE*HVPP 267
RLPA+G+PGR RLRLR H HRPR AP QVL +PFAA LLRAE*HVPP
Sbjct: 310 RLPALGAPGRRPRLRLRHHHHRPRRAPPQVLTDVPFAASWRELLRAE*HVPP 465
Score = 100 bits (214), Expect(2) = 9e-027
Identities = 48/67 (71%), Positives = 51/67 (76%)
Frame = +2 / -1
Query: 266 QAEHVILHEEGPSGRQQMECLGELDGVLLGAGAYGTGDEDEHASLGTRWLAVDGDDLMLA 445
QAEHVILH E PS QQME L EL+GVL GAG G GDEDE A+LG R LAVDG DL+LA
Sbjct: 466 QAEHVILHVEAPSSWQQMEHL*ELEGVLAGAGGDGAGDEDEDAALGPRGLAVDGIDLVLA 287
Query: 446 GLERERS 466
LE ERS
Sbjct: 286 LLEGERS 266
Score = 90.4 bits (191), Expect(2) = 5e-024
Identities = 37/64 (57%), Positives = 41/64 (64%)
Frame = +1 / -3
Query: 397 PGDPMAGXXXXXXXXXXPGKGEIRACRQWRTGPGTSGPRR*AWRSPGTAQPAPRGWCRTF 576
PG P AG G+GEIRAC++WR G TS PRR*AW PGTA PA RGW RT
Sbjct: 335 PGAPRAGSRRYRSCAGTAGRGEIRACQRWRRGRRTSRPRR*AWSRPGTAPPARRGWSRTS 156
Query: 577 GSNA 588
GS+A
Sbjct: 155 GSSA 144
Score = 40.5 bits (82), Expect(2) = 5e-024
Identities = 18/27 (66%), Positives = 20/27 (74%)
Frame = +1 / -3
Query: 268 GGTCHSARRRTQRPAANGMPGRT*WGA 348
GGTCHSARR + + AANG RT* GA
Sbjct: 464 GGTCHSARRSSLQLAANGTSVRT*GGA 384
Score = 39.1 bits (79), Expect(2) = 9e-027
Identities = 17/24 (70%), Positives = 21/24 (87%)
Frame = +2 / -1
Query: 536 VQPNQRRAVGVERSVVMLHEGLRY 607
VQP+QR AVGVER VV+L+E LR+
Sbjct: 196 VQPHQRGAVGVERLVVVLNERLRH 125
Database: Hordeum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:16 PM
Number of letters in database: 175,134,539
Number of sequences in database: 312,970
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 339,212,299
Number of Sequences: 312970
Number of extensions: 5804553
Number of successful extensions: 93050
Number of sequences better than 1.0e-020: 134
length of database: 58,378,179
effective HSP length: 51
effective length of database: 42,416,709
effective search space used: 8483341800
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)