TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2441114.2.1
(964 letters)
Database: Hordeum_nucl_with_EST.fasta
312,970 sequences; 175,134,539 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BI960615.1|BI960615 HVSMEn0025G06f Hordeum vulgare rachi... 392 e-108
gb|BI960464.1|BI960464 HVSMEn0024L03f Hordeum vulgare rachi... 389 e-107
gb|BF257828.2|BF257828 HVSMEf0013P18f Hordeum vulgare seedl... 383 e-107
gb|BU983853.1|BU983853 HA31D22r HA Hordeum vulgare subsp. v... 363 e-100
gb|BI960304.1|BI960304 HVSMEn0024C15f Hordeum vulgare rachi... 342 6e-099
gb|BI951506.1|BI951506 HVSMEm0001C21f Hordeum vulgare green... 353 9e-097
gb|BG301108.1|BG301108 HVSMEb0019J09f Hordeum vulgare seedl... 341 3e-093
gb|BU985248.1|BU985248 HF06J04r HF Hordeum vulgare subsp. v... 341 3e-093
gb|BG299732.1|BG299732 HVSMEa0021J11f Hordeum vulgare seedl... 332 1e-090
gb|CB879366.1|CB879366 HP11O20T HP Hordeum vulgare subsp. v... 321 4e-087
gb|BU980638.1|BU980638 HA21D22r HA Hordeum vulgare subsp. v... 315 2e-085
gb|BI948142.1|BI948142 HVSMEl0008F18f Hordeum vulgare spike... 202 4e-081
gb|BM443592.2|BM443592 EBro02_SQ005_M20_R root, 3 week, hyd... 297 6e-080
gb|BG299768.1|BG299768 HVSMEa0021L17f Hordeum vulgare seedl... 209 2e-075
gb|BM374974.1|BM374974 EBma05_SQ003_O08_R maternal, 12 DPA,... 281 4e-075
gb|CB877294.1|CB877294 HP04E23T HP Hordeum vulgare subsp. v... 201 3e-073
gb|BF254992.2|BF254992 HVSMEf0005K05f Hordeum vulgare seedl... 192 3e-069
gb|BM371440.2|BM371440 EBma08_SQ002_L23_R maternal, 28 DPA,... 261 4e-069
gb|BQ756652.1|BQ756652 EBem09_SQ003_F19_R embryo, 1 Day ger... 261 4e-069
gb|BM377955.2|BM377955 EBem04_SQ004_L07_R embryo, 12 DPA, n... 165 8e-068
gb|AL503647.1|AL503647 AL503647 Hordeum vulgare Barke roots... 116 1e-065
gb|BG300671.1|BG300671 HVSMEb0017O17f Hordeum vulgare seedl... 244 2e-064
gb|BI780970.2|BI780970 EBma03_SQ001_A07_R maternal, 8 DPA, ... 239 2e-062
gb|BF266201.2|BF266201 HV_CEa0014H09f Hordeum vulgare seedl... 167 2e-061
gb|BM369928.2|BM369928 EBro08_SQ002_F21_R root, 3 week, dro... 159 4e-059
gb|BF622794.2|BF622794 HVSMEa0008O10f Hordeum vulgare seedl... 182 5e-058
gb|BF260484.1|BF260484 HVSMEf0022C02f Hordeum vulgare seedl... 148 3e-057
gb|BF622781.2|BF622781 HVSMEa0008M06f Hordeum vulgare seedl... 160 3e-054
gb|BM442858.2|BM442858 EBro02_SQ001_J09_R root, 3 week, hyd... 210 7e-054
gb|BF621463.3|BF621463 HVSMEa0011B06f Hordeum vulgare seedl... 170 8e-054
gb|BF260943.3|BF260943 HVSMEf0023F15f Hordeum vulgare seedl... 167 5e-053
gb|BG414812.2|BG414812 HVSMEk0003M24f Hordeum vulgare testa... 202 2e-051
gb|BF255030.2|BF255030 HVSMEf0005L23f Hordeum vulgare seedl... 138 5e-050
gb|BQ462713.1|BQ462713 HI01M13T HI Hordeum vulgare subsp. v... 111 4e-048
gb|BI951063.1|BI951063 HVSMEl0024E03f Hordeum vulgare spike... 116 1e-046
gb|AV927067.1|AV927067 AV927067 K. Sato unpublished cDNA li... 183 1e-045
gb|BM443151.2|BM443151 EBro02_SQ002_M05_R root, 3 week, hyd... 108 2e-045
gb|BM374970.1|BM374970 EBma05_SQ003_O01_R maternal, 12 DPA,... 145 3e-045
gb|BQ469266.1|BQ469266 HM03O09r HM Hordeum vulgare subsp. v... 178 4e-044
gb|BQ661537.1|BQ661537 HM03O09u HM Hordeum vulgare subsp. v... 178 4e-044
gb|BG366911.1|BG366911 HVSMEi0008P02f Hordeum vulgare 20 DA... 99 3e-042
gb|BM440840.2|BM440840 EBca01_SQ001_F05_R carpel, pre-anthe... 169 3e-041
gb|BQ660284.1|BQ660284 HI01M13w HI Hordeum vulgare subsp. v... 151 4e-036
gb|BF253467.3|BF253467 HVSMEf0001I01f Hordeum vulgare seedl... 92 5e-036
gb|BI957748.1|BI957748 HVSMEn0011A02f Hordeum vulgare rachi... 143 1e-035
gb|BQ460085.1|BQ460085 HA07E05r HA Hordeum vulgare subsp. v... 145 3e-034
gb|BU975019.1|BU975019 HB29N13r BC Hordeum vulgare subsp. v... 140 1e-032
gb|BE455468.2|BE455468 HVSMEg0017E23f Hordeum vulgare pre-a... 84 6e-032
gb|AL501067.1|AL501067 AL501067 Hordeum vulgare Barke roots... 93 2e-029
gb|BQ657721.1|BQ657721 HA07E05u HA Hordeum vulgare subsp. v... 127 7e-029
gb|AJ435127.1|AJ435127 AJ435127 S00002 Hordeum vulgare subs... 89 5e-028
gb|AJ462473.1|AJ462473 AJ462473 S00002 Hordeum vulgare subs... 87 2e-027
gb|AV911241.1|AV911241 AV911241 K. Sato unpublished cDNA li... 113 2e-024
gb|AV911423.1|AV911423 AV911423 K. Sato unpublished cDNA li... 113 2e-024
gb|AV911857.1|AV911857 AV911857 K. Sato unpublished cDNA li... 113 2e-024
gb|AV909530.1|AV909530 AV909530 K. Sato unpublished cDNA li... 107 8e-023
gb|BF630096.2|BF630096 HVSMEb0007P05f Hordeum vulgare seedl... 74 6e-021
>gb|BI960615.1|BI960615 HVSMEn0025G06f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0025G06f, mRNA sequence
Length = 653
Score = 392 bits (851), Expect = e-108
Identities = 160/192 (83%), Positives = 170/192 (88%)
Frame = +1 / +1
Query: 91 SGHRSSETSPMAVKIYVVYYSMYGHVGKLADEIKKGALSVEGVEAKIWQVPEILSEEVLG 270
S RSS PMAVK+YVVYYSMYGHV KLADEIKKGA SVEGVE K+WQVPEIL+EEVLG
Sbjct: 73 SDPRSSHAPPMAVKVYVVYYSMYGHVAKLADEIKKGASSVEGVEVKVWQVPEILNEEVLG 252
Query: 271 KMGAPPKPDVPVITPQELAEADGILFGFPTRFGMMAAQMKAFFDATGGLWREQSLAGKPA 450
KMGAPPK DVPVI+PQELAEADG+LFGFPTRFGMMAAQMKAFFDATGGLWREQSLAGKPA
Sbjct: 253 KMGAPPKTDVPVISPQELAEADGVLFGFPTRFGMMAAQMKAFFDATGGLWREQSLAGKPA 432
Query: 451 GMFFSXXXXXXXXXXXPLTAITQLTHHGMVFVPVGYTFGAKLFGMDQVQGGSPYGAGTFA 630
G+FFS PLTA+TQLTHHGMVFVPVGYTFGAK+F MD+VQGGSPYGAGTFA
Sbjct: 433 GVFFSTGTQGGGQETTPLTAVTQLTHHGMVFVPVGYTFGAKMFDMDKVQGGSPYGAGTFA 612
Query: 631 ADGSRWPSEVEL 666
DGSRWPSE+EL
Sbjct: 613 GDGSRWPSEMEL 648
Score = 213 bits (459), Expect(2) = 5e-077
Identities = 97/121 (80%), Positives = 102/121 (84%)
Frame = -3 / -1
Query: 464 LKNMPAGLPARLCSLQSPPVASKNAFI*AAIIPNLVGNPKRIPSASASSCGVMTGTSGLG 285
LKN PAGLPARLCSL SPPVASKNAFI AAI+PNLVGNP R PSASASS G +TGTS LG
Sbjct: 446 LKNTPAGLPARLCSLHSPPVASKNAFICAAIMPNLVGNPNRTPSASASS*GEITGTSVLG 267
Query: 284 GAPIFPSTSSERISGTCHILASTPSTDKAPFLISSASLPTCPYME*YTT*ILTAIGEVSE 105
GAPI P TSS RISGTCH L STPST++APFLISSASL T PYME*YTT* LTA+G E
Sbjct: 266 GAPILPRTSSFRISGTCHTLTSTPSTEEAPFLISSASLAT*PYME*YTT*TLTAMGGAWE 87
Query: 104 L 102
L
Sbjct: 86 L 84
Score = 187 bits (402), Expect(2) = 6e-051
Identities = 80/141 (56%), Positives = 102/141 (72%)
Frame = -2 / -3
Query: 522 QLGNRRQRCSLLATTLGSSAEEHAGRLASEALLPPEPTGGIEERLHLSCHHSEPCRKPKE 343
QLG+ QR LL LG+ AEEHA RLA +ALLPP+P +EERLHL HH+EP R+P++
Sbjct: 504 QLGHCCQRRRLLPAALGARAEEHARRLAGQALLPPQPARRVEERLHLRRHHAEPRREPEQ 325
Query: 342 DTVSLCKFLRCDDWHVGLRGRAHLSKHFFRENFRDLPYLSLNTFNR*GTFLDLVS*FANM 163
D V L + LR D HVGL HL+K F ++ RDLP+ +L+ FNR TFLDL+S* +NM
Sbjct: 324 DAVGLRQLLRGDHRHVGLGWGTHLAKDFLVQDLRDLPHFNLHAFNRGSTFLDLIS*LSNM 145
Query: 162 PIHGIVHNVDLNRHWRGLGAP 100
IHG+VH+VDL+RH R +GAP
Sbjct: 144 TIHGVVHDVDLDRHGRRVGAP 82
Score = 182 bits (391), Expect = 4e-045
Identities = 92/172 (53%), Positives = 108/172 (62%)
Frame = +3 / +3
Query: 96 SQELRDLSNGG*DLRCVLFHVWACWQTS*RDQERCLIC*RC*G*DMAGP*NSL*RSAWKD 275
S EL S+GG LR VL HVW+C S* DQERC +C*R G* +AGP*+ S W+D
Sbjct: 78 SAELPRASHGGQGLRRVLLHVWSCC*AS**DQERCFLC*RRGG*SVAGP*DPERGSPWQD 257
Query: 276 GRAP*ARRASHHTAGTCRG*RYPLWVSDKVRNDGSSDEGVLRCHRWALEGAEPRWQACRH 455
G RRA +G G R P+ V D+VR+DG +DEGVLR A+EGAEP QA
Sbjct: 258 GCPTQDRRAGDLPSGAGGGRRRPVRVPDEVRHDGGADEGVLRRDGRAVEGAEPGRQAGGR 437
Query: 456 VLQHWNPGWWPRDYTADGDYPADAPRHGVCARGLHLRRQAVRHGPGPGWQPL 611
VLQH +PG D AD PAD PRHGV A G+H+RRQ VRHG G G QP+
Sbjct: 438 VLQHGHPGRRAGDDAADSSDPADPPRHGVRAGGVHVRRQDVRHGQGAGRQPV 593
Score = 113 bits (242), Expect(2) = 7e-036
Identities = 56/102 (54%), Positives = 66/102 (64%)
Frame = +2 / +2
Query: 95 VTGAPRPLQWRLRSTLCTIPCMGMLAN*LTRSRKVPYLLKVLRLRYGRSLKFSLKKCLER 274
+ GAP L WR RST CT PCM ML +*L RSRKV LLK RL+ GRSL+ +K L R
Sbjct: 77 IRGAPTRLPWRSRSTSCTTPCMVMLLS*LMRSRKVLPLLKAWRLKCGRSLRS*TRKSLAR 256
Query: 275 WARPLSPTCQSSHRRNLQRLTVSSLGFRQGSE*WQLR*RRSS 400
W PTC+ S R+ +R T S G R+GS *W+ R*RRSS
Sbjct: 257 WVPHPRPTCR*SPLRSWRRPTASCSGSRRGSA*WRRR*RRSS 382
Score = 98.2 bits (208), Expect(2) = 1e-025
Identities = 52/98 (53%), Positives = 59/98 (60%)
Frame = -1 / -2
Query: 433 GSAPSRAHRWHRRTPSSELPSFRTLSETQRGYRQPLQVPAV**LARRA*GARPSFQALLQ 254
GSAPS A RRTPSS PS RT S T+ G R+P P ARR+ PS Q L +
Sbjct: 415 GSAPSTARPSRRRTPSSAPPSCRTSSGTRTGRRRPPPAPEGRSPARRSWVGHPSCQGLPR 236
Query: 253 REFQGPAIS*PQHLQQIRHLS*SRQLVCQHAHTWNSTQ 140
QGPA *P LQQ +HLS*S QL QH HTW+ST+
Sbjct: 235 SGSQGPATL*PPRLQQRKHLS*SHQLA*QHDHTWSSTR 122
Score = 95.5 bits (202), Expect(2) = 5e-077
Identities = 41/53 (77%), Positives = 41/53 (77%)
Frame = -3 / -1
Query: 665 SSTSLGHLDPSAANVPAP*GLPPWTWSMPNSLAPKV*PTGTNTMPWCVSWVIA 507
SS S GHLDPS ANVPAP GLPP T SM N LAP V PTGTNTMPW VSWV A
Sbjct: 647 SSISDGHLDPSPANVPAPYGLPPCTLSMSNILAPNVYPTGTNTMPWWVSWVTA 489
Score = 59.7 bits (124), Expect(2) = 7e-036
Identities = 21/47 (44%), Positives = 21/47 (44%)
Frame = +2 / +2
Query: 527 TTAWCLCPWATPSAPSCSAWXXXXXXXXXXXXXXXXXXXGGRARWSW 667
TTAWC C W T SAP CS W GGR RWSW
Sbjct: 509 TTAWCSCRWGTRSAPRCSTWTRCRAAARTGPARSPGTGRGGRPRWSW 649
Score = 38.6 bits (78), Expect(2) = 1e-025
Identities = 13/35 (37%), Positives = 16/35 (45%)
Frame = -1 / -2
Query: 577 TAWRRRCSPRAQTPCRXXXXXXXXXXXXXXGHHPG 473
T+WRR C+P A+TPCR PG
Sbjct: 559 TSWRRTCTPPARTPCRGGSAGSLLSAASSPARRPG 455
Score = 34.5 bits (69), Expect(2) = 6e-051
Identities = 16/32 (50%), Positives = 16/32 (50%)
Frame = -2 / -3
Query: 666 QLHLARPPRPXXXXXXXXXXXATLDLVHAEQL 571
QLHL RPPRP A L LVH E L
Sbjct: 648 QLHLGRPPRPVPGERAGPVRAAALHLVHVEHL 553
>gb|BI960464.1|BI960464 HVSMEn0024L03f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0024L03f, mRNA sequence
Length = 650
Score = 389 bits (843), Expect = e-107
Identities = 159/196 (81%), Positives = 169/196 (86%)
Frame = +1 / +3
Query: 91 SGHRSSETSPMAVKIYVVYYSMYGHVGKLADEIKKGALSVEGVEAKIWQVPEILSEEVLG 270
S RSS PMAVK+YVVYYSMYGHV KLADEIKKGA SVEGVE K+WQVPEIL+EEVLG
Sbjct: 63 SDPRSSHAPPMAVKVYVVYYSMYGHVAKLADEIKKGASSVEGVEVKVWQVPEILNEEVLG 242
Query: 271 KMGAPPKPDVPVITPQELAEADGILFGFPTRFGMMAAQMKAFFDATGGLWREQSLAGKPA 450
KMGAPPK DVPVI+PQELAEADG+LFGFPTRFGMMAAQMKAFFDATGGLWREQSLAGKPA
Sbjct: 243 KMGAPPKTDVPVISPQELAEADGVLFGFPTRFGMMAAQMKAFFDATGGLWREQSLAGKPA 422
Query: 451 GMFFSXXXXXXXXXXXPLTAITQLTHHGMVFVPVGYTFGAKLFGMDQVQGGSPYGAGTFA 630
G+FFS PLTA+TQLTHHGMVFVPVGYTF AK+F MDQVQG PY AGTFA
Sbjct: 423 GVFFSTGTQGGGQETTPLTAVTQLTHHGMVFVPVGYTFXAKMFDMDQVQGRXPYRAGTFA 602
Query: 631 ADGSRWPSEVELEHAF 678
DGS+WPSE+EL HAF
Sbjct: 603 GDGSKWPSEIELGHAF 650
Score = 213 bits (459), Expect(2) = 5e-077
Identities = 97/121 (80%), Positives = 102/121 (84%)
Frame = -3 / -2
Query: 464 LKNMPAGLPARLCSLQSPPVASKNAFI*AAIIPNLVGNPKRIPSASASSCGVMTGTSGLG 285
LKN PAGLPARLCSL SPPVASKNAFI AAI+PNLVGNP R PSASASS G +TGTS LG
Sbjct: 436 LKNTPAGLPARLCSLHSPPVASKNAFICAAIMPNLVGNPNRTPSASASS*GEITGTSVLG 257
Query: 284 GAPIFPSTSSERISGTCHILASTPSTDKAPFLISSASLPTCPYME*YTT*ILTAIGEVSE 105
GAPI P TSS RISGTCH L STPST++APFLISSASL T PYME*YTT* LTA+G E
Sbjct: 256 GAPILPRTSSFRISGTCHTLTSTPSTEEAPFLISSASLAT*PYME*YTT*TLTAMGGAWE 77
Query: 104 L 102
L
Sbjct: 76 L 74
Score = 187 bits (402), Expect = 1e-046
Identities = 80/141 (56%), Positives = 102/141 (72%)
Frame = -2 / -1
Query: 522 QLGNRRQRCSLLATTLGSSAEEHAGRLASEALLPPEPTGGIEERLHLSCHHSEPCRKPKE 343
QLG+ QR LL LG+ AEEHA RLA +ALLPP+P +EERLHL HH+EP R+P++
Sbjct: 494 QLGHCCQRRRLLPAALGARAEEHARRLAGQALLPPQPARRVEERLHLRRHHAEPRREPEQ 315
Query: 342 DTVSLCKFLRCDDWHVGLRGRAHLSKHFFRENFRDLPYLSLNTFNR*GTFLDLVS*FANM 163
D V L + LR D HVGL HL+K F ++ RDLP+ +L+ FNR TFLDL+S* +NM
Sbjct: 314 DAVGLRQLLRGDHRHVGLGWGTHLAKDFLVQDLRDLPHFNLHAFNRGSTFLDLIS*LSNM 135
Query: 162 PIHGIVHNVDLNRHWRGLGAP 100
IHG+VH+VDL+RH R +GAP
Sbjct: 134 TIHGVVHDVDLDRHGRRVGAP 72
Score = 178 bits (383), Expect = 4e-044
Identities = 91/172 (52%), Positives = 106/172 (61%)
Frame = +3 / +2
Query: 96 SQELRDLSNGG*DLRCVLFHVWACWQTS*RDQERCLIC*RC*G*DMAGP*NSL*RSAWKD 275
S EL S+GG LR VL HVW+C S* DQERC +C*R G* +AGP*+ S W+D
Sbjct: 68 SAELPRASHGGQGLRRVLLHVWSCC*AS**DQERCFLC*RRGG*SVAGP*DPERGSPWQD 247
Query: 276 GRAP*ARRASHHTAGTCRG*RYPLWVSDKVRNDGSSDEGVLRCHRWALEGAEPRWQACRH 455
G RRA +G G R P+ V D+VR+DG +DEGVLR A+EGAEP QA
Sbjct: 248 GCPTQDRRAGDLPSGAGGGRRRPVRVPDEVRHDGGADEGVLRRDGRAVEGAEPGRQAGGR 427
Query: 456 VLQHWNPGWWPRDYTADGDYPADAPRHGVCARGLHLRRQAVRHGPGPGWQPL 611
VLQH +PG D AD PAD PRHGV A G+H+ RQ VRHGP G PL
Sbjct: 428 VLQHGHPGRRAGDDAADSSDPADPPRHGVRAGGVHVXRQDVRHGPSAGPXPL 583
Score = 113 bits (242), Expect(2) = 2e-031
Identities = 56/102 (54%), Positives = 66/102 (64%)
Frame = +2 / +1
Query: 95 VTGAPRPLQWRLRSTLCTIPCMGMLAN*LTRSRKVPYLLKVLRLRYGRSLKFSLKKCLER 274
+ GAP L WR RST CT PCM ML +*L RSRKV LLK RL+ GRSL+ +K L R
Sbjct: 67 IRGAPTRLPWRSRSTSCTTPCMVMLLS*LMRSRKVLPLLKAWRLKCGRSLRS*TRKSLAR 246
Query: 275 WARPLSPTCQSSHRRNLQRLTVSSLGFRQGSE*WQLR*RRSS 400
W PTC+ S R+ +R T S G R+GS *W+ R*RRSS
Sbjct: 247 WVPHPRPTCR*SPLRSWRRPTASCSGSRRGSA*WRRR*RRSS 372
Score = 98.2 bits (208), Expect(2) = 7e-025
Identities = 52/98 (53%), Positives = 59/98 (60%)
Frame = -1 / -3
Query: 433 GSAPSRAHRWHRRTPSSELPSFRTLSETQRGYRQPLQVPAV**LARRA*GARPSFQALLQ 254
GSAPS A RRTPSS PS RT S T+ G R+P P ARR+ PS Q L +
Sbjct: 405 GSAPSTARPSRRRTPSSAPPSCRTSSGTRTGRRRPPPAPEGRSPARRSWVGHPSCQGLPR 226
Query: 253 REFQGPAIS*PQHLQQIRHLS*SRQLVCQHAHTWNSTQ 140
QGPA *P LQQ +HLS*S QL QH HTW+ST+
Sbjct: 225 SGSQGPATL*PPRLQQRKHLS*SHQLA*QHDHTWSSTR 112
Score = 95.5 bits (202), Expect(2) = 5e-077
Identities = 41/57 (71%), Positives = 42/57 (73%)
Frame = -3 / -2
Query: 677 KACSSSTSLGHLDPSAANVPAP*GLPPWTWSMPNSLAPKV*PTGTNTMPWCVSWVIA 507
KAC SS S GHL+PS ANVPA *G P TWSM N LA V PTGTNTMPW VSWV A
Sbjct: 649 KACPSSISEGHLEPSPANVPAR*GXRPCTWSMSNILAXNVYPTGTNTMPWWVSWVTA 479
Score = 44.6 bits (91), Expect(2) = 2e-031
Identities = 14/20 (70%), Positives = 14/20 (70%)
Frame = +2 / +1
Query: 527 TTAWCLCPWATPSAPSCSAW 586
TTAWC C W T SAP CS W
Sbjct: 499 TTAWCSCRWGTRSAPRCSTW 558
Score = 35.9 bits (72), Expect(2) = 7e-025
Identities = 12/35 (34%), Positives = 15/35 (42%)
Frame = -1 / -3
Query: 577 TAWRRRCSPRAQTPCRXXXXXXXXXXXXXXGHHPG 473
T+WR C+P A+TPCR PG
Sbjct: 549 TSWRXTCTPPARTPCRGGSAGSLLSAASSPARRPG 445
>gb|BF257828.2|BF257828 HVSMEf0013P18f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEf0013P18f, mRNA sequence
Length = 850
Score = 383 bits (831), Expect(2) = e-107
Identities = 156/193 (80%), Positives = 167/193 (86%)
Frame = +1 / +1
Query: 145 YYSMYGHVGKLADEIKKGALSVEGVEAKIWQVPEILSEEVLGKMGAPPKPDVPVITPQEL 324
YYSMYGHV KLADEIKKG SVEGVEAKIWQVPE L EEVLGKMGAPPK D P+ITPQEL
Sbjct: 217 YYSMYGHVAKLADEIKKGVSSVEGVEAKIWQVPETLPEEVLGKMGAPPKLDAPIITPQEL 396
Query: 325 AEADGILFGFPTRFGMMAAQMKAFFDATGGLWREQSLAGKPAGMFFSXXXXXXXXXXXPL 504
A+ADGILFGFPTRFGMMAAQMKAFFDATGGLWREQSLAGKPAG+FFS L
Sbjct: 397 ADADGILFGFPTRFGMMAAQMKAFFDATGGLWREQSLAGKPAGIFFSTGTQGGGQETTAL 576
Query: 505 TAITQLTHHGMVFVPVGYTFGAKLFGMDQVQGGSPYGAGTFAADGSRWPSEVELEHAFHQ 684
T +TQLTHHGMVFVPVGYTFGAKLF MD+VQ GSPYGAGT+AADGS+WPSE+EL HA HQ
Sbjct: 577 TTVTQLTHHGMVFVPVGYTFGAKLFDMDKVQVGSPYGAGTYAADGSKWPSEMELGHALHQ 756
Query: 685 GKYFAGIAKKLKG 723
G+YFAG ++LKG
Sbjct: 757 GQYFAGTPEELKG 795
Score = 216 bits (467), Expect(3) = 2e-082
Identities = 92/108 (85%), Positives = 96/108 (88%)
Frame = -3 / -3
Query: 464 LKNMPAGLPARLCSLQSPPVASKNAFI*AAIIPNLVGNPKRIPSASASSCGVMTGTSGLG 285
LK +PAGLPARLCSL PPVASKNAFI AAI+PNLVG PKRIPSASASSCGVM G S LG
Sbjct: 536 LKKIPAGLPARLCSLHRPPVASKNAFICAAIMPNLVGKPKRIPSASASSCGVMIGASSLG 357
Query: 284 GAPIFPSTSSERISGTCHILASTPSTDKAPFLISSASLPTCPYME*YT 141
GAPIFPSTSS R+SGTCHILASTPSTD PFLISSASL TCPYME*Y+
Sbjct: 356 GAPIFPSTSSGRVSGTCHILASTPSTDDTPFLISSASLATCPYME*YS 213
Score = 202 bits (435), Expect(3) = 4e-054
Identities = 88/156 (56%), Positives = 104/156 (66%)
Frame = +3 / +3
Query: 144 VLFHVWACWQTS*RDQERCLIC*RC*G*DMAGP*NSL*RSAWKDGRAP*ARRASHHTAGT 323
VL HVW C TS* DQER +I *RC *+MAGP*NS S WKDG A *A +HHT T
Sbjct: 216 VLLHVWTCR*TS**DQERRVIS*RCRS*NMAGP*NSPGGSTWKDGCAS*A*CPNHHTTRT 395
Query: 324 CRG*RYPLWVSDKVRNDGSSDEGVLRCHRWALEGAEPRWQACRHVLQHWNPGWWPRDYTA 503
C PLW S KV +DG ++EG+L C+RW +EGAE QAC ++LQHW GWW DY+
Sbjct: 396 CGRRWDPLWFSYKVWHDGCANEGIL*CNRWPVEGAESCRQACGYLLQHWYSGWWAGDYSI 575
Query: 504 DGDYPADAPRHGVCARGLHLRRQAVRHGPGPGWQPL 611
D D+PRHG +R +HLR QAVRHG GWQP+
Sbjct: 576 DNSNSVDSPRHGFRSRRVHLRCQAVRHGQSSGWQPV 683
Score = 188 bits (404), Expect(2) = 4e-050
Identities = 84/151 (55%), Positives = 101/151 (66%)
Frame = -2 / -2
Query: 597 LDLVHAEQLXXXXXXXXXXXXXXVRQLGNRRQRCSLLATTLGSSAEEHAGRLASEALLPP 418
L+ VH EQL V QL Q CSLL TTL +SAEE RLA + LLPP
Sbjct: 669 LNFVHVEQLGTEGVPDGNENHAVVSQLSYCCQCCSLLPTTLSTSAEEDTRRLACKTLLPP 490
Query: 417 EPTGGIEERLHLSCHHSEPCRKPKEDTVSLCKFLRCDDWHVGLRGRAHLSKHFFRENFRD 238
+ TG I+E LHL HH++PCRK KED + + KFL CDDW + LR R HLSK+F RE+FRD
Sbjct: 489 QATGCIKECLHLRSHHAKPCRKTKEDPICVRKFLWCDDWGIKLRRRTHLSKYFLRESFRD 310
Query: 237 LPYLSLNTFNR*GTFLDLVS*FANMPIHGIV 145
LPY S +TFN * FLDL+S*F++M IHG+V
Sbjct: 309 LPYFSFDTFN**HAFLDLIS*FSDMSIHGVV 217
Score = 109 bits (233), Expect(2) = 2e-028
Identities = 56/96 (58%), Positives = 63/96 (65%)
Frame = -1 / -1
Query: 430 SAPSRAHRWHRRTPSSELPSFRTLSETQRGYRQPLQVPAV**LARRA*GARPSFQALLQR 251
SAPS HR H+R PS PS +TL E QRG QV V**L +A* A PSFQ L
Sbjct: 502 SAPSTGHRLHQRMPSFAQPSCQTL*ENQRGSHLRPQVLVV**LGHQA*EAHPSFQVLPPG 323
Query: 250 EFQGPAIS*PQHLQQIRHLS*SRQLVCQHAHTWNST 143
EFQGPAI * +HLQ + LS*S QLV +H HTW+ST
Sbjct: 322 EFQGPAIF*LRHLQLMTRLS*SHQLV*RHVHTWSST 215
Score = 106 bits (226), Expect(3) = 2e-082
Identities = 47/68 (69%), Positives = 51/68 (75%)
Frame = -3 / -3
Query: 722 PLSFLAMPAKYFPWWKACSSSTSLGHLDPSAANVPAP*GLPPWTWSMPNSLAPKV*PTGT 543
PLS +PAKY PW +AC SS S GHL+PSAA VPAP GLP T SM NSLAPKV PTGT
Sbjct: 794 PLSSSGVPAKY*PW*RACPSSISDGHLEPSAAYVPAPYGLPT*TLSMSNSLAPKVYPTGT 615
Query: 542 NTMPWCVS 519
TMPW V+
Sbjct: 614 KTMPW*VN 591
Score = 102 bits (218), Expect(2) = 2e-026
Identities = 51/89 (57%), Positives = 58/89 (65%)
Frame = +2 / +2
Query: 146 TIPCMGMLAN*LTRSRKVPYLLKVLRLRYGRSLKFSLKKCLERWARPLSPTCQSSHRRNL 325
T PCM M N*L RSRK + LKV +L+YGRSLK S +K LERW R LS QSSH +NL
Sbjct: 218 TTPCMDMSLN*LMRSRKACHQLKVSKLKYGRSLKLSRRKYLERWVRLLSLMPQSSHHKNL 397
Query: 326 QRLTVSSLGFRQGSE*WQLR*RRSSMPPV 412
+ SSL F QG *W +*R S M PV
Sbjct: 398 RTQMGSSLVFLQGLA*WLRK*RHSLMQPV 484
Score = 36.8 bits (74), Expect(2) = 2e-026
Identities = 13/20 (65%), Positives = 13/20 (65%)
Frame = +2 / +2
Query: 527 TTAWCLCPWATPSAPSCSAW 586
TTAW P TPS PSCS W
Sbjct: 599 TTAWFSFPSGTPSVPSCSTW 658
Score = 36.3 bits (73), Expect(2) = 2e-028
Identities = 13/36 (36%), Positives = 16/36 (44%)
Frame = -1 / -1
Query: 577 TAWRRRCSPRAQTPCRXXXXXXXXXXXXXXGHHPGF 470
TAW RRC+ R + PCR HHP +
Sbjct: 649 TAWHRRCTRRERKPCRGESTELLLSML*SPAHHPEY 542
Score = 30.9 bits (61), Expect(2) = 4e-050
Identities = 13/25 (52%), Positives = 16/25 (64%)
Frame = -2 / -2
Query: 720 LELLGDAREVFPLVEGVLQLHLARP 646
LE ARE+ LV+G+ QLHL P
Sbjct: 792 LEFFRSAREILTLVKGMSQLHLRWP 718
Score = 28.1 bits (55), Expect(2) = e-107
Identities = 12/19 (63%), Positives = 13/19 (68%)
Frame = +1 / +2
Query: 103 SSETSPMAVKIYVVYYSMY 159
S SPMAVK+YVV S Y
Sbjct: 17 SEAASPMAVKVYVVSGSTY 73
Score = 27.2 bits (53), Expect(3) = 2e-082
Identities = 9/16 (56%), Positives = 12/16 (75%)
Frame = -2 / -1
Query: 162 PIHGIVHNVDLNRHWR 115
PI H++DL+RHWR
Sbjct: 76 PICRSRHDIDLDRHWR 29
Score = 25.8 bits (50), Expect(3) = 4e-054
Identities = 8/13 (61%), Positives = 8/13 (61%)
Frame = +2 / +2
Query: 647 GRARWSWSTPSTR 685
G RWSW P TR
Sbjct: 719 GHLRWSWDMPFTR 757
Score = 22.6 bits (43), Expect(3) = 4e-054
Identities = 7/14 (50%), Positives = 8/14 (57%)
Frame = +3 / +3
Query: 681 PGEILRGHRQEAQG 722
PG + RGH QG
Sbjct: 753 PGSVFRGHSGRTQG 794
>gb|BU983853.1|BU983853 HA31D22r HA Hordeum vulgare subsp. vulgare cDNA clone HA31D22
5-PRIME, mRNA sequence
Length = 574
Score = 363 bits (787), Expect = e-100
Identities = 151/184 (82%), Positives = 157/184 (85%)
Frame = +1 / +2
Query: 91 SGHRSSETSPMAVKIYVVYYSMYGHVGKLADEIKKGALSVEGVEAKIWQVPEILSEEVLG 270
S S SPMAVK+YVVYYSMYGHV KLADEIKKG SVEGVEAKIWQVPE L EEVLG
Sbjct: 23 SPRSSEAASPMAVKVYVVYYSMYGHVAKLADEIKKGVSSVEGVEAKIWQVPETLPEEVLG 202
Query: 271 KMGAPPKPDVPVITPQELAEADGILFGFPTRFGMMAAQMKAFFDATGGLWREQSLAGKPA 450
KMGAPPK D P+ITPQELA+ADGILFGFPTRFGMMAAQMKAFFDATGGLWREQSLAGKPA
Sbjct: 203 KMGAPPKLDAPIITPQELADADGILFGFPTRFGMMAAQMKAFFDATGGLWREQSLAGKPA 382
Query: 451 GMFFSXXXXXXXXXXXPLTAITQLTHHGMVFVPVGYTFGAKLFGMDQVQGGSPYGAGTFA 630
G+FFS LT +TQLTHHGMVFVPVGYTFGAKLF MD+VQGGSPYGAGTFA
Sbjct: 383 GIFFSTGTQGGGQETTALTTVTQLTHHGMVFVPVGYTFGAKLFDMDKVQGGSPYGAGTFA 562
Query: 631 ADGS 642
ADGS
Sbjct: 563 ADGS 574
Score = 233 bits (503), Expect(2) = 5e-077
Identities = 101/122 (82%), Positives = 106/122 (86%)
Frame = -3 / -2
Query: 464 LKNMPAGLPARLCSLQSPPVASKNAFI*AAIIPNLVGNPKRIPSASASSCGVMTGTSGLG 285
LK +PAGLPARLCSL PPVASKNAFI AAI+PNLVG PKRIPSASASSCGVM G S LG
Sbjct: 396 LKKIPAGLPARLCSLHRPPVASKNAFICAAIMPNLVGKPKRIPSASASSCGVMIGASSLG 217
Query: 284 GAPIFPSTSSERISGTCHILASTPSTDKAPFLISSASLPTCPYME*YTT*ILTAIGEVSE 105
GAPIFPSTSS R+SGTCHILASTPSTD PFLISSASL TCPYME*YTT* LTAIG+ +
Sbjct: 216 GAPIFPSTSSGRVSGTCHILASTPSTDDTPFLISSASLATCPYME*YTT*TLTAIGDAAS 37
Query: 104 LL 99
L
Sbjct: 36 EL 31
Score = 214 bits (461), Expect = 8e-055
Identities = 92/162 (56%), Positives = 112/162 (69%)
Frame = -2 / -1
Query: 600 TLDLVHAEQLXXXXXXXXXXXXXXVRQLGNRRQRCSLLATTLGSSAEEHAGRLASEALLP 421
TL+ VH EQL V QL Q CSLL TTL +SAEE RLA + LLP
Sbjct: 532 TLNFVHVEQLGTEGVPDGNENHAVVSQLSYCCQCCSLLPTTLSTSAEEDTRRLACKTLLP 353
Query: 420 PEPTGGIEERLHLSCHHSEPCRKPKEDTVSLCKFLRCDDWHVGLRGRAHLSKHFFRENFR 241
P+ TG I+E LHL HH++PCRK KED + + KFL CDDW + LR R HLSK+F RE+FR
Sbjct: 352 PQATGCIKECLHLRSHHAKPCRKTKEDPICVRKFLWCDDWGIKLRRRTHLSKYFLRESFR 173
Query: 240 DLPYLSLNTFNR*GTFLDLVS*FANMPIHGIVHNVDLNRHWR 115
DLPY S +TFN * FLDL+S*F++M IHG+VH++DL+RHWR
Sbjct: 172 DLPYFSFDTFN**HAFLDLIS*FSDMSIHGVVHDIDLDRHWR 47
Score = 210 bits (453), Expect = 1e-053
Identities = 95/177 (53%), Positives = 113/177 (63%)
Frame = +3 / +1
Query: 81 PSLVWSQELRDLSNGG*DLRCVLFHVWACWQTS*RDQERCLIC*RC*G*DMAGP*NSL*R 260
P L + +SNGG L VL HVW C TS* DQER +I *RC *+MAGP*NS
Sbjct: 13 PDLQPEELRSSISNGGQGLCRVLLHVWTCR*TS**DQERRVIS*RCRS*NMAGP*NSPGG 192
Query: 261 SAWKDGRAP*ARRASHHTAGTCRG*RYPLWVSDKVRNDGSSDEGVLRCHRWALEGAEPRW 440
S WKDG A *A +HHT TC PLW S KV +DG ++EG+L C+RW +EGAE
Sbjct: 193 STWKDGCAS*A*CPNHHTTRTCGRRWDPLWFSYKVWHDGCANEGIL*CNRWPVEGAESCR 372
Query: 441 QACRHVLQHWNPGWWPRDYTADGDYPADAPRHGVCARGLHLRRQAVRHGPGPGWQPL 611
QAC ++LQHW GWW DY+ D D+PRHG +R +HLR QAVRHG GWQP+
Sbjct: 373 QACGYLLQHWYSGWWAGDYSIDNSNSVDSPRHGFRSRRVHLRCQAVRHGQSSGWQPV 543
Score = 120 bits (256), Expect(2) = 1e-031
Identities = 58/99 (58%), Positives = 65/99 (65%)
Frame = +2 / +3
Query: 116 LQWRLRSTLCTIPCMGMLAN*LTRSRKVPYLLKVLRLRYGRSLKFSLKKCLERWARPLSP 295
LQWR RS CT PCM M N*L RSRK + LKV +L+YGRSLK S +K LERW R LS
Sbjct: 48 LQWRSRSMSCTTPCMDMSLN*LMRSRKACHQLKVSKLKYGRSLKLSRRKYLERWVRLLSL 227
Query: 296 TCQSSHRRNLQRLTVSSLGFRQGSE*WQLR*RRSSMPPV 412
QSSH +NL+ SSL F QG *W +*R S M PV
Sbjct: 228 MPQSSHHKNLRTQMGSSLVFLQGLA*WLRK*RHSLMQPV 344
Score = 110 bits (234), Expect(2) = 2e-028
Identities = 56/97 (57%), Positives = 64/97 (65%)
Frame = -1 / -3
Query: 430 SAPSRAHRWHRRTPSSELPSFRTLSETQRGYRQPLQVPAV**LARRA*GARPSFQALLQR 251
SAPS HR H+R PS PS +TL E QRG QV V**L +A* A PSFQ L
Sbjct: 362 SAPSTGHRLHQRMPSFAQPSCQTL*ENQRGSHLRPQVLVV**LGHQA*EAHPSFQVLPPG 183
Query: 250 EFQGPAIS*PQHLQQIRHLS*SRQLVCQHAHTWNSTQ 140
EFQGPAI * +HLQ + LS*S QLV +H HTW+ST+
Sbjct: 182 EFQGPAIF*LRHLQLMTRLS*SHQLV*RHVHTWSSTR 72
Score = 75.3 bits (158), Expect(2) = 5e-077
Identities = 32/41 (78%), Positives = 34/41 (82%)
Frame = -3 / -2
Query: 641 DPSAANVPAP*GLPPWTWSMPNSLAPKV*PTGTNTMPWCVS 519
+PSAANVPAP GLPP T SM NSLAPKV PTGT TMPW V+
Sbjct: 573 EPSAANVPAPYGLPP*TLSMSNSLAPKVYPTGTKTMPW*VN 451
Score = 36.8 bits (74), Expect(2) = 1e-031
Identities = 13/20 (65%), Positives = 13/20 (65%)
Frame = +2 / +3
Query: 527 TTAWCLCPWATPSAPSCSAW 586
TTAW P TPS PSCS W
Sbjct: 459 TTAWFSFPSGTPSVPSCSTW 518
Score = 36.3 bits (73), Expect(2) = 2e-028
Identities = 13/36 (36%), Positives = 16/36 (44%)
Frame = -1 / -3
Query: 577 TAWRRRCSPRAQTPCRXXXXXXXXXXXXXXGHHPGF 470
TAW RRC+ R + PCR HHP +
Sbjct: 509 TAWHRRCTRRERKPCRGESTELLLSML*SPAHHPEY 402
>gb|BI960304.1|BI960304 HVSMEn0024C15f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0024C15f, mRNA sequence
Length = 636
Score = 342 bits (741), Expect(2) = 6e-099
Identities = 140/173 (80%), Positives = 149/173 (86%)
Frame = +1 / +3
Query: 91 SGHRSSETSPMAVKIYVVYYSMYGHVGKLADEIKKGALSVEGVEAKIWQVPEILSEEVLG 270
S RSS PMAVK+YVVYYSMYGHV KLADEIKKGA SVEGVE K+WQVPEIL+EEVLG
Sbjct: 78 SDPRSSHAPPMAVKVYVVYYSMYGHVAKLADEIKKGASSVEGVEVKVWQVPEILNEEVLG 257
Query: 271 KMGAPPKPDVPVITPQELAEADGILFGFPTRFGMMAAQMKAFFDATGGLWREQSLAGKPA 450
KMGAPPK DVPVI+P ELAEADG+LFGFPTRFGMMAAQMKAFFDATGGLWREQSLAGKPA
Sbjct: 258 KMGAPPKTDVPVISPHELAEADGVLFGFPTRFGMMAAQMKAFFDATGGLWREQSLAGKPA 437
Query: 451 GMFFSXXXXXXXXXXXPLTAITQLTHHGMVFVPVGYTFGAKLFGMDQVQGGSP 609
G+FF PLTA+TQLTHHGMVFVPVGYTFGAK+F MD+VQGG P
Sbjct: 438 GVFFITGTQGGGQETTPLTAVTQLTHHGMVFVPVGYTFGAKMFNMDKVQGGQP 596
Score = 211 bits (455), Expect(3) = 5e-070
Identities = 96/121 (79%), Positives = 101/121 (83%)
Frame = -3 / -3
Query: 464 LKNMPAGLPARLCSLQSPPVASKNAFI*AAIIPNLVGNPKRIPSASASSCGVMTGTSGLG 285
+KN PAGLPARLCSL SPPVASKNAFI AAI+PNLVGNP R PSASASS G +TGTS LG
Sbjct: 451 MKNTPAGLPARLCSLHSPPVASKNAFICAAIMPNLVGNPNRTPSASASS*GEITGTSVLG 272
Query: 284 GAPIFPSTSSERISGTCHILASTPSTDKAPFLISSASLPTCPYME*YTT*ILTAIGEVSE 105
GAPI P TSS RISGTCH L STPST+ APFLISSASL T PYME*YTT* LTA+G E
Sbjct: 271 GAPILPRTSSFRISGTCHTLTSTPSTEDAPFLISSASLAT*PYME*YTT*TLTAMGGAWE 92
Query: 104 L 102
L
Sbjct: 91 L 89
Score = 179 bits (385), Expect = 2e-044
Identities = 77/141 (54%), Positives = 100/141 (70%)
Frame = -2 / -2
Query: 522 QLGNRRQRCSLLATTLGSSAEEHAGRLASEALLPPEPTGGIEERLHLSCHHSEPCRKPKE 343
QLG+ QR LL LG+ EEHA RLA +ALLPP+P +EERLHL HH+EP R+P++
Sbjct: 509 QLGHCCQRRRLLPAALGARDEEHARRLAGQALLPPQPARRVEERLHLRRHHAEPRREPEQ 330
Query: 342 DTVSLCKFLRCDDWHVGLRGRAHLSKHFFRENFRDLPYLSLNTFNR*GTFLDLVS*FANM 163
D V L + +R D HVGL HL+K F ++ RDLP+ +L+ FNR FLDL+S* +NM
Sbjct: 329 DAVGLRQLMRGDHRHVGLGWGTHLAKDFLVQDLRDLPHFNLHAFNRGRPFLDLIS*LSNM 150
Query: 162 PIHGIVHNVDLNRHWRGLGAP 100
IHG+VH+VDL+RH R +GAP
Sbjct: 149 TIHGVVHDVDLDRHGRCVGAP 87
Score = 159 bits (341), Expect = 3e-038
Identities = 84/164 (51%), Positives = 101/164 (61%)
Frame = +3 / +2
Query: 96 SQELRDLSNGG*DLRCVLFHVWACWQTS*RDQERCLIC*RC*G*DMAGP*NSL*RSAWKD 275
S EL S+GG LR VL HVW+C S* DQER ++C*R G* +AGP*+ S W+D
Sbjct: 83 SAELPRTSHGGQGLRRVLLHVWSCC*AS**DQERGVLC*RRGG*SVAGP*DPERGSPWQD 262
Query: 276 GRAP*ARRASHHTAGTCRG*RYPLWVSDKVRNDGSSDEGVLRCHRWALEGAEPRWQACRH 455
G RRA + G R P+ V D+VR+DG +DEGVLR A+EGAEP QA
Sbjct: 263 GCPTQDRRAGDLPS*AGGGRRRPVRVPDEVRHDGGADEGVLRRDGRAVEGAEPGRQAGGR 442
Query: 456 VLQHWNPGWWPRDYTADGDYPADAPRHGVCARGLHLRRQAVRHG 587
VL H +PG D AD PAD PRHGV A G+H+RRQ V+HG
Sbjct: 443 VLHHGHPGRRAGDDAADSSDPADPPRHGVRAGGVHVRRQDVQHG 574
Score = 108 bits (230), Expect(2) = 9e-030
Identities = 54/102 (52%), Positives = 64/102 (62%)
Frame = +2 / +1
Query: 95 VTGAPRPLQWRLRSTLCTIPCMGMLAN*LTRSRKVPYLLKVLRLRYGRSLKFSLKKCLER 274
+ GAP L WR RST CT PCM ML +*L RSRK LLK RL+ GRSL+ +K L R
Sbjct: 82 IRGAPTHLPWRSRSTSCTTPCMVMLLS*LMRSRKGRPLLKAWRLKCGRSLRS*TRKSLAR 261
Query: 275 WARPLSPTCQSSHRRNLQRLTVSSLGFRQGSE*WQLR*RRSS 400
W PTC+ S + +R T S G R+GS *W+ R*RRSS
Sbjct: 262 WVPHPRPTCR*SPLMSWRRPTASCSGSRRGSA*WRRR*RRSS 387
Score = 60.6 bits (126), Expect(3) = 5e-070
Identities = 25/34 (73%), Positives = 25/34 (73%)
Frame = -3 / -3
Query: 608 GLPPWTWSMPNSLAPKV*PTGTNTMPWCVSWVIA 507
G PP T SM N LAP V PTGTNTMPW VSWV A
Sbjct: 595 GCPPCTLSMLNILAPNVYPTGTNTMPWWVSWVTA 494
Score = 56.5 bits (117), Expect(3) = 3e-021
Identities = 29/54 (53%), Positives = 33/54 (61%)
Frame = -1 / -1
Query: 301 ARRA*GARPSFQALLQREFQGPAIS*PQHLQQIRHLS*SRQLVCQHAHTWNSTQ 140
ARR+ PS Q L + QGPA *P LQQ LS*S QL QH HTW+ST+
Sbjct: 288 ARRSWVGHPSCQGLPRSGSQGPATL*PPRLQQRTPLS*SHQLA*QHDHTWSSTR 127
Score = 44.6 bits (91), Expect(2) = 9e-030
Identities = 14/20 (70%), Positives = 14/20 (70%)
Frame = +2 / +1
Query: 527 TTAWCLCPWATPSAPSCSAW 586
TTAWC C W T SAP CS W
Sbjct: 514 TTAWCSCRWGTRSAPRCSTW 573
Score = 44.1 bits (90), Expect(3) = 3e-021
Identities = 21/35 (60%), Positives = 23/35 (65%)
Frame = -1 / -1
Query: 433 GSAPSRAHRWHRRTPSSELPSFRTLSETQRGYRQP 329
GSAPS A RRTPSS PS RT S T+ G R+P
Sbjct: 420 GSAPSTARPSRRRTPSSAPPSCRTSSGTRTGRRRP 316
Score = 39.6 bits (80), Expect(2) = 6e-099
Identities = 14/18 (77%), Positives = 15/18 (83%)
Frame = +1 / +1
Query: 595 QGGSPYGAGTFAADGSRW 648
+ GSPY AGTFA DGSRW
Sbjct: 583 KAGSPYRAGTFAGDGSRW 636
Score = 38.6 bits (78), Expect(3) = 3e-021
Identities = 13/35 (37%), Positives = 16/35 (45%)
Frame = -1 / -1
Query: 577 TAWRRRCSPRAQTPCRXXXXXXXXXXXXXXGHHPG 473
T+WRR C+P A+TPCR PG
Sbjct: 564 TSWRRTCTPPARTPCRGGSAGSLLSAASSPARRPG 460
Score = 32.2 bits (64), Expect(3) = 5e-070
Identities = 13/16 (81%), Positives = 13/16 (81%)
Frame = -3 / -2
Query: 647 HLDPSAANVPAP*GLP 600
HLDPS ANVPA GLP
Sbjct: 635 HLDPSPANVPARYGLP 588
>gb|BI951506.1|BI951506 HVSMEm0001C21f Hordeum vulgare green seedling EST library
HVcDNA0014 (Blumeria infected) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEm0001C21f, mRNA sequence
Length = 849
Score = 353 bits (765), Expect = 9e-097
Identities = 145/183 (79%), Positives = 156/183 (85%)
Frame = +1 / +1
Query: 91 SGHRSSETSPMAVKIYVVYYSMYGHVGKLADEIKKGALSVEGVEAKIWQVPEILSEEVLG 270
S RSS PMAVK+YVVYYSMYGHV KLADEIKKGA SVEGVE K+WQVPEIL+EEVLG
Sbjct: 70 SDPRSSHAPPMAVKVYVVYYSMYGHVAKLADEIKKGASSVEGVEVKVWQVPEILNEEVLG 249
Query: 271 KMGAPPKPDVPVITPQELAEADGILFGFPTRFGMMAAQMKAFFDATGGLWREQSLAGKPA 450
KMGAPPK DVPVI+PQELAEADG+LFGFPTRFGMMAAQMKAFFDATGGLWREQSLAGKPA
Sbjct: 250 KMGAPPKTDVPVISPQELAEADGVLFGFPTRFGMMAAQMKAFFDATGGLWREQSLAGKPA 429
Query: 451 GMFFSXXXXXXXXXXXPLTAITQLTHHGMVFVPVGYTFGAKLFGMDQVQGGSPYGAGTFA 630
G+FFS PLTA+TQLTHHGMVFVPVGYTFGA++F MD+VQGGSP G F+
Sbjct: 430 GVFFSTGTQGGGQETTPLTAVTQLTHHGMVFVPVGYTFGAQMFDMDKVQGGSPSGPARFS 609
Query: 631 ADG 639
G
Sbjct: 610 GTG 618
Score = 213 bits (459), Expect(3) = 4e-069
Identities = 97/121 (80%), Positives = 102/121 (84%)
Frame = -3 / -2
Query: 464 LKNMPAGLPARLCSLQSPPVASKNAFI*AAIIPNLVGNPKRIPSASASSCGVMTGTSGLG 285
LKN PAGLPARLCSL SPPVASKNAFI AAI+PNLVGNP R PSASASS G +TGTS LG
Sbjct: 443 LKNTPAGLPARLCSLHSPPVASKNAFICAAIMPNLVGNPNRTPSASASS*GEITGTSVLG 264
Query: 284 GAPIFPSTSSERISGTCHILASTPSTDKAPFLISSASLPTCPYME*YTT*ILTAIGEVSE 105
GAPI P TSS RISGTCH L STPST++APFLISSASL T PYME*YTT* LTA+G E
Sbjct: 263 GAPILPRTSSFRISGTCHTLTSTPSTEEAPFLISSASLAT*PYME*YTT*TLTAMGGAWE 84
Query: 104 L 102
L
Sbjct: 83 L 81
Score = 187 bits (402), Expect = 1e-046
Identities = 80/141 (56%), Positives = 102/141 (72%)
Frame = -2 / -1
Query: 522 QLGNRRQRCSLLATTLGSSAEEHAGRLASEALLPPEPTGGIEERLHLSCHHSEPCRKPKE 343
QLG+ QR LL LG+ AEEHA RLA +ALLPP+P +EERLHL HH+EP R+P++
Sbjct: 501 QLGHCCQRRRLLPAALGARAEEHARRLAGQALLPPQPARRVEERLHLRRHHAEPRREPEQ 322
Query: 342 DTVSLCKFLRCDDWHVGLRGRAHLSKHFFRENFRDLPYLSLNTFNR*GTFLDLVS*FANM 163
D V L + LR D HVGL HL+K F ++ RDLP+ +L+ FNR TFLDL+S* +NM
Sbjct: 321 DAVGLRQLLRGDHRHVGLGWGTHLAKDFLVQDLRDLPHFNLHAFNRGSTFLDLIS*LSNM 142
Query: 162 PIHGIVHNVDLNRHWRGLGAP 100
IHG+VH+VDL+RH R +GAP
Sbjct: 141 TIHGVVHDVDLDRHGRRVGAP 79
Score = 172 bits (371), Expect(2) = 2e-044
Identities = 89/172 (51%), Positives = 105/172 (61%)
Frame = +3 / +3
Query: 96 SQELRDLSNGG*DLRCVLFHVWACWQTS*RDQERCLIC*RC*G*DMAGP*NSL*RSAWKD 275
S EL S+GG LR VL HVW+C S* DQERC +C*R G* +AGP*+ S W+D
Sbjct: 75 SAELPRASHGGQGLRRVLLHVWSCC*AS**DQERCFLC*RRGG*SVAGP*DPERGSPWQD 254
Query: 276 GRAP*ARRASHHTAGTCRG*RYPLWVSDKVRNDGSSDEGVLRCHRWALEGAEPRWQACRH 455
G RRA +G G R P+ V D+VR+DG +DEGVLR A+EGAEP QA
Sbjct: 255 GCPTQDRRAGDLPSGAGGGRRRPVRVPDEVRHDGGADEGVLRRDGRAVEGAEPGRQAGGR 434
Query: 456 VLQHWNPGWWPRDYTADGDYPADAPRHGVCARGLHLRRQAVRHGPGPGWQPL 611
VLQH +PG D AD PAD PRHGV A G+H+RR VRHG QP+
Sbjct: 435 VLQHGHPGRRAGDDAADSSDPADPPRHGVRAGGVHVRRPDVRHGQSARRQPV 590
Score = 113 bits (242), Expect(2) = 3e-031
Identities = 56/102 (54%), Positives = 66/102 (64%)
Frame = +2 / +2
Query: 95 VTGAPRPLQWRLRSTLCTIPCMGMLAN*LTRSRKVPYLLKVLRLRYGRSLKFSLKKCLER 274
+ GAP L WR RST CT PCM ML +*L RSRKV LLK RL+ GRSL+ +K L R
Sbjct: 74 IRGAPTRLPWRSRSTSCTTPCMVMLLS*LMRSRKVLPLLKAWRLKCGRSLRS*TRKSLAR 253
Query: 275 WARPLSPTCQSSHRRNLQRLTVSSLGFRQGSE*WQLR*RRSS 400
W PTC+ S R+ +R T S G R+GS *W+ R*RRSS
Sbjct: 254 WVPHPRPTCR*SPLRSWRRPTASCSGSRRGSA*WRRR*RRSS 379
Score = 98.2 bits (208), Expect(2) = 6e-024
Identities = 52/98 (53%), Positives = 59/98 (60%)
Frame = -1 / -3
Query: 433 GSAPSRAHRWHRRTPSSELPSFRTLSETQRGYRQPLQVPAV**LARRA*GARPSFQALLQ 254
GSAPS A RRTPSS PS RT S T+ G R+P P ARR+ PS Q L +
Sbjct: 412 GSAPSTARPSRRRTPSSAPPSCRTSSGTRTGRRRPPPAPEGRSPARRSWVGHPSCQGLPR 233
Query: 253 REFQGPAIS*PQHLQQIRHLS*SRQLVCQHAHTWNSTQ 140
QGPA *P LQQ +HLS*S QL QH HTW+ST+
Sbjct: 232 SGSQGPATL*PPRLQQRKHLS*SHQLA*QHDHTWSSTR 119
Score = 62.5 bits (130), Expect(3) = 4e-069
Identities = 26/36 (72%), Positives = 26/36 (72%)
Frame = -3 / -2
Query: 614 P*GLPPWTWSMPNSLAPKV*PTGTNTMPWCVSWVIA 507
P GLPP T SM N AP V PTGTNTMPW VSWV A
Sbjct: 593 PDGLPPCTLSMSNIWAPNVYPTGTNTMPWWVSWVTA 486
Score = 44.6 bits (91), Expect(2) = 3e-031
Identities = 14/20 (70%), Positives = 14/20 (70%)
Frame = +2 / +2
Query: 527 TTAWCLCPWATPSAPSCSAW 586
TTAWC C W T SAP CS W
Sbjct: 506 TTAWCSCRWGTRSAPRCSTW 565
Score = 32.7 bits (65), Expect(2) = 6e-024
Identities = 12/35 (34%), Positives = 15/35 (42%)
Frame = -1 / -3
Query: 577 TAWRRRCSPRAQTPCRXXXXXXXXXXXXXXGHHPG 473
T+ RR C+P A+TPCR PG
Sbjct: 556 TSGRRTCTPPARTPCRGGSAGSLLSAASSPARRPG 452
Score = 27.2 bits (53), Expect(2) = 2e-044
Identities = 10/13 (76%), Positives = 10/13 (76%)
Frame = +1 / +3
Query: 607 PYGAGTFAADGSR 645
P GAGTF DGSR
Sbjct: 585 PVGAGTFLGDGSR 623
Score = 25.4 bits (49), Expect(3) = 4e-069
Identities = 10/13 (76%), Positives = 10/13 (76%)
Frame = -3 / -3
Query: 644 LDPSAANVPAP*G 606
LDPS NVPAP G
Sbjct: 622 LDPSPRNVPAPTG 584
>gb|BG301108.1|BG301108 HVSMEb0019J09f Hordeum vulgare seedling shoot EST library
HVcDNA0002 (Dehydration stress) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEb0019J09f, mRNA sequence
Length = 580
Score = 341 bits (740), Expect = 3e-093
Identities = 141/172 (81%), Positives = 149/172 (86%)
Frame = +1 / +3
Query: 91 SGHRSSETSPMAVKIYVVYYSMYGHVGKLADEIKKGALSVEGVEAKIWQVPEILSEEVLG 270
S RSS PMAVK+YVVYYSMYGHV KLADEIKKGA SVEGVE K+WQVPEIL+EEVLG
Sbjct: 63 SDPRSSHAPPMAVKVYVVYYSMYGHVAKLADEIKKGASSVEGVEVKVWQVPEILNEEVLG 242
Query: 271 KMGAPPKPDVPVITPQELAEADGILFGFPTRFGMMAAQMKAFFDATGGLWREQSLAGKPA 450
KMGAPPK DVPVI+PQELAEADG+LFGFPTRFGMMAAQMKAFFDATGGLWREQSLAGKPA
Sbjct: 243 KMGAPPKTDVPVISPQELAEADGVLFGFPTRFGMMAAQMKAFFDATGGLWREQSLAGKPA 422
Query: 451 GMFFSXXXXXXXXXXXPLTAITQLTHHGMVFVPVGYTFGAKLFGMDQVQGGS 606
G+FFS PLTA+TQLTHHGM FVPVGYTFGAK+F MD VQGGS
Sbjct: 423 GVFFSTGTQGGGQETTPLTAVTQLTHHGMGFVPVGYTFGAKMFDMDNVQGGS 578
Score = 213 bits (459), Expect(2) = 7e-066
Identities = 97/121 (80%), Positives = 102/121 (84%)
Frame = -3 / -1
Query: 464 LKNMPAGLPARLCSLQSPPVASKNAFI*AAIIPNLVGNPKRIPSASASSCGVMTGTSGLG 285
LKN PAGLPARLCSL SPPVASKNAFI AAI+PNLVGNP R PSASASS G +TGTS LG
Sbjct: 436 LKNTPAGLPARLCSLHSPPVASKNAFICAAIMPNLVGNPNRTPSASASS*GEITGTSVLG 257
Query: 284 GAPIFPSTSSERISGTCHILASTPSTDKAPFLISSASLPTCPYME*YTT*ILTAIGEVSE 105
GAPI P TSS RISGTCH L STPST++APFLISSASL T PYME*YTT* LTA+G E
Sbjct: 256 GAPILPRTSSFRISGTCHTLTSTPSTEEAPFLISSASLAT*PYME*YTT*TLTAMGGAWE 77
Query: 104 L 102
L
Sbjct: 76 L 74
Score = 187 bits (402), Expect = 1e-046
Identities = 80/141 (56%), Positives = 102/141 (72%)
Frame = -2 / -3
Query: 522 QLGNRRQRCSLLATTLGSSAEEHAGRLASEALLPPEPTGGIEERLHLSCHHSEPCRKPKE 343
QLG+ QR LL LG+ AEEHA RLA +ALLPP+P +EERLHL HH+EP R+P++
Sbjct: 494 QLGHCCQRRRLLPAALGARAEEHARRLAGQALLPPQPARRVEERLHLRRHHAEPRREPEQ 315
Query: 342 DTVSLCKFLRCDDWHVGLRGRAHLSKHFFRENFRDLPYLSLNTFNR*GTFLDLVS*FANM 163
D V L + LR D HVGL HL+K F ++ RDLP+ +L+ FNR TFLDL+S* +NM
Sbjct: 314 DAVGLRQLLRGDHRHVGLGWGTHLAKDFLVQDLRDLPHFNLHAFNRGSTFLDLIS*LSNM 135
Query: 162 PIHGIVHNVDLNRHWRGLGAP 100
IHG+VH+VDL+RH R +GAP
Sbjct: 134 TIHGVVHDVDLDRHGRRVGAP 72
Score = 177 bits (381), Expect = 8e-044
Identities = 91/171 (53%), Positives = 106/171 (61%)
Frame = +3 / +2
Query: 96 SQELRDLSNGG*DLRCVLFHVWACWQTS*RDQERCLIC*RC*G*DMAGP*NSL*RSAWKD 275
S EL S+GG LR VL HVW+C S* DQERC +C*R G* +AGP*+ S W+D
Sbjct: 68 SAELPRASHGGQGLRRVLLHVWSCC*AS**DQERCFLC*RRGG*SVAGP*DPERGSPWQD 247
Query: 276 GRAP*ARRASHHTAGTCRG*RYPLWVSDKVRNDGSSDEGVLRCHRWALEGAEPRWQACRH 455
G RRA +G G R P+ V D+VR+DG +DEGVLR A+EGAEP QA
Sbjct: 248 GCPTQDRRAGDLPSGAGGGRRRPVRVPDEVRHDGGADEGVLRRDGRAVEGAEPGRQAGGR 427
Query: 456 VLQHWNPGWWPRDYTADGDYPADAPRHGVCARGLHLRRQAVRHGPGPGWQP 608
VLQH +PG D AD PAD PRHGV A G+H+RRQ VRHG G QP
Sbjct: 428 VLQHGHPGRRAGDDAADSSDPADPPRHGVRAGGVHVRRQDVRHGQCAGRQP 580
Score = 113 bits (242), Expect(2) = 9e-030
Identities = 56/102 (54%), Positives = 66/102 (64%)
Frame = +2 / +1
Query: 95 VTGAPRPLQWRLRSTLCTIPCMGMLAN*LTRSRKVPYLLKVLRLRYGRSLKFSLKKCLER 274
+ GAP L WR RST CT PCM ML +*L RSRKV LLK RL+ GRSL+ +K L R
Sbjct: 67 IRGAPTRLPWRSRSTSCTTPCMVMLLS*LMRSRKVLPLLKAWRLKCGRSLRS*TRKSLAR 246
Query: 275 WARPLSPTCQSSHRRNLQRLTVSSLGFRQGSE*WQLR*RRSS 400
W PTC+ S R+ +R T S G R+GS *W+ R*RRSS
Sbjct: 247 WVPHPRPTCR*SPLRSWRRPTASCSGSRRGSA*WRRR*RRSS 372
Score = 98.2 bits (208), Expect(2) = 1e-025
Identities = 52/98 (53%), Positives = 59/98 (60%)
Frame = -1 / -2
Query: 433 GSAPSRAHRWHRRTPSSELPSFRTLSETQRGYRQPLQVPAV**LARRA*GARPSFQALLQ 254
GSAPS A RRTPSS PS RT S T+ G R+P P ARR+ PS Q L +
Sbjct: 405 GSAPSTARPSRRRTPSSAPPSCRTSSGTRTGRRRPPPAPEGRSPARRSWVGHPSCQGLPR 226
Query: 253 REFQGPAIS*PQHLQQIRHLS*SRQLVCQHAHTWNSTQ 140
QGPA *P LQQ +HLS*S QL QH HTW+ST+
Sbjct: 225 SGSQGPATL*PPRLQQRKHLS*SHQLA*QHDHTWSSTR 112
Score = 58.3 bits (121), Expect(2) = 7e-066
Identities = 24/33 (72%), Positives = 24/33 (72%)
Frame = -3 / -1
Query: 605 LPPWTWSMPNSLAPKV*PTGTNTMPWCVSWVIA 507
LPP T SM N LAP V PTGTN MPW VSWV A
Sbjct: 577 LPPCTLSMSNILAPNVYPTGTNPMPWWVSWVTA 479
Score = 39.1 bits (79), Expect(2) = 9e-030
Identities = 13/20 (65%), Positives = 13/20 (65%)
Frame = +2 / +1
Query: 527 TTAWCLCPWATPSAPSCSAW 586
TTAW C W T SAP CS W
Sbjct: 499 TTAWGSCRWGTRSAPRCSTW 558
Score = 38.6 bits (78), Expect(2) = 1e-025
Identities = 13/35 (37%), Positives = 16/35 (45%)
Frame = -1 / -2
Query: 577 TAWRRRCSPRAQTPCRXXXXXXXXXXXXXXGHHPG 473
T+WRR C+P A+TPCR PG
Sbjct: 549 TSWRRTCTPPARTPCRGGSAGSLLSAASSPARRPG 445
>gb|BU985248.1|BU985248 HF06J04r HF Hordeum vulgare subsp. vulgare cDNA clone HF06J04
5-PRIME, mRNA sequence
Length = 557
Score = 341 bits (740), Expect = 3e-093
Identities = 140/166 (84%), Positives = 148/166 (89%)
Frame = +1 / +3
Query: 235 QVPEILSEEVLGKMGAPPKPDVPVITPQELAEADGILFGFPTRFGMMAAQMKAFFDATGG 414
+VPE L EEVLGKMGAPPK D P+ITPQELA+ADGILFGFPTRFGMMAAQMKAFFDATGG
Sbjct: 15 KVPETLPEEVLGKMGAPPKLDAPIITPQELADADGILFGFPTRFGMMAAQMKAFFDATGG 194
Query: 415 LWREQSLAGKPAGMFFSXXXXXXXXXXXPLTAITQLTHHGMVFVPVGYTFGAKLFGMDQV 594
LWREQSLAGKPAG+FFS LT +TQLTHHGMVFVPVGYTFGAKLF MD+V
Sbjct: 195 LWREQSLAGKPAGIFFSTGTQGGGQETTALTTVTQLTHHGMVFVPVGYTFGAKLFDMDKV 374
Query: 595 QGGSPYGAGTFAADGSRWPSEVELEHAFHQGKYFAGIAKKLKGSA* 732
QGGSPYGAGTFAADGSRWPSE+ELEHAFHQG+YFAGIAKKLKGSA*
Sbjct: 375 QGGSPYGAGTFAADGSRWPSEMELEHAFHQGQYFAGIAKKLKGSA* 512
Score = 192 bits (414), Expect = 2e-048
Identities = 90/167 (53%), Positives = 105/167 (62%)
Frame = -2 / -1
Query: 735 RSSRALELLGDAREVFPLVEGVLQLHLARPPRPXXXXXXXXXXXATLDLVHAEQLXXXXX 556
RSSR+LE L DARE+ LVEG+LQLHL PPR ATL+ VH EQL
Sbjct: 515 RSSRSLEFLRDAREILTLVEGMLQLHLRWPPRTIGGKCACAVRAATLNFVHVEQLGTEGV 336
Query: 555 XXXXXXXXXVRQLGNRRQRCSLLATTLGSSAEEHAGRLASEALLPPEPTGGIEERLHLSC 376
V QL Q CSLL TTL +SAEE RLA + LLPP+ TG I+E LHL
Sbjct: 335 PDGNENHAVVSQLSYCCQCCSLLPTTLSTSAEEDTRRLACKTLLPPQATGCIKECLHLRS 156
Query: 375 HHSEPCRKPKEDTVSLCKFLRCDDWHVGLRGRAHLSKHFFRENFRDL 235
HH++PCRK KED + + KFL CDDW + LR R HLSK+F RE+FRDL
Sbjct: 155 HHAKPCRKTKEDPICVRKFLWCDDWGIKLRRRTHLSKYFLRESFRDL 15
Score = 164 bits (353), Expect(2) = 3e-046
Identities = 68/127 (53%), Positives = 83/127 (65%)
Frame = +3 / +2
Query: 231 MAGP*NSL*RSAWKDGRAP*ARRASHHTAGTCRG*RYPLWVSDKVRNDGSSDEGVLRCHR 410
+ GP*NS S WKDG A *A +HHT TC PLW S KV +DG ++EG+L C+R
Sbjct: 11 LKGP*NSPGGSTWKDGCAS*A*CPNHHTTRTCGRRWDPLWFSYKVWHDGCANEGIL*CNR 190
Query: 411 WALEGAEPRWQACRHVLQHWNPGWWPRDYTADGDYPADAPRHGVCARGLHLRRQAVRHGP 590
W +EGAE QAC ++LQHW GWW DY+ D D+PRHG +R +HLR QAVRHG
Sbjct: 191 WPVEGAESCRQACGYLLQHWYSGWWAGDYSIDNSNSVDSPRHGFRSRRVHLRCQAVRHGQ 370
Query: 591 GPGWQPL 611
GWQP+
Sbjct: 371 SSGWQPV 391
Score = 149 bits (321), Expect(2) = 1e-070
Identities = 64/76 (84%), Positives = 67/76 (88%)
Frame = -3 / -2
Query: 464 LKNMPAGLPARLCSLQSPPVASKNAFI*AAIIPNLVGNPKRIPSASASSCGVMTGTSGLG 285
LK +PAGLPARLCSL PPVASKNAFI AAI+PNLVG PKRIPSASASSCGVM G S LG
Sbjct: 244 LKKIPAGLPARLCSLHRPPVASKNAFICAAIMPNLVGKPKRIPSASASSCGVMIGASSLG 65
Query: 284 GAPIFPSTSSERISGT 237
GAPIFPSTSS R+SGT
Sbjct: 64 GAPIFPSTSSGRVSGT 17
Score = 137 bits (294), Expect(2) = 1e-070
Identities = 57/71 (80%), Positives = 60/71 (84%)
Frame = -3 / -2
Query: 731 QAEPLSFLAMPAKYFPWWKACSSSTSLGHLDPSAANVPAP*GLPPWTWSMPNSLAPKV*P 552
QA+PLSF AMPAKY PWWKACSSS S GHL+PSAANVPAP GLPP T SM NSLAPKV P
Sbjct: 511 QADPLSFFAMPAKY*PWWKACSSSISDGHLEPSAANVPAPYGLPP*TLSMSNSLAPKVYP 332
Query: 551 TGTNTMPWCVS 519
TGT TMPW V+
Sbjct: 331 TGTKTMPW*VN 299
Score = 64.3 bits (134), Expect(2) = 3e-023
Identities = 28/70 (40%), Positives = 29/70 (41%)
Frame = +2 / +1
Query: 527 TTAWCLCPWATPSAPSCSAWXXXXXXXXXXXXXXXXXXXGGRARWSWSTPSTRGNTXXXX 706
TTAW P TPS PSCS W GG RWSWS PSTR +
Sbjct: 307 TTAWFSFPSGTPSVPSCSTWTKFRVAARTAQAHLPPMVRGGHLRWSWSMPSTRVSISRAS 486
Query: 707 XXXXXXLLDL 736
LLDL
Sbjct: 487 RRNSRDLLDL 516
Score = 64.3 bits (134), Expect(2) = 3e-023
Identities = 33/59 (55%), Positives = 37/59 (62%)
Frame = +2 / +1
Query: 236 RSLKFSLKKCLERWARPLSPTCQSSHRRNLQRLTVSSLGFRQGSE*WQLR*RRSSMPPV 412
RSLK S +K LERW R LS QSSH +NL+ SSL F QG *W +*R S M PV
Sbjct: 16 RSLKLSRRKYLERWVRLLSLMPQSSHHKNLRTQMGSSLVFLQGLA*WLRK*RHSLMQPV 192
Score = 41.4 bits (84), Expect(2) = 3e-046
Identities = 13/19 (68%), Positives = 16/19 (84%)
Frame = +3 / +2
Query: 675 LPPGEILRGHRQEAQGLCL 731
LPPG + RGHR+E QG+CL
Sbjct: 455 LPPGSVFRGHREETQGICL 511
>gb|BG299732.1|BG299732 HVSMEa0021J11f Hordeum vulgare seedling shoot EST library
HVcDNA0001 (Cold stress) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEa0021J11f, mRNA sequence
Length = 569
Score = 332 bits (720), Expect = 1e-090
Identities = 136/167 (81%), Positives = 146/167 (87%)
Frame = +1 / +1
Query: 91 SGHRSSETSPMAVKIYVVYYSMYGHVGKLADEIKKGALSVEGVEAKIWQVPEILSEEVLG 270
S RSS PMAVK+YVVYYSMYGHV KLADEIKKGA SVEGVE K+WQVPEIL+EEVLG
Sbjct: 67 SDPRSSHAPPMAVKVYVVYYSMYGHVAKLADEIKKGAYSVEGVEVKVWQVPEILNEEVLG 246
Query: 271 KMGAPPKPDVPVITPQELAEADGILFGFPTRFGMMAAQMKAFFDATGGLWREQSLAGKPA 450
KMGAPPK DVPVI+PQELAEADG+LFGFPTRFGMMAAQMKAFFDATGGLWREQSLAGKPA
Sbjct: 247 KMGAPPKTDVPVISPQELAEADGVLFGFPTRFGMMAAQMKAFFDATGGLWREQSLAGKPA 426
Query: 451 GMFFSXXXXXXXXXXXPLTAITQLTHHGMVFVPVGYTFGAKLFGMDQ 591
G+FFS PLTA+TQLTHHGMVFVPVGYTFGA++F MD+
Sbjct: 427 GVFFSTGTQGGGQETTPLTAVTQLTHHGMVFVPVGYTFGAQMFDMDK 567
Score = 210 bits (454), Expect(2) = 1e-062
Identities = 97/121 (80%), Positives = 101/121 (83%)
Frame = -3 / -1
Query: 464 LKNMPAGLPARLCSLQSPPVASKNAFI*AAIIPNLVGNPKRIPSASASSCGVMTGTSGLG 285
LKN PAGLPARLCSL SPPVASKNAFI AAI+PNLVGNP R PSASASS G +TGTS LG
Sbjct: 440 LKNTPAGLPARLCSLHSPPVASKNAFICAAIMPNLVGNPNRTPSASASS*GEITGTSVLG 261
Query: 284 GAPIFPSTSSERISGTCHILASTPSTDKAPFLISSASLPTCPYME*YTT*ILTAIGEVSE 105
GAPI P TSS RISGTCH L STPST+ APFLISSASL T PYME*YTT* LTA+G E
Sbjct: 260 GAPILPRTSSFRISGTCHTLTSTPSTE*APFLISSASLAT*PYME*YTT*TLTAMGGAWE 81
Query: 104 L 102
L
Sbjct: 80 L 78
Score = 187 bits (402), Expect = 1e-046
Identities = 80/141 (56%), Positives = 102/141 (72%)
Frame = -2 / -3
Query: 522 QLGNRRQRCSLLATTLGSSAEEHAGRLASEALLPPEPTGGIEERLHLSCHHSEPCRKPKE 343
QLG+ QR LL LG+ AEEHA RLA +ALLPP+P +EERLHL HH+EP R+P++
Sbjct: 498 QLGHCCQRRRLLPAALGARAEEHARRLAGQALLPPQPARRVEERLHLRRHHAEPRREPEQ 319
Query: 342 DTVSLCKFLRCDDWHVGLRGRAHLSKHFFRENFRDLPYLSLNTFNR*GTFLDLVS*FANM 163
D V L + LR D HVGL HL+K F ++ RDLP+ +L+ FNR TFLDL+S* +NM
Sbjct: 318 DAVGLRQLLRGDHRHVGLGWGTHLAKDFLVQDLRDLPHFNLHAFNRVSTFLDLIS*LSNM 139
Query: 162 PIHGIVHNVDLNRHWRGLGAP 100
IHG+VH+VDL+RH R +GAP
Sbjct: 138 TIHGVVHDVDLDRHGRRVGAP 76
Score = 171 bits (368), Expect = 5e-042
Identities = 88/166 (53%), Positives = 103/166 (62%)
Frame = +3 / +3
Query: 96 SQELRDLSNGG*DLRCVLFHVWACWQTS*RDQERCLIC*RC*G*DMAGP*NSL*RSAWKD 275
S EL S+GG LR VL HVW+C S* DQERCL+C*R G* +A P*+ S W+D
Sbjct: 72 SAELPRASHGGQGLRRVLLHVWSCC*AS**DQERCLLC*RRGG*SVASP*DPERGSPWQD 251
Query: 276 GRAP*ARRASHHTAGTCRG*RYPLWVSDKVRNDGSSDEGVLRCHRWALEGAEPRWQACRH 455
G RRA +G G R P+ V D+VR+DG +DEGVLR A+EGAEP QA
Sbjct: 252 GCPTQDRRAGDLPSGAGGGRRRPVRVPDEVRHDGGADEGVLRRDGRAVEGAEPGRQAGGR 431
Query: 456 VLQHWNPGWWPRDYTADGDYPADAPRHGVCARGLHLRRQAVRHGPG 593
VLQH +PG D AD PAD PRHGV A G+H+RR VRHG G
Sbjct: 432 VLQHGHPGRRAGDDAADSSDPADPPRHGVRAGGVHVRRPDVRHGQG 569
Score = 112 bits (240), Expect(2) = 4e-031
Identities = 55/102 (53%), Positives = 66/102 (64%)
Frame = +2 / +2
Query: 95 VTGAPRPLQWRLRSTLCTIPCMGMLAN*LTRSRKVPYLLKVLRLRYGRSLKFSLKKCLER 274
+ GAP L WR RST CT PCM ML +*L RSRKV LLK RL+ G+SL+ +K L R
Sbjct: 71 IRGAPTRLPWRSRSTSCTTPCMVMLLS*LMRSRKVLTLLKAWRLKCGKSLRS*TRKSLAR 250
Query: 275 WARPLSPTCQSSHRRNLQRLTVSSLGFRQGSE*WQLR*RRSS 400
W PTC+ S R+ +R T S G R+GS *W+ R*RRSS
Sbjct: 251 WVPHPRPTCR*SPLRSWRRPTASCSGSRRGSA*WRRR*RRSS 376
Score = 94.1 bits (199), Expect(2) = 1e-022
Identities = 51/98 (52%), Positives = 58/98 (59%)
Frame = -1 / -2
Query: 433 GSAPSRAHRWHRRTPSSELPSFRTLSETQRGYRQPLQVPAV**LARRA*GARPSFQALLQ 254
GSAPS A RRTPSS PS RT S T+ G R+P P ARR+ PS Q L +
Sbjct: 409 GSAPSTARPSRRRTPSSAPPSCRTSSGTRTGRRRPPPAPEGRSPARRSWVGHPSCQGLPR 230
Query: 253 REFQGPAIS*PQHLQQIRHLS*SRQLVCQHAHTWNSTQ 140
QG A *P LQQ +HLS*S QL QH HTW+ST+
Sbjct: 229 SGSQGLATL*PPRLQQSKHLS*SHQLA*QHDHTWSSTR 116
Score = 49.6 bits (102), Expect(2) = 1e-062
Identities = 20/27 (74%), Positives = 20/27 (74%)
Frame = -3 / -1
Query: 587 SMPNSLAPKV*PTGTNTMPWCVSWVIA 507
SM N AP V PTGTNTMPW VSWV A
Sbjct: 563 SMSNIWAPNVYPTGTNTMPWWVSWVTA 483
Score = 44.6 bits (91), Expect(2) = 4e-031
Identities = 14/20 (70%), Positives = 14/20 (70%)
Frame = +2 / +2
Query: 527 TTAWCLCPWATPSAPSCSAW 586
TTAWC C W T SAP CS W
Sbjct: 503 TTAWCSCRWGTRSAPRCSTW 562
Score = 32.7 bits (65), Expect(2) = 1e-022
Identities = 12/35 (34%), Positives = 15/35 (42%)
Frame = -1 / -2
Query: 577 TAWRRRCSPRAQTPCRXXXXXXXXXXXXXXGHHPG 473
T+ RR C+P A+TPCR PG
Sbjct: 553 TSGRRTCTPPARTPCRGGSAGSLLSAASSPARRPG 449
>gb|CB879366.1|CB879366 HP11O20T HP Hordeum vulgare subsp. vulgare cDNA clone HP11O20
5-PRIME, mRNA sequence
Length = 550
Score = 321 bits (695), Expect = 4e-087
Identities = 132/159 (83%), Positives = 139/159 (87%)
Frame = +1 / +3
Query: 91 SGHRSSETSPMAVKIYVVYYSMYGHVGKLADEIKKGALSVEGVEAKIWQVPEILSEEVLG 270
S RSS PMAVK+YVVYYSMYGHV KLADEIKKGA SVEGVE K+WQVPEIL+EEVLG
Sbjct: 72 SDPRSSHAPPMAVKVYVVYYSMYGHVAKLADEIKKGASSVEGVEVKVWQVPEILNEEVLG 251
Query: 271 KMGAPPKPDVPVITPQELAEADGILFGFPTRFGMMAAQMKAFFDATGGLWREQSLAGKPA 450
KMGAPPK DVPVI+PQELAEADG+LFGFPTRFGMMAAQMKAFFDATGGLWREQSLAGKPA
Sbjct: 252 KMGAPPKTDVPVISPQELAEADGVLFGFPTRFGMMAAQMKAFFDATGGLWREQSLAGKPA 431
Query: 451 GMFFSXXXXXXXXXXXPLTAITQLTHHGMVFVPVGYTFG 567
G+FFS PLTA+TQLTHHGMVFVPVGYTFG
Sbjct: 432 GVFFSTGTQGGGQETTPLTAVTQLTHHGMVFVPVGYTFG 548
Score = 213 bits (459), Expect(2) = 6e-062
Identities = 97/121 (80%), Positives = 102/121 (84%)
Frame = -3 / -1
Query: 464 LKNMPAGLPARLCSLQSPPVASKNAFI*AAIIPNLVGNPKRIPSASASSCGVMTGTSGLG 285
LKN PAGLPARLCSL SPPVASKNAFI AAI+PNLVGNP R PSASASS G +TGTS LG
Sbjct: 445 LKNTPAGLPARLCSLHSPPVASKNAFICAAIMPNLVGNPNRTPSASASS*GEITGTSVLG 266
Query: 284 GAPIFPSTSSERISGTCHILASTPSTDKAPFLISSASLPTCPYME*YTT*ILTAIGEVSE 105
GAPI P TSS RISGTCH L STPST++APFLISSASL T PYME*YTT* LTA+G E
Sbjct: 265 GAPILPRTSSFRISGTCHTLTSTPSTEEAPFLISSASLAT*PYME*YTT*TLTAMGGAWE 86
Query: 104 L 102
L
Sbjct: 85 L 83
Score = 188 bits (406), Expect = 3e-047
Identities = 81/141 (57%), Positives = 103/141 (73%)
Frame = -2 / -3
Query: 522 QLGNRRQRCSLLATTLGSSAEEHAGRLASEALLPPEPTGGIEERLHLSCHHSEPCRKPKE 343
QLG+ QR LL LG+ AEEHA RLA +ALLPP+P +EERLHL HH+EP R+P++
Sbjct: 503 QLGHCCQRRRLLPAALGARAEEHARRLAGQALLPPQPARRVEERLHLRRHHAEPRREPEQ 324
Query: 342 DTVSLCKFLRCDDWHVGLRGRAHLSKHFFRENFRDLPYLSLNTFNR*GTFLDLVS*FANM 163
D V L + LR D HVGL AHL+K F ++ RDLP+ +L+ FNR TFLDL+S* +NM
Sbjct: 323 DAVGLRQLLRGDHRHVGLGRGAHLAKDFLVQDLRDLPHFNLHAFNRGSTFLDLIS*LSNM 144
Query: 162 PIHGIVHNVDLNRHWRGLGAP 100
IHG+VH+VDL+RH R +GAP
Sbjct: 143 TIHGVVHDVDLDRHGRRVGAP 81
Score = 164 bits (353), Expect = 6e-040
Identities = 84/158 (53%), Positives = 99/158 (62%)
Frame = +3 / +2
Query: 96 SQELRDLSNGG*DLRCVLFHVWACWQTS*RDQERCLIC*RC*G*DMAGP*NSL*RSAWKD 275
S EL S+GG LR VL HVW+C S* DQERC +C*R G* +AGP*+ S W+D
Sbjct: 77 SAELPRASHGGQGLRRVLLHVWSCC*AS**DQERCFLC*RRGG*SVAGP*DPERGSPWQD 256
Query: 276 GRAP*ARRASHHTAGTCRG*RYPLWVSDKVRNDGSSDEGVLRCHRWALEGAEPRWQACRH 455
GR RRA +G G R P+ V D+VR+DG +DEGVLR A+EGAEP QA
Sbjct: 257 GRPSQDRRAGDLPSGAGGGRRRPVRVPDEVRHDGGADEGVLRRDGRAVEGAEPGRQAGGR 436
Query: 456 VLQHWNPGWWPRDYTADGDYPADAPRHGVCARGLHLRR 569
VLQH +PG D AD PAD PRHGV A G+H+RR
Sbjct: 437 VLQHGHPGRRAGDDAADSSDPADPPRHGVRAGGVHVRR 550
Score = 115 bits (245), Expect(2) = 2e-028
Identities = 57/102 (55%), Positives = 67/102 (65%)
Frame = +2 / +1
Query: 95 VTGAPRPLQWRLRSTLCTIPCMGMLAN*LTRSRKVPYLLKVLRLRYGRSLKFSLKKCLER 274
+ GAP L WR RST CT PCM ML +*L RSRKV LLK RL+ GRSL+ +K L R
Sbjct: 76 IRGAPTRLPWRSRSTSCTTPCMVMLLS*LMRSRKVLPLLKAWRLKCGRSLRS*TRKSLAR 255
Query: 275 WARPLSPTCQSSHRRNLQRLTVSSLGFRQGSE*WQLR*RRSS 400
WA PTC+ S R+ +R T S G R+GS *W+ R*RRSS
Sbjct: 256 WAPLPRPTCR*SPLRSWRRPTASCSGSRRGSA*WRRR*RRSS 381
Score = 100 bits (214), Expect(2) = 3e-024
Identities = 53/98 (54%), Positives = 60/98 (61%)
Frame = -1 / -2
Query: 433 GSAPSRAHRWHRRTPSSELPSFRTLSETQRGYRQPLQVPAV**LARRA*GARPSFQALLQ 254
GSAPS A RRTPSS PS RT S T+ G R+P P ARR+ RPS Q L +
Sbjct: 414 GSAPSTARPSRRRTPSSAPPSCRTSSGTRTGRRRPPPAPEGRSPARRSWEGRPSCQGLPR 235
Query: 253 REFQGPAIS*PQHLQQIRHLS*SRQLVCQHAHTWNSTQ 140
QGPA *P LQQ +HLS*S QL QH HTW+ST+
Sbjct: 234 SGSQGPATL*PPRLQQRKHLS*SHQLA*QHDHTWSSTR 121
Score = 45.1 bits (92), Expect(2) = 6e-062
Identities = 17/21 (80%), Positives = 17/21 (80%)
Frame = -3 / -1
Query: 569 APKV*PTGTNTMPWCVSWVIA 507
AP V PTGTNTMPW VSWV A
Sbjct: 550 APNVYPTGTNTMPWWVSWVTA 488
Score = 30.9 bits (61), Expect(2) = 2e-028
Identities = 10/14 (71%), Positives = 10/14 (71%)
Frame = +2 / +1
Query: 527 TTAWCLCPWATPSA 568
TTAWC C W T SA
Sbjct: 508 TTAWCSCRWGTRSA 549
Score = 30.9 bits (61), Expect(2) = 3e-024
Identities = 11/32 (34%), Positives = 13/32 (40%)
Frame = -1 / -2
Query: 568 RRRCSPRAQTPCRXXXXXXXXXXXXXXGHHPG 473
RR C+P A+TPCR PG
Sbjct: 549 RRTCTPPARTPCRGGSAGSLLSAASSPARRPG 454
>gb|BU980638.1|BU980638 HA21D22r HA Hordeum vulgare subsp. vulgare cDNA clone HA21D22
5-PRIME, mRNA sequence
Length = 518
Score = 315 bits (683), Expect = 2e-085
Identities = 130/157 (82%), Positives = 137/157 (87%)
Frame = +1 / +1
Query: 91 SGHRSSETSPMAVKIYVVYYSMYGHVGKLADEIKKGALSVEGVEAKIWQVPEILSEEVLG 270
S RSS PMAVK+YVVYYSMYGHV KLADEIKKGA SVEGVE K+WQVPEIL+EEVLG
Sbjct: 46 SDPRSSHAPPMAVKVYVVYYSMYGHVAKLADEIKKGASSVEGVEVKVWQVPEILNEEVLG 225
Query: 271 KMGAPPKPDVPVITPQELAEADGILFGFPTRFGMMAAQMKAFFDATGGLWREQSLAGKPA 450
KMGAPPK DVPVI+PQELAEADG+LFGFPTRFGMMAAQMKAFFDATGGLWREQSLAGKPA
Sbjct: 226 KMGAPPKTDVPVISPQELAEADGVLFGFPTRFGMMAAQMKAFFDATGGLWREQSLAGKPA 405
Query: 451 GMFFSXXXXXXXXXXXPLTAITQLTHHGMVFVPVGYT 561
G+FFS PLTA+TQLTHHGMVFVPVGYT
Sbjct: 406 GVFFSTGTQGGGQETTPLTAVTQLTHHGMVFVPVGYT 516
Score = 213 bits (459), Expect(2) = 2e-060
Identities = 97/121 (80%), Positives = 102/121 (84%)
Frame = -3 / -1
Query: 464 LKNMPAGLPARLCSLQSPPVASKNAFI*AAIIPNLVGNPKRIPSASASSCGVMTGTSGLG 285
LKN PAGLPARLCSL SPPVASKNAFI AAI+PNLVGNP R PSASASS G +TGTS LG
Sbjct: 419 LKNTPAGLPARLCSLHSPPVASKNAFICAAIMPNLVGNPNRTPSASASS*GEITGTSVLG 240
Query: 284 GAPIFPSTSSERISGTCHILASTPSTDKAPFLISSASLPTCPYME*YTT*ILTAIGEVSE 105
GAPI P TSS RISGTCH L STPST++APFLISSASL T PYME*YTT* LTA+G E
Sbjct: 239 GAPILPRTSSFRISGTCHTLTSTPSTEEAPFLISSASLAT*PYME*YTT*TLTAMGGAWE 60
Query: 104 L 102
L
Sbjct: 59 L 57
Score = 188 bits (406), Expect = 3e-047
Identities = 81/141 (57%), Positives = 103/141 (73%)
Frame = -2 / -3
Query: 522 QLGNRRQRCSLLATTLGSSAEEHAGRLASEALLPPEPTGGIEERLHLSCHHSEPCRKPKE 343
QLG+ QR LL LG+ AEEHA RLA +ALLPP+P +EERLHL HH+EP R+P++
Sbjct: 477 QLGHCCQRRRLLPAALGARAEEHARRLAGQALLPPQPARRVEERLHLRRHHAEPRREPEQ 298
Query: 342 DTVSLCKFLRCDDWHVGLRGRAHLSKHFFRENFRDLPYLSLNTFNR*GTFLDLVS*FANM 163
D V L + LR D HVGL AHL+K F ++ RDLP+ +L+ FNR TFLDL+S* +NM
Sbjct: 297 DAVGLRQLLRGDHRHVGLGRGAHLAKDFLVQDLRDLPHFNLHAFNRGSTFLDLIS*LSNM 118
Query: 162 PIHGIVHNVDLNRHWRGLGAP 100
IHG+VH+VDL+RH R +GAP
Sbjct: 117 TIHGVVHDVDLDRHGRRVGAP 55
Score = 160 bits (343), Expect = 1e-038
Identities = 82/156 (52%), Positives = 97/156 (62%)
Frame = +3 / +3
Query: 96 SQELRDLSNGG*DLRCVLFHVWACWQTS*RDQERCLIC*RC*G*DMAGP*NSL*RSAWKD 275
S EL S+GG LR VL HVW+C S* DQERC +C*R G* +AGP*+ S W+D
Sbjct: 51 SAELPRASHGGQGLRRVLLHVWSCC*AS**DQERCFLC*RRGG*SVAGP*DPERGSPWQD 230
Query: 276 GRAP*ARRASHHTAGTCRG*RYPLWVSDKVRNDGSSDEGVLRCHRWALEGAEPRWQACRH 455
GR RRA +G G R P+ V D+VR+DG +DEGVLR A+EGAEP QA
Sbjct: 231 GRPSQDRRAGDLPSGAGGGRRRPVRVPDEVRHDGGADEGVLRRDGRAVEGAEPGRQAGGR 410
Query: 456 VLQHWNPGWWPRDYTADGDYPADAPRHGVCARGLHL 563
VLQH +PG D AD PAD PRHGV A G+H+
Sbjct: 411 VLQHGHPGRRAGDDAADSSDPADPPRHGVRAGGVHV 518
Score = 115 bits (245), Expect(2) = 1e-027
Identities = 57/102 (55%), Positives = 67/102 (65%)
Frame = +2 / +2
Query: 95 VTGAPRPLQWRLRSTLCTIPCMGMLAN*LTRSRKVPYLLKVLRLRYGRSLKFSLKKCLER 274
+ GAP L WR RST CT PCM ML +*L RSRKV LLK RL+ GRSL+ +K L R
Sbjct: 50 IRGAPTRLPWRSRSTSCTTPCMVMLLS*LMRSRKVLPLLKAWRLKCGRSLRS*TRKSLAR 229
Query: 275 WARPLSPTCQSSHRRNLQRLTVSSLGFRQGSE*WQLR*RRSS 400
WA PTC+ S R+ +R T S G R+GS *W+ R*RRSS
Sbjct: 230 WAPLPRPTCR*SPLRSWRRPTASCSGSRRGSA*WRRR*RRSS 355
Score = 100 bits (214), Expect(2) = 6e-023
Identities = 53/98 (54%), Positives = 60/98 (61%)
Frame = -1 / -2
Query: 433 GSAPSRAHRWHRRTPSSELPSFRTLSETQRGYRQPLQVPAV**LARRA*GARPSFQALLQ 254
GSAPS A RRTPSS PS RT S T+ G R+P P ARR+ RPS Q L +
Sbjct: 388 GSAPSTARPSRRRTPSSAPPSCRTSSGTRTGRRRPPPAPEGRSPARRSWEGRPSCQGLPR 209
Query: 253 REFQGPAIS*PQHLQQIRHLS*SRQLVCQHAHTWNSTQ 140
QGPA *P LQQ +HLS*S QL QH HTW+ST+
Sbjct: 208 SGSQGPATL*PPRLQQRKHLS*SHQLA*QHDHTWSSTR 95
Score = 40.0 bits (81), Expect(2) = 2e-060
Identities = 14/16 (87%), Positives = 14/16 (87%)
Frame = -3 / -1
Query: 554 PTGTNTMPWCVSWVIA 507
PTGTNTMPW VSWV A
Sbjct: 509 PTGTNTMPWWVSWVTA 462
Score = 28.1 bits (55), Expect(2) = 1e-027
Identities = 8/11 (72%), Positives = 8/11 (72%)
Frame = +2 / +2
Query: 527 TTAWCLCPWAT 559
TTAWC C W T
Sbjct: 482 TTAWCSCRWGT 514
Score = 26.7 bits (52), Expect(2) = 6e-023
Identities = 9/29 (31%), Positives = 11/29 (37%)
Frame = -1 / -2
Query: 559 CSPRAQTPCRXXXXXXXXXXXXXXGHHPG 473
C+P A+TPCR PG
Sbjct: 514 CTPPARTPCRGGSAGSLLSAASSPARRPG 428
>gb|BI948142.1|BI948142 HVSMEl0008F18f Hordeum vulgare spike EST library HVcDNA0012
(Fusarium infected) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEl0008F18f, mRNA sequence
Length = 1037
Score = 202 bits (435), Expect(3) = 4e-081
Identities = 82/117 (70%), Positives = 95/117 (81%)
Frame = +1 / +2
Query: 280 APPKPDVPVITPQELAEADGILFGFPTRFGMMAAQMKAFFDATGGLWREQSLAGKPAGMF 459
AP + D PVIT ++LAEAD ILFGFPTRFGMMAAQMKAFFD+TGGLW++QSLAGKPA +F
Sbjct: 233 APGREDHPVITARQLAEADSILFGFPTRFGMMAAQMKAFFDSTGGLWQQQSLAGKPAAVF 412
Query: 460 FSXXXXXXXXXXXPLTAITQLTHHGMVFVPVGYTFGAKLFGMDQVQGGSPYGAGTFA 630
F+ LTA+TQLTHHGM+FVPVG+T GA +F M QV+GGSPYGAGTFA
Sbjct: 413 FATGTQGGGQETTALTAVTQLTHHGMLFVPVGFTHGAGMFDMAQVKGGSPYGAGTFA 583
Score = 103 bits (219), Expect = 2e-021
Identities = 48/102 (47%), Positives = 62/102 (60%)
Frame = +3 / +1
Query: 306 HHTAGTCRG*RYPLWVSDKVRNDGSSDEGVLRCHRWALEGAEPRWQACRHVLQHWNPGWW 485
HH RG ++P+ + D VR+DG +DEG+L HR L A PR QA L+H +PG
Sbjct: 259 HHGEAAGRGRQHPVRLPDAVRHDGRADEGLL*LHRRPLAAAVPRRQARGRFLRHGHPGRR 438
Query: 486 PRDYTADGDYPADAPRHGVCARGLHLRRQAVRHGPGPGWQPL 611
P D++A ADAPRH V AR +H R + VRHGP G QP+
Sbjct: 439 PGDHSAHRRDAADAPRHAVRARRVHARCRHVRHGPSQGRQPV 564
Score = 88.1 bits (186), Expect(3) = 4e-081
Identities = 39/66 (59%), Positives = 45/66 (68%)
Frame = +1 / +2
Query: 91 SGHRSSETSPMAVKIYVVYYSMYGHVGKLADEIKKGALSVEGVEAKIWQVPEILSEEVLG 270
S ++ MA KIY+VYYS GHV LA+EIKKGA SV VE IW+VPE L E+VLG
Sbjct: 41 SNQGDHNSTAMATKIYIVYYST*GHVATLAEEIKKGAGSVPDVEVTIWRVPETLPEDVLG 220
Query: 271 KMGAPP 288
KM A P
Sbjct: 221 KMHAAP 238
Score = 79.0 bits (166), Expect(4) = 2e-052
Identities = 38/61 (62%), Positives = 40/61 (65%)
Frame = -3 / -3
Query: 461 KNMPAGLPARLCSLQSPPVASKNAFI*AAIIPNLVGNPKRIPSASASSCGVMTGTSGLGG 282
K AGLPAR C Q PPV SK AFI AAI+PN VG P R+ SASAS VMTG S G
Sbjct: 414 KKTAAGLPARDCCCQRPPVESKKAFICAAIMPNRVGKPNRMLSASASCLAVMTGWSSRPG 235
Query: 281 A 279
A
Sbjct: 234 A 232
Score = 73.5 bits (154), Expect(4) = 2e-052
Identities = 35/56 (62%), Positives = 41/56 (73%)
Frame = -3 / -3
Query: 287 GGAPIFPSTSSERISGTCHILASTPSTDKAPFLISSASLPTCPYME*YTT*ILTAI 120
G A IFPSTSS +SGT ++ ST T+ APFLISSAS+ TCP +E* T *IL AI
Sbjct: 237 GAACIFPSTSSGSVSGTRQMVTSTSGTEPAPFLISSASVATCPQVE**TM*ILVAI 70
Score = 72.5 bits (152), Expect(4) = 2e-052
Identities = 30/46 (65%), Positives = 33/46 (71%)
Frame = -3 / -3
Query: 644 LDPSAANVPAP*GLPPWTWSMPNSLAPKV*PTGTNTMPWCVSWVIA 507
L + A VPAP GLPP TW+M N AP V PTGTN+MPWCVS V A
Sbjct: 597 LPSAPAKVPAPYGLPPLTWAMSNMPAPCVNPTGTNSMPWCVSCVTA 460
Score = 51.0 bits (105), Expect(3) = 4e-081
Identities = 21/29 (72%), Positives = 24/29 (82%)
Frame = +1 / +2
Query: 631 ADGSRWPSEVELEHAFHQGKYFAGIAKKL 717
ADGSR P++ EL + HQGKYFAGIAKKL
Sbjct: 587 ADGSRVPTDAELALSAHQGKYFAGIAKKL 673
Score = 38.2 bits (77), Expect(4) = 2e-052
Identities = 18/30 (60%), Positives = 22/30 (73%)
Frame = -3 / -3
Query: 719 LSFLAMPAKYFPWWKACSSSTSLGHLDPSA 630
+SFLA+PAKYFP +SS S+G L PSA
Sbjct: 675 VSFLAIPAKYFP*CADKASSASVGTLLPSA 586
>gb|BM443592.2|BM443592 EBro02_SQ005_M20_R root, 3 week, hydroponic grown, low nitrogen, cv
Optic, EBro02 Hordeum vulgare subsp. vulgare cDNA clone
EBro02_SQ005_M20 5', mRNA sequence
Length = 450
Score = 297 bits (643), Expect = 6e-080
Identities = 120/144 (83%), Positives = 127/144 (88%)
Frame = +1 / +3
Query: 316 QELAEADGILFGFPTRFGMMAAQMKAFFDATGGLWREQSLAGKPAGMFFSXXXXXXXXXX 495
QELAEADG+LFGFPTRFGMMAAQMKAFFDATGGLWREQSLAGKPAG+FFS
Sbjct: 3 QELAEADGVLFGFPTRFGMMAAQMKAFFDATGGLWREQSLAGKPAGVFFSTGTQGGGQET 182
Query: 496 XPLTAITQLTHHGMVFVPVGYTFGAKLFGMDQVQGGSPYGAGTFAADGSRWPSEVELEHA 675
PLTA+TQLTHHGMVFVPVGYTFGAK+F MD+VQGGSPYGAGTFA DGSRWPSE+ELEHA
Sbjct: 183 TPLTAVTQLTHHGMVFVPVGYTFGAKMFDMDKVQGGSPYGAGTFAGDGSRWPSEMELEHA 362
Query: 676 FHQGKYFAGIAKKLKGSA*SAHTP 747
FHQGKYFAGIAKKLKGS+ H P
Sbjct: 363 FHQGKYFAGIAKKLKGSSA*VHDP 434
Score = 152 bits (327), Expect(2) = 4e-060
Identities = 62/81 (76%), Positives = 62/81 (76%)
Frame = -3 / -3
Query: 749 RGVCADQAEPLSFLAMPAKYFPWWKACSSSTSLGHLDPSAANVPAP*GLPPWTWSMPNSL 570
RG C EP SFLAMPAKY PWWKACSSS S GHLDPS ANVPAP GLPP T SM N L
Sbjct: 436 RGSCTQAEEPFSFLAMPAKYLPWWKACSSSISDGHLDPSPANVPAPYGLPPCTLSMSNIL 257
Query: 569 APKV*PTGTNTMPWCVSWVIA 507
AP V PTGTNTMPW VSWV A
Sbjct: 256 APNVYPTGTNTMPWWVSWVTA 194
Score = 116 bits (248), Expect(2) = 1e-029
Identities = 55/99 (55%), Positives = 65/99 (65%)
Frame = +3 / +2
Query: 315 AGTCRG*RYPLWVSDKVRNDGSSDEGVLRCHRWALEGAEPRWQACRHVLQHWNPGWWPRD 494
+G G R P+ V D+VR+DG +DEGVLR A+EGAEP QA VLQH +PG D
Sbjct: 2 SGAGGGRRRPVRVPDEVRHDGGADEGVLRRDGRAVEGAEPGRQAGGRVLQHGHPGRRAGD 181
Query: 495 YTADGDYPADAPRHGVCARGLHLRRQAVRHGPGPGWQPL 611
AD PAD PRHGV A G+H+RRQ VRHG G G QP+
Sbjct: 182 DAADSSDPADPPRHGVRAGGVHVRRQDVRHGQGAGRQPV 298
Score = 99.6 bits (211), Expect(2) = 4e-060
Identities = 43/49 (87%), Positives = 44/49 (89%)
Frame = -3 / -3
Query: 464 LKNMPAGLPARLCSLQSPPVASKNAFI*AAIIPNLVGNPKRIPSASASS 318
LKN PAGLPARLCSL SPPVASKNAFI AAI+PNLVGNP R PSASASS
Sbjct: 151 LKNTPAGLPARLCSLHSPPVASKNAFICAAIMPNLVGNPNRTPSASASS 5
Score = 90.4 bits (191), Expect(2) = 1e-030
Identities = 39/69 (56%), Positives = 49/69 (71%)
Frame = -2 / -2
Query: 522 QLGNRRQRCSLLATTLGSSAEEHAGRLASEALLPPEPTGGIEERLHLSCHHSEPCRKPKE 343
QLG+ QR LL LG+ AEEHA RLA +ALLPP+P +EERLHL HH+EP R+P++
Sbjct: 209 QLGHCCQRRRLLPAALGARAEEHARRLAGQALLPPQPARRVEERLHLRRHHAEPRREPEQ 30
Query: 342 DTVSLCKFL 316
D V L + L
Sbjct: 29 DAVGLRQLL 3
Score = 63.4 bits (132), Expect(2) = 1e-030
Identities = 30/51 (58%), Positives = 31/51 (60%)
Frame = -2 / -2
Query: 723 ALELLGDAREVFPLVEGVLQLHLARPPRPXXXXXXXXXXXATLDLVHAEQL 571
A +LLGDA EV LVEGVLQLHL RPPRP A L LVH E L
Sbjct: 410 AFQLLGDAGEVLALVEGVLQLHLXRPPRPVPGERAGPVRAAALHLVHVEHL 258
Score = 33.6 bits (67), Expect(2) = 1e-029
Identities = 12/17 (70%), Positives = 15/17 (88%)
Frame = +3 / +2
Query: 675 LPPGEILRGHRQEAQGL 725
LPPG++LR HRQEA+ L
Sbjct: 362 LPPGQVLRRHRQEAERL 412
>gb|BG299768.1|BG299768 HVSMEa0021L17f Hordeum vulgare seedling shoot EST library
HVcDNA0001 (Cold stress) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEa0021L17f, mRNA sequence
Length = 572
Score = 209 bits (450), Expect(2) = 2e-075
Identities = 84/117 (71%), Positives = 96/117 (82%)
Frame = +1 / +3
Query: 280 APPKPDVPVITPQELAEADGILFGFPTRFGMMAAQMKAFFDATGGLWREQSLAGKPAGMF 459
AP + D PVIT +LAEADGILFGFPTRFGMMAAQMKAFFD+TGGLW+ QSL+GKPAG+F
Sbjct: 216 APGREDHPVITASQLAEADGILFGFPTRFGMMAAQMKAFFDSTGGLWQAQSLSGKPAGVF 395
Query: 460 FSXXXXXXXXXXXPLTAITQLTHHGMVFVPVGYTFGAKLFGMDQVQGGSPYGAGTFA 630
F+ LTA+TQLTHHGM+FVPVGYT GA +F MD+V+GGSPYGAGTFA
Sbjct: 396 FATGTQGGGQETTALTAVTQLTHHGMLFVPVGYTHGAGMFAMDEVKGGSPYGAGTFA 566
Score = 105 bits (223), Expect(2) = 4e-022
Identities = 48/95 (50%), Positives = 62/95 (65%)
Frame = +3 / +2
Query: 327 RG*RYPLWVSDKVRNDGSSDEGVLRCHRWALEGAEPRWQACRHVLQHWNPGWWPRDYTAD 506
RG R+P+ +SD VR+DG +DEG+LR HR L GAEP +A +L+H +PG D+
Sbjct: 263 RGRRHPVRLSDAVRHDGGADEGLLRLHRRPLAGAEPLGKARGRLLRHGHPGRRAGDHGPH 442
Query: 507 GDYPADAPRHGVCARGLHLRRQAVRHGPGPGWQPL 611
G PADA RH V A +H RR+ VRHG G G QP+
Sbjct: 443 GRDPADASRHAVRAGRVHARRRHVRHGRGQGRQPV 547
Score = 94.5 bits (200), Expect(2) = 2e-075
Identities = 40/58 (68%), Positives = 45/58 (77%)
Frame = +1 / +3
Query: 115 SPMAVKIYVVYYSMYGHVGKLADEIKKGALSVEGVEAKIWQVPEILSEEVLGKMGAPP 288
S MA KIY+VYYS +GHV LA+E+KKGA SV GVE IW+VPE L EEVLGKM A P
Sbjct: 48 SAMATKIYIVYYSTWGHVATLAEEMKKGADSVPGVEVTIWRVPETLPEEVLGKMHAAP 221
Score = 84.9 bits (179), Expect(3) = 1e-048
Identities = 38/61 (62%), Positives = 42/61 (68%)
Frame = -3 / -2
Query: 461 KNMPAGLPARLCSLQSPPVASKNAFI*AAIIPNLVGNPKRIPSASASSCGVMTGTSGLGG 282
K PAG P RLC+ Q PPV SK AFI AAI+PN VG P R+PSASAS V+TG S G
Sbjct: 397 KKTPAGFPERLCACQRPPVESKKAFICAAIMPNRVGKPNRMPSASASWLAVITGWSSRPG 218
Query: 281 A 279
A
Sbjct: 217 A 215
Score = 81.7 bits (172), Expect(3) = 1e-048
Identities = 36/58 (62%), Positives = 43/58 (74%)
Frame = -3 / -2
Query: 287 GGAPIFPSTSSERISGTCHILASTPSTDKAPFLISSASLPTCPYME*YTT*ILTAIGE 114
G A IFPSTSS +SGT ++ STP T+ APF ISSAS+ TCP +E*YT *IL AI +
Sbjct: 220 GAACIFPSTSSGSVSGTRQMVTSTPGTESAPFFISSASVATCPQVE*YTM*ILVAIAD 47
Score = 65.7 bits (137), Expect(3) = 1e-048
Identities = 29/41 (70%), Positives = 30/41 (73%)
Frame = -3 / -2
Query: 629 ANVPAP*GLPPWTWSMPNSLAPKV*PTGTNTMPWCVSWVIA 507
A VPAP GLPP T SM N AP V PTGTN+MP CVSWV A
Sbjct: 565 AKVPAPYGLPPLTSSMANMPAPCVYPTGTNSMP*CVSWVTA 443
Score = 22.1 bits (42), Expect(2) = 4e-022
Identities = 8/10 (80%), Positives = 8/10 (80%)
Frame = +2 / +1
Query: 119 QWRLRSTLCT 148
QWR RST CT
Sbjct: 52 QWRPRST*CT 81
>gb|BM374974.1|BM374974 EBma05_SQ003_O08_R maternal, 12 DPA, no treatment, cv Optic, EBma05
Hordeum vulgare subsp. vulgare cDNA clone
EBma05_SQ003_O08 5', mRNA sequence
Length = 406
Score = 281 bits (608), Expect = 4e-075
Identities = 112/135 (82%), Positives = 119/135 (88%)
Frame = +1 / +1
Query: 277 GAPPKPDVPVITPQELAEADGILFGFPTRFGMMAAQMKAFFDATGGLWREQSLAGKPAGM 456
GAPPK DVPVI+PQELAEADG+LFGFPTRFGMMAAQMKAFFDATGGLWREQSLAGKPAG+
Sbjct: 1 GAPPKTDVPVISPQELAEADGVLFGFPTRFGMMAAQMKAFFDATGGLWREQSLAGKPAGV 180
Query: 457 FFSXXXXXXXXXXXPLTAITQLTHHGMVFVPVGYTFGAKLFGMDQVQGGSPYGAGTFAAD 636
FFS PLTA+TQLTHHGMVFVPVGYTFGAK+F MD+VQGGSPYGAGT D
Sbjct: 181 FFSTGTQGGGQETTPLTAVTQLTHHGMVFVPVGYTFGAKMFDMDKVQGGSPYGAGTSPGD 360
Query: 637 GSRWPSEVELEHAFH 681
GSRWPSE+ELEHAFH
Sbjct: 361 GSRWPSEMELEHAFH 405
Score = 116 bits (249), Expect(2) = 2e-051
Identities = 52/62 (83%), Positives = 54/62 (87%)
Frame = -3 / -3
Query: 464 LKNMPAGLPARLCSLQSPPVASKNAFI*AAIIPNLVGNPKRIPSASASSCGVMTGTSGLG 285
LKN PAGLPARLCSL SPPVASKNAFI AAI+PNLVGNP R PSASASS G +TGTS LG
Sbjct: 188 LKNTPAGLPARLCSLHSPPVASKNAFICAAIMPNLVGNPNRTPSASASS*GEITGTSVLG 9
Query: 284 GA 279
GA
Sbjct: 8 GA 3
Score = 116 bits (249), Expect = 1e-025
Identities = 57/106 (53%), Positives = 67/106 (63%)
Frame = +3 / +3
Query: 294 RRASHHTAGTCRG*RYPLWVSDKVRNDGSSDEGVLRCHRWALEGAEPRWQACRHVLQHWN 473
RRA + G R P+ V D+VR+DG +DEGVLR A+EGAEP QA VLQH +
Sbjct: 18 RRAGDLPSRAGGGRRRPVRVPDEVRHDGGADEGVLRRDGRAVEGAEPGRQAGGRVLQHGH 197
Query: 474 PGWWPRDYTADGDYPADAPRHGVCARGLHLRRQAVRHGPGPGWQPL 611
PG D AD PAD PRHGV A G+H+RRQ VRHG G G QP+
Sbjct: 198 PGRRAGDDAADSSDPADPPRHGVRAGGVHVRRQDVRHGQGAGRQPV 335
Score = 106 bits (226), Expect(2) = 2e-051
Identities = 44/58 (75%), Positives = 45/58 (77%)
Frame = -3 / -3
Query: 680 WKACSSSTSLGHLDPSAANVPAP*GLPPWTWSMPNSLAPKV*PTGTNTMPWCVSWVIA 507
WKACSSS S GHLDPS +VPAP GLPP T SM N LAP V PTGTNTMPW VSWV A
Sbjct: 404 WKACSSSISDGHLDPSPGDVPAPYGLPPCTLSMSNILAPNVYPTGTNTMPWWVSWVTA 231
Score = 102 bits (217), Expect(2) = 1e-028
Identities = 45/78 (57%), Positives = 55/78 (70%)
Frame = -2 / -2
Query: 522 QLGNRRQRCSLLATTLGSSAEEHAGRLASEALLPPEPTGGIEERLHLSCHHSEPCRKPKE 343
QLG+ QR LL LG+ AEEHA RLA +ALLPP+P +EERLHL HH+EP R+P++
Sbjct: 246 QLGHCCQRRRLLPAALGARAEEHARRLAGQALLPPQPARRVEERLHLRRHHAEPRREPEQ 67
Query: 342 DTVSLCKFLRCDDWHVGL 289
D V L + LR D HVGL
Sbjct: 66 DAVGLRQLLRGDHRHVGL 13
Score = 44.6 bits (91), Expect(2) = 1e-028
Identities = 21/37 (56%), Positives = 21/37 (56%)
Frame = -2 / -2
Query: 681 VEGVLQLHLARPPRPXXXXXXXXXXXATLDLVHAEQL 571
VEGVLQLHL RPPRP A L LVH E L
Sbjct: 405 VEGVLQLHLRRPPRPVPGRRAGPVRAAALHLVHVEHL 295
>gb|CB877294.1|CB877294 HP04E23T HP Hordeum vulgare subsp. vulgare cDNA clone HP04E23
5-PRIME, mRNA sequence
Length = 606
Score = 201 bits (434), Expect(2) = 3e-073
Identities = 82/117 (70%), Positives = 93/117 (79%)
Frame = +1 / +1
Query: 280 APPKPDVPVITPQELAEADGILFGFPTRFGMMAAQMKAFFDATGGLWREQSLAGKPAGMF 459
AP + D PVIT +LAEADGILFGFPTRFGMMAAQMKAFFD+TGGLW+ QSL+GKPAG+F
Sbjct: 226 APGREDHPVITASQLAEADGILFGFPTRFGMMAAQMKAFFDSTGGLWQAQSLSGKPAGVF 405
Query: 460 FSXXXXXXXXXXXPLTAITQLTHHGMVFVPVGYTFGAKLFGMDQVQGGSPYGAGTFA 630
F+ LT QLTHHGM+FVPVGYT GA +F MD+V+GGSPYGAGTFA
Sbjct: 406 FATGTQGGGQETTALTGRDQLTHHGMLFVPVGYTHGAGMFAMDEVKGGSPYGAGTFA 576
Score = 105 bits (223), Expect(2) = 4e-022
Identities = 48/95 (50%), Positives = 62/95 (65%)
Frame = +3 / +3
Query: 327 RG*RYPLWVSDKVRNDGSSDEGVLRCHRWALEGAEPRWQACRHVLQHWNPGWWPRDYTAD 506
RG R+P+ +SD VR+DG +DEG+LR HR L GAEP +A +L+H +PG D+
Sbjct: 273 RGRRHPVRLSDAVRHDGGADEGLLRLHRRPLAGAEPLGKARGRLLRHGHPGRRAGDHGPH 452
Query: 507 GDYPADAPRHGVCARGLHLRRQAVRHGPGPGWQPL 611
G PADA RH V A +H RR+ VRHG G G QP+
Sbjct: 453 GP*PADASRHAVRAGRVHARRRHVRHGRGQGRQPV 557
Score = 94.5 bits (200), Expect(2) = 3e-073
Identities = 40/58 (68%), Positives = 45/58 (77%)
Frame = +1 / +1
Query: 115 SPMAVKIYVVYYSMYGHVGKLADEIKKGALSVEGVEAKIWQVPEILSEEVLGKMGAPP 288
S MA KIY+VYYS +GHV LA+E+KKGA SV GVE IW+VPE L EEVLGKM A P
Sbjct: 58 SAMATKIYIVYYSTWGHVATLAEEMKKGADSVPGVEVTIWRVPETLPEEVLGKMHAAP 231
Score = 84.9 bits (179), Expect(3) = 6e-048
Identities = 38/61 (62%), Positives = 42/61 (68%)
Frame = -3 / -2
Query: 461 KNMPAGLPARLCSLQSPPVASKNAFI*AAIIPNLVGNPKRIPSASASSCGVMTGTSGLGG 282
K PAG P RLC+ Q PPV SK AFI AAI+PN VG P R+PSASAS V+TG S G
Sbjct: 407 KKTPAGFPERLCACQRPPVESKKAFICAAIMPNRVGKPNRMPSASASWLAVITGWSSRPG 228
Query: 281 A 279
A
Sbjct: 227 A 225
Score = 81.7 bits (172), Expect(3) = 6e-048
Identities = 36/58 (62%), Positives = 43/58 (74%)
Frame = -3 / -2
Query: 287 GGAPIFPSTSSERISGTCHILASTPSTDKAPFLISSASLPTCPYME*YTT*ILTAIGE 114
G A IFPSTSS +SGT ++ STP T+ APF ISSAS+ TCP +E*YT *IL AI +
Sbjct: 230 GAACIFPSTSSGSVSGTRQMVTSTPGTESAPFFISSASVATCPQVE*YTM*ILVAIAD 57
Score = 63.4 bits (132), Expect(3) = 6e-048
Identities = 28/43 (65%), Positives = 30/43 (69%)
Frame = -3 / -2
Query: 644 LDPSAANVPAP*GLPPWTWSMPNSLAPKV*PTGTNTMPWCVSW 516
L + A VPAP GLPP T SM N AP V PTGTN+MP CVSW
Sbjct: 590 LPSAPAKVPAPYGLPPLTSSMANMPAPCVYPTGTNSMP*CVSW 462
Score = 22.1 bits (42), Expect(2) = 4e-022
Identities = 8/10 (80%), Positives = 8/10 (80%)
Frame = +2 / +2
Query: 119 QWRLRSTLCT 148
QWR RST CT
Sbjct: 62 QWRPRST*CT 91
>gb|BF254992.2|BF254992 HVSMEf0005K05f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEf0005K05f, mRNA sequence
Length = 594
Score = 192 bits (414), Expect(2) = 3e-069
Identities = 77/110 (70%), Positives = 90/110 (81%)
Frame = +1 / +3
Query: 280 APPKPDVPVITPQELAEADGILFGFPTRFGMMAAQMKAFFDATGGLWREQSLAGKPAGMF 459
AP + D PVIT Q+LAEADG+LFGFPTRFGMMAAQMKAFFD+TGGLW+ QSLAGKPAG+F
Sbjct: 237 APGREDHPVITAQQLAEADGVLFGFPTRFGMMAAQMKAFFDSTGGLWQAQSLAGKPAGVF 416
Query: 460 FSXXXXXXXXXXXPLTAITQLTHHGMVFVPVGYTFGAKLFGMDQVQGGSP 609
F+ LTA+TQLTHHGM+FVPVGYT GA +F +D+V+GGSP
Sbjct: 417 FATGTQGGGQETTALTAVTQLTHHGMLFVPVGYTHGAGMFAVDKVKGGSP 566
Score = 90.0 bits (190), Expect(3) = 9e-047
Identities = 40/61 (65%), Positives = 43/61 (70%)
Frame = -3 / -3
Query: 461 KNMPAGLPARLCSLQSPPVASKNAFI*AAIIPNLVGNPKRIPSASASSCGVMTGTSGLGG 282
K PAGLPAR C+ Q PPV SK AFI AAI+PN VG P R PSASAS C V+TG S G
Sbjct: 418 KKTPAGLPARDCACQRPPVESKKAFICAAIMPNRVGKPNRTPSASASCCAVITGWSSRPG 239
Query: 281 A 279
A
Sbjct: 238 A 236
Score = 90.0 bits (190), Expect(2) = 3e-069
Identities = 37/58 (63%), Positives = 45/58 (77%)
Frame = +1 / +3
Query: 115 SPMAVKIYVVYYSMYGHVGKLADEIKKGALSVEGVEAKIWQVPEILSEEVLGKMGAPP 288
S MA KIY+VYYS +GHV LA+E+K+GA SV GVE +W+V E L+EEVLGKM A P
Sbjct: 69 SAMATKIYIVYYSTWGHVATLAEEMKRGADSVPGVEVTVWRVAETLAEEVLGKMHAAP 242
Score = 80.8 bits (170), Expect(3) = 9e-047
Identities = 35/58 (60%), Positives = 42/58 (72%)
Frame = -3 / -3
Query: 287 GGAPIFPSTSSERISGTCHILASTPSTDKAPFLISSASLPTCPYME*YTT*ILTAIGE 114
G A IFPSTSS +S T H + STP T+ AP ISSAS+ TCP++E*YT *IL AI +
Sbjct: 241 GAACIFPSTSSASVSATRHTVTSTPGTESAPLFISSASVATCPHVE*YTM*ILVAIAD 68
Score = 55.1 bits (114), Expect(3) = 9e-047
Identities = 23/34 (67%), Positives = 25/34 (73%)
Frame = -3 / -3
Query: 608 GLPPWTWSMPNSLAPKV*PTGTNTMPWCVSWVIA 507
GLPP+T S N AP V*PTGT +MPWCVS V A
Sbjct: 565 GLPPFTLSTANMPAPCV*PTGTKSMPWCVSCVTA 464
>gb|BM371440.2|BM371440 EBma08_SQ002_L23_R maternal, 28 DPA, no treatment, cv Optic, EBma08
Hordeum vulgare subsp. vulgare cDNA clone
EBma08_SQ002_L23 5', mRNA sequence
Length = 563
Score = 261 bits (565), Expect = 4e-069
Identities = 107/129 (82%), Positives = 112/129 (86%)
Frame = +1 / +2
Query: 346 FGFPTRFGMMAAQMKAFFDATGGLWREQSLAGKPAGMFFSXXXXXXXXXXXPLTAITQLT 525
FGFPTRFGMMAAQMKAFFDATGGLWREQSLAGKPAG+FFS LT +TQLT
Sbjct: 2 FGFPTRFGMMAAQMKAFFDATGGLWREQSLAGKPAGIFFSTGTQGGGQETTALTTVTQLT 181
Query: 526 HHGMVFVPVGYTFGAKLFGMDQVQGGSPYGAGTFAADGSRWPSEVELEHAFHQGKYFAGI 705
HHGMVFVPVGYTF AKLF MD+VQGGSPYGA TFAADGSRWPSE+ELEHAFH G+YFAGI
Sbjct: 182 HHGMVFVPVGYTFVAKLFDMDKVQGGSPYGASTFAADGSRWPSEMELEHAFHHGQYFAGI 361
Query: 706 AKKLKGSA* 732
AKKLKGSA*
Sbjct: 362 AKKLKGSA* 388
Score = 129 bits (276), Expect(3) = 2e-047
Identities = 55/71 (77%), Positives = 58/71 (81%)
Frame = -3 / -3
Query: 731 QAEPLSFLAMPAKYFPWWKACSSSTSLGHLDPSAANVPAP*GLPPWTWSMPNSLAPKV*P 552
QA+PLSF AMPAKY PWWKACSSS S GHL+PSAANV AP GLPP T SM NSLA KV P
Sbjct: 387 QADPLSFFAMPAKY*PWWKACSSSISDGHLEPSAANVLAPYGLPP*TLSMSNSLATKVYP 208
Query: 551 TGTNTMPWCVS 519
TGT TMPW V+
Sbjct: 207 TGTKTMPW*VN 175
Score = 127 bits (273), Expect(2) = 3e-034
Identities = 48/89 (53%), Positives = 61/89 (68%)
Frame = +3 / +1
Query: 345 LWVSDKVRNDGSSDEGVLRCHRWALEGAEPRWQACRHVLQHWNPGWWPRDYTADGDYPAD 524
LW S KV +DG ++EG+L C+RW +EGAE QAC ++LQHW GWW DY+ D D
Sbjct: 1 LWFSYKVWHDGCANEGIL*CNRWPVEGAESCRQACGYLLQHWYSGWWAGDYSIDNSNSVD 180
Query: 525 APRHGVCARGLHLRRQAVRHGPGPGWQPL 611
+PRHG +R +HLR QAVRHG WQP+
Sbjct: 181 SPRHGFRSRRVHLRCQAVRHGQSSRWQPV 267
Score = 79.0 bits (166), Expect(3) = 2e-033
Identities = 33/40 (82%), Positives = 35/40 (87%)
Frame = -3 / -3
Query: 464 LKNMPAGLPARLCSLQSPPVASKNAFI*AAIIPNLVGNPK 345
LK +PAGLPARLCSL PPVASKNAFI AAI+PNLVG PK
Sbjct: 120 LKKIPAGLPARLCSLHRPPVASKNAFICAAIMPNLVGKPK 1
Score = 79.0 bits (166), Expect(3) = 2e-047
Identities = 35/59 (59%), Positives = 41/59 (69%)
Frame = -2 / -2
Query: 522 QLGNRRQRCSLLATTLGSSAEEHAGRLASEALLPPEPTGGIEERLHLSCHHSEPCRKPK 346
QL Q CSLL TTL +SAEE RLA + LLPP+ TG I+E LHL HH++PCRK K
Sbjct: 178 QLSYCCQCCSLLPTTLSTSAEEDTRRLACKTLLPPQATGCIKECLHLRSHHAKPCRKTK 2
Score = 64.8 bits (135), Expect(3) = 2e-033
Identities = 30/55 (54%), Positives = 35/55 (63%)
Frame = -2 / -2
Query: 735 RSSRALELLGDAREVFPLVEGVLQLHLARPPRPXXXXXXXXXXXATLDLVHAEQL 571
RSSR+LE L DARE+ +VEG+LQLHL PPR ATL+ VH EQL
Sbjct: 391 RSSRSLEFLRDAREILTMVEGMLQLHLRWPPRTIGGKCACAVRAATLNFVHVEQL 227
Score = 37.7 bits (76), Expect(2) = 3e-034
Identities = 12/19 (63%), Positives = 15/19 (78%)
Frame = +3 / +1
Query: 675 LPPGEILRGHRQEAQGLCL 731
LPP + RGHR+E QG+CL
Sbjct: 331 LPPWSVFRGHREETQGICL 387
Score = 36.8 bits (74), Expect(3) = 2e-033
Identities = 13/36 (36%), Positives = 17/36 (47%)
Frame = -1 / -1
Query: 577 TAWRRRCSPRAQTPCRXXXXXXXXXXXXXXGHHPGF 470
TAW+RRC+ R + PCR HHP +
Sbjct: 233 TAWQRRCTRRERKPCRGESTELLLSML*SPAHHPEY 126
Score = 23.1 bits (44), Expect(3) = 2e-047
Identities = 11/22 (50%), Positives = 12/22 (54%)
Frame = -3 / -1
Query: 959 FFFFLT*PNHRNLCGRNNDSPT 894
FFFFLT P+ R N S T
Sbjct: 563 FFFFLTNPSKHIYHARPNRSST 498
>gb|BQ756652.1|BQ756652 EBem09_SQ003_F19_R embryo, 1 Day germination, no treatment, cv
Optic, EBem09 Hordeum vulgare subsp. vulgare cDNA clone
EBem09_SQ003_F19 5', mRNA sequence
Length = 433
Score = 261 bits (565), Expect = 4e-069
Identities = 109/131 (83%), Positives = 114/131 (87%)
Frame = +1 / +1
Query: 73 PHLPLWSGHRSSETSPMAVKIYVVYYSMYGHVGKLADEIKKGALSVEGVEAKIWQVPEIL 252
P + S S SPMAVK+YVVYYSMYGHV KLADEIKKG SVEGVEAKIWQVPE L
Sbjct: 10 PSCQISSPRSSEAASPMAVKVYVVYYSMYGHVAKLADEIKKGVSSVEGVEAKIWQVPETL 189
Query: 253 SEEVLGKMGAPPKPDVPVITPQELAEADGILFGFPTRFGMMAAQMKAFFDATGGLWREQS 432
EEVLGKMGAPPK D P+ITPQELA+ADGILFGFPTRFGMMAAQMKAFFDATGGLWREQS
Sbjct: 190 PEEVLGKMGAPPKLDAPIITPQELADADGILFGFPTRFGMMAAQMKAFFDATGGLWREQS 369
Query: 433 LAGKPAGMFFS 465
LAGKPAG+FFS
Sbjct: 370 LAGKPAGIFFS 402
Score = 233 bits (503), Expect = 1e-060
Identities = 101/122 (82%), Positives = 106/122 (86%)
Frame = -3 / -3
Query: 464 LKNMPAGLPARLCSLQSPPVASKNAFI*AAIIPNLVGNPKRIPSASASSCGVMTGTSGLG 285
LK +PAGLPARLCSL PPVASKNAFI AAI+PNLVG PKRIPSASASSCGVM G S LG
Sbjct: 401 LKKIPAGLPARLCSLHRPPVASKNAFICAAIMPNLVGKPKRIPSASASSCGVMIGASSLG 222
Query: 284 GAPIFPSTSSERISGTCHILASTPSTDKAPFLISSASLPTCPYME*YTT*ILTAIGEVSE 105
GAPIFPSTSS R+SGTCHILASTPSTD PFLISSASL TCPYME*YTT* LTAIG+ +
Sbjct: 221 GAPIFPSTSSGRVSGTCHILASTPSTDDTPFLISSASLATCPYME*YTT*TLTAIGDAAS 42
Query: 104 LL 99
L
Sbjct: 41 EL 36
Score = 197 bits (425), Expect = 7e-050
Identities = 79/127 (62%), Positives = 99/127 (77%)
Frame = -2 / -2
Query: 495 SLLATTLGSSAEEHAGRLASEALLPPEPTGGIEERLHLSCHHSEPCRKPKEDTVSLCKFL 316
SL+ TTL +SAEE RLA + LLPP+ TG I+E LHL HH++PCRK KED + + KFL
Sbjct: 432 SLVPTTLSTSAEEDTRRLACKTLLPPQATGCIKECLHLRSHHAKPCRKTKEDPICVRKFL 253
Query: 315 RCDDWHVGLRGRAHLSKHFFRENFRDLPYLSLNTFNR*GTFLDLVS*FANMPIHGIVHNV 136
CDDW + LR R HLSK+F RE+FRDLPY S +TFN * FLDL+S*F++M IHG+VH++
Sbjct: 252 WCDDWGIKLRRRTHLSKYFLRESFRDLPYFSFDTFN**HAFLDLIS*FSDMSIHGVVHDI 73
Query: 135 DLNRHWR 115
DL+RHWR
Sbjct: 72 DLDRHWR 52
Score = 161 bits (346), Expect = 6e-039
Identities = 76/141 (53%), Positives = 89/141 (63%)
Frame = +3 / +3
Query: 72 PASPSLVWSQELRDLSNGG*DLRCVLFHVWACWQTS*RDQERCLIC*RC*G*DMAGP*NS 251
P P L + +SNGG L VL HVW C TS* DQER +I *RC *+MAGP*NS
Sbjct: 9 PQLPDLQPEELRSSISNGGQGLCRVLLHVWTCR*TS**DQERRVIS*RCRS*NMAGP*NS 188
Query: 252 L*RSAWKDGRAP*ARRASHHTAGTCRG*RYPLWVSDKVRNDGSSDEGVLRCHRWALEGAE 431
S WKDG A *A +HHT TC PLW S KV +DG ++EG+L C+RW +EGAE
Sbjct: 189 PGGSTWKDGCAS*A*CPNHHTTRTCGRRWDPLWFSYKVWHDGCANEGIL*CNRWPVEGAE 368
Query: 432 PRWQACRHVLQHWNPGWWPRD 494
QAC ++LQHW GWW RD
Sbjct: 369 SCRQACGYLLQHWYSGWWARD 431
Score = 120 bits (256), Expect = 1e-026
Identities = 58/99 (58%), Positives = 65/99 (65%)
Frame = +2 / +2
Query: 116 LQWRLRSTLCTIPCMGMLAN*LTRSRKVPYLLKVLRLRYGRSLKFSLKKCLERWARPLSP 295
LQWR RS CT PCM M N*L RSRK + LKV +L+YGRSLK S +K LERW R LS
Sbjct: 53 LQWRSRSMSCTTPCMDMSLN*LMRSRKACHQLKVSKLKYGRSLKLSRRKYLERWVRLLSL 232
Query: 296 TCQSSHRRNLQRLTVSSLGFRQGSE*WQLR*RRSSMPPV 412
QSSH +NL+ SSL F QG *W +*R S M PV
Sbjct: 233 MPQSSHHKNLRTQMGSSLVFLQGLA*WLRK*RHSLMQPV 349
Score = 110 bits (234), Expect = 2e-023
Identities = 56/97 (57%), Positives = 64/97 (65%)
Frame = -1 / -1
Query: 430 SAPSRAHRWHRRTPSSELPSFRTLSETQRGYRQPLQVPAV**LARRA*GARPSFQALLQR 251
SAPS HR H+R PS PS +TL E QRG QV V**L +A* A PSFQ L
Sbjct: 367 SAPSTGHRLHQRMPSFAQPSCQTL*ENQRGSHLRPQVLVV**LGHQA*EAHPSFQVLPPG 188
Query: 250 EFQGPAIS*PQHLQQIRHLS*SRQLVCQHAHTWNSTQ 140
EFQGPAI * +HLQ + LS*S QLV +H HTW+ST+
Sbjct: 187 EFQGPAIF*LRHLQLMTRLS*SHQLV*RHVHTWSSTR 77
>gb|BM377955.2|BM377955 EBem04_SQ004_L07_R embryo, 12 DPA, no treatment, cv Optic, EBem04
Hordeum vulgare subsp. vulgare cDNA clone
EBem04_SQ004_L07 5', mRNA sequence
Length = 534
Score = 165 bits (354), Expect(2) = 8e-068
Identities = 67/107 (62%), Positives = 77/107 (71%)
Frame = +1 / +3
Query: 283 PPKPDVPVITPQELAEADGILFGFPTRFGMMAAQMKAFFDATGGLWREQSLAGKPAGMFF 462
P + DVPVI+P ELA+ADG++FGFPTRFGMM Q KAF D T LW Q LAGKPA +FF
Sbjct: 213 PKRDDVPVISPAELADADGLIFGFPTRFGMMPMQFKAFMDGTSELWCPQRLAGKPAALFF 392
Query: 463 SXXXXXXXXXXXPLTAITQLTHHGMVFVPVGYTFGAKLFGMDQVQGG 603
S LTAITQL HHGM+FVPVGYTFG+ +F M QV+GG
Sbjct: 393 SSGCQGGGQETTALTAITQLVHHGMLFVPVGYTFGSSMFEMGQVKGG 533
Score = 112 bits (240), Expect(2) = 8e-068
Identities = 45/59 (76%), Positives = 49/59 (83%)
Frame = +1 / +3
Query: 121 MAVKIYVVYYSMYGHVGKLADEIKKGALSVEGVEAKIWQVPEILSEEVLGKMGAPPKPD 297
MA KIY+VYYS YGHV KLADEI+KG SVEGVE K+WQVPE LS+E L KMGAPPK D
Sbjct: 48 MAAKIYIVYYSTYGHVAKLADEIQKGVSSVEGVEVKLWQVPETLSDEALAKMGAPPKRD 224
Score = 73.9 bits (155), Expect(3) = 9e-036
Identities = 37/60 (61%), Positives = 38/60 (63%)
Frame = -3 / -3
Query: 461 KNMPAGLPARLCSLQSPPVASKNAFI*AAIIPNLVGNPKRIPSASASSCGVMTGTSGLGG 282
KN AGLPA C S V S NA I+PNLVGNPK PSASASS G MTGTS L G
Sbjct: 391 KNNAAGLPASRCGHHSSLVPSMNALNCMGIMPNLVGNPKIRPSASASSAGEMTGTSSLFG 212
Score = 67.5 bits (141), Expect(3) = 9e-036
Identities = 30/63 (47%), Positives = 40/63 (63%)
Frame = -2 / -2
Query: 309 DDWHVGLRGRAHLSKHFFRENFRDLPYLSLNTFNR*GTFLDLVS*FANMPIHGIVHNVDL 130
D + + LR HL + F RE+ RDLP L L+ F+R L+L+ * +M I G+VHNVDL
Sbjct: 236 DRYVIPLRWSTHLCECFVRESLRDLP*LDLHAFDRRHALLNLIC*LGHMTIGGVVHNVDL 57
Query: 129 NRH 121
RH
Sbjct: 56 GRH 48
Score = 67.5 bits (141), Expect(2) = 4e-023
Identities = 38/102 (37%), Positives = 50/102 (49%)
Frame = +3 / +2
Query: 297 RASHHTAGTCRG*RYPLWVSDKVRNDGSSDEGVLRCHRWALEGAEPRWQACRHVLQHWNP 476
R H T R R L V +R+D + +GV H A+ A R QA VL W P
Sbjct: 227 RTGHLTGRARRRRRPNLRVPH*IRHDAHAVQGVHGRH**AVVPAAARRQARCIVLLLWLP 406
Query: 477 GWWPRDYTADGDYPADAPRHGVCARGLHLRRQAVRHGPGPGW 602
G WPR++ DG Y A AP H +C+ +H+ + V G GW
Sbjct: 407 GRWPRNHCVDGHYSAGAPWHALCSCRVHVWLKHV*DGASEGW 532
Score = 60.6 bits (126), Expect(2) = 4e-023
Identities = 31/55 (56%), Positives = 35/55 (63%)
Frame = +3 / +2
Query: 114 LSNGG*DLRCVLFHVWACWQTS*RDQERCLIC*RC*G*DMAGP*NSL*RSAWKDG 278
LSNGG DL CVL H+W+C Q S D E + R G MAGP +SL*RS KDG
Sbjct: 41 LSNGGQDLHCVLLHLWSCGQASR*DSEGRVFGRRRGGQVMAGPGDSL*RSTRKDG 205
Score = 47.3 bits (97), Expect(3) = 9e-036
Identities = 18/32 (56%), Positives = 22/32 (68%)
Frame = -3 / -3
Query: 602 PPWTWSMPNSLAPKV*PTGTNTMPWCVSWVIA 507
PP+T + N L P V PTGT +MPWC S V+A
Sbjct: 532 PPFTCPISNMLEPNVYPTGTKSMPWCTS*VMA 437
>gb|AL503647.1|AL503647 AL503647 Hordeum vulgare Barke roots Hordeum vulgare subsp. vulgare
cDNA clone HW02O22T 5', mRNA sequence
Length = 700
Score = 116 bits (248), Expect(4) = 1e-065
Identities = 47/58 (81%), Positives = 52/58 (89%)
Frame = +1 / +1
Query: 280 APPKPDVPVITPQELAEADGILFGFPTRFGMMAAQMKAFFDATGGLWREQSLAGKPAG 453
AP + D PVIT +LAEADGILFGFPTRFGMMAAQMKAFFD+TGGLW+ QSL+GKPAG
Sbjct: 220 APGREDHPVITASQLAEADGILFGFPTRFGMMAAQMKAFFDSTGGLWQAQSLSGKPAG 393
Score = 99.1 bits (210), Expect(3) = 4e-032
Identities = 39/70 (55%), Positives = 48/70 (68%)
Frame = +1 / +2
Query: 421 REQSLAGKPAGMFFSXXXXXXXXXXXPLTAITQLTHHGMVFVPVGYTFGAKLFGMDQVQG 600
R ++ P +FF+ LTA+TQLTHHGM+FVPVGYT GA +F MD+V+G
Sbjct: 362 RRRASRESPRAVFFATGTQGGGQETTALTAVTQLTHHGMLFVPVGYTHGAGMFAMDEVKG 541
Query: 601 GSPYGAGTFA 630
GSPYGAGTFA
Sbjct: 542 GSPYGAGTFA 571
Score = 92.3 bits (195), Expect(4) = 1e-065
Identities = 39/58 (67%), Positives = 44/58 (75%)
Frame = +1 / +1
Query: 115 SPMAVKIYVVYYSMYGHVGKLADEIKKGALSVEGVEAKIWQVPEILSEEVLGKMGAPP 288
S MA KIY+ YYS +GHV LA+E+KKGA SV GVE IW+VPE L EEVLGKM A P
Sbjct: 52 SAMATKIYIXYYSTWGHVATLAEEMKKGADSVPGVEVTIWRVPETLPEEVLGKMHAAP 225
Score = 83.5 bits (176), Expect(4) = 5e-055
Identities = 37/61 (60%), Positives = 42/61 (68%)
Frame = -3 / -3
Query: 461 KNMPAGLPARLCSLQSPPVASKNAFI*AAIIPNLVGNPKRIPSASASSCGVMTGTSGLGG 282
+ PAG P RLC+ Q PPV SK AFI AAI+PN VG P R+PSASAS V+TG S G
Sbjct: 401 RRRPAGFPERLCACQRPPVESKKAFICAAIMPNRVGKPNRMPSASASWLAVITGWSSRPG 222
Query: 281 A 279
A
Sbjct: 221 A 219
Score = 79.4 bits (167), Expect(4) = 5e-055
Identities = 35/58 (60%), Positives = 42/58 (72%)
Frame = -3 / -3
Query: 287 GGAPIFPSTSSERISGTCHILASTPSTDKAPFLISSASLPTCPYME*YTT*ILTAIGE 114
G A IFPSTSS +SGT ++ STP T+ APF ISSAS+ TCP +E*Y *IL AI +
Sbjct: 224 GAACIFPSTSSGSVSGTRQMVTSTPGTESAPFFISSASVATCPQVE*YXM*ILVAIAD 51
Score = 66.6 bits (139), Expect(4) = 5e-055
Identities = 30/46 (65%), Positives = 32/46 (69%)
Frame = -3 / -2
Query: 644 LDPSAANVPAP*GLPPWTWSMPNSLAPKV*PTGTNTMPWCVSWVIA 507
L + A VPAP GLPP T SM N AP V PTGTN+MP CVSWV A
Sbjct: 585 LPSAPAKVPAPYGLPPLTSSMANMPAPCVYPTGTNSMP*CVSWVTA 448
Score = 55.6 bits (115), Expect(4) = 1e-065
Identities = 25/52 (48%), Positives = 32/52 (61%)
Frame = +3 / +1
Query: 456 VLQHWNPGWWPRDYTADGDYPADAPRHGVCARGLHLRRQAVRHGPGPGWQPL 611
+L+H +PG D+ G PADA RH V A +H RR+ VRHG G G QP+
Sbjct: 397 LLRHGHPGRRAGDHGPHGRDPADASRHAVRAGRVHARRRHVRHGRGQGRQPV 552
Score = 54.7 bits (113), Expect(3) = 4e-032
Identities = 23/40 (57%), Positives = 30/40 (75%)
Frame = +3 / +3
Query: 327 RG*RYPLWVSDKVRNDGSSDEGVLRCHRWALEGAEPRWQA 446
RG R+P+ +SD VR+DG +DEG+LR HR L GAEP +A
Sbjct: 267 RGRRHPVRLSDAVRHDGGADEGLLRLHRRPLAGAEPLGKA 386
Score = 43.2 bits (88), Expect(4) = 1e-065
Identities = 18/24 (75%), Positives = 19/24 (79%)
Frame = +1 / +1
Query: 649 PSEVELEHAFHQGKYFAGIAKKLK 720
PS+ L A HQGKYFAGIAKKLK
Sbjct: 595 PSDAXLALAAHQGKYFAGIAKKLK 666
Score = 42.3 bits (86), Expect(4) = 5e-055
Identities = 17/25 (68%), Positives = 19/25 (76%)
Frame = -3 / -3
Query: 719 LSFLAMPAKYFPWWKACSSSTSLGH 645
LSFLAMPAKY PW A +S SLG+
Sbjct: 665 LSFLAMPAKYLPWCAARASXASLGN 591
Score = 22.6 bits (43), Expect(3) = 4e-032
Identities = 9/15 (60%), Positives = 11/15 (73%)
Frame = +3 / +3
Query: 681 PGEILRGHRQEAQGL 725
PG++L H QEAQ L
Sbjct: 627 PGQVLCRHCQEAQKL 671
>gb|BG300671.1|BG300671 HVSMEb0017O17f Hordeum vulgare seedling shoot EST library
HVcDNA0002 (Dehydration stress) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEb0017O17f, mRNA sequence
Length = 955
Score = 244 bits (528), Expect(2) = 2e-064
Identities = 101/122 (82%), Positives = 109/122 (89%)
Frame = +1 / +2
Query: 91 SGHRSSETSPMAVKIYVVYYSMYGHVGKLADEIKKGALSVEGVEAKIWQVPEILSEEVLG 270
S RSS PMAVK+Y+VYYSMYGHV KLADEIKKGA SVEGVE K+WQVPEIL+EEVLG
Sbjct: 65 SDPRSSHAPPMAVKVYIVYYSMYGHVAKLADEIKKGASSVEGVEVKVWQVPEILNEEVLG 244
Query: 271 KMGAPPKPDVPVITPQELAEADGILFGFPTRFGMMAAQMKAFFDATGGLWREQSLAGKPA 450
KMGAPPK DVPVI+PQELAEADG+LF FPTRFGMMAA MKAFF+AT GLW EQSLAGKPA
Sbjct: 245 KMGAPPKTDVPVISPQELAEADGVLFRFPTRFGMMAAHMKAFFNATVGLWMEQSLAGKPA 424
Query: 451 GM 456
G+
Sbjct: 425 GV 430
Score = 192 bits (413), Expect = 3e-048
Identities = 88/120 (73%), Positives = 97/120 (80%)
Frame = -3 / -2
Query: 461 KNMPAGLPARLCSLQSPPVASKNAFI*AAIIPNLVGNPKRIPSASASSCGVMTGTSGLGG 282
++ PAGLPARLCS+ SP VA KNAF+ AAI+PNLVGN R PSASASS G +TGTS LGG
Sbjct: 435 RDTPAGLPARLCSIHSPTVALKNAFMCAAIMPNLVGNRNRTPSASASS*GEITGTSVLGG 256
Query: 281 APIFPSTSSERISGTCHILASTPSTDKAPFLISSASLPTCPYME*YTT*ILTAIGEVSEL 102
API P TSS RISGTCH L STPST++APFLISSASL T PYME*YT * LTA+G EL
Sbjct: 255 APILPRTSSFRISGTCHTLTSTPSTEEAPFLISSASLAT*PYME*YTM*TLTAMGGAWEL 76
Score = 160 bits (343), Expect = 1e-038
Identities = 64/121 (52%), Positives = 87/121 (71%)
Frame = -2 / -1
Query: 462 EEHAGRLASEALLPPEPTGGIEERLHLSCHHSEPCRKPKEDTVSLCKFLRCDDWHVGLRG 283
+ HA R A +ALL P+P +EERLH+ HH++PC +P++D V L + LR D HVGL
Sbjct: 436 KRHARRFAGQALLHPQPDSSVEERLHVRRHHAKPCWEPEQDAVGLRQLLRGDHRHVGLGW 257
Query: 282 RAHLSKHFFRENFRDLPYLSLNTFNR*GTFLDLVS*FANMPIHGIVHNVDLNRHWRGLGA 103
HL+K F ++ RDLP+ +L+ FNR TFLDL+S* +NM IHG+VH+VDL+RH R +GA
Sbjct: 256 GTHLAKDFLVQDLRDLPHFNLHAFNRGSTFLDLIS*LSNMTIHGVVHDVDLDRHGRRVGA 77
Query: 102 P 100
P
Sbjct: 76 P 74
Score = 106 bits (227), Expect = 1e-022
Identities = 53/102 (51%), Positives = 64/102 (62%)
Frame = +2 / +3
Query: 95 VTGAPRPLQWRLRSTLCTIPCMGMLAN*LTRSRKVPYLLKVLRLRYGRSLKFSLKKCLER 274
+ GAP L WR RST CT PCM ML +*L RSRKV LLK RL+ G+SL+ +K L R
Sbjct: 69 IRGAPTRLPWRSRSTSCTTPCMVMLLS*LMRSRKVLPLLKAWRLKCGKSLRS*TRKSLAR 248
Query: 275 WARPLSPTCQSSHRRNLQRLTVSSLGFRQGSE*WQLR*RRSS 400
W PTC+ S R+ +R T S G +QG *W+ *RRSS
Sbjct: 249 WVPHPRPTCR*SPLRSWRRPTASCSGSQQGLA*WRRT*RRSS 374
Score = 22.1 bits (42), Expect(2) = 2e-064
Identities = 7/11 (63%), Positives = 8/11 (72%)
Frame = +1 / +2
Query: 541 FVPVGYTFGAK 573
+ PVGYTF K
Sbjct: 521 YFPVGYTFSTK 553
>gb|BI780970.2|BI780970 EBma03_SQ001_A07_R maternal, 8 DPA, no treatment, cv Optic, EBma03
Hordeum vulgare subsp. vulgare cDNA clone
EBma03_SQ001_A07 5', mRNA sequence
Length = 394
Score = 239 bits (516), Expect = 2e-062
Identities = 98/112 (87%), Positives = 103/112 (91%)
Frame = +1 / +1
Query: 91 SGHRSSETSPMAVKIYVVYYSMYGHVGKLADEIKKGALSVEGVEAKIWQVPEILSEEVLG 270
S RSS PMAVK+YVVYYSMYGHV KLADEIKKGA SVEGVE K+WQVPEIL+EEVLG
Sbjct: 58 SDPRSSHAPPMAVKVYVVYYSMYGHVAKLADEIKKGASSVEGVEVKVWQVPEILNEEVLG 237
Query: 271 KMGAPPKPDVPVITPQELAEADGILFGFPTRFGMMAAQMKAFFDATGGLWRE 426
KMGAPPK DVPVI+PQELAEADG+LFGFPTRFGMMAAQMKAFFDATGGLWRE
Sbjct: 238 KMGAPPKTDVPVISPQELAEADGVLFGFPTRFGMMAAQMKAFFDATGGLWRE 393
Score = 183 bits (395), Expect = 1e-045
Identities = 85/108 (78%), Positives = 90/108 (83%)
Frame = -3 / -3
Query: 425 SLQSPPVASKNAFI*AAIIPNLVGNPKRIPSASASSCGVMTGTSGLGGAPIFPSTSSERI 246
SL SPPVASKNAFI AAI+PNLVGNP R PSASASS G +TGTS LGGAPI P TSS RI
Sbjct: 392 SLHSPPVASKNAFICAAIMPNLVGNPNRTPSASASS*GEITGTSVLGGAPILPRTSSFRI 213
Query: 245 SGTCHILASTPSTDKAPFLISSASLPTCPYME*YTT*ILTAIGEVSEL 102
SGTCH L STPST++APFLISSASL T PYME*YTT* LTA+G EL
Sbjct: 212 SGTCHTLTSTPSTEEAPFLISSASLAT*PYME*YTT*TLTAMGGAWEL 69
Score = 152 bits (326), Expect = 3e-036
Identities = 62/109 (56%), Positives = 81/109 (74%)
Frame = -2 / -2
Query: 426 LPPEPTGGIEERLHLSCHHSEPCRKPKEDTVSLCKFLRCDDWHVGLRGRAHLSKHFFREN 247
LPP+P +EERLHL HH+EP R+P++D V L + LR D HVGL AHL+K F ++
Sbjct: 393 LPPQPARRVEERLHLRRHHAEPRREPEQDAVGLRQLLRGDHRHVGLGRGAHLAKDFLVQD 214
Query: 246 FRDLPYLSLNTFNR*GTFLDLVS*FANMPIHGIVHNVDLNRHWRGLGAP 100
RDLP+ +L+ FNR TFLDL+S* +NM IHG+VH+VDL+RH R +GAP
Sbjct: 213 LRDLPHFNLHAFNRGSTFLDLIS*LSNMTIHGVVHDVDLDRHGRRVGAP 67
Score = 115 bits (245), Expect = 5e-025
Identities = 57/102 (55%), Positives = 67/102 (65%)
Frame = +2 / +2
Query: 95 VTGAPRPLQWRLRSTLCTIPCMGMLAN*LTRSRKVPYLLKVLRLRYGRSLKFSLKKCLER 274
+ GAP L WR RST CT PCM ML +*L RSRKV LLK RL+ GRSL+ +K L R
Sbjct: 62 IRGAPTRLPWRSRSTSCTTPCMVMLLS*LMRSRKVLPLLKAWRLKCGRSLRS*TRKSLAR 241
Query: 275 WARPLSPTCQSSHRRNLQRLTVSSLGFRQGSE*WQLR*RRSS 400
WA PTC+ S R+ +R T S G R+GS *W+ R*RRSS
Sbjct: 242 WAPLPRPTCR*SPLRSWRRPTASCSGSRRGSA*WRRR*RRSS 367
Score = 109 bits (233), Expect = 2e-023
Identities = 57/110 (51%), Positives = 69/110 (62%)
Frame = +3 / +3
Query: 96 SQELRDLSNGG*DLRCVLFHVWACWQTS*RDQERCLIC*RC*G*DMAGP*NSL*RSAWKD 275
S EL S+GG LR VL HVW+C S* DQERC +C*R G* +AGP*+ S W+D
Sbjct: 63 SAELPRASHGGQGLRRVLLHVWSCC*AS**DQERCFLC*RRGG*SVAGP*DPERGSPWQD 242
Query: 276 GRAP*ARRASHHTAGTCRG*RYPLWVSDKVRNDGSSDEGVLRCHRWALEG 425
GR RRA +G G R P+ V D+VR+DG +DEGVLR A+EG
Sbjct: 243 GRPSQDRRAGDLPSGAGGGRRRPVRVPDEVRHDGGADEGVLRRDGRAVEG 392
>gb|BF266201.2|BF266201 HV_CEa0014H09f Hordeum vulgare seedling green leaf EST library
HVcDNA0004 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEa0014H09f, mRNA sequence
Length = 537
Score = 167 bits (360), Expect(2) = 2e-061
Identities = 69/106 (65%), Positives = 81/106 (76%)
Frame = +1 / +3
Query: 280 APPKPDVPVITPQELAEADGILFGFPTRFGMMAAQMKAFFDATGGLWREQSLAGKPAGMF 459
AP + D PVIT ++LA+ADGILFGFPTRFGMM AQMKAFFD+TGGLW++QSLAGKPA +F
Sbjct: 219 APGREDHPVITARQLAKADGILFGFPTRFGMMTAQMKAFFDSTGGLWQQQSLAGKPAAVF 398
Query: 460 FSXXXXXXXXXXXPLTAITQLTHHGMVFVPVGYTFGAKLFGMDQVQ 597
F+ LTA+TQLTHHGM+FVPV YT GA +F Q Q
Sbjct: 399 FATGTQGGGQETTALTAVTQLTHHGMLFVPVRYTHGAGMFDNGQSQ 536
Score = 89.0 bits (188), Expect(2) = 2e-061
Identities = 39/66 (59%), Positives = 45/66 (68%)
Frame = +1 / +3
Query: 91 SGHRSSETSPMAVKIYVVYYSMYGHVGKLADEIKKGALSVEGVEAKIWQVPEILSEEVLG 270
S ++ MA KIY+VYYS GHV LA+EIKKGA SV VE IW+VPE L E+VLG
Sbjct: 27 SNQGDHNSTAMATKIYIVYYSTCGHVATLAEEIKKGAGSVPDVEVTIWRVPETLPEDVLG 206
Query: 271 KMGAPP 288
KM A P
Sbjct: 207 KMHAAP 224
Score = 79.0 bits (166), Expect(3) = 1e-037
Identities = 37/61 (60%), Positives = 39/61 (63%)
Frame = -3 / -3
Query: 461 KNMPAGLPARLCSLQSPPVASKNAFI*AAIIPNLVGNPKRIPSASASSCGVMTGTSGLGG 282
K AGLPAR C Q PPV SK AFI A I+PN VG P R+PSA AS VMTG S G
Sbjct: 400 KKTAAGLPARDCCCQRPPVESKKAFICAVIMPNRVGKPNRMPSALASCLAVMTGWSSRPG 221
Query: 281 A 279
A
Sbjct: 220 A 218
Score = 73.5 bits (154), Expect(3) = 1e-037
Identities = 35/56 (62%), Positives = 41/56 (73%)
Frame = -3 / -3
Query: 287 GGAPIFPSTSSERISGTCHILASTPSTDKAPFLISSASLPTCPYME*YTT*ILTAI 120
G A IFPSTSS +SGT ++ ST T+ APFLISSAS+ TCP +E* T *IL AI
Sbjct: 223 GAACIFPSTSSGSVSGTRQMVTSTSGTEPAPFLISSASVATCPQVE**TM*ILVAI 56
Score = 42.8 bits (87), Expect(3) = 1e-037
Identities = 17/28 (60%), Positives = 19/28 (67%)
Frame = -3 / -3
Query: 590 WSMPNSLAPKV*PTGTNTMPWCVSWVIA 507
W + N AP V TGTN+MPWCVS V A
Sbjct: 529 WPLSNMPAPCVYRTGTNSMPWCVSCVTA 446
>gb|BM369928.2|BM369928 EBro08_SQ002_F21_R root, 3 week, drought-stressed, cv Optic, EBro08
Hordeum vulgare subsp. vulgare cDNA clone
EBro08_SQ002_F21 5', mRNA sequence
Length = 491
Score = 159 bits (341), Expect(2) = 4e-059
Identities = 64/91 (70%), Positives = 73/91 (80%)
Frame = +1 / +2
Query: 280 APPKPDVPVITPQELAEADGILFGFPTRFGMMAAQMKAFFDATGGLWREQSLAGKPAGMF 459
AP + D PVIT Q+LAEADG+LFGFPTRFGMMAAQMKAFFD+TGGLW+ QSLAGKPAG+F
Sbjct: 218 APGREDHPVITAQQLAEADGVLFGFPTRFGMMAAQMKAFFDSTGGLWQAQSLAGKPAGVF 397
Query: 460 FSXXXXXXXXXXXPLTAITQLTHHGMVFVPV 552
F+ LT +TQLTHHGM+FVPV
Sbjct: 398 FATGTQGGGQETTALTGVTQLTHHGMLFVPV 490
Score = 90.0 bits (190), Expect(3) = 3e-039
Identities = 40/61 (65%), Positives = 43/61 (70%)
Frame = -3 / -3
Query: 461 KNMPAGLPARLCSLQSPPVASKNAFI*AAIIPNLVGNPKRIPSASASSCGVMTGTSGLGG 282
K PAGLPAR C+ Q PPV SK AFI AAI+PN VG P R PSASAS C V+TG S G
Sbjct: 399 KKTPAGLPARDCACQRPPVESKKAFICAAIMPNRVGKPNRTPSASASCCAVITGWSSRPG 220
Query: 281 A 279
A
Sbjct: 219 A 217
Score = 90.0 bits (190), Expect(2) = 4e-059
Identities = 37/58 (63%), Positives = 45/58 (77%)
Frame = +1 / +2
Query: 115 SPMAVKIYVVYYSMYGHVGKLADEIKKGALSVEGVEAKIWQVPEILSEEVLGKMGAPP 288
S MA KIY+VYYS +GHV LA+E+K+GA SV GVE +W+V E L+EEVLGKM A P
Sbjct: 50 SAMATKIYIVYYSTWGHVATLAEEMKRGADSVPGVEVTVWRVAETLAEEVLGKMHAAP 223
Score = 80.8 bits (170), Expect(3) = 3e-039
Identities = 35/58 (60%), Positives = 42/58 (72%)
Frame = -3 / -3
Query: 287 GGAPIFPSTSSERISGTCHILASTPSTDKAPFLISSASLPTCPYME*YTT*ILTAIGE 114
G A IFPSTSS +S T H + STP T+ AP ISSAS+ TCP++E*YT *IL AI +
Sbjct: 222 GAACIFPSTSSASVSATRHTVTSTPGTESAPLFISSASVATCPHVE*YTM*ILVAIAD 49
Score = 29.9 bits (59), Expect(3) = 3e-039
Identities = 10/13 (76%), Positives = 11/13 (84%)
Frame = -3 / -3
Query: 551 TGTNTMPWCVSWV 513
TGT +MPWCVS V
Sbjct: 489 TGTKSMPWCVSCV 451
>gb|BF622794.2|BF622794 HVSMEa0008O10f Hordeum vulgare seedling shoot EST library
HVcDNA0001 (Cold stress) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEa0008O10f, mRNA sequence
Length = 711
Score = 182 bits (393), Expect(3) = 5e-058
Identities = 75/109 (68%), Positives = 86/109 (78%)
Frame = +1 / +2
Query: 283 PPKPDVPVITPQELAEADGILFGFPTRFGMMAAQMKAFFDATGGLWREQSLAGKPAGMFF 462
P + D PVIT LAEADGILFGFPTRFGMMAAQMKAFFD+TGGLW+ QSL+GKPAG+FF
Sbjct: 218 PGREDHPVITESHLAEADGILFGFPTRFGMMAAQMKAFFDSTGGLWQAQSLSGKPAGVFF 397
Query: 463 SXXXXXXXXXXXPLTAITQLTHHGMVFVPVGYTFGAKLFGMDQVQGGSP 609
+ LTA TQLTHHGM+FVPVGYT GA +F MD+V+GG+P
Sbjct: 398 ATGTQGGGQETTALTAGTQLTHHGMLFVPVGYTPGAGMFAMDEVKGGNP 544
Score = 80.8 bits (170), Expect(4) = 7e-035
Identities = 36/60 (60%), Positives = 40/60 (66%)
Frame = -3 / -1
Query: 461 KNMPAGLPARLCSLQSPPVASKNAFI*AAIIPNLVGNPKRIPSASASSCGVMTGTSGLGG 282
K PAG P RLC+ Q PPV SK AFI AAI+PN VG P R+PSASA V+TG S G
Sbjct: 396 KKTPAGFPERLCACQRPPVESKKAFICAAIMPNRVGKPNRMPSASARWLSVITGWSSRPG 217
Score = 55.1 bits (114), Expect(4) = 7e-035
Identities = 24/34 (70%), Positives = 25/34 (73%)
Frame = -3 / -1
Query: 608 GLPPWTWSMPNSLAPKV*PTGTNTMPWCVSWVIA 507
GLPP T SM N AP V PTGTN+MP CVSWV A
Sbjct: 543 GLPPLTSSMANMPAPGVYPTGTNSMP*CVSWVPA 442
Score = 48.7 bits (100), Expect(3) = 5e-058
Identities = 21/33 (63%), Positives = 23/33 (69%)
Frame = +1 / +2
Query: 190 KKGALSVEGVEAKIWQVPEILSEEVLGKMGAPP 288
+ GA SV GVE IW+VPE L EE LGKM A P
Sbjct: 122 RSGADSVPGVEVTIWRVPETLPEEALGKMHAGP 220
Score = 42.3 bits (86), Expect(4) = 7e-035
Identities = 18/33 (54%), Positives = 22/33 (66%)
Frame = -3 / -1
Query: 287 GGAPIFPSTSSERISGTCHILASTPSTDKAPFL 189
G A IFPS SS +SGT ++ STP T+ AP L
Sbjct: 219 GPACIFPSASSGSVSGTRQMVTSTPGTESAPLL 121
Score = 32.2 bits (64), Expect(3) = 5e-058
Identities = 12/18 (66%), Positives = 14/18 (77%)
Frame = +1 / +3
Query: 115 SPMAVKIYVVYYSMYGHV 168
S MA KIY+V+YS GHV
Sbjct: 45 SAMATKIYIVFYSTCGHV 98
Score = 24.9 bits (48), Expect(4) = 7e-035
Identities = 11/18 (61%), Positives = 13/18 (72%)
Frame = -3 / -3
Query: 167 TCPYME*YTT*ILTAIGE 114
TCP +E* T *IL AI +
Sbjct: 97 TCPQVE*NTM*ILVAIAD 44
>gb|BF260484.1|BF260484 HVSMEf0022C02f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEf0022C02f, mRNA sequence
Length = 851
Score = 148 bits (317), Expect(2) = 3e-057
Identities = 60/87 (68%), Positives = 69/87 (79%)
Frame = +1 / +3
Query: 280 APPKPDVPVITPQELAEADGILFGFPTRFGMMAAQMKAFFDATGGLWREQSLAGKPAGMF 459
AP + D PVIT +LAEADGILFGFPTRFGMMAAQMKAFFD+TGGLW+ QSL+GKPAG+F
Sbjct: 384 APGREDHPVITASQLAEADGILFGFPTRFGMMAAQMKAFFDSTGGLWQAQSLSGKPAGVF 563
Query: 460 FSXXXXXXXXXXXPLTAITQLTHHGMV 540
F+ LTA+TQLTHHGM+
Sbjct: 564 FATGTQGGGQETTALTAVTQLTHHGML 644
Score = 94.5 bits (200), Expect(2) = 3e-057
Identities = 40/58 (68%), Positives = 45/58 (77%)
Frame = +1 / +3
Query: 115 SPMAVKIYVVYYSMYGHVGKLADEIKKGALSVEGVEAKIWQVPEILSEEVLGKMGAPP 288
S MA KIY+VYYS +GHV LA+E+KKGA SV GVE IW+VPE L EEVLGKM A P
Sbjct: 216 SAMATKIYIVYYSTWGHVATLAEEMKKGADSVPGVEVTIWRVPETLPEEVLGKMHAAP 389
Score = 84.9 bits (179), Expect(2) = 1e-034
Identities = 38/61 (62%), Positives = 42/61 (68%)
Frame = -3 / -2
Query: 461 KNMPAGLPARLCSLQSPPVASKNAFI*AAIIPNLVGNPKRIPSASASSCGVMTGTSGLGG 282
K PAG P RLC+ Q PPV SK AFI AAI+PN VG P R+PSASAS V+TG S G
Sbjct: 565 KKTPAGFPERLCACQRPPVESKKAFICAAIMPNRVGKPNRMPSASASWLAVITGWSSRPG 386
Query: 281 A 279
A
Sbjct: 385 A 383
Score = 81.7 bits (172), Expect(2) = 1e-034
Identities = 36/58 (62%), Positives = 43/58 (74%)
Frame = -3 / -2
Query: 287 GGAPIFPSTSSERISGTCHILASTPSTDKAPFLISSASLPTCPYME*YTT*ILTAIGE 114
G A IFPSTSS +SGT ++ STP T+ APF ISSAS+ TCP +E*YT *IL AI +
Sbjct: 388 GAACIFPSTSSGSVSGTRQMVTSTPGTESAPFFISSASVATCPQVE*YTM*ILVAIAD 215
>gb|BF622781.2|BF622781 HVSMEa0008M06f Hordeum vulgare seedling shoot EST library
HVcDNA0001 (Cold stress) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEa0008M06f, mRNA sequence
Length = 742
Score = 160 bits (344), Expect(3) = 3e-054
Identities = 68/105 (64%), Positives = 77/105 (73%)
Frame = +1 / +1
Query: 214 GVEAKIWQVPEILSEEVLGKMGAPPKPDVPVITPQELAEADGILFGFPTRFGMMAAQMKA 393
GVEAK+WQV + LSEEVLGKM APPK DVPVITP +LA+ADG + GFPT F MM+AQ A
Sbjct: 10 GVEAKLWQVSDTLSEEVLGKMSAPPKSDVPVITPNDLADADGFVVGFPT*FRMMSAQFTA 189
Query: 394 FFDATGGLWREQSLAGKPAGMFFSXXXXXXXXXXXPLTAITQLTH 528
F DATGGLWR Q LAGKPAG+F+S TAIT+L H
Sbjct: 190 FMDATGGLWRTQ*LAGKPAGIFYSTVSQRGGHETTSSTAITRLFH 324
Score = 100 bits (213), Expect(2) = 2e-026
Identities = 50/81 (61%), Positives = 54/81 (66%)
Frame = -3 / -3
Query: 455 MPAGLPARLCSLQSPPVASKNAFI*AAIIPNLVGNPKRIPSASASSCGVMTGTSGLGGAP 276
+PAG PA L PPVAS A A II N VG P PSASA S GV+TGTS GGA
Sbjct: 251 IPAGFPASY*VLHRPPVASIKAVNCADIILNHVGKPTTNPSASARSFGVITGTSLFGGAL 72
Query: 275 IFPSTSSERISGTCHILASTP 213
IFP TSS+R+S TCH LASTP
Sbjct: 71 IFPRTSSDRVSETCHNLASTP 9
Score = 48.7 bits (100), Expect(3) = 3e-054
Identities = 21/44 (47%), Positives = 27/44 (61%)
Frame = +1 / +3
Query: 601 GSPYGAGTFAADGSRWPSEVELEHAFHQGKYFAGIAKKLKGSA* 732
G Y AG++A DGS P+E+ L FH GKY G+ KKL + *
Sbjct: 399 GVHYVAGSYAGDGSLMPTEL*LVQTFHLGKYILGLLKKLTATG* 530
Score = 41.8 bits (85), Expect(3) = 3e-054
Identities = 15/26 (57%), Positives = 19/26 (73%)
Frame = +1 / +2
Query: 529 HGMVFVPVGYTFGAKLFGMDQVQGGS 606
HGM+F +GYTF A +F M+QV GS
Sbjct: 326 HGMIFATIGYTFMASMFNMEQVTCGS 403
Score = 41.4 bits (84), Expect(2) = 2e-026
Identities = 18/45 (40%), Positives = 26/45 (57%)
Frame = -3 / -1
Query: 734 DQAEPLSFLAMPAKYFPWWKACSSSTSLGHLDPSAANVPAP*GLP 600
+Q +SF + P+ Y P W C++ +S+G DPS A PA * P
Sbjct: 532 NQPVAVSFFSNPSMYLPKWNVCTN*SSVGISDPSPAYDPAT*CTP 398
>gb|BM442858.2|BM442858 EBro02_SQ001_J09_R root, 3 week, hydroponic grown, low nitrogen, cv
Optic, EBro02 Hordeum vulgare subsp. vulgare cDNA clone
EBro02_SQ001_J09 5', mRNA sequence
Length = 507
Score = 210 bits (454), Expect = 7e-054
Identities = 85/108 (78%), Positives = 91/108 (84%)
Frame = +1 / +3
Query: 424 EQSLAGKPAGMFFSXXXXXXXXXXXPLTAITQLTHHGMVFVPVGYTFGAKLFGMDQVQGG 603
EQSLAGKPAG+FFS PLTA+TQLTHHGMVFVPVGYTFGAK+F MD+VQGG
Sbjct: 3 EQSLAGKPAGVFFSTGTQGGGQETTPLTAVTQLTHHGMVFVPVGYTFGAKMFDMDKVQGG 182
Query: 604 SPYGAGTFAADGSRWPSEVELEHAFHQGKYFAGIAKKLKGSA*SAHTP 747
SPYGAGTFA DGSRWPSE+ELEHAFHQGKYFAGIAKKLKGS+ H P
Sbjct: 183 SPYGAGTFAGDGSRWPSEMELEHAFHQGKYFAGIAKKLKGSSA*VHDP 326
Score = 152 bits (327), Expect(2) = 1e-042
Identities = 62/81 (76%), Positives = 62/81 (76%)
Frame = -3 / -3
Query: 749 RGVCADQAEPLSFLAMPAKYFPWWKACSSSTSLGHLDPSAANVPAP*GLPPWTWSMPNSL 570
RG C EP SFLAMPAKY PWWKACSSS S GHLDPS ANVPAP GLPP T SM N L
Sbjct: 328 RGSCTQAEEPFSFLAMPAKYLPWWKACSSSISDGHLDPSPANVPAPYGLPPCTLSMSNIL 149
Query: 569 APKV*PTGTNTMPWCVSWVIA 507
AP V PTGTNTMPW VSWV A
Sbjct: 148 APNVYPTGTNTMPWWVSWVTA 86
Score = 41.4 bits (84), Expect(2) = 1e-042
Identities = 20/33 (60%), Positives = 23/33 (69%)
Frame = -2 / -2
Query: 522 QLGNRRQRCSLLATTLGSSAEEHAGRLASEALL 424
QLG+ QR LL LG+ AEEHA RLA +ALL
Sbjct: 101 QLGHCCQRRRLLPAALGARAEEHARRLAGQALL 3
>gb|BF621463.3|BF621463 HVSMEa0011B06f Hordeum vulgare seedling shoot EST library
HVcDNA0001 (Cold stress) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEa0011B06f, mRNA sequence
Length = 805
Score = 170 bits (366), Expect(2) = 8e-054
Identities = 66/100 (66%), Positives = 80/100 (80%)
Frame = +1 / -3
Query: 331 ADGILFGFPTRFGMMAAQMKAFFDATGGLWREQSLAGKPAGMFFSXXXXXXXXXXXPLTA 510
+DG++ GF TRFGMM AQ+KAFFD+T GLW+ QSLAGKPAG+FF+ LTA
Sbjct: 509 SDGVMIGFLTRFGMMTAQIKAFFDSTAGLWQAQSLAGKPAGVFFATGTQGVGQETTALTA 330
Query: 511 ITQLTHHGMVFVPVGYTFGAKLFGMDQVQGGSPYGAGTFA 630
+TQLTHHGM+FVPVGYT GA +F +D+V+GGSPYGAGTFA
Sbjct: 329 VTQLTHHGMLFVPVGYTHGAGMFAVDEVKGGSPYGAGTFA 210
Score = 64.3 bits (134), Expect(3) = 3e-030
Identities = 29/46 (63%), Positives = 31/46 (67%)
Frame = -3 / +1
Query: 644 LDPSAANVPAP*GLPPWTWSMPNSLAPKV*PTGTNTMPWCVSWVIA 507
L + A VPAP GLPP T S N AP V*PTGT +MPWCVS V A
Sbjct: 196 LPSAPAKVPAPYGLPPLTSSTANMPAPCV*PTGTKSMPWCVSCVTA 333
Score = 60.6 bits (126), Expect(2) = 8e-054
Identities = 26/36 (72%), Positives = 29/36 (80%)
Frame = +1 / -3
Query: 631 ADGSRWPSEVELEHAFHQGKYFAGIAKKLKGSA*SA 738
ADGSR PS+ EL A HQGKYFAG+AKKLK + *SA
Sbjct: 206 ADGSRTPSDAELALAAHQGKYFAGVAKKLKAAV*SA 99
Score = 55.1 bits (114), Expect(3) = 3e-030
Identities = 25/43 (58%), Positives = 27/43 (62%)
Frame = -3 / +1
Query: 461 KNMPAGLPARLCSLQSPPVASKNAFI*AAIIPNLVGNPKRIPS 333
K PAGLPAR C+ P V SKNAFI A I+PN V P PS
Sbjct: 379 KKTPAGLPARDCACHRPAVESKNAFICAVIMPNRVRKPIMTPS 507
Score = 50.6 bits (104), Expect(3) = 3e-030
Identities = 23/34 (67%), Positives = 24/34 (70%)
Frame = -3 / +1
Query: 731 QAEPLSFLAMPAKYFPWWKACSSSTSLGHLDPSA 630
Q LSFLA PAKYFPW A +SS SLG L PSA
Sbjct: 106 QTAALSFLATPAKYFPWCAAKASSASLGVLLPSA 207
>gb|BF260943.3|BF260943 HVSMEf0023F15f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEf0023F15f, mRNA sequence
Length = 558
Score = 167 bits (360), Expect(2) = 5e-053
Identities = 66/92 (71%), Positives = 76/92 (82%)
Frame = +1 / +3
Query: 355 PTRFGMMAAQMKAFFDATGGLWREQSLAGKPAGMFFSXXXXXXXXXXXPLTAITQLTHHG 534
PTRFGMMAAQMKAFFD+TGGLW+ QSLAGKPAG+FF+ LTA+TQLTHHG
Sbjct: 3 PTRFGMMAAQMKAFFDSTGGLWQAQSLAGKPAGVFFATGTQGGGQETTALTAVTQLTHHG 182
Query: 535 MVFVPVGYTFGAKLFGMDQVQGGSPYGAGTFA 630
M+FVPVGYT GA +F +D+V+GGSPYGAGTFA
Sbjct: 183 MLFVPVGYTHGAGMFAVDEVKGGSPYGAGTFA 278
Score = 64.3 bits (134), Expect(3) = 5e-031
Identities = 29/46 (63%), Positives = 31/46 (67%)
Frame = -3 / -3
Query: 644 LDPSAANVPAP*GLPPWTWSMPNSLAPKV*PTGTNTMPWCVSWVIA 507
L + A VPAP GLPP T S N AP V*PTGT +MPWCVS V A
Sbjct: 292 LPSAPAKVPAPYGLPPLTSSTANMPAPCV*PTGTKSMPWCVSCVTA 155
Score = 60.6 bits (126), Expect(2) = 5e-053
Identities = 26/36 (72%), Positives = 29/36 (80%)
Frame = +1 / +3
Query: 631 ADGSRWPSEVELEHAFHQGKYFAGIAKKLKGSA*SA 738
ADGSR PS+ EL A HQGKYFAG+AKKLK + *SA
Sbjct: 282 ADGSRTPSDAELALAAHQGKYFAGVAKKLKAAV*SA 389
Score = 57.9 bits (120), Expect(3) = 5e-031
Identities = 25/36 (69%), Positives = 27/36 (75%)
Frame = -3 / -3
Query: 461 KNMPAGLPARLCSLQSPPVASKNAFI*AAIIPNLVG 354
K PAGLPAR C+ Q PPV SK AFI AAI+PN VG
Sbjct: 109 KKTPAGLPARDCACQRPPVESKKAFICAAIMPNRVG 2
Score = 50.6 bits (104), Expect(3) = 5e-031
Identities = 23/34 (67%), Positives = 24/34 (70%)
Frame = -3 / -3
Query: 731 QAEPLSFLAMPAKYFPWWKACSSSTSLGHLDPSA 630
Q LSFLA PAKYFPW A +SS SLG L PSA
Sbjct: 382 QTAALSFLATPAKYFPWCAAKASSASLGVLLPSA 281
>gb|BG414812.2|BG414812 HVSMEk0003M24f Hordeum vulgare testa/pericarp EST library
HVcDNA0013 (normal) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEk0003M24f, mRNA sequence
Length = 867
Score = 202 bits (436), Expect = 2e-051
Identities = 82/138 (59%), Positives = 96/138 (69%)
Frame = +1 / +2
Query: 304 VITPQELAEADGILFGFPTRFGMMAAQMKAFFDATGGLWREQSLAGKPAGMFFSXXXXXX 483
+ P +L EADG+LFG T + +AAQ+KAFFD+TG LW +Q LAGKPAG F S
Sbjct: 14 ISAPADLEEADGVLFGLGTTYRAIAAQIKAFFDSTGSLWEKQRLAGKPAGFFVSTGTQGG 193
Query: 484 XXXXXPLTAITQLTHHGMVFVPVGYTFGAKLFGMDQVQGGSPYGAGTFAADGSRWPSEVE 663
TAITQL HHGM+FVP+GYTFG+ +F MD ++GGSPYGAG FA DGSR PSE E
Sbjct: 194 GQETTAWTAITQLVHHGMLFVPIGYTFGSGMFNMDDIRGGSPYGAGVFAGDGSRHPSEAE 373
Query: 664 LEHAFHQGKYFAGIAKKL 717
L A HQGKY A KKL
Sbjct: 374 LALAEHQGKYMAAFVKKL 427
Score = 99.6 bits (211), Expect(2) = 5e-031
Identities = 43/70 (61%), Positives = 46/70 (65%)
Frame = -3 / -1
Query: 716 SFLAMPAKYFPWWKACSSSTSLGHLDPSAANVPAP*GLPPWTWSMPNSLAPKV*PTGTNT 537
SF A Y PW A +SS SLG L PS A PAP*GLPP SM N PKV*P GTN+
Sbjct: 426 SFFTKAAMYLPWCSASASSASLGCLLPSPAKTPAP*GLPPLMSSMLNMPEPKV*PMGTNS 247
Query: 536 MPWCVSWVIA 507
+PWC SWVIA
Sbjct: 246 IPWCTSWVIA 217
Score = 55.1 bits (114), Expect(2) = 5e-031
Identities = 27/51 (52%), Positives = 30/51 (58%)
Frame = -3 / -1
Query: 464 LKNMPAGLPARLCSLQSPPVASKNAFI*AAIIPNLVGNPKRIPSASASSCG 312
L PAG PA LC Q PV SKNA I AA+ +V NP PSAS+ S G
Sbjct: 174 LTKNPAGFPASLCFSQREPVESKNALICAAMAR*VVPNPNSTPSASSRSAG 22
>gb|BF255030.2|BF255030 HVSMEf0005L23f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEf0005L23f, mRNA sequence
Length = 817
Score = 138 bits (297), Expect(2) = 5e-050
Identities = 60/92 (65%), Positives = 67/92 (72%)
Frame = +1 / +3
Query: 280 APPKPDVPVITPQELAEADGILFGFPTRFGMMAAQMKAFFDATGGLWREQSLAGKPAGMF 459
AP + D PVIT +LAEADGILFGFPTR GMMAAQMKAFFD+TGGLW+ QSL+GKPAG+F
Sbjct: 312 APGREDHPVITASQLAEADGILFGFPTRIGMMAAQMKAFFDSTGGLWQAQSLSGKPAGVF 491
Query: 460 FSXXXXXXXXXXXPLTAITQLTHHGMVFVPVG 555
F LT TQLTH GM+ VP G
Sbjct: 492 FVTGTQGGGQETTDLTDGTQLTHDGMLNVPDG 587
Score = 81.3 bits (171), Expect(3) = 3e-033
Identities = 37/61 (60%), Positives = 41/61 (67%)
Frame = -3 / -1
Query: 461 KNMPAGLPARLCSLQSPPVASKNAFI*AAIIPNLVGNPKRIPSASASSCGVMTGTSGLGG 282
KN PAG P RLC+ PPV SK AFI AAI+P VG P R+PSASAS V+TG S G
Sbjct: 493 KNTPAGFPERLCACHRPPVESKKAFICAAIMPIRVGKPNRMPSASASWLAVITGWSSRPG 314
Query: 281 A 279
A
Sbjct: 313 A 311
Score = 79.4 bits (167), Expect(2) = 5e-050
Identities = 36/65 (55%), Positives = 42/65 (64%)
Frame = +1 / +3
Query: 94 GHRSSETSPMAVKIYVVYYSMYGHVGKLADEIKKGALSVEGVEAKIWQVPEILSEEVLGK 273
G + S V + YYS +GHV LA+E+KKGA SV GVE IW+VPE L EEVLGK
Sbjct: 123 GQQIDLISATFVHYFYRYYSTWGHVATLAEEMKKGADSVPGVEVTIWRVPETLPEEVLGK 302
Query: 274 MGAPP 288
M A P
Sbjct: 303 MHAAP 317
Score = 71.2 bits (149), Expect(3) = 3e-033
Identities = 30/48 (62%), Positives = 36/48 (75%)
Frame = -3 / -1
Query: 287 GGAPIFPSTSSERISGTCHILASTPSTDKAPFLISSASLPTCPYME*Y 144
G A IFPSTSS +SGT ++ STP T+ APF ISSAS+ TCP +E*Y
Sbjct: 316 GAACIFPSTSSGSVSGTRQMVTSTPGTESAPFFISSASVATCPQVE*Y 173
Score = 27.6 bits (54), Expect(3) = 3e-033
Identities = 9/14 (64%), Positives = 12/14 (85%)
Frame = -3 / -1
Query: 554 PTGTNTMPWCVSWV 513
P+GT ++P CVSWV
Sbjct: 586 PSGTFSIPSCVSWV 545
>gb|BQ462713.1|BQ462713 HI01M13T HI Hordeum vulgare subsp. vulgare cDNA clone HI01M13
5-PRIME, mRNA sequence
Length = 381
Score = 111 bits (238), Expect(2) = 4e-048
Identities = 45/59 (76%), Positives = 49/59 (83%)
Frame = +1 / +3
Query: 121 MAVKIYVVYYSMYGHVGKLADEIKKGALSVEGVEAKIWQVPEILSEEVLGKMGAPPKPD 297
MA KIY+VYYS YGHV KLADEI+KG SVEGVE K+WQVPE LS+E L KMGAPPK D
Sbjct: 30 MAAKIYIVYYSTYGHVAKLADEIQKGVSSVEGVEVKLWQVPETLSDESLAKMGAPPKRD 206
Score = 100 bits (212), Expect(2) = 4e-048
Identities = 40/61 (65%), Positives = 46/61 (75%)
Frame = +1 / +3
Query: 283 PPKPDVPVITPQELAEADGILFGFPTRFGMMAAQMKAFFDATGGLWREQSLAGKPAGMFF 462
P + DVPVI+P ELA+ADG++FGFPTRF MM Q KAF D T LW Q LAGKPA +FF
Sbjct: 195 PKRDDVPVISPAELADADGLIFGFPTRFCMMPMQFKAFMDGTSELWCPQRLAGKPAALFF 374
Query: 463 S 465
S
Sbjct: 375 S 377
Score = 70.3 bits (147), Expect(2) = 8e-026
Identities = 36/60 (60%), Positives = 37/60 (61%)
Frame = -3 / -3
Query: 461 KNMPAGLPARLCSLQSPPVASKNAFI*AAIIPNLVGNPKRIPSASASSCGVMTGTSGLGG 282
KN AGLPA C S V S NA I+ NLVGNPK PSASASS G MTGTS L G
Sbjct: 373 KNNAAGLPASRCGHHSSLVPSMNALNCMGIMQNLVGNPKIRPSASASSAGEMTGTSSLFG 194
Score = 67.0 bits (140), Expect(2) = 8e-026
Identities = 30/63 (47%), Positives = 40/63 (63%)
Frame = -2 / -2
Query: 309 DDWHVGLRGRAHLSKHFFRENFRDLPYLSLNTFNR*GTFLDLVS*FANMPIHGIVHNVDL 130
D + + LR HL + F RE+ RDLP L L+ F+R L+L+ * +M I G+VHNVDL
Sbjct: 218 DRYVIPLRWSTHLCE*FVRESLRDLP*LDLHAFDRRHALLNLIC*LGHMTIGGVVHNVDL 39
Query: 129 NRH 121
RH
Sbjct: 38 GRH 30
>gb|BI951063.1|BI951063 HVSMEl0024E03f Hordeum vulgare spike EST library HVcDNA0012
(Fusarium infected) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEl0024E03f, mRNA sequence
Length = 871
Score = 116 bits (248), Expect(2) = 1e-046
Identities = 49/86 (56%), Positives = 58/86 (67%)
Frame = +1 / +2
Query: 280 APPKPDVPVITPQELAEADGILFGFPTRFGMMAAQMKAFFDATGGLWREQSLAGKPAGMF 459
AP + D PVIT ++LAEADGILFGFPTR GMMA QMKA FD+TGGLWR+QSLAG+P
Sbjct: 233 APGREDHPVITARQLAEADGILFGFPTRVGMMAGQMKALFDSTGGLWRQQSLAGEPEAGV 412
Query: 460 FSXXXXXXXXXXXPLTAITQLTHHGM 537
L +++LT HGM
Sbjct: 413 LRTGTQGGGQRTTALIRVSELTAHGM 490
Score = 90.9 bits (192), Expect(2) = 1e-046
Identities = 39/66 (59%), Positives = 46/66 (69%)
Frame = +1 / +2
Query: 91 SGHRSSETSPMAVKIYVVYYSMYGHVGKLADEIKKGALSVEGVEAKIWQVPEILSEEVLG 270
S ++ MA KIY+VYYS +GHV LA+EIKKGA SV VE IW+VPE L E+VLG
Sbjct: 41 SNQGDHNSTAMATKIYIVYYSTWGHVATLAEEIKKGAGSVPDVEVTIWRVPETLPEDVLG 220
Query: 271 KMGAPP 288
KM A P
Sbjct: 221 KMHAAP 238
Score = 73.5 bits (154), Expect(2) = 5e-028
Identities = 35/56 (62%), Positives = 41/56 (73%)
Frame = -3 / -2
Query: 287 GGAPIFPSTSSERISGTCHILASTPSTDKAPFLISSASLPTCPYME*YTT*ILTAI 120
G A IFPSTSS +SGT ++ ST T+ APFLISSAS+ TCP +E* T *IL AI
Sbjct: 237 GAACIFPSTSSGSVSGTRQMVTSTSGTEPAPFLISSASVATCPQVE**TM*ILVAI 70
Score = 71.2 bits (149), Expect(2) = 5e-028
Identities = 34/61 (55%), Positives = 37/61 (60%)
Frame = -3 / -2
Query: 461 KNMPAGLPARLCSLQSPPVASKNAFI*AAIIPNLVGNPKRIPSASASSCGVMTGTSGLGG 282
K +G PAR C Q PPV S AFI AI+P VG P R+PSASAS VMTG S G
Sbjct: 414 KTPASGSPARDCCRQRPPVESNKAFICPAIMPTRVGKPNRMPSASASCLAVMTGWSSRPG 235
Query: 281 A 279
A
Sbjct: 234 A 232
>gb|AV927067.1|AV927067 AV927067 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp.
vulgare cDNA clone basd26j21 5', mRNA sequence
Length = 507
Score = 183 bits (394), Expect = 1e-045
Identities = 72/83 (86%), Positives = 77/83 (92%)
Frame = +1 / +3
Query: 499 PLTAITQLTHHGMVFVPVGYTFGAKLFGMDQVQGGSPYGAGTFAADGSRWPSEVELEHAF 678
PLTA+TQLTHHGMVFVPVGYTFGAK+F MD+VQGGSPYGAGTFA DGSRWPSE+ELEHAF
Sbjct: 3 PLTAVTQLTHHGMVFVPVGYTFGAKMFDMDKVQGGSPYGAGTFAGDGSRWPSEMELEHAF 182
Query: 679 HQGKYFAGIAKKLKGSA*SAHTP 747
HQGKYFAGIAKKLKGS+ H P
Sbjct: 183 HQGKYFAGIAKKLKGSSA*VHDP 251
Score = 152 bits (327), Expect = 2e-036
Identities = 62/81 (76%), Positives = 62/81 (76%)
Frame = -3 / -3
Query: 749 RGVCADQAEPLSFLAMPAKYFPWWKACSSSTSLGHLDPSAANVPAP*GLPPWTWSMPNSL 570
RG C EP SFLAMPAKY PWWKACSSS S GHLDPS ANVPAP GLPP T SM N L
Sbjct: 253 RGSCTQAEEPFSFLAMPAKYLPWWKACSSSISDGHLDPSPANVPAPYGLPPCTLSMSNIL 74
Query: 569 APKV*PTGTNTMPWCVSWVIA 507
AP V PTGTNTMPW VSWV A
Sbjct: 73 APNVYPTGTNTMPWWVSWVTA 11
>gb|BM443151.2|BM443151 EBro02_SQ002_M05_R root, 3 week, hydroponic grown, low nitrogen, cv
Optic, EBro02 Hordeum vulgare subsp. vulgare cDNA clone
EBro02_SQ002_M05 5', mRNA sequence
Length = 384
Score = 108 bits (231), Expect(2) = 2e-045
Identities = 44/55 (80%), Positives = 49/55 (89%)
Frame = +1 / +1
Query: 280 APPKPDVPVITPQELAEADGILFGFPTRFGMMAAQMKAFFDATGGLWREQSLAGK 444
AP + D PVIT +LAEADGILFGFPTRFGMMAAQMKAFFD+TGGLW+ QSL+GK
Sbjct: 220 APGREDHPVITASQLAEADGILFGFPTRFGMMAAQMKAFFDSTGGLWQAQSLSGK 384
Score = 94.5 bits (200), Expect(2) = 2e-045
Identities = 40/58 (68%), Positives = 45/58 (77%)
Frame = +1 / +1
Query: 115 SPMAVKIYVVYYSMYGHVGKLADEIKKGALSVEGVEAKIWQVPEILSEEVLGKMGAPP 288
S MA KIY+VYYS +GHV LA+E+KKGA SV GVE IW+VPE L EEVLGKM A P
Sbjct: 52 SAMATKIYIVYYSTWGHVATLAEEMKKGADSVPGVEVTIWRVPETLPEEVLGKMHAAP 225
Score = 81.7 bits (172), Expect(2) = 1e-031
Identities = 36/58 (62%), Positives = 43/58 (74%)
Frame = -3 / -2
Query: 287 GGAPIFPSTSSERISGTCHILASTPSTDKAPFLISSASLPTCPYME*YTT*ILTAIGE 114
G A IFPSTSS +SGT ++ STP T+ APF ISSAS+ TCP +E*YT *IL AI +
Sbjct: 224 GAACIFPSTSSGSVSGTRQMVTSTPGTESAPFFISSASVATCPQVE*YTM*ILVAIAD 51
Score = 75.3 bits (158), Expect(2) = 1e-031
Identities = 34/54 (62%), Positives = 38/54 (70%)
Frame = -3 / -2
Query: 440 PARLCSLQSPPVASKNAFI*AAIIPNLVGNPKRIPSASASSCGVMTGTSGLGGA 279
P RLC+ Q PPV SK AFI AAI+PN VG P R+PSASAS V+TG S GA
Sbjct: 380 PERLCACQRPPVESKKAFICAAIMPNRVGKPNRMPSASASWLAVITGWSSRPGA 219
>gb|BM374970.1|BM374970 EBma05_SQ003_O01_R maternal, 12 DPA, no treatment, cv Optic, EBma05
Hordeum vulgare subsp. vulgare cDNA clone
EBma05_SQ003_O01 5', mRNA sequence
Length = 289
Score = 145 bits (311), Expect(2) = 3e-045
Identities = 58/62 (93%), Positives = 61/62 (98%)
Frame = +1 / +2
Query: 280 APPKPDVPVITPQELAEADGILFGFPTRFGMMAAQMKAFFDATGGLWREQSLAGKPAGMF 459
APPK DVPVI+PQELAEADG+LFGFPTRFGMMAAQMKAFFDATGGLWREQSLAGKPAG+F
Sbjct: 2 APPKTDVPVISPQELAEADGVLFGFPTRFGMMAAQMKAFFDATGGLWREQSLAGKPAGVF 181
Query: 460 FS 465
FS
Sbjct: 182 FS 187
Score = 116 bits (249), Expect(2) = 1e-032
Identities = 52/62 (83%), Positives = 54/62 (87%)
Frame = -3 / -2
Query: 464 LKNMPAGLPARLCSLQSPPVASKNAFI*AAIIPNLVGNPKRIPSASASSCGVMTGTSGLG 285
LKN PAGLPARLCSL SPPVASKNAFI AAI+PNLVGNP R PSASASS G +TGTS LG
Sbjct: 186 LKNTPAGLPARLCSLHSPPVASKNAFICAAIMPNLVGNPNRTPSASASS*GEITGTSVLG 7
Query: 284 GA 279
GA
Sbjct: 6 GA 1
Score = 57.0 bits (118), Expect(2) = 3e-045
Identities = 21/22 (95%), Positives = 22/22 (100%)
Frame = +1 / +3
Query: 499 PLTAITQLTHHGMVFVPVGYTF 564
PLTA+TQLTHHGMVFVPVGYTF
Sbjct: 222 PLTAVTQLTHHGMVFVPVGYTF 287
Score = 43.2 bits (88), Expect(2) = 1e-032
Identities = 16/20 (80%), Positives = 16/20 (80%)
Frame = -3 / -1
Query: 566 PKV*PTGTNTMPWCVSWVIA 507
P V PTGTNTMPW VSWV A
Sbjct: 289 PNVYPTGTNTMPWWVSWVTA 230
>gb|BQ469266.1|BQ469266 HM03O09r HM Hordeum vulgare subsp. vulgare cDNA clone HM03O09
5-PRIME, mRNA sequence
Length = 479
Score = 178 bits (383), Expect = 4e-044
Identities = 71/77 (92%), Positives = 75/77 (97%)
Frame = +1 / +2
Query: 502 LTAITQLTHHGMVFVPVGYTFGAKLFGMDQVQGGSPYGAGTFAADGSRWPSEVELEHAFH 681
LT +TQLTHHGMVFVPVGYTFGAKLF MD+VQGGSPYGAGTFAADGSRWPSE+ELEHAFH
Sbjct: 17 LTTVTQLTHHGMVFVPVGYTFGAKLFDMDKVQGGSPYGAGTFAADGSRWPSEMELEHAFH 196
Query: 682 QGKYFAGIAKKLKGSA* 732
QG+YFAGIAKKLKGSA*
Sbjct: 197 QGQYFAGIAKKLKGSA* 247
Score = 137 bits (294), Expect = 8e-032
Identities = 57/71 (80%), Positives = 60/71 (84%)
Frame = -3 / -3
Query: 731 QAEPLSFLAMPAKYFPWWKACSSSTSLGHLDPSAANVPAP*GLPPWTWSMPNSLAPKV*P 552
QA+PLSF AMPAKY PWWKACSSS S GHL+PSAANVPAP GLPP T SM NSLAPKV P
Sbjct: 246 QADPLSFFAMPAKY*PWWKACSSSISDGHLEPSAANVPAPYGLPP*TLSMSNSLAPKVYP 67
Query: 551 TGTNTMPWCVS 519
TGT TMPW V+
Sbjct: 66 TGTKTMPW*VN 34
>gb|BQ661537.1|BQ661537 HM03O09u HM Hordeum vulgare subsp. vulgare cDNA clone HM03O09
3-PRIME, mRNA sequence
Length = 479
Score = 178 bits (383), Expect = 4e-044
Identities = 71/77 (92%), Positives = 75/77 (97%)
Frame = +1 / -2
Query: 502 LTAITQLTHHGMVFVPVGYTFGAKLFGMDQVQGGSPYGAGTFAADGSRWPSEVELEHAFH 681
LT +TQLTHHGMVFVPVGYTFGAKLF MD+VQGGSPYGAGTFAADGSRWPSE+ELEHAFH
Sbjct: 463 LTTVTQLTHHGMVFVPVGYTFGAKLFDMDKVQGGSPYGAGTFAADGSRWPSEMELEHAFH 284
Query: 682 QGKYFAGIAKKLKGSA* 732
QG+YFAGIAKKLKGSA*
Sbjct: 283 QGQYFAGIAKKLKGSA* 233
Score = 137 bits (294), Expect = 8e-032
Identities = 57/71 (80%), Positives = 60/71 (84%)
Frame = -3 / +3
Query: 731 QAEPLSFLAMPAKYFPWWKACSSSTSLGHLDPSAANVPAP*GLPPWTWSMPNSLAPKV*P 552
QA+PLSF AMPAKY PWWKACSSS S GHL+PSAANVPAP GLPP T SM NSLAPKV P
Sbjct: 234 QADPLSFFAMPAKY*PWWKACSSSISDGHLEPSAANVPAPYGLPP*TLSMSNSLAPKVYP 413
Query: 551 TGTNTMPWCVS 519
TGT TMPW V+
Sbjct: 414 TGTKTMPW*VN 446
>gb|BG366911.1|BG366911 HVSMEi0008P02f Hordeum vulgare 20 DAP spike EST library HVcDNA0010
(20 DAP) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEi0008P02f, mRNA sequence
Length = 493
Score = 98.7 bits (209), Expect(3) = 3e-042
Identities = 42/61 (68%), Positives = 48/61 (78%)
Frame = +1 / +2
Query: 280 APPKPDVPVITPQELAEADGILFGFPTRFGMMAAQMKAFFDATGGLWREQSLAGKPAGMF 459
AP + D PVIT +LAEADGILFGF TR MMAAQMKAFFD+TGGLW+ L+GKP +F
Sbjct: 203 APGR*DHPVITASQLAEADGILFGFTTRCCMMAAQMKAFFDSTGGLWQAHILSGKPDDVF 382
Query: 460 F 462
F
Sbjct: 383 F 385
Score = 81.3 bits (171), Expect(3) = 3e-042
Identities = 35/58 (60%), Positives = 42/58 (72%)
Frame = +1 / +2
Query: 115 SPMAVKIYVVYYSMYGHVGKLADEIKKGALSVEGVEAKIWQVPEILSEEVLGKMGAPP 288
S + KIY+V YS +GHV LA+E+KKGA SV GV IW+VPE L EEVLGKM + P
Sbjct: 35 SAVGTKIYIVCYSTWGHVATLAEEMKKGADSVPGV*VTIWRVPETLPEEVLGKMHSAP 208
Score = 69.8 bits (146), Expect(3) = 7e-029
Identities = 31/53 (58%), Positives = 38/53 (71%)
Frame = -3 / -2
Query: 287 GGAPIFPSTSSERISGTCHILASTPSTDKAPFLISSASLPTCPYME*YTT*IL 129
G IFPSTSS +SGT ++ TP T+ APF ISSAS+ TCP +E*+T *IL
Sbjct: 207 GAECIFPSTSSGSVSGTRQMVTYTPGTESAPFFISSASVATCPQVE*HTM*IL 49
Score = 68.4 bits (143), Expect(3) = 7e-029
Identities = 33/61 (54%), Positives = 39/61 (63%)
Frame = -3 / -2
Query: 461 KNMPAGLPARLCSLQSPPVASKNAFI*AAIIPNLVGNPKRIPSASASSCGVMTGTSGLGG 282
K +G P R+C+ Q PPV SK AFI AAI+ + V P RIPSASAS V+TG S G
Sbjct: 384 KKTSSGFPERICACQRPPVESKKAFICAAIMQHRVVKPNRIPSASASWLAVITGWS*RPG 205
Query: 281 A 279
A
Sbjct: 204 A 202
Score = 30.9 bits (61), Expect(3) = 3e-042
Identities = 11/18 (61%), Positives = 13/18 (72%)
Frame = +1 / +1
Query: 514 TQLTHHGMVFVPVGYTFG 567
TQLTHHGM+ +P G G
Sbjct: 436 TQLTHHGMLVLPAGSRTG 489
Score = 27.2 bits (53), Expect(3) = 7e-029
Identities = 9/14 (64%), Positives = 10/14 (71%)
Frame = -3 / -3
Query: 554 PTGTNTMPWCVSWV 513
P G +MP CVSWV
Sbjct: 476 PAGKTSMP*CVSWV 435
>gb|BM440840.2|BM440840 EBca01_SQ001_F05_R carpel, pre-anthesis, no treatment, cv Optic,
EBca01 Hordeum vulgare subsp. vulgare cDNA clone
EBca01_SQ001_F05 5', mRNA sequence
Length = 330
Score = 169 bits (363), Expect = 3e-041
Identities = 67/72 (93%), Positives = 71/72 (98%)
Frame = +1 / +3
Query: 517 QLTHHGMVFVPVGYTFGAKLFGMDQVQGGSPYGAGTFAADGSRWPSEVELEHAFHQGKYF 696
+LTHHGMVFVPVGYTFGAKLF MD+VQGGSPYGAGTFAADGSRWPSE+ELEHAFHQG+YF
Sbjct: 15 ELTHHGMVFVPVGYTFGAKLFDMDKVQGGSPYGAGTFAADGSRWPSEMELEHAFHQGQYF 194
Query: 697 AGIAKKLKGSA* 732
AGIAKKLKGSA*
Sbjct: 195 AGIAKKLKGSA* 230
Score = 137 bits (294), Expect = 8e-032
Identities = 57/71 (80%), Positives = 60/71 (84%)
Frame = -3 / -3
Query: 731 QAEPLSFLAMPAKYFPWWKACSSSTSLGHLDPSAANVPAP*GLPPWTWSMPNSLAPKV*P 552
QA+PLSF AMPAKY PWWKACSSS S GHL+PSAANVPAP GLPP T SM NSLAPKV P
Sbjct: 229 QADPLSFFAMPAKY*PWWKACSSSISDGHLEPSAANVPAPYGLPP*TLSMSNSLAPKVYP 50
Query: 551 TGTNTMPWCVS 519
TGT TMPW V+
Sbjct: 49 TGTKTMPW*VN 17
>gb|BQ660284.1|BQ660284 HI01M13w HI Hordeum vulgare subsp. vulgare cDNA clone HI01M13
3-PRIME, mRNA sequence
Length = 523
Score = 151 bits (325), Expect = 4e-036
Identities = 62/81 (76%), Positives = 70/81 (86%)
Frame = +1 / -3
Query: 502 LTAITQLTHHGMVFVPVGYTFGAKLFGMDQVQGGSPYGAGTFAADGSRWPSEVELEHAFH 681
LTAITQL HHGM+FVPVGYTFG+ +F M QV+GGSPYG+GT A DGSR P+E+EL+ AFH
Sbjct: 488 LTAITQLVHHGMLFVPVGYTFGSGMFEMGQVKGGSPYGSGTIAGDGSRVPTELELQQAFH 309
Query: 682 QGKYFAGIAKKLKGSA*SAHT 744
QGKYFAGIAKKLKGS *S T
Sbjct: 308 QGKYFAGIAKKLKGSP*STAT 246
Score = 122 bits (262), Expect(2) = 2e-028
Identities = 49/79 (62%), Positives = 56/79 (70%)
Frame = -3 / +1
Query: 743 VCADQAEPLSFLAMPAKYFPWWKACSSSTSLGHLDPSAANVPAP*GLPPWTWSMPNSLAP 564
V D EPLSF A+PAKYFPWWKAC SS+S+G DPS A VP P GLPP+T + N P
Sbjct: 247 VAVDHGEPLSFFAIPAKYFPWWKACCSSSSVGTRDPSPAMVPDPYGLPPFTCPISNMPEP 426
Query: 563 KV*PTGTNTMPWCVSWVIA 507
V PTGT +MPWC S V+A
Sbjct: 427 NVYPTGTKSMPWCTS*VMA 483
Score = 23.5 bits (45), Expect(2) = 2e-028
Identities = 10/18 (55%), Positives = 11/18 (61%)
Frame = -2 / +3
Query: 522 QLGNRRQRCSLLATTLGS 469
QL N RQR LAT L +
Sbjct: 468 QLSNGRQRSGFLATALAT 521
>gb|BF253467.3|BF253467 HVSMEf0001I01f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEf0001I01f, mRNA sequence
Length = 841
Score = 92.3 bits (195), Expect(2) = 5e-036
Identities = 40/62 (64%), Positives = 45/62 (72%)
Frame = +1 / +2
Query: 280 APPKPDVPVITPQELAEADGILFGFPTRFGMMAAQMKAFFDATGGLWREQSLAGKPAGMF 459
AP + D PVIT +LAEADGILFG+ TRFGMMA QMKA FD TGGLW+ SL PA
Sbjct: 302 APGREDHPVITASQLAEADGILFGYTTRFGMMAEQMKA*FDYTGGLWQAHSL*ESPANEI 481
Query: 460 FS 465
F+
Sbjct: 482 FT 487
Score = 79.4 bits (167), Expect(2) = 5e-036
Identities = 36/65 (55%), Positives = 42/65 (64%)
Frame = +1 / +2
Query: 94 GHRSSETSPMAVKIYVVYYSMYGHVGKLADEIKKGALSVEGVEAKIWQVPEILSEEVLGK 273
G + S V + YYS +GHV LA+E+KKGA SV GVE IW+VPE L EEVLGK
Sbjct: 113 GQQIDLISATFVHYFYRYYSTWGHVATLAEEMKKGADSVPGVEVTIWRVPETLPEEVLGK 292
Query: 274 MGAPP 288
M A P
Sbjct: 293 MHAAP 307
Score = 71.2 bits (149), Expect(2) = 1e-024
Identities = 30/48 (62%), Positives = 36/48 (75%)
Frame = -3 / -2
Query: 287 GGAPIFPSTSSERISGTCHILASTPSTDKAPFLISSASLPTCPYME*Y 144
G A IFPSTSS +SGT ++ STP T+ APF ISSAS+ TCP +E*Y
Sbjct: 306 GAACIFPSTSSGSVSGTRQMVTSTPGTESAPFFISSASVATCPQVE*Y 163
Score = 62.0 bits (129), Expect(2) = 1e-024
Identities = 32/57 (56%), Positives = 37/57 (64%)
Frame = -3 / -2
Query: 449 AGLPARLCSLQSPPVASKNAFI*AAIIPNLVGNPKRIPSASASSCGVMTGTSGLGGA 279
AGL RLC+ Q PPV S AFI +AI+PN V P +PSASAS V+TG S GA
Sbjct: 471 AGLSYRLCACQRPPV*SN*AFICSAIMPNRVV*PNSMPSASASWLAVITGWSSRPGA 301
>gb|BI957748.1|BI957748 HVSMEn0011A02f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0011A02f, mRNA sequence
Length = 886
Score = 143 bits (307), Expect(3) = 1e-035
Identities = 61/95 (64%), Positives = 66/95 (69%)
Frame = +1 / -2
Query: 439 GKPAGMFFSXXXXXXXXXXXPLTAITQLTHHGMVFVPVGYTFGAKLFGMDQVQGGSPYGA 618
GKP G PL +TQ+T MVFVP G FGA LF MD+VQGGSPYGA
Sbjct: 504 GKPPGSLSPLVPRLWAAVSQPLPPVTQVTPPRMVFVPAGSPFGANLFDMDKVQGGSPYGA 325
Query: 619 GTFAADGSRWPSEVELEHAFHQGKYFAGIAKKLKG 723
GTF ADGSRWPSE+ELEHA QG+YFAGIAKKLKG
Sbjct: 324 GTFPADGSRWPSEMELEHALPQGQYFAGIAKKLKG 220
Score = 109 bits (232), Expect = 3e-023
Identities = 47/66 (71%), Positives = 49/66 (74%)
Frame = -3 / +2
Query: 731 QAEPLSFLAMPAKYFPWWKACSSSTSLGHLDPSAANVPAP*GLPPWTWSMPNSLAPKV*P 552
Q PLSF AMPAKY PW +ACSSS S GHL+PSA NVPAP GLPP T SM N LAPK P
Sbjct: 212 QTNPLSFFAMPAKY*PWGRACSSSISDGHLEPSAGNVPAPYGLPP*TLSMSNRLAPKGDP 391
Query: 551 TGTNTM 534
GT TM
Sbjct: 392 AGTKTM 409
Score = 26.7 bits (52), Expect(3) = 1e-035
Identities = 10/22 (45%), Positives = 14/22 (63%)
Frame = +2 / -2
Query: 8 SRRSIHSTQQPPALPQPAHRSS 73
SRR+ T PP+ P P+H+ S
Sbjct: 804 SRRTSSYTPNPPSPPTPSHQRS 739
Score = 22.6 bits (43), Expect(3) = 1e-035
Identities = 11/40 (27%), Positives = 14/40 (35%)
Frame = +1 / -1
Query: 280 APPKPDVPVITPQELAEADGILFGFPTRFGMMAAQMKAFF 399
+PP P P + FPT F +A FF
Sbjct: 661 SPPTAQRPPPPPPHTSRTQSAPSRFPTSFRTIAPPQNPFF 542
>gb|BQ460085.1|BQ460085 HA07E05r HA Hordeum vulgare subsp. vulgare cDNA clone HA07E05
5-PRIME, mRNA sequence
Length = 615
Score = 145 bits (312), Expect = 3e-034
Identities = 60/97 (61%), Positives = 66/97 (68%)
Frame = +1 / +3
Query: 427 QSLAGKPAGMFFSXXXXXXXXXXXPLTAITQLTHHGMVFVPVGYTFGAKLFGMDQVQGGS 606
Q LAGKPAG F S TAITQL HHGM+FVP+GYTFG+ +F MD ++GGS
Sbjct: 3 QRLAGKPAGFFVSTGTQGGGQETTAWTAITQLVHHGMLFVPIGYTFGSGMFNMDDIRGGS 182
Query: 607 PYGAGTFAADGSRWPSEVELEHAFHQGKYFAGIAKKL 717
PYGAG FA DGSR PSE EL A HQGKY A KKL
Sbjct: 183 PYGAGVFAGDGSRQPSEAELALAEHQGKYMAAFVKKL 293
>gb|BU975019.1|BU975019 HB29N13r BC Hordeum vulgare subsp. vulgare cDNA clone HB29N13
5-PRIME, mRNA sequence
Length = 494
Score = 140 bits (300), Expect = 1e-032
Identities = 57/93 (61%), Positives = 63/93 (67%)
Frame = +1 / +2
Query: 439 GKPAGMFFSXXXXXXXXXXXPLTAITQLTHHGMVFVPVGYTFGAKLFGMDQVQGGSPYGA 618
GKPAG F S TAITQL HHGM+FVP+GYTFG+ +F MD ++GGSPYGA
Sbjct: 11 GKPAGFFVSTGTQGGGQETTAWTAITQLVHHGMLFVPIGYTFGSGMFNMDDIRGGSPYGA 190
Query: 619 GTFAADGSRWPSEVELEHAFHQGKYFAGIAKKL 717
G FA DGSR PSE EL A HQGKY A KKL
Sbjct: 191 GVFAGDGSRQPSEAELALAEHQGKYMAAFVKKL 289
>gb|BE455468.2|BE455468 HVSMEg0017E23f Hordeum vulgare pre-anthesis spike EST library
HVcDNA0008 (white to yellow anther) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEg0017E23f, mRNA sequence
Length = 584
Score = 84.0 bits (177), Expect(2) = 6e-032
Identities = 32/42 (76%), Positives = 36/42 (85%)
Frame = +1 / +1
Query: 340 ILFGFPTRFGMMAAQMKAFFDATGGLWREQSLAGKPAGMFFS 465
+LFGFPTR+G MAAQMKAFFD+TG LW +Q LAGKPAG F S
Sbjct: 424 VLFGFPTRYGAMAAQMKAFFDSTGSLWEKQRLAGKPAGFFVS 549
Score = 73.9 bits (155), Expect(2) = 6e-032
Identities = 33/59 (55%), Positives = 41/59 (69%)
Frame = +1 / +2
Query: 115 SPMAVKIYVVYYSMYGHVGKLADEIKKGALSVEGVEAKIWQVPEILSEEVLGKMGAPPK 291
S +++Y+V+YSMYGHV LA GA +VEGVEA + +VPE LS EVL KM AP K
Sbjct: 194 SSQTLRLYIVFYSMYGHVEALARHAAAGAGAVEGVEAVLRRVPETLSAEVLEKMQAPSK 370
>gb|AL501067.1|AL501067 AL501067 Hordeum vulgare Barke roots Hordeum vulgare subsp. vulgare
cDNA clone HW02O22u 3', mRNA sequence
Length = 556
Score = 93.2 bits (197), Expect(2) = 2e-029
Identities = 37/62 (59%), Positives = 43/62 (69%)
Frame = +1 / -1
Query: 445 PAGMFFSXXXXXXXXXXXPLTAITQLTHHGMVFVPVGYTFGAKLFGMDQVQGGSPYGAGT 624
P G+ LTA+TQLTHHGM+FVPVGYT GA +F MD+V+GGSPYGAGT
Sbjct: 502 PRGLLRHGHPRAAGQETTALTAVTQLTHHGMLFVPVGYTHGAGMFAMDEVKGGSPYGAGT 323
Query: 625 FA 630
FA
Sbjct: 322 FA 317
Score = 56.1 bits (116), Expect(2) = 2e-029
Identities = 24/30 (80%), Positives = 25/30 (83%)
Frame = +1 / -1
Query: 631 ADGSRWPSEVELEHAFHQGKYFAGIAKKLK 720
ADGSR PS+ EL A HQGKYFAGIAKKLK
Sbjct: 313 ADGSRVPSDAELALAAHQGKYFAGIAKKLK 224
>gb|BQ657721.1|BQ657721 HA07E05u HA Hordeum vulgare subsp. vulgare cDNA clone HA07E05
3-PRIME, mRNA sequence
Length = 541
Score = 127 bits (273), Expect = 7e-029
Identities = 50/71 (70%), Positives = 56/71 (78%)
Frame = +1 / -1
Query: 505 TAITQLTHHGMVFVPVGYTFGAKLFGMDQVQGGSPYGAGTFAADGSRWPSEVELEHAFHQ 684
TAITQL HHGM+FVP+GYTFG+ +F MD ++GGSPYGAG FA DGSR PSE EL A HQ
Sbjct: 535 TAITQLVHHGMLFVPIGYTFGSGMFNMDDIRGGSPYGAGVFAGDGSRQPSEAELALAEHQ 356
Query: 685 GKYFAGIAKKL 717
GKY A KKL
Sbjct: 355 GKYMAAFVKKL 323
Database: Hordeum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:16 PM
Number of letters in database: 175,134,539
Number of sequences in database: 312,970
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 542,691,218
Number of Sequences: 312970
Number of extensions: 10060144
Number of successful extensions: 116349
Number of sequences better than 1.0e-020: 70
length of database: 58,378,179
effective HSP length: 52
effective length of database: 42,103,739
effective search space used: 11283802052
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)