TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2437714.2.1
(1649 letters)
Database: Hordeum_nucl_with_EST.fasta
312,970 sequences; 175,134,539 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BF263242.2|BF263242 HV_CEa0006D16f Hordeum vulgare seedl... 379 e-104
gb|DQ352178.1| Hordeum vulgare subsp. vulgare rust resistan... 134 e-101
gb|BJ462905.1|BJ462905 BJ462905 K. Sato unpublished cDNA li... 250 3e-094
gb|BQ470244.1|BQ470244 HX02D24r HX Hordeum vulgare subsp. v... 328 5e-089
gb|BM375323.2|BM375323 EBem06_SQ002_P23_R embryo, 21 DPA, n... 299 5e-087
gb|BU998515.1|BU998515 HI11E21r HI Hordeum vulgare subsp. v... 171 4e-086
gb|BU987697.1|BU987697 HF15I03r HF Hordeum vulgare subsp. v... 255 5e-084
gb|BI959357.1|BI959357 HVSMEn0019F17f Hordeum vulgare rachi... 240 5e-083
gb|BQ764974.1|BQ764974 EBca01_SQ005_M12_R carpel, pre-anthe... 270 1e-082
gb|BF618611.2|BF618611 HVSMEc0006K17f Hordeum vulgare seedl... 219 6e-082
gb|AY943294.1| Hordeum vulgare subsp. vulgare clone BAC 673... 170 6e-080
gb|BI948692.1|BI948692 HVSMEl0010I13f Hordeum vulgare spike... 234 9e-080
gb|BM816713.1|BM816713 HC114E03_SK.ab1 HC Hordeum vulgare s... 291 1e-077
gb|CB877039.1|CB877039 HP03F15T HP Hordeum vulgare subsp. v... 228 1e-077
gb|AV917399.1|AV917399 AV917399 K. Sato unpublished cDNA li... 236 4e-077
gb|BQ756172.1|BQ756172 EBem05_SQ002_G10_R embryo, 14 DPA, n... 273 3e-076
gb|BF620215.2|BF620215 HVSMEc0019A20f Hordeum vulgare seedl... 282 3e-075
gb|BU979825.1|BU979825 HA17H19r HA Hordeum vulgare subsp. v... 278 7e-074
gb|BI948363.1|BI948363 HVSMEl0009E03f Hordeum vulgare spike... 147 4e-073
gb|BJ471569.1|BJ471569 BJ471569 K. Sato unpublished cDNA li... 273 2e-072
gb|CK123771.1|CK123771 BES1824105f02 BES1824 Hordeum vulgar... 220 3e-071
gb|BF629141.2|BF629141 HVSMEb0010B01f Hordeum vulgare seedl... 267 1e-070
gb|BQ768749.1|BQ768749 EBro08_SQ012_G15_R root, 3 week, dro... 175 8e-068
gb|BG366053.1|BG366053 HVSMEi0005A08f Hordeum vulgare 20 DA... 223 5e-064
gb|BE603119.2|BE603119 HVSMEh0102B06f Hordeum vulgare 5-45 ... 243 2e-063
gb|BJ463997.1|BJ463997 BJ463997 K. Sato unpublished cDNA li... 228 2e-062
gb|BM370583.2|BM370583 EBro08_SQ004_K14_R root, 3 week, dro... 237 5e-062
gb|CA008493.1|CA008493 HU11C07r HU Hordeum vulgare subsp. v... 237 1e-061
gb|BQ458306.1|BQ458306 HA05J18r HA Hordeum vulgare subsp. v... 121 9e-058
gb|BU977391.1|BU977391 HA11F10r HA Hordeum vulgare subsp. v... 203 1e-057
gb|BM370983.2|BM370983 EBro04_SQ003_C04_R root, 3 week, sal... 223 2e-057
gb|AL450804.1|AL450804 AL450804 Hordeum vulgare Barke etiol... 105 2e-057
gb|BM817316.1|BM817316 HC108A09_SK.ab1 HC Hordeum vulgare s... 120 9e-057
gb|BF261155.2|BF261155 HVSMEf0023O11f Hordeum vulgare seedl... 118 7e-056
gb|AV928198.1|AV928198 AV928198 K. Sato unpublished cDNA li... 217 2e-055
gb|CA019561.1|CA019561 HV12G05r HV Hordeum vulgare subsp. v... 127 1e-054
gb|AL504416.1|AL504416 AL504416 Hordeum vulgare Barke roots... 132 3e-054
gb|BM368926.2|BM368926 EBem07_SQ002_A13_R embryo, 28 DPA, n... 211 7e-054
gb|CV059608.1|CV059608 BNEL4A2 Barley EST endosperm library... 211 1e-053
gb|CK123889.1|CK123889 BES1824105o22 BES1824 Hordeum vulgar... 210 1e-053
gb|BU995308.1|BU995308 HM09N12r HM Hordeum vulgare subsp. v... 209 5e-053
gb|BI948235.1|BI948235 HVSMEl0008L10f Hordeum vulgare spike... 208 6e-053
gb|BU979813.1|BU979813 HA17G16r HA Hordeum vulgare subsp. v... 207 2e-052
gb|BJ464341.1|BJ464341 BJ464341 K. Sato unpublished cDNA li... 131 5e-052
gb|AL505017.1|AL505017 AL505017 Hordeum vulgare Barke roots... 136 2e-051
gb|AW982539.2|AW982539 HVSMEg0003I16f Hordeum vulgare pre-a... 98 2e-049
emb|AJ784275.3| Hordeum vulgare subsp. vulgare mRNA for put... 93 5e-049
gb|BF254175.2|BF254175 HVSMEf0003D17f Hordeum vulgare seedl... 145 1e-048
gb|BF267782.2|BF267782 HV_CEa0018O01f Hordeum vulgare seedl... 193 2e-048
gb|CA009418.1|CA009418 HU14B03r HU Hordeum vulgare subsp. v... 193 2e-048
gb|BJ471861.1|BJ471861 BJ471861 K. Sato unpublished cDNA li... 191 1e-047
gb|CV057992.1|CV057992 BNEL33b6 Barley EST endosperm librar... 190 2e-047
gb|BJ452111.1|BJ452111 BJ452111 K. Sato unpublished cDNA li... 149 3e-047
gb|BJ468873.1|BJ468873 BJ468873 K. Sato unpublished cDNA li... 107 3e-047
gb|AV930764.1|AV930764 AV930764 K. Sato unpublished cDNA li... 187 1e-046
gb|BE558923.1|BE558923 HV_CEb0020M17f Hordeum vulgare seedl... 77 3e-046
gb|BU990170.1|BU990170 HF24E15r HF Hordeum vulgare subsp. v... 184 1e-045
emb|AJ630116.2| Hordeum vulgare subsp. vulgare mRNA for Lys... 62 2e-045
gb|BQ760957.1|BQ760957 EBro03_SQ003_P10_R root, 3 week, wat... 94 2e-045
gb|BG414636.2|BG414636 HVSMEk0003C21f Hordeum vulgare testa... 99 4e-045
gb|BU978248.1|BU978248 HA12N04r HA Hordeum vulgare subsp. v... 75 4e-045
gb|BU986516.1|BU986516 HF12B14r HF Hordeum vulgare subsp. v... 178 6e-044
dbj|AB109213.1| Hordeum vulgare BRI1 gene for putative bras... 67 1e-043
gb|CA029588.1|CA029588 HZ65K08r HZ Hordeum vulgare subsp. v... 79 3e-043
gb|BJ462781.1|BJ462781 BJ462781 K. Sato unpublished cDNA li... 147 5e-043
gb|BE215906.2|BE215906 HV_CEb0008M23f Hordeum vulgare seedl... 175 5e-043
gb|CA007762.1|CA007762 HU08P03r HU Hordeum vulgare subsp. v... 174 1e-042
dbj|AB109215.1| Hordeum vulgare BRI1 gene for putative bras... 64 1e-042
gb|BF619969.1|BF619969 HVSMEc0009N18f Hordeum vulgare seedl... 173 2e-042
gb|BQ765999.1|BQ765999 EBro03_SQ008_C19_R root, 3 week, wat... 95 3e-042
gb|BQ459324.1|BQ459324 HA01H16r HA Hordeum vulgare subsp. v... 172 4e-042
gb|BE196273.3|BE196273 HVSMEh0091N12f Hordeum vulgare 5-45 ... 73 4e-042
gb|BQ465859.1|BQ465859 HU04O06r HU Hordeum vulgare subsp. v... 89 5e-042
gb|BQ470916.1|BQ470916 HX04G21r HX Hordeum vulgare subsp. v... 121 9e-042
gb|AV833754.1|AV833754 AV833754 K. Sato unpublished cDNA li... 99 2e-041
gb|AV833420.1|AV833420 AV833420 K. Sato unpublished cDNA li... 147 3e-041
gb|AL505425.1|AL505425 AL505425 Hordeum vulgare Barke roots... 99 5e-041
gb|BM376497.2|BM376497 EBem05_SQ002_G09_R embryo, 14 DPA, n... 64 2e-040
gb|CA008446.1|CA008446 HU10P21r HU Hordeum vulgare subsp. v... 120 2e-040
gb|AJ427599.1|AJ427599 AJ427599 Hordeum vulgare subsp. vulg... 69 1e-039
gb|BU999028.1|BU999028 HI12P05r HI Hordeum vulgare subsp. v... 79 1e-039
gb|BU972150.1|BU972150 HB20M05r BC Hordeum vulgare subsp. v... 91 1e-039
gb|BI953631.1|BI953631 HVSMEm0013K08f Hordeum vulgare green... 148 2e-039
gb|CA004587.1|CA004587 HS18B03r HS Hordeum vulgare subsp. v... 126 2e-039
gb|BQ767701.1|BQ767701 EBro08_SQ009_J13_R root, 3 week, dro... 162 4e-039
gb|BE455810.2|BE455810 HVSMEg0015F01f Hordeum vulgare pre-a... 146 6e-039
gb|AV914493.1|AV914493 AV914493 K. Sato unpublished cDNA li... 108 9e-039
gb|CW512175.1|CW512175 ToNAR_Steptoe_99c Steptoe Exon trapp... 131 9e-039
gb|BJ468677.1|BJ468677 BJ468677 K. Sato unpublished cDNA li... 134 2e-038
gb|AV916932.1|AV916932 AV916932 K. Sato unpublished cDNA li... 107 3e-038
gb|BU990590.1|BU990590 HF25H22r HF Hordeum vulgare subsp. v... 147 4e-038
gb|BE214948.1|BE214948 HV_CEb0005F01f Hordeum vulgare seedl... 103 4e-038
gb|AL504994.1|AL504994 AL504994 Hordeum vulgare Barke roots... 79 4e-038
gb|BU987088.1|BU987088 HF13M08r HF Hordeum vulgare subsp. v... 87 4e-038
gb|BE060160.1|BE060160 HVSMEg0011B12f Hordeum vulgare pre-a... 82 6e-038
gb|BU971791.1|BU971791 HB19L01r BC Hordeum vulgare subsp. v... 91 8e-038
gb|CB878333.1|CB878333 HP08C14T HP Hordeum vulgare subsp. v... 113 2e-037
gb|BG414953.2|BG414953 HVSMEk0004G13f Hordeum vulgare testa... 79 2e-037
gb|BI953661.1|BI953661 HVSMEm0013M10f Hordeum vulgare green... 144 9e-037
gb|BJ463669.1|BJ463669 BJ463669 K. Sato unpublished cDNA li... 65 1e-036
gb|BF626227.2|BF626227 HVSMEa0016I18f Hordeum vulgare seedl... 154 2e-036
gb|BI954047.1|BI954047 HVSMEm0015P18f Hordeum vulgare green... 123 2e-036
gb|BU999237.1|BU999237 HI13N22r HI Hordeum vulgare subsp. v... 127 3e-036
gb|CD663034.1|CD663034 UCRHV18_04ac05_b1 Drought-stressed D... 71 4e-036
gb|AV917322.1|AV917322 AV917322 K. Sato unpublished cDNA li... 107 5e-036
gb|CA012601.1|CA012601 HT05O08r HT Hordeum vulgare subsp. v... 97 9e-036
gb|BJ473762.1|BJ473762 BJ473762 K. Sato unpublished cDNA li... 132 1e-035
gb|CB879642.1|CB879642 HP03C03w HP Hordeum vulgare subsp. v... 132 1e-035
gb|BQ763863.1|BQ763863 EBro03_SQ005_I18_R root, 3 week, wat... 67 4e-035
gb|BE216579.2|BE216579 HV_CEb0010N22f Hordeum vulgare seedl... 52 4e-035
gb|BF260175.2|BF260175 HVSMEf0021E22f Hordeum vulgare seedl... 70 5e-035
gb|BG366077.2|BG366077 HVSMEi0005C13f Hordeum vulgare 20 DA... 60 7e-035
gb|BF624846.2|BF624846 HVSMEa0017O11f Hordeum vulgare seedl... 97 7e-035
gb|AV836699.1|AV836699 AV836699 K. Sato unpublished cDNA li... 144 8e-035
gb|BJ547296.1|BJ547296 BJ547296 K. Sato unpublished cDNA li... 72 2e-034
gb|BJ547039.1|BJ547039 BJ547039 K. Sato unpublished cDNA li... 72 3e-034
gb|AF085166.1|AF085166 Hordeum vulgare receptor-like kinase... 69 3e-034
gb|CB883350.1|CB883350 HQ01P13w HQ Hordeum vulgare subsp. v... 90 4e-034
gb|BF266815.2|BF266815 HV_CEa0016C07f Hordeum vulgare seedl... 99 4e-034
gb|CA007248.1|CA007248 HU07E16r HU Hordeum vulgare subsp. v... 88 7e-034
gb|BQ464358.1|BQ464358 HF02A21r HF Hordeum vulgare subsp. v... 110 7e-034
gb|BF629671.2|BF629671 HVSMEb0013B13f Hordeum vulgare seedl... 86 3e-033
gb|BF256987.2|BF256987 HVSMEf0011I21f Hordeum vulgare seedl... 116 3e-033
gb|BU974897.1|BU974897 HB29H02r BC Hordeum vulgare subsp. v... 143 3e-033
gb|BU975651.1|BU975651 HB31N14r BC Hordeum vulgare subsp. v... 143 3e-033
gb|AF085167.1|AF085167 Hordeum vulgare receptor-like kinase... 67 5e-033
gb|AV913572.1|AV913572 AV913572 K. Sato unpublished cDNA li... 81 6e-033
gb|BE437827.1|BE437827 SFR007.H10F990618 ITEC SFR Barley Le... 96 6e-033
gb|BE437952.1|BE437952 SFR009.C06F990511 ITEC SFR Barley Le... 96 6e-033
gb|BU996535.1|BU996535 HM13O21r HM Hordeum vulgare subsp. v... 100 9e-033
gb|BG369831.1|BG369831 HVSMEi0026D06f Hordeum vulgare 20 DA... 100 1e-032
gb|BG415671.2|BG415671 HVSMEk0007G10f Hordeum vulgare testa... 75 1e-032
gb|BQ464898.1|BQ464898 HU02B07r HU Hordeum vulgare subsp. v... 75 1e-032
gb|BU989324.1|BU989324 HF21G22r HF Hordeum vulgare subsp. v... 128 2e-032
gb|CA014738.1|CA014738 HT12D11r HT Hordeum vulgare subsp. v... 140 2e-032
gb|BQ764108.1|BQ764108 EBro03_SQ006_E12_R root, 3 week, wat... 100 2e-032
gb|BQ470048.1|BQ470048 HX01J23T HX Hordeum vulgare subsp. v... 96 2e-032
gb|BF263959.2|BF263959 HV_CEa0008C13f Hordeum vulgare seedl... 97 4e-032
gb|CA032771.1|CA032771 HX14C15r HX Hordeum vulgare subsp. v... 71 5e-032
gb|BI777999.2|BI777999 EBro07_SQ001_M06_R root, 3 week, red... 82 5e-032
gb|AW983189.3|AW983189 HVSMEg0008J16f Hordeum vulgare pre-a... 131 6e-032
gb|BI780740.2|BI780740 EBes01_SQ002_A07_R embryo sac, 4-6 D... 130 6e-032
gb|BU967283.1|BU967283 HB03N04r BC Hordeum vulgare subsp. v... 130 6e-032
gb|BU966755.1|BU966755 HB02E05r BC Hordeum vulgare subsp. v... 130 6e-032
gb|CA025815.1|CA025815 HZ53D16r HZ Hordeum vulgare subsp. v... 67 1e-031
gb|CK123279.1|CK123279 BES1824103c15 BES1824 Hordeum vulgar... 83 1e-031
gb|BM372335.2|BM372335 EBro03_SQ004_K20_R root, 3 week, wat... 68 1e-031
gb|BE558296.2|BE558296 HV_CEb0017B21f Hordeum vulgare seedl... 63 2e-031
gb|BU990022.1|BU990022 HF23L15r HF Hordeum vulgare subsp. v... 112 2e-031
gb|BE216031.3|BE216031 HV_CEb0009C21f Hordeum vulgare seedl... 63 2e-031
gb|BM372002.2|BM372002 EBma08_SQ004_K12_R maternal, 28 DPA,... 89 2e-031
gb|AV916201.1|AV916201 AV916201 K. Sato unpublished cDNA li... 131 3e-031
gb|BG415486.2|BG415486 HVSMEk0006K24f Hordeum vulgare testa... 136 3e-031
gb|BU985927.1|BU985927 HF09B02r HF Hordeum vulgare subsp. v... 71 3e-031
gb|BE231106.2|BE231106 HVSMEg0016L07f Hordeum vulgare pre-a... 70 3e-031
gb|BQ765210.1|BQ765210 EBro03_SQ006_D18_R root, 3 week, wat... 64 3e-031
gb|AV921787.1|AV921787 AV921787 K. Sato unpublished cDNA li... 136 4e-031
gb|AV922577.1|AV922577 AV922577 K. Sato unpublished cDNA li... 136 4e-031
gb|AV930770.1|AV930770 AV930770 K. Sato unpublished cDNA li... 136 4e-031
gb|BE194495.3|BE194495 HVSMEh0085M10f Hordeum vulgare 5-45 ... 125 5e-031
gb|BJ452203.1|BJ452203 BJ452203 K. Sato unpublished cDNA li... 85 5e-031
gb|CA032262.1|CA032262 HX12I03r HX Hordeum vulgare subsp. v... 70 5e-031
gb|AL503407.1|AL503407 AL503407 Hordeum vulgare Barke roots... 81 6e-031
gb|AV836427.1|AV836427 AV836427 K. Sato unpublished cDNA li... 52 6e-031
gb|BQ465158.1|BQ465158 HU02N02r HU Hordeum vulgare subsp. v... 66 2e-030
gb|BI952142.1|BI952142 HVSMEm0004M07f Hordeum vulgare green... 133 2e-030
gb|BJ465430.1|BJ465430 BJ465430 K. Sato unpublished cDNA li... 80 2e-030
gb|CA031139.1|CA031139 HX09C02r HX Hordeum vulgare subsp. v... 72 2e-030
gb|AL505939.1|AL505939 AL505939 Hordeum vulgare Barke roots... 79 2e-030
gb|BF260669.2|BF260669 HVSMEf0022K01f Hordeum vulgare seedl... 68 3e-030
gb|BQ765808.1|BQ765808 EBro03_SQ008_A09_R root, 3 week, wat... 69 3e-030
gb|BG367446.2|BG367446 HVSMEi0012E18f Hordeum vulgare 20 DA... 101 3e-030
gb|BF261904.2|BF261904 HV_CEa0002I16f Hordeum vulgare seedl... 69 3e-030
gb|BG367673.1|BG367673 HVSMEi0013D04f Hordeum vulgare 20 DA... 59 3e-030
gb|CA014211.1|CA014211 HT10L08r HT Hordeum vulgare subsp. v... 107 5e-030
gb|BU970265.1|BU970265 HB14C05r BC Hordeum vulgare subsp. v... 68 6e-030
gb|BM816134.1|BM816134 HC05B11_T3.ab1 HC Hordeum vulgare su... 64 7e-030
gb|AV932936.1|AV932936 AV932936 K. Sato unpublished cDNA li... 127 9e-030
gb|CA011685.1|CA011685 HT03E08r HT Hordeum vulgare subsp. v... 67 9e-030
gb|BJ471888.1|BJ471888 BJ471888 K. Sato unpublished cDNA li... 127 9e-030
gb|CA006745.1|CA006745 HU05J12r HU Hordeum vulgare subsp. v... 89 1e-029
gb|BJ464089.1|BJ464089 BJ464089 K. Sato unpublished cDNA li... 57 1e-029
gb|CD663913.1|CD663913 UCRHV18_07ac10_b1 Drought-stressed D... 62 1e-029
gb|BU970982.1|BU970982 HB16E06r BC Hordeum vulgare subsp. v... 57 1e-029
gb|BJ450092.1|BJ450092 BJ450092 K. Sato unpublished cDNA li... 60 2e-029
gb|BF259873.2|BF259873 HVSMEf0020H24f Hordeum vulgare seedl... 107 3e-029
gb|BI956419.1|BI956419 HVSMEn0003E03f Hordeum vulgare rachi... 129 3e-029
gb|BF629357.2|BF629357 HVSMEb0010P10f Hordeum vulgare seedl... 68 4e-029
gb|DW474948.1|DW474948 25-u184 Subtracted libraries from ep... 58 4e-029
gb|CD662706.1|CD662706 UCRHV18_02dd10_b1 Drought-stressed D... 80 5e-029
gb|BF628144.2|BF628144 HVSMEb0003E02f Hordeum vulgare seedl... 97 6e-029
gb|CA024256.1|CA024256 HZ48M21r HZ Hordeum vulgare subsp. v... 90 7e-029
gb|BE216561.2|BE216561 HV_CEb0010N04f Hordeum vulgare seedl... 110 1e-028
gb|CA031182.1|CA031182 HX09D22r HX Hordeum vulgare subsp. v... 63 2e-028
gb|CB875733.1|CB875733 HX09D04w HX Hordeum vulgare subsp. v... 127 2e-028
gb|CA030901.1|CA030901 HX08H10r HX Hordeum vulgare subsp. v... 107 2e-028
gb|BU971391.1|BU971391 HB17H15r BC Hordeum vulgare subsp. v... 99 2e-028
gb|AL510470.1|AL510470 AL510470 Hordeum vulgare Barke devel... 77 2e-028
gb|AV836940.1|AV836940 AV836940 K. Sato unpublished cDNA li... 127 2e-028
gb|BF254320.2|BF254320 HVSMEf0003K06f Hordeum vulgare seedl... 76 4e-028
gb|AF085164.1|AF085164 Hordeum vulgare receptor-like kinase... 55 4e-028
gb|BG344214.1|BG344214 HVSMEg0008C18f Hordeum vulgare pre-a... 79 6e-028
gb|BG418711.1|BG418711 HVSMEk0024B15f Hordeum vulgare testa... 84 1e-027
gb|BQ464037.1|BQ464037 HF01C21T HF Hordeum vulgare subsp. v... 124 1e-027
gb|BF621830.2|BF621830 HVSMEa0001A21f Hordeum vulgare seedl... 79 1e-027
gb|BQ462615.1|BQ462615 HI01H17T HI Hordeum vulgare subsp. v... 77 2e-027
gb|BI777582.2|BI777582 EBro04_SQ001_K14_R root, 3 week, sal... 123 3e-027
gb|CA005358.1|CA005358 HU10P21u HU Hordeum vulgare subsp. v... 123 3e-027
gb|CA021794.1|CA021794 HZ41C07r HZ Hordeum vulgare subsp. v... 79 5e-027
gb|BJ470520.1|BJ470520 BJ470520 K. Sato unpublished cDNA li... 118 6e-027
gb|AV910535.1|AV910535 AV910535 K. Sato unpublished cDNA li... 71 7e-027
gb|BF260965.2|BF260965 HVSMEf0023G13f Hordeum vulgare seedl... 108 8e-027
gb|BE060551.2|BE060551 HVSMEg0012J19f Hordeum vulgare pre-a... 53 1e-026
gb|BQ762470.1|BQ762470 EBro01_SQ005_O20 _R root, 3 week, hy... 121 1e-026
gb|BQ764029.1|BQ764029 EBro03_SQ006_G03_R root, 3 week, wat... 121 1e-026
gb|BM101152.2|BM101152 EBpi01_SQ003_A16_R pistil, 1 DPA, no... 87 1e-026
gb|BQ758677.1|BQ758677 EBma07_SQ002_B13_R maternal, 21 DPA,... 63 1e-026
gb|BQ764995.1|BQ764995 EBca01_SQ005_A16_R carpel, pre-anthe... 89 2e-026
gb|BF258327.3|BF258327 HVSMEf0015G22f Hordeum vulgare seedl... 65 2e-026
gb|AV931729.1|AV931729 AV931729 K. Sato unpublished cDNA li... 120 3e-026
gb|CA020283.1|CA020283 HV14N17r HV Hordeum vulgare subsp. v... 74 3e-026
gb|BU984997.1|BU984997 HF05N06r HF Hordeum vulgare subsp. v... 76 3e-026
gb|BU984123.1|BU984123 HF03A23r HF Hordeum vulgare subsp. v... 76 3e-026
gb|BI953871.1|BI953871 HVSMEm0015C01f Hordeum vulgare green... 67 4e-026
gb|BM374347.2|BM374347 EBpi03_SQ003_G01_R pistil, 4 DPA, no... 97 4e-026
gb|CA018896.1|CA018896 HV09P14r HV Hordeum vulgare subsp. v... 53 5e-026
gb|AV919775.1|AV919775 AV919775 K. Sato unpublished cDNA li... 105 8e-026
gb|CA011695.1|CA011695 HT03E18r HT Hordeum vulgare subsp. v... 62 8e-026
gb|CK124220.1|CK124220 BES1824108a11 BES1824 Hordeum vulgar... 118 1e-025
gb|BF256991.2|BF256991 HVSMEf0011J01f Hordeum vulgare seedl... 63 1e-025
gb|BQ767048.1|BQ767048 EBro08_SQ007_E22_R root, 3 week, dro... 91 1e-025
gb|BI952975.1|BI952975 HVSMEm0008M21f Hordeum vulgare green... 62 2e-025
gb|AV927561.1|AV927561 AV927561 K. Sato unpublished cDNA li... 90 2e-025
gb|BU998735.1|BU998735 HI12A05r HI Hordeum vulgare subsp. v... 76 2e-025
gb|CA003517.1|CA003517 HS14L18r HS Hordeum vulgare subsp. v... 60 2e-025
gb|AV914683.1|AV914683 AV914683 K. Sato unpublished cDNA li... 104 2e-025
gb|CD663430.1|CD663430 UCRHV18_05bh04_b1 Drought-stressed D... 65 2e-025
gb|BG415111.1|BG415111 HVSMEk0005D06f Hordeum vulgare testa... 79 2e-025
gb|AU252274.1|AU252274 AU252274 salt-stressed barley root c... 116 2e-025
gb|AU252281.1|AU252281 AU252281 salt-stressed barley root c... 116 2e-025
gb|AF474072.1| Hordeum vulgare sp. vulgare cultivar Morex B... 65 3e-025
gb|BM442854.2|BM442854 EBro02_SQ001_J04_R root, 3 week, hyd... 91 5e-025
gb|BQ765308.1|BQ765308 EBro03_SQ006_F20_R root, 3 week, wat... 91 5e-025
gb|BU989313.1|BU989313 HF21G08r HF Hordeum vulgare subsp. v... 69 5e-025
gb|BU980696.1|BU980696 HA21G18r HA Hordeum vulgare subsp. v... 81 5e-025
gb|BU980799.1|BU980799 HA21L17r HA Hordeum vulgare subsp. v... 81 5e-025
gb|AV836502.1|AV836502 AV836502 K. Sato unpublished cDNA li... 88 7e-025
gb|BF260967.2|BF260967 HVSMEf0023G15f Hordeum vulgare seedl... 105 9e-025
gb|BF266592.2|BF266592 HV_CEa0015I18f Hordeum vulgare seedl... 93 9e-025
gb|CA013314.1|CA013314 HT08A12r HT Hordeum vulgare subsp. v... 79 1e-024
gb|BF617106.3|BF617106 HVSMEc0014J24f Hordeum vulgare seedl... 51 1e-024
gb|CA003661.1|CA003661 HS15C23r HS Hordeum vulgare subsp. v... 60 1e-024
gb|BJ447136.1|BJ447136 BJ447136 K. Sato unpublished cDNA li... 69 2e-024
gb|BJ446879.1|BJ446879 BJ446879 K. Sato unpublished cDNA li... 69 2e-024
gb|BM372170.2|BM372170 EBro03_SQ004_D12_R root, 3 week, wat... 79 2e-024
gb|BM443153.2|BM443153 EBro02_SQ002_M07_R root, 3 week, hyd... 73 2e-024
gb|BQ753294.1|BQ753294 EBan01_SQ001_F07_R anther, yellow st... 85 2e-024
gb|AV833368.1|AV833368 AV833368 K. Sato unpublished cDNA li... 113 2e-024
gb|AV837061.1|AV837061 AV837061 K. Sato unpublished cDNA li... 113 3e-024
gb|AV930473.1|AV930473 AV930473 K. Sato unpublished cDNA li... 113 3e-024
gb|BG418799.1|BG418799 HVSMEk0024H19f Hordeum vulgare testa... 112 4e-024
gb|AV836865.1|AV836865 AV836865 K. Sato unpublished cDNA li... 85 4e-024
gb|AV836793.1|AV836793 AV836793 K. Sato unpublished cDNA li... 78 5e-024
gb|BQ762476.1|BQ762476 EBro01_SQ005_P23 _R root, 3 week, hy... 48 6e-024
gb|BG300180.2|BG300180 HVSMEb0010M14f Hordeum vulgare seedl... 67 6e-024
gb|BG414353.2|BG414353 HVSMEk0001M01f Hordeum vulgare testa... 67 6e-024
gb|BJ462433.1|BJ462433 BJ462433 K. Sato unpublished cDNA li... 98 6e-024
gb|BU986512.1|BU986512 HF12B10r HF Hordeum vulgare subsp. v... 78 8e-024
gb|BU968747.1|BU968747 HB08H10r BC Hordeum vulgare subsp. v... 111 1e-023
gb|BI776309.2|BI776309 EBem04_SQ001_I07_R embryo, 12 DPA, n... 69 1e-023
gb|BJ453536.1|BJ453536 BJ453536 K. Sato unpublished cDNA li... 101 1e-023
gb|BU968522.1|BU968522 HB07M17r BC Hordeum vulgare subsp. v... 111 2e-023
gb|BU986612.1|BU986612 HF12G11r HF Hordeum vulgare subsp. v... 111 2e-023
gb|BJ471768.1|BJ471768 BJ471768 K. Sato unpublished cDNA li... 56 2e-023
gb|AV932635.1|AV932635 AV932635 K. Sato unpublished cDNA li... 72 2e-023
gb|AV924319.1|AV924319 AV924319 K. Sato unpublished cDNA li... 101 2e-023
gb|AV929413.1|AV929413 AV929413 K. Sato unpublished cDNA li... 101 2e-023
gb|BM444583.1|BM444583 EBem09_SQ005_M19_R embryo, 1 Day ger... 64 3e-023
gb|AV916577.1|AV916577 AV916577 K. Sato unpublished cDNA li... 70 3e-023
gb|BU984506.1|BU984506 HF04C02r HF Hordeum vulgare subsp. v... 68 3e-023
gb|BE060512.3|BE060512 HVSMEg0012I03f Hordeum vulgare pre-a... 84 4e-023
gb|AV836552.1|AV836552 AV836552 K. Sato unpublished cDNA li... 66 4e-023
gb|BI951471.1|BI951471 HVSMEm0001A20f Hordeum vulgare green... 63 5e-023
gb|AL504247.1|AL504247 AL504247 Hordeum vulgare Barke roots... 61 5e-023
gb|BM098115.2|BM098115 EBpi03_SQ002_J13_R pistil, 4 DPA, no... 61 5e-023
gb|BI959898.1|BI959898 HVSMEn0022E20f Hordeum vulgare rachi... 63 7e-023
gb|AV924450.1|AV924450 AV924450 K. Sato unpublished cDNA li... 62 7e-023
gb|CA027170.1|CA027170 HZ58B16r HZ Hordeum vulgare subsp. v... 108 8e-023
gb|AU252279.2|AU252279 AU252279 salt-stressed barley root c... 108 8e-023
gb|BF625766.2|BF625766 HVSMEa0013I14f Hordeum vulgare seedl... 65 1e-022
gb|AJ582219.1|AJ582219 AJ582219 Hordeum vulgare subsp. vulg... 79 1e-022
gb|AV930414.1|AV930414 AV930414 K. Sato unpublished cDNA li... 92 1e-022
gb|AF509747.1| Hordeum vulgare subsp. vulgare stem rust res... 59 2e-022
gb|AY115550.1| Hordeum vulgare subsp. vulgare stem rust res... 59 2e-022
gb|BE216563.3|BE216563 HV_CEb0010N06f Hordeum vulgare seedl... 75 2e-022
gb|CK123885.1|CK123885 BES1824105o18 BES1824 Hordeum vulgar... 61 2e-022
gb|BI952328.1|BI952328 HVSMEm0005P11f Hordeum vulgare green... 81 2e-022
gb|CB878070.1|CB878070 HP07D18T HP Hordeum vulgare subsp. v... 81 2e-022
gb|BE216768.2|BE216768 HV_CEb0011I04f Hordeum vulgare seedl... 107 2e-022
gb|CA023853.1|CA023853 HZ47J17r HZ Hordeum vulgare subsp. v... 107 2e-022
gb|CA024475.1|CA024475 HZ49G15r HZ Hordeum vulgare subsp. v... 48 2e-022
gb|CA024753.1|CA024753 HZ50D08r HZ Hordeum vulgare subsp. v... 79 3e-022
gb|CA008272.1|CA008272 HU10H03r HU Hordeum vulgare subsp. v... 66 3e-022
gb|AU252264.1|AU252264 AU252264 salt-stressed barley root c... 91 3e-022
gb|BE438069.1|BE438069 SFR010.E06F990519 ITEC SFR Barley Le... 106 4e-022
gb|BM097640.2|BM097640 EBem04_SQ002_E16_R embryo, 12 DPA, n... 54 6e-022
gb|BM101004.2|BM101004 EBpi01_SQ002_J03_R pistil, 1 DPA, no... 78 9e-022
gb|BI959662.1|BI959662 HVSMEn0020K15f Hordeum vulgare rachi... 57 1e-021
gb|BU983256.1|BU983256 HA29B10r HA Hordeum vulgare subsp. v... 72 1e-021
gb|BU988481.1|BU988481 HF17M10r HF Hordeum vulgare subsp. v... 52 1e-021
gb|BI778695.2|BI778695 EBro01_SQ001_C01_R root, 3 week, hyd... 70 1e-021
gb|BM441777.2|BM441777 EBed07_SQ001_I12_R endosperm, 28 DPA... 70 2e-021
gb|AV923555.1|AV923555 AV923555 K. Sato unpublished cDNA li... 79 2e-021
gb|CA028096.1|CA028096 HZ60P18r HZ Hordeum vulgare subsp. v... 63 2e-021
gb|CA007303.1|CA007303 HU07H17r HU Hordeum vulgare subsp. v... 45 2e-021
gb|CA003563.1|CA003563 HS14N23r HS Hordeum vulgare subsp. v... 93 2e-021
gb|BJ455194.1|BJ455194 BJ455194 K. Sato unpublished cDNA li... 103 2e-021
gb|BQ472370.1|BQ472370 HB09M17T BC Hordeum vulgare subsp. v... 103 2e-021
gb|BJ474992.1|BJ474992 BJ474992 K. Sato unpublished cDNA li... 102 5e-021
gb|BF065248.2|BF065248 HV_CEb0024K03f Hordeum vulgare seedl... 50 5e-021
gb|BI960328.1|BI960328 HVSMEn0024D23f Hordeum vulgare rachi... 53 6e-021
gb|BU973230.1|BU973230 HB24D05r BC Hordeum vulgare subsp. v... 62 6e-021
gb|BQ465888.1|BQ465888 HU04P13r HU Hordeum vulgare subsp. v... 43 6e-021
gb|BF629255.2|BF629255 HVSMEb0010I11f Hordeum vulgare seedl... 55 7e-021
gb|AF305912.1|AF305912 Hordeum vulgare EDR1 (EDR1) mRNA, co... 60 7e-021
gb|BQ466575.1|BQ466575 HT02O23r HT Hordeum vulgare subsp. v... 75 8e-021
gb|CB875711.1|CB875711 HX09C02w HX Hordeum vulgare subsp. v... 101 9e-021
>gb|BF263242.2|BF263242 HV_CEa0006D16f Hordeum vulgare seedling green leaf EST library
HVcDNA0004 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEa0006D16f, mRNA sequence
Length = 910
Score = 379 bits (821), Expect = e-104
Identities = 151/222 (68%), Positives = 183/222 (82%)
Frame = -1 / +2
Query: 1463 AFTLFELETITKSFRVDYVLGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKDGHQGHR 1284
+F+L EL +T F Y+LGEGGFG V+KG++D +R GL+ PVAVK LN GHQGHR
Sbjct: 95 SFSLSELRGVTHDFSTGYLLGEGGFGAVHKGFVDAGMRPGLEPQPVAVKQLNIAGHQGHR 274
Query: 1283 EWLTEVNCLGQLRHPNLVKLIGYCCEDDHRLLVYEFMFRGSLENHLFRKTATPLPWGTRM 1104
EWL EV LGQ RH +L+KL+GYCC+D+ RLLVYEFM RGSL+NHLF++ + LPW TR+
Sbjct: 275 EWLAEVIFLGQFRHQHLLKLLGYCCQDEERLLVYEFMPRGSLDNHLFKRISATLPWCTRL 454
Query: 1103 SIALGAAKGLACLHNAQRPVIYRDFKTSNILLDSDYTAKLSDFGLAKDGPEGDQTHVSTR 924
+A+GAAKG+A LH ++PVIYRD K NILLDSDYTAKLSDFGLAK GPEG++THVSTR
Sbjct: 455 KVAIGAAKGVAFLHGGKQPVIYRDLKAXNILLDSDYTAKLSDFGLAKMGPEGEETHVSTR 634
Query: 923 VMGTYGYAAPEYVMTGHLTARSDVYSFGVVLLELLTGRKSID 798
VMGT+GYAAPEYV TGHL +SDVYSFGVVLLELLTGR++++
Sbjct: 635 VMGTHGYAAPEYVQTGHLQVKSDVYSFGVVLLELLTGRRAME 760
Score = 203 bits (437), Expect = 3e-051
Identities = 95/161 (59%), Positives = 107/161 (66%)
Frame = +1 / -2
Query: 799 SIDLRPVRSSSRTTPKLYTSLRAVK*PVITYSGAA*P*VPITRVDTCV*SPSGPSFARPK 978
S+ RPVRSSS TTPKLYTSL + PV TYSGAA*P VPITRV TCV SPSGP A PK
Sbjct: 759 SMARRPVRSSSSTTPKLYTSLFTCRWPVCTYSGAA*PCVPITRVLTCVSSPSGPILASPK 580
Query: 979 SDSLAV*SESSRMFDVLKSL*MTGL*ALWRQASPLAAPSAIDILVPQGNGVAVFRNKWFS 1158
SDS AV*SES RM KS *MTG WR+A+PLAAP A LV G+ + +W S
Sbjct: 579 SDSFAV*SESRRMLXAFKSR*MTGCLPPWRKATPLAAPMATLSLVHHGSVADILLKRWLS 400
Query: 1159 RLPRNMNXXXXXXXXXXQQYPINFTKFGCLNCPRQLTSVSH 1281
RLPR MN QQYP +F++ C NCPR++TS SH
Sbjct: 399 RLPRGMNS*TSSRSSSWQQYPSSFSRCWCRNCPRKITSASH 277
Score = 156 bits (336), Expect = 2e-037
Identities = 79/218 (36%), Positives = 124/218 (56%)
Frame = +3 / -1
Query: 810 APRQELQQDHAEAVHVTPSSQVTGHHIFRGSITVGSHHPCRHMRLITFRAIFCEAKVRQF 989
A RQELQQ HAEAVHV QV H+ R + V +HHP H+RL+ R+ +++V Q
Sbjct: 748 AARQELQQHHAEAVHVALHLQVARLHVLRRRVAVRAHHPRAHVRLLPLRSHLGQSEV*QL 569
Query: 990 GSIIGVQQNV*CLEISVDDGPLSVVEASEPFSGSQRD*HPSTPGQWRSCLSE*VVF*TSS 1169
+IGV+++V L+I VDDG L+ +E + G+ + PS P Q E VV ++
Sbjct: 568 RRVIGVEEDVXGLQIPVDDGLLAAMEEGDALGGADGNLEPSAPRQRGRYPFEEVVVEAAA 389
Query: 1170 KHELVDKQPMVIFAAISDQLHQIWMPQLPQAVNLGKPFSVPLMSIFVEHLDCNRQ*LQPN 1349
+HELVD+QP+++ AA+ QL Q+ +P+LP+ +L +P V L++ VE L + L+
Sbjct: 388 RHELVDEQPLLVLAAVPKQLQQVLVPELPKEDHLREPLPVALVAGDVELLHGDGLGLEAG 209
Query: 1350 PDIFIYVTLVNGPKSSFAKNIINTEALCDCL*LKQCEG 1463
+ LV+G + + + + E + D L + EG
Sbjct: 208 AHAGVDEALVDGAEPALPEEVAGGEVVRDAAELAEAEG 95
>gb|DQ352178.1| Hordeum vulgare subsp. vulgare rust resistance gene ABC1041 (ABC1041)
gene, complete cds
Length = 8735
Score = 134 bits (287), Expect(7) = e-101
Identities = 56/101 (55%), Positives = 72/101 (71%)
Frame = -1 / +2
Query: 881 TGHLTARSDVYSFGVVLLELLTGRKSIDKSRPSREQSLVDWALPKLNDKRRLLQIIDPRL 702
TGHLTA+SD+YSFGVVLLE+L+GR++IDK+RP E +LV+WA P L KR++ +++D RL
Sbjct: 5978 TGHLTAKSDIYSFGVVLLEMLSGRRAIDKNRPQGEHNLVEWARPYLTHKRKIFRVLDTRL 6157
Query: 701 EGQYSARAAHKSCSLAFYCLSQNPKARPLMSDVVETLAPLQ 579
EGQYS A +LA CLS K RP M VV L +Q
Sbjct: 6158 EGQYSLNGAQTIAALAVECLSFEAKMRPSMEAVVSILEGIQ 6280
Score = 95.5 bits (202), Expect(7) = e-101
Identities = 37/44 (84%), Positives = 42/44 (95%)
Frame = -1 / +1
Query: 1001 DYTAKLSDFGLAKDGPEGDQTHVSTRVMGTYGYAAPEYVMTGHL 870
DYTAKLSDFGLAKDGP G+++HVSTRVMGTYGYAAPEY+ TG+L
Sbjct: 5407 DYTAKLSDFGLAKDGPVGEKSHVSTRVMGTYGYAAPEYLSTGNL 5538
Score = 83.5 bits (176), Expect(7) = e-101
Identities = 35/44 (79%), Positives = 37/44 (84%)
Frame = -1 / +3
Query: 1271 EVNCLGQLRHPNLVKLIGYCCEDDHRLLVYEFMFRGSLENHLFR 1140
EVN LGQ H NLVKLIGYC ED++RLLVYE M RGSLENHLFR
Sbjct: 4929 EVNYLGQFCHQNLVKLIGYCLEDEYRLLVYECMPRGSLENHLFR 5060
Score = 76.2 bits (160), Expect(7) = e-101
Identities = 31/42 (73%), Positives = 35/42 (83%)
Frame = -1 / +3
Query: 1127 PLPWGTRMSIALGAAKGLACLHNAQRPVIYRDFKTSNILLDS 1002
PL W RM +ALGAAKGLA LH+A+ VIYRDFKTSNILLD+
Sbjct: 5193 PLSWNLRMKVALGAAKGLAYLHSAEAKVIYRDFKTSNILLDT 5318
Score = 76.2 bits (160), Expect(4) = 5e-035
Identities = 45/101 (44%), Positives = 55/101 (54%)
Frame = +1 / -3
Query: 580 CNGARVSTTSLMSGLAFGFWLRQ*NARLQDL*AALAEYCPSSLGSMIWRSLLLSLSFGSA 759
C +R+ TT+ M GL R A + A +EY PSSL S L L + +G A
Sbjct: 6279 CIPSRIETTASMDGLILASKDRHSTASAAIVCAPFSEYWPSSLVSRTRNILRLCVRYGRA 6100
Query: 760 QSTRLCSLLGRDLSIDLRPVRSSSRTTPKLYTSLRAVK*PV 882
STRLCS GR LS+ RP S+ TTPKL SL AV+ PV
Sbjct: 6099 HSTRLCSPWGRFLSMARRPDSISNSTTPKL*MSLLAVRWPV 5977
Score = 65.2 bits (136), Expect(4) = 5e-035
Identities = 31/42 (73%), Positives = 34/42 (80%)
Frame = +1 / -1
Query: 877 PVITYSGAA*P*VPITRVDTCV*SPSGPSFARPKSDSLAV*S 1002
PV YSGAA*P VPIT VDT + SP+GPSFA PKS+S AV*S
Sbjct: 5531 PVDRYSGAA*PYVPITLVDT*LFSPTGPSFANPKSESFAV*S 5406
Score = 58.3 bits (121), Expect(7) = e-101
Identities = 28/62 (45%), Positives = 37/62 (59%)
Frame = -1 / +3
Query: 1541 SSDISDPSTPRKVEDAKNISIYNDVIAFTLFELETITKSFRVDYVLGEGGFGTVYKGYID 1362
SS S S P + I +V F+ +L T++FR D VLGEGGFG+VYKG+ID
Sbjct: 4389 SSRASSASMPPSAKTECEILQSANVKVFSYNDLRLATRNFRPDSVLGEGGFGSVYKGWID 4568
Query: 1361 EN 1356
E+
Sbjct: 4569 EH 4574
Score = 41.4 bits (84), Expect(4) = 5e-035
Identities = 18/40 (45%), Positives = 23/40 (57%)
Frame = +1 / -2
Query: 1153 FSRLPRNMNXXXXXXXXXXQQYPINFTKFGCLNCPRQLTS 1272
FS+LPR M+ +QYPI+ T+F N PR LTS
Sbjct: 5047 FSKLPRGMHSYTSSRYSSSKQYPISLTRF*WQN*PR*LTS 4928
Score = 40.9 bits (83), Expect(7) = e-101
Identities = 15/23 (65%), Positives = 18/23 (78%)
Frame = -1 / +3
Query: 1334 LPVAVKVLNKDGHQGHREWLTEV 1266
+PVAVK LN +G QGHREWL +
Sbjct: 4605 IPVAVKRLNLEGLQGHREWLVSI 4673
Score = 40.0 bits (81), Expect(4) = 5e-035
Identities = 23/35 (65%), Positives = 25/35 (71%)
Frame = +1 / -2
Query: 1006 SSRMFDVLKSL*MTGL*ALWRQASPLAAPSAIDIL 1110
S R+ DVLKSL*+T AL R ASP AAPSA IL
Sbjct: 5314 SRRILDVLKSL*ITLASAL*R*ASPFAAPSATFIL 5210
Score = 25.4 bits (49), Expect(7) = e-101
Identities = 13/30 (43%), Positives = 15/30 (50%)
Frame = -1 / +2
Query: 527 RRRLTGNSVVHFRAIPNPKCTPVVPACRVR 438
RRR S RA P+ TP VP+C R
Sbjct: 7061 RRRR*RRSSTGRRAPPSSPWTPSVPSCSAR 7150
>gb|BJ462905.1|BJ462905 BJ462905 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags24n16 5', mRNA sequence
Length = 634
Score = 250 bits (541), Expect(3) = 3e-094
Identities = 98/135 (72%), Positives = 121/135 (89%)
Frame = -1 / +3
Query: 1058 AQRPVIYRDFKTSNILLDSDYTAKLSDFGLAKDGPEGDQTHVSTRVMGTYGYAAPEYVMT 879
A+RPVIYRDFKTSNILLD++Y AKLSDFGLAKDGPEGD+THVSTRVMGTYGYAAPEYVMT
Sbjct: 222 AERPVIYRDFKTSNILLDAEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMT 401
Query: 878 GHLTARSDVYSFGVVLLELLTGRKSIDKSRPSREQSLVDWALPKLNDKRRLLQIIDPRLE 699
GHLT++SDVYSFGVVLLE+++GR+S+DK+RP+ E +LV+WA P L ++RR +++DPRLE
Sbjct: 402 GHLTSKSDVYSFGVVLLEMMSGRRSMDKNRPNGEHNLVEWARPYLGERRRFYRLVDPRLE 581
Query: 698 GQYSARAAHKSCSLA 654
G +S + A K+ LA
Sbjct: 582 GNFSIKGAQKTAQLA 626
Score = 150 bits (322), Expect(3) = 2e-047
Identities = 79/127 (62%), Positives = 88/127 (69%)
Frame = +1 / -1
Query: 673 *AALAEYCPSSLGSMIWRSLLLSLSFGSAQSTRLCSLLGRDLSIDLRPVRSSSRTTPKLY 852
*A E PS GS + LLS G A STRLCS G LSIDL P S TTPKLY
Sbjct: 607 *APFMEKFPSRRGSTSL*NRLLSPR*GRAHSTRLCSPFGLFLSIDLLPDIISRSTTPKLY 428
Query: 853 TSLRAVK*PVITYSGAA*P*VPITRVDTCV*SPSGPSFARPKSDSLAV*SESSRMFDVLK 1032
TSL V+*PV+TYSGAA P VP+TRVDTCV SPSGPSFA PKS+S A+ S S R+F+VLK
Sbjct: 427 TSLFDVR*PVMTYSGAAYPYVPMTRVDTCVLSPSGPSFASPKSESFALYSASKRIFEVLK 248
Query: 1033 SL*MTGL 1053
S +TGL
Sbjct: 247 SRYITGL 227
Score = 90.0 bits (190), Expect(3) = 3e-094
Identities = 35/48 (72%), Positives = 42/48 (87%)
Frame = -1 / +3
Query: 1277 LTEVNCLGQLRHPNLVKLIGYCCEDDHRLLVYEFMFRGSLENHLFRKT 1134
+ EV+ LG L+HP+LVKL+GYC EDD RLLVYEFM RGSLENHLFR++
Sbjct: 3 VAEVDFLGNLQHPHLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRRS 146
Score = 85.8 bits (181), Expect(2) = 4e-022
Identities = 40/98 (40%), Positives = 59/98 (60%)
Frame = +3 / -3
Query: 765 HQALLPAGPRLVDRLAPRQELQQDHAEAVHVTPSSQVTGHHIFRGSITVGSHHPCRHMRL 944
+Q +LP P LV R + L + H++ V++ QVT H I R I+V SH P +M L
Sbjct: 515 NQIVLPVWPVLVHRPSA*HHL*EHHSKTVYIAL*CQVTCHDILRSCISVCSHDPSGYMCL 336
Query: 945 ITFRAIFCEAKVRQFGSIIGVQQNV*CLEISVDDGPLS 1058
IT RAIFC++K+R+F + +Q+N+* EI + P S
Sbjct: 335 ITLRAIFCKSKIREFCIVFRIQKNI*SFEIPIYHWPFS 222
Score = 47.3 bits (97), Expect(3) = 2e-047
Identities = 18/44 (40%), Positives = 24/44 (54%)
Frame = +1 / -1
Query: 1147 KWFSRLPRNMNXXXXXXXXXXQQYPINFTKFGCLNCPRQLTSVS 1278
+WFS+LPR +N Q P NFT+ GC PR+ TS +
Sbjct: 133 RWFSKLPRGINSYTSNRWSSSMQ*PTNFTRCGC*RFPRKSTSAT 2
Score = 45.5 bits (93), Expect(3) = 3e-094
Identities = 18/22 (81%), Positives = 18/22 (81%)
Frame = -1 / +3
Query: 1127 PLPWGTRMSIALGAAKGLACLH 1062
PLPW RM IALGAAKGLA LH
Sbjct: 150 PLPWAIRMKIALGAAKGLAFLH 215
Score = 40.0 bits (81), Expect(2) = 4e-022
Identities = 16/42 (38%), Positives = 29/42 (69%)
Frame = +3 / -3
Query: 1143 E*VVF*TSSKHELVDKQPMVIFAAISDQLHQIWMPQLPQAVN 1268
E +V TS+ H+ V QP+VIF A+++Q H +WM ++ + ++
Sbjct: 137 EKMVLQTSAGHKFVY*QPLVIFNAVTNQFH*VWMLKVSKEID 12
Score = 31.3 bits (62), Expect(3) = 2e-047
Identities = 13/21 (61%), Positives = 15/21 (71%)
Frame = +1 / -1
Query: 1066 RQASPLAAPSAIDILVPQGNG 1128
R A P AAPSAI IL+ G+G
Sbjct: 211 RNARPFAAPSAIFILIAHGSG 149
>gb|BQ470244.1|BQ470244 HX02D24r HX Hordeum vulgare subsp. vulgare cDNA clone HX02D24
5-PRIME, mRNA sequence
Length = 606
Score = 328 bits (711), Expect = 5e-089
Identities = 131/196 (66%), Positives = 163/196 (83%)
Frame = -1 / +2
Query: 1229 KLIGYCCEDDHRLLVYEFMFRGSLENHLFRKTATPLPWGTRMSIALGAAKGLACLHNAQR 1050
+LIGYC + D+RLLVYEFM +GSLENHLFR+ A PL WG R+ +A+GAAKGL+ LH+A+
Sbjct: 8 RLIGYCSDGDNRLLVYEFMPKGSLENHLFRRGADPLSWGIRLKVAIGAAKGLSFLHHAEN 187
Query: 1049 PVIYRDFKTSNILLDSDYTAKLSDFGLAKDGPEGDQTHVSTRVMGTYGYAAPEYVMTGHL 870
VIYRDFK SNILLDS++ AKLSDFGLAK GP GD+THVST+VMGT+GYAAPEY+ TG L
Sbjct: 188 QVIYRDFKASNILLDSEFNAKLSDFGLAKAGPTGDKTHVSTQVMGTHGYAAPEYIATGRL 367
Query: 869 TARSDVYSFGVVLLELLTGRKSIDKSRPSREQSLVDWALPKLNDKRRLLQIIDPRLEGQY 690
+A++DVYSFGVVLLELLTGR+++DKS+P EQ+LVDWA P L DKRRL +++D +L GQY
Sbjct: 368 SAKADVYSFGVVLLELLTGRRALDKSKPGIEQNLVDWAKPHLRDKRRLYRVMDTKLGGQY 547
Query: 689 SARAAHKSCSLAFYCL 642
+ AH +LA C+
Sbjct: 548 PKKGAHAVANLALQCI 595
Score = 165 bits (355), Expect = 6e-040
Identities = 94/191 (49%), Positives = 108/191 (56%)
Frame = +1 / -1
Query: 655 ARLQDL*AALAEYCPSSLGSMIWRSLLLSLSFGSAQSTRLCSLLGRDLSIDLRPVRSSSR 834
AR A Y P S SM SL LS G AQSTR CS+ G DLS PV SSS
Sbjct: 582 ARFATACAPFLGYWPPSFVSMTRYSLRLSRRCGLAQSTRFCSMPGFDLSRARLPVSSSSN 403
Query: 835 TTPKLYTSLRAVK*PVITYSGAA*P*VPITRVDTCV*SPSGPSFARPKSDSLAV*SESSR 1014
TTPKL TS A + PV YSGAA P VPIT V+T V SP GP+FA PKS+S A+ SES R
Sbjct: 402 TTPKL*TSALAERRPVAIYSGAAYPWVPITCVET*VLSPVGPAFANPKSESFALNSESRR 223
Query: 1015 MFDVLKSL*MTGL*ALWRQASPLAAPSAIDILVPQGNGVAVFRNKWFSRLPRNMNXXXXX 1194
MFD LKS +T A + PLAAP A L+P G A N+ FS+LP MN
Sbjct: 222 MFDALKSRYITWFSA*CKNDKPLAAPIATLSLIPHDKGSAPLLNR*FSKLPLGMNSYTRS 43
Query: 1195 XXXXXQQYPIN 1227
+Q P++
Sbjct: 42 LLSPSEQ*PMS 10
>gb|BM375323.2|BM375323 EBem06_SQ002_P23_R embryo, 21 DPA, no treatment, cv Optic, EBem06
Hordeum vulgare subsp. vulgare cDNA clone
EBem06_SQ002_P23 5', mRNA sequence
Length = 539
Score = 299 bits (648), Expect(3) = 5e-087
Identities = 125/134 (93%), Positives = 128/134 (95%)
Frame = -1 / +3
Query: 980 DFGLAKDGPEGDQTHVSTRVMGTYGYAAPEYVMTGHLTARSDVYSFGVVLLELLTGRKSI 801
DFGLAK GPEGD+THVSTRVMGTYGYAAPEYVMTGHLTARSDVYSFGVVLLELLTGRKSI
Sbjct: 3 DFGLAKAGPEGDETHVSTRVMGTYGYAAPEYVMTGHLTARSDVYSFGVVLLELLTGRKSI 182
Query: 800 DKSRPSREQSLVDWALPKLNDKRRLLQIIDPRLEGQYSARAAHKSCSLAFYCLSQNPKAR 621
DKSR SRE SLVDWA PKLNDKRRLLQIIDPRLEGQYS RAAHK+CSLA+YCLSQNPKAR
Sbjct: 183 DKSRSSREHSLVDWACPKLNDKRRLLQIIDPRLEGQYSVRAAHKACSLAYYCLSQNPKAR 362
Query: 620 PLMSDVVETLAPLQ 579
PLMSDVVETL PLQ
Sbjct: 363 PLMSDVVETLEPLQ 404
Score = 239 bits (517), Expect(2) = 2e-064
Identities = 111/137 (81%), Positives = 116/137 (84%)
Frame = +1 / -2
Query: 571 PPCCNGARVSTTSLMSGLAFGFWLRQ*NARLQDL*AALAEYCPSSLGSMIWRSLLLSLSF 750
P C+G+RVSTTSL+SGLA GFWLRQ* ARLQ L*AA EYCPSSLGSMIWRSLLLS S
Sbjct: 412 PGNCSGSRVSTTSLISGLALGFWLRQ*YARLQAL*AARTEYCPSSLGSMIWRSLLLSFSL 233
Query: 751 GSAQSTRLCSLLGRDLSIDLRPVRSSSRTTPKLYTSLRAVK*PVITYSGAA*P*VPITRV 930
G AQSTRLCSLL RDLS+DLRPV SS RTTPKL TSL AVK PVITYSGAA*P VPIT V
Sbjct: 232 GQAQSTRLCSLLDRDLSMDLRPVSSSRRTTPKL*TSLLAVKWPVITYSGAA*PYVPITLV 53
Query: 931 DTCV*SPSGPSFARPKS 981
DT V SPSGP+FA PKS
Sbjct: 52 DTWVSSPSGPAFASPKS 2
Score = 109 bits (233), Expect(3) = 5e-036
Identities = 47/72 (65%), Positives = 58/72 (80%)
Frame = +3 / -1
Query: 765 HQALLPAGPRLVDRLAPRQELQQDHAEAVHVTPSSQVTGHHIFRGSITVGSHHPCRHMRL 944
HQA+LPAGP LV+ LAPRQ+LQ+D A+AV +T SSQV GHHIFRGSIT+ SHH R+M L
Sbjct: 218 HQAVLPAGP*LVNGLAPRQQLQKDDAKAVDITSSSQVAGHHIFRGSITICSHHSRRYMGL 39
Query: 945 ITFRAIFCEAKV 980
ITF + F + +V
Sbjct: 38 ITFWSSFRQPEV 3
Score = 83.5 bits (176), Expect(3) = 2e-037
Identities = 36/48 (75%), Positives = 38/48 (79%)
Frame = -3 / +2
Query: 738 QEEAPPDHRPEAGGAVLGQSRSQVLQPRVLLPEPEPKGQAAHERRRRD 595
QEEA PDHRPEAG AVLG SQ LQP VLLPEPEP+G+AA ERR D
Sbjct: 245 QEEASPDHRPEAGRAVLGPGGSQSLQPGVLLPEPEPQGEAADERRGGD 388
Score = 83.5 bits (176), Expect(3) = 2e-037
Identities = 36/56 (64%), Positives = 41/56 (73%)
Frame = -3 / +2
Query: 960 WP*R*SDACVDTGDGNLRLCCP*ICDDRSLDCSE*RVQLRRGPAGAPDGAQVDRQV 793
W R* D C+D DGN+ LCCP*ICDDR LDC +* +QL R P+GA DGAQV QV
Sbjct: 23 WTRR**DPCIDESDGNIWLCCP*ICDDRPLDC*K*CLQLWRRPSGAADGAQVH*QV 190
Score = 58.8 bits (122), Expect(3) = 5e-036
Identities = 28/44 (63%), Positives = 31/44 (70%)
Frame = +3 / -1
Query: 579 LQRREGLDDVAHERPGLWVLAQAVEREAAGLVSGSGRVLPLQPR 710
LQ +GL VAH+RP L VLAQAV R+AA VS RVLP QPR
Sbjct: 404 LQWLKGLHHVAHQRPRLGVLAQAVVRQAASFVSRPDRVLPFQPR 273
Score = 36.8 bits (74), Expect(3) = 5e-087
Identities = 12/13 (92%), Positives = 13/13 (100%)
Frame = -1 / +3
Query: 500 VHFRAIPNPKCTP 462
VH+RAIPNPKCTP
Sbjct: 483 VHYRAIPNPKCTP 521
Score = 28.1 bits (55), Expect(3) = 2e-037
Identities = 8/13 (61%), Positives = 11/13 (84%)
Frame = -3 / +2
Query: 495 LQGHPQPQVHACC 457
LQGHP+P++H C
Sbjct: 488 LQGHPEPEMHPGC 526
Score = 28.1 bits (55), Expect(2) = 2e-064
Identities = 10/13 (76%), Positives = 10/13 (76%)
Frame = +1 / -2
Query: 463 GVHLGLGMALKWT 501
GVH G GMAL WT
Sbjct: 520 GVHFGFGMAL*WT 482
Score = 25.4 bits (49), Expect(3) = 5e-087
Identities = 10/15 (66%), Positives = 12/15 (80%)
Frame = -1 / +3
Query: 545 LPDCRGRRRLTGNSV 501
+PD R RRLTGN+V
Sbjct: 441 VPDYRIHRRLTGNNV 485
Score = 22.1 bits (42), Expect(3) = 5e-036
Identities = 8/20 (40%), Positives = 12/20 (60%)
Frame = +2 / -3
Query: 461 QACTWGWGWP*SGRRCCRSA 520
++C+ G GW S RC +A
Sbjct: 459 ESCSQGHGWTESLHRCPATA 400
>gb|BU998515.1|BU998515 HI11E21r HI Hordeum vulgare subsp. vulgare cDNA clone HI11E21
5-PRIME, mRNA sequence
Length = 671
Score = 171 bits (367), Expect(3) = 4e-086
Identities = 70/91 (76%), Positives = 78/91 (85%)
Frame = -1 / +1
Query: 1127 PLPWGTRMSIALGAAKGLACLHNAQRPVIYRDFKTSNILLDSDYTAKLSDFGLAKDGPEG 948
PL W RM IA GAAKGLA LH+ + VIYRDFKTSNILLD++Y AKLSDFGLAKDGP G
Sbjct: 397 PLSWNLRMKIAHGAAKGLAFLHSDKAKVIYRDFKTSNILLDANYDAKLSDFGLAKDGPTG 576
Query: 947 DQTHVSTRVMGTYGYAAPEYVMTGHLTARSD 855
D++HVSTRVMGTYGYAAPEY+ TGHLT +SD
Sbjct: 577 DKSHVSTRVMGTYGYAAPEYLATGHLTTKSD 669
Score = 127 bits (271), Expect(3) = 4e-086
Identities = 49/65 (75%), Positives = 57/65 (87%)
Frame = -1 / +1
Query: 1328 VAVKVLNKDGHQGHREWLTEVNCLGQLRHPNLVKLIGYCCEDDHRLLVYEFMFRGSLENH 1149
+AVK LN++ +QGHREWL EVN LGQL HPNLVKL+GYC ED+ RLLVYEFM RGSLENH
Sbjct: 190 IAVKKLNQESYQGHREWLAEVNYLGQLSHPNLVKLVGYCVEDEQRLLVYEFMPRGSLENH 369
Query: 1148 LFRKT 1134
LFR++
Sbjct: 370 LFRRS 384
Score = 104 bits (222), Expect(2) = 9e-033
Identities = 56/92 (60%), Positives = 63/92 (68%)
Frame = +1 / -1
Query: 853 TSLRAVK*PVITYSGAA*P*VPITRVDTCV*SPSGPSFARPKSDSLAV*SESSRMFDVLK 1032
TSL V+ PV YSGAA P VPIT VDT + SP GPSFARPKS+S A * S R+ +VLK
Sbjct: 671 TSLFVVRWPVARYSGAAYPYVPITLVDTWLLSPVGPSFARPKSESFAS*FASRRILEVLK 492
Query: 1033 SL*MTGL*ALWRQASPLAAPSAIDILVPQGNG 1128
S *MT +LWR ASP AAP AI I Q +G
Sbjct: 491 SR*MTLALSLWRNASPFAAPWAIFIRRFQESG 396
Score = 61.1 bits (127), Expect(3) = 4e-086
Identities = 25/38 (65%), Positives = 31/38 (81%)
Frame = -1 / +1
Query: 1472 DVIAFTLFELETITKSFRVDYVLGEGGFGTVYKGYIDE 1359
+V AFT EL T T++FR D VLGEGGFG+V+KG+IDE
Sbjct: 37 NVKAFTFNELRTATRNFRPDSVLGEGGFGSVFKGWIDE 150
Score = 57.0 bits (118), Expect(2) = 9e-033
Identities = 22/43 (51%), Positives = 26/43 (60%)
Frame = +1 / -1
Query: 1153 FSRLPRNMNXXXXXXXXXXQQYPINFTKFGCLNCPRQLTSVSH 1281
FS+LPR MN QYP +FT+FGC +CPR TS SH
Sbjct: 365 FSKLPRGMNS*TRSRCSSSTQYPTSFTRFGCDSCPR*FTSASH 237
>gb|BU987697.1|BU987697 HF15I03r HF Hordeum vulgare subsp. vulgare cDNA clone HF15I03
5-PRIME, mRNA sequence
Length = 588
Score = 255 bits (552), Expect(2) = 5e-084
Identities = 101/151 (66%), Positives = 126/151 (83%)
Frame = -1 / +1
Query: 1127 PLPWGTRMSIALGAAKGLACLHNAQRPVIYRDFKTSNILLDSDYTAKLSDFGLAKDGPEG 948
PL W RM +AL AA+GLA LH+ + VIYRDFKTSN+LLDS+Y AKLSDFGLAKDGP G
Sbjct: 136 PLSWNLRMKVALEAARGLAFLHSDEAKVIYRDFKTSNVLLDSEYNAKLSDFGLAKDGPSG 315
Query: 947 DQTHVSTRVMGTYGYAAPEYVMTGHLTARSDVYSFGVVLLELLTGRKSIDKSRPSREQSL 768
D++HVSTRVMGT GYAAPEY+ TGHLT +SDVY++GVVLLELLTG++++DK+RP + +L
Sbjct: 316 DKSHVSTRVMGTQGYAAPEYLATGHLTTKSDVYTYGVVLLELLTGQRALDKNRPPGQHNL 495
Query: 767 VDWALPKLNDKRRLLQIIDPRLEGQYSARAA 675
V+WA P +N KRR++ ++DPRL QYS AA
Sbjct: 496 VEWARPYINSKRRVIHVLDPRLXSQYSLPAA 588
Score = 145 bits (311), Expect(2) = 8e-041
Identities = 79/141 (56%), Positives = 94/141 (66%)
Frame = +1 / -2
Query: 676 AALAEYCPSSLGSMIWRSLLLSLSFGSAQSTRLCSLLGRDLSIDLRPVRSSSRTTPKLYT 855
AA +EYC + GS W +LLL L G A STRLC GR LS PV +S RTTP + T
Sbjct: 587 AAGSEYCDXNRGSRTWMTLLLLLM*GLAHSTRLCCPGGRFLSRARCPVSNSRRTTP*V*T 408
Query: 856 SLRAVK*PVITYSGAA*P*VPITRVDTCV*SPSGPSFARPKSDSLAV*SESSRMFDVLKS 1035
SL VK PV YSGAA P*VP+T V+T + SP GPSFA+PKS+S A+ SES R +VLKS
Sbjct: 407 SLFVVKWPVARYSGAAYP*VPMTLVET*LLSPLGPSFAKPKSESFALYSESRRTLEVLKS 228
Query: 1036 L*MTGL*ALWRQASPLAAPSA 1098
+T +L R+ASPLAA A
Sbjct: 227 RYITLASSLCRKASPLAASRA 165
Score = 77.1 bits (162), Expect(2) = 5e-084
Identities = 30/36 (83%), Positives = 33/36 (91%)
Frame = -1 / +1
Query: 1244 HPNLVKLIGYCCEDDHRLLVYEFMFRGSLENHLFRK 1137
HPNLVKLIGYC ED+ RLLVYEFM RGSLE+HLFR+
Sbjct: 13 HPNLVKLIGYCLEDEQRLLVYEFMPRGSLEHHLFRR 120
Score = 43.2 bits (88), Expect(2) = 8e-041
Identities = 14/36 (38%), Positives = 21/36 (58%)
Frame = +1 / -2
Query: 1147 KWFSRLPRNMNXXXXXXXXXXQQYPINFTKFGCLNC 1254
+W S+LP MN +QYP++FT+ GC +C
Sbjct: 110 RWCSKLPLGMNS*TRSRCSSSKQYPMSFTRLGCASC 3
>gb|BI959357.1|BI959357 HVSMEn0019F17f Hordeum vulgare rachis EST library HVcDNA0015 (normal)
Hordeum vulgare subsp. vulgare cDNA clone HVSMEn0019F17f,
mRNA sequence
Length = 656
Score = 240 bits (518), Expect(2) = 5e-083
Identities = 99/135 (73%), Positives = 118/135 (87%)
Frame = -1 / +3
Query: 1142 RKTATPLPWGTRMSIALGAAKGLACLHNAQRPVIYRDFKTSNILLDSDYTAKLSDFGLAK 963
++ + L TR++IA+GAAKGLA LH+A++PVIYRDFK SNILLDSD KLSDFGLAK
Sbjct: 159 KQVPSALAGSTRLNIAVGAAKGLAFLHDAEKPVIYRDFKGSNILLDSDKKPKLSDFGLAK 338
Query: 962 DGPEGDQTHVSTRVMGTYGYAAPEYVMTGHLTARSDVYSFGVVLLELLTGRKSIDKSRPS 783
DGPEGD THVSTRVMGT+GYAAPEY+MTGHLTA+SDVYSFGVVLLE+L+GR S+DK+RPS
Sbjct: 339 DGPEGDDTHVSTRVMGTHGYAAPEYIMTGHLTAKSDVYSFGVVLLEILSGRHSVDKTRPS 518
Query: 782 REQSLVDWALPKLND 738
REQ+LV++ P L D
Sbjct: 519 REQNLVEYPRPGLRD 563
Score = 175 bits (377), Expect(2) = 2e-052
Identities = 85/126 (67%), Positives = 92/126 (73%)
Frame = +1 / -2
Query: 724 RSLLLSLSFGSAQSTRLCSLLGRDLSIDLRPVRSSSRTTPKLYTSLRAVK*PVITYSGAA 903
R L SLS G STR CSLLGR LS + RP R SS TTPKLYTSL AV+ PV+ YSGAA
Sbjct: 577 RQLSGSLSPGRGYSTRFCSLLGRVLSTECRPERISSSTTPKLYTSLFAVRWPVMMYSGAA 398
Query: 904 *P*VPITRVDTCV*SPSGPSFARPKSDSLAV*SESSRMFDVLKSL*MTGL*ALWRQASPL 1083
*P VP+TRVDTCV SPSGPS A PKSDS SES RM + LKS *MTG A WR ASP
Sbjct: 397 *PWVPMTRVDTCVSSPSGPSLASPKSDSFGFLSESRRMLEPLKSR*MTGFSASWRNASPF 218
Query: 1084 AAPSAI 1101
AAP+A+
Sbjct: 217 AAPTAM 200
Score = 114 bits (244), Expect(2) = 2e-030
Identities = 49/122 (40%), Positives = 72/122 (59%)
Frame = +3 / -1
Query: 765 HQALLPAGPRLVDRLAPRQELQQDHAEAVHVTPSSQVTGHHIFRGSITVGSHHPCRHMRL 944
HQ LLPA P LV R+ ++LQQ H + VHV +V H + R + +G+H P RH+R+
Sbjct: 536 HQVLLPARPGLVHRVPAGEDLQQHHPKTVHVALRREVARHDVLRRRVAMGAHDPRRHVRV 357
Query: 945 ITFRAIFCEAKVRQFGSIIGVQQNV*CLEISVDDGPLSVVEASEPFSGSQRD*HPSTPGQ 1124
+ R + + +VRQ ++ V+++V LE++VDD L VVE EP G+ D P P Q
Sbjct: 356 VALRPVLGQPEVRQLRLLVRVEEDVGALEVAVDDRLLGVVEEREPLRGADGDVQPGRPRQ 177
Query: 1125 WR 1130
R
Sbjct: 176 RR 171
Score = 89.5 bits (189), Expect(2) = 5e-083
Identities = 35/50 (70%), Positives = 39/50 (78%)
Frame = -1 / +3
Query: 1286 REWLTEVNCLGQLRHPNLVKLIGYCCEDDHRLLVYEFMFRGSLENHLFRK 1137
+ W+ V LG LRHPNLV L+GYCCED HRLLVYE+M GSLENHLF K
Sbjct: 12 QRWVGGVIFLGHLRHPNLVNLVGYCCEDAHRLLVYEYMPNGSLENHLFVK 161
Score = 51.9 bits (107), Expect(2) = 2e-052
Identities = 19/45 (42%), Positives = 24/45 (53%)
Frame = +1 / -2
Query: 1147 KWFSRLPRNMNXXXXXXXXXXQQYPINFTKFGCLNCPRQLTSVSH 1281
+WFSRLP M QQ P FT+ GC CPR++T +H
Sbjct: 151 RWFSRLPLGMYSYTRRRWASSQQ*PTRFTRLGCRRCPRKITPPTH 17
Score = 38.6 bits (78), Expect(2) = 2e-030
Identities = 15/44 (34%), Positives = 28/44 (63%)
Frame = +3 / -1
Query: 1128 RSCLSE*VVF*TSSKHELVDKQPMVIFAAISDQLHQIWMPQLPQ 1259
R+ E VV + H LV ++ + + AA++ Q+HQ+ +P++PQ
Sbjct: 170 RNLFDEKVVLEAAVGHVLVHEEAVGVLAAVAHQIHQVGVPEVPQ 39
>gb|BQ764974.1|BQ764974 EBca01_SQ005_M12_R carpel, pre-anthesis, no treatment, cv Optic,
EBca01 Hordeum vulgare subsp. vulgare cDNA clone
EBca01_SQ005_M12 5', mRNA sequence
Length = 605
Score = 270 bits (584), Expect(2) = 1e-082
Identities = 107/167 (64%), Positives = 136/167 (81%)
Frame = -1 / +3
Query: 1127 PLPWGTRMSIALGAAKGLACLHNAQRPVIYRDFKTSNILLDSDYTAKLSDFGLAKDGPEG 948
PL W RM +AL AA+GLA LH+ + VIYRDFKTSN+LLDS+Y AKLSDFGLAKDGP G
Sbjct: 102 PLSWNLRMKVALEAARGLAFLHSDEAKVIYRDFKTSNVLLDSEYNAKLSDFGLAKDGPSG 281
Query: 947 DQTHVSTRVMGTYGYAAPEYVMTGHLTARSDVYSFGVVLLELLTGRKSIDKSRPSREQSL 768
D++HVSTRVMGT GYAAPEY+ TGHLT +SDVY++GVVLLELLTG++++DK+RP + +L
Sbjct: 282 DKSHVSTRVMGTQGYAAPEYLATGHLTTKSDVYTYGVVLLELLTGQRALDKNRPPGQHNL 461
Query: 767 VDWALPKLNDKRRLLQIIDPRLEGQYSARAAHKSCSLAFYCLSQNPK 627
V+WA P +N KRR++ ++DPRL QYS AA K+ +LA CLS + +
Sbjct: 462 VEWARPYINSKRRVIHVLDPRLGSQYSLPAAQKAAALAMQCLSMDAR 602
Score = 144 bits (310), Expect(2) = 9e-036
Identities = 79/141 (56%), Positives = 94/141 (66%)
Frame = +1 / -2
Query: 676 AALAEYCPSSLGSMIWRSLLLSLSFGSAQSTRLCSLLGRDLSIDLRPVRSSSRTTPKLYT 855
AA +EYC + GS W +LLL L G A STRLC GR LS PV +S RTTP + T
Sbjct: 553 AAGSEYCDPNRGSRTWMTLLLLLM*GLAHSTRLCCPGGRFLSRARCPVSNSRRTTP*V*T 374
Query: 856 SLRAVK*PVITYSGAA*P*VPITRVDTCV*SPSGPSFARPKSDSLAV*SESSRMFDVLKS 1035
SL VK PV YSGAA P*VP+T V+T + SP GPSFA+PKS+S A+ SES R +VLKS
Sbjct: 373 SLFVVKWPVARYSGAAYP*VPMTLVET*LLSPLGPSFAKPKSESFALYSESRRTLEVLKS 194
Query: 1036 L*MTGL*ALWRQASPLAAPSA 1098
+T +L R+ASPLAA A
Sbjct: 193 RYITLASSLCRKASPLAASRA 131
Score = 57.9 bits (120), Expect(2) = 1e-082
Identities = 22/28 (78%), Positives = 25/28 (89%)
Frame = -1 / +3
Query: 1220 GYCCEDDHRLLVYEFMFRGSLENHLFRK 1137
GYC ED+ RLLVYEFM RGSLE+HLFR+
Sbjct: 3 GYCLEDEQRLLVYEFMPRGSLEHHLFRR 86
Score = 26.7 bits (52), Expect(2) = 9e-036
Identities = 10/25 (40%), Positives = 18/25 (72%)
Frame = +3 / -1
Query: 1143 E*VVF*TSSKHELVDKQPMVIFAAI 1217
E +V + +HELV+K+P+++ AI
Sbjct: 80 EKMVLQATPRHELVNKKPLLVLQAI 6
>gb|BF618611.2|BF618611 HVSMEc0006K17f Hordeum vulgare seedling shoot EST library HVcDNA0003
(Etiolated and unstressed) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEc0006K17f, mRNA sequence
Length = 553
Score = 219 bits (472), Expect(2) = 6e-082
Identities = 86/123 (69%), Positives = 106/123 (86%)
Frame = -1 / +3
Query: 1127 PLPWGTRMSIALGAAKGLACLHNAQRPVIYRDFKTSNILLDSDYTAKLSDFGLAKDGPEG 948
PL W RM +AL AA+GLA LH+ + VIYRDFKTSN+LLDS+Y AKLSDFGLAKDGP G
Sbjct: 183 PLSWNLRMKVALEAARGLAFLHSDEAKVIYRDFKTSNVLLDSEYNAKLSDFGLAKDGPSG 362
Query: 947 DQTHVSTRVMGTYGYAAPEYVMTGHLTARSDVYSFGVVLLELLTGRKSIDKSRPSREQSL 768
D++HVSTRVMGT GYAAPEY+ TGHLT +SDVY++GVVLLELLTG++++DK+RP + +L
Sbjct: 363 DKSHVSTRVMGTQGYAAPEYLATGHLTTKSDVYTYGVVLLELLTGQRALDKNRPPGQHNL 542
Query: 767 VDW 759
V+W
Sbjct: 543 VEW 551
Score = 117 bits (251), Expect(2) = 2e-036
Identities = 65/112 (58%), Positives = 77/112 (68%)
Frame = +1 / -1
Query: 763 STRLCSLLGRDLSIDLRPVRSSSRTTPKLYTSLRAVK*PVITYSGAA*P*VPITRVDTCV 942
STRLC GR LS PV +S RTTP + TSL VK PV YSGAA P*VP+T V+T +
Sbjct: 547 STRLCCPGGRFLSRARCPVSNSRRTTP*V*TSLFVVKWPVARYSGAAYP*VPMTLVET*L 368
Query: 943 *SPSGPSFARPKSDSLAV*SESSRMFDVLKSL*MTGL*ALWRQASPLAAPSA 1098
SP GPSFA+PKS+S A+ SES R +VLKS +T +L R+ASPLAA A
Sbjct: 367 LSPLGPSFAKPKSESFALYSESRRTLEVLKSRYITLASSLCRKASPLAASRA 212
Score = 106 bits (227), Expect(2) = 6e-082
Identities = 41/53 (77%), Positives = 47/53 (88%)
Frame = -1 / +3
Query: 1295 QGHREWLTEVNCLGQLRHPNLVKLIGYCCEDDHRLLVYEFMFRGSLENHLFRK 1137
QGH+EWL EVN LG++ HPNLVKLIGYC ED+ RLLVYEFM RGSLE+HLFR+
Sbjct: 9 QGHKEWLAEVNYLGRVSHPNLVKLIGYCLEDEQRLLVYEFMPRGSLEHHLFRR 167
Score = 79.9 bits (168), Expect(2) = 1e-023
Identities = 42/118 (35%), Positives = 65/118 (55%)
Frame = +3 / -3
Query: 765 HQALLPAGPRLVDRLAPRQELQQDHAEAVHVTPSSQVTGHHIFRGSITVGSHHPCRHMRL 944
HQ +L LV P Q+L +++ V +T QV IFR SI++ H P R+M
Sbjct: 545 HQVMLSRRAVLV*STLPGQQL*KNNTIGVDITLRGQVACCEIFRRSISLSPHDPSRNMTF 366
Query: 945 ITFRAIFCEAKVRQFGSIIGVQQNV*CLEISVDDGPLSVVEASEPFSGSQRD*HPSTP 1118
I RAIFC+AK+R+F I V++++ LEI+V + L ++ S+ + + HP P
Sbjct: 365 IATRAIFCQAKIREFCIIFRVKKDIRGLEITVYNFSLITMQESKSPGSLKSNLHPQIP 192
Score = 55.6 bits (115), Expect(2) = 2e-036
Identities = 22/51 (43%), Positives = 36/51 (70%)
Frame = +3 / -3
Query: 1143 E*VVF*TSSKHELVDKQPMVIFAAISDQLHQIWMPQLPQAVNLGKPFSVPL 1295
E +V + +HELV+K+P+++ AI D+LH+I + PQ ++L +PF VPL
Sbjct: 161 EKMVLQATPRHELVNKKPLLVLQAIPDELHKIGV*YSPQVIDLSQPFLVPL 9
Score = 51.0 bits (105), Expect(2) = 1e-023
Identities = 20/45 (44%), Positives = 26/45 (57%)
Frame = +1 / -1
Query: 1147 KWFSRLPRNMNXXXXXXXXXXQQYPINFTKFGCLNCPRQLTSVSH 1281
+W S+LP MN +QYP++FT+ GC PR LTS SH
Sbjct: 157 RWCSKLPLGMNS*TRSRCSSSKQYPMSFTRLGCDTRPR*LTSASH 23
>gb|AY943294.1| Hordeum vulgare subsp. vulgare clone BAC 673I14, complete sequence
Length = 108608
Score = 170 bits (365), Expect(5) = 6e-080
Identities = 70/97 (72%), Positives = 80/97 (82%)
Frame = -1 / +3
Query: 1049 PVIYRDFKTSNILLDSDYTAKLSDFGLAKDGPEGDQTHVSTRVMGTYGYAAPEYVMTGHL 870
PVIYRD K SNILL Y KLSDFGLAK GP GD+THVSTRVMGTYGY APEY MTG L
Sbjct: 81678 PVIYRDLKCSNILLGEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAPEYAMTGQL 81857
Query: 869 TARSDVYSFGVVLLELLTGRKSIDKSRPSREQSLVDW 759
T +SDVYS+GVVLLE++TGR++ID +R + EQ+LV W
Sbjct: 81858 TLKSDVYSYGVVLLEIITGRRAIDNTRATGEQNLVAW 81968
Score = 114 bits (243), Expect(3) = 9e-031
Identities = 58/96 (60%), Positives = 65/96 (67%)
Frame = +1 / -2
Query: 763 STRLCSLLGRDLSIDLRPVRSSSRTTPKLYTSLRAVK*PVITYSGAA*P*VPITRVDTCV 942
+TR CS + R LSI LRPV S+RTTP L TS V *PVI YSGA P VPIT V+TCV
Sbjct: 81964 ATRFCSPVARVLSIALRPVMISNRTTP*L*TSDFRVS*PVIAYSGAQYPYVPITLVETCV 81785
Query: 943 *SPSGPSFARPKSDSLAV*SESSRMFDVLKSL*MTG 1050
SP+GPSFA PKSDS S+MF+ KS MTG
Sbjct: 81784 LSPTGPSFANPKSDSFGWYPSPSKMFEHFKSRYMTG 81677
Score = 90.4 bits (191), Expect(5) = 6e-080
Identities = 39/72 (54%), Positives = 51/72 (70%)
Frame = -1 / +3
Query: 1361 ENVRVGLKSLPVAVKVLNKDGHQGHREWLTEVNCLGQLRHPNLVKLIGYCCEDDHRLLVY 1182
+ + L S VA+K L+++G QG+RE+L EV L L HP+LV LIGYC + D RLLVY
Sbjct: 81258 DTANILLPSQVVAIKQLDRNGLQGNREFLVEVLMLSLLHHPHLVNLIGYCADGDQRLLVY 81437
Query: 1181 EFMFRGSLENHL 1146
E+M GSLE+HL
Sbjct: 81438 EYMPLGSLEDHL 81473
Score = 60.2 bits (125), Expect(5) = 6e-080
Identities = 24/59 (40%), Positives = 37/59 (62%)
Frame = -1 / +3
Query: 758 ALPKLNDKRRLLQIIDPRLEGQYSARAAHKSCSLAFYCLSQNPKARPLMSDVVETLAPL 582
A P D+R+ Q+ DP LEG+Y AR +++ ++A C+ + P RPL+ DVV L+ L
Sbjct: 82572 ARPLFKDRRKFPQMADPALEGRYPARGLYQALAVAAMCVQEQPTLRPLIGDVVTALSYL 82748
Score = 51.9 bits (107), Expect(5) = 6e-080
Identities = 20/33 (60%), Positives = 23/33 (69%)
Frame = -1 / +2
Query: 1460 FTLFELETITKSFRVDYVLGEGGFGTVYKGYID 1362
FT EL T FR D +LGEGGFG VYKGY++
Sbjct: 80828 FTFRELAAATNGFRADCLLGEGGFGRVYKGYLE 80926
Score = 43.7 bits (89), Expect(3) = 9e-031
Identities = 21/57 (36%), Positives = 35/57 (61%)
Frame = +3 / -1
Query: 1149 VVF*TSSKHELVDKQPMVIFAAISDQLHQIWMPQLPQAVNLGKPFSVPLMSIFVEHL 1319
VVF + +H LV+++P+V AI++++ +W+ Q Q +L K V L SI +E L
Sbjct: 81470 VVFQRT*RHILVNQKPLVAIGAIANKVD*VWVVQQAQHEDLNKELPVALQSISIELL 81300
Score = 39.6 bits (80), Expect(5) = 6e-080
Identities = 16/28 (57%), Positives = 18/28 (64%)
Frame = -1 / +3
Query: 1124 LPWGTRMSIALGAAKGLACLHNAQRPVI 1041
L W TRM IA GAAKGL LH+ P +
Sbjct: 81600 LDWNTRMKIAAGAAKGLEHLHDKTNPPV 81683
Score = 35.0 bits (70), Expect(3) = 9e-031
Identities = 16/26 (61%), Positives = 18/26 (69%)
Frame = +1 / -2
Query: 682 LAEYCPSSLGSMIWRSLLLSLSFGSA 759
LA Y PSS GS IW + LLSL+ G A
Sbjct: 82648 LAGYRPSSAGSAIWGNFLLSLNKGRA 82571
>gb|BI948692.1|BI948692 HVSMEl0010I13f Hordeum vulgare spike EST library HVcDNA0012 (Fusarium
infected) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEl0010I13f, mRNA sequence
Length = 847
Score = 234 bits (506), Expect(2) = 9e-080
Identities = 97/162 (59%), Positives = 124/162 (76%)
Frame = -1 / +1
Query: 1127 PLPWGTRMSIALGAAKGLACLHNAQRPVIYRDFKTSNILLDSDYTAKLSDFGLAKDGPEG 948
PL W RM +AL AA+GLA LH+ + VIYRDFKTSN+LLDS+Y AKLSDFGLAKDGP G
Sbjct: 145 PLSWNLRMRVALEAARGLAFLHSDEAKVIYRDFKTSNVLLDSEYNAKLSDFGLAKDGPSG 324
Query: 947 DQTHVSTRVMGTYGYAAPEYVMTGHLTARSDVYSFGVVLLELLTGRKSIDKSRPSREQSL 768
D++HVSTRVMGT GYAAPEY+ TGHLT +SDVY++GVVLLELLTG+ S++K+ P + +L
Sbjct: 325 DKSHVSTRVMGTQGYAAPEYLATGHLTTKSDVYTYGVVLLELLTGQTSLNKNLPPGQHNL 504
Query: 767 VDWALPKLNDKRRLLQIIDPRLEGQYSARAAHKSCSLAFYCL 642
V+WA P +N +RR+ +++PR + K SL +CL
Sbjct: 505 VEWARPYINMQRRVTSVLNPRGGHKI*LSRVQKRGSLTKHCL 630
Score = 127 bits (271), Expect(2) = 1e-036
Identities = 72/131 (54%), Positives = 86/131 (65%)
Frame = +1 / -3
Query: 706 LGSMIWRSLLLSLSFGSAQSTRLCSLLGRDLSIDLRPVRSSSRTTPKLYTSLRAVK*PVI 885
LG +LL L G A STRLC GR L D+ PV +S RTTP + TSL VK PV
Sbjct: 566 LGFRTLVTLLCMLM*GLAHSTRLCCPGGRFLFRDVCPVSNSRRTTP*V*TSLFVVKWPVA 387
Query: 886 TYSGAA*P*VPITRVDTCV*SPSGPSFARPKSDSLAV*SESSRMFDVLKSL*MTGL*ALW 1065
YSGAA P*VP+T V+T + SP GPSFA+PKS+S A+ SES R +VLKS +T +L
Sbjct: 386 RYSGAAYP*VPMTLVET*LLSPLGPSFAKPKSESFALYSESRRTLEVLKSRYITLASSLC 207
Query: 1066 RQASPLAAPSA 1098
R+ASPLAA A
Sbjct: 206 RKASPLAASRA 174
Score = 84.0 bits (177), Expect(2) = 9e-080
Identities = 34/43 (79%), Positives = 37/43 (86%)
Frame = -1 / +1
Query: 1265 NCLGQLRHPNLVKLIGYCCEDDHRLLVYEFMFRGSLENHLFRK 1137
N GQL HPNLVKLIGYC ED+ RLLVYEFM RGSLE+HLFR+
Sbjct: 1 NGRGQLSHPNLVKLIGYCLEDEQRLLVYEFMPRGSLEHHLFRR 129
Score = 82.2 bits (173), Expect(2) = 8e-021
Identities = 43/118 (36%), Positives = 66/118 (55%)
Frame = +3 / -2
Query: 765 HQALLPAGPRLVDRLAPRQELQQDHAEAVHVTPSSQVTGHHIFRGSITVGSHHPCRHMRL 944
HQ +L LV R P Q+L +++ V +T QV IFR SI++ H P R+M
Sbjct: 507 HQVMLSRRQVLV*RRLPGQQL*KNNTIGVDITLRGQVACCEIFRRSISLSPHDPSRNMTF 328
Query: 945 ITFRAIFCEAKVRQFGSIIGVQQNV*CLEISVDDGPLSVVEASEPFSGSQRD*HPSTP 1118
I RAIFC+AK+R+F I V++++ LEI+V + L ++ S+ + + HP P
Sbjct: 327 IATRAIFCQAKIREFCIIFRVKKDIRGLEITVYNFSLITMQESKSPGSLKSNPHPQIP 154
Score = 47.3 bits (97), Expect(2) = 1e-036
Identities = 16/38 (42%), Positives = 23/38 (60%)
Frame = +1 / -3
Query: 1147 KWFSRLPRNMNXXXXXXXXXXQQYPINFTKFGCLNCPR 1260
+W S+LP MN +QYP++FT+ GC +CPR
Sbjct: 119 RWCSKLPLGMNS*TRSRCSSSKQYPMSFTRLGCDSCPR 6
Score = 39.1 bits (79), Expect(2) = 8e-021
Identities = 16/41 (39%), Positives = 28/41 (68%)
Frame = +3 / -2
Query: 1143 E*VVF*TSSKHELVDKQPMVIFAAISDQLHQIWMPQLPQAV 1265
E +V + +HELV+K+P+++ AI D+LH+I + LP +
Sbjct: 123 EKMVLQATPRHELVNKKPLLVLQAIPDELHKIGV**LPPPI 1
>gb|BM816713.1|BM816713 HC114E03_SK.ab1 HC Hordeum vulgare subsp. vulgare cDNA clone
HC114E03_SK.ab1 similar to Protein-tyrosine
kinase,Protein kinase,, mRNA sequence
Length = 587
Score = 291 bits (629), Expect = 1e-077
Identities = 120/156 (76%), Positives = 130/156 (83%)
Frame = -1 / +1
Query: 1301 GHQGHREWLTEVNCLGQLRHPNLVKLIGYCCEDDHRLLVYEFMFRGSLENHLFRKTATPL 1122
G QGH+EWL EV LGQLRH NLVKLIGYC ED+HR+LVYEFM SLE HLF+ L
Sbjct: 118 GTQGHKEWLAEVFFLGQLRHKNLVKLIGYCYEDEHRMLVYEFMSGESLEKHLFKSINGSL 297
Query: 1121 PWGTRMSIALGAAKGLACLHNAQRPVIYRDFKTSNILLDSDYTAKLSDFGLAKDGPEGDQ 942
PW TRM IA GAAKGLA LH+A PVIYRDFK SNILLDSDY KLSDFGLAKDGP+GD
Sbjct: 298 PWMTRMKIAFGAAKGLAFLHDADPPVIYRDFKASNILLDSDYNTKLSDFGLAKDGPQGDA 477
Query: 941 THVSTRVMGTYGYAAPEYVMTGHLTARSDVYSFGVV 834
THV+T VMGT+GYAAPEY+MTGHLTA+SDVYSFGVV
Sbjct: 478 THVTTCVMGTHGYAAPEYIMTGHLTAKSDVYSFGVV 585
Score = 175 bits (377), Expect = 5e-043
Identities = 87/149 (58%), Positives = 100/149 (67%)
Frame = +1 / -1
Query: 835 TTPKLYTSLRAVK*PVITYSGAA*P*VPITRVDTCV*SPSGPSFARPKSDSLAV*SESSR 1014
TTPKLYTSL AVK PV+ YSGAA*P VP+T V TCV SP GPS A PKSD+L +*SESS+
Sbjct: 584 TTPKLYTSLLAVKWPVMMYSGAA*PCVPMTHVVTCVASPWGPSLASPKSDNLVL*SESSK 405
Query: 1015 MFDVLKSL*MTGL*ALWRQASPLAAPSAIDILVPQGNGVAVFRNKWFSRLPRNMNXXXXX 1194
M + LKS *+TG A R+A P AAP AI ILV G + + FSRL MN
Sbjct: 404 MLEALKSR*ITGGSAS*RKARPFAAPKAIFILVIHGREPFMLLKRCFSRLSPLMNS*TSI 225
Query: 1195 XXXXXQQYPINFTKFGCLNCPRQLTSVSH 1281
QYPINFT+F CL+CPR+ TS SH
Sbjct: 224 RCSSS*QYPINFTRFLCLSCPRKKTSASH 138
Score = 115 bits (245), Expect = 9e-025
Identities = 52/153 (33%), Positives = 88/153 (57%)
Frame = +3 / -3
Query: 837 HAEAVHVTPSSQVTGHHIFRGSITVGSHHPCRHMRLITFRAIFCEAKVRQFGSIIGVQQN 1016
+++A+++ QV H + R IT+ H C H+ +T AI + +VRQ G +I V+Q+
Sbjct: 582 YSKAIYIALGCQVARHDVLRCCITMCPHDTCCHVCRVTLGAILGQPEVRQLGVVIRVKQD 403
Query: 1017 V*CLEISVDDGPLSVVEASEPFSGSQRD*HPSTPGQWRSCLSE*VVF*TSSKHELVDKQP 1196
V LE++VD + +++ + ++ D HP P + E V+ + HELVD+ P
Sbjct: 402 VGGLEVAVDHRRVGIMKKGKALCRAESDLHPCHPRERAIYALEEVLLQALAAHELVDQHP 223
Query: 1197 MVIFAAISDQLHQIWMPQLPQAVNLGKPFSVPL 1295
+++ A+ DQLHQ+ +PQLP+ NL +P V L
Sbjct: 222 VLVLVAVPDQLHQVLVPQLPKKENLCQPLLVTL 124
>gb|CB877039.1|CB877039 HP03F15T HP Hordeum vulgare subsp. vulgare cDNA clone HP03F15
5-PRIME, mRNA sequence
Length = 548
Score = 228 bits (492), Expect(2) = 1e-077
Identities = 90/131 (68%), Positives = 111/131 (84%)
Frame = -1 / +3
Query: 1127 PLPWGTRMSIALGAAKGLACLHNAQRPVIYRDFKTSNILLDSDYTAKLSDFGLAKDGPEG 948
PL W RM +AL AA+GLA LH+ + VIYRDFKTSN+LLDS+Y AKLSDFGLAKDGP G
Sbjct: 156 PLSWNLRMKVALEAARGLAFLHSDEAKVIYRDFKTSNVLLDSEYNAKLSDFGLAKDGPSG 335
Query: 947 DQTHVSTRVMGTYGYAAPEYVMTGHLTARSDVYSFGVVLLELLTGRKSIDKSRPSREQSL 768
D++HVSTRVMGT GYAAPEY+ TGHLT +SDVY++GVVLLELLTG++++DK+RP + +L
Sbjct: 336 DKSHVSTRVMGTQGYAAPEYLATGHLTTKSDVYTYGVVLLELLTGQRALDKNRPPGQHNL 515
Query: 767 VDWALPKLNDK 735
V+WA P +N K
Sbjct: 516 VEWARPYINSK 548
Score = 122 bits (260), Expect(2) = 5e-034
Identities = 69/121 (57%), Positives = 81/121 (66%)
Frame = +1 / -2
Query: 736 LSLSFGSAQSTRLCSLLGRDLSIDLRPVRSSSRTTPKLYTSLRAVK*PVITYSGAA*P*V 915
L L G A STRLC GR LS PV +S RTTP + TSL VK PV YSGAA P*V
Sbjct: 547 LLLM*GLAHSTRLCCPGGRFLSRARCPVSNSRRTTP*V*TSLFVVKWPVARYSGAAYP*V 368
Query: 916 PITRVDTCV*SPSGPSFARPKSDSLAV*SESSRMFDVLKSL*MTGL*ALWRQASPLAAPS 1095
P+T V+T + SP GPSFA+PKS+S A+ SES R +VLKS +T +L R+ASPLAA
Sbjct: 367 PMTLVET*LLSPLGPSFAKPKSESFALYSESRRTLEVLKSRYITLASSLCRKASPLAASR 188
Query: 1096 A 1098
A
Sbjct: 187 A 185
Score = 83.1 bits (175), Expect(2) = 1e-077
Identities = 34/43 (79%), Positives = 37/43 (86%)
Frame = -1 / +3
Query: 1265 NCLGQLRHPNLVKLIGYCCEDDHRLLVYEFMFRGSLENHLFRK 1137
N L QL HPNLVKLIGYC ED+ RLLVYEFM RGSLE+HLFR+
Sbjct: 12 NYLVQLSHPNLVKLIGYCLEDEQRLLVYEFMPRGSLEHHLFRR 140
Score = 43.7 bits (89), Expect(2) = 5e-034
Identities = 15/38 (39%), Positives = 22/38 (57%)
Frame = +1 / -2
Query: 1147 KWFSRLPRNMNXXXXXXXXXXQQYPINFTKFGCLNCPR 1260
+W S+LP MN +QYP++FT+ GC +C R
Sbjct: 130 RWCSKLPLGMNS*TRSRCSSSKQYPMSFTRLGCDSCTR 17
>gb|AV917399.1|AV917399 AV917399 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags18m02 5', mRNA sequence
Length = 537
Score = 236 bits (510), Expect(2) = 4e-077
Identities = 92/138 (66%), Positives = 117/138 (84%)
Frame = -1 / +2
Query: 1127 PLPWGTRMSIALGAAKGLACLHNAQRPVIYRDFKTSNILLDSDYTAKLSDFGLAKDGPEG 948
PL W RM +AL AA+GLA LH+ + VIYRDFKTSN+LLDS+Y AKLSDFGLAKDGP G
Sbjct: 122 PLSWNLRMKVALEAARGLAFLHSDEAKVIYRDFKTSNVLLDSEYNAKLSDFGLAKDGPSG 301
Query: 947 DQTHVSTRVMGTYGYAAPEYVMTGHLTARSDVYSFGVVLLELLTGRKSIDKSRPSREQSL 768
D++HVSTRVMGT GYAAPEY+ TGHLT +SDVY++GVVLLELLTG++++DK+RP + +L
Sbjct: 302 DKSHVSTRVMGTQGYAAPEYLATGHLTTKSDVYTYGVVLLELLTGQRALDKNRPPGQHNL 481
Query: 767 VDWALPKLNDKRRLLQII 714
V+WA P +N KRR++ ++
Sbjct: 482 VEWARPYINSKRRVIHVL 535
Score = 131 bits (281), Expect(2) = 4e-035
Identities = 73/129 (56%), Positives = 86/129 (66%)
Frame = +1 / -1
Query: 712 SMIWRSLLLSLSFGSAQSTRLCSLLGRDLSIDLRPVRSSSRTTPKLYTSLRAVK*PVITY 891
S W +LLL L G A STRLC GR LS PV +S RTTP + TSL VK PV Y
Sbjct: 537 SRTWMTLLLLLM*GLAHSTRLCCPGGRFLSRARCPVSNSRRTTP*V*TSLFVVKWPVARY 358
Query: 892 SGAA*P*VPITRVDTCV*SPSGPSFARPKSDSLAV*SESSRMFDVLKSL*MTGL*ALWRQ 1071
SGAA P*VP+T V+T + SP GPSFA+PKS+S A+ SES R +VLKS +T +L R+
Sbjct: 357 SGAAYP*VPMTLVET*LLSPLGPSFAKPKSESFALYSESRRTLEVLKSRYITLASSLCRK 178
Query: 1072 ASPLAAPSA 1098
ASPLAA A
Sbjct: 177 ASPLAASRA 151
Score = 73.5 bits (154), Expect(2) = 4e-077
Identities = 29/35 (82%), Positives = 32/35 (91%)
Frame = -1 / +2
Query: 1241 PNLVKLIGYCCEDDHRLLVYEFMFRGSLENHLFRK 1137
PNLVKLIGYC ED+ RLLVYEFM RGSLE+HLFR+
Sbjct: 2 PNLVKLIGYCLEDEQRLLVYEFMPRGSLEHHLFRR 106
Score = 37.7 bits (76), Expect(2) = 4e-035
Identities = 14/32 (43%), Positives = 24/32 (75%)
Frame = +3 / -3
Query: 1143 E*VVF*TSSKHELVDKQPMVIFAAISDQLHQI 1238
E +V + +HELV+K+P+++ AI D+LH+I
Sbjct: 100 EKMVLQATPRHELVNKKPLLVLQAIPDELHKI 5
>gb|BQ756172.1|BQ756172 EBem05_SQ002_G10_R embryo, 14 DPA, no treatment, cv Optic, EBem05
Hordeum vulgare subsp. vulgare cDNA clone
EBem05_SQ002_G10 5', mRNA sequence
Length = 520
Score = 273 bits (591), Expect(2) = 3e-076
Identities = 112/155 (72%), Positives = 124/155 (80%)
Frame = -1 / +1
Query: 1337 SLPVAVKVLNKDGHQGHREWLTEVNCLGQLRHPNLVKLIGYCCEDDHRLLVYEFMFRGSL 1158
S VAVK LN G QG +EWL +VN LGQL HPNL +LIGYCCE H+LLVYE+M GSL
Sbjct: 55 STQVAVKELNP*GFQGDKEWLAQVNYLGQLSHPNLFELIGYCCEGSHKLLVYEYMACGSL 234
Query: 1157 ENHLFRKTATPLPWGTRMSIALGAAKGLACLHNAQRPVIYRDFKTSNILLDSDYTAKLSD 978
E HLFR+ +PW T M IALGAA+GL LH A+R +IYRDFKTSNILL +DY AKLSD
Sbjct: 235 EKHLFRRVCLNMPWSTLMKIALGAARGLEYLHGAERSIIYRDFKTSNILLYADYNAKLSD 414
Query: 977 FGLAKDGPEGDQTHVSTRVMGTYGYAAPEYVMTGH 873
FGLA+ GP GDQTHVSTRVMGTYGYAAPEYVMTGH
Sbjct: 415 FGLARTGPTGDQTHVSTRVMGTYGYAAPEYVMTGH 519
Score = 155 bits (332), Expect = 9e-037
Identities = 79/135 (58%), Positives = 92/135 (68%)
Frame = +1 / -3
Query: 877 PVITYSGAA*P*VPITRVDTCV*SPSGPSFARPKSDSLAV*SESSRMFDVLKSL*MTGL* 1056
PVITYSGAA*P*VP+TRV+T V SP GP ARPKS+SLA+*S S+MFDVLKSL*M L
Sbjct: 515 PVITYSGAA*P*VPMTRVETWVWSPVGPVLARPKSESLAL*SAYSKMFDVLKSL*MMDLS 336
Query: 1057 ALWRQASPLAAPSAIDILVPQGNGVAVFRNKWFSRLPRNMNXXXXXXXXXXQQYPINFTK 1236
A WR +SPLAAPSAI + V G R + FSRLP+ M QQ PI+ +
Sbjct: 335 APWRYSSPLAAPSAIFMRVDHGILRQTRRKRCFSRLPQAMYS*TSNLCEPSQQ*PISSNR 156
Query: 1237 FGCLNCPRQLTSVSH 1281
FG L+CPR LT +H
Sbjct: 155 FG*LSCPR*LTCANH 111
Score = 118 bits (252), Expect = 1e-025
Identities = 61/146 (41%), Positives = 90/146 (61%)
Frame = +3 / -2
Query: 873 VTGHHIFRGSITVGSHHPCRHMRLITFRAIFCEAKVRQFGSIIGVQQNV*CLEISVDDGP 1052
+ HHIFR I +GSH M L++ R+ C AKV + II V Q+V*CLEI +DDG
Sbjct: 519 MASHHIFRSCIAIGSHDSS*DMGLVSSRSGSC*AKV*KLSIIICV*QDV*CLEIPIDDGS 340
Query: 1053 LSVVEASEPFSGSQRD*HPSTPGQWRSCLSE*VVF*TSSKHELVDKQPMVIFAAISDQLH 1232
LS VE +P ++R+ H S P ++ S+ V+ T++ H L+DK M AAI++Q
Sbjct: 339 LSSVEILKPPCCTERNLHES*PWHIKANPSKKVLLKTATSHVLIDK*LM*TLAAIANQFK 160
Query: 1233 QIWMPQLPQAVNLGKPFSVPLMSIFV 1310
IWM +LP+ ++L +PF V L +++V
Sbjct: 159 *IWMTKLPKIIDLCQPFLVSLKALWV 82
Score = 33.1 bits (66), Expect(2) = 3e-076
Identities = 12/15 (80%), Positives = 13/15 (86%)
Frame = -1 / +2
Query: 1391 FGTVYKGYIDENVRV 1347
FG VYKG IDENVR+
Sbjct: 2 FGVVYKGVIDENVRI 46
>gb|BF620215.2|BF620215 HVSMEc0019A20f Hordeum vulgare seedling shoot EST library HVcDNA0003
(Etiolated and unstressed) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEc0019A20f, mRNA sequence
Length = 678
Score = 282 bits (611), Expect = 3e-075
Identities = 114/184 (61%), Positives = 144/184 (78%)
Frame = -1 / +3
Query: 1127 PLPWGTRMSIALGAAKGLACLHNAQRPVIYRDFKTSNILLDSDYTAKLSDFGLAKDGPEG 948
PL W RM +AL AA+GLA LH+ + VIYRDFKTSN+LLDS+Y AKLSDFGLAKDGP G
Sbjct: 33 PLSWNLRMKVALEAARGLAFLHSDEAKVIYRDFKTSNVLLDSEYNAKLSDFGLAKDGPSG 212
Query: 947 DQTHVSTRVMGTYGYAAPEYVMTGHLTARSDVYSFGVVLLELLTGRKSIDKSRPSREQSL 768
D++HVSTRVMGT GYAAPEY+ TGHLT +SDVY++GVVLLELLTG++++DK+RP + +L
Sbjct: 213 DKSHVSTRVMGTQGYAAPEYLATGHLTTKSDVYTYGVVLLELLTGQRALDKNRPPGQHNL 392
Query: 767 VDWALPKLNDKRRLLQIIDPRLEGQYSARAAHKSCSLAFYCLSQNPKARPLMSDVVETLA 588
V+WA P +N KRR++ ++DPRL QYS AA K+ +LA CLS + + RP M VV L
Sbjct: 393 VEWARPYINSKRRVIHVLDPRLGSQYSLPAAQKAAALAMQCLSMDARCRPDMDQVVTVLQ 572
Query: 587 PLQQ 576
L +
Sbjct: 573 KLPE 584
Score = 144 bits (310), Expect = 1e-033
Identities = 79/141 (56%), Positives = 94/141 (66%)
Frame = +1 / -3
Query: 676 AALAEYCPSSLGSMIWRSLLLSLSFGSAQSTRLCSLLGRDLSIDLRPVRSSSRTTPKLYT 855
AA +EYC + GS W +LLL L G A STRLC GR LS PV +S RTTP + T
Sbjct: 484 AAGSEYCDPNRGSRTWMTLLLLLM*GLAHSTRLCCPGGRFLSRARCPVSNSRRTTP*V*T 305
Query: 856 SLRAVK*PVITYSGAA*P*VPITRVDTCV*SPSGPSFARPKSDSLAV*SESSRMFDVLKS 1035
SL VK PV YSGAA P*VP+T V+T + SP GPSFA+PKS+S A+ SES R +VLKS
Sbjct: 304 SLFVVKWPVARYSGAAYP*VPMTLVET*LLSPLGPSFAKPKSESFALYSESRRTLEVLKS 125
Query: 1036 L*MTGL*ALWRQASPLAAPSA 1098
+T +L R+ASPLAA A
Sbjct: 124 RYITLASSLCRKASPLAASRA 62
>gb|BU979825.1|BU979825 HA17H19r HA Hordeum vulgare subsp. vulgare cDNA clone HA17H19
5-PRIME, mRNA sequence
Length = 435
Score = 278 bits (601), Expect = 7e-074
Identities = 119/140 (85%), Positives = 123/140 (87%)
Frame = -1 / +3
Query: 1637 NAVVAAHAXXQXLHXLXXPSKNANADRKHTCMSSDISDPSTPRKVEDAKNISIYNDVIAF 1458
NAVVAAHA Q LH L +KNA ADRKH SDISDPSTP K+ED K+ISIYN+VIAF
Sbjct: 15 NAVVAAHAQVQQLHLLQHSAKNALADRKHNRTFSDISDPSTPGKIEDTKDISIYNNVIAF 194
Query: 1457 TLFELETITKSFRVDYVLGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKDGHQGHREW 1278
TLFELETITKSFR DYVLGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKDGHQGHREW
Sbjct: 195 TLFELETITKSFRADYVLGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKDGHQGHREW 374
Query: 1277 LTEVNCLGQLRHPNLVKLIG 1218
LTEVN L QLRHPNLVKLIG
Sbjct: 375 LTEVNFLXQLRHPNLVKLIG 434
Score = 221 bits (477), Expect = 9e-057
Identities = 96/141 (68%), Positives = 110/141 (78%)
Frame = +3 / -2
Query: 1218 SDQLHQIWMPQLPQAVNLGKPFSVPLMSIFVEHLDCNRQ*LQPNPDIFIYVTLVNGPKSS 1397
S+QL+ IWMP LPQ +NL KPFSV LMSIFVEHLD NRQ + NPDI +Y+TLVN P++S
Sbjct: 434 SNQLY*IWMP*LPQEINLSKPFSVSLMSIFVEHLDSNRQRFEANPDILVYITLVNSPEAS 255
Query: 1398 FAKNIINTEALCDCL*LKQCEGNHIVVYGNVLGIFNFPRCGRVTYI**HAGVLPICIGVL 1577
F KNII T+ALCD LKQCEGNHIVVYGNVLGIFNF R R+TYI* VLPIC +L
Sbjct: 254 FTKNIIGTKALCDRFKLKQCEGNHIVVYGNVLGIFNFARR*RITYI*KGPVVLPICKSIL 75
Query: 1578 GRLX*XVEXLXXRVRSNDGIL 1640
GR+ V+ L RVRS+DGIL
Sbjct: 74 GRMLQQVQLLNLRVRSDDGIL 12
Score = 189 bits (407), Expect = 4e-047
Identities = 95/141 (67%), Positives = 102/141 (72%)
Frame = -2 / +1
Query: 1639 RMPSLLRTRXXXXSTXYXSLPRTPMQIGSTPACHQI*VTLPHLGKLKMPRTFPYTTM*LP 1460
RMPS LRTR T LPR +QIGST QI*V L L KLK+PRTFPYTTM*LP
Sbjct: 13 RMPSSLRTRKFSSCTCCNILPRMLLQIGSTTGPFQI*VILQRLAKLKIPRTFPYTTM*LP 192
Query: 1459 SHCLS*RQSQRASVLIMFLAKEDLGPFTRVT*MKMSGLG*SHCLLQSRCSTKMDIKGTEN 1280
SHCLS ++SQRA V IMFL KE G FTRV * +MSGL + CLL SRCSTKMDIK TEN
Sbjct: 193 SHCLSLKRSQRAFVPIMFLVKEASGLFTRVI*TRMSGLASNRCLLLSRCSTKMDIKDTEN 372
Query: 1279 GLPRLTAWGS*GIQIW*S*SD 1217
GL RL + GS*GIQI *S* D
Sbjct: 373 GLLRLISXGS*GIQI**S*LD 435
Score = 186 bits (400), Expect = 4e-046
Identities = 85/141 (60%), Positives = 95/141 (67%)
Frame = +2 / -1
Query: 1217 IRSTSPNLDASTAPGS*PR*AILCALDVHLC*AP*LQQAVTSAQP*HFHLCNPCKRSQIL 1396
I+ST +LDA A G+*P+*AILC LDVHLC*AP* QQA QP H L NPCK+S+ L
Sbjct: 435 IQSTLLDLDALAAXGN*PQ*AILCVLDVHLC*AP*QQQAAI*GQPGHSRLYNPCKQSRSL 256
Query: 1397 LRQEHNQHGSSL*LSLAQTM*RQSHRCIWKCSWHLQLS*VWKGHLYLMTCRCASYLHWRS 1576
L QEHN+H SSL* AQTM*RQSH CIWKC W+LQ K HLYL CASYL S
Sbjct: 255 LHQEHNRHESSL*SFQAQTM*RQSHCCIWKCPWYLQFCQALKDHLYLKRSGCASYLQEHS 76
Query: 1577 WKAXVTXGXXXXARAQQRRHS 1639
W+ ARAQ+RRHS
Sbjct: 75 WQNVAASAAAELARAQRRRHS 13
Score = 181 bits (389), Expect = 1e-044
Identities = 76/119 (63%), Positives = 90/119 (75%)
Frame = -3 / +2
Query: 1578 QERQCR*EAHLHVIRYK*PFHT*ES*RCQEHFHIQRCDCLHIV*ARDNHKELPC*LCSWR 1399
QE CR*EA + RYK* F+ ++*R Q HFHIQ+CDCLHIV*A ++HKEL C LCSW
Sbjct: 74 QECSCR*EAQPDLFRYK*SFNAWQN*RYQGHFHIQQCDCLHIV*A*NDHKELSCRLCSW* 253
Query: 1398 RRIWDRLQGLHR*KCQGWAEVTACCSQGAQQRWTSRAQRMAYRG*LPGAVEASKFGEVD 1222
RR+ D LQGL+R +C GW ++ ACC QGAQQRWTSR QRMAY G* P A +ASK +VD
Sbjct: 254 RRLRDCLQGLYRRECPGWPQIAACCCQGAQQRWTSRTQRMAY*G*FPXAAKASKSSKVD 430
Score = 86.8 bits (183), Expect(3) = 1e-027
Identities = 40/52 (76%), Positives = 44/52 (84%)
Frame = +1 / -3
Query: 1423 KLFVIVSSSNNVKAITSLYMEMFLASSTFLGVEGSLISDDMQVCFLSALAFL 1578
KLFVIVSSSNNVKAIT LYMEM L SS GVEGSLIS+ +++CFLSA AFL
Sbjct: 229 KLFVIVSSSNNVKAITLLYMEMSLVSSILPGVEGSLISEKVRLCFLSARAFL 74
Score = 47.8 bits (98), Expect(3) = 1e-027
Identities = 17/21 (80%), Positives = 20/21 (95%)
Frame = +1 / -3
Query: 1219 PINFTKFGCLNCPRQLTSVSH 1281
PINFT+FGCL+C R+LTSVSH
Sbjct: 433 PINFTRFGCLSCXRKLTSVSH 371
Score = 27.6 bits (54), Expect(3) = 1e-027
Identities = 11/15 (73%), Positives = 12/15 (80%)
Frame = +1 / -3
Query: 1324 ATGSDFSPTLTFSSM 1368
ATGSD PT TFSS+
Sbjct: 328 ATGSDLRPTRTFSSI 284
>gb|BI948363.1|BI948363 HVSMEl0009E03f Hordeum vulgare spike EST library HVcDNA0012 (Fusarium
infected) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEl0009E03f, mRNA sequence
Length = 936
Score = 147 bits (315), Expect(4) = 4e-073
Identities = 66/111 (59%), Positives = 77/111 (69%)
Frame = -1 / +1
Query: 1058 AQRPVIYRDFKTSNILLDSDYTAKLSDFGLAKDGPEGDQTHVSTRVMGTYGYAAPEYVMT 879
A VIYRDFK+SNILL + KLSD GLAK GP GD+THVSTRVMGTYGY APEY MT
Sbjct: 592 ASPXVIYRDFKSSNILLGERFHPKLSDCGLAKLGPVGDKTHVSTRVMGTYGYCAPEYCMT 771
Query: 878 GHLTARSDVYSFGVVLLELLTGRKSIDKSRPSREQSLVDWALPKLNDKRRL 726
G LT +SDVYSF V+ LEL+T R ID +P Q+ A+ D+R +
Sbjct: 772 GQLTVKSDVYSFRVLFLELITRRIGIDTPKPEGSQTWWHVAVHLFRDRRNI 924
Score = 89.0 bits (188), Expect(4) = 4e-073
Identities = 39/61 (63%), Positives = 46/61 (75%)
Frame = -1 / +1
Query: 1328 VAVKVLNKDGHQGHREWLTEVNCLGQLRHPNLVKLIGYCCEDDHRLLVYEFMFRGSLENH 1149
VAVK L+++G QG+RE+L EV L L H NLV LIGYC + D RLLVYEFM GSLE+H
Sbjct: 313 VAVKQLDRNGLQGNREFLVEVLMLSLLHHTNLVNLIGYCADGDQRLLVYEFMPLGSLEDH 492
Query: 1148 L 1146
L
Sbjct: 493 L 495
Score = 89.0 bits (188), Expect(2) = 5e-022
Identities = 49/87 (56%), Positives = 57/87 (65%)
Frame = +1 / -2
Query: 787 GRDLSIDLRPVRSSSRTTPKLYTSLRAVK*PVITYSGAA*P*VPITRVDTCV*SPSGPSF 966
G +SI +R V SS + T KL TS V PV+ YSGA P VPITRV+T V SP+GPSF
Sbjct: 863 GLGVSIPIRLVISSRKRTRKL*TSDFTVSCPVMQYSGAQYPYVPITRVET*VLSPTGPSF 684
Query: 967 ARPKSDSLAV*SESSRMFDVLKSL*MT 1047
ARP+SDS RMFD LKS *+T
Sbjct: 683 ARPQSDSFG*NRSPRRMFDDLKSR*IT 603
Score = 54.7 bits (113), Expect(4) = 4e-073
Identities = 23/43 (53%), Positives = 28/43 (65%)
Frame = -1 / +1
Query: 1460 FTLFELETITKSFRVDYVLGEGGFGTVYKGYIDENVRVGLKSL 1332
FT EL TK+FR D +LGEGGFG VYKG ++ V +K L
Sbjct: 202 FTFRELAAATKNFRQDCMLGEGGFGRVYKGRLENGQAVAVKQL 330
Score = 42.8 bits (87), Expect(4) = 4e-073
Identities = 17/29 (58%), Positives = 19/29 (65%)
Frame = -1 / +1
Query: 1127 PLPWGTRMSIALGAAKGLACLHNAQRPVI 1041
PL W TRM IA GAAKGL LH+ P +
Sbjct: 520 PLDWNTRMKIAAGAAKGLEHLHDKASPXV 606
Score = 36.3 bits (73), Expect(2) = 5e-022
Identities = 16/60 (26%), Positives = 37/60 (61%)
Frame = +3 / -1
Query: 1149 VVF*TSSKHELVDKQPMVIFAAISDQLHQIWMPQLPQAVNLGKPFSVPLMSIFVEHLDCN 1328
V+F* + H+L++K+ +V + I++ + ++ + Q + +L K FS+ L ++ ++ L N
Sbjct: 492 VIF**AQWHKLINKEALVTISTITN*IDKVSVMQETEHEDLNKEFSISLETVTIKLLHSN 313
>gb|BJ471569.1|BJ471569 BJ471569 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal19g05 5', mRNA sequence
Length = 623
Score = 273 bits (590), Expect = 2e-072
Identities = 118/190 (62%), Positives = 133/190 (70%)
Frame = -1 / +2
Query: 1559 RKHTCMSSDISDPSTPRKVEDAKNISIYNDVIAFTLFELETITKSFRVDYVLGEGGFGTV 1380
RK S IS P K + Y +V FT EL TK+FR D +LGEGGFG V
Sbjct: 53 RKCKSDSKAISSVLAPPKDVEDLQTEGYGNVNIFTYNELRAATKNFRPDQILGEGGFGVV 232
Query: 1379 YKGYIDENVRVGLKSLPVAVKVLNKDGHQGHREWLTEVNCLGQLRHPNLVKLIGYCCEDD 1200
YKG IDENVR+G KS VAVK LN +G QG +EWL EVN LGQL HPNLV+LIGYCCE
Sbjct: 233 YKGVIDENVRIGFKSTQVAVKELNPEGFQGDKEWLAEVNYLGQLSHPNLVELIGYCCEGS 412
Query: 1199 HRLLVYEFMFRGSLENHLFRKTATPLPWGTRMSIALGAAKGLACLHNAQRPVIYRDFKTS 1020
HRLLVYE+M GSLE HLFR+ +PW TRM IALGAA+GL LH A+R +IYRDFKTS
Sbjct: 413 HRLLVYEYMACGSLEKHLFRRVCLNMPWSTRMKIALGAARGLEYLHGAERSIIYRDFKTS 592
Query: 1019 NILLDSDYTA 990
NILLD+DY A
Sbjct: 593 NILLDADYNA 622
Score = 118 bits (252), Expect = 1e-025
Identities = 62/161 (38%), Positives = 94/161 (58%)
Frame = +3 / -2
Query: 996 IIGVQQNV*CLEISVDDGPLSVVEASEPFSGSQRD*HPSTPGQWRSCLSE*VVF*TSSKH 1175
II V Q+V*CLEI +DDG LS VE +P ++R+ H S P ++ S+ V+ T++ H
Sbjct: 616 IIRV*QDV*CLEIPIDDGSLSSVEILKPPCCTERNLHAS*PWHIKANPSKKVLLKTATSH 437
Query: 1176 ELVDKQPMVIFAAISDQLHQIWMPQLPQAVNLGKPFSVPLMSIFVEHLDCNRQ*LQPNPD 1355
L+DK PM AAI++Q + IWM +LP+ ++ +PF V L +++V N + +
Sbjct: 436 VLIDK*PM*TLAAIANQFN*IWMTKLPKIIDFCQPFLVSLKALWV*FFHSNLCGFKTYSN 257
Query: 1356 IFIYVTLVNGPKSSFAKNIINTEALCDCL*LKQCEGNHIVV 1478
IFI T VN K + +KN+I + LC C CE +I +
Sbjct: 256 IFINDTFVNNSKPTLSKNLIRPKVLCGCSQFVVCEDINISI 134
Score = 112 bits (239), Expect(2) = 6e-027
Identities = 62/126 (49%), Positives = 72/126 (57%)
Frame = +1 / -3
Query: 991 AV*SESSRMFDVLKSL*MTGL*ALWRQASPLAAPSAIDILVPQGNGVAVFRNKWFSRLPR 1170
A+*S SS+MFDVLKSL*M L A WR +SPLAAPSAI + V G R + FSRLP+
Sbjct: 621 AL*SASSKMFDVLKSL*MMDLSAPWRYSSPLAAPSAIFMRVDHGILRQTRRKRCFSRLPQ 442
Query: 1171 NMNXXXXXXXXXXQQYPINFTKFGCLNCPRQLTSVSHXXXXXXXXXXXXXXATGSDFSPT 1350
M QQ PI+ T+FG L+CPR LTS +H AT D P
Sbjct: 441 AMYS*TSNLCEPSQQ*PISSTRFG*LSCPR*LTSANHSLSP*KPSGFSSFTATCVDLKPI 262
Query: 1351 LTFSSM 1368
LTFSSM
Sbjct: 261 LTFSSM 244
Score = 29.5 bits (58), Expect(2) = 6e-027
Identities = 18/40 (45%), Positives = 22/40 (55%)
Frame = +2 / -1
Query: 1352 *HFHLCNPCKRSQILLRQEHNQHGSSL*LSLAQTM*RQSH 1471
*HFH + CK+ Q QE +Q SSL L + M*R H
Sbjct: 260 *HFHQ*HLCKQLQTHPLQEFDQAESSLWLLAVRCM*RY*H 141
>gb|CK123771.1|CK123771 BES1824105f02 BES1824 Hordeum vulgare subsp. vulgare cDNA clone
MPMGp2010F025 5-PRIME, mRNA sequence
Length = 808
Score = 220 bits (474), Expect(3) = 3e-071
Identities = 92/156 (58%), Positives = 117/156 (75%)
Frame = -1 / +1
Query: 1049 PVIYRDFKTSNILLDSDYTAKLSDFGLAKDGPEGDQTHVSTRVMGTYGYAAPEYVMTGHL 870
PVI+RDFK+SNILLD D+ A++SDFGLAK G + HVSTRV+GT GY APEY +TGHL
Sbjct: 223 PVIHRDFKSSNILLDKDFHARVSDFGLAKLGSDRAGGHVSTRVLGTQGYVAPEYALTGHL 402
Query: 869 TARSDVYSFGVVLLELLTGRKSIDKSRPSREQSLVDWALPKLNDKRRLLQIIDPRLEGQY 690
T +SDVYS+GVVLLELLTGR +D R E LV+WALP L D+ +++QI+DP LEGQY
Sbjct: 403 TTKSDVYSYGVVLLELLTGRVPVDMKRSPGEGVLVNWALPMLTDREKVVQILDPSLEGQY 582
Query: 689 SARAAHKSCSLAFYCLSQNPKARPLMSDVVETLAPL 582
S + A + ++A C+ RPLM+DVV++L PL
Sbjct: 583 SLKDAVQVAAIAAMCVXPEADYRPLMADVVQSLVPL 690
Score = 105 bits (223), Expect(2) = 3e-024
Identities = 63/125 (50%), Positives = 76/125 (60%)
Frame = +1 / -3
Query: 676 AALAEYCPSSLGSMIWRSLLLSLSFGSAQSTRLCSLLGRDLSIDLRPVRSSSRTTPKLYT 855
A+ EY PSS GS I + S+S G+AQ T+ S +S PV +S TTP LYT
Sbjct: 596 ASFNEY*PSSDGSRICTTFSRSVSIGNAQLTKTPSPGDLFISTGTLPVSNSRSTTP*LYT 417
Query: 856 SLRAVK*PVITYSGAA*P*VPITRVDTCV*SPSGPSFARPKSDSLAV*SESSRMFDVLKS 1035
S VK PV YSGA *P VP TRVDT + S PS A+PKS++LA S S RM +LKS
Sbjct: 416 SDLVVKCPVNAYSGAT*PCVPKTRVDT*PPALSDPSLAKPKSETLAWKSLSKRMLLLLKS 237
Query: 1036 L*MTG 1050
L +TG
Sbjct: 236 LCITG 222
Score = 52.4 bits (108), Expect(3) = 3e-071
Identities = 21/37 (56%), Positives = 26/37 (70%)
Frame = -1 / +1
Query: 1253 QLRHPNLVKLIGYCCEDDHRLLVYEFMFRGSLENHLF 1143
+LR L+ LIG+C E HRLLVYEFM G L+ HL+
Sbjct: 1 RLRSSYLLGLIGHCSEGGHRLLVYEFMANGCLQEHLY 111
Score = 36.8 bits (74), Expect(3) = 3e-071
Identities = 16/28 (57%), Positives = 17/28 (60%)
Frame = -1 / +1
Query: 1124 LPWGTRMSIALGAAKGLACLHNAQRPVI 1041
L W TRM IAL AAKGL LH P +
Sbjct: 145 LDWSTRMRIALEAAKGLEYLHERVTPPV 228
Score = 27.6 bits (54), Expect(2) = 3e-024
Identities = 12/21 (57%), Positives = 13/21 (61%)
Frame = +1 / -3
Query: 1063 WRQASPLAAPSAIDILVPQGN 1125
WR + P AA AI ILV Q N
Sbjct: 206 WRYSRPFAASRAILILVDQSN 144
>gb|BF629141.2|BF629141 HVSMEb0010B01f Hordeum vulgare seedling shoot EST library HVcDNA0002
(Dehydration stress) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEb0010B01f, mRNA sequence
Length = 522
Score = 267 bits (577), Expect = 1e-070
Identities = 109/172 (63%), Positives = 137/172 (79%)
Frame = -1 / +3
Query: 1097 ALGAAKGLACLHNAQRPVIYRDFKTSNILLDSDYTAKLSDFGLAKDGPEGDQTHVSTRVM 918
AL AA+GLA LH+ + VIYRDFKTSN+LLDS+Y AKLSDFGLAKDGP GD++HVSTRVM
Sbjct: 3 ALEAARGLAFLHSDEAKVIYRDFKTSNVLLDSEYNAKLSDFGLAKDGPSGDKSHVSTRVM 182
Query: 917 GTYGYAAPEYVMTGHLTARSDVYSFGVVLLELLTGRKSIDKSRPSREQSLVDWALPKLND 738
GT GYAAPEY+ TGHLT +SDVY++GVVLLELLTG++++DK+RP + +LV+WA P +N
Sbjct: 183 GTQGYAAPEYLATGHLTTKSDVYTYGVVLLELLTGQRALDKNRPPGQHNLVEWARPYINS 362
Query: 737 KRRLLQIIDPRLEGQYSARAAHKSCSLAFYCLSQNPKARPLMSDVVETLAPL 582
KRR++ ++DPRL QYS AA K+ +LA CLS + + RP M VV L L
Sbjct: 363 KRRVIHVLDPRLGSQYSLPAAQKAAALAMQCLSMDARCRPDMDQVVTVLQKL 518
Score = 144 bits (310), Expect = 1e-033
Identities = 79/141 (56%), Positives = 94/141 (66%)
Frame = +1 / -3
Query: 676 AALAEYCPSSLGSMIWRSLLLSLSFGSAQSTRLCSLLGRDLSIDLRPVRSSSRTTPKLYT 855
AA +EYC + GS W +LLL L G A STRLC GR LS PV +S RTTP + T
Sbjct: 424 AAGSEYCDPNRGSRTWMTLLLLLM*GLAHSTRLCCPGGRFLSRARCPVSNSRRTTP*V*T 245
Query: 856 SLRAVK*PVITYSGAA*P*VPITRVDTCV*SPSGPSFARPKSDSLAV*SESSRMFDVLKS 1035
SL VK PV YSGAA P*VP+T V+T + SP GPSFA+PKS+S A+ SES R +VLKS
Sbjct: 244 SLFVVKWPVARYSGAAYP*VPMTLVET*LLSPLGPSFAKPKSESFALYSESRRTLEVLKS 65
Query: 1036 L*MTGL*ALWRQASPLAAPSA 1098
+T +L R+ASPLAA A
Sbjct: 64 RYITLASSLCRKASPLAASRA 2
>gb|BQ768749.1|BQ768749 EBro08_SQ012_G15_R root, 3 week, drought-stressed, cv Optic, EBro08
Hordeum vulgare subsp. vulgare cDNA clone
EBro08_SQ012_G15 5', mRNA sequence
Length = 635
Score = 175 bits (376), Expect(4) = 8e-068
Identities = 71/108 (65%), Positives = 89/108 (82%)
Frame = -1 / +1
Query: 1052 RPVIYRDFKTSNILLDSDYTAKLSDFGLAKDGPEGDQTHVSTRVMGTYGYAAPEYVMTGH 873
R VI+RD K+SN+LL D+ AKLSDFGLA+ GP G ++HVSTRV+GT GYAAPEYV TGH
Sbjct: 172 RDVIFRDLKSSNVLLGPDHRAKLSDFGLARAGPTGGKSHVSTRVVGTRGYAAPEYVATGH 351
Query: 872 LTARSDVYSFGVVLLELLTGRKSIDKSRPSREQSLVDWALPKLNDKRR 729
L+A+SDVY FGVVLLEL+TGR+++D+SR + LVDWA+P L +RR
Sbjct: 352 LSAKSDVYGFGVVLLELMTGRRALDESRGLASELLVDWAMPMLQGERR 495
Score = 95.9 bits (203), Expect(4) = 7e-029
Identities = 55/101 (54%), Positives = 61/101 (60%)
Frame = +1 / -1
Query: 745 SFGSAQSTRLCSLLGRDLSIDLRPVRSSSRTTPKLYTSLRAVK*PVITYSGAA*P*VPIT 924
S G AQST RD S RPV SSS TTPK TSL A + PV TYSGAA*P VP T
Sbjct: 479 SIGIAQSTSSSDARPRDSSSARRPVMSSSSTTPKP*TSLLAERWPVATYSGAA*PRVPTT 300
Query: 925 RVDTCV*SPSGPSFARPKSDSLAV*SESSRMFDVLKSL*MT 1047
RV+T P GP+ ARPKS+SLA S + L+S MT
Sbjct: 299 RVETWDLPPVGPALARPKSESLARWSGPRSTLEDLRSRKMT 177
Score = 54.2 bits (112), Expect(4) = 8e-068
Identities = 20/47 (42%), Positives = 32/47 (68%)
Frame = -1 / +1
Query: 740 DKRRLLQIIDPRLEGQYSARAAHKSCSLAFYCLSQNPKARPLMSDVV 600
++R++++++D RL GQY R A +LA CL +PK+RP M+D V
Sbjct: 487 ERRKVIRVMDTRLGGQYPKRQAQDMAALALRCLQNDPKSRPFMADDV 627
Score = 47.3 bits (97), Expect(4) = 8e-068
Identities = 18/27 (66%), Positives = 23/27 (85%)
Frame = -1 / +1
Query: 1205 DDHRLLVYEFMFRGSLENHLFRKTATP 1125
D ++LLVYE+M RGSLENHLFR+ + P
Sbjct: 22 DSNKLLVYEYMPRGSLENHLFRRGSQP 102
Score = 39.1 bits (79), Expect(4) = 8e-068
Identities = 13/28 (46%), Positives = 21/28 (75%)
Frame = -1 / +1
Query: 1142 RKTATPLPWGTRMSIALGAAKGLACLHN 1059
R + PLPW TR+++A+ A+G+A LH+
Sbjct: 88 RGSQPPLPWSTRVAVAVDVARGIAFLHS 171
Score = 32.2 bits (64), Expect(4) = 7e-029
Identities = 16/38 (42%), Positives = 21/38 (55%)
Frame = +3 / -3
Query: 594 GLDDVAHERPGLWVLAQAVEREAAGLVSGSGRVLPLQP 707
G D V HER L V+ +A ERE ++ VLP +P
Sbjct: 633 GQDVVGHERAALGVVLEASEREGGHVLRLPLGVLPAEP 520
Score = 30.4 bits (60), Expect(4) = 7e-029
Identities = 10/12 (83%), Positives = 11/12 (91%)
Frame = +1 / -1
Query: 1141 RNKWFSRLPRNM 1176
RN+WFSRLPR M
Sbjct: 86 RNRWFSRLPRGM 51
Score = 24.9 bits (48), Expect(4) = 7e-029
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = +1 / -1
Query: 1063 WRQASPLAAPSAIDILVPQGNG 1128
WR+A P A +A V QG+G
Sbjct: 167 WRKAMPRATSTATATRVDQGSG 102
>gb|BG366053.1|BG366053 HVSMEi0005A08f Hordeum vulgare 20 DAP spike EST library HVcDNA0010
(20 DAP) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEi0005A08f, mRNA sequence
Length = 958
Score = 223 bits (482), Expect(3) = 5e-064
Identities = 91/152 (59%), Positives = 113/152 (74%)
Frame = -1 / +2
Query: 1142 RKTATPLPWGTRMSIALGAAKGLACLHNAQRPVIYRDFKTSNILLDSDYTAKLSDFGLAK 963
R + PL W R +ALGAAK +A LH+ + +I RD K+SNILLDSDYTAKLSDFG A
Sbjct: 41 RGSCEPLAWNLRTKVALGAAKAIAYLHSTEAKIIVRDVKSSNILLDSDYTAKLSDFGFAT 220
Query: 962 DGPEGDQTHVSTRVMGTYGYAAPEYVMTGHLTARSDVYSFGVVLLELLTGRKSIDKSRPS 783
DGP G+++HVST V+GTYGYAAPEY+ TGHLT + D Y FGVVLLE+L+GR+ ID++RP
Sbjct: 221 DGPVGEKSHVSTMVVGTYGYAAPEYITTGHLTQKCDTYGFGVVLLEMLSGRRVIDRNRPR 400
Query: 782 REQSLVDWALPKLNDKRRLLQIIDPRLEGQYS 687
EQ LV+WA P L K ++ +ID L G YS
Sbjct: 401 EEQKLVEWARPYLIHKHKIRCVIDASLGGLYS 496
Score = 124 bits (266), Expect = 1e-027
Identities = 73/143 (51%), Positives = 85/143 (59%)
Frame = +1 / -2
Query: 682 LAEYCPSSLGSMIWRSLLLSLSFGSAQSTRLCSLLGRDLSIDLRPVRSSSRTTPKLYTSL 861
L EY P L SM R L L + +G A ST CS LGR S+ RP S TTPK S
Sbjct: 501 LNEYRPPRLASMTQRILCLCMRYGLAHSTSFCSSLGRFRSMTRRPDNISRSTTPKP*VSH 322
Query: 862 RAVK*PVITYSGAA*P*VPITRVDTCV*SPSGPSFARPKSDSLAV*SESSRMFDVLKSL* 1041
V+*PV+ YSGAA*P VP T VDT + SP+GPS A PKS S AV*S S R+ ++L SL
Sbjct: 321 FCVR*PVVIYSGAA*PYVPTTIVDT*LFSPTGPSVANPKSLSFAV*SLSRRILELLTSLT 142
Query: 1042 MTGL*ALWRQASPLAAPSAIDIL 1110
+ L R A AAPSA +L
Sbjct: 141 IIFASVL*R*AIAFAAPSATFVL 73
Score = 37.3 bits (75), Expect(3) = 5e-064
Identities = 16/30 (53%), Positives = 17/30 (56%)
Frame = -1 / +1
Query: 680 AAHKSCSLAFYCLSQNPKARPLMSDVVETL 591
A HK LAF CL +PK RP M VV L
Sbjct: 505 AGHKIAGLAFECLWLDPKRRPTMDSVVSVL 594
Score = 24.0 bits (46), Expect(3) = 5e-064
Identities = 9/12 (75%), Positives = 10/12 (83%)
Frame = -1 / +2
Query: 1178 FMFRGSLENHLF 1143
F+ RGSLE HLF
Sbjct: 2 FLPRGSLEEHLF 37
>gb|BE603119.2|BE603119 HVSMEh0102B06f Hordeum vulgare 5-45 DAP spike EST library HVcDNA0009
(5 to 45 DAP) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEh0102B06f, mRNA sequence
Length = 525
Score = 243 bits (526), Expect = 2e-063
Identities = 93/165 (56%), Positives = 131/165 (79%)
Frame = -1 / +2
Query: 1073 ACLHNAQRPVIYRDFKTSNILLDSDYTAKLSDFGLAKDGPEGDQTHVSTRVMGTYGYAAP 894
A LH +++ VIYRDFK SNILLD+ Y AKLSDFGLAK GP G +H++TRVMGTYGYAAP
Sbjct: 2 AFLHASEKQVIYRDFKASNILLDASYNAKLSDFGLAKLGPTGSNSHITTRVMGTYGYAAP 181
Query: 893 EYVMTGHLTARSDVYSFGVVLLELLTGRKSIDKSRPSREQSLVDWALPKLNDKRRLLQII 714
EYV TGHL +SDVY FGVV+LE+L+G++++D +RP+ +QSL DWA P L D+R+L +++
Sbjct: 182 EYVATGHLYVKSDVYGFGVVMLEMLSGKRALDPNRPNGQQSLADWAKPYLADRRKLARLM 361
Query: 713 DPRLEGQYSARAAHKSCSLAFYCLSQNPKARPLMSDVVETLAPLQ 579
DP+ EGQY+++ ++++ L CL+ P++RP M +V+ETL ++
Sbjct: 362 DPQFEGQYNSKQSYQAAQLTLNCLAGEPRSRPSMKEVLETLEQIE 496
Score = 84.0 bits (177), Expect(2) = 4e-022
Identities = 56/112 (50%), Positives = 60/112 (53%)
Frame = +1 / -1
Query: 595 VSTTSLMSGLAFGFWLRQ*NARLQDL*AALAEYCPSSLGSMIWRSLLLSLSFGSAQSTRL 774
VS TS + GL G RQ + * L Y PS+ GS+ S L S G AQS RL
Sbjct: 480 VSRTSFIEGLLLGSPARQFSVSWAAW*DCLELYWPSN*GSIRRASFLRSAK*GFAQSARL 301
Query: 775 CSLLGRDLSIDLRPVRSSSRTTPKLYTSLRAVK*PVITYSGAA*P*VPITRV 930
C LGR S P SS TTPK TSL K PV TYSGAA P*VPIT V
Sbjct: 300 CCPLGRLGSSARLPDSISSITTPKP*TSLLTYKWPVATYSGAAYP*VPITLV 145
Score = 41.8 bits (85), Expect(2) = 4e-022
Identities = 19/33 (57%), Positives = 24/33 (72%)
Frame = +1 / -1
Query: 949 PSGPSFARPKSDSLAV*SESSRMFDVLKSL*MT 1047
P GPS A PKS+S A+* S R+ + LKSL*+T
Sbjct: 126 PVGPSLASPKSESFAL*LASRRILEALKSL*IT 28
>gb|BJ463997.1|BJ463997 BJ463997 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags31g03 5', mRNA sequence
Length = 511
Score = 228 bits (492), Expect(2) = 2e-062
Identities = 90/132 (68%), Positives = 113/132 (85%)
Frame = -1 / +3
Query: 977 FGLAKDGPEGDQTHVSTRVMGTYGYAAPEYVMTGHLTARSDVYSFGVVLLELLTGRKSID 798
FGLAKDGP GD+THVSTRVMGTYGYAAPEYVMTGHLT++SDVYSFGVVLLE+++GR+S+D
Sbjct: 72 FGLAKDGPVGDKTHVSTRVMGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEMMSGRRSMD 251
Query: 797 KSRPSREQSLVDWALPKLNDKRRLLQIIDPRLEGQYSARAAHKSCSLAFYCLSQNPKARP 618
K+RP+ E +LV+WA P L +++R +++DPRLEG +S + A K+ LA CLS++PKARP
Sbjct: 252 KNRPNGEHNLVEWARPLLGERQRFYKLVDPRLEGNFSVKGAQKAAQLARACLSRDPKARP 431
Query: 617 LMSDVVETLAPL 582
LMS VVE L PL
Sbjct: 432 LMSQVVEALKPL 467
Score = 138 bits (297), Expect = 6e-032
Identities = 79/138 (57%), Positives = 85/138 (61%)
Frame = +1 / -1
Query: 583 NGARVSTTSLMSGLAFGFWLRQ*NARLQDL*AALAEYCPSSLGSMIWRSLLLSLSFGSAQ 762
+G R STT L+ G A G LR A A L E PS GS + LS G A
Sbjct: 466 SGFRASTTWLIRGRALGSRLRHARANCAAFWAPLTEKFPSRRGSTNL*NRCLSPRRGRAH 287
Query: 763 STRLCSLLGRDLSIDLRPVRSSSRTTPKLYTSLRAVK*PVITYSGAA*P*VPITRVDTCV 942
STRLCS GR LSIDLRP SS TTPKL TSL VK PV+TYSGAA*P*VPITRVDT V
Sbjct: 286 STRLCSPFGRFLSIDLRPDIISSSTTPKL*TSLFDVKWPVMTYSGAA*P*VPITRVDT*V 107
Query: 943 *SPSGPSFARPKSDSLAV 996
SP+GPS A PK L +
Sbjct: 106 LSPTGPSLASPKX*ELCI 53
Score = 32.2 bits (64), Expect(2) = 2e-062
Identities = 13/13 (100%), Positives = 13/13 (100%)
Frame = -1 / +1
Query: 1046 VIYRDFKTSNILL 1008
VIYRDFKTSNILL
Sbjct: 1 VIYRDFKTSNILL 39
>gb|BM370583.2|BM370583 EBro08_SQ004_K14_R root, 3 week, drought-stressed, cv Optic, EBro08
Hordeum vulgare subsp. vulgare cDNA clone
EBro08_SQ004_K14 5', mRNA sequence
Length = 427
Score = 237 bits (511), Expect(2) = 5e-062
Identities = 98/132 (74%), Positives = 116/132 (87%)
Frame = -1 / +3
Query: 1109 RMSIALGAAKGLACLHNAQRPVIYRDFKTSNILLDSDYTAKLSDFGLAKDGPEGDQTHVS 930
R++IA+GA KGLA LH+A++PVIYRDFK SNILLDSD KLSDFGLAKDGPEGD THVS
Sbjct: 3 RLNIAVGAGKGLAFLHDAEKPVIYRDFKGSNILLDSDNKPKLSDFGLAKDGPEGDNTHVS 182
Query: 929 TRVMGTYGYAAPEYVMTGHLTARSDVYSFGVVLLELLTGRKSIDKSRPSREQSLVDWALP 750
TRVMGT+GY APEY+MTGHLTA+SDVYSFGVVLLE+L+GR S+DK+RPSREQ+LV++A P
Sbjct: 183 TRVMGTHGYTAPEYIMTGHLTAKSDVYSFGVVLLEILSGRHSVDKTRPSREQNLVEYARP 362
Query: 749 KLNDKRRLLQII 714
L D +L + I
Sbjct: 363 GLRDPLKLARRI 398
Score = 174 bits (374), Expect(2) = 4e-043
Identities = 84/125 (67%), Positives = 92/125 (73%)
Frame = +1 / -1
Query: 727 SLLLSLSFGSAQSTRLCSLLGRDLSIDLRPVRSSSRTTPKLYTSLRAVK*PVITYSGAA* 906
SL SLS G A STR CSLLGR LS + RP R SS TTPKLYTSL AV+ PV+ YSGA *
Sbjct: 385 SLSGSLSPGRAYSTRFCSLLGRVLSTECRPERISSSTTPKLYTSLLAVRWPVMMYSGAV* 206
Query: 907 P*VPITRVDTCV*SPSGPSFARPKSDSLAV*SESSRMFDVLKSL*MTGL*ALWRQASPLA 1086
P VP+TRVDTCV SPSGPS A PKSDS + SES RM + LKS *MTG A WR ASP
Sbjct: 205 PWVPMTRVDTCVLSPSGPSLASPKSDSFGLLSESRRMLEPLKSR*MTGFSASWRNASPFP 26
Query: 1087 APSAI 1101
AP+A+
Sbjct: 25 APTAM 11
Score = 109 bits (233), Expect = 4e-023
Identities = 45/112 (40%), Positives = 68/112 (60%)
Frame = +3 / -3
Query: 765 HQALLPAGPRLVDRLAPRQELQQDHAEAVHVTPSSQVTGHHIFRGSITVGSHHPCRHMRL 944
HQ LLPA P LV R+ ++LQQ H + VHV +V H + R S+ +G+H P RH+R+
Sbjct: 347 HQVLLPARPGLVHRVPAGEDLQQHHPKTVHVALGREVARHDVLRRSVAMGAHDPRRHVRV 168
Query: 945 ITFRAIFCEAKVRQFGSIIGVQQNV*CLEISVDDGPLSVVEASEPFSGSQRD 1100
+ R + + +VRQ ++ V+++V E++VDD L VVE EP G+ D
Sbjct: 167 VALRPVLGQPEVRQLWLVVRVEEDVGAFEVAVDDRLLGVVEEREPLPGADGD 12
Score = 22.6 bits (43), Expect(2) = 5e-062
Identities = 8/11 (72%), Positives = 8/11 (72%)
Frame = -3 / +2
Query: 723 PDHRPEAGGAV 691
PDH P AGG V
Sbjct: 392 PDHGPGAGGPV 424
Score = 22.1 bits (42), Expect(2) = 4e-043
Identities = 10/15 (66%), Positives = 11/15 (73%)
Frame = +1 / -1
Query: 691 YCPSSLGSMIWRSLL 735
Y PSS GSMI R+ L
Sbjct: 424 YRPSSAGSMIRRASL 380
>gb|CA008493.1|CA008493 HU11C07r HU Hordeum vulgare subsp. vulgare cDNA clone HU11C07
5-PRIME, mRNA sequence
Length = 431
Score = 237 bits (513), Expect = 1e-061
Identities = 96/140 (68%), Positives = 112/140 (80%)
Frame = -1 / +3
Query: 1274 TEVNCLGQLRHPNLVKLIGYCCEDDHRLLVYEFMFRGSLENHLFRKTATPLPWGTRMSIA 1095
+E+N LG+L HPNLVKL+GYC ED LLVYEFM +GSLENHLFRK PL W R+ IA
Sbjct: 12 SEINFLGRLSHPNLVKLLGYCWEDKELLLVYEFMAKGSLENHLFRKGCAPLSWELRLKIA 191
Query: 1094 LGAAKGLACLHNAQRPVIYRDFKTSNILLDSDYTAKLSDFGLAKDGPEGDQTHVSTRVMG 915
+GAA+GLA LH +++ VIYRDFK SNILLD+ Y AKLSDFGLAK GP G +H++TRVMG
Sbjct: 192 IGAARGLAFLHASEKQVIYRDFKASNILLDASYNAKLSDFGLAKLGPTGSNSHITTRVMG 371
Query: 914 TYGYAAPEYVMTGHLTARSD 855
TYGYAAPEYV T HL +SD
Sbjct: 372 TYGYAAPEYVATAHLYVKSD 431
Score = 95.9 bits (203), Expect(2) = 8e-023
Identities = 47/108 (43%), Positives = 61/108 (56%)
Frame = +1 / -2
Query: 949 PSGPSFARPKSDSLAV*SESSRMFDVLKSL*MTGL*ALWRQASPLAAPSAIDILVPQGNG 1128
P GPS A PKS+S A+* S R+ + LKSL*+T + ASP AAP AI L Q +G
Sbjct: 337 PVGPSLASPKSESFAL*LASRRILEALKSL*ITCFSDACKNASPRAAPMAIFSLSSQDSG 158
Query: 1129 VAVFRNKWFSRLPRNMNXXXXXXXXXXQQYPINFTKFGCLNCPRQLTS 1272
F +WFS+LP MN QQ P + T+FGC + P++ S
Sbjct: 157 AHPFLKRWFSKLPLAMNS*TSNSSLSSQQ*PNSLTRFGCESLPKKFIS 14
Score = 32.2 bits (64), Expect(2) = 8e-023
Identities = 17/25 (68%), Positives = 17/25 (68%)
Frame = +1 / -2
Query: 856 SLRAVK*PVITYSGAA*P*VPITRV 930
SL K V TYSGAA P*VPIT V
Sbjct: 430 SLLTYKWAVATYSGAAYP*VPITLV 356
>gb|BQ458306.1|BQ458306 HA05J18r HA Hordeum vulgare subsp. vulgare cDNA clone HA05J18
5-PRIME, mRNA sequence
Length = 587
Score = 121 bits (258), Expect(3) = 9e-058
Identities = 50/66 (75%), Positives = 55/66 (83%)
Frame = -1 / +2
Query: 1334 LPVAVKVLNKDGHQGHREWLTEVNCLGQLRHPNLVKLIGYCCEDDHRLLVYEFMFRGSLE 1155
+PVAVK LN +G QGHREWL EVN LGQ H NLVKLIGYC ED++RLLVYE M RGSLE
Sbjct: 239 IPVAVKRLNLEGLQGHREWLAEVNYLGQFCHQNLVKLIGYCLEDEYRLLVYECMPRGSLE 418
Query: 1154 NHLFRK 1137
NHLFR+
Sbjct: 419 NHLFRR 436
Score = 84.5 bits (178), Expect(3) = 9e-058
Identities = 34/45 (75%), Positives = 38/45 (84%)
Frame = -1 / +2
Query: 1127 PLPWGTRMSIALGAAKGLACLHNAQRPVIYRDFKTSNILLDSDYT 993
PL W RM +ALGAAKGLA LH+A+ VIYRDFKTSNILLD+DYT
Sbjct: 452 PLSWNLRMKVALGAAKGLAYLHSAEAKVIYRDFKTSNILLDTDYT 586
Score = 58.3 bits (121), Expect(3) = 9e-058
Identities = 28/62 (45%), Positives = 37/62 (59%)
Frame = -1 / +2
Query: 1541 SSDISDPSTPRKVEDAKNISIYNDVIAFTLFELETITKSFRVDYVLGEGGFGTVYKGYID 1362
SS S S P + I +V F+ +L T++FR D VLGEGGFG+VYKG+ID
Sbjct: 23 SSRASSASMPPSAKTECEILQSANVKVFSYNDLRLATRNFRPDSVLGEGGFGSVYKGWID 202
Query: 1361 EN 1356
E+
Sbjct: 203 EH 208
>gb|BU977391.1|BU977391 HA11F10r HA Hordeum vulgare subsp. vulgare cDNA clone HA11F10
5-PRIME, mRNA sequence
Length = 532
Score = 203 bits (437), Expect(2) = 1e-057
Identities = 81/139 (58%), Positives = 105/139 (75%)
Frame = -1 / +1
Query: 1058 AQRPVIYRDFKTSNILLDSDYTAKLSDFGLAKDGPEGDQTHVSTRVMGTYGYAAPEYVMT 879
A P+IYRD K +NILLD D++ KLSDFGLAK GP GD+THVSTRVMGTYGY AP+YV++
Sbjct: 115 ADPPIIYRDMKAANILLDEDFSPKLSDFGLAKVGPVGDRTHVSTRVMGTYGYCAPDYVVS 294
Query: 878 GHLTARSDVYSFGVVLLELLTGRKSIDKSRPSREQSLVDWALPKLNDKRRLLQIIDPRLE 699
G LT +SD+YSFGV+LLEL+TGR+ D SRP EQSL+ W+ P ++DKR+ ++ DP L
Sbjct: 295 GKLTMKSDIYSFGVLLLELITGRRIYDASRPKPEQSLLTWSRPFMHDKRKFHRLADPALR 474
Query: 698 GQYSARAAHKSCSLAFYCL 642
G Y A ++ ++ CL
Sbjct: 475 GSYPPSALNQLVVISIMCL 531
Score = 41.8 bits (85), Expect(2) = 1e-057
Identities = 16/29 (55%), Positives = 20/29 (68%)
Frame = -1 / +1
Query: 1127 PLPWGTRMSIALGAAKGLACLHNAQRPVI 1041
PL W TR+ IA+G A+GL+ LHN P I
Sbjct: 43 PLDWNTRVKIAVGVAEGLSYLHNVADPPI 129
>gb|BM370983.2|BM370983 EBro04_SQ003_C04_R root, 3 week, salt-stressed, cv Optic, EBro04
Hordeum vulgare subsp. vulgare cDNA clone
EBro04_SQ003_C04 5', mRNA sequence
Length = 670
Score = 223 bits (482), Expect = 2e-057
Identities = 90/140 (64%), Positives = 115/140 (82%)
Frame = -1 / +3
Query: 1001 DYTAKLSDFGLAKDGPEGDQTHVSTRVMGTYGYAAPEYVMTGHLTARSDVYSFGVVLLEL 822
DYTAKLSDFGLAKDGP GD THV+TR+MGT+GY +PEY+MTGHLTA+SDVYSFGVVLLEL
Sbjct: 42 DYTAKLSDFGLAKDGPNGDATHVTTRIMGTHGYFSPEYIMTGHLTAKSDVYSFGVVLLEL 221
Query: 821 LTGRKSIDKSRPSREQSLVDWALPKLNDKRRLLQIIDPRLEGQYSARAAHKSCSLAFYCL 642
++GR+SID++R SREQSLVD+A P L +L +++DP LE QYS + A + +A+ CL
Sbjct: 222 ISGRRSIDRARRSREQSLVDYARPYLKKHDKLHRVMDPALECQYSCQGAELAARVAYKCL 401
Query: 641 SQNPKARPLMSDVVETLAPL 582
S+N K+RP M +VV+ L P+
Sbjct: 402 SENSKSRPTMKEVVQALEPV 461
Score = 119 bits (254), Expect(2) = 3e-032
Identities = 64/105 (60%), Positives = 70/105 (66%)
Frame = +1 / -1
Query: 688 EYCPSSLGSMIWRSLLLSLSFGSAQSTRLCSLLGRDLSIDLRPVRSSSRTTPKLYTSLRA 867
EY S GSM +L L +G A STRLCSL R S+D RP SS RTTPKL TSL A
Sbjct: 355 EYWHSKAGSMTRCNLSCFLRYGLA*STRLCSLERRARSMDRRPEMSSRRTTPKL*TSLLA 176
Query: 868 VK*PVITYSGAA*P*VPITRVDTCV*SPSGPSFARPKSDSLAV*S 1002
V+ PV+ YSG P VP+ RV T V SP GPSFARPKSDS AV*S
Sbjct: 175 VRCPVMMYSGEKYPCVPMMRVVTWVASPLGPSFARPKSDSFAV*S 41
Score = 40.5 bits (82), Expect(2) = 3e-032
Identities = 20/40 (50%), Positives = 24/40 (60%)
Frame = +3 / -3
Query: 591 EGLDDVAHERPGLWVLAQAVEREAAGLVSGSGRVLPLQPR 710
+GL+D+ H RP L VLAQA R + G S RVL Q R
Sbjct: 452 QGLNDLLHGRPRLRVLAQAFVRHSCGQFSPLTRVLAFQSR 333
>gb|AL450804.1|AL450804 AL450804 Hordeum vulgare Barke etiolated leaves Hordeum vulgare
subsp. vulgare cDNA clone HK04F08u 5', mRNA sequence
Length = 627
Score = 105 bits (225), Expect(3) = 2e-057
Identities = 42/53 (79%), Positives = 43/53 (81%)
Frame = -1 / +2
Query: 1301 GHQGHREWLTEVNCLGQLRHPNLVKLIGYCCEDDHRLLVYEFMFRGSLENHLF 1143
G QGHREWL EVN LG L HPNLVKL GYC ED HRLLVYEF+ RGSLE HLF
Sbjct: 2 GVQGHREWLAEVNYLGHLSHPNLVKLFGYCLEDKHRLLVYEFLPRGSLEEHLF 160
Score = 99.6 bits (211), Expect(3) = 2e-057
Identities = 40/67 (59%), Positives = 49/67 (73%)
Frame = -1 / +2
Query: 1142 RKTATPLPWGTRMSIALGAAKGLACLHNAQRPVIYRDFKTSNILLDSDYTAKLSDFGLAK 963
R + PL W R +ALGAAK +A LH+ + +I RD K+SNILLDSDYTAKLSDFG A
Sbjct: 164 RGSCQPLAWNLRTKVALGAAKAIAYLHSTEAKIIVRDVKSSNILLDSDYTAKLSDFGFAT 343
Query: 962 DGPEGDQ 942
DGP G++
Sbjct: 344 DGPVGEE 364
Score = 57.0 bits (118), Expect(3) = 2e-057
Identities = 21/29 (72%), Positives = 25/29 (86%)
Frame = -1 / +1
Query: 944 QTHVSTRVMGTYGYAAPEYVMTGHLTARS 858
++HVST V+GTYGYAAPEY+ TGHLT S
Sbjct: 364 KSHVSTMVVGTYGYAAPEYITTGHLTQES 450
>gb|BM817316.1|BM817316 HC108A09_SK.ab1 HC Hordeum vulgare subsp. vulgare cDNA clone
HC108A09_SK.ab1 similar to Hydrogen
dehydrogenase,Cis-1,2-dihydroxycyclohexa-3,
5-diene-1-carboxylate dehydrogenase, mRNA sequence
Length = 888
Score = 120 bits (256), Expect(5) = 9e-057
Identities = 49/64 (76%), Positives = 53/64 (82%)
Frame = -1 / +3
Query: 1328 VAVKVLNKDGHQGHREWLTEVNCLGQLRHPNLVKLIGYCCEDDHRLLVYEFMFRGSLENH 1149
VAVK L D QGH+EWL EVN LGQL HPNLVKLIGYC ED+ RLLVYEFM RGSLE+H
Sbjct: 492 VAVKKLKLDSFQGHKEWLAEVNYLGQLSHPNLVKLIGYCLEDEQRLLVYEFMPRGSLEHH 671
Query: 1148 LFRK 1137
LFR+
Sbjct: 672 LFRR 683
Score = 65.7 bits (137), Expect(5) = 9e-057
Identities = 30/81 (37%), Positives = 47/81 (58%)
Frame = -1 / +3
Query: 1580 SKNANADRKHTCMSSDISDPSTPRKVEDAKNISIYNDVIAFTLFELETITKSFRVDYVLG 1401
SK+++++ T S S P K I +++ FT EL++ T++FR D +LG
Sbjct: 231 SKSSSSNATDTSTFGKSSSSSVPPTPRSEKEILQSSNLRKFTFSELKSCTRNFRTDSLLG 410
Query: 1400 EGGFGTVYKGYIDENVRVGLK 1338
EGGFG+V+KG+IDE +K
Sbjct: 411 EGGFGSVFKGWIDERTFTPVK 473
Score = 45.1 bits (92), Expect(5) = 9e-057
Identities = 18/23 (78%), Positives = 20/23 (86%)
Frame = -1 / +1
Query: 1031 FKTSNILLDSDYTAKLSDFGLAK 963
F+TSN+LLDS Y AKLSDFGL K
Sbjct: 793 FQTSNVLLDSGYNAKLSDFGLQK 861
Score = 35.9 bits (72), Expect(5) = 9e-057
Identities = 14/23 (60%), Positives = 16/23 (69%)
Frame = -1 / +3
Query: 1127 PLPWGTRMSIALGAAKGLACLHN 1059
PL W M +AL AAKGLA LH+
Sbjct: 699 PLSWNXXMKVALEAAKGLAFLHS 767
Score = 29.5 bits (58), Expect(5) = 9e-057
Identities = 10/14 (71%), Positives = 12/14 (85%)
Frame = -1 / +3
Query: 977 FGLAKDGPEGDQTH 936
F LAKDGP GD++H
Sbjct: 846 FWLAKDGPSGDKSH 887
>gb|BF261155.2|BF261155 HVSMEf0023O11f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEf0023O11f, mRNA sequence
Length = 748
Score = 118 bits (252), Expect(3) = 7e-056
Identities = 49/87 (56%), Positives = 63/87 (72%)
Frame = -1 / +3
Query: 1058 AQRPVIYRDFKTSNILLDSDYTAKLSDFGLAKDGPEGDQTHVSTRVMGTYGYAAPEYVMT 879
A+ +I+RD KT+NILLD + AK+SDFGL+K GP D THVST V G++GY PEY
Sbjct: 471 AKHTIIHRDVKTTNILLDEKWVAKVSDFGLSKTGPSMDHTHVSTVVKGSFGYLDPEYFRR 650
Query: 878 GHLTARSDVYSFGVVLLELLTGRKSID 798
LT +SDVYSFGVVL E+L R +++
Sbjct: 651 QQLTEKSDVYSFGVVLFEVLCARPALN 731
Score = 99.1 bits (210), Expect(3) = 7e-056
Identities = 42/96 (43%), Positives = 58/96 (60%)
Frame = -1 / +3
Query: 1328 VAVKVLNKDGHQGHREWLTEVNCLGQLRHPNLVKLIGYCCEDDHRLLVYEFMFRGSLENH 1149
VA+K N QG E+ TE+ L +LRH +LV LIGYC E + +LVY++M G+L H
Sbjct: 198 VAIKRGNPLSEQGIHEFQTEIEMLSKLRHRHLVSLIGYCEEKNEMILVYDYMAHGTLREH 377
Query: 1148 LFRKTATPLPWGTRMSIALGAAKGLACLHNAQRPVI 1041
L++ PL W R+ I +GAA+GL LH + I
Sbjct: 378 LYKTQNAPLSWRQRLEICIGAARGLHYLHTGAKHTI 485
Score = 40.0 bits (81), Expect(3) = 7e-056
Identities = 16/33 (48%), Positives = 21/33 (63%)
Frame = -1 / +3
Query: 1460 FTLFELETITKSFRVDYVLGEGGFGTVYKGYID 1362
F+ E++ TK+F +LG GGFG VY G ID
Sbjct: 84 FSFAEIKAATKNFDESRILGVGGFGKVYHGEID 182
>gb|AV928198.1|AV928198 AV928198 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp.
vulgare cDNA clone basd27f16 3', mRNA sequence
Length = 780
Score = 217 bits (468), Expect = 2e-055
Identities = 88/137 (64%), Positives = 109/137 (79%)
Frame = -1 / -1
Query: 992 AKLSDFGLAKDGPEGDQTHVSTRVMGTYGYAAPEYVMTGHLTARSDVYSFGVVLLELLTG 813
AKLSDFGLAKDGP GD++HVSTRVMGTYGYAAPEY+ TGHLT +SDVYSFGVVLLE+L+G
Sbjct: 759 AKLSDFGLAKDGPTGDKSHVSTRVMGTYGYAAPEYLATGHLTTKSDVYSFGVVLLEMLSG 580
Query: 812 RKSIDKSRPSREQSLVDWALPKLNDKRRLLQIIDPRLEGQYSARAAHKSCSLAFYCLSQN 633
R+++DK++P+ E +LV+WA P L KRR+ +++DPRL GQYS A K+ SLA CLS +
Sbjct: 579 RRAVDKNQPTGEHNLVEWARPYLTSKRRIFRVLDPRLGGQYSLAKAQKTASLALQCLSAD 400
Query: 632 PKARPLMSDVVETLAPL 582
+ RP M VV L L
Sbjct: 399 SRHRPSMEQVVVALEQL 349
Score = 126 bits (269), Expect = 4e-028
Identities = 69/132 (52%), Positives = 78/132 (59%)
Frame = +1 / +2
Query: 598 STTSLMSGLAFGFWLRQ*NARLQDL*AALAEYCPSSLGSMIWRSLLLSLSFGSAQSTRLC 777
+TT M GL R *+A A EYCP GS + L + +G A STRLC
Sbjct: 365 TTTCSMLGLCLESAERH*SASDAVFWALAREYCPPRRGSSTRKMRRLLVRYGRAHSTRLC 544
Query: 778 SLLGRDLSIDLRPVRSSSRTTPKLYTSLRAVK*PVITYSGAA*P*VPITRVDTCV*SPSG 957
S +G LS RP S RTTPKLYTSL V+ PV YSGAA P VPIT VDT + SP G
Sbjct: 545 SPVGWFLSTARRPDSISRRTTPKLYTSLFVVRWPVARYSGAAYPYVPITLVDTWLLSPVG 724
Query: 958 PSFARPKSDSLA 993
PSFARPKS+S A
Sbjct: 725 PSFARPKSESFA 760
>gb|CA019561.1|CA019561 HV12G05r HV Hordeum vulgare subsp. vulgare cDNA clone HV12G05
5-PRIME, mRNA sequence
Length = 479
Score = 127 bits (271), Expect(3) = 1e-054
Identities = 49/65 (75%), Positives = 57/65 (87%)
Frame = -1 / +2
Query: 1328 VAVKVLNKDGHQGHREWLTEVNCLGQLRHPNLVKLIGYCCEDDHRLLVYEFMFRGSLENH 1149
+AVK LN++ +QGHREWL EVN LGQL HPNLVKL+GYC ED+ RLLVYEFM RGSLENH
Sbjct: 137 IAVKKLNQESYQGHREWLAEVNYLGQLSHPNLVKLVGYCVEDEQRLLVYEFMPRGSLENH 316
Query: 1148 LFRKT 1134
LFR++
Sbjct: 317 LFRRS 331
Score = 73.9 bits (155), Expect(3) = 1e-054
Identities = 31/44 (70%), Positives = 35/44 (79%)
Frame = -1 / +2
Query: 1127 PLPWGTRMSIALGAAKGLACLHNAQRPVIYRDFKTSNILLDSDY 996
PL W RM IA GAAKGLA LH+ + VIYRDFKTSNILLD++Y
Sbjct: 344 PLSWNLRMKIAHGAAKGLAFLHSDKAKVIYRDFKTSNILLDANY 475
Score = 52.4 bits (108), Expect(3) = 1e-054
Identities = 20/29 (68%), Positives = 25/29 (86%)
Frame = -1 / +2
Query: 1445 LETITKSFRVDYVLGEGGFGTVYKGYIDE 1359
L T T++FR D VLGEGGFG+V+KG+IDE
Sbjct: 11 LRTATRNFRPDSVLGEGGFGSVFKGWIDE 97
>gb|AL504416.1|AL504416 AL504416 Hordeum vulgare Barke roots Hordeum vulgare subsp. vulgare
cDNA clone HW05D15V 5', mRNA sequence
Length = 699
Score = 132 bits (283), Expect(4) = 3e-054
Identities = 53/122 (43%), Positives = 83/122 (68%)
Frame = -1 / +1
Query: 950 GDQTHVSTRVMGTYGYAAPEYVMTGHLTARSDVYSFGVVLLELLTGRKSIDKSRPSREQS 771
G+++ + ++ GT GY APEY++ G LT +SDVY+FGVVLLELL GR+ ++K PS+ QS
Sbjct: 334 GNRSKGNLKLSGTLGYVAPEYLLDGKLTEKSDVYAFGVVLLELLLGRRPVEKMAPSQCQS 513
Query: 770 LVDWALPKLNDKRRLLQIIDPRLEGQYSARAAHKSCSLAFYCLSQNPKARPLMSDVVETL 591
+V WA+P+L D+ +L IIDP + + ++ ++A C+ P RPL++DV+ +L
Sbjct: 514 IVTWAMPQLIDRSKLPTIIDPVIRDTMDRKHLYQVAAVAVLCVQPEPSYRPLITDVLHSL 693
Query: 590 AP 585
P
Sbjct: 694 IP 699
Score = 53.3 bits (110), Expect(4) = 3e-054
Identities = 20/28 (71%), Positives = 26/28 (92%)
Frame = -1 / +1
Query: 1049 PVIYRDFKTSNILLDSDYTAKLSDFGLA 966
P+I+RD K+SNILL+SD+ AK+SDFGLA
Sbjct: 241 PIIHRDLKSSNILLNSDFNAKISDFGLA 324
Score = 53.3 bits (110), Expect(4) = 3e-054
Identities = 18/42 (42%), Positives = 30/42 (71%)
Frame = -1 / +1
Query: 1271 EVNCLGQLRHPNLVKLIGYCCEDDHRLLVYEFMFRGSLENHL 1146
E++ L +++H N+V L+G+C +++R +VYE M GSLE L
Sbjct: 13 ELDLLQRIQHSNIVSLVGFCIHEENRFIVYELMVNGSLETQL 138
Score = 30.9 bits (61), Expect(4) = 3e-054
Identities = 14/28 (50%), Positives = 15/28 (53%)
Frame = -1 / +1
Query: 1124 LPWGTRMSIALGAAKGLACLHNAQRPVI 1041
L W RM IAL A+GL LH P I
Sbjct: 163 LSWHIRMKIALDTARGLEYLHEHCNPPI 246
>gb|BM368926.2|BM368926 EBem07_SQ002_A13_R embryo, 28 DPA, no treatment, cv Optic, EBem07
Hordeum vulgare subsp. vulgare cDNA clone
EBem07_SQ002_A13 5', mRNA sequence
Length = 456
Score = 211 bits (456), Expect = 7e-054
Identities = 86/149 (57%), Positives = 110/149 (73%)
Frame = -1 / +2
Query: 950 GDQTHVSTRVMGTYGYAAPEYVMTGHLTARSDVYSFGVVLLELLTGRKSIDKSRPSREQS 771
GD+THVSTRVMGTYGYAAPEYVMTGHLT++SDVYSFGVVLLE+++GR+S+DK+RP+ E +
Sbjct: 2 GDKTHVSTRVMGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEMMSGRRSMDKNRPNGEHN 181
Query: 770 LVDWALPKLNDKRRLLQIIDPRLEGQYSARAAHKSCSLAFYCLSQNPKARPLMSDVVETL 591
LV+WA P L ++RR +++DPRLEG +S + A K+ LA CLS++PKARPLMS VVE L
Sbjct: 182 LVEWARPYLGERRRFYRLVDPRLEGNFSIKGAQKTAQLAHACLSRDPKARPLMSQVVEVL 361
Query: 590 APLQQXXXXXXXXXGLPDCRGRRRLTGNS 504
PL R R + N+
Sbjct: 362 KPLPNLKDMASSSYFFQSMRQERAASLNN 448
Score = 124 bits (266), Expect = 1e-027
Identities = 72/122 (59%), Positives = 76/122 (62%)
Frame = +1 / -1
Query: 586 GARVSTTSLMSGLAFGFWLRQ*NARLQDL*AALAEYCPSSLGSMIWRSLLLSLSFGSAQS 765
G R STT LM GLA G LRQ A *A E PS GS + LLS G A S
Sbjct: 366 GFRTSTTWLMRGLALGSRLRQACAS*AVF*APFMEKFPSRRGSTSL*NRLLSPR*GRAHS 187
Query: 766 TRLCSLLGRDLSIDLRPVRSSSRTTPKLYTSLRAVK*PVITYSGAA*P*VPITRVDTCV* 945
TRLCS G LSIDL P S TTPKLYTSL V+*PV+TYSGAA P VP+TRVDTCV
Sbjct: 186 TRLCSPFGLFLSIDLLPDIISRSTTPKLYTSLFDVR*PVMTYSGAAYPYVPMTRVDTCVL 7
Query: 946 SP 951
SP
Sbjct: 6 SP 1
>gb|CV059608.1|CV059608 BNEL4A2 Barley EST endosperm library Hordeum vulgare subsp. vulgare
cDNA clone BNEL4A2 5' similar to protein kinase,
putative, mRNA sequence
Length = 531
Score = 211 bits (455), Expect = 1e-053
Identities = 87/124 (70%), Positives = 101/124 (81%)
Frame = -1 / +3
Query: 950 GDQTHVSTRVMGTYGYAAPEYVMTGHLTARSDVYSFGVVLLELLTGRKSIDKSRPSREQS 771
GDQT VSTRVMGTYGYAAPEYVMTGHLTARSDVY FGVVLLE++ GR+++DKSRPSRE +
Sbjct: 6 GDQTQVSTRVMGTYGYAAPEYVMTGHLTARSDVYGFGVVLLEMIIGRRAVDKSRPSREHN 185
Query: 770 LVDWALPKLNDKRRLLQIIDPRLEGQYSARAAHKSCSLAFYCLSQNPKARPLMSDVVETL 591
LV+WA P L R+L +IIDPR+EGQYS +AA + SL + CLSQNPK RP MS V ET
Sbjct: 186 LVEWARPLLVHNRKLFRIIDPRMEGQYSTKAAIEVASLCYRCLSQNPKGRPTMSQVSETF 365
Query: 590 APLQ 579
+Q
Sbjct: 366 EEVQ 377
Score = 133 bits (286), Expect = 2e-030
Identities = 72/121 (59%), Positives = 80/121 (66%)
Frame = +1 / -3
Query: 589 ARVSTTSLMSGLAFGFWLRQ*NARLQDL*AALAEYCPSSLGSMIWRSLLLSLSFGSAQST 768
++VS T L+ G GFWL+ RL AA EY PS LGSMI +S L G A ST
Sbjct: 367 SKVSLTWLIVGRPLGFWLKHR*QRLATSMAAFVEY*PSILGSMILKSFRLWTRRGRAHST 188
Query: 769 RLCSLLGRDLSIDLRPVRSSSRTTPKLYTSLRAVK*PVITYSGAA*P*VPITRVDTCV*S 948
RLCS LGR LS L P+ S TTPK TSLRAVK PVITYSGAA*P*VP+TRV+T V S
Sbjct: 187 RLCSRLGRLLSTALLPIIISRSTTPKP*TSLRAVKWPVITYSGAA*P*VPMTRVETWVWS 8
Query: 949 P 951
P
Sbjct: 7 P 5
>gb|CK123889.1|CK123889 BES1824105o22 BES1824 Hordeum vulgare subsp. vulgare cDNA clone
MPMGp2010O225 5-PRIME, mRNA sequence
Length = 709
Score = 210 bits (454), Expect = 1e-053
Identities = 87/152 (57%), Positives = 111/152 (73%)
Frame = -1 / +1
Query: 1037 RDFKTSNILLDSDYTAKLSDFGLAKDGPEGDQTHVSTRVMGTYGYAAPEYVMTGHLTARS 858
RDFK+SNILL + KLSDFGLAK GP GD+THVSTRVMGTYGY APEY MTG LT +S
Sbjct: 1 RDFKSSNILLGEGFHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAPEYAMTGQLTVKS 180
Query: 857 DVYSFGVVLLELLTGRKSIDKSRPSREQSLVDWALPKLNDKRRLLQIIDPRLEGQYSARA 678
DVYSFGVV LEL+TGRK+ID ++P EQ+LV WA P D+R+ ++ DP L+G++ R
Sbjct: 181 DVYSFGVVFLELITGRKAIDNTKPQGEQNLVAWARPLFKDRRKFPKMADPMLQGRFPMRG 360
Query: 677 AHKSCSLAFYCLSQNPKARPLMSDVVETLAPL 582
+++ ++A CL + RP + DVV L+ L
Sbjct: 361 LYQALAVAAMCLQEQATTRPHIGDVVTALSYL 456
Score = 127 bits (273), Expect = 1e-028
Identities = 68/113 (60%), Positives = 74/113 (65%)
Frame = +1 / -3
Query: 697 PSSLGSMIWRSLLLSLSFGSAQSTRLCSLLGRDLSIDLRPVRSSSRTTPKLYTSLRAVK* 876
P S+GS I + L SL G A +TR CS G LSI LRPV SS +TTPKL TS V
Sbjct: 341 P*SIGSAILGNFLRSLKSGRAHATRFCSPWGLVLSIALRPVISSRKTTPKL*TSDFTVSC 162
Query: 877 PVITYSGAA*P*VPITRVDTCV*SPSGPSFARPKSDSLAV*SESSRMFDVLKS 1035
PVI YSGA P VPITRV+T V SP+GPSFARPKSDS RMFD LKS
Sbjct: 161 PVIAYSGAQYPYVPITRVET*VLSPTGPSFARPKSDSFG*NPSPRRMFDDLKS 3
>gb|BU995308.1|BU995308 HM09N12r HM Hordeum vulgare subsp. vulgare cDNA clone HM09N12
5-PRIME, mRNA sequence
Length = 410
Score = 209 bits (450), Expect = 5e-053
Identities = 86/123 (69%), Positives = 102/123 (82%)
Frame = -1 / +3
Query: 995 TAKLSDFGLAKDGPEGDQTHVSTRVMGTYGYAAPEYVMTGHLTARSDVYSFGVVLLELLT 816
TAKLSDFGLAK+GP GD THVSTRVMGT+GYAAPEY++TGHLTARSDVYSFGVVLLELLT
Sbjct: 39 TAKLSDFGLAKEGPSGDDTHVSTRVMGTHGYAAPEYILTGHLTARSDVYSFGVVLLELLT 218
Query: 815 GRKSIDKSRPSREQSLVDWALPKLNDKRRLLQIIDPRLEGQYSARAAHKSCSLAFYCLSQ 636
GR+S+DK R REQ+LVDWA P L +L +++DP LEG YS +AA K+ ++A+ CL
Sbjct: 219 GRRSVDKRRRGREQNLVDWARPYLRRPDKLHRVMDPSLEGSYSDQAAAKAVAVAYSCLHS 398
Query: 635 NPK 627
PK
Sbjct: 399 VPK 407
Score = 135 bits (289), Expect = 8e-031
Identities = 76/122 (62%), Positives = 78/122 (63%)
Frame = +1 / -2
Query: 631 GFWLRQ*NARLQDL*AALAEYCPSSLGSMIWRSLLLSLSFGSAQSTRLCSLLGRDLSIDL 810
G RQ A L AA +E PS LGSM SL G AQSTR CS R LS
Sbjct: 403 GTLCRQL*ATATALAAAWSE*LPSRLGSMTRCSLSGRRR*GRAQSTRFCSRPRRRLSTLR 224
Query: 811 RPVRSSSRTTPKLYTSLRAVK*PVITYSGAA*P*VPITRVDTCV*SPSGPSFARPKSDSL 990
RPV SSS TTPKLYTSL AV+ PV YSGAA*P VPITRVDTCV SP GPS A PKSDS
Sbjct: 223 RPVSSSSSTTPKLYTSLLAVRWPVRMYSGAA*PCVPITRVDTCVSSPDGPSLASPKSDSF 44
Query: 991 AV 996
AV
Sbjct: 43 AV 38
>gb|BI948235.1|BI948235 HVSMEl0008L10f Hordeum vulgare spike EST library HVcDNA0012 (Fusarium
infected) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEl0008L10f, mRNA sequence
Length = 1062
Score = 208 bits (449), Expect = 6e-053
Identities = 78/142 (54%), Positives = 113/142 (79%)
Frame = -1 / +1
Query: 1004 SDYTAKLSDFGLAKDGPEGDQTHVSTRVMGTYGYAAPEYVMTGHLTARSDVYSFGVVLLE 825
+ Y AKLSDFGLAK GP G +H++TRVMGTYGYAAPEYV TGHL +SDVYSFGVV+LE
Sbjct: 1 ASYNAKLSDFGLAKLGPTGSNSHITTRVMGTYGYAAPEYVATGHLYVKSDVYSFGVVMLE 180
Query: 824 LLTGRKSIDKSRPSREQSLVDWALPKLNDKRRLLQIIDPRLEGQYSARAAHKSCSLAFYC 645
+L+G++++D +RP+ +QSL DWA P L D+R+L +++DP+ EGQY+++ ++++ L C
Sbjct: 181 MLSGKRALDPNRPNGQQSLADWAKPYLADRRKLARLMDPQFEGQYNSKQSYQAAQLTLNC 360
Query: 644 LSQNPKARPLMSDVVETLAPLQ 579
L+ P++RP M +V+ETL ++
Sbjct: 361 LAGEPRSRPSMKEVLETLEQIE 426
>gb|BU979813.1|BU979813 HA17G16r HA Hordeum vulgare subsp. vulgare cDNA clone HA17G16
5-PRIME, mRNA sequence
Length = 465
Score = 207 bits (446), Expect = 2e-052
Identities = 85/136 (62%), Positives = 105/136 (77%)
Frame = -1 / +3
Query: 986 LSDFGLAKDGPEGDQTHVSTRVMGTYGYAAPEYVMTGHLTARSDVYSFGVVLLELLTGRK 807
LSDFGLAKDGP G+++HVSTRVMGTYGYAAPEY+ TGHLTA+SD+YSFGVVLLE+L+GR+
Sbjct: 3 LSDFGLAKDGPVGEKSHVSTRVMGTYGYAAPEYLSTGHLTAKSDIYSFGVVLLEMLSGRR 182
Query: 806 SIDKSRPSREQSLVDWALPKLNDKRRLLQIIDPRLEGQYSARAAHKSCSLAFYCLSQNPK 627
+IDK+RP E +LV+WA P L KR++ +++D RLEGQYS A +LA CLS K
Sbjct: 183 AIDKNRPQGEHNLVEWARPYLTHKRKIFRVLDTRLEGQYSLNGAQTIAALAVECLSFEAK 362
Query: 626 ARPLMSDVVETLAPLQ 579
RP M VV L +Q
Sbjct: 363 MRPSMEAVVSILEGIQ 410
Score = 127 bits (272), Expect = 2e-028
Identities = 70/136 (51%), Positives = 83/136 (61%)
Frame = +1 / -3
Query: 580 CNGARVSTTSLMSGLAFGFWLRQ*NARLQDL*AALAEYCPSSLGSMIWRSLLLSLSFGSA 759
C +R+ TT+ M GL R A + A +EY PSSL S L L + +G A
Sbjct: 409 CIPSRIETTASMDGLILASKDRHSTASAAIVCAPFSEYWPSSLVSRTRNILRLCVRYGRA 230
Query: 760 QSTRLCSLLGRDLSIDLRPVRSSSRTTPKLYTSLRAVK*PVITYSGAA*P*VPITRVDTC 939
STRLCS GR LS+ RP S+ TTPKL SL AV+ PV YSGAA*P VPIT VDT
Sbjct: 229 HSTRLCSPWGRFLSMARRPDSISNSTTPKL*MSLLAVRWPVDRYSGAA*PYVPITLVDT* 50
Query: 940 V*SPSGPSFARPKSDS 987
+ SP+GPSFA PKS+S
Sbjct: 49 LFSPTGPSFANPKSES 2
>gb|BJ464341.1|BJ464341 BJ464341 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags33o06 5', mRNA sequence
Length = 650
Score = 131 bits (280), Expect(2) = 5e-052
Identities = 54/100 (54%), Positives = 71/100 (71%)
Frame = -1 / +3
Query: 1052 RPVIYRDFKTSNILLDSDYTAKLSDFGLAKDGPEGDQTHVSTRVMGTYGYAAPEYVMTGH 873
+ +I+RD K++NILLD + AK++DFGL+K GPE DQTHVST V G++GY PEY
Sbjct: 321 KAIIHRDVKSANILLDENLLAKVADFGLSKTGPELDQTHVSTAVKGSFGYLDPEYFRRQQ 500
Query: 872 LTARSDVYSFGVVLLELLTGRKSIDKSRPSREQSLVDWAL 753
LT +SDVYSFGVV+LE+L R ID S P +L +W +
Sbjct: 501 LTEKSDVYSFGVVMLEVLCARPVIDPSLPREMVNLAEWGM 620
Score = 95.0 bits (201), Expect(2) = 5e-052
Identities = 42/96 (43%), Positives = 57/96 (59%)
Frame = -1 / +3
Query: 1328 VAVKVLNKDGHQGHREWLTEVNCLGQLRHPNLVKLIGYCCEDDHRLLVYEFMFRGSLENH 1149
VAVK N QG E+ TE+ L +LRH +LV LIGYC E + +LVYE+M G++++H
Sbjct: 42 VAVKRGNPKSQQGLNEFRTEIELLSRLRHRHLVSLIGYCDERNEMILVYEYMENGTVKSH 221
Query: 1148 LFRKTATPLPWGTRMSIALGAAKGLACLHNAQRPVI 1041
L+ L W R+ I +GAA+GL LH I
Sbjct: 222 LYGSDNPSLNWKQRLEICIGAARGLHYLHTGSAKAI 329
>gb|AL505017.1|AL505017 AL505017 Hordeum vulgare Barke roots Hordeum vulgare subsp. vulgare
cDNA clone HW07C03V 5', mRNA sequence
Length = 647
Score = 136 bits (291), Expect(2) = 2e-051
Identities = 56/71 (78%), Positives = 60/71 (84%)
Frame = -1 / +2
Query: 1049 PVIYRDFKTSNILLDSDYTAKLSDFGLAKDGPEGDQTHVSTRVMGTYGYAAPEYVMTGHL 870
PVIYRDFK+SNILL + KLSDFGLAK GP GD+THVSTRVMGTYGY APEY MTG L
Sbjct: 26 PVIYRDFKSSNILLGEGFHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAPEYAMTGQL 205
Query: 869 TARSDVYSFGV 837
T +SDVYSFGV
Sbjct: 206 TVKSDVYSFGV 238
Score = 89.0 bits (188), Expect(2) = 3e-025
Identities = 46/73 (63%), Positives = 50/73 (68%)
Frame = +1 / -3
Query: 832 RTTPKLYTSLRAVK*PVITYSGAA*P*VPITRVDTCV*SPSGPSFARPKSDSLAV*SESS 1011
+ TPKL TS V PVI YSGA P VPITRV+T V SP+GPSFARPKSDS
Sbjct: 243 KQTPKL*TSDFTVSCPVIAYSGAQYPYVPITRVET*VLSPTGPSFARPKSDSFG*NPSPR 64
Query: 1012 RMFDVLKSL*MTG 1050
RMFD LKS *+TG
Sbjct: 63 RMFDDLKSR*ITG 25
Score = 87.7 bits (185), Expect(2) = 2e-051
Identities = 35/85 (41%), Positives = 55/85 (64%)
Frame = -1 / +3
Query: 836 VLLELLTGRKSIDKSRPSREQSLVDWALPKLNDKRRLLQIIDPRLEGQYSARAAHKSCSL 657
V LEL+TGRK+ID ++P EQ+LV WA P D+R+ ++ DP L+G++ R +++ ++
Sbjct: 240 VFLELITGRKAIDNTKPQGEQNLVAWARPLFKDRRKFPKMADPMLQGRFPMRGLYQALAV 419
Query: 656 AFYCLSQNPKARPLMSDVVETLAPL 582
A CL + RP + DVV L+ L
Sbjct: 420 AAMCLQEQATTRPHIGDVVTALSYL 494
Score = 47.3 bits (97), Expect(2) = 3e-025
Identities = 25/47 (53%), Positives = 29/47 (61%)
Frame = +1 / -2
Query: 697 PSSLGSMIWRSLLLSLSFGSAQSTRLCSLLGRDLSIDLRPVRSSSRT 837
P S+GS I + L SL G A +TR CS G LSI LRPV SS +T
Sbjct: 379 P*SIGSAILGNFLRSLKSGRAHATRFCSPWGLVLSIALRPVISSRKT 239
>gb|AW982539.2|AW982539 HVSMEg0003I16f Hordeum vulgare pre-anthesis spike EST library
HVcDNA0008 (white to yellow anther) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEg0003I16f, mRNA sequence
Length = 933
Score = 97.7 bits (207), Expect(3) = 2e-049
Identities = 38/66 (57%), Positives = 49/66 (74%)
Frame = -1 / +3
Query: 947 DQTHVSTRVMGTYGYAAPEYVMTGHLTARSDVYSFGVVLLELLTGRKSIDKSRPSREQSL 768
+ THVSTRVMGT+GY APEY +G LT +SDV+SFGV+LLEL+T R+ + + + SL
Sbjct: 369 NNTHVSTRVMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELITERRPVSSKQAHMDDSL 548
Query: 767 VDWALP 750
DWA P
Sbjct: 549 XDWARP 566
Score = 95.0 bits (201), Expect(3) = 2e-049
Identities = 39/85 (45%), Positives = 55/85 (64%)
Frame = -1 / +3
Query: 1295 QGHREWLTEVNCLGQLRHPNLVKLIGYCCEDDHRLLVYEFMFRGSLENHLFRKTATPLPW 1116
QG RE+ EV+ + ++ H +LV L+GYC +D RLLVYEF+ +LE H+ + + W
Sbjct: 21 QGEREFQAEVDIISRVHHKHLVTLVGYCISEDKRLLVYEFVPNNTLEFHIHGRRGPTMDW 200
Query: 1115 GTRMSIALGAAKGLACLHNAQRPVI 1041
+R+ IALG+AKGLA LH P I
Sbjct: 201 PSRLRIALGSAKGLAYLHEDCHPKI 275
Score = 43.2 bits (88), Expect(3) = 2e-049
Identities = 18/28 (64%), Positives = 22/28 (78%)
Frame = -1 / +3
Query: 1046 VIYRDFKTSNILLDSDYTAKLSDFGLAK 963
+I+RD K SNILLD AK++DFGLAK
Sbjct: 273 IIHRDIKASNILLDYRCEAKVADFGLAK 356
>emb|AJ784275.3| Hordeum vulgare subsp. vulgare mRNA for putative lectin receptor-type
protein kinase (lrk1 gene)
Length = 2338
Score = 93.2 bits (197), Expect(5) = 5e-049
Identities = 41/96 (42%), Positives = 54/96 (56%)
Frame = -1 / +2
Query: 1328 VAVKVLNKDGHQGHREWLTEVNCLGQLRHPNLVKLIGYCCEDDHRLLVYEFMFRGSLENH 1149
VAVK L+ D QG +E++ EV +G LRH N+ +L+GYC LLVYE+M GSL+ +
Sbjct: 1187 VAVKRLSHDSRQGKKEFIAEVVSIGHLRHQNIARLLGYCRRKGEFLLVYEYMENGSLDKY 1366
Query: 1148 LFRKTATPLPWGTRMSIALGAAKGLACLHNAQRPVI 1041
L + L W R SI G A L LH V+
Sbjct: 1367 LHTRNGPTLCWSQRYSIIKGVASSLLYLHEEWEHVV 1474
Score = 65.2 bits (136), Expect(5) = 5e-049
Identities = 29/65 (44%), Positives = 37/65 (56%)
Frame = -1 / +2
Query: 932 STRVMGTYGYAAPEYVMTGHLTARSDVYSFGVVLLELLTGRKSIDKSRPSREQSLVDWAL 753
+T V GT GY APE TG T +DVY+FG+ LLE+ GRK I + + LV+W L
Sbjct: 1583 ATHVAGTIGYLAPELARTGRPTPFTDVYAFGMFLLEVTCGRKPIFTDKQNNRLLLVEWVL 1762
Query: 752 PKLND 738
D
Sbjct: 1763 EHHRD 1777
Score = 42.3 bits (86), Expect(5) = 5e-049
Identities = 18/28 (64%), Positives = 20/28 (71%)
Frame = -1 / +2
Query: 1046 VIYRDFKTSNILLDSDYTAKLSDFGLAK 963
VI+RD K SN+LLDS L DFGLAK
Sbjct: 1472 VIHRDIKPSNVLLDSKMNGWLGDFGLAK 1555
Score = 35.4 bits (71), Expect(5) = 5e-049
Identities = 14/46 (30%), Positives = 23/46 (50%)
Frame = -1 / +2
Query: 728 LLQIIDPRLEGQYSARAAHKSCSLAFYCLSQNPKARPLMSDVVETL 591
+L +DPRL+G+++ L C P RP+M V++ L
Sbjct: 1784 ILDTVDPRLQGEFNMEEVTIVLKLGLICTYPLPNMRPIMRKVMQYL 1921
Score = 33.6 bits (67), Expect(5) = 5e-049
Identities = 14/32 (43%), Positives = 20/32 (62%)
Frame = -1 / +2
Query: 1460 FTLFELETITKSFRVDYVLGEGGFGTVYKGYI 1365
F+ +L T+ F +LG GGFG+VYKG +
Sbjct: 1073 FSYKDLFHATEGFSDKNLLGRGGFGSVYKGVL 1168
>gb|BF254175.2|BF254175 HVSMEf0003D17f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEf0003D17f, mRNA sequence
Length = 786
Score = 145 bits (311), Expect(3) = 1e-048
Identities = 61/109 (55%), Positives = 81/109 (74%)
Frame = -1 / +3
Query: 1058 AQRPVIYRDFKTSNILLDSDYTAKLSDFGLAKDGPEGDQTHVSTRVMGTYGYAAPEYVMT 879
AQ VI+RD K+SN+LL + AK++DF L+ P+ STRV+GT+GY APEY MT
Sbjct: 306 AQPHVIHRDIKSSNVLLFDEDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPEYAMT 485
Query: 878 GHLTARSDVYSFGVVLLELLTGRKSIDKSRPSREQSLVDWALPKLNDKR 732
G L+++SDVYSFGVVLLELLTGRK +D + P +QSLV WA P+L++ +
Sbjct: 486 GQLSSKSDVYSFGVVLLELLTGRKPVDHTLPRGQQSLVTWATPRLSEDK 632
Score = 53.8 bits (111), Expect(3) = 1e-048
Identities = 21/50 (42%), Positives = 34/50 (68%)
Frame = -1 / +3
Query: 1295 QGHREWLTEVNCLGQLRHPNLVKLIGYCCEDDHRLLVYEFMFRGSLENHL 1146
Q +E L +V+ + +L+H N+V+L+GYC + + R+L YEF GSL + L
Sbjct: 45 QPDQELLAQVSMVSRLKHENVVELLGYCLDGNTRVLAYEFATMGSLHDML 194
Score = 34.1 bits (68), Expect(3) = 1e-048
Identities = 14/26 (53%), Positives = 17/26 (65%)
Frame = -1 / +3
Query: 1124 LPWGTRMSIALGAAKGLACLHNAQRP 1047
L W R+ IA+GAAKGL LH +P
Sbjct: 237 LSWIQRVKIAVGAAKGLEYLHEKAQP 314
>gb|BF267782.2|BF267782 HV_CEa0018O01f Hordeum vulgare seedling green leaf EST library
HVcDNA0004 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEa0018O01f, mRNA sequence
Length = 836
Score = 193 bits (416), Expect = 2e-048
Identities = 77/139 (55%), Positives = 98/139 (70%)
Frame = -1 / +3
Query: 1463 AFTLFELETITKSFRVDYVLGEGGFGTVYKGYIDENVRVGLKSLPVAVKVLNKDGHQGHR 1284
+F+L EL +T F Y+LGEGGFG V+KG++D +R GL+ PVAVK LN GHQGHR
Sbjct: 330 SFSLSELRGVTHDFSTGYLLGEGGFGAVHKGFVDAGMRPGLEPQPVAVKQLNIAGHQGHR 509
Query: 1283 EWLTEVNCLGQLRHPNLVKLIGYCCEDDHRLLVYEFMFRGSLENHLFRKTATPLPWGTRM 1104
EWL EV LGQ RH +L+KL+GYCC+D+ RLLVYEFM RG+L NHLF+K LPW T++
Sbjct: 510 EWLAEVIFLGQFRHQHLLKLLGYCCQDEERLLVYEFMPRGALYNHLFKKIFGTLPWCTKL 689
Query: 1103 SIALGAAKGLACLHNAQRP 1047
+ +G KG L + P
Sbjct: 690 KVGIGPRKGRGLLLGGKDP 746
>gb|CA009418.1|CA009418 HU14B03r HU Hordeum vulgare subsp. vulgare cDNA clone HU14B03
5-PRIME, mRNA sequence
Length = 660
Score = 193 bits (416), Expect = 2e-048
Identities = 79/138 (57%), Positives = 100/138 (72%)
Frame = -1 / +2
Query: 995 TAKLSDFGLAKDGPEGDQTHVSTRVMGTYGYAAPEYVMTGHLTARSDVYSFGVVLLELLT 816
T KLSDFGLAK GP GD THVSTRVMGTYGY APEY MTG LT +SDVYSFGVV LEL+T
Sbjct: 5 TRKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMTGQLTVKSDVYSFGVVFLELIT 184
Query: 815 GRKSIDKSRPSREQSLVDWALPKLNDKRRLLQIIDPRLEGQYSARAAHKSCSLAFYCLSQ 636
GRK+ID ++P EQ+LV WA P D+R+ ++ DP L+G++ R +++ ++A CL +
Sbjct: 185 GRKAIDNTKPHGEQNLVAWARPLFKDRRKFPKMADPSLQGRFPMRGLYQALAVAAMCLQE 364
Query: 635 NPKARPLMSDVVETLAPL 582
RP + DVV L+ L
Sbjct: 365 QAATRPFIGDVVTALSYL 418
Score = 126 bits (270), Expect = 3e-028
Identities = 65/100 (65%), Positives = 71/100 (71%)
Frame = +1 / -1
Query: 697 PSSLGSMIWRSLLLSLSFGSAQSTRLCSLLGRDLSIDLRPVRSSSRTTPKLYTSLRAVK* 876
P S GS I+ + L SL+ G A +TR CS G LSI LRPV SS TTPKLYTS V
Sbjct: 303 P*SDGSAIFGNFLRSLNRGRAHATRFCSP*GLVLSIALRPVISSRNTTPKLYTSDLTVSC 124
Query: 877 PVITYSGAA*P*VPITRVDTCV*SPSGPSFARPKSDSLAV 996
PVI YSGA *P*VPITRV+T V SP+GPSFARPKSDS V
Sbjct: 123 PVIAYSGAQ*P*VPITRVET*VLSPTGPSFARPKSDSFLV 4
Database: Hordeum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:16 PM
Number of letters in database: 175,134,539
Number of sequences in database: 312,970
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 787,502,231
Number of Sequences: 312970
Number of extensions: 14038116
Number of successful extensions: 113611
Number of sequences better than 1.0e-020: 432
length of database: 58,378,179
effective HSP length: 54
effective length of database: 41,477,799
effective search space used: 20531510505
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)