TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2419536.2.1
(1366 letters)
Database: Hordeum_nucl_with_EST.fasta
312,970 sequences; 175,134,539 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|AW982411.2|AW982411 HVSMEg0003D05f Hordeum vulgare pre-a... 319 8e-091
gb|BG343272.2|BG343272 HVSMEg0005E13f Hordeum vulgare pre-a... 198 2e-078
gb|BI956571.1|BI956571 HVSMEn0004D06f Hordeum vulgare rachi... 276 9e-078
gb|BF259471.1|BF259471 HVSMEf0019D06f Hordeum vulgare seedl... 271 7e-072
emb|X77467.1|HVOMET H.vulgare L. mRNA for flavonoid 7-O-met... 182 2e-070
gb|BU974771.1|BU974771 HB29A24r BC Hordeum vulgare subsp. v... 171 4e-062
gb|AV836790.1|AV836790 AV836790 K. Sato unpublished cDNA li... 165 1e-061
gb|BF628874.2|BF628874 HVSMEb0009A12f Hordeum vulgare seedl... 236 3e-061
gb|AV913364.1|AV913364 AV913364 K. Sato unpublished cDNA li... 232 5e-060
gb|AV918663.1|AV918663 AV918663 K. Sato unpublished cDNA li... 231 7e-060
gb|BM817329.1|BM817329 HC105E06_T3.ab1 HC Hordeum vulgare s... 180 4e-059
gb|BJ449787.1|BJ449787 BJ449787 K. Sato unpublished cDNA li... 170 1e-058
gb|CB879734.1|CB879734 HP03H10w HP Hordeum vulgare subsp. v... 171 7e-058
gb|CB877071.1|CB877071 HP03H10T HP Hordeum vulgare subsp. v... 171 1e-057
gb|BJ462654.1|BJ462654 BJ462654 K. Sato unpublished cDNA li... 181 6e-057
gb|BI957606.1|BI957606 HVSMEn0010F15f Hordeum vulgare rachi... 127 8e-056
gb|BI960501.1|BI960501 HVSMEn0024N01f Hordeum vulgare rachi... 122 1e-055
gb|AV917258.1|AV917258 AV917258 K. Sato unpublished cDNA li... 210 2e-053
gb|AV922427.1|AV922427 AV922427 K. Sato unpublished cDNA li... 210 2e-053
gb|BJ467760.1|BJ467760 BJ467760 K. Sato unpublished cDNA li... 167 8e-053
gb|BJ457207.1|BJ457207 BJ457207 K. Sato unpublished cDNA li... 169 1e-052
gb|BI958645.1|BI958645 HVSMEn0016A21f Hordeum vulgare rachi... 111 3e-052
gb|BG344915.2|BG344915 HVSMEg0016N12f Hordeum vulgare pre-a... 109 7e-052
gb|AL503330.1|AL503330 AL503330 Hordeum vulgare Barke roots... 204 9e-052
gb|AL503735.1|AL503735 AL503735 Hordeum vulgare Barke roots... 202 3e-051
gb|BF259348.2|BF259348 HVSMEf0019F16f Hordeum vulgare seedl... 165 1e-050
gb|AV930320.1|AV930320 AV930320 K. Sato unpublished cDNA li... 155 2e-050
gb|BI959987.1|BI959987 HVSMEn0022M02f Hordeum vulgare rachi... 113 3e-047
gb|BM817346.1|BM817346 HC111F01_T3.ab1 HC Hordeum vulgare s... 171 6e-047
gb|AV918157.1|AV918157 AV918157 K. Sato unpublished cDNA li... 163 2e-046
gb|AV928262.1|AV928262 AV928262 K. Sato unpublished cDNA li... 143 2e-045
gb|BF264626.3|BF264626 HV_CEa0009O22f Hordeum vulgare seedl... 167 4e-045
gb|BJ466406.1|BJ466406 BJ466406 K. Sato unpublished cDNA li... 182 5e-045
gb|BI936373.1|BI936373 HVSMEa0019K09f Hordeum vulgare seedl... 122 8e-045
gb|BI778623.2|BI778623 EBro07_SQ003_N10_R root, 3 week, red... 181 1e-044
gb|CD662493.1|CD662493 UCRHV18_01ch06_b1 Drought-stressed D... 171 2e-044
gb|BQ662115.1|BQ662115 HR01K01u HR Hordeum vulgare subsp. v... 139 2e-044
gb|AV916317.1|AV916317 AV916317 K. Sato unpublished cDNA li... 179 4e-044
gb|BF253847.2|BF253847 HVSMEf0002E15f Hordeum vulgare seedl... 177 1e-043
gb|AV931831.1|AV931831 AV931831 K. Sato unpublished cDNA li... 132 2e-043
gb|AV928022.1|AV928022 AV928022 K. Sato unpublished cDNA li... 132 2e-043
gb|AV929439.1|AV929439 AV929439 K. Sato unpublished cDNA li... 136 2e-043
gb|BQ659524.1|BQ659524 HE01L03u HE Hordeum vulgare subsp. v... 160 3e-043
gb|CB879142.1|CB879142 HP11B09T HP Hordeum vulgare subsp. v... 175 4e-043
gb|AV930527.1|AV930527 AV930527 K. Sato unpublished cDNA li... 129 1e-042
gb|AV921748.1|AV921748 AV921748 K. Sato unpublished cDNA li... 133 1e-042
gb|BJ468231.1|BJ468231 BJ468231 K. Sato unpublished cDNA li... 133 1e-042
gb|BJ468058.1|BJ468058 BJ468058 K. Sato unpublished cDNA li... 174 1e-042
gb|CB879386.1|CB879386 HP02A07w HP Hordeum vulgare subsp. v... 172 4e-042
gb|BQ658222.1|BQ658222 HA05D15u HA Hordeum vulgare subsp. v... 124 6e-042
gb|AV931697.1|AV931697 AV931697 K. Sato unpublished cDNA li... 126 9e-042
gb|BF260928.2|BF260928 HVSMEf0023E24f Hordeum vulgare seedl... 171 1e-041
gb|CD662288.1|CD662288 UCRHV18_01aa10_b1 Drought-stressed D... 160 3e-041
gb|CD663812.1|CD663812 UCRHV18_06ch08_b1 Drought-stressed D... 160 3e-041
gb|AV921351.1|AV921351 AV921351 K. Sato unpublished cDNA li... 168 5e-041
gb|BJ468335.1|BJ468335 BJ468335 K. Sato unpublished cDNA li... 168 5e-041
gb|BJ463550.1|BJ463550 BJ463550 K. Sato unpublished cDNA li... 103 9e-041
gb|AV920383.1|AV920383 AV920383 K. Sato unpublished cDNA li... 126 2e-040
gb|AV918926.1|AV918926 AV918926 K. Sato unpublished cDNA li... 163 2e-039
gb|BF259414.3|BF259414 HVSMEf0019A18f Hordeum vulgare seedl... 162 3e-039
gb|BQ765268.1|BQ765268 EBro03_SQ006_N17_R root, 3 week, wat... 104 7e-039
gb|AV929534.1|AV929534 AV929534 K. Sato unpublished cDNA li... 160 1e-038
gb|BF256054.2|BF256054 HVSMEf0008J16f Hordeum vulgare seedl... 160 2e-038
gb|AV928023.1|AV928023 AV928023 K. Sato unpublished cDNA li... 134 3e-038
gb|AV918077.1|AV918077 AV918077 K. Sato unpublished cDNA li... 158 8e-038
gb|AV918703.1|AV918703 AV918703 K. Sato unpublished cDNA li... 158 8e-038
gb|AL504415.1|AL504415 AL504415 Hordeum vulgare Barke roots... 100 9e-038
gb|CD662211.1|CD662211 UCRHV18_01af07_b1 Drought-stressed D... 112 1e-037
gb|BI778179.2|BI778179 EBro07_SQ002_H05_R root, 3 week, red... 155 4e-037
gb|BI777619.2|BI777619 EBro08_SQ001_A05_R root, 3 week, dro... 153 3e-036
gb|AV920613.1|AV920613 AV920613 K. Sato unpublished cDNA li... 152 4e-036
gb|CD663190.1|CD663190 UCRHV18_04cf12_b1 Drought-stressed D... 107 5e-036
gb|AL504432.1|AL504432 AL504432 Hordeum vulgare Barke roots... 133 2e-035
gb|BF253494.2|BF253494 HVSMEf0001B12f Hordeum vulgare seedl... 95 2e-035
gb|CV060228.1|CV060228 BNEL55g8 Barley EST endosperm librar... 149 4e-035
gb|BJ467944.1|BJ467944 BJ467944 K. Sato unpublished cDNA li... 107 5e-035
gb|BE215581.1|BE215581 HV_CEb0008D04f Hordeum vulgare seedl... 136 2e-034
gb|AV927324.1|AV927324 AV927324 K. Sato unpublished cDNA li... 101 3e-034
gb|CD662527.1|CD662527 UCRHV18_02ba04_b1 Drought-stressed D... 101 3e-034
gb|BF255884.2|BF255884 HVSMEf0008B14f Hordeum vulgare seedl... 89 4e-034
gb|CD663904.1|CD663904 UCRHV18_07ab10_b1 Drought-stressed D... 105 6e-034
gb|BF254372.2|BF254372 HVSMEf0003M21f Hordeum vulgare seedl... 104 1e-033
gb|AV930452.1|AV930452 AV930452 K. Sato unpublished cDNA li... 134 1e-033
gb|BJ468232.1|BJ468232 BJ468232 K. Sato unpublished cDNA li... 101 3e-033
gb|BJ463768.1|BJ463768 BJ463768 K. Sato unpublished cDNA li... 142 4e-033
gb|BF257695.2|BF257695 HVSMEf0013J23f Hordeum vulgare seedl... 142 5e-033
gb|CV055785.1|CV055785 BNEL123d8 Barley EST endosperm libra... 126 5e-032
gb|BF260237.3|BF260237 HVSMEf0021H13f Hordeum vulgare seedl... 102 4e-031
gb|AV917949.1|AV917949 AV917949 K. Sato unpublished cDNA li... 90 1e-029
gb|AV930495.1|AV930495 AV930495 K. Sato unpublished cDNA li... 86 1e-029
gb|BF259032.2|BF259032 HVSMEf0017H09f Hordeum vulgare seedl... 130 2e-029
gb|AV930928.1|AV930928 AV930928 K. Sato unpublished cDNA li... 89 3e-029
gb|BF253960.2|BF253960 HVSMEf0002J18f Hordeum vulgare seedl... 88 5e-029
gb|BF258733.1|BF258733 HVSMEf0016I14f Hordeum vulgare seedl... 78 4e-028
gb|AL501392.1|AL501392 AL501392 Hordeum vulgare Barke roots... 125 7e-028
gb|AL450686.1|AL450686 AL450686 Hordeum vulgare Barke etiol... 124 9e-028
gb|CD663222.1|CD663222 UCRHV18_04db05_b1 Drought-stressed D... 124 1e-027
gb|CD663459.1|CD663459 UCRHV18_05cc01_b1 Drought-stressed D... 112 4e-027
gb|BI956453.1|BI956453 HVSMEn0003H10f Hordeum vulgare rachi... 75 7e-027
gb|AL505819.1|AL505819 AL505819 Hordeum vulgare Barke roots... 121 8e-027
gb|AL502790.1|AL502790 AL502790 Hordeum vulgare Barke roots... 120 2e-026
gb|AV917656.1|AV917656 AV917656 K. Sato unpublished cDNA li... 120 2e-026
gb|AV920163.1|AV920163 AV920163 K. Sato unpublished cDNA li... 120 2e-026
gb|AV930818.1|AV930818 AV930818 K. Sato unpublished cDNA li... 120 2e-026
gb|BJ466353.1|BJ466353 BJ466353 K. Sato unpublished cDNA li... 120 2e-026
gb|BJ466471.1|BJ466471 BJ466471 K. Sato unpublished cDNA li... 120 2e-026
gb|BJ466778.1|BJ466778 BJ466778 K. Sato unpublished cDNA li... 120 2e-026
gb|BJ468102.1|BJ468102 BJ468102 K. Sato unpublished cDNA li... 120 2e-026
gb|BQ471958.1|BQ471958 HV03P22r HV Hordeum vulgare subsp. v... 120 2e-026
gb|BQ472105.1|BQ472105 HV04G21r HV Hordeum vulgare subsp. v... 120 2e-026
gb|AV931161.1|AV931161 AV931161 K. Sato unpublished cDNA li... 70 2e-026
gb|AL500356.1|AL500356 AL500356 Hordeum vulgare Barke etiol... 75 2e-026
gb|AV918876.1|AV918876 AV918876 K. Sato unpublished cDNA li... 78 3e-026
gb|BI957415.1|BI957415 HVSMEn0009H02f Hordeum vulgare rachi... 119 4e-026
gb|BI959736.1|BI959736 HVSMEn0021B08f Hordeum vulgare rachi... 117 1e-025
gb|BI960224.1|BI960224 HVSMEn0023M14f Hordeum vulgare rachi... 117 1e-025
gb|BI960616.1|BI960616 HVSMEn0025G07f Hordeum vulgare rachi... 117 1e-025
gb|BQ662094.1|BQ662094 HR01I14u HR Hordeum vulgare subsp. v... 76 1e-025
gb|BF260117.2|BF260117 HVSMEf0021C12f Hordeum vulgare seedl... 114 1e-024
gb|AL502883.1|AL502883 AL502883 Hordeum vulgare Barke roots... 72 2e-024
gb|BI957639.1|BI957639 HVSMEn0010H12f Hordeum vulgare rachi... 79 3e-024
gb|AL505122.1|AL505122 AL505122 Hordeum vulgare Barke roots... 112 5e-024
gb|BF257029.2|BF257029 HVSMEf0011K17f Hordeum vulgare seedl... 112 5e-024
gb|BF624433.3|BF624433 HVSMEa0016B18f Hordeum vulgare seedl... 104 7e-024
gb|BF253443.2|BF253443 HVSMEf0001G23f Hordeum vulgare seedl... 70 2e-023
gb|AV918653.1|AV918653 AV918653 K. Sato unpublished cDNA li... 107 1e-022
gb|AV919708.1|AV919708 AV919708 K. Sato unpublished cDNA li... 107 1e-022
gb|BF260521.2|BF260521 HVSMEf0022D17f Hordeum vulgare seedl... 82 1e-022
gb|CB879533.1|CB879533 HP02J21w HP Hordeum vulgare subsp. v... 107 2e-022
gb|AV927543.1|AV927543 AV927543 K. Sato unpublished cDNA li... 65 6e-022
gb|AV926277.1|AV926277 AV926277 K. Sato unpublished cDNA li... 104 1e-021
gb|BF255126.2|BF255126 HVSMEf0006A10f Hordeum vulgare seedl... 104 1e-021
gb|BF256832.2|BF256832 HVSMEf0011C05f Hordeum vulgare seedl... 103 3e-021
gb|AV918498.1|AV918498 AV918498 K. Sato unpublished cDNA li... 103 3e-021
gb|AV921873.1|AV921873 AV921873 K. Sato unpublished cDNA li... 103 3e-021
gb|BF256785.2|BF256785 HVSMEf0011A04f Hordeum vulgare seedl... 102 5e-021
gb|BF260877.2|BF260877 HVSMEf0023C21f Hordeum vulgare seedl... 101 7e-021
gb|BM817348.1|BM817348 HC105H12_T3.ab1 HC Hordeum vulgare s... 101 7e-021
gb|AL503073.1|AL503073 AL503073 Hordeum vulgare Barke roots... 101 1e-020
gb|BF257679.2|BF257679 HVSMEf0013I17f Hordeum vulgare seedl... 101 1e-020
>gb|AW982411.2|AW982411 HVSMEg0003D05f Hordeum vulgare pre-anthesis spike EST library
HVcDNA0008 (white to yellow anther) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEg0003D05f, mRNA sequence
Length = 1041
Score = 319 bits (692), Expect(2) = 8e-091
Identities = 124/200 (62%), Positives = 157/200 (78%)
Frame = +2 / +3
Query: 386 SSQLAQTPLAAMVLDPTIVSPFSELGAWFQHELPDPCIFKHTHGRGIWELTKDDATFDAL 565
S+ + P+ + L P IVS FSELGAWFQH+LP+P +FK HG+ WE+ +A F+ +
Sbjct: 123 SASVNIVPVINLQLQPNIVSSFSELGAWFQHKLPEPDLFKLKHGKTFWEIAHHNAAFNTI 302
Query: 566 VNDGLASDSQLIVDVAIKQSAEVFQGISSLVDVGGGIGTAAQAISKAFPHVKCSVLDLAH 745
VND +ASDS+ ++D+AI++ VF+GI SLVDV GG G AAQAISK+FPH+KCSV+DL H
Sbjct: 303 VNDAMASDSRFLMDIAIRECGSVFEGIGSLVDVAGGHGGAAQAISKSFPHIKCSVMDLGH 482
Query: 746 VVAKAPTHTDVQFIAGDMFESIPPADAVLLKSVLHDWDHDDCVKILKNCKKAIPPREAGG 925
V+A AP+ TDVQ+IAGDMFESIP AD V LK ++HDW DDC+KILKNC KAI P++AGG
Sbjct: 483 VIAGAPSGTDVQYIAGDMFESIPQADVVFLKWIMHDWSDDDCIKILKNCNKAIAPKDAGG 662
Query: 926 KVIIINMVVGAGPSDMKHKE 985
KVII+NMVVG P D+KHKE
Sbjct: 663 KVIIVNMVVGGSPQDLKHKE 722
Score = 240 bits (518), Expect(2) = 2e-065
Identities = 117/194 (60%), Positives = 124/194 (63%)
Frame = -2 / -3
Query: 987 ISLCFMSDGPAPTTMFIIITFPPASLGGIAFLQFFSIFTQSSWSQSCKTDFNSTASAGGM 808
+SLCF S G PTTMF IITFPPAS G IA LQFFSI QSS QSC F T SA GM
Sbjct: 724 VSLCFRSWGLPPTTMFTIITFPPASFGAIALLQFFSILMQSSSLQSCIIHFRKTTSACGM 545
Query: 807 LSNMSPAINCTSV*VGAFATTWARSSTLHLTCGNAFEMAWAAVPMPPPTSTSELIPWKTS 628
LSNMSPA+ CTSV +GA A TW RS TLHL CGN F++A AA P PP TST E IP KT
Sbjct: 544 LSNMSPAMYCTSVPLGAPAMTWPRSITLHLMCGNDFDIACAAPPWPPATSTREPIPSKTL 365
Query: 627 ALCLMATSTMSWLSEANPSLTRASKVASSLVNSQMPRPCVCLKMHGSGSSCWNHAPSSEK 448
LMA S + LSEA SLT A SQ PC LK GSGS CWN APSSEK
Sbjct: 364 PHSLMAMSMRNRLSEAMASLTMVLNAALWWAISQKVLPCFNLKRSGSGSLCWNQAPSSEK 185
Query: 447 GETMVGSSTMAANG 406
ETM+G S G
Sbjct: 184 EETMLGWSCRLMTG 143
Score = 197 bits (425), Expect = 1e-049
Identities = 93/187 (49%), Positives = 115/187 (61%)
Frame = -1 / -2
Query: 985 LFVLHVRWPSSNYHVYYYHLSTGFSWRNSLFAILQYLHAVVMVPIMQDRLQQYGVCWWNA 806
LFVL V S N+HVY YHLS W +S AI Y AV++ PIM + L + +C WNA
Sbjct: 722 LFVLQVLGASPNHHVYNYHLSASIFWSDSFIAIF*YFDAVIVAPIMHNPL*KDNICLWNA 543
Query: 805 LKHVASDKLHVRVSWSLRNDVGKVQHATLDVRERL*DGLGRRTDAPTDVDERAYPLEDLC 626
LKHVA + LHV + S ND+ +V HA LDVRER L R T A +VD+ AY LED
Sbjct: 542 LKHVARNVLHVGATRSPGNDMAEVHHAALDVRERFRYCLCRPTMASGNVDQGAYTLEDAA 363
Query: 625 ALLDGNVDDELAVGSQPVVD*GVEGRVIFGQLPDASAVRVLEDARVWELVLEPRAELGEG 446
AL DG+V +E A+G V+D GVE R++ G P+ AV LE W+LVLEP E EG
Sbjct: 362 ALPDGDVHEEPAIGGHGVIDDGVECRIMVGYFPEGFAVLQLEKVWFWQLVLEPGPEFREG 183
Query: 445 GDDGWIE 425
GDD +E
Sbjct: 182 GDDVGLE 162
Score = 112 bits (240), Expect(2) = 2e-025
Identities = 65/144 (45%), Positives = 78/144 (54%)
Frame = +1 / +2
Query: 580 GFRQPTHRRRCHQAERRGLPGDKLARRRRWGHRYGGPSHLKGVPARQV*RAGPCPRRCEG 759
G R P HQ R+ L G +L RR +GG S+++ VPA QV R GP P C G
Sbjct: 317 GLR*PVPHGHRHQGVRQRLRGYRLPGRRCRRPWWGGTSNIEIVPAHQVQRDGPRPCHCRG 496
Query: 760 SNSHGRAIYRWRHV*EHSTSRRRTVEVGLA*LGP*RLREDTEELQKGYSSKRSRWKGDNN 939
S H RA++ RHV*EHST R +V A*L L ++T++LQ Y SKR KGDN
Sbjct: 497 S*WHRRAVHCGRHV*EHSTGRCCLSKVDYA*LERR*LHQNTKKLQ*SYRSKRCWRKGDNC 676
Query: 940 KHGSWSWAI*HEAQRDAGHIRCLY 1011
KHG W EAQRD LY
Sbjct: 677 KHGGWGKPPRPEAQRDPSLWSILY 748
Score = 109 bits (233), Expect = 3e-023
Identities = 61/126 (48%), Positives = 71/126 (56%)
Frame = -3 / -1
Query: 986 SLCASCQMAQLQLPCLLLSPFHRLLLEE*PFCNSSVSSRSRHGPNHARPTSTVRRLLVEC 807
SLCAS Q PCL LSPF + LLE * +CN V S NHA T + L VEC
Sbjct: 723 SLCASGLGGFPQPPCLQLSPFRQHLLER*LYCNFLVF*CSHRRSNHA*STLERQHLPVEC 544
Query: 806 SQTCRQR*IARPCELEPSQRRGQGPARYT*RAGTPLRWLGPPYRCPHRRRRASLSPGRPL 627
SQTCR + AR C EP Q G+GP+R T* AGT L PP+ +RR SL P R
Sbjct: 543 SQTCRPQCTARRCH*EPRQ*HGRGPSRCT*CAGTISILLVPPHHGLRQRRPGSLYPRRRC 364
Query: 626 RSA*WQ 609
R+ *W+
Sbjct: 363 RTP*WR 346
Score = 92.7 bits (196), Expect(2) = 1e-021
Identities = 53/99 (53%), Positives = 61/99 (61%)
Frame = +3 / +1
Query: 690 KPSQRRSRTSSVACWTLPTSLRRLQLTRTCNLSLATCLRAFHQQTPYC*SRSCMIGTMTT 869
K + RSRTSS A WT SL L + TC+ ATCLRAFH+Q *S CMIG T
Sbjct: 427 KQYRNRSRTSSAA*WTSAMSLPGLLVAPTCSTLRATCLRAFHRQMLSF*SGLCMIGATMT 606
Query: 870 A*RY*RIAKRLFLQEKPVER****TW*LELGHLT*STKR 986
A +Y*+IA +L LQ+ ER** *TW L T*STKR
Sbjct: 607 ASKY*KIAIKLSLQKMLAER**L*TWWLGEAPKT*STKR 723
Score = 35.4 bits (71), Expect(2) = 8e-091
Identities = 17/32 (53%), Positives = 18/32 (56%)
Frame = +2 / +3
Query: 293 FGTQQPRGGSDDDSEPVYTLTPVSRLLIGSQS 388
F QQP D E VYTLT VS LL+ S S
Sbjct: 36 FSVQQPSPRDDVQVELVYTLTAVSHLLVSSAS 131
Score = 30.9 bits (61), Expect(2) = 1e-021
Identities = 15/27 (55%), Positives = 16/27 (59%)
Frame = +3 / +1
Query: 534 *PKMTRPSTP*STTGWLPTANSSSTLP 614
*P + R STP S T W P A SS T P
Sbjct: 271 *PTIMRHSTPSSMTPWPPIAGSSWTSP 351
Score = 30.4 bits (60), Expect(2) = 2e-065
Identities = 12/17 (70%), Positives = 12/17 (70%)
Frame = -2 / -3
Query: 309 GCWVPKTLVVVSTRIRR 259
GCW KT VSTRIRR
Sbjct: 52 GCWTLKTPETVSTRIRR 2
Score = 27.6 bits (54), Expect(2) = 2e-025
Identities = 11/30 (36%), Positives = 14/30 (46%)
Frame = +1 / +2
Query: 292 LRHPXXXXXXXXXXXXXLHSHSSVSPPHRL 381
L+ P LH+HSSV PP +L
Sbjct: 35 LQRPAAQSKGRRPSGARLHTHSSVPPPRQL 124
>gb|BG343272.2|BG343272 HVSMEg0005E13f Hordeum vulgare pre-anthesis spike EST library
HVcDNA0008 (white to yellow anther) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEg0005E13f, mRNA sequence
Length = 992
Score = 198 bits (427), Expect(3) = 2e-078
Identities = 78/143 (54%), Positives = 106/143 (74%)
Frame = +2 / +2
Query: 386 SSQLAQTPLAAMVLDPTIVSPFSELGAWFQHELPDPCIFKHTHGRGIWELTKDDATFDAL 565
S+ + P+ + L P IVS FSELGAWFQH+LP+P +FK HG WE+ +A F+ +
Sbjct: 365 SASVNIVPVINLQLQPNIVSSFSELGAWFQHKLPEPDLFKLKHGXTFWEIAHHNAAFNTI 544
Query: 566 VNDGLASDSQLIVDVAIKQSAEVFQGISSLVDVGGGIGTAAQAISKAFPHVKCSVLDLAH 745
VND +ASDS+ ++D+AI++ VF+GI SL DV G G AAQAISK+FPH+KCSV+D H
Sbjct: 545 VNDAMASDSRXLMDIAIRECGSVFEGIXSLXDVAGSHGWAAQAISKSFPHIKCSVMDPRH 724
Query: 746 VVAKAPTHTDVQFIAGDMFESIP 814
V+A+AP+ TDVQ+IAG++ ES P
Sbjct: 725 VIARAPSGTDVQYIAGELVESXP 793
Score = 148 bits (318), Expect(2) = 1e-061
Identities = 80/171 (46%), Positives = 91/171 (53%)
Frame = -2 / -3
Query: 918 ASLGGIAFLQFFSIFTQSSWSQSCKTDFNSTASAGGMLSNMSPAINCTSV*VGAFATTWA 739
A++ A + SIF+ +S + GMLS SPA+ CTSV +GA A TW
Sbjct: 897 ANIPSAALYEGLSIFSIEQSCRSISNTHLGSHIVLGMLSTSSPAMYCTSVPLGARAMTWR 718
Query: 738 RSSTLHLTCGNAFEMAWAAVPMPPPTSTSELIPWKTSALCLMATSTMSWLSEANPSLTRA 559
S TLHL CGN F++A AA P P TS E IP KT LMA S LSEA SLT
Sbjct: 717 GSITLHLMCGNDFDIACAAHPWLPATSXREXIPSKTLPHSLMAMSMRXRLSEAMASLTMV 538
Query: 558 SKVASSLVNSQMPRPCVCLKMHGSGSSCWNHAPSSEKGETMVGSSTMAANG 406
A SQ PC LK GSGS CWN APSSEK ETM+G S G
Sbjct: 537 LNAALWWAISQKVXPCFNLKRSGSGSLCWNQAPSSEKEETMLGWSCRLMTG 385
Score = 121 bits (259), Expect(2) = 1e-042
Identities = 60/130 (46%), Positives = 75/130 (57%)
Frame = -1 / -2
Query: 814 WNALKHVASDKLHVRVSWSLRNDVGKVQHATLDVRERL*DGLGRRTDAPTDVDERAYPLE 635
W AL A + LHV + S ND+ +V HA LDVRER L AP +V + AY LE
Sbjct: 793 WXALHQFARNVLHVGATRSPGNDMARVHHAALDVRERFRYCLCXPPMAPGNVXQGAYTLE 614
Query: 634 DLCALLDGNVDDELAVGSQPVVD*GVEGRVIFGQLPDASAVRVLEDARVWELVLEPRAEL 455
D AL DG+V + A+G V+D GVE R++ G P+ AV LE W+LVLEP E
Sbjct: 613 DAAALPDGDVHEXPAIGGHGVIDDGVECRIMVGYFPEGXAVLQLEKVWFWQLVLEPGPEF 434
Query: 454 GEGGDDGWIE 425
EGGDD +E
Sbjct: 433 REGGDDVGLE 404
Score = 109 bits (232), Expect(2) = 1e-061
Identities = 50/90 (55%), Positives = 59/90 (65%)
Frame = -2 / -3
Query: 309 GCWVPKTLVVVSTRIRRRRLETLDGWRWTLLSIWDRLAAPPWRWMASAIRRCIADLSAMD 130
GCW KT VSTRIRRRR + LDGW IW+R+AAPPW WMASA+ R D SA+D
Sbjct: 294 GCWTLKTPETVSTRIRRRRQQILDGWSVATAPIWERVAAPPWWWMASAMPRSKQDFSAID 115
Query: 129 FMNAKVVCQSSSCASSKLWSVLLLGLSSMI 40
K +CQSSS ASSK SV +S++I
Sbjct: 114 LT*PKEMCQSSS*ASSKP*SVRCSRVSTII 25
Score = 98.7 bits (209), Expect(3) = 2e-078
Identities = 43/66 (65%), Positives = 50/66 (75%)
Frame = +2 / +2
Query: 41 IMELSPNNSTDQSLLDAQLELWHTTFAFMKSMALKSAIHLRIADAIHLHGGAASLSQILS 220
IM L+ TDQ LLDAQLELWH +F ++KSMALKS + L IADAIH HGGAA+LSQI +
Sbjct: 26 IMVLTREQRTDQGLLDAQLELWHISFGYVKSMALKSCLDLGIADAIHHHGGAATLSQIGA 205
Query: 221 KVHLHP 238
LHP
Sbjct: 206 VATLHP 223
Score = 76.2 bits (160), Expect(2) = 1e-042
Identities = 37/85 (43%), Positives = 47/85 (55%)
Frame = -1 / -2
Query: 298 AEDIGGC*HAHQATEAGNSGRVEMDXXXXXXXXXXXAMEVDGIGNSEVYCGLERHGLHER 119
AED G H H+A +A + GRVE AM VDG+G++EV GL H
Sbjct: 283 AEDAGDSEHTHKAAQAADLGRVERSYSSNLGEGSGTAMVVDGVGDAEVQAGL*CH*FDVA 104
Query: 118 EGGVPELELRIEQALVRAVVGAELH 44
+G VPELEL IEQ L+ A++ E H
Sbjct: 103 KGDVPELELSIEQTLIGALLPGEHH 29
Score = 35.4 bits (71), Expect(3) = 2e-078
Identities = 17/32 (53%), Positives = 18/32 (56%)
Frame = +2 / +2
Query: 293 FGTQQPRGGSDDDSEPVYTLTPVSRLLIGSQS 388
F QQP D E VYTLT VS LL+ S S
Sbjct: 278 FSVQQPSPRDDVQVELVYTLTAVSHLLVSSAS 373
>gb|BI956571.1|BI956571 HVSMEn0004D06f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0004D06f, mRNA sequence
Length = 780
Score = 276 bits (597), Expect(2) = 9e-078
Identities = 111/193 (57%), Positives = 142/193 (73%)
Frame = +2 / +3
Query: 386 SSQLAQTPLAAMVLDPTIVSPFSELGAWFQHELPDPCIFKHTHGRGIWELTKDDATFDAL 565
S+ + P+ + L P IVS FSELGAWFQH+LP+P +FK HG+ WE+ +A F+ +
Sbjct: 141 SASVNIVPVINLQLQPNIVSSFSELGAWFQHKLPEPDLFKLKHGKTFWEIAHHNAAFNTI 320
Query: 566 VNDGLASDSQLIVDVAIKQSAEVFQGISSLVDVGGGIGTAAQAISKAFPHVKCSVLDLAH 745
VND +ASDS+ ++D+AI++ VF+GI SLVDV GG G AAQAISK+FPH+KCSV+DL H
Sbjct: 321 VNDAMASDSRFLMDIAIRECGSVFEGIGSLVDVAGGHGGAAQAISKSFPHIKCSVMDLGH 500
Query: 746 VVAKAPTHTDVQFIAGDMFESIPPADAVLLKSVLHDWDHDDCVKILKNCKKAIPPREAGG 925
V+A AP+ TDVQ+IAGDMFESIP AD V LK ++HDW DDC+KILKNC K + G
Sbjct: 501 VIAGAPSGTDVQYIAGDMFESIPQADVVFLKWIMHDWSDDDCIKILKNCIKLSLQKMLAG 680
Query: 926 KVIIINMVVGAGP 964
KVII+ VG P
Sbjct: 681 KVIIVXWWVGWRP 719
Score = 204 bits (440), Expect(2) = 2e-056
Identities = 103/186 (55%), Positives = 112/186 (60%)
Frame = -2 / -3
Query: 963 GPAPTTMFIIITFPPASLGGIAFLQFFSIFTQSSWSQSCKTDFNSTASAGGMLSNMSPAI 784
G PT IITFP + +F+QFFSI QSS QSC F T SA GMLSNMSPA+
Sbjct: 718 GLHPTHHXTIITFPASIFWSDSFMQFFSILMQSSSLQSCIIHFRKTTSACGMLSNMSPAM 539
Query: 783 NCTSV*VGAFATTWARSSTLHLTCGNAFEMAWAAVPMPPPTSTSELIPWKTSALCLMATS 604
CTSV +GA A TW RS TLHL CGN F++A AA P PP TST E IP KT LMA S
Sbjct: 538 YCTSVPLGAPAMTWPRSITLHLMCGNDFDIACAAPPWPPATSTREPIPSKTLPHSLMAMS 359
Query: 603 TMSWLSEANPSLTRASKVASSLVNSQMPRPCVCLKMHGSGSSCWNHAPSSEKGETMVGSS 424
+ LSEA SLT A SQ PC LK GSGS CWN APSSEK ETM+G S
Sbjct: 358 MRNRLSEAMASLTMVLNAALWWAISQKVLPCFNLKRSGSGSLCWNQAPSSEKEETMLGWS 179
Query: 423 TMAANG 406
G
Sbjct: 178 CRLMTG 161
Score = 173 bits (373), Expect = 2e-042
Identities = 85/179 (47%), Positives = 106/179 (59%)
Frame = -1 / -2
Query: 961 PSSNYHVYYYHLSTGFSWRNSLFAILQYLHAVVMVPIMQDRLQQYGVCWWNALKHVASDK 782
P N Y YHLS L+AI Y AV++ PIM + L + +C WNALKHVA +
Sbjct: 716 PPPNPPXYNYHLSRQHLLER*LYAIF*YFDAVIVAPIMHNPL*EDNICLWNALKHVARNV 537
Query: 781 LHVRVSWSLRNDVGKVQHATLDVRERL*DGLGRRTDAPTDVDERAYPLEDLCALLDGNVD 602
LHV + S ND+ +V HA LDVRER L R T A +VD+ AY LED AL DG+V
Sbjct: 536 LHVGATRSPGNDMAEVHHAALDVRERFRYCLCRPTMASGNVDQGAYTLEDAAALPDGDVH 357
Query: 601 DELAVGSQPVVD*GVEGRVIFGQLPDASAVRVLEDARVWELVLEPRAELGEGGDDGWIE 425
+E A+G V+D GVE R++ G P+ AV LE W+LVLEP E EGGDD +E
Sbjct: 356 EEPAIGGHGVIDDGVECRIMVGYFPEGFAVLQLEKVWFWQLVLEPGPEFREGGDDVGLE 180
Score = 36.3 bits (73), Expect(2) = 2e-056
Identities = 15/23 (65%), Positives = 16/23 (69%)
Frame = -2 / -3
Query: 309 GCWVPKTLVVVSTRIRRRRLETL 241
GCW KT VSTRIRRRR + L
Sbjct: 70 GCWTLKTPETVSTRIRRRRQQIL 2
Score = 35.4 bits (71), Expect(2) = 9e-078
Identities = 17/32 (53%), Positives = 18/32 (56%)
Frame = +2 / +3
Query: 293 FGTQQPRGGSDDDSEPVYTLTPVSRLLIGSQS 388
F QQP D E VYTLT VS LL+ S S
Sbjct: 54 FSVQQPSPRDDVQVELVYTLTAVSHLLVSSAS 149
>gb|BF259471.1|BF259471 HVSMEf0019D06f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEf0019D06f, mRNA sequence
Length = 587
Score = 271 bits (586), Expect = 7e-072
Identities = 104/195 (53%), Positives = 148/195 (75%)
Frame = +2 / +1
Query: 500 FKHTHGRGIWELTKDDATFDALVNDGLASDSQLIVDVAIKQSAEVFQGISSLVDVGGGIG 679
FK HG WE+ + +++ +N+ + SDS ++D+ +++ +VF GI+SL+DV GG G
Sbjct: 1 FKKAHGLTFWEMADQNDSYNQSINNAMVSDSNFLMDIIMRECGDVFVGINSLIDVAGGHG 180
Query: 680 TAAQAISKAFPHVKCSVLDLAHVVAKAPTHTDVQFIAGDMFESIPPADAVLLKSVLHDWD 859
AA+AI+KAFP +KC+VLDL HVVA+APT+ V FI+GDMF+ IPPADA+ LK V HDW
Sbjct: 181 GAARAIAKAFPQMKCTVLDLPHVVAEAPTNDHVSFISGDMFKYIPPADALFLKWVFHDWG 360
Query: 860 HDDCVKILKNCKKAIPPREAGGKVIIINMVVGAGPSDMKHKEMQAIFDVYIMFINGMERD 1039
+DCVKILK CK+AIPPR+AGGKVII+NMVVG+GP ++ +E Q D++IMF+ G+ER+
Sbjct: 361 DEDCVKILKKCKEAIPPRDAGGKVIIVNMVVGSGPDEIVTRETQVXCDLFIMFLGGVERE 540
Query: 1040 EQEWSKIFSEAGYSD 1084
E E +F +AG+++
Sbjct: 541 EFEVKNLFMQAGFTE 585
Score = 195 bits (420), Expect = 5e-049
Identities = 98/167 (58%), Positives = 105/167 (62%)
Frame = -2 / -1
Query: 1083 SLYPASEKILLHSCSSRSMPLMNMI*TSNMACISLCFMSDGPAPTTMFIIITFPPASLGG 904
S+ PA S SSRS P NMI S C+SL +S GP PTTMF IITFPPASLGG
Sbjct: 584 SVNPACMNKFFTSNSSRSTPPRNMINRSQXTCVSLVTISSGPDPTTMFTIITFPPASLGG 405
Query: 903 IAFLQFFSIFTQSSWSQSCKTDFNSTASAGGMLSNMSPAINCTSV*VGAFATTWARSSTL 724
IA L FFSI TQSS QS KT F ASAGGM N+SP IN T VGA ATT RS+T+
Sbjct: 404 IASLHFFSILTQSSSPQSWKTHFRXRASAGGMYLNISPEINDTWSLVGASATT*GRSNTV 225
Query: 723 HLTCGNAFEMAWAAVPMPPPTSTSELIPWKTSALCLMATSTMSWLSE 583
H CGNAF +A AA P PP TS SE IP TS LM S LSE
Sbjct: 224 HFICGNAFAIALAAPPWPPATSISEFIPTNTSPHSLMMISMRKLLSE 84
Score = 136 bits (291), Expect = 3e-031
Identities = 60/181 (33%), Positives = 102/181 (56%)
Frame = -1 / -3
Query: 1042 LISFHAIDEHDIDIEYGLHLFVLHVRWPSSNYHVYYYHLSTGFSWRNSLFAILQYLHAVV 863
L+S + ++HD I L ++ WP SN+HVY YH T S R+SL A YL V
Sbjct: 543 LLSLNPSEKHDKQITXNLRFSCNNLIWPRSNHHVYDYHFPTSISGRDSLLAFF*YLDTVF 364
Query: 862 MVPIMQDRLQQYGVCWWNALKHVASDKLHVRVSWSLRNDVGKVQHATLDVRERL*DGLGR 683
+ PIM++ LQ+ + WN L+H+A +K H+ VS S N++ ++QH +RE L + G
Sbjct: 363 ITPIMENPLQEXSIRRWNVLEHIARNKRHMVVSGSFCNNMREIQHCAFHLRECLRNCPGS 184
Query: 682 RTDAPTDVDERAYPLEDLCALLDGNVDDELAVGSQPVVD*GVEGRVIFGQLPDASAVRVL 503
T AP+D+++R Y + + ++ +++ + + +VD* + ++ LP+ AV +
Sbjct: 183 STMAPSDINKRVYTNKYITTFPHDDIHEKVTIRNHRIVD*LIVRIILVSHLPEGKAVSLF 4
Query: 502 E 500
E
Sbjct: 3 E 1
Score = 106 bits (226), Expect = 3e-022
Identities = 51/124 (41%), Positives = 70/124 (56%)
Frame = +1 / +3
Query: 646 KLARRRRWGHRYGGPSHLKGVPARQV*RAGPCPRRCEGSNSHGRAIYRWRHV*EHSTSRR 825
KLA RWG + + +G+PA ++ G C S+ +Y WR+V HST
Sbjct: 147 KLAY*CRWGPWWSCQGNCEGIPANEMHSVGSPSCCCRSSH*RPCVVYFWRYVQVHSTCGC 326
Query: 826 RTVEVGLA*LGP*RLREDTEELQKGYSSKRSRWKGDNNKHGSWSWAI*HEAQRDAGHIRC 1005
EVG *LG *RL +DT+++Q GY S+R W+ DN KHG W WA * +R+AG +
Sbjct: 327 SXPEVGFP*LG**RLCQDTKKMQGGYPSQRCWWESDNRKHGGWIWAR*DCYKRNAGXL*S 506
Query: 1006 LYHV 1017
+YHV
Sbjct: 507 VYHV 518
>emb|X77467.1|HVOMET H.vulgare L. mRNA for flavonoid 7-O-methyltransferase
Length = 1402
Score = 182 bits (391), Expect(3) = 2e-070
Identities = 75/173 (43%), Positives = 111/173 (64%)
Frame = +2 / +1
Query: 500 FKHTHGRGIWELTKDDATFDALVNDGLASDSQLIVDVAIKQSAEVFQGISSLVDVGGGIG 679
F HG ++ + D+ F+ + N + + S+ + +A+++ +VF GI SLVDV GG G
Sbjct: 574 FMLAHGGTLYGIGGRDSEFNTVFNKAMGASSEFVAALAVRECRDVFAGIKSLVDVAGGNG 753
Query: 680 TAAQAISKAFPHVKCSVLDLAHVVAKAPTHTDVQFIAGDMFESIPPADAVLLKSVLHDWD 859
T A+ I++AFP+VKCSVLDL V+ +H V+F+AGDM E +PPA+AVLLK VLH+W
Sbjct: 754 TTARTIAEAFPYVKCSVLDLPQVIQGISSHGTVEFVAGDMMEFVPPAEAVLLKYVLHNWS 933
Query: 860 HDDCVKILKNCKKAIPPREAGGKVIIINMVVGAGPSDMKHKEMQAIFDVYIMF 1018
DCVKIL C++AI E GKVIII+ VVG+ + ++ + ++F
Sbjct: 934 DQDCVKILTRCREAISHGEKAGKVIIIDTVVGSPSQQILESQVTMDLSMMMLF 1092
Score = 98.2 bits (208), Expect(2) = 3e-025
Identities = 48/134 (35%), Positives = 72/134 (53%)
Frame = -1 / -2
Query: 955 SNYHVYYYHLSTGFSWRNSLFAILQYLHAVVMVPIMQDRLQQYGVCWWNALKHVASDKLH 776
SN+ V YH ++ S + L QYLHAV++ P+MQ L++ W+ L HV S+KL+
Sbjct: 1029 SNHRVDDYHFTSFLSVGDGLPTSCQYLHAVLITPVMQHILEKNSFSGWHELHHVTSNKLN 850
Query: 775 VRVSWSLRNDVGKVQHATLDVRERL*DGLGRRTDAPTDVDERAYPLEDLCALLDGNVDDE 596
+ + ++QH LD+RE L DG G ++V+ER YP E + A D E
Sbjct: 849 RTMRRDSLYHLWEIQHGALDIRESLGDGSGGGAVPTSNVNERFYPCEHISAFTDSKCGHE 670
Query: 595 LAVGSQPVVD*GVE 554
LA S +++ VE
Sbjct: 669 LAASSHCLIEHSVE 628
Score = 98.2 bits (208), Expect(2) = 7e-030
Identities = 55/109 (50%), Positives = 61/109 (55%)
Frame = -2 / -3
Query: 954 PTTMFIIITFPPASLGGIAFLQFFSIFTQSSWSQSCKTDFNSTASAGGMLSNMSPAINCT 775
PTT+ +IIT P S +A L +IFTQS Q C T TASAGG S MSPA N T
Sbjct: 1028 PTTVSMIITLPAFSPWEMASLHRVNIFTQS*SLQLCSTYLRRTASAGGTNSIMSPATNST 849
Query: 774 SV*VGAFATTWARSSTLHLTCGNAFEMAWAAVPMPPPTSTSELIPWKTS 628
* T RS+T HLT G A M A VP PP TSTS+ IP TS
Sbjct: 848 VP*EEIPCITCGRSNTEHLT*GKASAMVLAVVPFPPATSTSDFIPANTS 702
Score = 68.4 bits (143), Expect(3) = 2e-070
Identities = 27/58 (46%), Positives = 43/58 (74%)
Frame = +2 / +1
Query: 65 STDQSLLDAQLELWHTTFAFMKSMALKSAIHLRIADAIHLHGGAASLSQILSKVHLHP 238
+++ +L A+ EL+ +F ++KSMAL+S + LRI D +H +GGAASL ++LS V +HP
Sbjct: 124 NSNGQILQAEAELFCHSFGYLKSMALQSVVKLRIPDVLHRYGGAASLPELLSTVPIHP 297
Score = 62.5 bits (130), Expect(3) = 2e-070
Identities = 26/43 (60%), Positives = 32/43 (74%)
Frame = +2 / +1
Query: 1010 IMFINGMERDEQEWSKIFSEAGYSDYRIIPVLGVRSIIEVYP* 1138
+M NG R+EQ W KIF EAG+S Y+I VLG+RS+IEV P*
Sbjct: 1081 MMLFNGKVREEQNWHKIFLEAGFSHYKIHNVLGMRSLIEVQP* 1209
Score = 53.3 bits (110), Expect(2) = 7e-030
Identities = 30/68 (44%), Positives = 37/68 (54%)
Frame = -2 / -3
Query: 1137 YG*TSIIDRTPKTGIIL*SLYPASEKILLHSCSSRSMPLMNMI*TSNMACISLCFMSDGP 958
YG TS+ DR P+T IL* L PAS IL CSSR++PL N+I +M +G
Sbjct: 1208 YGWTSMRDRIPRTL*IL**LNPASRNILCQFCSSRTLPLNNIIMDKSMVT*LSSICCEGD 1029
Query: 957 APTTMFII 934
T II
Sbjct: 1028 PTTVSMII 1005
Score = 37.7 bits (76), Expect(2) = 3e-025
Identities = 16/42 (38%), Positives = 25/42 (59%)
Frame = -1 / -2
Query: 1138 LWIDLDYRPNT*DRYYSVIAISSFGENLAPLLLISFHAIDEH 1013
LW+D + P++*D V+ S F E L P+LL+ + I+ H
Sbjct: 1209 LWLDFNEGPHS*DVVNFVVTKSRFQEYLVPILLLPYFTIE*H 1084
>gb|BU974771.1|BU974771 HB29A24r BC Hordeum vulgare subsp. vulgare cDNA clone HB29A24
5-PRIME, mRNA sequence
Length = 667
Score = 171 bits (367), Expect(3) = 4e-062
Identities = 68/102 (66%), Positives = 85/102 (83%)
Frame = +2 / +3
Query: 773 DVQFIAGDMFESIPPADAVLLKSVLHDWDHDDCVKILKNCKKAIPPREAGGKVIIINMVV 952
+++F+AGDMFESIPPADAVLLK+VLHDW HDDCVKIL+ CK+AIP R AGGKVIII+MV
Sbjct: 213 NLRFVAGDMFESIPPADAVLLKNVLHDWGHDDCVKILQRCKEAIPARSAGGKVIIIDMVR 392
Query: 953 GAGPSDMKHKEMQAIFDVYIMFINGMERDEQEWSKIFSEAGY 1078
G+ D K EM+A+ D++ M NG+ERDE EW +IFS+AG+
Sbjct: 393 GSLLGDKKIAEMEAMQDMFAMCTNGVERDESEWKRIFSDAGF 518
Score = 126 bits (270), Expect(2) = 1e-037
Identities = 61/96 (63%), Positives = 69/96 (71%)
Frame = -2 / -1
Query: 1074 PASEKILLHSCSSRSMPLMNMI*TSNMACISLCFMSDGPAPTTMFIIITFPPASLGGIAF 895
PASEKIL HS SSRS PL+++ S MA IS F+S P T+ +IITFPPA L G+A
Sbjct: 514 PASEKILFHSLSSRSTPLVHIANMSCMASISAIFLSPRRDPLTISMIITFPPALLAGMAS 335
Query: 894 LQFFSIFTQSSWSQSCKTDFNSTASAGGMLSNMSPA 787
LQ SI TQSSW QSCKT + TASAGGM SNMSPA
Sbjct: 334 LQR*SILTQSSWPQSCKTFLSRTASAGGMDSNMSPA 227
Score = 84.0 bits (177), Expect(2) = 4e-022
Identities = 38/108 (35%), Positives = 60/108 (55%)
Frame = -1 / -3
Query: 1087 VIAISSFGENLAPLLLISFHAIDEHDIDIEYGLHLFVLHVRWPSSNYHVYYYHLSTGFSW 908
++A SS G++ PL L+ F+ + H + +G H L + +YH+Y YHL +G
Sbjct: 527 ILAESSIGKDPLPLALVPFNPVGAHREHVLHGFHFGDLLIAEERPSYHIYDYHLPSGAPR 348
Query: 907 RNSLFAILQYLHAVVMVPIMQDRLQQYGVCWWNALKHVASDKLHVRVS 764
R+ A L+YL AVV+ P+MQ+ L+Q + N KHV + V V+
Sbjct: 347 RDGFLATLKYLDAVVVAPVMQNILEQDSIRRRNGFKHVTGHETQVVVA 204
Score = 71.6 bits (150), Expect(3) = 4e-062
Identities = 26/62 (41%), Positives = 42/62 (67%)
Frame = +2 / +3
Query: 575 GLASDSQLIVDVAIKQSAEVFQGISSLVDVGGGIGTAAQAISKAFPHVKCSVLDLAHVVA 754
G+ +DS+L ++V I +F+G++SLVDVG G G + ++KAFP +KC+VLD +
Sbjct: 9 GMTADSELFLEVIIVDKGRIFRGVTSLVDVGAGNGAGTRVVAKAFPRIKCTVLDRPQSLG 188
Query: 755 KA 760
+A
Sbjct: 189 QA 194
Score = 51.0 bits (105), Expect(2) = 1e-037
Identities = 25/55 (45%), Positives = 29/55 (52%)
Frame = -2 / -1
Query: 738 RSSTLHLTCGNAFEMAWAAVPMPPPTSTSELIPWKTSALCLMATSTMSWLSEANP 574
RSST+HL GNA P+P PTST E+ P K L + TS S LS P
Sbjct: 172 RSSTVHLMRGNALATTRVPAPLPAPTSTREVTPRKMRPLSTIMTSRKSSLSAVMP 8
Score = 41.4 bits (84), Expect(2) = 4e-022
Identities = 22/51 (43%), Positives = 26/51 (50%)
Frame = -1 / -3
Query: 736 VQHATLDVRERL*DGLGRRTDAPTDVDERAYPLEDLCALLDGNVDDELAVG 584
VQH LD RERL D A DVDE ED + + + +ELAVG
Sbjct: 170 VQHGALDARERLGDHPRAGAVAGADVDEGGDAAEDAALVNNNDFQEELAVG 18
Score = 35.4 bits (71), Expect(3) = 4e-062
Identities = 13/19 (68%), Positives = 17/19 (89%)
Frame = +2 / +3
Query: 1082 DYRIIPVLGVRSIIEVYP* 1138
DY+I+PVLG S+IE+YP*
Sbjct: 525 DYKIMPVLGPLSVIEIYP* 581
>gb|AV836790.1|AV836790 AV836790 K. Sato unpublished cDNA library: Hordeum vulgare subsp.
vulgare seedling leaves second leaf stage Hordeum
vulgare subsp. vulgare cDNA clone basd3c22, mRNA
sequence
Length = 696
Score = 165 bits (355), Expect(2) = 1e-061
Identities = 67/98 (68%), Positives = 79/98 (80%)
Frame = +2 / -2
Query: 665 GGGIGTAAQAISKAFPHVKCSVLDLAHVVAKAPTHTDVQFIAGDMFESIPPADAVLLKSV 844
GG GTA I+KAFPHVKC+VLDL VVA AP +V F+ GDMFESIPPAD VLLK +
Sbjct: 560 GGAHGTATAIIAKAFPHVKCTVLDLPRVVAGAPALDNVIFVPGDMFESIPPADTVLLKCI 381
Query: 845 LHDWDHDDCVKILKNCKKAIPPREAGGKVIIINMVVGA 958
LHDW +DC+KIL+ CKKAIP R+AGGKVII++MVVG+
Sbjct: 380 LHDWPDEDCIKILRQCKKAIPVRDAGGKVIIMDMVVGS 267
Score = 124 bits (265), Expect(2) = 1e-042
Identities = 59/97 (60%), Positives = 64/97 (65%)
Frame = -2 / +1
Query: 954 PTTMFIIITFPPASLGGIAFLQFFSIFTQSSWSQSCKTDFNSTASAGGMLSNMSPAINCT 775
PTT+ +IITFPPASL G+AFL SI QSS QSCK + T SAGGM SNMSP T
Sbjct: 271 PTTISMIITFPPASLTGMAFLH*RSILMQSSSGQSCKMHLSKTVSAGGMDSNMSPGTKIT 450
Query: 774 SV*VGAFATTWARSSTLHLTCGNAFEMAWAAVPMPPP 664
GA ATT RSST+HLTCGNA M AVP PP
Sbjct: 451 LSRAGAPATTRGRSSTVHLTCGNALAMIAVAVPWAPP 561
Score = 92.3 bits (195), Expect(2) = 1e-061
Identities = 34/53 (64%), Positives = 46/53 (86%)
Frame = +2 / -2
Query: 980 KEMQAIFDVYIMFINGMERDEQEWSKIFSEAGYSDYRIIPVLGVRSIIEVYP* 1138
KE + +FDV++M+I+G++R+E EW KIF EAG+SDY+I PV G+RSIIEVYP*
Sbjct: 239 KEAEVLFDVFMMYIDGIQREEHEWRKIFFEAGFSDYKITPVTGIRSIIEVYP* 81
Score = 79.9 bits (168), Expect(2) = 9e-021
Identities = 35/87 (40%), Positives = 55/87 (63%)
Frame = -1 / +3
Query: 955 SNYHVYYYHLSTGFSWRNSLFAILQYLHAVVMVPIMQDRLQQYGVCWWNALKHVASDKLH 776
+++H++ YHLS+ +R+ A+ QYL A+ + PIMQ+ L+ GV W+ L+HVA D+ +
Sbjct: 270 TDHHIHDYHLSSSVPYRDGFLALTQYLDAIFVWPIMQNALE*NGVRRWDGLEHVAGDEDY 449
Query: 775 VRVSWSLRNDVGKVQHATLDVRERL*D 695
+ S +D +VQH LDV E L D
Sbjct: 450 IIKGRSSGDDAREVQHGALDVWECLGD 530
Score = 70.3 bits (147), Expect(2) = 1e-042
Identities = 33/51 (64%), Positives = 39/51 (76%)
Frame = -2 / +1
Query: 1134 G*TSIIDRTPKTGIIL*SLYPASEKILLHSCSSRSMPLMNMI*TSNMACIS 982
G*TSII+R P TG+IL*SL PAS+KI LHSCSSR +P M ++ TSN S
Sbjct: 85 G*TSIIERIPVTGVIL*SLNPASKKIFLHSCSSRWIPSMYIMKTSNKTSAS 237
Score = 40.9 bits (83), Expect(2) = 9e-021
Identities = 18/35 (51%), Positives = 22/35 (62%)
Frame = -1 / +3
Query: 1087 VIAISSFGENLAPLLLISFHAIDEHDIDIEYGLHL 983
V+A SF ENL PL+L+S +D H DIE L L
Sbjct: 132 VVAKPSFKENLPPLMLLSLDPVDVHHEDIEQNLRL 236
>gb|BF628874.2|BF628874 HVSMEb0009A12f Hordeum vulgare seedling shoot EST library HVcDNA0002
(Dehydration stress) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEb0009A12f, mRNA sequence
Length = 875
Score = 236 bits (509), Expect = 3e-061
Identities = 90/130 (69%), Positives = 110/130 (84%)
Frame = +2 / +2
Query: 749 VAKAPTHTDVQFIAGDMFESIPPADAVLLKSVLHDWDHDDCVKILKNCKKAIPPREAGGK 928
+A AP+ TDVQ+IAGDMFESIP AD V LK ++HDW DDC+KILKNC KAI P++AGGK
Sbjct: 5 IAGAPSGTDVQYIAGDMFESIPQADVVFLKWIMHDWSDDDCIKILKNCNKAIAPKDAGGK 184
Query: 929 VIIINMVVGAGPSDMKHKEMQAIFDVYIMFINGMERDEQEWSKIFSEAGYSDYRIIPVLG 1108
VII++MVVG GP D+KHKE Q +FD+YIM +NG+ERDEQEW KI AG+SD++I P+LG
Sbjct: 185 VIIVDMVVGGGPQDLKHKETQVLFDLYIMLLNGIERDEQEWKKIIMAAGFSDFKITPILG 364
Query: 1109 VRSIIEVYP* 1138
VRSIIE+YP*
Sbjct: 365 VRSIIELYP* 394
Score = 186 bits (401), Expect = 2e-046
Identities = 84/127 (66%), Positives = 95/127 (74%)
Frame = -2 / -3
Query: 1137 YG*TSIIDRTPKTGIIL*SLYPASEKILLHSCSSRSMPLMNMI*TSNMACISLCFMSDGP 958
+G*+S+IDRTP+ G+IL SL PA+ I HSCSSRSMPL +M+* SN C+SLCF S GP
Sbjct: 393 HG*SSMIDRTPRIGVILKSLNPAAMIIFFHSCSSRSMPLRSMM*RSNKTCVSLCFRSCGP 214
Query: 957 APTTMFIIITFPPASLGGIAFLQFFSIFTQSSWSQSCKTDFNSTASAGGMLSNMSPAINC 778
PTTM IITFPPAS G IA LQFFSI QSS QSC F T SA GMLSNMSPA+ C
Sbjct: 213 PPTTMSTIITFPPASFGAIALLQFFSILMQSSSLQSCIIHFRKTTSACGMLSNMSPAMYC 34
Query: 777 TSV*VGA 757
TSV +GA
Sbjct: 33 TSVPLGA 13
Score = 123 bits (263), Expect = 2e-027
Identities = 55/103 (53%), Positives = 67/103 (65%)
Frame = -1 / -2
Query: 1057 LAPLLLISFHAIDEHDIDIEYGLHLFVLHVRWPSSNYHVYYYHLSTGFSWRNSLFAILQY 878
L PLLLISF AI+EHD+ IE L LFVL V S+N+HVY YHLS W +S AI Y
Sbjct: 313 LLPLLLISFDAIEEHDVKIEQDLCLFVLQVLRASTNHHVYNYHLSASIFWSDSFIAIF*Y 134
Query: 877 LHAVVMVPIMQDRLQQYGVCWWNALKHVASDKLHVRVSWSLRN 749
AV++ PIM + L + +C WNALKHVA + LHV + S N
Sbjct: 133 FDAVIVAPIMHNPL*EDNICLWNALKHVARNVLHVGATRSPGN 5
Score = 113 bits (241), Expect = 3e-024
Identities = 60/133 (45%), Positives = 76/133 (57%)
Frame = +1 / +1
Query: 745 RRCEGSNSHGRAIYRWRHV*EHSTSRRRTVEVGLA*LGP*RLREDTEELQKGYSSKRSRW 924
+ C GS H RA++ RHV*EHST R +V A*L L ++T++LQ Y SKR
Sbjct: 1 QHCRGS*WHRRAVHCGRHV*EHSTGRCCLPKVDYA*LERR*LHQNTKKLQ*SYRSKRCWR 180
Query: 925 KGDNNKHGSWSWAI*HEAQRDAGHIRCLYHVHQWHGTR*AGVEQDFLRSWI*RLQNNTGL 1104
KGDN +HG W EAQRD +R L+H QWH TR*AGVE+D I LQN+
Sbjct: 181 KGDNCRHGGWWRPARPEAQRDTSLVRSLHHAPQWHRTR*AGVEEDNHGGRIQ*LQNHPDS 360
Query: 1105 RCSVYNRGLSITI 1143
C + + L + I
Sbjct: 361 GCPINH*ALPVNI 399
Score = 103 bits (220), Expect = 2e-021
Identities = 59/110 (53%), Positives = 70/110 (63%)
Frame = +3 / +3
Query: 747 SLRRLQLTRTCNLSLATCLRAFHQQTPYC*SRSCMIGTMTTA*RY*RIAKRLFLQEKPVE 926
+L L + TC+ ATCLRAFH+Q *S CMIG TA +Y*+IA +L LQ+ E
Sbjct: 3 ALPGLLVAPTCSTLRATCLRAFHRQMLSS*SGLCMIGATMTASKY*KIAIKLSLQKMLAE 182
Query: 927 R****TW*LELGHLT*STKRCRPYSMSISCSSMAWNEMSRSGARFSPKLD 1076
R** *TW L T*STKR + S+ SCSSMA NEMSRSG R S + D
Sbjct: 183 R**L*TWWLVEARKT*STKRHKSCSIFTSCSSMASNEMSRSGRR*SWRQD 332
>gb|AV913364.1|AV913364 AV913364 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags21m21 5', mRNA sequence
Length = 665
Score = 232 bits (500), Expect = 5e-060
Identities = 87/148 (58%), Positives = 119/148 (80%)
Frame = +2 / +3
Query: 413 AAMVLDPTIVSPFSELGAWFQHELPDPCIFKHTHGRGIWELTKDDATFDALVNDGLASDS 592
+A L+P +++PF +G WF++ PDP +F+ THG G+W++ DATFDAL+NDG+ SDS
Sbjct: 3 SARGLNPIMLTPFLGIGDWFKYGQPDPSLFEQTHGEGLWKMAHRDATFDALINDGMVSDS 182
Query: 593 QLIVDVAIKQSAEVFQGISSLVDVGGGIGTAAQAISKAFPHVKCSVLDLAHVVAKAPTHT 772
+ I+D+A+K+ EVFQGI+SLVDVGGG+G A+QAISKAFPH++C+V+DL HV+A APT T
Sbjct: 183 RFIMDIAVKECGEVFQGITSLVDVGGGLGAASQAISKAFPHLECTVMDLGHVIANAPTGT 362
Query: 773 DVQFIAGDMFESIPPADAVLLKSVLHDW 856
DV+F+AGDMFES+P A+AV LK W
Sbjct: 363 DVKFVAGDMFESVPAANAVFLKVRTSSW 446
Score = 166 bits (358), Expect = 2e-040
Identities = 74/136 (54%), Positives = 93/136 (68%)
Frame = -1 / -1
Query: 832 QYGVCWWNALKHVASDKLHVRVSWSLRNDVGKVQHATLDVRERL*DGLGRRTDAPTDVDE 653
++ +C WNAL+HVA D+LHV SWS+ +DV ++ L++RERL D L R +A DV +
Sbjct: 422 EHSICRWNALEHVAGDELHVSTSWSIGDDVTEIHDGALEMRERLGDCLRCRAEATADVYQ 243
Query: 652 RAYPLEDLCALLDGNVDDELAVGSQPVVD*GVEGRVIFGQLPDASAVRVLEDARVWELVL 473
R YPLEDL ALLDG+V DE AV PV+D VEG V G LP A AVR+LE+ARVW VL
Sbjct: 242 RGYPLEDLAALLDGDVHDEAAVRDHPVIDQRVEGGVAVGHLPQALAVRLLEEARVWLPVL 63
Query: 472 EPRAELGEGGDDGWIE 425
EP A+ E G+ IE
Sbjct: 62 EPVADPEERGEHDGIE 15
Score = 160 bits (343), Expect = 2e-038
Identities = 78/141 (55%), Positives = 86/141 (60%)
Frame = -2 / -2
Query: 837 FNSTASAGGMLSNMSPAINCTSV*VGAFATTWARSSTLHLTCGNAFEMAWAAVPMPPPTS 658
F +TA A G LSNMSPA N TSV VGA A T RS T+H CGNA E+A A P PPPTS
Sbjct: 427 FRNTAFAAGTLSNMSPATNFTSVPVGALAMT*PRSMTVHSRCGNALEIA*DAAPRPPPTS 248
Query: 657 TSELIPWKTSALCLMATSTMSWLSEANPSLTRASKVASSLVNSQMPRPCVCLKMHGSGSS 478
T+E+IPWKTS L A S M LSE PSL ASKVAS P PCVC K GSG
Sbjct: 247 TNEVIPWKTSPHSLTAMSMMKRLSETIPSLISASKVASRWAIFHRPSPCVCSKRLGSGCP 68
Query: 477 CWNHAPSSEKGETMVGSSTMA 415
N +P G +M+G S A
Sbjct: 67 YLNQSPIPRNGVSMMGLSPRA 5
>gb|AV918663.1|AV918663 AV918663 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags21m21 3', mRNA sequence
Length = 612
Score = 231 bits (499), Expect = 7e-060
Identities = 86/144 (59%), Positives = 117/144 (81%)
Frame = +2 / -3
Query: 425 LDPTIVSPFSELGAWFQHELPDPCIFKHTHGRGIWELTKDDATFDALVNDGLASDSQLIV 604
L+P +++PF +G WF++ PDP +F+ THG G+W++ DATFDAL+NDG+ SDS+ I+
Sbjct: 610 LNPIMLTPFLGIGDWFKYGQPDPSLFEQTHGEGLWKMAHRDATFDALINDGMVSDSRFIM 431
Query: 605 DVAIKQSAEVFQGISSLVDVGGGIGTAAQAISKAFPHVKCSVLDLAHVVAKAPTHTDVQF 784
D+A+K+ EVFQGI+SLVDVGGG+G A+QAISKAFPH++C+V+DL HV+A APT TDV+F
Sbjct: 430 DIAVKECGEVFQGITSLVDVGGGLGAASQAISKAFPHLECTVMDLGHVIANAPTGTDVKF 251
Query: 785 IAGDMFESIPPADAVLLKSVLHDW 856
+AGDMFES+P A+AV LK W
Sbjct: 250 VAGDMFESVPAANAVFLKVRTSSW 179
Score = 166 bits (358), Expect = 2e-040
Identities = 74/136 (54%), Positives = 93/136 (68%)
Frame = -1 / +2
Query: 832 QYGVCWWNALKHVASDKLHVRVSWSLRNDVGKVQHATLDVRERL*DGLGRRTDAPTDVDE 653
++ +C WNAL+HVA D+LHV SWS+ +DV ++ L++RERL D L R +A DV +
Sbjct: 203 EHSICRWNALEHVAGDELHVSTSWSIGDDVTEIHDGALEMRERLGDCLRCRAEATADVYQ 382
Query: 652 RAYPLEDLCALLDGNVDDELAVGSQPVVD*GVEGRVIFGQLPDASAVRVLEDARVWELVL 473
R YPLEDL ALLDG+V DE AV PV+D VEG V G LP A AVR+LE+ARVW VL
Sbjct: 383 RGYPLEDLAALLDGDVHDEAAVRDHPVIDQRVEGGVAVGHLPQALAVRLLEEARVWLPVL 562
Query: 472 EPRAELGEGGDDGWIE 425
EP A+ E G+ IE
Sbjct: 563 EPVADPEERGEHDGIE 610
Score = 159 bits (341), Expect = 4e-038
Identities = 77/138 (55%), Positives = 85/138 (61%)
Frame = -2 / +3
Query: 837 FNSTASAGGMLSNMSPAINCTSV*VGAFATTWARSSTLHLTCGNAFEMAWAAVPMPPPTS 658
F +TA A G LSNMSPA N TSV VGA A T RS T+H CGNA E+A A P PPPTS
Sbjct: 198 FRNTAFAAGTLSNMSPATNFTSVPVGALAMT*PRSMTVHSRCGNALEIA*DAAPRPPPTS 377
Query: 657 TSELIPWKTSALCLMATSTMSWLSEANPSLTRASKVASSLVNSQMPRPCVCLKMHGSGSS 478
T+E+IPWKTS L A S M LSE PSL ASKVAS P PCVC K GSG
Sbjct: 378 TNEVIPWKTSPHSLTAMSMMKRLSETIPSLISASKVASRWAIFHRPSPCVCSKRLGSGCP 557
Query: 477 CWNHAPSSEKGETMVGSS 424
N +P G +M+G S
Sbjct: 558 YLNQSPIPRNGVSMMGLS 611
>gb|BM817329.1|BM817329 HC105E06_T3.ab1 HC Hordeum vulgare subsp. vulgare cDNA clone
HC105E06_T3.ab1 similar to Hexaprenyldihydroxybenzoate
methyltransferase,(S)-scoulerine 9-O-methyltransferase,
mRNA sequence
Length = 885
Score = 180 bits (387), Expect(3) = 4e-059
Identities = 72/104 (69%), Positives = 85/104 (81%)
Frame = +2 / +3
Query: 647 SSLVDVGGGIGTAAQAISKAFPHVKCSVLDLAHVVAKAPTHTDVQFIAGDMFESIPPADA 826
SSL+DVGG GTA I+KAFPHVKC+VLDL VVA AP H +V F+ GDMFE IPPAD
Sbjct: 291 SSLIDVGGAHGTATAIIAKAFPHVKCTVLDLPRVVAGAPAHDNVIFVPGDMFEYIPPADT 470
Query: 827 VLLKSVLHDWDHDDCVKILKNCKKAIPPREAGGKVIIINMVVGA 958
VLLK +LHDW DDC+K+L+ CKKAIP R+AGGKVII++MVVG+
Sbjct: 471 VLLKWILHDWPDDDCIKVLRQCKKAIPARDAGGKVIIMDMVVGS 602
Score = 133 bits (285), Expect(3) = 2e-039
Identities = 63/103 (61%), Positives = 68/103 (66%)
Frame = -2 / -3
Query: 954 PTTMFIIITFPPASLGGIAFLQFFSIFTQSSWSQSCKTDFNSTASAGGMLSNMSPAINCT 775
PTT+ +IITFPPASL G+AFL S QSS QSCK + T SAGGM SNMSP T
Sbjct: 598 PTTISMIITFPPASLAGMAFLH*RSTLMQSSSGQSCKIHLSRTVSAGGMYSNMSPGTKIT 419
Query: 774 SV*VGAFATTWARSSTLHLTCGNAFEMAWAAVPMPPPTSTSEL 646
GA ATT RSST+HLTCGNA M AVP PPTS SEL
Sbjct: 418 LSWAGAPATTRGRSSTVHLTCGNALAMIAVAVPWAPPTSISEL 290
Score = 90.4 bits (191), Expect(2) = 1e-022
Identities = 41/101 (40%), Positives = 61/101 (60%)
Frame = -1 / -2
Query: 955 SNYHVYYYHLSTGFSWRNSLFAILQYLHAVVMVPIMQDRLQQYGVCWWNALKHVASDKLH 776
SN+H++ YHL + R+ A+ QYL A+V+ PI+Q+ L+ GVC W+ LKHVA ++ +
Sbjct: 599 SNHHIHDYHLPSRVPCRDGFLALTQYLDAIVVWPIVQNPLE*NGVCRWDVLKHVARNEDY 420
Query: 775 VRVSWSLRNDVGKVQHATLDVRERL*DGLGRRTDAPTDVDE 653
+ + S +D +VQH LDV E L D TDVD+
Sbjct: 419 IIMGRSSGDDAREVQHGALDVWECLGDDRSSGAVGATDVDQ 297
Score = 62.0 bits (129), Expect(3) = 4e-059
Identities = 21/39 (53%), Positives = 32/39 (82%)
Frame = +2 / +3
Query: 980 KEMQAIFDVYIMFINGMERDEQEWSKIFSEAGYSDYRII 1096
KE + FDV++M+I+G++R+E EW KIF AG+SDY+I+
Sbjct: 630 KEAEVXFDVFMMYIDGIQREEHEWRKIFLXAGFSDYKIL 746
Score = 52.4 bits (108), Expect(4) = 2e-025
Identities = 22/55 (40%), Positives = 31/55 (56%)
Frame = +1 / +2
Query: 790 WRHV*EHSTSRRRTVEVGLA*LGP*RLREDTEELQKGYSSKRSRWKGDNNKHGSW 954
WRHV* H T R R+ +V A L RL + T +Q+ + K +GDN+ +G W
Sbjct: 434 WRHV*VHPTGRHRSTQVDFARLARRRLHQGTASVQESHPCKGRGREGDNHGYGGW 598
Score = 47.3 bits (97), Expect(4) = 2e-025
Identities = 20/36 (55%), Positives = 26/36 (72%)
Frame = +1 / +2
Query: 991 GHIRCLYHVHQWHGTR*AGVEQDFLRSWI*RLQNNT 1098
G +RCL+ VH+ R A VE+DFL SW+*RLQ+ T
Sbjct: 641 GXVRCLHDVHRRDPARGA*VEEDFLXSWV*RLQDFT 748
Score = 46.0 bits (94), Expect(3) = 2e-039
Identities = 22/37 (59%), Positives = 26/37 (70%)
Frame = -2 / -3
Query: 1092 IL*SLYPASEKILLHSCSSRSMPLMNMI*TSNMACIS 982
IL*SL PA +KI LHSCSSR +P M ++ TSN S
Sbjct: 742 IL*SLNPAXKKIFLHSCSSRWIPSMYIMKTSNXTSAS 632
Score = 45.5 bits (93), Expect(4) = 2e-025
Identities = 24/67 (35%), Positives = 34/67 (50%)
Frame = +2 / +3
Query: 497 IFKHTHGRGIWELTKDDATFDALVNDGLASDSQLIVDVAIKQSAEVFQGISSLVDVGGGI 676
+F+ HG WE+ DA D L N +A+DS L + + +K+ VF I S + GG
Sbjct: 138 LFEVAHGCTRWEMIAKDAGDDRLFNASMAADSCLTMGILLKECNNVFGSIGSSLIDVGGA 317
Query: 677 GTAAQAI 697
A AI
Sbjct: 318 HGTATAI 338
Score = 36.8 bits (74), Expect(2) = 1e-022
Identities = 17/35 (48%), Positives = 21/35 (60%)
Frame = -1 / -2
Query: 1087 VIAISSFGENLAPLLLISFHAIDEHDIDIEYGLHL 983
V+A S ENL PL+L+S +D H DIE L L
Sbjct: 737 VVAKPSX*ENLPPLMLLSLDPVDVHHEDIEXNLRL 633
Score = 25.8 bits (50), Expect(3) = 4e-059
Identities = 10/11 (90%), Positives = 11/11 (100%)
Frame = +2 / +2
Query: 1106 GVRSIIEVYP* 1138
G+RSIIEVYP*
Sbjct: 758 GIRSIIEVYP* 790
Score = 25.8 bits (50), Expect(4) = 2e-025
Identities = 9/16 (56%), Positives = 10/16 (62%)
Frame = +3 / +1
Query: 690 KPSQRRSRTSSVACWT 737
+ S R S TSS CWT
Sbjct: 334 RSSPRHSHTSSAPCWT 381
Score = 22.1 bits (42), Expect(3) = 2e-039
Identities = 9/14 (64%), Positives = 11/14 (78%)
Frame = -2 / -1
Query: 1134 G*TSIIDRTPKTGI 1093
G*TSII+R P G+
Sbjct: 786 G*TSIIERIPGHGV 745
>gb|BJ449787.1|BJ449787 BJ449787 K. Sato unpublished cDNA library, cv. Akashinriki vegetative
stage leaves Hordeum vulgare subsp. vulgare cDNA clone
baak26l07 5', mRNA sequence
Length = 609
Score = 170 bits (366), Expect(3) = 1e-058
Identities = 67/103 (65%), Positives = 86/103 (83%)
Frame = +2 / +1
Query: 776 VQFIAGDMFESIPPADAVLLKSVLHDWDHDDCVKILKNCKKAIPPREAGGKVIIINMVVG 955
+ F+AGDMF+SIP ADAVLLK++LHDW HDDCVKILK CK+AIP R AGGKVIII+MV G
Sbjct: 139 LSFVAGDMFQSIPSADAVLLKNILHDWGHDDCVKILKCCKEAIPARNAGGKVIIIDMVRG 318
Query: 956 AGPSDMKHKEMQAIFDVYIMFINGMERDEQEWSKIFSEAGYSD 1084
+ D K EM+AI ++++M+I G+ER+E EW +IFS+AG+SD
Sbjct: 319 SANGDRKINEMEAIQNLFMMYITGIERNEIEWKRIFSDAGFSD 447
Score = 118 bits (252), Expect(2) = 4e-033
Identities = 58/99 (58%), Positives = 67/99 (67%)
Frame = -2 / -2
Query: 1083 SLYPASEKILLHSCSSRSMPLMNMI*TSNMACISLCFMSDGPAPTTMFIIITFPPASLGG 904
SL PASE IL HS S RS+P+M ++ MA ISL F+S P T+ I+ITFPPA L G
Sbjct: 446 SLKPASENILFHSISFRSIPVMYIMNKFCMASISLIFLSPFADPLTISIMITFPPAFLAG 267
Query: 903 IAFLQFFSIFTQSSWSQSCKTDFNSTASAGGMLSNMSPA 787
+A LQ SI TQSSW QSCK + TASA GM NMSPA
Sbjct: 266 MASLQHLSILTQSSWPQSCKMFLSKTASADGMD*NMSPA 150
Score = 59.7 bits (124), Expect(3) = 1e-058
Identities = 23/34 (67%), Positives = 27/34 (79%)
Frame = +2 / +1
Query: 650 SLVDVGGGIGTAAQAISKAFPHVKCSVLDLAHVV 751
SLVDVGGG G Q I+KAFP +KC+V+DL HVV
Sbjct: 4 SLVDVGGGNGAGTQVIAKAFPRIKCTVMDLPHVV 105
Score = 44.1 bits (90), Expect(2) = 4e-033
Identities = 18/34 (52%), Positives = 22/34 (64%)
Frame = -2 / -2
Query: 750 TTWARSSTLHLTCGNAFEMAWAAVPMPPPTSTSE 649
TT RS T+HL GNA + P+PPPTSTS+
Sbjct: 104 TT*GRSITVHLMRGNALAITCVPAPLPPPTSTSD 3
Score = 35.9 bits (72), Expect(3) = 1e-058
Identities = 13/19 (68%), Positives = 17/19 (89%)
Frame = +2 / +1
Query: 1082 DYRIIPVLGVRSIIEVYP* 1138
DY+I+PVLG S+IE+YP*
Sbjct: 448 DYKILPVLGPYSVIEIYP* 504
>gb|CB879734.1|CB879734 HP03H10w HP Hordeum vulgare subsp. vulgare cDNA clone HP03H10
3-PRIME, mRNA sequence
Length = 628
Score = 171 bits (367), Expect(3) = 7e-058
Identities = 68/102 (66%), Positives = 85/102 (83%)
Frame = +2 / -1
Query: 773 DVQFIAGDMFESIPPADAVLLKSVLHDWDHDDCVKILKNCKKAIPPREAGGKVIIINMVV 952
+++F+AGDMFESIPPADAVLLK+VLHDW HDDCVKIL+ CK+AIP R AGGKVIII+MV
Sbjct: 478 NLRFVAGDMFESIPPADAVLLKNVLHDWGHDDCVKILQRCKEAIPARSAGGKVIIIDMVR 299
Query: 953 GAGPSDMKHKEMQAIFDVYIMFINGMERDEQEWSKIFSEAGY 1078
G+ D K EM+A+ D++ M NG+ERDE EW +IFS+AG+
Sbjct: 298 GSLLGDKKIAEMEAMQDMFAMCTNGVERDESEWKRIFSDAGF 173
Score = 126 bits (270), Expect(2) = 6e-035
Identities = 61/96 (63%), Positives = 69/96 (71%)
Frame = -2 / +3
Query: 1074 PASEKILLHSCSSRSMPLMNMI*TSNMACISLCFMSDGPAPTTMFIIITFPPASLGGIAF 895
PASEKIL HS SSRS PL+++ S MA IS F+S P T+ +IITFPPA L G+A
Sbjct: 177 PASEKILFHSLSSRSTPLVHIANMSCMASISAIFLSPRRDPLTISMIITFPPALLAGMAS 356
Query: 894 LQFFSIFTQSSWSQSCKTDFNSTASAGGMLSNMSPA 787
LQ SI TQSSW QSCKT + TASAGGM SNMSPA
Sbjct: 357 LQR*SILTQSSWPQSCKTFLSRTASAGGMDSNMSPA 464
Score = 57.4 bits (119), Expect(3) = 7e-058
Identities = 21/44 (47%), Positives = 31/44 (70%)
Frame = +2 / -1
Query: 629 EVFQGISSLVDVGGGIGTAAQAISKAFPHVKCSVLDLAHVVAKA 760
E+F+G++SLVDVG G G + +KAFP +KC+VLD + +A
Sbjct: 628 EIFRGVTSLVDVGAGNGAGTRVFAKAFPRIKCTVLDRPQSLGQA 497
Score = 41.8 bits (85), Expect(2) = 6e-035
Identities = 18/35 (51%), Positives = 21/35 (60%)
Frame = -2 / +3
Query: 738 RSSTLHLTCGNAFEMAWAAVPMPPPTSTSELIPWK 634
RSST+HL GNA P+P PTST E+ P K
Sbjct: 519 RSSTVHLMRGNALANTRVPAPLPAPTSTREVTPRK 623
Score = 35.4 bits (71), Expect(3) = 7e-058
Identities = 13/19 (68%), Positives = 17/19 (89%)
Frame = +2 / -1
Query: 1082 DYRIIPVLGVRSIIEVYP* 1138
DY+I+PVLG S+IE+YP*
Sbjct: 166 DYKIMPVLGPLSVIEIYP* 110
>gb|CB877071.1|CB877071 HP03H10T HP Hordeum vulgare subsp. vulgare cDNA clone HP03H10
5-PRIME, mRNA sequence
Length = 587
Score = 171 bits (367), Expect(3) = 1e-057
Identities = 68/102 (66%), Positives = 85/102 (83%)
Frame = +2 / +2
Query: 773 DVQFIAGDMFESIPPADAVLLKSVLHDWDHDDCVKILKNCKKAIPPREAGGKVIIINMVV 952
+++F+AGDMFESIPPADAVLLK+VLHDW HDDCVKIL+ CK+AIP R AGGKVIII+MV
Sbjct: 158 NLRFVAGDMFESIPPADAVLLKNVLHDWGHDDCVKILQRCKEAIPARSAGGKVIIIDMVR 337
Query: 953 GAGPSDMKHKEMQAIFDVYIMFINGMERDEQEWSKIFSEAGY 1078
G+ D K EM+A+ D++ M NG+ERDE EW +IFS+AG+
Sbjct: 338 GSLLGDKKIAEMEAMQDMFAMCTNGVERDESEWKRIFSDAGF 463
Score = 126 bits (270), Expect(2) = 5e-035
Identities = 61/96 (63%), Positives = 69/96 (71%)
Frame = -2 / -3
Query: 1074 PASEKILLHSCSSRSMPLMNMI*TSNMACISLCFMSDGPAPTTMFIIITFPPASLGGIAF 895
PASEKIL HS SSRS PL+++ S MA IS F+S P T+ +IITFPPA L G+A
Sbjct: 459 PASEKILFHSLSSRSTPLVHIANMSCMASISAIFLSPRRDPLTISMIITFPPALLAGMAS 280
Query: 894 LQFFSIFTQSSWSQSCKTDFNSTASAGGMLSNMSPA 787
LQ SI TQSSW QSCKT + TASAGGM SNMSPA
Sbjct: 279 LQR*SILTQSSWPQSCKTFLSRTASAGGMDSNMSPA 172
Score = 56.5 bits (117), Expect(3) = 1e-057
Identities = 20/43 (46%), Positives = 31/43 (72%)
Frame = +2 / +2
Query: 632 VFQGISSLVDVGGGIGTAAQAISKAFPHVKCSVLDLAHVVAKA 760
+F+G++SLVDVG G G + ++KAFP +KC+VLD + +A
Sbjct: 11 IFRGVTSLVDVGAGNGAGTRVVAKAFPRIKCTVLDRPQSLGQA 139
Score = 42.3 bits (86), Expect(2) = 5e-035
Identities = 18/35 (51%), Positives = 21/35 (60%)
Frame = -2 / -3
Query: 738 RSSTLHLTCGNAFEMAWAAVPMPPPTSTSELIPWK 634
RSST+HL GNA P+P PTST E+ P K
Sbjct: 117 RSSTVHLMRGNALATTRVPAPLPAPTSTREVTPRK 13
Score = 35.4 bits (71), Expect(3) = 1e-057
Identities = 13/19 (68%), Positives = 17/19 (89%)
Frame = +2 / +2
Query: 1082 DYRIIPVLGVRSIIEVYP* 1138
DY+I+PVLG S+IE+YP*
Sbjct: 470 DYKIMPVLGPLSVIEIYP* 526
>gb|BJ462654.1|BJ462654 BJ462654 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags29l10 5', mRNA sequence
Length = 720
Score = 181 bits (389), Expect(2) = 6e-057
Identities = 70/137 (51%), Positives = 97/137 (70%)
Frame = +2 / +2
Query: 545 DATFDALVNDGLASDSQLIVDVAIKQSAEVFQGISSLVDVGGGIGTAAQAISKAFPHVKC 724
D D++ N GLA+ L + +++ ++F+G+ SL D GG GT A+A+ KA+PH+KC
Sbjct: 110 DQELDSVCNQGLAAHDNLGIATILRECGDIFKGLDSLTDCCGGDGTTARALVKAYPHIKC 289
Query: 725 SVLDLAHVVAKAPTHTDVQFIAGDMFESIPPADAVLLKSVLHDWDHDDCVKILKNCKKAI 904
+VLDL VV KAP + ++AGD+F ++PP+ V+LK VLH W +DCVKIL C+KAI
Sbjct: 290 TVLDLPKVVEKAPADGVINYVAGDLFHTVPPSQVVMLKLVLHFWSDEDCVKILAQCRKAI 469
Query: 905 PPREAGGKVIIINMVVG 955
PPRE GGKVIII +VVG
Sbjct: 470 PPREEGGKVIIIEIVVG 520
Score = 116 bits (248), Expect(2) = 2e-028
Identities = 55/109 (50%), Positives = 67/109 (61%)
Frame = -2 / -1
Query: 954 PTTMFIIITFPPASLGGIAFLQFFSIFTQSSWSQSCKTDFNSTASAGGMLSNMSPAINCT 775
PTT+ +IITFPP+S GG+AFL + IFTQSS Q C T + T GG + N SPA
Sbjct: 519 PTTISMIITFPPSSRGGMAFLHWARIFTQSSSLQKCSTSLSITT*DGGTVWNRSPAT*LM 340
Query: 774 SV*VGAFATTWARSSTLHLTCGNAFEMAWAAVPMPPPTSTSELIPWKTS 628
+ GAF+TT+ RS+T+HL CG A A A VP PP S E P K S
Sbjct: 339 TPSAGAFSTTFGRSNTVHLMCG*ALTRALAVVPSPPQQSVRESSPLKMS 193
Score = 61.1 bits (127), Expect(2) = 6e-057
Identities = 22/41 (53%), Positives = 31/41 (75%)
Frame = +2 / +2
Query: 1025 GMERDEQEWSKIFSEAGYSDYRIIPVLGVRSIIEVYP*PFV 1147
G +RDE W ++F +AG++DY+I+ LG RS+IEVYP* V
Sbjct: 590 GGQRDENHWCELFKKAGFTDYKIVKKLGARSVIEVYP*DIV 712
Score = 30.4 bits (60), Expect(2) = 2e-028
Identities = 15/26 (57%), Positives = 17/26 (65%)
Frame = -2 / -1
Query: 1146 TNGYG*TSIIDRTPKTGIIL*SLYPA 1069
T YG*TS+ DR P IL*S+ PA
Sbjct: 711 TISYG*TSMTDRAPNFFTIL*SVNPA 634
>gb|BI957606.1|BI957606 HVSMEn0010F15f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0010F15f, mRNA sequence
Length = 648
Score = 127 bits (271), Expect(3) = 8e-056
Identities = 49/96 (51%), Positives = 68/96 (70%)
Frame = +2 / +3
Query: 386 SSQLAQTPLAAMVLDPTIVSPFSELGAWFQHELPDPCIFKHTHGRGIWELTKDDATFDAL 565
S+ + P+ + L P IVS FSELGAWFQH+LP+P +FK HG+ WE+ +A F+ +
Sbjct: 360 SASVNIVPVINLQLQPNIVSSFSELGAWFQHKLPEPDLFKLKHGKTFWEIAHHNAAFNTI 539
Query: 566 VNDGLASDSQLIVDVAIKQSAEVFQGISSLVDVGGG 673
VND +ASDS+ ++D+AI++ VF GI SLVDV GG
Sbjct: 540 VNDAMASDSRFLMDIAIRECGSVFXGIGSLVDVAGG 647
Score = 107 bits (228), Expect(2) = 2e-043
Identities = 48/81 (59%), Positives = 54/81 (66%)
Frame = -2 / -3
Query: 309 GCWVPKTLVVVSTRIRRRRLETLDGWRWTLLSIWDRLAAPPWRWMASAIRRCIADLSAMD 130
GCW KT VSTRIRRRR + LDGW IW+R+AAPPW WMASA+ R D SA+D
Sbjct: 289 GCWTLKTPETVSTRIRRRRQQILDGWSVATAPIWERVAAPPWWWMASAMPRSKQDFSAID 110
Query: 129 FMNAKVVCQSSSCASSKLWSV 67
K +CQSSS ASSK SV
Sbjct: 109 LT*PKEMCQSSS*ASSKP*SV 47
Score = 94.5 bits (200), Expect(3) = 8e-056
Identities = 40/57 (70%), Positives = 46/57 (80%)
Frame = +2 / +3
Query: 68 TDQSLLDAQLELWHTTFAFMKSMALKSAIHLRIADAIHLHGGAASLSQILSKVHLHP 238
TDQ LLDAQLELWH +F ++KSMALKS + L IADAIH HGGAA+LSQI + LHP
Sbjct: 48 TDQGLLDAQLELWHISFGYVKSMALKSCLDLGIADAIHHHGGAATLSQIGAVATLHP 218
Score = 89.5 bits (189), Expect(2) = 2e-043
Identities = 47/89 (52%), Positives = 49/89 (55%)
Frame = -2 / -3
Query: 672 PPPTSTSELIPWKTSALCLMATSTMSWLSEANPSLTRASKVASSLVNSQMPRPCVCLKMH 493
PP TST E IP KT LMA S + LSEA SLT A SQ PC LK
Sbjct: 646 PPATSTREPIPXKTLPHSLMAMSMRNRLSEAMASLTMVLNAALWWAISQKVLPCFNLKRS 467
Query: 492 GSGSSCWNHAPSSEKGETMVGSSTMAANG 406
GSGS CWN APSSEK ETM+G S G
Sbjct: 466 GSGSLCWNQAPSSEKEETMLGWSCRLMTG 380
Score = 87.2 bits (184), Expect(2) = 1e-031
Identities = 40/83 (48%), Positives = 51/83 (61%)
Frame = -1 / -2
Query: 673 APTDVDERAYPLEDLCALLDGNVDDELAVGSQPVVD*GVEGRVIFGQLPDASAVRVLEDA 494
A +VD+ AY ED AL DG+V +E A+G V+D GVE R++ G P+ AV LE
Sbjct: 647 ASGNVDQGAYTXEDAAALPDGDVHEEPAIGGHGVIDDGVECRIMVGYFPEGFAVLQLEKV 468
Query: 493 RVWELVLEPRAELGEGGDDGWIE 425
W+LVLEP E EGGDD +E
Sbjct: 467 WFWQLVLEPGPEFREGGDDVGLE 399
Score = 73.5 bits (154), Expect(2) = 1e-031
Identities = 36/85 (42%), Positives = 46/85 (54%)
Frame = -1 / -2
Query: 298 AEDIGGC*HAHQATEAGNSGRVEMDXXXXXXXXXXXAMEVDGIGNSEVYCGLERHGLHER 119
AED G H H+A +A + GRVE AM VDG+G++EV GL H
Sbjct: 278 AEDAGDSEHTHKAAQAADLGRVERSYSSNLGEGSGTAMVVDGVGDAEVQAGL*CH*FDVA 99
Query: 118 EGGVPELELRIEQALVRAVVGAELH 44
+G VPELEL IEQ L+ A++ H
Sbjct: 98 KGDVPELELSIEQTLIGALLPGAPH 24
Score = 35.4 bits (71), Expect(3) = 8e-056
Identities = 17/32 (53%), Positives = 18/32 (56%)
Frame = +2 / +3
Query: 293 FGTQQPRGGSDDDSEPVYTLTPVSRLLIGSQS 388
F QQP D E VYTLT VS LL+ S S
Sbjct: 273 FSVQQPSPRDDVQVELVYTLTAVSHLLVSSAS 368
>gb|BI960501.1|BI960501 HVSMEn0024N01f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0024N01f, mRNA sequence
Length = 660
Score = 122 bits (260), Expect(3) = 1e-055
Identities = 48/98 (48%), Positives = 67/98 (68%)
Frame = +2 / +2
Query: 386 SSQLAQTPLAAMVLDPTIVSPFSELGAWFQHELPDPCIFKHTHGRGIWELTKDDATFDAL 565
S+ + P+ + L P IVS FSELGAWFQH+LP+P +FK HG+ WE+ +A F+ +
Sbjct: 359 SASVNIVPVINLQLQPNIVSSFSELGAWFQHKLPEPDLFKLKHGKTFWEIAHHNAAFNTI 538
Query: 566 VNDGLASDSQLIVDVAIKQSAEVFQGISSLVDVGGGIG 679
VND +ASDS+ ++D+AI++ VF GI SLVDV G
Sbjct: 539 VNDAMASDSRFLMDIAIRECGSVFXGIGSLVDVARSHG 652
Score = 109 bits (232), Expect(2) = 2e-043
Identities = 50/90 (55%), Positives = 59/90 (65%)
Frame = -2 / -1
Query: 309 GCWVPKTLVVVSTRIRRRRLETLDGWRWTLLSIWDRLAAPPWRWMASAIRRCIADLSAMD 130
GCW KT VSTRIRRRR + LDGW IW+R+AAPPW WMASA+ R D SA+D
Sbjct: 288 GCWTLKTPETVSTRIRRRRQQILDGWSVATAPIWERVAAPPWWWMASAMPRSKQDFSAID 109
Query: 129 FMNAKVVCQSSSCASSKLWSVLLLGLSSMI 40
K +CQSSS ASSK SV +S++I
Sbjct: 108 LT*PKEMCQSSS*ASSKP*SVRCSRVSTII 19
Score = 98.7 bits (209), Expect(3) = 1e-055
Identities = 43/66 (65%), Positives = 50/66 (75%)
Frame = +2 / +2
Query: 41 IMELSPNNSTDQSLLDAQLELWHTTFAFMKSMALKSAIHLRIADAIHLHGGAASLSQILS 220
IM L+ TDQ LLDAQLELWH +F ++KSMALKS + L IADAIH HGGAA+LSQI +
Sbjct: 20 IMVLTREQRTDQGLLDAQLELWHISFGYVKSMALKSCLDLGIADAIHHHGGAATLSQIGA 199
Query: 221 KVHLHP 238
LHP
Sbjct: 200 VATLHP 217
Score = 88.1 bits (186), Expect(2) = 2e-043
Identities = 41/85 (48%), Positives = 52/85 (61%)
Frame = -1 / -3
Query: 679 TDAPTDVDERAYPLEDLCALLDGNVDDELAVGSQPVVD*GVEGRVIFGQLPDASAVRVLE 500
T A +VD+ AY ED AL DG+V +E A+G V+D GVE R++ G P+ AV LE
Sbjct: 652 TMASGNVDQGAYTXEDAAALPDGDVHEEPAIGGHGVIDDGVECRIMVGYFPEGFAVLQLE 473
Query: 499 DARVWELVLEPRAELGEGGDDGWIE 425
W+LVLEP E EGGDD +E
Sbjct: 472 KVWFWQLVLEPGPEFREGGDDVGLE 398
Score = 83.5 bits (176), Expect(2) = 2e-032
Identities = 45/86 (52%), Positives = 47/86 (54%)
Frame = -2 / -1
Query: 663 TSTSELIPWKTSALCLMATSTMSWLSEANPSLTRASKVASSLVNSQMPRPCVCLKMHGSG 484
TST E IP KT LMA S + LSEA SLT A SQ PC LK GSG
Sbjct: 636 TSTREPIPXKTLPHSLMAMSMRNRLSEAMASLTMVLNAALWWAISQKVLPCFNLKRSGSG 457
Query: 483 SSCWNHAPSSEKGETMVGSSTMAANG 406
S CWN APSSEK ETM+G S G
Sbjct: 456 SLCWNQAPSSEKEETMLGWSCRLMTG 379
Score = 76.2 bits (160), Expect(2) = 2e-032
Identities = 37/85 (43%), Positives = 47/85 (55%)
Frame = -1 / -3
Query: 298 AEDIGGC*HAHQATEAGNSGRVEMDXXXXXXXXXXXAMEVDGIGNSEVYCGLERHGLHER 119
AED G H H+A +A + GRVE AM VDG+G++EV GL H
Sbjct: 277 AEDAGDSEHTHKAAQAADLGRVERSYSSNLGEGSGTAMVVDGVGDAEVQAGL*CH*FDVA 98
Query: 118 EGGVPELELRIEQALVRAVVGAELH 44
+G VPELEL IEQ L+ A++ E H
Sbjct: 97 KGDVPELELSIEQTLIGALLPGEHH 23
Score = 35.4 bits (71), Expect(3) = 1e-055
Identities = 17/32 (53%), Positives = 18/32 (56%)
Frame = +2 / +2
Query: 293 FGTQQPRGGSDDDSEPVYTLTPVSRLLIGSQS 388
F QQP D E VYTLT VS LL+ S S
Sbjct: 272 FSVQQPSPRDDVQVELVYTLTAVSHLLVSSAS 367
>gb|AV917258.1|AV917258 AV917258 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags18c14 5', mRNA sequence
Length = 582
Score = 210 bits (452), Expect = 2e-053
Identities = 82/173 (47%), Positives = 119/173 (68%)
Frame = +2 / +1
Query: 629 EVFQGISSLVDVGGGIGTAAQAISKAFPHVKCSVLDLAHVVAKAPTHTDVQFIAGDMFES 808
++F+G+ SL D GG GT A+A+ KA+PH+KC+VLDL V+ KAP V ++AGD+F +
Sbjct: 16 DIFKGLESLTDCCGGDGTTARALVKAYPHIKCTVLDLPKVIDKAPKDGVVNYVAGDLFHT 195
Query: 809 IPPADAVLLKSVLHDWDHDDCVKILKNCKKAIPPREAGGKVIIINMVVGAGPSDMKHKEM 988
+P + AV+LK VLH W +DCVKIL CKKAIPP + GGK+III++V+G + +
Sbjct: 196 VPSSQAVMLKLVLHFWSDEDCVKILTQCKKAIPPHDEGGKIIIIDIVIGPSLGPIMFEAQ 375
Query: 989 QAIFDVYIMFINGMERDEQEWSKIFSEAGYSDYRIIPVLGVRSIIEVYP*PFV 1147
+ + ++ G++R E +W K+F EAG+ DY+I+ LG R +IEVYP* V
Sbjct: 376 LLMDMLMMVTTRGVQRSENDWRKLFMEAGFKDYKIVRKLGARCVIEVYP*DVV 534
Score = 140 bits (301), Expect = 1e-032
Identities = 78/178 (43%), Positives = 96/178 (53%)
Frame = -2 / -2
Query: 1155 PSYTNGYG*TSIIDRTPKTGIIL*SLYPASEKILLHSCSSRSMPLMNMI*TSNMACISLC 976
P T YG*TSI R P IL*SL PAS L S S R PL+ I + ++ +
Sbjct: 542 P*STTSYG*TSITHRAPSFLTIL*SLNPASMNSLRQSFSLRWTPLVVTIMSISIRSWASN 363
Query: 975 FMSDGPAPTTMFIIITFPPASLGGIAFLQFFSIFTQSSWSQSCKTDFNSTASAGGMLSNM 796
+ P TM +II FPP+S GG+AFL + IFTQSS Q C T + TA G + N
Sbjct: 362 IIGPKDGPITMSMIIIFPPSSCGGMAFLHWVKIFTQSSSLQKCSTSLSMTA*EDGTVWNR 183
Query: 795 SPAINCTSV*VGAFATTWARSSTLHLTCGNAFEMAWAAVPMPPPTSTSELIPWKTSAL 622
SPA T+ GA + T+ RS+T+HL CG A A A VP PP S + P K S L
Sbjct: 182 SPAT*LTTPSFGALSITFGRSNTVHLMCG*ALTRALAVVPSPPQQSVRDSSPLKMSPL 9
>gb|AV922427.1|AV922427 AV922427 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags18c14 3', mRNA sequence
Length = 530
Score = 210 bits (452), Expect = 2e-053
Identities = 82/173 (47%), Positives = 119/173 (68%)
Frame = +2 / -2
Query: 629 EVFQGISSLVDVGGGIGTAAQAISKAFPHVKCSVLDLAHVVAKAPTHTDVQFIAGDMFES 808
++F+G+ SL D GG GT A+A+ KA+PH+KC+VLDL V+ KAP V ++AGD+F +
Sbjct: 526 DIFKGLESLTDCCGGDGTTARALVKAYPHIKCTVLDLPKVIDKAPKDGVVNYVAGDLFHT 347
Query: 809 IPPADAVLLKSVLHDWDHDDCVKILKNCKKAIPPREAGGKVIIINMVVGAGPSDMKHKEM 988
+P + AV+LK VLH W +DCVKIL CKKAIPP + GGK+III++V+G + +
Sbjct: 346 VPSSQAVMLKLVLHFWSDEDCVKILTQCKKAIPPHDEGGKIIIIDIVIGPSLGPIMFEAQ 167
Query: 989 QAIFDVYIMFINGMERDEQEWSKIFSEAGYSDYRIIPVLGVRSIIEVYP*PFV 1147
+ + ++ G++R E +W K+F EAG+ DY+I+ LG R +IEVYP* V
Sbjct: 166 LLMDMLMMVTTRGVQRSENDWRKLFMEAGFKDYKIVRKLGARCVIEVYP*DVV 8
Score = 138 bits (297), Expect = 5e-032
Identities = 76/173 (43%), Positives = 94/173 (54%)
Frame = -2 / +3
Query: 1146 TNGYG*TSIIDRTPKTGIIL*SLYPASEKILLHSCSSRSMPLMNMI*TSNMACISLCFMS 967
T YG*TSI R P IL*SL PAS L S S R PL+ I + ++ + +
Sbjct: 9 TTSYG*TSITHRAPSFLTIL*SLNPASMNSLRQSFSLRWTPLVVTIMSISIRSWASNIIG 188
Query: 966 DGPAPTTMFIIITFPPASLGGIAFLQFFSIFTQSSWSQSCKTDFNSTASAGGMLSNMSPA 787
P TM +II FPP+S GG+AFL + IFTQSS Q C T + TA G + N SPA
Sbjct: 189 PKDGPITMSMIIIFPPSSCGGMAFLHWVKIFTQSSSLQKCSTSLSMTA*EDGTVWNRSPA 368
Query: 786 INCTSV*VGAFATTWARSSTLHLTCGNAFEMAWAAVPMPPPTSTSELIPWKTS 628
T+ GA + T+ RS+T+HL CG A A A VP PP S + P K S
Sbjct: 369 T*LTTPSFGALSITFGRSNTVHLMCG*ALTRALAVVPSPPQQSVRDSSPLKMS 527
>gb|BJ467760.1|BJ467760 BJ467760 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags29l10 3', mRNA sequence
Length = 779
Score = 167 bits (359), Expect(2) = 8e-053
Identities = 64/122 (52%), Positives = 89/122 (72%)
Frame = +2 / -2
Query: 590 SQLIVDVAIKQSAEVFQGISSLVDVGGGIGTAAQAISKAFPHVKCSVLDLAHVVAKAPTH 769
+ L + +++ ++F+G+ SL D GG GT A+A+ KA+PH+KC+VLDL VV KAP
Sbjct: 754 TNLGIATILRECGDIFKGLDSLTDCCGGDGTTARALVKAYPHIKCTVLDLPKVVEKAPAD 575
Query: 770 TDVQFIAGDMFESIPPADAVLLKSVLHDWDHDDCVKILKNCKKAIPPREAGGKVIIINMV 949
+ ++AGD+F ++PP+ V+LK VLH W +DCVKIL C+KAIPPRE GGKVIII +V
Sbjct: 574 GVINYVAGDLFHTVPPSQVVMLKLVLHFWSDEDCVKILAQCRKAIPPREEGGKVIIIEIV 395
Query: 950 VG 955
VG
Sbjct: 394 VG 389
Score = 116 bits (248), Expect(2) = 2e-028
Identities = 55/109 (50%), Positives = 67/109 (61%)
Frame = -2 / +3
Query: 954 PTTMFIIITFPPASLGGIAFLQFFSIFTQSSWSQSCKTDFNSTASAGGMLSNMSPAINCT 775
PTT+ +IITFPP+S GG+AFL + IFTQSS Q C T + T GG + N SPA
Sbjct: 390 PTTISMIITFPPSSRGGMAFLHWARIFTQSSSLQKCSTSLSITT*DGGTVWNRSPAT*LM 569
Query: 774 SV*VGAFATTWARSSTLHLTCGNAFEMAWAAVPMPPPTSTSELIPWKTS 628
+ GAF+TT+ RS+T+HL CG A A A VP PP S E P K S
Sbjct: 570 TPSAGAFSTTFGRSNTVHLMCG*ALTRALAVVPSPPQQSVRESSPLKMS 716
Score = 61.1 bits (127), Expect(2) = 8e-053
Identities = 22/41 (53%), Positives = 31/41 (75%)
Frame = +2 / -2
Query: 1025 GMERDEQEWSKIFSEAGYSDYRIIPVLGVRSIIEVYP*PFV 1147
G +RDE W ++F +AG++DY+I+ LG RS+IEVYP* V
Sbjct: 319 GGQRDENHWCELFKKAGFTDYKIVKKLGARSVIEVYP*DIV 197
Score = 30.4 bits (60), Expect(2) = 2e-028
Identities = 15/26 (57%), Positives = 17/26 (65%)
Frame = -2 / +3
Query: 1146 TNGYG*TSIIDRTPKTGIIL*SLYPA 1069
T YG*TS+ DR P IL*S+ PA
Sbjct: 198 TISYG*TSMTDRAPNFFTIL*SVNPA 275
>gb|BJ457207.1|BJ457207 BJ457207 K. Sato unpublished cDNA library, cv. Akashinriki vegetative
stage leaves Hordeum vulgare subsp. vulgare cDNA clone
baak26l07 3', mRNA sequence
Length = 565
Score = 169 bits (363), Expect(3) = 1e-052
Identities = 67/103 (65%), Positives = 85/103 (82%)
Frame = +2 / -3
Query: 776 VQFIAGDMFESIPPADAVLLKSVLHDWDHDDCVKILKNCKKAIPPREAGGKVIIINMVVG 955
+ F+AGDMF+SIP ADAVLLK++LHDW HDDCVKILK CK+AIP R AGGKVIII+MV G
Sbjct: 449 LSFVAGDMFQSIPSADAVLLKNILHDWGHDDCVKILKCCKEAIPARNAGGKVIIIDMVRG 270
Query: 956 AGPSDMKHKEMQAIFDVYIMFINGMERDEQEWSKIFSEAGYSD 1084
+ D K EM+AI ++++M+I G+ER+E EW IFS+AG+SD
Sbjct: 269 SANGDRKINEMEAIQNLFMMYITGIERNEIEWKXIFSDAGFSD 141
Score = 116 bits (247), Expect(2) = 2e-028
Identities = 57/99 (57%), Positives = 66/99 (66%)
Frame = -2 / +1
Query: 1083 SLYPASEKILLHSCSSRSMPLMNMI*TSNMACISLCFMSDGPAPTTMFIIITFPPASLGG 904
SL PASE L HS S RS+P+M ++ MA ISL F+S P T+ I+ITFPPA L G
Sbjct: 142 SLKPASENXLFHSISFRSIPVMYIMNKFCMASISLIFLSPFADPLTISIMITFPPAFLAG 321
Query: 903 IAFLQFFSIFTQSSWSQSCKTDFNSTASAGGMLSNMSPA 787
+A LQ SI TQSSW QSCK + TASA GM NMSPA
Sbjct: 322 MASLQHLSILTQSSWPQSCKMFLSKTASADGMD*NMSPA 438
Score = 44.1 bits (90), Expect(3) = 1e-052
Identities = 16/27 (59%), Positives = 20/27 (74%)
Frame = +2 / -3
Query: 671 GIGTAAQAISKAFPHVKCSVLDLAHVV 751
G G Q I+KAFP +KC+V+DL HVV
Sbjct: 563 GNGAGTQVIAKAFPRIKCTVMDLPHVV 483
Score = 33.1 bits (66), Expect(3) = 1e-052
Identities = 13/19 (68%), Positives = 15/19 (78%)
Frame = +2 / -3
Query: 1082 DYRIIPVLGVRSIIEVYP* 1138
DY I PVLG S+IE+YP*
Sbjct: 140 DYXIXPVLGPYSVIEIYP* 84
Score = 30.9 bits (61), Expect(2) = 2e-028
Identities = 14/27 (51%), Positives = 18/27 (66%)
Frame = -3 / +2
Query: 752 QRRGQGPARYT*RAGTPLRWLGPPYRC 672
++R +GP+R T* AGTP R L P C
Sbjct: 482 RQREEGPSRCT*CAGTPWRSLVCPRHC 562
>gb|BI958645.1|BI958645 HVSMEn0016A21f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0016A21f, mRNA sequence
Length = 624
Score = 111 bits (236), Expect(3) = 3e-052
Identities = 41/86 (47%), Positives = 61/86 (70%)
Frame = +2 / +1
Query: 386 SSQLAQTPLAAMVLDPTIVSPFSELGAWFQHELPDPCIFKHTHGRGIWELTKDDATFDAL 565
S+ + P+ + L P IVS FSELGAWFQH+LP+P +FK HG+ WE+ +A F+ +
Sbjct: 367 SASVNIVPVINLQLQPNIVSSFSELGAWFQHKLPEPDLFKLKHGKTFWEIAHHNAAFNTI 546
Query: 566 VNDGLASDSQLIVDVAIKQSAEVFQG 643
VND +ASDS+ ++D+AI++ VF+G
Sbjct: 547 VNDAMASDSRFLMDIAIRECGSVFEG 624
Score = 109 bits (232), Expect(2) = 6e-041
Identities = 50/90 (55%), Positives = 59/90 (65%)
Frame = -2 / -2
Query: 309 GCWVPKTLVVVSTRIRRRRLETLDGWRWTLLSIWDRLAAPPWRWMASAIRRCIADLSAMD 130
GCW KT VSTRIRRRR + LDGW IW+R+AAPPW WMASA+ R D SA+D
Sbjct: 296 GCWTLKTPETVSTRIRRRRQQILDGWSVATAPIWERVAAPPWWWMASAMPRSKQDFSAID 117
Query: 129 FMNAKVVCQSSSCASSKLWSVLLLGLSSMI 40
K +CQSSS ASSK SV +S++I
Sbjct: 116 LT*PKEMCQSSS*ASSKP*SVRCSRVSTII 27
Score = 98.7 bits (209), Expect(3) = 3e-052
Identities = 43/66 (65%), Positives = 50/66 (75%)
Frame = +2 / +1
Query: 41 IMELSPNNSTDQSLLDAQLELWHTTFAFMKSMALKSAIHLRIADAIHLHGGAASLSQILS 220
IM L+ TDQ LLDAQLELWH +F ++KSMALKS + L IADAIH HGGAA+LSQI +
Sbjct: 28 IMVLTREQRTDQGLLDAQLELWHISFGYVKSMALKSCLDLGIADAIHHHGGAATLSQIGA 207
Query: 221 KVHLHP 238
LHP
Sbjct: 208 VATLHP 225
Score = 79.4 bits (167), Expect(2) = 6e-041
Identities = 36/72 (50%), Positives = 45/72 (62%)
Frame = -1 / -1
Query: 640 LEDLCALLDGNVDDELAVGSQPVVD*GVEGRVIFGQLPDASAVRVLEDARVWELVLEPRA 461
LED AL DG+V +E A+G V+D GVE R++ G P+ AV LE W+LVLEP
Sbjct: 621 LEDAAALPDGDVHEEPAIGGHGVIDDGVECRIMVGYFPEGFAVLQLEKVWFWQLVLEPGP 442
Query: 460 ELGEGGDDGWIE 425
E EGGDD +E
Sbjct: 441 EFREGGDDVGLE 406
Score = 76.2 bits (160), Expect(2) = 1e-029
Identities = 37/85 (43%), Positives = 47/85 (55%)
Frame = -1 / -1
Query: 298 AEDIGGC*HAHQATEAGNSGRVEMDXXXXXXXXXXXAMEVDGIGNSEVYCGLERHGLHER 119
AED G H H+A +A + GRVE AM VDG+G++EV GL H
Sbjct: 285 AEDAGDSEHTHKAAQAADLGRVERSYSSNLGEGSGTAMVVDGVGDAEVQAGL*CH*FDVA 106
Query: 118 EGGVPELELRIEQALVRAVVGAELH 44
+G VPELEL IEQ L+ A++ E H
Sbjct: 105 KGDVPELELSIEQTLIGALLPGEHH 31
Score = 74.4 bits (156), Expect(2) = 1e-029
Identities = 40/79 (50%), Positives = 42/79 (53%)
Frame = -2 / -2
Query: 642 PWKTSALCLMATSTMSWLSEANPSLTRASKVASSLVNSQMPRPCVCLKMHGSGSSCWNHA 463
P KT LMA S + LSEA SLT A SQ PC LK GSGS CWN A
Sbjct: 623 PSKTLPHSLMAMSMRNRLSEAMASLTMVLNAALWWAISQKVLPCFNLKRSGSGSLCWNQA 444
Query: 462 PSSEKGETMVGSSTMAANG 406
PSSEK ETM+G S G
Sbjct: 443 PSSEKEETMLGWSCRLMTG 387
Score = 35.4 bits (71), Expect(3) = 3e-052
Identities = 17/32 (53%), Positives = 18/32 (56%)
Frame = +2 / +1
Query: 293 FGTQQPRGGSDDDSEPVYTLTPVSRLLIGSQS 388
F QQP D E VYTLT VS LL+ S S
Sbjct: 280 FSVQQPSPRDDVQVELVYTLTAVSHLLVSSAS 375
>gb|BG344915.2|BG344915 HVSMEg0016N12f Hordeum vulgare pre-anthesis spike EST library
HVcDNA0008 (white to yellow anther) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEg0016N12f, mRNA sequence
Length = 635
Score = 109 bits (233), Expect(3) = 7e-052
Identities = 41/89 (46%), Positives = 60/89 (67%)
Frame = +2 / +3
Query: 386 SSQLAQTPLAAMVLDPTIVSPFSELGAWFQHELPDPCIFKHTHGRGIWELTKDDATFDAL 565
S+ + P+ + L P IVS FSELGAWFQH+LP+P +FK HG+ WE+ +A F+ +
Sbjct: 366 SASVNIVPVINLQLQPNIVSSFSELGAWFQHKLPEPDLFKLKHGKTFWEIAHHNAAFNTI 545
Query: 566 VNDGLASDSQLIVDVAIKQSAEVFQGISS 652
VND +A DS+ ++D+ I + VF+GI S
Sbjct: 546 VNDAMAXDSRFLMDIXIXECGSVFEGIGS 632
Score = 109 bits (232), Expect(2) = 8e-041
Identities = 50/90 (55%), Positives = 59/90 (65%)
Frame = -2 / -2
Query: 309 GCWVPKTLVVVSTRIRRRRLETLDGWRWTLLSIWDRLAAPPWRWMASAIRRCIADLSAMD 130
GCW KT VSTRIRRRR + LDGW IW+R+AAPPW WMASA+ R D SA+D
Sbjct: 295 GCWTLKTPETVSTRIRRRRQQILDGWSVATAPIWERVAAPPWWWMASAMPRSKQDFSAID 116
Query: 129 FMNAKVVCQSSSCASSKLWSVLLLGLSSMI 40
K +CQSSS ASSK SV +S++I
Sbjct: 115 LT*PKEMCQSSS*ASSKP*SVRCSRVSTII 26
Score = 98.7 bits (209), Expect(3) = 7e-052
Identities = 43/66 (65%), Positives = 50/66 (75%)
Frame = +2 / +3
Query: 41 IMELSPNNSTDQSLLDAQLELWHTTFAFMKSMALKSAIHLRIADAIHLHGGAASLSQILS 220
IM L+ TDQ LLDAQLELWH +F ++KSMALKS + L IADAIH HGGAA+LSQI +
Sbjct: 27 IMVLTREQRTDQGLLDAQLELWHISFGYVKSMALKSCLDLGIADAIHHHGGAATLSQIGA 206
Query: 221 KVHLHP 238
LHP
Sbjct: 207 VATLHP 224
Score = 79.0 bits (166), Expect(2) = 8e-041
Identities = 36/75 (48%), Positives = 45/75 (60%)
Frame = -1 / -1
Query: 649 AYPLEDLCALLDGNVDDELAVGSQPVVD*GVEGRVIFGQLPDASAVRVLEDARVWELVLE 470
AY LED AL D +V +E A+ V+D GVE R++ G P+ AV LE W+LVLE
Sbjct: 629 AYTLEDAAALXDXDVHEEPAIXGHGVIDDGVECRIMVGYFPEGFAVLQLEKVWFWQLVLE 450
Query: 469 PRAELGEGGDDGWIE 425
P E EGGDD +E
Sbjct: 449 PGXEFREGGDDVGLE 405
Score = 76.2 bits (160), Expect(2) = 2e-028
Identities = 37/85 (43%), Positives = 47/85 (55%)
Frame = -1 / -1
Query: 298 AEDIGGC*HAHQATEAGNSGRVEMDXXXXXXXXXXXAMEVDGIGNSEVYCGLERHGLHER 119
AED G H H+A +A + GRVE AM VDG+G++EV GL H
Sbjct: 284 AEDAGDSEHTHKAAQAADLGRVERSYSSNLGEGSGTAMVVDGVGDAEVQAGL*CH*FDVA 105
Query: 118 EGGVPELELRIEQALVRAVVGAELH 44
+G VPELEL IEQ L+ A++ E H
Sbjct: 104 KGDVPELELSIEQTLIGALLPGEHH 30
Score = 70.3 bits (147), Expect(2) = 2e-028
Identities = 39/82 (47%), Positives = 41/82 (50%)
Frame = -2 / -2
Query: 651 ELIPWKTSALCLMATSTMSWLSEANPSLTRASKVASSLVNSQMPRPCVCLKMHGSGSSCW 472
E IP KT M S + LS A SLT A SQ PC LK GSGS CW
Sbjct: 631 EPIPSKTLPHSXMXMSMRNRLSXAMASLTMVLNAALWWAISQKVLPCFNLKRSGSGSLCW 452
Query: 471 NHAPSSEKGETMVGSSTMAANG 406
N APSSEK ETM+G S G
Sbjct: 451 NQAPSSEKEETMLGWSCRLMTG 386
Score = 35.4 bits (71), Expect(3) = 7e-052
Identities = 17/32 (53%), Positives = 18/32 (56%)
Frame = +2 / +3
Query: 293 FGTQQPRGGSDDDSEPVYTLTPVSRLLIGSQS 388
F QQP D E VYTLT VS LL+ S S
Sbjct: 279 FSVQQPSPRDDVQVELVYTLTAVSHLLVSSAS 374
>gb|AL503330.1|AL503330 AL503330 Hordeum vulgare Barke roots Hordeum vulgare subsp. vulgare
cDNA clone HW01K22T 5', mRNA sequence
Length = 700
Score = 204 bits (440), Expect = 9e-052
Identities = 83/184 (45%), Positives = 119/184 (64%)
Frame = +2 / +1
Query: 545 DATFDALVNDGLASDSQLIVDVAIKQSAEVFQGISSLVDVGGGIGTAAQAISKAFPHVKC 724
D DALV DGL + L + +++ ++F+G+ SL D GG G A+AI+KA PHVKC
Sbjct: 145 DPELDALVTDGLEAHDNLGIGTIMRECHDLFKGLESLTDCCGGDGKTARAITKAHPHVKC 324
Query: 725 SVLDLAHVVAKAPTHTDVQFIAGDMFESIPPADAVLLKSVLHDWDHDDCVKILKNCKKAI 904
+VLDL V+ K P+ V ++AGD+F ++P A AV+LK VLH W DDCVKIL CK AI
Sbjct: 325 TVLDLPKVIEKTPSDCVVNYVAGDLFHTVPKAQAVMLKLVLHHWSDDDCVKILTQCKNAI 504
Query: 905 PPREAGGKVIIINMVVGAGPSDMKHKEMQAIFDVYIMFINGMERDEQEWSKIFSEAGYSD 1084
P RE GGKVI+I++VV + + + + ++F G +R E +W +F +AG++D
Sbjct: 505 PSREEGGKVIVIDIVVEPSLGPVMFEAQTLMDMLMLVFTRGRQRSENDWRDLFMKAGFTD 684
Query: 1085 YRII 1096
Y+II
Sbjct: 685 YKII 696
Score = 120 bits (256), Expect = 2e-026
Identities = 68/156 (43%), Positives = 85/156 (54%)
Frame = -2 / -3
Query: 1095 IIL*SLYPASEKILLHSCSSRSMPLMNMI*TSNMACISLCFMSDGPAPTTMFIIITFPPA 916
+IL*S+ PA K S S R PL+N + +M + TT+ + ITFPP+
Sbjct: 695 MIL*SVNPAFMKRSRQSFSLR*RPLVNTSMSMSMRVWASNMTGPNDGSTTISMTITFPPS 516
Query: 915 SLGGIAFLQFFSIFTQSSWSQSCKTDFNSTASAGGMLSNMSPAINCTSV*VGAFATTWAR 736
S G+AFL + IFTQSS Q C T F+ TA A G + N SPA T+ G F+ T R
Sbjct: 515 SREGMAFLHWVRIFTQSSSLQWCSTSFSITA*AFGTVWNRSPAT*LTTQSDGVFSMTLGR 336
Query: 735 SSTLHLTCGNAFEMAWAAVPMPPPTSTSELIPWKTS 628
SST+HLTCG A MA A P PP S + P K S
Sbjct: 335 SSTVHLTCGCALVMALAVFPSPPQQSVRDSSPLKRS 228
>gb|AL503735.1|AL503735 AL503735 Hordeum vulgare Barke roots Hordeum vulgare subsp. vulgare
cDNA clone HW03D24T 5', mRNA sequence
Length = 700
Score = 202 bits (436), Expect = 3e-051
Identities = 80/177 (45%), Positives = 117/177 (66%)
Frame = +2 / +1
Query: 602 VDVAIKQSAEVFQGISSLVDVGGGIGTAAQAISKAFPHVKCSVLDLAHVVAKAPTHTDVQ 781
+ +++ ++F+G+ SL D GG G A+AI+KA PHVKC+VLDL V+ K P+ V
Sbjct: 19 IGTIMRECHDLFKGLESLTDCCGGDGKTARAITKAHPHVKCTVLDLPKVIEKTPSDCVVN 198
Query: 782 FIAGDMFESIPPADAVLLKSVLHDWDHDDCVKILKNCKKAIPPREAGGKVIIINMVVGAG 961
++AGD+F ++P A AV+LK VLH W DDCVKIL CK AIP RE GGKVI+I++VV
Sbjct: 199 YVAGDLFHTVPKAQAVMLKLVLHHWSDDDCVKILTQCKNAIPSREEGGKVIVIDIVVEPS 378
Query: 962 PSDMKHKEMQAIFDVYIMFINGMERDEQEWSKIFSEAGYSDYRIIPVLGVRSIIEVY 1132
+ + + + ++F G +R E +W +F +AG++DY+II +G R +IEVY
Sbjct: 379 LGPVMFEAQTLMDMLMLVFTRGRQRSENDWRDLFMKAGFTDYKIIKKMGARGVIEVY 549
Score = 127 bits (271), Expect = 2e-028
Identities = 74/170 (43%), Positives = 92/170 (54%)
Frame = -2 / -3
Query: 1137 YG*TSIIDRTPKTGIIL*SLYPASEKILLHSCSSRSMPLMNMI*TSNMACISLCFMSDGP 958
Y *TS+ R P +IL*S+ PA K S S R PL+N + +M +
Sbjct: 554 YL*TSMTPRAPIFLMIL*SVNPAFMKRSRQSFSLR*RPLVNTSMSMSMRVWASNMTGPND 375
Query: 957 APTTMFIIITFPPASLGGIAFLQFFSIFTQSSWSQSCKTDFNSTASAGGMLSNMSPAINC 778
TT+ + ITFPP+S G+AFL + IFTQSS Q C T F+ TA A G + N SPA
Sbjct: 374 GSTTISMTITFPPSSREGMAFLHWVRIFTQSSSLQWCSTSFSITA*AFGTVWNRSPAT*L 195
Query: 777 TSV*VGAFATTWARSSTLHLTCGNAFEMAWAAVPMPPPTSTSELIPWKTS 628
T+ G F+ T RSST+HLTCG A MA A P PP S + P K S
Sbjct: 194 TTQSDGVFSMTLGRSSTVHLTCGCALVMALAVFPSPPQQSVRDSSPLKRS 45
>gb|BF259348.2|BF259348 HVSMEf0019F16f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEf0019F16f, mRNA sequence
Length = 574
Score = 165 bits (354), Expect(2) = 1e-050
Identities = 66/142 (46%), Positives = 95/142 (66%)
Frame = +2 / +3
Query: 563 LVNDGLASDSQLIVDVAIKQSAEVFQGISSLVDVGGGIGTAAQAISKAFPHVKCSVLDLA 742
L + LA+ + + +++ +F G+ SL D GG GT A+AI KAFPH+KC+VLDL
Sbjct: 6 LFYEALAAHDHMGIGTVLRECRGLFDGLQSLTDCCGGDGTTARAIVKAFPHIKCNVLDLP 185
Query: 743 HVVAKAPTHTDVQFIAGDMFESIPPADAVLLKSVLHDWDHDDCVKILKNCKKAIPPREAG 922
V+ K P+ V ++AGD+ ++PPA AV+LK VLH W +DC+ IL CKKAIP RE G
Sbjct: 186 KVIDKVPSDGVVNYVAGDLLHTVPPAQAVMLKLVLHFWSDEDCINILAQCKKAIPSREMG 365
Query: 923 GKVIIINMVVGAGPSDMKHKEM 988
GKVIII++V+G+ + + E+
Sbjct: 366 GKVIIIDIVLGSSLATITETEL 431
Score = 107 bits (228), Expect(2) = 1e-027
Identities = 50/105 (47%), Positives = 63/105 (60%)
Frame = -2 / -1
Query: 954 PTTMFIIITFPPASLGGIAFLQFFSIFTQSSWSQSCKTDFNSTASAGGMLSNMSPAINCT 775
P TM ++ITFPP SL G+AFL + QSS Q C+T + TA AGG + SPA T
Sbjct: 397 PNTMSMMITFPPISLEGMAFLH*ARMLMQSSSLQKCRTSLSITA*AGGTVCKRSPAT*LT 218
Query: 774 SV*VGAFATTWARSSTLHLTCGNAFEMAWAAVPMPPPTSTSELIP 640
+ +G + T+ RS+TLHL CG A MA A VP PP S S+ P
Sbjct: 217 TPSLGTLSITFGRSNTLHLICGKALTMALAVVPSPPQQSVSDCRP 83
Score = 56.1 bits (116), Expect(2) = 1e-050
Identities = 21/36 (58%), Positives = 28/36 (77%)
Frame = +2 / +3
Query: 1025 GMERDEQEWSKIFSEAGYSDYRIIPVLGVRSIIEVY 1132
G +R+E+EWS +F +AG+SDY II LG R +IEVY
Sbjct: 465 GRQRNEKEWSMLFMKAGFSDYEIIKKLGHRGVIEVY 572
Score = 36.8 bits (74), Expect(2) = 1e-027
Identities = 20/39 (51%), Positives = 24/39 (61%)
Frame = -2 / -1
Query: 1128 TSIIDRTPKTGIIL*SLYPASEKILLHSCSSRSMPLMNM 1012
TS+ R P II *SL PA K +LHS S R PL++M
Sbjct: 568 TSMTPRCPSFLIIS*SLNPAFIKSMLHSFSLRCRPLVHM 452
>gb|AV930320.1|AV930320 AV930320 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp.
vulgare cDNA clone basd22a15 3', mRNA sequence
Length = 664
Score = 155 bits (333), Expect(2) = 2e-050
Identities = 61/113 (53%), Positives = 81/113 (71%)
Frame = +2 / -3
Query: 650 SLVDVGGGIGTAAQAISKAFPHVKCSVLDLAHVVAKAPTHTDVQFIAGDMFESIPPADAV 829
SL D GG GT A+AI KAFPH+KC+VLDL V+ K P+ V ++AGD+F +IPPA +
Sbjct: 659 SLTDCCGGDGTTARAIVKAFPHIKCNVLDLPKVIEKVPSDGIVNYVAGDLFHAIPPAQVL 480
Query: 830 LLKSVLHDWDHDDCVKILKNCKKAIPPREAGGKVIIINMVVGAGPSDMKHKEM 988
+LK VLH W +DC+ IL CKKAIP RE GGKVI+I++VVG+ ++ E+
Sbjct: 479 MLKLVLHFWSDEDCINILSQCKKAIPSREMGGKVIVIDIVVGSSSKEILETEL 321
Score = 106 bits (226), Expect(2) = 1e-030
Identities = 51/102 (50%), Positives = 60/102 (58%)
Frame = -2 / +1
Query: 954 PTTMFIIITFPPASLGGIAFLQFFSIFTQSSWSQSCKTDFNSTASAGGMLSNMSPAINCT 775
PTT+ I ITFPP S G+AFL I QSS Q C+T + AGGM N SPA T
Sbjct: 355 PTTISITITFPPISRDGMAFLH*DRILMQSSSLQKCRTSLSMRT*AGGMAWNRSPAT*LT 534
Query: 774 SV*VGAFATTWARSSTLHLTCGNAFEMAWAAVPMPPPTSTSE 649
+G F+ T+ RS+TLHL CG A MA A VP PP S S+
Sbjct: 535 IPSLGTFSITFGRSNTLHLICGKALTMALAVVPSPPQQSVSD 660
Score = 64.8 bits (135), Expect(2) = 2e-050
Identities = 25/41 (60%), Positives = 32/41 (78%)
Frame = +2 / -3
Query: 1025 GMERDEQEWSKIFSEAGYSDYRIIPVLGVRSIIEVYP*PFV 1147
G +RDE +WS IF++AG+SDY+I+ LG R IIEVYP* V
Sbjct: 287 GRQRDENDWSTIFTKAGFSDYKIVKKLGARGIIEVYP*DCV 165
Score = 47.3 bits (97), Expect(2) = 1e-030
Identities = 26/50 (52%), Positives = 30/50 (60%)
Frame = -2 / +1
Query: 1164 IYEPSYTNGYG*TSIIDRTPKTGIIL*SLYPASEKILLHSCSSRSMPLMN 1015
I E T YG*TS+I R P IL*SL PA KI+L S SSR P ++
Sbjct: 148 IIEALGTQSYG*TSMIPRAPSFLTIL*SLNPAFVKIVLQSFSSRCRPFVH 297
>gb|BI959987.1|BI959987 HVSMEn0022M02f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0022M02f, mRNA sequence
Length = 629
Score = 113 bits (242), Expect(3) = 3e-047
Identities = 44/90 (48%), Positives = 63/90 (70%)
Frame = +2 / +3
Query: 386 SSQLAQTPLAAMVLDPTIVSPFSELGAWFQHELPDPCIFKHTHGRGIWELTKDDATFDAL 565
S+ + P+ + L P IVS FSELGAWFQH+LP+P +FK HG+ WE+ +A F+ +
Sbjct: 360 SASVNIVPVINLQLQPNIVSSFSELGAWFQHKLPEPDLFKLKHGKTFWEIAHHNAAFNTI 539
Query: 566 VNDGLASDSQLIVDVAIKQSAEVFQGISSL 655
VND +ASDS+ ++D+ I + VF+GISSL
Sbjct: 540 VNDPMASDSRFLMDIPITECGNVFEGISSL 629
Score = 100 bits (214), Expect(2) = 3e-040
Identities = 42/72 (58%), Positives = 48/72 (66%)
Frame = -2 / -2
Query: 309 GCWVPKTLVVVSTRIRRRRLETLDGWRWTLLSIWDRLAAPPWRWMASAIRRCIADLSAMD 130
GCW KT VSTRIRRRR + LDGW IW+R+AAPPW WMASA+ R D SA+D
Sbjct: 289 GCWTLKTPETVSTRIRRRRQQILDGWSVATAPIWERVAAPPWWWMASAMPRSKQDFSAID 110
Query: 129 FMNAKVVCQSSS 94
K +CQSSS
Sbjct: 109 LT*PKEMCQSSS 74
Score = 85.4 bits (180), Expect(2) = 3e-040
Identities = 38/75 (50%), Positives = 48/75 (64%)
Frame = -1 / -1
Query: 649 AYPLEDLCALLDGNVDDELAVGSQPVVD*GVEGRVIFGQLPDASAVRVLEDARVWELVLE 470
AY LED+ AL DG+V +E A+G V+D GVE R++ G P+ AV LE W+LVLE
Sbjct: 623 AYTLEDVAALRDGDVHEEPAIGGHGVIDDGVECRIMVGYFPEGFAVLQLEKVWFWQLVLE 444
Query: 469 PRAELGEGGDDGWIE 425
P E EGGDD +E
Sbjct: 443 PGPEFREGGDDVGLE 399
Score = 79.0 bits (166), Expect(3) = 3e-047
Identities = 33/49 (67%), Positives = 39/49 (79%)
Frame = +2 / +3
Query: 92 QLELWHTTFAFMKSMALKSAIHLRIADAIHLHGGAASLSQILSKVHLHP 238
QLELWH +F ++KSMALKS + L IADAIH HGGAA+LSQI + LHP
Sbjct: 72 QLELWHISFGYVKSMALKSCLDLGIADAIHHHGGAATLSQIGAVATLHP 218
Score = 76.7 bits (161), Expect(2) = 1e-026
Identities = 41/82 (50%), Positives = 44/82 (53%)
Frame = -2 / -2
Query: 651 ELIPWKTSALCLMATSTMSWLSEANPSLTRASKVASSLVNSQMPRPCVCLKMHGSGSSCW 472
ELIP KT +M S + LSEA SLT A SQ PC LK GSGS CW
Sbjct: 625 ELIPSKTLPHSVMGMSMRNRLSEAMGSLTMVLNAALWWAISQKVLPCFNLKRSGSGSLCW 446
Query: 471 NHAPSSEKGETMVGSSTMAANG 406
N APSSEK ETM+G S G
Sbjct: 445 NQAPSSEKEETMLGWSCRLMTG 380
Score = 64.3 bits (134), Expect(2) = 1e-026
Identities = 31/71 (43%), Positives = 39/71 (54%)
Frame = -1 / -1
Query: 298 AEDIGGC*HAHQATEAGNSGRVEMDXXXXXXXXXXXAMEVDGIGNSEVYCGLERHGLHER 119
AED G H H+A +A + GRVE AM VDG+G++EV GL H
Sbjct: 278 AEDAGDSEHTHKAAQAADLGRVERSYSSNLGEGSGTAMVVDGVGDAEVQAGL*CH*FDVA 99
Query: 118 EGGVPELELRI 86
+G VPELELR+
Sbjct: 98 KGDVPELELRM 66
Score = 35.4 bits (71), Expect(3) = 3e-047
Identities = 17/32 (53%), Positives = 18/32 (56%)
Frame = +2 / +3
Query: 293 FGTQQPRGGSDDDSEPVYTLTPVSRLLIGSQS 388
F QQP D E VYTLT VS LL+ S S
Sbjct: 273 FSVQQPSPRDDVQVELVYTLTAVSHLLVSSAS 368
>gb|BM817346.1|BM817346 HC111F01_T3.ab1 HC Hordeum vulgare subsp. vulgare cDNA clone
HC111F01_T3.ab1 similar to Hexaprenyldihydroxybenzoate
methyltransferase,Apigenin
4'-O-methyltransferase,[Myelin basic protein]-arginine
N-methyltransferase,Catechol
O-methyltransferase,Glycoprotein-fucosylgalactoside
alpha-galactosyltransferase,, mRNA sequence
Length = 905
Score = 171 bits (368), Expect(2) = 6e-047
Identities = 71/137 (51%), Positives = 95/137 (69%)
Frame = +2 / +3
Query: 545 DATFDALVNDGLASDSQLIVDVAIKQSAEVFQGISSLVDVGGGIGTAAQAISKAFPHVKC 724
D D LV +GLA+ L + +++ ++F+G+ SL D GG GT A+AI+KA PHVKC
Sbjct: 168 DKELDELVTEGLAAHDNLGIGTIMRECHDLFKGLESLTDCCGGDGTTARAITKAHPHVKC 347
Query: 725 SVLDLAHVVAKAPTHTDVQFIAGDMFESIPPADAVLLKSVLHDWDHDDCVKILKNCKKAI 904
+VLDL V+ KAP+ V +AGD+F S+P + AV+LK VLH W +DCVKIL C+ AI
Sbjct: 348 TVLDLPKVIDKAPSDGIVNCVAGDLFHSVPKSQAVMLKLVLHHWSDEDCVKILSQCRDAI 527
Query: 905 PPREAGGKVIIINMVVG 955
P E GGKVIII++VVG
Sbjct: 528 PSHEEGGKVIIIDIVVG 578
Score = 37.3 bits (75), Expect(2) = 6e-047
Identities = 12/28 (42%), Positives = 20/28 (71%)
Frame = +2 / +3
Query: 1031 ERDEQEWSKIFSEAGYSDYRIIPVLGVR 1114
+R E +W ++F +AG+SDY+I+ L R
Sbjct: 654 QRTENDWHELFMKAGFSDYKIVKKLRAR 737
>gb|AV918157.1|AV918157 AV918157 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags20b03 3', mRNA sequence
Length = 676
Score = 163 bits (350), Expect(2) = 2e-046
Identities = 64/138 (46%), Positives = 91/138 (65%)
Frame = +2 / -1
Query: 719 KCSVLDLAHVVAKAPTHTDVQFIAGDMFESIPPADAVLLKSVLHDWDHDDCVKILKNCKK 898
KC+VLDL V+ K P+ V ++AGD+F ++P A AV+LK VLH W DDCVKIL CK
Sbjct: 559 KCTVLDLPKVIEKTPSDCVVNYVAGDLFHTVPKAQAVMLKLVLHHWSDDDCVKILTQCKN 380
Query: 899 AIPPREAGGKVIIINMVVGAGPSDMKHKEMQAIFDVYIMFINGMERDEQEWSKIFSEAGY 1078
AIP RE GGKVI+I++VV + + + + ++F G +R E +W +F +AG+
Sbjct: 379 AIPSREEGGKVIVIDIVVEPSLGPVMFEAQTLMDMLMLVFTRGRQRSENDWRDLFMKAGF 200
Query: 1079 SDYRIIPVLGVRSIIEVY 1132
+DY+II +G R +IEVY
Sbjct: 199 TDYKIIKKMGARGVIEVY 146
Score = 95.9 bits (203), Expect(2) = 9e-024
Identities = 59/139 (42%), Positives = 75/139 (53%)
Frame = -2 / +3
Query: 1137 YG*TSIIDRTPKTGIIL*SLYPASEKILLHSCSSRSMPLMNMI*TSNMACISLCFMSDGP 958
Y *TS+ R P IIL*S+ PA K S S R PL+N + +M +
Sbjct: 141 YL*TSMTPRAPIFLIIL*SVNPAFMKRSRQSFSLR*RPLVNTSMSMSMRVWASNMTGPND 320
Query: 957 APTTMFIIITFPPASLGGIAFLQFFSIFTQSSWSQSCKTDFNSTASAGGMLSNMSPAINC 778
TT+ + ITFPP+S G+AFL + IFTQSS Q C T + TA A G + N SPA
Sbjct: 321 GSTTISMTITFPPSSREGMAFLHWVRIFTQSSSLQWCSTSLSITA*AFGTVWNRSPAT*L 500
Query: 777 TSV*VGAFATTWARSSTLH 721
T+ G F+ T RSST+H
Sbjct: 501 TTQSDGVFSMTLGRSSTVH 557
Score = 44.1 bits (90), Expect(2) = 2e-046
Identities = 17/36 (47%), Positives = 26/36 (72%)
Frame = +2 / -3
Query: 614 IKQSAEVFQGISSLVDVGGGIGTAAQAISKAFPHVK 721
+++ ++F+G+ SL D GG G A+AI+KA PHVK
Sbjct: 665 MRECHDLFKGLESLTDCCGGDGKTARAITKAHPHVK 558
Score = 35.0 bits (70), Expect(2) = 9e-024
Identities = 16/39 (41%), Positives = 18/39 (46%)
Frame = -2 / +1
Query: 744 WARSSTLHLTCGNAFEMAWAAVPMPPPTSTSELIPWKTS 628
W + LTCG A MA A P PP S + P K S
Sbjct: 535 WGDPARCTLTCGCALVMALAVFPSPPQQSVRDSSPLKRS 651
>gb|AV928262.1|AV928262 AV928262 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp.
vulgare cDNA clone basd27k15 3', mRNA sequence
Length = 728
Score = 143 bits (306), Expect(2) = 2e-045
Identities = 57/106 (53%), Positives = 77/106 (72%)
Frame = +2 / -2
Query: 671 GIGTAAQAISKAFPHVKCSVLDLAHVVAKAPTHTDVQFIAGDMFESIPPADAVLLKSVLH 850
G GT A+AI KAF H+KC+VLDL V+ K P+ V ++AGD+F ++PPA AV+LK VLH
Sbjct: 727 GDGTTARAIVKAFLHIKCNVLDLPKVIDKVPSDGVVNYVAGDLFHTVPPAQAVMLKLVLH 548
Query: 851 DWDHDDCVKILKNCKKAIPPREAGGKVIIINMVVGAGPSDMKHKEM 988
W +DC+ IL CKKAIP RE GGKVIII++V+G+ + + E+
Sbjct: 547 FWSDEDCINILAQCKKAIPSREMGGKVIIIDIVLGSSLATITETEL 410
Score = 94.5 bits (200), Expect(2) = 2e-025
Identities = 45/95 (47%), Positives = 57/95 (60%)
Frame = -2 / +3
Query: 954 PTTMFIIITFPPASLGGIAFLQFFSIFTQSSWSQSCKTDFNSTASAGGMLSNMSPAINCT 775
P TM ++ITFPP SL G+AFL + QSS Q C+T + TA AGG + SPA T
Sbjct: 444 PNTMSMMITFPPISLEGMAFLH*ARMLMQSSSLQKCRTSLSITA*AGGTVWKRSPAT*LT 623
Query: 774 SV*VGAFATTWARSSTLHLTCGNAFEMAWAAVPMP 670
+ +G + T+ RS+TLHL C A MA A VP P
Sbjct: 624 TPSLGTLSITFGRSNTLHLICRKALTMALAVVPSP 728
Score = 60.6 bits (126), Expect(2) = 2e-045
Identities = 23/38 (60%), Positives = 31/38 (81%)
Frame = +2 / -2
Query: 1025 GMERDEQEWSKIFSEAGYSDYRIIPVLGVRSIIEVYP* 1138
G +R+E+EWS +F +AG+SDY+II LG R +IEVYP*
Sbjct: 376 GRQRNEKEWSMLFMKAGFSDYKIIKKLGHRGVIEVYP* 263
Score = 42.3 bits (86), Expect(2) = 2e-025
Identities = 23/42 (54%), Positives = 27/42 (64%)
Frame = -2 / +3
Query: 1137 YG*TSIIDRTPKTGIIL*SLYPASEKILLHSCSSRSMPLMNM 1012
YG TS+ R P IIL*SL PA K +LHS S R PL++M
Sbjct: 264 YGYTSMTPR*PSFLIIL*SLNPAFIKSMLHSFSLRCRPLVHM 389
>gb|BF264626.3|BF264626 HV_CEa0009O22f Hordeum vulgare seedling green leaf EST library
HVcDNA0004 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEa0009O22f, mRNA sequence
Length = 877
Score = 167 bits (359), Expect(2) = 4e-045
Identities = 66/102 (64%), Positives = 84/102 (82%)
Frame = +2 / +1
Query: 773 DVQFIAGDMFESIPPADAVLLKSVLHDWDHDDCVKILKNCKKAIPPREAGGKVIIINMVV 952
+++F+AGDMFESIPPADAVLLK+VLHDW HDDCVKIL+ CK+A+P R AGGKVIII+M
Sbjct: 37 NLRFVAGDMFESIPPADAVLLKNVLHDWGHDDCVKILQRCKEAVPARSAGGKVIIIDMGR 216
Query: 953 GAGPSDMKHKEMQAIFDVYIMFINGMERDEQEWSKIFSEAGY 1078
G+ D K EM+A+ D++ M NG+ERDE EW +IFS+AG+
Sbjct: 217 GSLLGDKKIAEMEAMQDMFAMCTNGVERDESEWKRIFSDAGF 342
Score = 122 bits (262), Expect = 3e-027
Identities = 60/96 (62%), Positives = 67/96 (69%)
Frame = -2 / -3
Query: 1074 PASEKILLHSCSSRSMPLMNMI*TSNMACISLCFMSDGPAPTTMFIIITFPPASLGGIAF 895
PASEKIL HS SSRS PL+++ S MA IS F+S P + +IITFPPA L G A
Sbjct: 338 PASEKILFHSLSSRSTPLVHIANMSCMASISAIFLSPRRDPLPISMIITFPPALLAGTAS 159
Query: 894 LQFFSIFTQSSWSQSCKTDFNSTASAGGMLSNMSPA 787
LQ SI TQSSW QSCKT + TASAGGM SNMSPA
Sbjct: 158 LQR*SILTQSSWPQSCKTFLSRTASAGGMDSNMSPA 51
Score = 35.4 bits (71), Expect(2) = 4e-045
Identities = 13/19 (68%), Positives = 17/19 (89%)
Frame = +2 / +1
Query: 1082 DYRIIPVLGVRSIIEVYP* 1138
DY+I+PVLG S+IE+YP*
Sbjct: 349 DYKIMPVLGPLSVIEIYP* 405
>gb|BJ466406.1|BJ466406 BJ466406 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags31p18 3', mRNA sequence
Length = 613
Score = 182 bits (391), Expect = 5e-045
Identities = 72/149 (48%), Positives = 101/149 (67%)
Frame = +2 / -2
Query: 686 AQAISKAFPHVKCSVLDLAHVVAKAPTHTDVQFIAGDMFESIPPADAVLLKSVLHDWDHD 865
A+AI+KA PHVKC+VLDL V+ K P+ V ++AGD+F ++P A AV+LK VLH W D
Sbjct: 606 ARAITKAHPHVKCTVLDLPKVIEKTPSDCVVNYVAGDLFHTVPKAQAVMLKLVLHHWSDD 427
Query: 866 DCVKILKNCKKAIPPREAGGKVIIINMVVGAGPSDMKHKEMQAIFDVYIMFINGMERDEQ 1045
DCVKIL CK AIP RE GGKVI+I++VV + + + + ++F G +R E
Sbjct: 426 DCVKILTQCKNAIPSREEGGKVIVIDIVVEPSLGPVMFEAQTLMDMLMLVFTRGRQRSEN 247
Query: 1046 EWSKIFSEAGYSDYRIIPVLGVRSIIEVY 1132
+W +F +AG++DY+II +G R +IEVY
Sbjct: 246 DWRDLFMKAGFTDYKIIKKMGARGVIEVY 160
Score = 111 bits (237), Expect = 9e-024
Identities = 67/151 (44%), Positives = 83/151 (54%)
Frame = -2 / +2
Query: 1137 YG*TSIIDRTPKTGIIL*SLYPASEKILLHSCSSRSMPLMNMI*TSNMACISLCFMSDGP 958
Y *TS+ R P IIL*S+ PA K S S R PL+N + +M +
Sbjct: 155 YL*TSMTPRAPIFLIIL*SVNPAFMKRSRQSFSLR*RPLVNTSMSMSMRVWASNMTGPND 334
Query: 957 APTTMFIIITFPPASLGGIAFLQFFSIFTQSSWSQSCKTDFNSTASAGGMLSNMSPAINC 778
TT+ + ITFPP+S G+AFL + IFTQSS Q C T + TA A G + N SPA
Sbjct: 335 GSTTISMTITFPPSSREGMAFLHWVRIFTQSSSLQWCSTSLSITA*AFGTVWNRSPAT*L 514
Query: 777 TSV*VGAFATTWARSSTLHLTCGNAFEMAWA 685
T+ G F+ T RSST+HLTCG A MA A
Sbjct: 515 TTQSDGVFSMTLGRSSTVHLTCGCALVMALA 607
>gb|BI936373.1|BI936373 HVSMEa0019K09f Hordeum vulgare seedling shoot EST library
HVcDNA0001 (Cold stress) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEa0019K09f, mRNA sequence
Length = 651
Score = 122 bits (260), Expect(3) = 8e-045
Identities = 46/101 (45%), Positives = 69/101 (68%)
Frame = +2 / +1
Query: 404 TPLAAMVLDPTIVSPFSELGAWFQHELPDPCIFKHTHGRGIWELTKDDATFDALVNDGLA 583
T + AM+L+P +++ +G WF++ DP IF THG G+W++ DAT DAL+NDG+
Sbjct: 349 TSMMAMLLNPIMLTQCLGIGDWFKYWQSDPSIFDQTHGEGLWKMAHRDATLDALINDGMV 528
Query: 584 SDSQLIVDVAIKQSAEVFQGISSLVDVGGGIGTAAQAISKA 706
D + I+D+ +K+ EVF GI+SLVDVG G+G ++AI A
Sbjct: 529 CDRRFIMDIDVKECGEVFHGITSLVDVGSGLGAESEAICNA 651
Score = 93.6 bits (198), Expect(2) = 4e-027
Identities = 45/88 (51%), Positives = 56/88 (63%)
Frame = -1 / -1
Query: 682 RTDAPTDVDERAYPLEDLCALLDGNVDDELAVGSQPVVD*GVEGRVIFGQLPDASAVRVL 503
R +A TDVD+R YP+EDL AL D +V DE V PV+D V+G V G LP A AVR++
Sbjct: 627 RAEATTDVDQRGYPMEDLPALFDVDVHDEAPVADHPVIDQRVQGGVSVGHLPQALAVRLI 448
Query: 502 EDARVWELVLEPRAELGEGGDDGWIEHH 419
+DARV VLEP A+ G+ IE H
Sbjct: 447 KDARV*LPVLEPVADPEALGEHDGIEQH 364
Score = 86.3 bits (182), Expect(2) = 1e-022
Identities = 44/97 (45%), Positives = 55/97 (56%)
Frame = -2 / -2
Query: 705 AFEMAWAAVPMPPPTSTSELIPWKTSALCLMATSTMSWLSEANPSLTRASKVASSLVNSQ 526
A ++A + P P PTST+E+IPWKTS L + S M LS+ PSL ASKVAS
Sbjct: 650 ALQIASDSAPRPLPTSTNEVIPWKTSPHSLTSMSMMKRLSQTIPSLISASKVASRWAIFH 471
Query: 525 MPRPCVCLKMHGSGSSCWNHAPSSEKGETMVGSSTMA 415
P PCV KM GS N +P +M+G S+MA
Sbjct: 470 RPSPCV*SKMLGSDCQYLNQSPIPRHWVSMMGLSSMA 360
Score = 73.5 bits (154), Expect(3) = 8e-045
Identities = 29/53 (54%), Positives = 44/53 (83%)
Frame = +2 / +1
Query: 77 SLLDAQLELWHTTFAFMKSMALKSAIHLRIADAIHLHGGAASLSQILSKVHLH 235
+L DA+LELW +TF+++KSMALKSA+ LR+ADAI+ +GG +L I+++V +H
Sbjct: 37 ALADAELELWTSTFSYIKSMALKSALDLRLADAINHNGGVVTLYDIVTRVTIH 195
Score = 51.5 bits (106), Expect(2) = 4e-027
Identities = 27/48 (56%), Positives = 33/48 (68%)
Frame = -2 / -2
Query: 225 TLLSIWDRLAAPPWRWMASAIRRCIADLSAMDFMNAKVVCQSSSCASS 82
TL+++ + PP MASA RR ADLSAMDFM KV+ QSSS AS+
Sbjct: 185 TLVTMS*SVTTPPLWLMASASRRSRADLSAMDFM*EKVLVQSSSSASA 42
Score = 43.7 bits (89), Expect(2) = 1e-022
Identities = 23/65 (35%), Positives = 34/65 (52%)
Frame = -1 / -1
Query: 274 HAHQATEAGNSGRVEMDXXXXXXXXXXXAMEVDGIGNSEVYCGLERHGLHEREGGVPELE 95
+AH A ++ G V D A+ V+G+ +V L+RHGL+ REG PEL+
Sbjct: 234 NAHYAAQSVYLGVVYGDPGDYVVERDDTAIVVNGVSKPQVQGRLKRHGLYVREGAGPELK 55
Query: 94 LRIEQ 80
L + Q
Sbjct: 54 LGVSQ 40
Score = 24.4 bits (47), Expect(3) = 8e-045
Identities = 9/16 (56%), Positives = 10/16 (62%)
Frame = +2 / +1
Query: 329 DSEPVYTLTPVSRLLI 376
D E Y LTP RLL+
Sbjct: 286 DDETTYALTPAYRLLV 333
>gb|BI778623.2|BI778623 EBro07_SQ003_N10_R root, 3 week, reduced light, cv Optic, EBro07
Hordeum vulgare subsp. vulgare cDNA clone
EBro07_SQ003_N10 5', mRNA sequence
Length = 604
Score = 181 bits (389), Expect = 1e-044
Identities = 70/137 (51%), Positives = 97/137 (70%)
Frame = +2 / +2
Query: 545 DATFDALVNDGLASDSQLIVDVAIKQSAEVFQGISSLVDVGGGIGTAAQAISKAFPHVKC 724
D D++ N GLA+ L + +++ ++F+G+ SL D GG GT A+A+ KA+PH+KC
Sbjct: 89 DQELDSVCNQGLAAHDNLGIATILRECGDIFKGLDSLTDCCGGDGTTARALVKAYPHIKC 268
Query: 725 SVLDLAHVVAKAPTHTDVQFIAGDMFESIPPADAVLLKSVLHDWDHDDCVKILKNCKKAI 904
+VLDL VV KAP + ++AGD+F ++PP+ V+LK VLH W +DCVKIL C+KAI
Sbjct: 269 TVLDLPKVVEKAPADGVINYVAGDLFHTVPPSQVVMLKLVLHFWSDEDCVKILAQCRKAI 448
Query: 905 PPREAGGKVIIINMVVG 955
PPRE GGKVIII +VVG
Sbjct: 449 PPREEGGKVIIIEIVVG 499
Score = 116 bits (248), Expect = 3e-025
Identities = 55/109 (50%), Positives = 67/109 (61%)
Frame = -2 / -2
Query: 954 PTTMFIIITFPPASLGGIAFLQFFSIFTQSSWSQSCKTDFNSTASAGGMLSNMSPAINCT 775
PTT+ +IITFPP+S GG+AFL + IFTQSS Q C T + T GG + N SPA
Sbjct: 498 PTTISMIITFPPSSRGGMAFLHWARIFTQSSSLQKCSTSLSITT*DGGTVWNRSPAT*LM 319
Query: 774 SV*VGAFATTWARSSTLHLTCGNAFEMAWAAVPMPPPTSTSELIPWKTS 628
+ GAF+TT+ RS+T+HL CG A A A VP PP S E P K S
Sbjct: 318 TPSAGAFSTTFGRSNTVHLMCG*ALTRALAVVPSPPQQSVRESSPLKMS 172
>gb|CD662493.1|CD662493 UCRHV18_01ch06_b1 Drought-stressed Dicktoo barley epidermis cDNA
library Hordeum vulgare subsp. vulgare cDNA clone
UCRHV18_01ch06, mRNA sequence
Length = 865
Score = 171 bits (367), Expect(2) = 2e-044
Identities = 66/140 (47%), Positives = 97/140 (69%)
Frame = +2 / -1
Query: 569 NDGLASDSQLIVDVAIKQSAEVFQGISSLVDVGGGIGTAAQAISKAFPHVKCSVLDLAHV 748
++ LA+ L + +++ ++F+G+ SL D GG GT A+AI KAFPH+KC+VLDL V
Sbjct: 862 HEALAAHDHLGIGTILRECHDLFKGVQSLTDCCGGDGTTARAIVKAFPHIKCNVLDLPKV 683
Query: 749 VAKAPTHTDVQFIAGDMFESIPPADAVLLKSVLHDWDHDDCVKILKNCKKAIPPREAGGK 928
+ K P+ V ++AGD+F +IPPA ++LK VLH W +DC+ IL CKKAIP RE GGK
Sbjct: 682 IEKVPSDGIVNYVAGDLFHAIPPAQVLMLKLVLHFWSDEDCINILAQCKKAIPSREMGGK 503
Query: 929 VIIINMVVGAGPSDMKHKEM 988
VI+I++VVG+ +M ++
Sbjct: 502 VIVIDIVVGSSSKEMLETQL 443
Score = 105 bits (225), Expect(2) = 1e-028
Identities = 51/109 (46%), Positives = 62/109 (56%)
Frame = -2 / +3
Query: 954 PTTMFIIITFPPASLGGIAFLQFFSIFTQSSWSQSCKTDFNSTASAGGMLSNMSPAINCT 775
PTT+ + ITFPP S G+AFL I QSS Q C+T + AGG+ N SPA T
Sbjct: 477 PTTISMTITFPPISRDGMAFLH*ARILMQSSSLQKCRTSLSMRT*AGGIAWNRSPAT*LT 656
Query: 774 SV*VGAFATTWARSSTLHLTCGNAFEMAWAAVPMPPPTSTSELIPWKTS 628
+G F+ T+ RS+TLHL CG A MA A VP PP S S+ P S
Sbjct: 657 IPSLGTFSITFGRSNTLHLICGKALTMALAVVPSPPQQSVSDWTPLNKS 803
Score = 41.4 bits (84), Expect(2) = 1e-028
Identities = 23/44 (52%), Positives = 27/44 (61%)
Frame = -2 / +3
Query: 1146 TNGYG*TSIIDRTPKTGIIL*SLYPASEKILLHSCSSRSMPLMN 1015
T YG*TS+ R P IL* L PA KI+L S SSR PL++
Sbjct: 288 TQSYG*TSMTPRGPSFLTIL*PLNPAFVKIVLQSFSSR*RPLVH 419
Score = 29.5 bits (58), Expect(2) = 2e-044
Identities = 15/41 (36%), Positives = 24/41 (58%)
Frame = +3 / -2
Query: 1032 NEMSRSGARFSPKLDIAITE*YRS*VFGL*SRSIHNHLCKM 1154
NEM +GA+ K D+A + R+ + SRSIH +C++
Sbjct: 402 NEMKMTGAQSLQKQDLAAIKLSRNWDLEVSSRSIHKIVCQV 280
>gb|BQ662115.1|BQ662115 HR01K01u HR Hordeum vulgare subsp. vulgare cDNA clone HR01K01
3-PRIME, mRNA sequence
Length = 528
Score = 139 bits (298), Expect(2) = 2e-044
Identities = 54/100 (54%), Positives = 74/100 (74%)
Frame = +2 / -2
Query: 689 QAISKAFPHVKCSVLDLAHVVAKAPTHTDVQFIAGDMFESIPPADAVLLKSVLHDWDHDD 868
+AI KAFPH+KC+VLDL V+ K P+ V ++AGD+F ++PPA AV+LK VLH W +D
Sbjct: 527 RAIVKAFPHIKCNVLDLPKVIDKVPSDGVVNYVAGDLFHTVPPAQAVMLKLVLHFWSDED 348
Query: 869 CVKILKNCKKAIPPREAGGKVIIINMVVGAGPSDMKHKEM 988
C+ IL CKKAIP RE GGKVIII++V+G+ + + E+
Sbjct: 347 CINILAQCKKAIPSREMGGKVIIIDIVLGSSLATITETEL 228
Score = 89.5 bits (189), Expect(2) = 5e-024
Identities = 42/88 (47%), Positives = 54/88 (61%)
Frame = -2 / +1
Query: 954 PTTMFIIITFPPASLGGIAFLQFFSIFTQSSWSQSCKTDFNSTASAGGMLSNMSPAINCT 775
P TM ++ITFPP SL G+AFL + QSS Q C+T + TA AGG + SPA T
Sbjct: 262 PNTMSMMITFPPISLEGMAFLH*ARMLMQSSSLQKCRTSLSITA*AGGTVWKRSPAT*LT 441
Query: 774 SV*VGAFATTWARSSTLHLTCGNAFEMA 691
+ +G + T+ RS+TLHL CG A MA
Sbjct: 442 TPSLGTLSITFGRSNTLHLICGKALTMA 525
Score = 60.6 bits (126), Expect(2) = 2e-044
Identities = 23/38 (60%), Positives = 31/38 (81%)
Frame = +2 / -2
Query: 1025 GMERDEQEWSKIFSEAGYSDYRIIPVLGVRSIIEVYP* 1138
G +R+E+EWS +F +AG+SDY+II LG R +IEVYP*
Sbjct: 194 GRQRNEKEWSMLFMKAGFSDYKIIKKLGHRGVIEVYP* 81
Score = 42.3 bits (86), Expect(2) = 5e-024
Identities = 23/42 (54%), Positives = 27/42 (64%)
Frame = -2 / +1
Query: 1137 YG*TSIIDRTPKTGIIL*SLYPASEKILLHSCSSRSMPLMNM 1012
YG TS+ R P IIL*SL PA K +LHS S R PL++M
Sbjct: 82 YGYTSMTPR*PSFLIIL*SLNPAFIKSMLHSFSLRCRPLVHM 207
>gb|AV916317.1|AV916317 AV916317 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags12j23 5', mRNA sequence
Length = 585
Score = 179 bits (385), Expect = 4e-044
Identities = 69/133 (51%), Positives = 96/133 (72%)
Frame = +2 / +2
Query: 557 DALVNDGLASDSQLIVDVAIKQSAEVFQGISSLVDVGGGIGTAAQAISKAFPHVKCSVLD 736
D++ N GLA+ L + +++ ++F+G+ SL D GG GT A+A+ KA+PH+KC+VLD
Sbjct: 77 DSVCNQGLAAHDNLGIATILRECGDIFKGLDSLTDCCGGDGTTARALVKAYPHIKCTVLD 256
Query: 737 LAHVVAKAPTHTDVQFIAGDMFESIPPADAVLLKSVLHDWDHDDCVKILKNCKKAIPPRE 916
L VV KAP + ++AGD+F ++PP+ V+LK VLH W +DCVKIL C+KAIPPRE
Sbjct: 257 LPKVVEKAPADGVINYVAGDLFHTVPPSQVVMLKLVLHFWSDEDCVKILAQCRKAIPPRE 436
Query: 917 AGGKVIIINMVVG 955
GGKVIII +VVG
Sbjct: 437 EGGKVIIIEIVVG 475
Score = 116 bits (248), Expect = 3e-025
Identities = 55/109 (50%), Positives = 67/109 (61%)
Frame = -2 / -1
Query: 954 PTTMFIIITFPPASLGGIAFLQFFSIFTQSSWSQSCKTDFNSTASAGGMLSNMSPAINCT 775
PTT+ +IITFPP+S GG+AFL + IFTQSS Q C T + T GG + N SPA
Sbjct: 474 PTTISMIITFPPSSRGGMAFLHWARIFTQSSSLQKCSTSLSITT*DGGTVWNRSPAT*LM 295
Query: 774 SV*VGAFATTWARSSTLHLTCGNAFEMAWAAVPMPPPTSTSELIPWKTS 628
+ GAF+TT+ RS+T+HL CG A A A VP PP S E P K S
Sbjct: 294 TPSAGAFSTTFGRSNTVHLMCG*ALTRALAVVPSPPQQSVRESSPLKMS 148
>gb|BF253847.2|BF253847 HVSMEf0002E15f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEf0002E15f, mRNA sequence
Length = 822
Score = 177 bits (381), Expect = 1e-043
Identities = 68/137 (49%), Positives = 98/137 (71%)
Frame = +2 / +1
Query: 545 DATFDALVNDGLASDSQLIVDVAIKQSAEVFQGISSLVDVGGGIGTAAQAISKAFPHVKC 724
D FDA+ N+GLA+ L + +++ ++F+G+ SL D GG GT A+A+ KA+PH+KC
Sbjct: 37 DEEFDAVANEGLAAHDNLGIATILRECGDIFKGLESLTDCCGGDGTTARALVKAYPHIKC 216
Query: 725 SVLDLAHVVAKAPTHTDVQFIAGDMFESIPPADAVLLKSVLHDWDHDDCVKILKNCKKAI 904
+VLDL V+ KAP V ++AGD+F ++P + AV+LK VLH W +DCVKIL CKKAI
Sbjct: 217 TVLDLPKVIDKAPKDGVVNYVAGDLFHTVPSSQAVMLKLVLHFWSDEDCVKILTQCKKAI 396
Query: 905 PPREAGGKVIIINMVVG 955
P + GGK+III++V+G
Sbjct: 397 PAHDEGGKIIIIDIVIG 447
Score = 106 bits (226), Expect = 3e-022
Identities = 51/109 (46%), Positives = 63/109 (57%)
Frame = -2 / -2
Query: 954 PTTMFIIITFPPASLGGIAFLQFFSIFTQSSWSQSCKTDFNSTASAGGMLSNMSPAINCT 775
P TM +II FPP+S G+AFL + IFTQSS Q C T + TA G + N SPA T
Sbjct: 446 PITMSMIIIFPPSSCAGMAFLHWVKIFTQSSSLQKCSTSLSMTA*EDGTVWNRSPAT*LT 267
Query: 774 SV*VGAFATTWARSSTLHLTCGNAFEMAWAAVPMPPPTSTSELIPWKTS 628
+ GA + T+ RS+T+HL CG A A A VP PP S + P K S
Sbjct: 266 TPSFGALSITFGRSNTVHLMCG*ALTRALAVVPSPPQQSVRDSSPLKMS 120
>gb|AV931831.1|AV931831 AV931831 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp.
vulgare cDNA clone basd26g01 3', mRNA sequence
Length = 680
Score = 132 bits (283), Expect(2) = 2e-043
Identities = 49/94 (52%), Positives = 68/94 (72%)
Frame = +2 / -3
Query: 707 FPHVKCSVLDLAHVVAKAPTHTDVQFIAGDMFESIPPADAVLLKSVLHDWDHDDCVKILK 886
FPH+KC+VLDL V+ K P+ V ++AGD+F +IPPA ++LK VLH W +DC+ IL
Sbjct: 678 FPHIKCNVLDLPKVIEKVPSDGIVNYVAGDLFHAIPPAQVLMLKLVLHFWSDEDCINILS 499
Query: 887 NCKKAIPPREAGGKVIIINMVVGAGPSDMKHKEM 988
CKKAIP RE GGKVI+I++VVG+ ++ E+
Sbjct: 498 QCKKAIPSREMGGKVIVIDIVVGSSSKEILETEL 397
Score = 85.4 bits (180), Expect(2) = 3e-024
Identities = 41/82 (50%), Positives = 49/82 (59%)
Frame = -2 / +2
Query: 954 PTTMFIIITFPPASLGGIAFLQFFSIFTQSSWSQSCKTDFNSTASAGGMLSNMSPAINCT 775
PTT+ I ITFPP S G+AFL I QSS Q C+T + AGGM N SPA T
Sbjct: 431 PTTISITITFPPISRDGMAFLH*DRILMQSSSLQKCRTSLSMRT*AGGMAWNRSPAT*LT 610
Query: 774 SV*VGAFATTWARSSTLHLTCG 709
+G F+ T+ RS+TLHL CG
Sbjct: 611 IPSLGTFSITFGRSNTLHLICG 676
Score = 64.8 bits (135), Expect(2) = 2e-043
Identities = 25/41 (60%), Positives = 32/41 (78%)
Frame = +2 / -3
Query: 1025 GMERDEQEWSKIFSEAGYSDYRIIPVLGVRSIIEVYP*PFV 1147
G +RDE +WS IF++AG+SDY+I+ LG R IIEVYP* V
Sbjct: 363 GRQRDENDWSTIFTKAGFSDYKIVKKLGARGIIEVYP*DCV 241
Score = 47.3 bits (97), Expect(2) = 3e-024
Identities = 26/50 (52%), Positives = 30/50 (60%)
Frame = -2 / +2
Query: 1164 IYEPSYTNGYG*TSIIDRTPKTGIIL*SLYPASEKILLHSCSSRSMPLMN 1015
I E T YG*TS+I R P IL*SL PA KI+L S SSR P ++
Sbjct: 224 IIEALGTQSYG*TSMIPRAPSFLTIL*SLNPAFVKIVLQSFSSRCRPFVH 373
>gb|AV928022.1|AV928022 AV928022 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp.
vulgare cDNA clone basd13k11 3', mRNA sequence
Length = 667
Score = 132 bits (283), Expect(2) = 2e-043
Identities = 49/94 (52%), Positives = 68/94 (72%)
Frame = +2 / -1
Query: 707 FPHVKCSVLDLAHVVAKAPTHTDVQFIAGDMFESIPPADAVLLKSVLHDWDHDDCVKILK 886
FPH+KC+VLDL V+ K P+ V ++AGD+F +IPPA ++LK VLH W +DC+ IL
Sbjct: 667 FPHIKCNVLDLPKVIEKVPSDGIVNYVAGDLFHAIPPAQVLMLKLVLHFWSDEDCINILS 488
Query: 887 NCKKAIPPREAGGKVIIINMVVGAGPSDMKHKEM 988
CKKAIP RE GGKVI+I++VVG+ ++ E+
Sbjct: 487 QCKKAIPSREMGGKVIVIDIVVGSSSKEILETEL 386
Score = 85.4 bits (180), Expect(2) = 3e-024
Identities = 41/82 (50%), Positives = 49/82 (59%)
Frame = -2 / +3
Query: 954 PTTMFIIITFPPASLGGIAFLQFFSIFTQSSWSQSCKTDFNSTASAGGMLSNMSPAINCT 775
PTT+ I ITFPP S G+AFL I QSS Q C+T + AGGM N SPA T
Sbjct: 420 PTTISITITFPPISRDGMAFLH*DRILMQSSSLQKCRTSLSMRT*AGGMAWNRSPAT*LT 599
Query: 774 SV*VGAFATTWARSSTLHLTCG 709
+G F+ T+ RS+TLHL CG
Sbjct: 600 IPSLGTFSITFGRSNTLHLICG 665
Score = 64.8 bits (135), Expect(2) = 2e-043
Identities = 25/41 (60%), Positives = 32/41 (78%)
Frame = +2 / -1
Query: 1025 GMERDEQEWSKIFSEAGYSDYRIIPVLGVRSIIEVYP*PFV 1147
G +RDE +WS IF++AG+SDY+I+ LG R IIEVYP* V
Sbjct: 352 GRQRDENDWSTIFTKAGFSDYKIVKKLGARGIIEVYP*DCV 230
Score = 47.3 bits (97), Expect(2) = 3e-024
Identities = 26/50 (52%), Positives = 30/50 (60%)
Frame = -2 / +3
Query: 1164 IYEPSYTNGYG*TSIIDRTPKTGIIL*SLYPASEKILLHSCSSRSMPLMN 1015
I E T YG*TS+I R P IL*SL PA KI+L S SSR P ++
Sbjct: 213 IIEALGTQSYG*TSMIPRAPSFLTIL*SLNPAFVKIVLQSFSSRCRPFVH 362
>gb|AV929439.1|AV929439 AV929439 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp.
vulgare cDNA clone basd14d20 3', mRNA sequence
Length = 670
Score = 136 bits (291), Expect(2) = 2e-043
Identities = 52/96 (54%), Positives = 71/96 (73%)
Frame = +2 / -3
Query: 701 KAFPHVKCSVLDLAHVVAKAPTHTDVQFIAGDMFESIPPADAVLLKSVLHDWDHDDCVKI 880
KAFPH+KC+VLDL V+ K P+ V ++AGD+F ++PPA AV+LK VLH W +DC+ I
Sbjct: 668 KAFPHIKCNVLDLPKVIDKVPSDGVVNYVAGDLFHTVPPAQAVMLKLVLHFWSDEDCINI 489
Query: 881 LKNCKKAIPPREAGGKVIIINMVVGAGPSDMKHKEM 988
L CKKAIP RE GGKVIII++V+G+ + + E+
Sbjct: 488 LAQCKKAIPSREMGGKVIIIDIVLGSSLATITETEL 381
Score = 85.8 bits (181), Expect(2) = 6e-023
Identities = 40/84 (47%), Positives = 52/84 (61%)
Frame = -2 / +1
Query: 954 PTTMFIIITFPPASLGGIAFLQFFSIFTQSSWSQSCKTDFNSTASAGGMLSNMSPAINCT 775
P TM ++ITFPP SL G+AFL + QSS Q C+T + TA AGG + SPA T
Sbjct: 415 PNTMSMMITFPPISLEGMAFLH*ARMLMQSSSLQKCRTSLSITA*AGGTVWKRSPAT*LT 594
Query: 774 SV*VGAFATTWARSSTLHLTCGNA 703
+ +G + T+ RS+TLHL CG A
Sbjct: 595 TPSLGTLSITFGRSNTLHLICGKA 666
Score = 60.6 bits (126), Expect(2) = 2e-043
Identities = 23/38 (60%), Positives = 31/38 (81%)
Frame = +2 / -3
Query: 1025 GMERDEQEWSKIFSEAGYSDYRIIPVLGVRSIIEVYP* 1138
G +R+E+EWS +F +AG+SDY+II LG R +IEVYP*
Sbjct: 347 GRQRNEKEWSMLFMKAGFSDYKIIKKLGHRGVIEVYP* 234
Score = 42.3 bits (86), Expect(2) = 6e-023
Identities = 23/42 (54%), Positives = 27/42 (64%)
Frame = -2 / +1
Query: 1137 YG*TSIIDRTPKTGIIL*SLYPASEKILLHSCSSRSMPLMNM 1012
YG TS+ R P IIL*SL PA K +LHS S R PL++M
Sbjct: 235 YGYTSMTPR*PSFLIIL*SLNPAFIKSMLHSFSLRCRPLVHM 360
>gb|BQ659524.1|BQ659524 HE01L03u HE Hordeum vulgare subsp. vulgare cDNA clone HE01L03
3-PRIME, mRNA sequence
Length = 533
Score = 160 bits (345), Expect(2) = 3e-043
Identities = 65/95 (68%), Positives = 78/95 (82%)
Frame = +2 / -3
Query: 794 DMFESIPPADAVLLKSVLHDWDHDDCVKILKNCKKAIPPREAGGKVIIINMVVGAGPSDM 973
DMFESIPPADAVLLK+VLHDW HDDCVKIL+ CK+AIP R AGGKVIII+MV G+ D
Sbjct: 531 DMFESIPPADAVLLKNVLHDWGHDDCVKILQRCKEAIPARSAGGKVIIIDMVRGSLLGDK 352
Query: 974 KHKEMQAIFDVYIMFINGMERDEQEWSKIFSEAGY 1078
K EM+A+ D++ M NG+ERDE EW +IFS+AG+
Sbjct: 351 KIAEMEAMQDMFAMCTNGVERDESEWKRIFSDAGF 247
Score = 121 bits (259), Expect = 8e-027
Identities = 59/94 (62%), Positives = 67/94 (71%)
Frame = -2 / +2
Query: 1074 PASEKILLHSCSSRSMPLMNMI*TSNMACISLCFMSDGPAPTTMFIIITFPPASLGGIAF 895
PASEKIL HS SSRS PL+++ S MA IS F+S P T+ +IITFPPA L G+A
Sbjct: 251 PASEKILFHSLSSRSTPLVHIANMSCMASISAIFLSPRRDPLTISMIITFPPALLAGMAS 430
Query: 894 LQFFSIFTQSSWSQSCKTDFNSTASAGGMLSNMS 793
LQ SI TQSSW QSCKT + TASAGGM SNMS
Sbjct: 431 LQR*SILTQSSWPQSCKTFLSRTASAGGMDSNMS 532
Score = 35.4 bits (71), Expect(2) = 3e-043
Identities = 13/19 (68%), Positives = 17/19 (89%)
Frame = +2 / -3
Query: 1082 DYRIIPVLGVRSIIEVYP* 1138
DY+I+PVLG S+IE+YP*
Sbjct: 240 DYKIMPVLGPLSVIEIYP* 184
>gb|CB879142.1|CB879142 HP11B09T HP Hordeum vulgare subsp. vulgare cDNA clone HP11B09
5-PRIME, mRNA sequence
Length = 562
Score = 175 bits (377), Expect = 4e-043
Identities = 69/148 (46%), Positives = 100/148 (67%)
Frame = +2 / +2
Query: 545 DATFDALVNDGLASDSQLIVDVAIKQSAEVFQGISSLVDVGGGIGTAAQAISKAFPHVKC 724
D D L ++ LA+ L + +++ ++F+G+ SL D GG GT A+AI KAFPH+KC
Sbjct: 101 DPESDELFHEALAAHDHLGIGTILRECHDLFKGVQSLTDCCGGDGTTARAIVKAFPHIKC 280
Query: 725 SVLDLAHVVAKAPTHTDVQFIAGDMFESIPPADAVLLKSVLHDWDHDDCVKILKNCKKAI 904
+VLDL V+ K P+ V ++AGD+F +IPPA ++LK VLH W +DC+ IL CKKAI
Sbjct: 281 NVLDLPKVIEKVPSDGIVNYVAGDLFHAIPPAQVLMLKLVLHFWSDEDCINILAQCKKAI 460
Query: 905 PPREAGGKVIIINMVVGAGPSDMKHKEM 988
P RE GGKVI+I++VVG+ +M ++
Sbjct: 461 PSREMGGKVIVIDIVVGSSSKEMLETQL 544
Score = 105 bits (225), Expect = 4e-022
Identities = 51/109 (46%), Positives = 62/109 (56%)
Frame = -2 / -2
Query: 954 PTTMFIIITFPPASLGGIAFLQFFSIFTQSSWSQSCKTDFNSTASAGGMLSNMSPAINCT 775
PTT+ + ITFPP S G+AFL I QSS Q C+T + AGG+ N SPA T
Sbjct: 510 PTTISMTITFPPISRDGMAFLH*ARILMQSSSLQKCRTSLSMRT*AGGIAWNRSPAT*LT 331
Query: 774 SV*VGAFATTWARSSTLHLTCGNAFEMAWAAVPMPPPTSTSELIPWKTS 628
+G F+ T+ RS+TLHL CG A MA A VP PP S S+ P S
Sbjct: 330 IPSLGTFSITFGRSNTLHLICGKALTMALAVVPSPPQQSVSDWTPLNKS 184
>gb|AV930527.1|AV930527 AV930527 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp.
vulgare cDNA clone basd22o21 3', mRNA sequence
Length = 665
Score = 129 bits (277), Expect(2) = 1e-042
Identities = 48/93 (51%), Positives = 67/93 (72%)
Frame = +2 / -3
Query: 710 PHVKCSVLDLAHVVAKAPTHTDVQFIAGDMFESIPPADAVLLKSVLHDWDHDDCVKILKN 889
PH+KC+VLDL V+ K P+ V ++AGD+F +IPPA ++LK VLH W +DC+ IL
Sbjct: 663 PHIKCNVLDLPKVIEKVPSDGIVNYVAGDLFHAIPPAQVLMLKLVLHFWSDEDCINILSQ 484
Query: 890 CKKAIPPREAGGKVIIINMVVGAGPSDMKHKEM 988
CKKAIP RE GGKVI+I++VVG+ ++ E+
Sbjct: 483 CKKAIPSREMGGKVIVIDIVVGSSSKEILETEL 385
Score = 85.4 bits (180), Expect(2) = 3e-024
Identities = 41/82 (50%), Positives = 49/82 (59%)
Frame = -2 / +2
Query: 954 PTTMFIIITFPPASLGGIAFLQFFSIFTQSSWSQSCKTDFNSTASAGGMLSNMSPAINCT 775
PTT+ I ITFPP S G+AFL I QSS Q C+T + AGGM N SPA T
Sbjct: 419 PTTISITITFPPISRDGMAFLH*DRILMQSSSLQKCRTSLSMRT*AGGMAWNRSPAT*LT 598
Query: 774 SV*VGAFATTWARSSTLHLTCG 709
+G F+ T+ RS+TLHL CG
Sbjct: 599 IPSLGTFSITFGRSNTLHLICG 664
Score = 64.8 bits (135), Expect(2) = 1e-042
Identities = 25/41 (60%), Positives = 32/41 (78%)
Frame = +2 / -3
Query: 1025 GMERDEQEWSKIFSEAGYSDYRIIPVLGVRSIIEVYP*PFV 1147
G +RDE +WS IF++AG+SDY+I+ LG R IIEVYP* V
Sbjct: 351 GRQRDENDWSTIFTKAGFSDYKIVKKLGARGIIEVYP*DCV 229
Score = 47.3 bits (97), Expect(2) = 3e-024
Identities = 26/50 (52%), Positives = 30/50 (60%)
Frame = -2 / +2
Query: 1164 IYEPSYTNGYG*TSIIDRTPKTGIIL*SLYPASEKILLHSCSSRSMPLMN 1015
I E T YG*TS+I R P IL*SL PA KI+L S SSR P ++
Sbjct: 212 IIEALGTQSYG*TSMIPRAPSFLTIL*SLNPAFVKIVLQSFSSRCRPFVH 361
>gb|AV921748.1|AV921748 AV921748 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags12j23 3', mRNA sequence
Length = 659
Score = 133 bits (285), Expect(2) = 1e-042
Identities = 50/83 (60%), Positives = 64/83 (77%)
Frame = +2 / -1
Query: 707 FPHVKCSVLDLAHVVAKAPTHTDVQFIAGDMFESIPPADAVLLKSVLHDWDHDDCVKILK 886
+PH+KC+VLDL VV KAP + ++AGD+F ++PP+ V+LK VLH W +DCVKIL
Sbjct: 659 YPHIKCTVLDLPKVVEKAPADGVINYVAGDLFHTVPPSQVVMLKLVLHFWSDEDCVKILA 480
Query: 887 NCKKAIPPREAGGKVIIINMVVG 955
C+KAIPPRE GGKVIII +VVG
Sbjct: 479 QCRKAIPPREEGGKVIIIEIVVG 411
Score = 96.8 bits (205), Expect(2) = 1e-022
Identities = 43/82 (52%), Positives = 55/82 (67%)
Frame = -2 / +1
Query: 954 PTTMFIIITFPPASLGGIAFLQFFSIFTQSSWSQSCKTDFNSTASAGGMLSNMSPAINCT 775
PTT+ +IITFPP+S GG+AFL + IFTQSS Q C T + T GG + N SPA
Sbjct: 412 PTTISMIITFPPSSRGGMAFLHWARIFTQSSSLQKCSTSLSITT*DGGTVWNRSPAT*LM 591
Query: 774 SV*VGAFATTWARSSTLHLTCG 709
+ GAF+TT+ RS+T+HL CG
Sbjct: 592 TPSAGAFSTTFGRSNTVHLMCG 657
Score = 61.1 bits (127), Expect(2) = 1e-042
Identities = 22/41 (53%), Positives = 31/41 (75%)
Frame = +2 / -1
Query: 1025 GMERDEQEWSKIFSEAGYSDYRIIPVLGVRSIIEVYP*PFV 1147
G +RDE W ++F +AG++DY+I+ LG RS+IEVYP* V
Sbjct: 341 GGQRDENHWCELFKKAGFTDYKIVKKLGARSVIEVYP*DIV 219
Score = 30.4 bits (60), Expect(2) = 1e-022
Identities = 15/26 (57%), Positives = 17/26 (65%)
Frame = -2 / +1
Query: 1146 TNGYG*TSIIDRTPKTGIIL*SLYPA 1069
T YG*TS+ DR P IL*S+ PA
Sbjct: 220 TISYG*TSMTDRAPNFFTIL*SVNPA 297
>gb|BJ468231.1|BJ468231 BJ468231 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags37m03 3', mRNA sequence
Length = 626
Score = 133 bits (285), Expect(2) = 1e-042
Identities = 50/83 (60%), Positives = 64/83 (77%)
Frame = +2 / -3
Query: 707 FPHVKCSVLDLAHVVAKAPTHTDVQFIAGDMFESIPPADAVLLKSVLHDWDHDDCVKILK 886
+PH+KC+VLDL VV KAP + ++AGD+F ++PP+ V+LK VLH W +DCVKIL
Sbjct: 624 YPHIKCTVLDLPKVVEKAPADGVINYVAGDLFHTVPPSQVVMLKLVLHFWSDEDCVKILA 445
Query: 887 NCKKAIPPREAGGKVIIINMVVG 955
C+KAIPPRE GGKVIII +VVG
Sbjct: 444 QCRKAIPPREEGGKVIIIEIVVG 376
Score = 96.8 bits (205), Expect(2) = 1e-022
Identities = 43/82 (52%), Positives = 55/82 (67%)
Frame = -2 / +2
Query: 954 PTTMFIIITFPPASLGGIAFLQFFSIFTQSSWSQSCKTDFNSTASAGGMLSNMSPAINCT 775
PTT+ +IITFPP+S GG+AFL + IFTQSS Q C T + T GG + N SPA
Sbjct: 377 PTTISMIITFPPSSRGGMAFLHWARIFTQSSSLQKCSTSLSITT*DGGTVWNRSPAT*LM 556
Query: 774 SV*VGAFATTWARSSTLHLTCG 709
+ GAF+TT+ RS+T+HL CG
Sbjct: 557 TPSAGAFSTTFGRSNTVHLMCG 622
Score = 61.1 bits (127), Expect(2) = 1e-042
Identities = 22/41 (53%), Positives = 31/41 (75%)
Frame = +2 / -3
Query: 1025 GMERDEQEWSKIFSEAGYSDYRIIPVLGVRSIIEVYP*PFV 1147
G +RDE W ++F +AG++DY+I+ LG RS+IEVYP* V
Sbjct: 306 GGQRDENHWCELFKKAGFTDYKIVKKLGARSVIEVYP*DIV 184
Score = 30.4 bits (60), Expect(2) = 1e-022
Identities = 15/26 (57%), Positives = 17/26 (65%)
Frame = -2 / +2
Query: 1146 TNGYG*TSIIDRTPKTGIIL*SLYPA 1069
T YG*TS+ DR P IL*S+ PA
Sbjct: 185 TISYG*TSMTDRAPNFFTIL*SVNPA 262
>gb|BJ468058.1|BJ468058 BJ468058 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags30o16 3', mRNA sequence
Length = 674
Score = 174 bits (374), Expect = 1e-042
Identities = 69/147 (46%), Positives = 97/147 (65%)
Frame = +2 / -2
Query: 692 AISKAFPHVKCSVLDLAHVVAKAPTHTDVQFIAGDMFESIPPADAVLLKSVLHDWDHDDC 871
AI+KA PH+KC+VLDL V+ K V ++ GD+F ++P A AV+LK VLH W DDC
Sbjct: 673 AITKAHPHIKCTVLDLPKVIDKTSADGIVNYVGGDLFHTVPKAQAVMLKLVLHHWSDDDC 494
Query: 872 VKILKNCKKAIPPREAGGKVIIINMVVGAGPSDMKHKEMQAIFDVYIMFINGMERDEQEW 1051
VKIL CK AIP RE GGKVI+I++VV + + + + ++F G +R E +W
Sbjct: 493 VKILTQCKNAIPSREEGGKVIVIDIVVEPSLGPVMFEAQTLMDILMLVFTRGRQRSESDW 314
Query: 1052 SKIFSEAGYSDYRIIPVLGVRSIIEVY 1132
+F++AG+SDY+I+ LG R +IEVY
Sbjct: 313 HVLFTKAGFSDYKIVKRLGARGVIEVY 233
>gb|CB879386.1|CB879386 HP02A07w HP Hordeum vulgare subsp. vulgare cDNA clone HP02A07
3-PRIME, mRNA sequence
Length = 539
Score = 172 bits (370), Expect = 4e-042
Identities = 67/142 (47%), Positives = 98/142 (69%)
Frame = +2 / -2
Query: 563 LVNDGLASDSQLIVDVAIKQSAEVFQGISSLVDVGGGIGTAAQAISKAFPHVKCSVLDLA 742
L ++ LA+ L + +++ ++F+G+ SL D GG GT A+AI KAFPH+KC+VLDL
Sbjct: 538 LFHEALAAHDHLGIGTILRECHDLFKGVQSLTDCCGGDGTTARAIVKAFPHIKCNVLDLP 359
Query: 743 HVVAKAPTHTDVQFIAGDMFESIPPADAVLLKSVLHDWDHDDCVKILKNCKKAIPPREAG 922
V+ K P+ V ++AGD+F +IPPA ++LK VLH W +DC+ IL CKKAIP RE G
Sbjct: 358 KVIEKVPSDGIVNYVAGDLFHAIPPAQVLMLKLVLHFWSDEDCINILAQCKKAIPSREMG 179
Query: 923 GKVIIINMVVGAGPSDMKHKEM 988
GKVI+I++VVG+ +M ++
Sbjct: 178 GKVIVIDIVVGSSSKEMLETQL 113
Score = 105 bits (225), Expect(2) = 1e-024
Identities = 51/109 (46%), Positives = 62/109 (56%)
Frame = -2 / +3
Query: 954 PTTMFIIITFPPASLGGIAFLQFFSIFTQSSWSQSCKTDFNSTASAGGMLSNMSPAINCT 775
PTT+ + ITFPP S G+AFL I QSS Q C+T + AGG+ N SPA T
Sbjct: 147 PTTISMTITFPPISRDGMAFLH*ARILMQSSSLQKCRTSLSMRT*AGGIAWNRSPAT*LT 326
Query: 774 SV*VGAFATTWARSSTLHLTCGNAFEMAWAAVPMPPPTSTSELIPWKTS 628
+G F+ T+ RS+TLHL CG A MA A VP PP S S+ P S
Sbjct: 327 IPSLGTFSITFGRSNTLHLICGKALTMALAVVPSPPQQSVSDWTPLNKS 473
Score = 27.6 bits (54), Expect(2) = 1e-024
Identities = 15/26 (57%), Positives = 18/26 (69%)
Frame = -2 / +3
Query: 1092 IL*SLYPASEKILLHSCSSRSMPLMN 1015
IL* L PA KI+L S SSR PL++
Sbjct: 12 IL*PLNPAFVKIVLQSFSSR*RPLVH 89
>gb|BQ658222.1|BQ658222 HA05D15u HA Hordeum vulgare subsp. vulgare cDNA clone HA05D15
3-PRIME, mRNA sequence
Length = 509
Score = 124 bits (266), Expect(3) = 6e-042
Identities = 51/71 (71%), Positives = 60/71 (84%)
Frame = +2 / -3
Query: 773 DVQFIAGDMFESIPPADAVLLKSVLHDWDHDDCVKILKNCKKAIPPREAGGKVIIINMVV 952
+++F+AGDMFESIPPADAVLLK+VLHDW HDDCVKIL+ CK+AIP R AGGKVIII+MV
Sbjct: 477 NLRFVAGDMFESIPPADAVLLKNVLHDWGHDDCVKILQRCKEAIPARSAGGKVIIIDMVR 298
Query: 953 GAGPSDMKHKE 985
G+ D K E
Sbjct: 297 GSLLGDKKIAE 265
Score = 89.5 bits (189), Expect(2) = 2e-023
Identities = 42/66 (63%), Positives = 47/66 (71%)
Frame = -2 / +2
Query: 984 SLCFMSDGPAPTTMFIIITFPPASLGGIAFLQFFSIFTQSSWSQSCKTDFNSTASAGGML 805
S F+S P T+ +IITFPPA L G+A LQ SI TQSSW QSCKT + TASAGGM
Sbjct: 266 SAIFLSPRRDPLTISMIITFPPALLAGMASLQR*SILTQSSWPQSCKTFLSRTASAGGMD 445
Query: 804 SNMSPA 787
SNMSPA
Sbjct: 446 SNMSPA 463
Score = 50.1 bits (103), Expect(3) = 6e-042
Identities = 17/33 (51%), Positives = 26/33 (78%)
Frame = +2 / -2
Query: 980 KEMQAIFDVYIMFINGMERDEQEWSKIFSEAGY 1078
+ M+A+ D++ M NG+ERDE EW +IFS+AG+
Sbjct: 271 RRMEAMQDMFAMCTNGVERDESEWKRIFSDAGF 173
Score = 40.0 bits (81), Expect(2) = 2e-023
Identities = 19/30 (63%), Positives = 22/30 (73%)
Frame = -2 / +3
Query: 1074 PASEKILLHSCSSRSMPLMNMI*TSNMACI 985
PASEKIL HS SSRS PL+++ S MA I
Sbjct: 177 PASEKILFHSLSSRSTPLVHIANMSCMASI 266
Score = 35.4 bits (71), Expect(3) = 6e-042
Identities = 13/19 (68%), Positives = 17/19 (89%)
Frame = +2 / -2
Query: 1082 DYRIIPVLGVRSIIEVYP* 1138
DY+I+PVLG S+IE+YP*
Sbjct: 166 DYKIMPVLGPLSVIEIYP* 110
Database: Hordeum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:16 PM
Number of letters in database: 175,134,539
Number of sequences in database: 312,970
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 715,424,929
Number of Sequences: 312970
Number of extensions: 14009801
Number of successful extensions: 127346
Number of sequences better than 1.0e-020: 201
length of database: 58,378,179
effective HSP length: 53
effective length of database: 41,790,769
effective search space used: 16758098369
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)