TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2419155.2.3
(1354 letters)
Database: Hordeum_nucl_with_EST.fasta
312,970 sequences; 175,134,539 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CK123020.1|CK123020 BES1824101m04 BES1824 Hordeum vulgar... 417 e-136
gb|BG300619.2|BG300619 HVSMEb0017L12f Hordeum vulgare seedl... 380 e-112
gb|BU979667.1|BU979667 HA16O02r HA Hordeum vulgare subsp. v... 193 6e-091
gb|AV833597.1|AV833597 AV833597 K. Sato unpublished cDNA li... 318 6e-086
gb|BI950958.1|BI950958 HVSMEl0023N01f Hordeum vulgare spike... 195 3e-075
gb|CK125373.1|CK125373 BES1824107n06 BES1824 Hordeum vulgar... 149 8e-075
gb|BM377914.2|BM377914 EBem04_SQ004_J05_R embryo, 12 DPA, n... 198 9e-075
gb|BJ462834.1|BJ462834 BJ462834 K. Sato unpublished cDNA li... 177 4e-071
gb|BI951177.1|BI951177 HVSMEl0024N20f Hordeum vulgare spike... 159 4e-070
gb|BU979997.1|BU979997 HA18C17r HA Hordeum vulgare subsp. v... 258 7e-068
gb|BQ462912.1|BQ462912 HI02G10r HI Hordeum vulgare subsp. v... 144 3e-065
gb|CA017820.1|CA017820 HV06G03r HV Hordeum vulgare subsp. v... 233 4e-065
gb|BQ471416.1|BQ471416 HV02F22r HV Hordeum vulgare subsp. v... 233 4e-064
gb|BJ469039.1|BJ469039 BJ469039 K. Sato unpublished cDNA li... 146 1e-061
gb|AY167561.1| Hordeum vulgare subsp. vulgare GAMYB-binding... 106 2e-055
gb|BG365431.1|BG365431 HVSMEi0002K12f Hordeum vulgare 20 DA... 181 3e-053
gb|BU999074.1|BU999074 HI13C08r HI Hordeum vulgare subsp. v... 100 7e-052
gb|BG416044.1|BG416044 HVSMEk0009J02f Hordeum vulgare testa... 103 4e-051
gb|BF258979.3|BF258979 HVSMEf0017E08f Hordeum vulgare seedl... 100 1e-048
gb|CA030163.1|CA030163 HX06E08r HX Hordeum vulgare subsp. v... 107 5e-047
gb|AV915041.1|AV915041 AV915041 K. Sato unpublished cDNA li... 159 7e-045
gb|BQ465498.1|BQ465498 HU03N01r HU Hordeum vulgare subsp. v... 107 1e-044
gb|BJ545230.1|BJ545230 BJ545230 K. Sato unpublished cDNA li... 107 2e-042
gb|CB877262.1|CB877262 HP04C19T HP Hordeum vulgare subsp. v... 118 4e-042
gb|BJ473475.1|BJ473475 BJ473475 K. Sato unpublished cDNA li... 113 6e-041
gb|BU986872.1|BU986872 HF13C12r HF Hordeum vulgare subsp. v... 107 9e-041
gb|BF264315.2|BF264315 HV_CEa0009B14f Hordeum vulgare seedl... 100 3e-040
gb|AL504123.1|AL504123 AL504123 Hordeum vulgare Barke roots... 106 3e-040
gb|BU999167.1|BU999167 HI13I04r HI Hordeum vulgare subsp. v... 104 2e-039
gb|AV914580.1|AV914580 AV914580 K. Sato unpublished cDNA li... 103 2e-039
gb|BQ464548.1|BQ464548 HF02J12r HF Hordeum vulgare subsp. v... 92 7e-039
gb|BQ464168.1|BQ464168 HF01I15T HF Hordeum vulgare subsp. v... 107 1e-038
gb|CA032344.1|CA032344 HX12L20r HX Hordeum vulgare subsp. v... 92 5e-038
gb|BJ463667.1|BJ463667 BJ463667 K. Sato unpublished cDNA li... 101 2e-037
gb|AL504341.1|AL504341 AL504341 Hordeum vulgare Barke roots... 92 2e-037
gb|BE214980.2|BE214980 HV_CEb0005G20f Hordeum vulgare seedl... 106 6e-037
gb|BJ464400.1|BJ464400 BJ464400 K. Sato unpublished cDNA li... 99 1e-036
gb|BQ458970.1|BQ458970 HA02L10r HA Hordeum vulgare subsp. v... 99 1e-036
gb|CA023998.1|CA023998 HZ48B07r HZ Hordeum vulgare subsp. v... 154 1e-036
gb|BF265526.2|BF265526 HV_CEa0012J07f Hordeum vulgare seedl... 80 3e-036
gb|AL503490.1|AL503490 AL503490 Hordeum vulgare Barke roots... 84 1e-035
gb|CB882697.1|CB882697 HL02J13w HL Hordeum vulgare subsp. v... 100 1e-035
gb|BG417558.1|BG417558 HVSMEk0018C06f Hordeum vulgare testa... 94 1e-033
gb|BM817317.1|BM817317 HC108A05_SK.ab1 HC Hordeum vulgare s... 57 3e-033
gb|BU975065.1|BU975065 HB29P18r BC Hordeum vulgare subsp. v... 64 3e-033
gb|BI956073.1|BI956073 HVSMEm0025J05f Hordeum vulgare green... 100 6e-033
gb|AJ427601.1|AJ427601 AJ427601 Hordeum vulgare subsp. vulg... 62 9e-033
emb|AJ495775.1|HVU495775 Hordeum vulgare mRNA for putative ... 62 9e-033
gb|BU999245.1|BU999245 HI13O09r HI Hordeum vulgare subsp. v... 55 5e-032
gb|BQ464553.1|BQ464553 HF02J18r HF Hordeum vulgare subsp. v... 107 6e-032
gb|BF624697.2|BF624697 HVSMEa0017H24f Hordeum vulgare seedl... 99 8e-032
gb|BF616939.2|BF616939 HVSMEc0014A02f Hordeum vulgare seedl... 91 8e-032
gb|BU988468.1|BU988468 HF17L18r HF Hordeum vulgare subsp. v... 99 8e-032
gb|CB883630.1|CB883630 HQ02N03w HQ Hordeum vulgare subsp. v... 95 1e-031
gb|BU971134.1|BU971134 HB16L08r BC Hordeum vulgare subsp. v... 105 2e-031
gb|BF262364.2|BF262364 HV_CEa0003M14f Hordeum vulgare seedl... 106 2e-031
gb|BQ766778.1|BQ766778 EBro08_SQ007_F02_R root, 3 week, dro... 88 8e-031
gb|AV933861.1|AV933861 AV933861 K. Sato unpublished cDNA li... 100 2e-030
gb|BJ464036.1|BJ464036 BJ464036 K. Sato unpublished cDNA li... 106 2e-030
gb|BF260875.2|BF260875 HVSMEf0023C19f Hordeum vulgare seedl... 62 4e-030
gb|BU988267.1|BU988267 HF17C12r HF Hordeum vulgare subsp. v... 103 7e-030
gb|AL508003.1|AL508003 AL508003 Hordeum vulgare Barke devel... 68 2e-029
gb|AV916892.1|AV916892 AV916892 K. Sato unpublished cDNA li... 97 2e-029
gb|AV912824.1|AV912824 AV912824 K. Sato unpublished cDNA li... 90 3e-029
gb|BU987900.1|BU987900 HF16B09r HF Hordeum vulgare subsp. v... 93 4e-029
gb|BJ451074.1|BJ451074 BJ451074 K. Sato unpublished cDNA li... 57 6e-029
gb|BF625775.3|BF625775 HVSMEa0013J04f Hordeum vulgare seedl... 98 6e-029
gb|BF625817.3|BF625817 HVSMEa0013L10f Hordeum vulgare seedl... 53 7e-029
gb|BI778192.2|BI778192 EBro07_SQ002_H20_R root, 3 week, red... 94 7e-029
gb|BJ466613.1|BJ466613 BJ466613 K. Sato unpublished cDNA li... 75 9e-029
gb|BU999214.1|BU999214 HI13M02r HI Hordeum vulgare subsp. v... 93 1e-028
gb|BU974931.1|BU974931 HB29I24r BC Hordeum vulgare subsp. v... 93 1e-028
gb|AW982790.3|AW982790 HVSMEg0004D14f Hordeum vulgare pre-a... 91 1e-028
gb|BE558708.2|BE558708 HV_CEb0020C05f Hordeum vulgare seedl... 100 1e-028
gb|AV916775.1|AV916775 AV916775 K. Sato unpublished cDNA li... 91 1e-028
gb|CA022676.1|CA022676 HZ44A15r HZ Hordeum vulgare subsp. v... 90 5e-028
gb|AL503775.1|AL503775 AL503775 Hordeum vulgare Barke roots... 100 6e-028
gb|BG417697.1|BG417697 HVSMEk0019C18f Hordeum vulgare testa... 60 3e-027
gb|BF623185.3|BF623185 HVSMEa0015A22f Hordeum vulgare seedl... 68 3e-027
gb|BE437713.1|BE437713 SFR006.G01F990621 ITEC SFR Barley Le... 92 1e-026
gb|BU969564.1|BU969564 HB11O02r BC Hordeum vulgare subsp. v... 57 2e-026
gb|BJ474850.1|BJ474850 BJ474850 K. Sato unpublished cDNA li... 75 3e-026
gb|BJ476085.1|BJ476085 BJ476085 K. Sato unpublished cDNA li... 75 3e-026
gb|CK125843.1|CK125843 BES1824111A1c07 BES1824 Hordeum vulg... 59 5e-026
gb|BJ470321.1|BJ470321 BJ470321 K. Sato unpublished cDNA li... 68 5e-026
gb|BE196400.1|BE196400 HVSMEh0092D03f Hordeum vulgare 5-45 ... 90 8e-026
gb|BF624128.2|BF624128 HVSMEa0009M14f Hordeum vulgare seedl... 50 2e-025
gb|CV063570.1|CV063570 BNEL90g5 Barley EST endosperm librar... 90 1e-024
gb|CB882768.1|CB882768 HL02M18w HL Hordeum vulgare subsp. v... 114 1e-024
gb|CA021247.1|CA021247 HZ39I18r HZ Hordeum vulgare subsp. v... 53 2e-024
gb|BU971367.1|BU971367 HB17G14r BC Hordeum vulgare subsp. v... 84 3e-024
gb|CA012713.1|CA012713 HT06D14r HT Hordeum vulgare subsp. v... 62 5e-024
gb|CA007213.1|CA007213 HU07C18r HU Hordeum vulgare subsp. v... 54 7e-024
gb|CA030562.1|CA030562 HX07G20r HX Hordeum vulgare subsp. v... 96 9e-024
gb|CA032586.1|CA032586 HX13I20r HX Hordeum vulgare subsp. v... 96 9e-024
gb|CK123377.2|CK123377 BES1824103l23 BES1824 Hordeum vulgar... 67 4e-023
gb|CA002871.1|CA002871 HS08M08r HS Hordeum vulgare subsp. v... 86 1e-022
gb|BU989777.1|BU989777 HF22K20r HF Hordeum vulgare subsp. v... 50 1e-022
gb|CA014281.1|CA014281 HT10O17r HT Hordeum vulgare subsp. v... 76 2e-022
gb|CA019223.1|CA019223 HV11E13r HV Hordeum vulgare subsp. v... 106 3e-022
gb|BJ464015.1|BJ464015 BJ464015 K. Sato unpublished cDNA li... 87 5e-022
gb|BG367419.2|BG367419 HVSMEi0012D04f Hordeum vulgare 20 DA... 105 8e-022
gb|CA008345.1|CA008345 HU10K18r HU Hordeum vulgare subsp. v... 100 1e-021
gb|AL503592.1|AL503592 AL503592 Hordeum vulgare Barke roots... 53 2e-021
gb|BU987769.1|BU987769 HF15L11r HF Hordeum vulgare subsp. v... 63 2e-021
gb|CA031080.1|CA031080 HX08P08r HX Hordeum vulgare subsp. v... 63 2e-021
gb|AV923313.1|AV923313 AV923313 K. Sato unpublished cDNA li... 63 2e-021
gb|BE194612.1|BE194612 HVSMEh0086D18f Hordeum vulgare 5-45 ... 103 3e-021
emb|X82548.1|HVBKIN2 H.vulgare mRNA for SNF1-related protei... 56 3e-021
gb|AV909449.1|AV909449 AV909449 K. Sato unpublished cDNA li... 91 4e-021
gb|BQ464214.1|BQ464214 HF01K14T HF Hordeum vulgare subsp. v... 102 4e-021
gb|BU973098.1|BU973098 HB23L22r BC Hordeum vulgare subsp. v... 102 4e-021
gb|BM098154.2|BM098154 EBpi03_SQ002_L06_R pistil, 4 DPA, no... 65 4e-021
gb|BM442269.2|BM442269 EBan01_SQ002_L11_R anther, yellow st... 62 5e-021
gb|CK125574.1|CK125574 BES1824109b13 BES1824 Hordeum vulgar... 95 5e-021
gb|AV833156.1|AV833156 AV833156 K. Sato unpublished cDNA li... 62 5e-021
gb|BU974582.1|BU974582 HB28G17r BC Hordeum vulgare subsp. v... 62 6e-021
gb|BU997532.1|BU997532 HI08E08r HI Hordeum vulgare subsp. v... 65 8e-021
>gb|CK123020.1|CK123020 BES1824101m04 BES1824 Hordeum vulgare subsp. vulgare cDNA clone
MPMGp2010M041 5-PRIME, mRNA sequence
Length = 716
Score = 417 bits (905), Expect(3) = e-136
Identities = 174/181 (96%), Positives = 177/181 (97%)
Frame = +2 / +2
Query: 314 ATNETIALKKIRLEQEDEGVPSTAIREISLLKEMNHGNIVRLHDVVHSEKRIYLVFEYLD 493
ATNETIALKKIRLEQEDEGVPSTAIREISLLKEM H NIV+LHDVVHSEKRI+LVFEYLD
Sbjct: 2 ATNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHRNIVKLHDVVHSEKRIWLVFEYLD 181
Query: 494 LDLKKFMDSCPEFAKNPTLIKSYLYQILRGVAYCHSHRVLHRDLKPQNLLIDRRTNALKL 673
LDLKKFMDSCPEFAK+P LIKSYLYQILRGVAYCHSHRVLHRDLKPQNLLIDRRTNALKL
Sbjct: 182 LDLKKFMDSCPEFAKSPALIKSYLYQILRGVAYCHSHRVLHRDLKPQNLLIDRRTNALKL 361
Query: 674 ADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGARQYSTPVDVWSVGCIFAEMVNQKPLF 853
ADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGARQYSTPVDVWSVGCIFAEMVNQKPL
Sbjct: 362 ADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGARQYSTPVDVWSVGCIFAEMVNQKPLV 541
Query: 854 P 856
P
Sbjct: 542 P 544
Score = 345 bits (748), Expect(3) = e-101
Identities = 154/169 (91%), Positives = 157/169 (92%)
Frame = -2 / -3
Query: 846 GFWFTISAKIQPTDHTSTGVEYCLAPSRISGALYHNVTTS*VNVRTGIPNALAKPKSASF 667
GFWFTISAKIQPTDHTSTGVEYCLAP RISGALYHNVTTS*VNVRTGIPNALAKPKSASF
Sbjct: 534 GFWFTISAKIQPTDHTSTGVEYCLAPRRISGALYHNVTTS*VNVRTGIPNALAKPKSASF 355
Query: 666 SALVRRSINKF*GFKSR*RTL*EWQYATPRSIW*RYDLIKVGFLANSGQESMNFLRSRSR 487
SALVRRSINKF*GFKSR*RTL*E Q ATPRSI *RYDLIK G LANSGQESMNF RSRSR
Sbjct: 354 SALVRRSINKF*GFKSR*RTL*E*Q*ATPRSI**RYDLIKAGLLANSGQESMNFFRSRSR 175
Query: 486 YSKTRYMRFSLWTTSCNLTMLPWFISLRREISRMAVDGTPSSSCSRRIF 340
YSKT +MRFSLWTTSC+LTML ISLR EISRMAV+GTPSSSCSRRIF
Sbjct: 174 YSKTSHMRFSLWTTSCSLTMLRCCISLRSEISRMAVEGTPSSSCSRRIF 28
Score = 321 bits (696), Expect(3) = 3e-093
Identities = 131/157 (83%), Positives = 143/157 (91%)
Frame = -1 / -2
Query: 847 WLLVHHFRKDTAHRPHINWCGILPRSKQNFWSSVP*CHYLMSKCTDRNSKCPG*TKVCKL 668
WLLVHHF KDTAH PH+NWCGILPRSK++FWSSVP*CHYLMSKCTDRNSKCP *TKVCKL
Sbjct: 535 WLLVHHFCKDTAH*PHVNWCGILPRSKKDFWSSVP*CHYLMSKCTDRNSKCPC*TKVCKL 356
Query: 667 QCISAPIYQ*VLRFQISVKNSMRMAVRNTTEYLVEV*LDQSGILSKLRAGVHELLEVQIQ 488
QCIS P+YQ*+LRFQIS+KNSMRM + N TEYL+EV*LDQ G L KL AGVHELL+VQIQ
Sbjct: 355 QCISTPVYQ*ILRFQISMKNSMRMTISNATEYLIEV*LDQGGTLGKLWAGVHELLQVQIQ 176
Query: 487 VLEDKVYALLAVDNIM*SDDVAVVHLLEERDLADGGG 377
VLED+ YALLAVDNI+ DDVAV+HLLEERDLADGGG
Sbjct: 175 VLEDEPYALLAVDNIVQLDDVAVLHLLEERDLADGGG 65
Score = 297 bits (642), Expect(3) = 3e-086
Identities = 122/152 (80%), Positives = 130/152 (85%)
Frame = +1 / +1
Query: 394 DLSPQGDEPRQHRQIT*CCPQREAHIPCLRVPGSGPQEVHGLLPGVC*ESHFDQVIPLPD 573
DL+PQGD QHRQ CCPQREAH+ LRVPGSGP+EVHGLLP VC ES DQVIPL D
Sbjct: 82 DLAPQGDAAPQHRQAARCCPQREAHMARLRVPGSGPEEVHGLLPRVCQESRLDQVIPLSD 261
Query: 574 TPWCCVLPFS*SSSPRFETSELIDRSAH*CTEACRLWFSQGIWNSCPYIYS*GSDIMVQS 753
TPW C+L FS*SSS RFETSE IDR A+*CTEACRLWFS+GIWNSCPYIYS*GSDIMVQS
Sbjct: 262 TPWRCLLSFS*SSSSRFETSEFIDRPAY*CTEACRLWFSKGIWNSCPYIYS*GSDIMVQS 441
Query: 754 SRNSAWSEAVFHTS*CVVCGLYLCGNGEPKAT 849
SRN +WSEAVFHTS* VV GLYLC NGEP+AT
Sbjct: 442 SRNPSWSEAVFHTS*RVVSGLYLCRNGEPEAT 537
Score = 252 bits (545), Expect = 3e-066
Identities = 112/135 (82%), Positives = 116/135 (85%)
Frame = -3 / -1
Query: 848 VAFGSPFPQRYSPQTTHQLVWNTASLQAEFLELCTIMSLPHE*MYGQEFQMPWLNQSLQA 669
VA GSPF QRYSP TT QLVWNTASLQ FLELCTIMSLPHE*MYGQEFQMP LNQSLQA
Sbjct: 536 VASGSPFLQRYSPLTTRQLVWNTASLQEGFLELCTIMSLPHE*MYGQEFQMPLLNQSLQA 357
Query: 668 SVH*CADLSISSEVSNLGEELYENGSTQHHGVSGRGMT*SKWDS*QTPGRSP*TS*GPDP 489
SVH* A LSI+SEVSNL EELYEN + Q HGVS RGMT*S+ DS QT GRSP*TS GPDP
Sbjct: 356 SVH*YAGLSINSEVSNLDEELYENDNKQRHGVSDRGMT*SRRDSWQTLGRSP*TSSGPDP 177
Query: 488 GTRRQGICASRCGQH 444
GTRR+ ICASRCGQH
Sbjct: 176 GTRRRAICASRCGQH 132
Score = 197 bits (425), Expect(3) = 2e-053
Identities = 90/111 (81%), Positives = 95/111 (85%)
Frame = +3 / +3
Query: 519 PARSLLRIPL*SSHTSTRYSVVLRTAILIEFFTEI*NLRTY**IGALMH*SLQTLV*PGH 698
PA+SL R+P *SSHTS RYSV L ILIEFF EI*NLR Y** G LMH*SLQTLV* GH
Sbjct: 207 PAQSLPRVPP*SSHTSIRYSVALLIVILIEFFIEI*NLRIY**TGVLMH*SLQTLV*QGH 386
Query: 699 LEFLSVHLLMR**HYGTELQKFCLERGSIPHQLMCGLWAVSLRKW*TKSHY 851
LEFLSVHLLMR**HYGTELQK LERGSIPHQL CG WAVSL+KW*T+SH+
Sbjct: 387 LEFLSVHLLMR**HYGTELQKSFLERGSIPHQLTCGQWAVSLQKW*TRSHW 539
Score = 74.8 bits (157), Expect(3) = e-136
Identities = 29/38 (76%), Positives = 32/38 (84%)
Frame = +2 / +3
Query: 851 FPGDSEIDELFKIFRILGTPNEQSWPGVSCLPDFKTAF 964
FPGDSEIDELFKIFR+LGTPNEQ+WPGVS L + F
Sbjct: 540 FPGDSEIDELFKIFRVLGTPNEQTWPGVSSLA*LQVRF 653
Score = 36.8 bits (74), Expect(3) = e-101
Identities = 13/21 (61%), Positives = 15/21 (71%)
Frame = -2 / -2
Query: 963 KAVLKSGKQLTPGQLCSFGVP 901
K K+LTPGQ+CSFGVP
Sbjct: 652 KRTCSQAKELTPGQVCSFGVP 590
Score = 36.3 bits (73), Expect(3) = 3e-093
Identities = 18/39 (46%), Positives = 24/39 (61%)
Frame = -1 / -1
Query: 967 GESCLEVRQTTDSWPTLLIRCT*YPEYLKKFVDLRIARE 851
G++ L Q +WP L I +PE LK F++LRIARE
Sbjct: 656 GKADL*SGQGAHTWPGLFIWSAKHPEDLK*FINLRIARE 540
Score = 34.1 bits (68), Expect(3) = e-136
Identities = 10/14 (71%), Positives = 14/14 (100%)
Frame = +2 / +1
Query: 944 PDFKTAFPRWQAQD 985
PD+K+AFPRWQA++
Sbjct: 634 PDYKSAFPRWQAEE 675
Score = 33.1 bits (66), Expect(3) = 3e-086
Identities = 15/33 (45%), Positives = 21/33 (63%)
Frame = +1 / +2
Query: 841 KATIPWRF*DRRTF*DIQDTRYTE*AELARSQL 939
K +PWRF*D *D+Q +++* LAR +L
Sbjct: 530 KPLVPWRF*D**II*DLQGAWHSK*TNLARCEL 628
Score = 29.0 bits (57), Expect(3) = 3e-086
Identities = 10/18 (55%), Positives = 15/18 (83%)
Frame = +2 / +2
Query: 962 FPRWQAQDLATVVPNLDP 1015
FP + ++LAT+VPNL+P
Sbjct: 653 FPGGRQRNLATIVPNLEP 706
Score = 29.0 bits (57), Expect(3) = 2e-053
Identities = 14/26 (53%), Positives = 18/26 (69%)
Frame = +3 / +1
Query: 852 SLAILRSTNFLRYSGY*VHRMSRVGQ 929
SLAILR N+LR SG +M++ GQ
Sbjct: 541 SLAILRLMNYLRSSGCLALQMNKPGQ 618
Score = 26.3 bits (51), Expect(3) = e-101
Identities = 12/22 (54%), Positives = 15/22 (68%)
Frame = -2 / -1
Query: 1005 FGTTVARS*ACHLGKAVLKSGK 940
+G + S ACHLGKA L SG+
Sbjct: 695 WGQLLQGSSACHLGKADL*SGQ 630
Score = 24.4 bits (47), Expect(3) = 3e-093
Identities = 8/14 (57%), Positives = 11/14 (78%)
Frame = -1 / -2
Query: 1024 QPSRVKIWDYCCQV 983
+P+R KI D CC+V
Sbjct: 715 RPTRFKIGDNCCKV 674
Score = 22.1 bits (42), Expect(3) = 2e-053
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = +3 / +3
Query: 444 MLSTARSAY 470
MLSTARSAY
Sbjct: 132 MLSTARSAY 158
>gb|BG300619.2|BG300619 HVSMEb0017L12f Hordeum vulgare seedling shoot EST library HVcDNA0002
(Dehydration stress) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEb0017L12f, mRNA sequence
Length = 622
Score = 380 bits (823), Expect(2) = e-112
Identities = 153/181 (84%), Positives = 166/181 (91%)
Frame = +2 / +3
Query: 536 KNPTLIKSYLYQILRGVAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVR 715
KN ++KS+LYQILRG+AYCHSHRVLHRDLKPQNLLIDRRTN+LKLADFGLARAFGIPVR
Sbjct: 75 KNHHIVKSFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNSLKLADFGLARAFGIPVR 254
Query: 716 TFTHEVVTLWYRAPEILLGARQYSTPVDVWSVGCIFAEMVNQKPLFPGDSEIDELFKIFR 895
TFTHEVVTLWYRAPEILLGARQYSTPVDVWSVGCIFAEMVNQKPLFPGDSEIDELFKIFR
Sbjct: 255 TFTHEVVTLWYRAPEILLGARQYSTPVDVWSVGCIFAEMVNQKPLFPGDSEIDELFKIFR 434
Query: 896 ILGTPNEQSWPGVSCLPDFKTAFPRWQAQDLATVVPNLDPAGLDLLSKMLRYEPSKRITA 1075
I+GTPNE++WPGVS LPD+K AFP+W + D A VVP L+P GLDLLSKML PS+R A
Sbjct: 435 IMGTPNEETWPGVSSLPDYK*AFPKWPSVDPALVVPTLEPLGLDLLSKMLWLNPSRRFNA 614
Query: 1076 R 1078
R
Sbjct: 615 R 617
Score = 237 bits (513), Expect(2) = 2e-069
Identities = 115/183 (62%), Positives = 127/183 (69%)
Frame = -2 / -1
Query: 1083 ACLAVILLLGSYRSILERRSNPAGSRFGTTVARS*ACHLGKAVLKSGKQLTPGQLCSFGV 904
A A+ LLLG +SILERRS+P GS GTT A S HLGKA L SG + TPGQ+ S GV
Sbjct: 622 AVRALNLLLGFNQSILERRSSPKGSSVGTTSAGSTDGHLGKAYL*SGNEETPGQVSSLGV 443
Query: 903 PXXXXXXXXXXXXXXXXXSGFWFTISAKIQPTDHTSTGVEYCLAPSRISGALYHNVTTS* 724
P GF FTISAK+QPTDHTSTGVEYCLAP RISGALYHNVTTS*
Sbjct: 442 PIILKILKSSSISESPGNKGF*FTISAKMQPTDHTSTGVEYCLAPRRISGALYHNVTTS* 263
Query: 723 VNVRTGIPNALAKPKSASFSALVRRSINKF*GFKSR*RTL*EWQYATPRSIW*RYDLIKV 544
VNV TG+PNALA PKSASF+ LVRRS+++F G +S * T EWQ A PR IW*R DL
Sbjct: 262 VNVLTGMPNALANPKSASFNELVRRSMSRFWGLRSL*STRCEWQ*AMPRRIW*RKDLTMW 83
Query: 543 GFL 535
FL
Sbjct: 82 WFL 74
Score = 185 bits (398), Expect(2) = 8e-053
Identities = 81/178 (45%), Positives = 119/178 (66%)
Frame = -1 / -3
Query: 1069 DSFAWLVSKHFREKVQPSRVKIWDYCCQVLSLPPGESCLEVRQTTDSWPTLLIRCT*YPE 890
+S AW+ +HFR+K+Q R + W++ C + P GES VR ++WP IR E
Sbjct: 608 ESSAWI*PEHFRKKIQSQRFECWNHKCGIHGRPLGESLFVVR*RRNTWPGFFIRSAHNSE 429
Query: 889 YLKKFVDLRIARE*WLLVHHFRKDTAHRPHINWCGILPRSKQNFWSSVP*CHYLMSKCTD 710
L++F++LRI R+* L+HHF K+ +RPHIN ILP +++NFW SVP*C++LMS+C D
Sbjct: 428 NLEEFINLRITRK*RFLIHHFSKNATNRPHINRGRILPCTQKNFWRSVP*CYHLMSECPD 249
Query: 709 RNSKCPG*TKVCKLQCISAPIYQ*VLRFQISVKNSMRMAVRNTTEYLVEV*LDQSGIL 536
RN++ PG ++V KLQ I A IY+ VL +I VK+++R+AV + + LVE LD +L
Sbjct: 248 RNAERPGQSEVSKLQRIGAAIYEQVLGLEIPVKHAVRVAVGDAAQDLVEEGLDYVVVL 75
Score = 131 bits (281), Expect(2) = 3e-036
Identities = 74/176 (42%), Positives = 96/176 (54%)
Frame = +1 / +2
Query: 538 ESHFDQVIPLPDTPWCCVLPFS*SSSPRFETSELIDRSAH*CTEACRLWFSQGIWNSCPY 717
E QV+PLPD +LP + +S + E RS H EAC L QG+ +SC
Sbjct: 77 EPPHSQVLPLPDPARHRLLPLAPRASQGSQAPEPAHRSPHQFVEAC*LRIGQGVRHSCQD 256
Query: 718 IYS*GSDIMVQSSRNSAWSEAVFHTS*CVVCGLYLCGNGEPKATIPWRF*DRRTF*DIQD 897
I+S*G +IMVQS+RNS+ +A+F+ *CVV L+ C NGE + I W F*D T D Q+
Sbjct: 257 IHS*GGNIMVQSARNSSGCKAIFYPC*CVVGWLHFC*NGESETFISW*F*D**TLQDFQN 436
Query: 898 TRYTE*AELARSQLFA*LQDSFPQVAXXXXXXXXXXXXXCWVGPSL*NASIRAKQK 1065
++ * LAR *LQ SFPQVA G S *NA +++KQK
Sbjct: 437 YGHS**RNLARCFFVT*LQISFPQVAVRGSRTCGSNTRTFGTGSSF*NALVKSKQK 604
Score = 104 bits (221), Expect = 1e-021
Identities = 66/147 (44%), Positives = 79/147 (53%)
Frame = +3 / +1
Query: 537 RIPL*SSHTSTRYSVVLRTAILIEFFTEI*NLRTY**IGALMH*SLQTLV*PGHLEFLSV 716
R *SS +STR TA FT I + RT *I A + *SL T PG FLS
Sbjct: 76 RTTT*SSPSSTRSCAASPTATRTACFTGISSPRTCS*IAAPIR*SLLTSDWPGRSAFLSG 255
Query: 717 HLLMR**HYGTELQKFCLERGSIPHQLMCGLWAVSLRKW*TKSHYSLAILRSTNFLRYSG 896
H LMR *HYGTE QKF +G+I LMCG L KW* ++ Y L ILR N R+S
Sbjct: 256 HSLMRW*HYGTERQKFFWVQGNILPLLMCGRLVAFLLKW*IRNLYFLVILRLMNSSRFSE 435
Query: 897 Y*VHRMSRVGQESVVCLTSRQLSPGGK 977
M + GQ + LT+ +LSP G+
Sbjct: 436 LWALLMKKPGQVFLRYLTTNKLSPSGR 516
Score = 90.0 bits (190), Expect(3) = 5e-024
Identities = 52/112 (46%), Positives = 62/112 (55%)
Frame = -3 / -2
Query: 887 S*KVRRSQNRQGIVAFGSPFPQRYSPQTTHQLVWNTASLQAEFLELCTIMSLPHE*MYGQ 708
S*+V +SQN Q I SPF Q+ + TTHQ N A EFL LCTIM PHE*M Q
Sbjct: 426 S*RVHQSQNHQEIKVSDSPFQQKCNQPTTHQQG*NIALHPEEFLALCTIMLPPHE*MS*Q 247
Query: 707 EFQMPWLNQSLQASVH*CADLSISSEVSNLGEELYENGSTQHHGVSGRGMT* 552
E + PW +S QAS + C DL S + E +GS + SGRG T*
Sbjct: 246 ECRTPWPIRSQQASTNWCGDL*AGSGA*DPCEARGASGSRRCRAGSGRGRT* 91
Score = 48.3 bits (99), Expect(2) = e-112
Identities = 19/22 (86%), Positives = 20/22 (90%)
Frame = +2 / +3
Query: 467 IYLVFEYLDLDLKKFMDSCPEF 532
IYLVFEYLDLDLKK MDS P+F
Sbjct: 9 IYLVFEYLDLDLKKHMDSSPDF 74
Score = 46.0 bits (94), Expect(2) = 2e-069
Identities = 19/21 (90%), Positives = 20/21 (95%)
Frame = -2 / -1
Query: 528 SGQESMNFLRSRSRYSKTRYM 466
SG+ESM FLRSRSRYSKTRYM
Sbjct: 70 SGEESMCFLRSRSRYSKTRYM 8
Score = 43.2 bits (88), Expect(2) = 8e-053
Identities = 16/27 (59%), Positives = 24/27 (88%)
Frame = -1 / -3
Query: 541 ILSKLRAGVHELLEVQIQVLEDKVYAL 461
++ ++R GVH LLEV+++VLED+VYAL
Sbjct: 83 VVLEVRGGVHVLLEVEVEVLEDEVYAL 3
Score = 41.4 bits (84), Expect(2) = 3e-036
Identities = 16/22 (72%), Positives = 17/22 (77%)
Frame = +1 / +2
Query: 466 HIPCLRVPGSGPQEVHGLLPGV 531
HIP LRVP PQE HGLLPG+
Sbjct: 8 HIPRLRVPRPRPQEAHGLLPGL 73
Score = 36.3 bits (73), Expect(3) = 5e-024
Identities = 15/22 (68%), Positives = 17/22 (77%)
Frame = -3 / -2
Query: 530 TPGRSP*TS*GPDPGTRRQGIC 465
+PGRSP S*G GTRR+GIC
Sbjct: 72 SPGRSPCAS*GRGRGTRRRGIC 7
Score = 23.1 bits (44), Expect(3) = 5e-024
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = -3 / -2
Query: 974 ATWGKLS*SQANN*LLANSAH 912
ATWGKL SQ LA H
Sbjct: 513 ATWGKLICSQVTKKHLARFLH 451
>gb|BU979667.1|BU979667 HA16O02r HA Hordeum vulgare subsp. vulgare cDNA clone HA16O02
5-PRIME, mRNA sequence
Length = 516
Score = 193 bits (415), Expect(2) = 6e-091
Identities = 78/86 (90%), Positives = 83/86 (96%)
Frame = +2 / +3
Query: 536 KNPTLIKSYLYQILRGVAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVR 715
KN ++KS+LYQILRG+AYCHSHRVLHRDLKPQNLLIDRRTN+LKLADFGLARAFGIPVR
Sbjct: 258 KNHHIVKSFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNSLKLADFGLARAFGIPVR 437
Query: 716 TFTHEVVTLWYRAPEILLGARQYSTP 793
TFTHEVVTLW RAPEILLGARQYSTP
Sbjct: 438 TFTHEVVTLWDRAPEILLGARQYSTP 515
Score = 162 bits (349), Expect(2) = 6e-091
Identities = 71/82 (86%), Positives = 74/82 (90%)
Frame = +2 / +3
Query: 287 GVVYKALDKATNETIALKKIRLEQEDEGVPSTAIREISLLKEMNHGNIVRLHDVVHSEKR 466
GVVYKA D+ TNETIALKKIRLEQEDEGVPSTAIREISLLKEM H NIVRL DVVH+EK
Sbjct: 12 GVVYKAKDRYTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHRNIVRLQDVVHNEKC 191
Query: 467 IYLVFEYLDLDLKKFMDSCPEF 532
IYLVFEYLDLDLKK MDS P+F
Sbjct: 192 IYLVFEYLDLDLKKHMDSSPDF 257
Score = 132 bits (282), Expect(2) = 2e-061
Identities = 61/86 (70%), Positives = 67/86 (77%)
Frame = -2 / -3
Query: 792 GVEYCLAPSRISGALYHNVTTS*VNVRTGIPNALAKPKSASFSALVRRSINKF*GFKSR* 613
GVEYCLAP RISGAL HNVTTS*VNV TG+PNALA PKSASF+ LVRRS+++F G +S *
Sbjct: 514 GVEYCLAPRRISGALSHNVTTS*VNVLTGMPNALANPKSASFNELVRRSMSRFWGLRSL* 335
Query: 612 RTL*EWQYATPRSIW*RYDLIKVGFL 535
T EWQ A PR IW*R DL FL
Sbjct: 334 STRCEWQ*AMPRRIW*RKDLTMWWFL 257
Score = 124 bits (266), Expect(2) = 2e-061
Identities = 58/81 (71%), Positives = 61/81 (75%)
Frame = -2 / -3
Query: 528 SGQESMNFLRSRSRYSKTRYMRFSLWTTSCNLTMLPWFISLRREISRMAVDGTPSSSCSR 349
SG+ESM FLRSRSRYSKTRYM FSL TTSC+LTML ISLRREISRMAV+GTPSSSCS
Sbjct: 253 SGEESMCFLRSRSRYSKTRYMHFSLCTTSCSLTMLRCCISLRREISRMAVEGTPSSSCSS 74
Query: 348 RIFXXXXXXXXXXXXXLYTTP 286
RIF LYTTP
Sbjct: 73 RIFLSAIVSLV*RSLALYTTP 11
Score = 95.9 bits (203), Expect(2) = 1e-038
Identities = 43/83 (51%), Positives = 62/83 (74%)
Frame = -1 / -2
Query: 784 ILPRSKQNFWSSVP*CHYLMSKCTDRNSKCPG*TKVCKLQCISAPIYQ*VLRFQISVKNS 605
ILP +++NFW SVP*C++LMS+C DRN++ PG ++V KLQ I A IY+ VL +I VK++
Sbjct: 506 ILPCTQKNFWRSVP*CYHLMSECPDRNAERPGQSEVSKLQRIGAAIYEQVLGLEIPVKHA 327
Query: 604 MRMAVRNTTEYLVEV*LDQSGIL 536
+R+AV + T+ LVE LD +L
Sbjct: 326 VRVAVGDATQDLVEEGLDYVVVL 258
Score = 84.9 bits (179), Expect(2) = 1e-038
Identities = 34/55 (61%), Positives = 46/55 (83%)
Frame = -1 / -2
Query: 541 ILSKLRAGVHELLEVQIQVLEDKVYALLAVDNIM*SDDVAVVHLLEERDLADGGG 377
++ ++R GVH LLEV+++VLED+VYALL V +++ DDV V+HLLEE DLADGGG
Sbjct: 266 VVLEVRGGVHVLLEVEVEVLEDEVYALLVVHHVLQPDDVTVLHLLEEGDLADGGG 102
Score = 74.8 bits (157), Expect(2) = 1e-025
Identities = 36/84 (42%), Positives = 50/84 (59%)
Frame = +1 / +2
Query: 538 ESHFDQVIPLPDTPWCCVLPFS*SSSPRFETSELIDRSAH*CTEACRLWFSQGIWNSCPY 717
E QV+PLPD W +LP + +S + E RS H EAC L QG+ +SC
Sbjct: 260 EPPHSQVLPLPDPAWHRLLPLAPRASQGSQAPEPAHRSPHQFVEAC*LRIGQGVRHSCQD 439
Query: 718 IYS*GSDIMVQSSRNSAWSEAVFH 789
I+S*G +IM QS+RNS+ +A+F+
Sbjct: 440 IHS*GGNIMGQSARNSSGCKAIFY 511
Score = 62.5 bits (130), Expect(2) = 1e-025
Identities = 28/46 (60%), Positives = 29/46 (63%)
Frame = +1 / +2
Query: 394 DLSPQGDEPRQHRQIT*CCPQREAHIPCLRVPGSGPQEVHGLLPGV 531
DL PQGD HRQ QRE HIP LRVP PQE HGLLPG+
Sbjct: 119 DLPPQGDAAP*HRQAAGRGAQREVHIPRLRVPRPRPQEAHGLLPGL 256
>gb|AV833597.1|AV833597 AV833597 K. Sato unpublished cDNA library: Hordeum vulgare subsp.
vulgare shoots germination Hordeum vulgare subsp.
vulgare cDNA clone bags16e07, mRNA sequence
Length = 450
Score = 318 bits (688), Expect = 6e-086
Identities = 134/142 (94%), Positives = 138/142 (97%)
Frame = +2 / +2
Query: 281 TYGVVYKALDKATNETIALKKIRLEQEDEGVPSTAIREISLLKEMNHGNIVRLHDVVHSE 460
TYGVVYKA D+ATNETIALKKIRLEQEDEGVPSTAIREISLLKEM H NIV+LHDVVHSE
Sbjct: 23 TYGVVYKARDRATNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHRNIVKLHDVVHSE 202
Query: 461 KRIYLVFEYLDLDLKKFMDSCPEFAKNPTLIKSYLYQILRGVAYCHSHRVLHRDLKPQNL 640
KRI+LVFEYLDLDLKKFMDSCPEFAK+P LIKSYLYQILRGVAYCHSHRVLHRDLKPQNL
Sbjct: 203 KRIWLVFEYLDLDLKKFMDSCPEFAKSPALIKSYLYQILRGVAYCHSHRVLHRDLKPQNL 382
Query: 641 LIDRRTNALKLADFGLARAFGI 706
LIDRRTNALKLADFGLARAFGI
Sbjct: 383 LIDRRTNALKLADFGLARAFGI 448
Score = 249 bits (539), Expect = 2e-065
Identities = 116/143 (81%), Positives = 119/143 (83%)
Frame = -2 / -1
Query: 708 GIPNALAKPKSASFSALVRRSINKF*GFKSR*RTL*EWQYATPRSIW*RYDLIKVGFLAN 529
GIPNALAKPKSASFSALVRRSINKF*GFKSR*RTL*E Q ATPRSI *RYDLIK G LAN
Sbjct: 450 GIPNALAKPKSASFSALVRRSINKF*GFKSR*RTL*E*Q*ATPRSI**RYDLIKAGLLAN 271
Query: 528 SGQESMNFLRSRSRYSKTRYMRFSLWTTSCNLTMLPWFISLRREISRMAVDGTPSSSCSR 349
SGQESMNF RSRSRYSKT +MRFSLWTTSC+LTML ISLR EISRMAV+GTPSSSCSR
Sbjct: 270 SGQESMNFFRSRSRYSKTSHMRFSLWTTSCSLTMLRCCISLRSEISRMAVEGTPSSSCSR 91
Query: 348 RIFXXXXXXXXXXXXXLYTTPYV 280
RIF LYTTPYV
Sbjct: 90 RIFLSAMVSLVALSRALYTTPYV 22
Score = 206 bits (445), Expect(2) = 1e-054
Identities = 89/110 (80%), Positives = 98/110 (89%)
Frame = -1 / -3
Query: 706 NSKCPG*TKVCKLQCISAPIYQ*VLRFQISVKNSMRMAVRNTTEYLVEV*LDQSGILSKL 527
NSKCP *TKVCKLQCIS P+YQ*+LRFQIS+KNSMRM + N TEYL+EV*LDQ G L KL
Sbjct: 448 NSKCPC*TKVCKLQCISTPVYQ*ILRFQISMKNSMRMTISNATEYLIEV*LDQGGTLGKL 269
Query: 526 RAGVHELLEVQIQVLEDKVYALLAVDNIM*SDDVAVVHLLEERDLADGGG 377
AGVHELL+VQIQVLED+ YALLAVDNI+ DDVAV+HLLEERDLADGGG
Sbjct: 268 WAGVHELLQVQIQVLEDEPYALLAVDNIVQLDDVAVLHLLEERDLADGGG 119
Score = 200 bits (432), Expect = 1e-050
Identities = 81/105 (77%), Positives = 87/105 (82%)
Frame = +1 / +1
Query: 394 DLSPQGDEPRQHRQIT*CCPQREAHIPCLRVPGSGPQEVHGLLPGVC*ESHFDQVIPLPD 573
DL+PQGD QHRQ CCPQREAH+ LRVPGSGP+EVHGLLP VC ES DQVIPL D
Sbjct: 136 DLAPQGDAAPQHRQAARCCPQREAHMARLRVPGSGPEEVHGLLPRVCQESRLDQVIPLSD 315
Query: 574 TPWCCVLPFS*SSSPRFETSELIDRSAH*CTEACRLWFSQGIWNS 708
TPW C+L FS*SSS RFETSE IDR A+*CTEACRLWFS+GIWNS
Sbjct: 316 TPWRCLLSFS*SSSSRFETSEFIDRPAY*CTEACRLWFSKGIWNS 450
Score = 158 bits (340), Expect = 6e-038
Identities = 71/88 (80%), Positives = 75/88 (85%)
Frame = -3 / -2
Query: 707 EFQMPWLNQSLQASVH*CADLSISSEVSNLGEELYENGSTQHHGVSGRGMT*SKWDS*QT 528
EFQMP LNQSLQASVH* A LSI+SEVSNL EELYEN + Q HGVS RGMT*S+ DS QT
Sbjct: 449 EFQMPLLNQSLQASVH*YAGLSINSEVSNLDEELYENDNKQRHGVSDRGMT*SRRDSWQT 270
Query: 527 PGRSP*TS*GPDPGTRRQGICASRCGQH 444
GRSP*TS GPDPGTRR+ ICASRCGQH
Sbjct: 269 LGRSP*TSSGPDPGTRRRAICASRCGQH 186
Score = 100 bits (214), Expect(2) = 2e-021
Identities = 49/63 (77%), Positives = 51/63 (80%)
Frame = +3 / +3
Query: 519 PARSLLRIPL*SSHTSTRYSVVLRTAILIEFFTEI*NLRTY**IGALMH*SLQTLV*PGH 698
PA+SL R+P *SSHTS RYSV L ILIEFF EI*NLR Y** G LMH*SLQTLV* GH
Sbjct: 261 PAQSLPRVPP*SSHTSIRYSVALLIVILIEFFIEI*NLRIY**TGVLMH*SLQTLV*QGH 440
Query: 699 LEF 707
LEF
Sbjct: 441 LEF 449
Score = 27.6 bits (54), Expect(2) = 1e-054
Identities = 11/14 (78%), Positives = 11/14 (78%)
Frame = -1 / -3
Query: 319 GGLVQRLVHHPVRA 278
GG V LVHHPVRA
Sbjct: 61 GGPVPGLVHHPVRA 20
Score = 22.1 bits (42), Expect(2) = 2e-021
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = +3 / +3
Query: 444 MLSTARSAY 470
MLSTARSAY
Sbjct: 186 MLSTARSAY 212
>gb|BI950958.1|BI950958 HVSMEl0023N01f Hordeum vulgare spike EST library HVcDNA0012
(Fusarium infected) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEl0023N01f, mRNA sequence
Length = 469
Score = 195 bits (420), Expect(2) = 3e-075
Identities = 84/98 (85%), Positives = 89/98 (90%)
Frame = +2 / +1
Query: 239 AMEQYEKVEKIGEGTYGVVYKALDKATNETIALKKIRLEQEDEGVPSTAIREISLLKEMN 418
AM+ YEKVEKIGEGTYGVVYKA D+ TNETIALKKIRLEQEDEGVPST IREISLLKEM+
Sbjct: 28 AMDHYEKVEKIGEGTYGVVYKANDRYTNETIALKKIRLEQEDEGVPSTVIREISLLKEMH 207
Query: 419 HGNIVRLHDVVHSEKRIYLVFEYLDLDLKKFMDSCPEF 532
H NIVRL DVVH+EK IYLVFEYLDLDLKK MDS P+F
Sbjct: 208 HRNIVRLQDVVHNEKCIYLVFEYLDLDLKKHMDSSPDF 321
Score = 150 bits (322), Expect(2) = 3e-047
Identities = 72/105 (68%), Positives = 76/105 (72%)
Frame = -2 / -3
Query: 528 SGQESMNFLRSRSRYSKTRYMRFSLWTTSCNLTMLPWFISLRREISRMAVDGTPSSSCSR 349
SG+ESM FLRSRSRYSKTRYM FSL TTSC+LTML ISLRREISRM V+GTPSSSCS
Sbjct: 317 SGEESMCFLRSRSRYSKTRYMHFSLCTTSCSLTMLR*CISLRREISRMTVEGTPSSSCSS 138
Query: 348 RIFXXXXXXXXXXXXXLYTTPYVPSPIFSTFSYCSIACPQCERGR 214
RIF LYTTPYVPSPIFSTFS S+A R R
Sbjct: 137 RIFLRAIVSLV*RSLALYTTPYVPSPIFSTFS*WSMARRSVRRRR 3
Score = 108 bits (230), Expect(2) = 3e-075
Identities = 42/49 (85%), Positives = 47/49 (95%)
Frame = +2 / +1
Query: 536 KNPTLIKSYLYQILRGVAYCHSHRVLHRDLKPQNLLIDRRTNALKLADF 682
KN ++KS+LYQILRG+AYCHSHRVLHRDLKPQNLLIDRRTN+LKLADF
Sbjct: 322 KNHHIVKSFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNSLKLADF 468
Score = 81.7 bits (172), Expect(3) = 8e-023
Identities = 33/55 (60%), Positives = 45/55 (81%)
Frame = -1 / -2
Query: 541 ILSKLRAGVHELLEVQIQVLEDKVYALLAVDNIM*SDDVAVVHLLEERDLADGGG 377
++ ++R GVH LLEV+++VLED+VYALL V +++ DDV V+HLLEE DLAD GG
Sbjct: 330 VVLEVRGGVHVLLEVEVEVLEDEVYALLVVHHVLQPDDVTVMHLLEEGDLADDGG 166
Score = 59.3 bits (123), Expect(2) = 3e-047
Identities = 29/49 (59%), Positives = 34/49 (69%)
Frame = -2 / -3
Query: 681 KSASFSALVRRSINKF*GFKSR*RTL*EWQYATPRSIW*RYDLIKVGFL 535
KSASF+ LVRRS+++F G +S * T EWQ A PR IW*R DL FL
Sbjct: 467 KSASFNELVRRSMSRFWGLRSL*STRCEWQ*AMPRRIW*RKDLTMWWFL 321
Score = 41.4 bits (84), Expect(3) = 8e-023
Identities = 22/49 (44%), Positives = 32/49 (65%)
Frame = -1 / -2
Query: 682 KVCKLQCISAPIYQ*VLRFQISVKNSMRMAVRNTTEYLVEV*LDQSGIL 536
+V KLQ I A IY+ VL +I VK+++R+AV + + LVE LD +L
Sbjct: 468 EVSKLQRIGAAIYEQVLGLEIPVKHAVRVAVGDAAQDLVEEGLDYVVVL 322
Score = 22.1 bits (42), Expect(3) = 8e-023
Identities = 9/14 (64%), Positives = 10/14 (71%)
Frame = -1 / -2
Query: 319 GGLVQRLVHHPVRA 278
G V LVHHPVR+
Sbjct: 108 GVAVIGLVHHPVRS 67
>gb|CK125373.1|CK125373 BES1824107n06 BES1824 Hordeum vulgare subsp. vulgare cDNA clone
MPMGp2010N067 5-PRIME, mRNA sequence
Length = 930
Score = 149 bits (321), Expect(4) = 8e-075
Identities = 57/106 (53%), Positives = 71/106 (66%)
Frame = +2 / +1
Query: 635 NLLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGARQYSTPVDVWSVG 814
N L+ LKL DFGLAR FG P R FTH+V WYRAPE+L G +QY + VDVW+ G
Sbjct: 436 NNLLIGAEGQLKLGDFGLARIFGSPERNFTHQVFARWYRAPELLFGTKQYGSAVDVWAAG 615
Query: 815 CIFAEMVNQKPLFPGDSEIDELFKIFRILGTPNEQSWPGVSCLPDF 952
CIFAE++ ++P G S+ID+L KIF GTP WP + CLPD+
Sbjct: 616 CIFAELLLRRPFLQGSSDIDQLGKIFAAFGTPKSSQWPDMVCLPDY 753
Score = 104 bits (222), Expect(4) = 8e-075
Identities = 44/87 (50%), Positives = 63/87 (72%)
Frame = +2 / +1
Query: 245 EQYEKVEKIGEGTYGVVYKALDKATNETIALKKIRLEQEDEGVPSTAIREISLLKEMNHG 424
++Y K E +GEGTYGVV+KA+D T ET+A+K+IRL + EGV TA+REI LLKE+
Sbjct: 52 DRYLKREVLGEGTYGVVFKAIDTKTGETVAIKRIRLGKYKEGVNFTALREIKLLKELKDP 231
Query: 425 NIVRLHDVVHSEKRIYLVFEYLDLDLK 505
NI+ L D + ++LVFE+++ DL+
Sbjct: 232 NIIELIDAFPYKGNLHLVFEFMETDLE 312
Score = 57.0 bits (118), Expect(4) = 8e-075
Identities = 21/36 (58%), Positives = 28/36 (77%)
Frame = +2 / +1
Query: 539 NPTLIKSYLYQILRGVAYCHSHRVLHRDLKPQNLLI 646
+P IKSY+ +L+G+A+CH VLHRD+KP NLLI
Sbjct: 343 SPADIKSYIQMMLKGLAFCHKKWVLHRDMKPNNLLI 450
Score = 27.6 bits (54), Expect(4) = 8e-075
Identities = 12/35 (34%), Positives = 18/35 (51%)
Frame = +2 / +1
Query: 977 AQDLATVVPNLDPAGLDLLSKMLRYEPSKRITARQ 1081
A L ++ P LDLLS+M Y+P + + Q
Sbjct: 775 APPLRSLFPMASDDALDLLSRMFTYDPKSKNSPAQ 879
>gb|BM377914.2|BM377914 EBem04_SQ004_J05_R embryo, 12 DPA, no treatment, cv Optic, EBem04
Hordeum vulgare subsp. vulgare cDNA clone
EBem04_SQ004_J05 5', mRNA sequence
Length = 583
Score = 198 bits (426), Expect(2) = 9e-075
Identities = 85/95 (89%), Positives = 88/95 (92%)
Frame = +2 / +1
Query: 248 QYEKVEKIGEGTYGVVYKALDKATNETIALKKIRLEQEDEGVPSTAIREISLLKEMNHGN 427
QYEKVEKIGEGTYGVVYKA D+ TNETIALKKIRLEQEDEGVPSTAIREISLLKEM H N
Sbjct: 4 QYEKVEKIGEGTYGVVYKAKDRYTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHRN 183
Query: 428 IVRLHDVVHSEKRIYLVFEYLDLDLKKFMDSCPEF 532
IVRLHDVVH+EK IYLVFEYLDLDLKK MDS P+F
Sbjct: 184 IVRLHDVVHNEKCIYLVFEYLDLDLKKHMDSSPDF 288
Score = 158 bits (340), Expect(2) = 7e-049
Identities = 71/94 (75%), Positives = 74/94 (78%)
Frame = -2 / -3
Query: 528 SGQESMNFLRSRSRYSKTRYMRFSLWTTSCNLTMLPWFISLRREISRMAVDGTPSSSCSR 349
SG+ESM FLRSRSRYSKTRYM FSL TTSC+LTML ISLRREISRMAV+GTPSSSCS
Sbjct: 284 SGEESMCFLRSRSRYSKTRYMHFSLCTTSCSLTMLRCCISLRREISRMAVEGTPSSSCSS 105
Query: 348 RIFXXXXXXXXXXXXXLYTTPYVPSPIFSTFSYC 247
RIF LYTTPYVPSPIFSTFSYC
Sbjct: 104 RIFLSAIVSLV*RSLALYTTPYVPSPIFSTFSYC 3
Score = 106 bits (226), Expect(2) = 9e-075
Identities = 41/46 (89%), Positives = 46/46 (100%)
Frame = +2 / +1
Query: 551 IKSYLYQILRGVAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGL 688
++S+LYQILRG+AYCHSHRVLHRDLKPQNLLIDRRTN+LKLADFGL
Sbjct: 445 LQSFLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNSLKLADFGL 582
Score = 84.5 bits (178), Expect(3) = 1e-022
Identities = 34/55 (61%), Positives = 46/55 (83%)
Frame = -1 / -2
Query: 541 ILSKLRAGVHELLEVQIQVLEDKVYALLAVDNIM*SDDVAVVHLLEERDLADGGG 377
++ ++R GVH LLEV+++VLED+VYALL V +++ DDV V+HLLEE DLADGGG
Sbjct: 297 VVLEVRGGVHVLLEVEVEVLEDEVYALLVVHHVVQPDDVTVLHLLEEGDLADGGG 133
Score = 59.3 bits (123), Expect(2) = 7e-049
Identities = 27/43 (62%), Positives = 32/43 (74%)
Frame = -2 / -3
Query: 684 PKSASFSALVRRSINKF*GFKSR*RTL*EWQYATPRSIW*RYD 556
PKSASF+ LVRRS+++F G +S * T EWQ A PR IW*R D
Sbjct: 578 PKSASFNELVRRSMSRFWGLRSL*STRCEWQ*AMPRRIW*RKD 450
Score = 41.8 bits (85), Expect(3) = 1e-022
Identities = 20/41 (48%), Positives = 30/41 (73%)
Frame = -1 / -2
Query: 685 TKVCKLQCISAPIYQ*VLRFQISVKNSMRMAVRNTTEYLVE 563
++V KLQ I A IY+ VL +I VK+++R+AV + T+ LVE
Sbjct: 579 SEVSKLQRIGAAIYEQVLGLEIPVKHAVRVAVGDATQDLVE 457
Score = 22.6 bits (43), Expect(3) = 1e-022
Identities = 9/14 (64%), Positives = 10/14 (71%)
Frame = -1 / -2
Query: 319 GGLVQRLVHHPVRA 278
G V LVHHPVR+
Sbjct: 75 GVAVLGLVHHPVRS 34
>gb|BJ462834.1|BJ462834 BJ462834 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags24j18 5', mRNA sequence
Length = 683
Score = 177 bits (381), Expect(3) = 4e-071
Identities = 65/101 (64%), Positives = 84/101 (83%)
Frame = +2 / +3
Query: 551 IKSYLYQILRGVAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHE 730
+K +YQ+ +GVA+CH VLHRDLKP NLL+DR+T ALK+AD GL+RAF +P++ +THE
Sbjct: 381 VKILMYQLCKGVAFCHGRGVLHRDLKPHNLLMDRKTMALKIADLGLSRAFTVPLKKYTHE 560
Query: 731 VVTLWYRAPEILLGARQYSTPVDVWSVGCIFAEMVNQKPLF 853
++TLWYRAPE+LLGA YSTPVD+WSVGCIFAE++ LF
Sbjct: 561 ILTLWYRAPEVLLGATHYSTPVDMWSVGCIFAELITTTALF 683
Score = 96.4 bits (204), Expect(3) = 4e-071
Identities = 38/60 (63%), Positives = 50/60 (83%)
Frame = +2 / +3
Query: 239 AMEQYEKVEKIGEGTYGVVYKALDKATNETIALKKIRLEQEDEGVPSTAIREISLLKEMN 418
AM+ YEK+EK+GEGTYG VYKA +KAT +ALKK RL ++DEGVP TA+RE+SLL+ ++
Sbjct: 45 AMDLYEKLEKVGEGTYGKVYKAREKATGRIVALKKTRLPEDDEGVPPTALREVSLLRMLS 224
Score = 95.9 bits (203), Expect(3) = 4e-032
Identities = 45/87 (51%), Positives = 53/87 (60%)
Frame = -2 / -2
Query: 828 SAKIQPTDHTSTGVEYCLAPSRISGALYHNVTTS*VNVRTGIPNALAKPKSASFSALVRR 649
SA +QPTDH STGVE C+AP R SGALYH V S V G A P+SA A+V R
Sbjct: 658 SANMQPTDHMSTGVE*CVAPRRTSGALYHRVRISCVYFLRGTVKARLSPRSAILRAMVLR 479
Query: 648 SINKF*GFKSR*RTL*EWQYATPRSIW 568
S+++ G +SR RT WQ ATP W
Sbjct: 478 SMSRLCGLRSRCRTPRPWQKATPLQSW 398
Score = 52.4 bits (108), Expect(3) = 4e-032
Identities = 27/54 (50%), Positives = 30/54 (55%)
Frame = -2 / -2
Query: 399 EISRMAVDGTPSSSCSRRIFXXXXXXXXXXXXXLYTTPYVPSPIFSTFSYCSIA 238
E S AV GTPSSS RR+F LYT P VPSP FS+FS S+A
Sbjct: 205 ETSLSAVGGTPSSSSGRRVFLSATIRPVAFSRALYTFP*VPSPTFSSFS*RSMA 44
Score = 34.5 bits (69), Expect(3) = 4e-071
Identities = 12/16 (75%), Positives = 15/16 (93%)
Frame = +2 / +3
Query: 467 IYLVFEYLDLDLKKFM 514
+YLVFEY+D DLKKF+
Sbjct: 291 LYLVFEYMDTDLKKFI 338
Score = 28.6 bits (56), Expect(3) = 4e-032
Identities = 12/14 (85%), Positives = 12/14 (85%)
Frame = -2 / -2
Query: 513 MNFLRSRSRYSKTR 472
MNFLRS S YSKTR
Sbjct: 337 MNFLRSVSMYSKTR 296
>gb|BI951177.1|BI951177 HVSMEl0024N20f Hordeum vulgare spike EST library HVcDNA0012
(Fusarium infected) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEl0024N20f, mRNA sequence
Length = 876
Score = 159 bits (342), Expect(3) = 4e-070
Identities = 63/117 (53%), Positives = 81/117 (69%)
Frame = +2 / +2
Query: 578 RGVAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAP 757
RG + VL L + LKL DFGLARAFGIPV TF++EVVTLWYRAP
Sbjct: 182 RGTWIQMASAVLLNQLPSSHSCTSSSRGILKLGDFGLARAFGIPVNTFSNEVVTLWYRAP 361
Query: 758 EILLGARQYSTPVDVWSVGCIFAEMVNQKPLFPGDSEIDELFKIFRILGTPNEQSWP 928
++LLG+R Y+T +D+WS GCI AEM +PLFPG + D++ +IFRI+GTP E++WP
Sbjct: 362 DVLLGSRTYNTSIDIWSAGCIMAEMFTGRPLFPGTTNEDQIVRIFRIMGTPTERTWP 532
Score = 89.0 bits (188), Expect(3) = 4e-070
Identities = 34/53 (64%), Positives = 45/53 (84%)
Frame = +2 / +1
Query: 362 DEGVPSTAIREISLLKEMNHGNIVRLHDVVHSEKRIYLVFEYLDLDLKKFMDS 520
+EG PSTAIREISL+KE+ H NIV LHDV+H+E ++ LVFEY+ DLK++MD+
Sbjct: 40 EEGTPSTAIREISLMKELKHENIVGLHDVIHTENKLMLVFEYMGGDLKRYMDT 198
Score = 73.9 bits (155), Expect(3) = 8e-029
Identities = 35/55 (63%), Positives = 37/55 (67%)
Frame = -2 / -1
Query: 831 ISAKIQPTDHTSTGVEYCLAPSRISGALYHNVTTS*VNVRTGIPNALAKPKSASF 667
ISA +QP DH S V Y PSR SGA Y VTTS NV TGIPNA A+PKS SF
Sbjct: 435 ISAMMQPADHISMLVLYVRLPSRTSGARYQRVTTSFENVLTGIPNARARPKSPSF 271
Score = 64.3 bits (134), Expect(3) = 8e-029
Identities = 30/52 (57%), Positives = 32/52 (61%)
Frame = -2 / -2
Query: 516 SMNFLRSRSRYSKTRYMRFSLWTTSCNLTMLPWFISLRREISRMAVDGTPSS 361
SM RS YSKT FS+W TSC+ TM S REISRMAVDG PSS
Sbjct: 194 SMYLFRSPPMYSKTSMSLFSVWITSCSPTMFSCLSSFIREISRMAVDGVPSS 39
Score = 56.5 bits (117), Expect(3) = 4e-070
Identities = 20/50 (40%), Positives = 32/50 (64%)
Frame = +2 / +3
Query: 926 PGVSCLPDFKTAFPRWQAQDLATVVPNLDPAGLDLLSKMLRYEPSKRITA 1075
PG++ P++K F + QDL ++ +DP G+DLL +ML+ P RI+A
Sbjct: 531 PGITQFPEYKPTFHMYATQDLRDILQTIDPTGIDLLQRMLQLRPELRISA 680
Score = 33.1 bits (66), Expect(3) = 8e-029
Identities = 21/51 (41%), Positives = 26/51 (50%)
Frame = -2 / -3
Query: 1077 LAVILLLGSYRSILERRSNPAGSRFGTTVARS*ACHLGKAVLKSGKQLTPG 925
+A+IL G SIL RS P GS RS* ++ K L SG + PG
Sbjct: 682 VALILNSGRS*SILCNRSMPVGSIVWRISRRS*VAYIWKVGLYSGNWVMPG 530
>gb|BU979997.1|BU979997 HA18C17r HA Hordeum vulgare subsp. vulgare cDNA clone HA18C17
5-PRIME, mRNA sequence
Length = 524
Score = 258 bits (557), Expect = 7e-068
Identities = 103/123 (83%), Positives = 114/123 (92%)
Frame = +2 / +2
Query: 749 RAPEILLGARQYSTPVDVWSVGCIFAEMVNQKPLFPGDSEIDELFKIFRILGTPNEQSWP 928
RAPEILLGARQYSTPVDVWSVGCIFAEMVNQKPLFPGDSEIDELFKIFRI+GTPNE++WP
Sbjct: 8 RAPEILLGARQYSTPVDVWSVGCIFAEMVNQKPLFPGDSEIDELFKIFRIMGTPNEETWP 187
Query: 929 GVSCLPDFKTAFPRWQAQDLATVVPNLDPAGLDLLSKMLRYEPSKRITARQALEHEYFKD 1108
GVS LPD+K+AFP+W + DLATVVP L+P GLDLLSKML +PS+RI AR ALEHEYFKD
Sbjct: 188 GVSSLPDYKSAFPKWPSVDLATVVPTLEPLGLDLLSKMLCLDPSRRINARTALEHEYFKD 367
Query: 1109 LEV 1117
L+V
Sbjct: 368 LDV 376
Score = 171 bits (368), Expect = 8e-042
Identities = 81/123 (65%), Positives = 87/123 (70%)
Frame = -2 / -3
Query: 1116 TSRSLKYSCSSACLAVILLLGSYRSILERRSNPAGSRFGTTVARS*ACHLGKAVLKSGKQ 937
TSRSLKYSCS A A+ILLLGS +SILERRS+P GS GTTVARS HLGKA L SG +
Sbjct: 375 TSRSLKYSCSRAVRALILLLGSKQSILERRSSPKGSSVGTTVARSTDGHLGKADL*SGNE 196
Query: 936 LTPGQLCSFGVPXXXXXXXXXXXXXXXXXSGFWFTISAKIQPTDHTSTGVEYCLAPSRIS 757
TPGQ+ S GVP GF FTISAK+QPTDHTSTGVEYCLAP RIS
Sbjct: 195 ETPGQVSSLGVPIILKILKSSSISESPGNKGF*FTISAKMQPTDHTSTGVEYCLAPRRIS 16
Query: 756 GAL 748
GAL
Sbjct: 15 GAL 7
Score = 126 bits (269), Expect = 3e-028
Identities = 52/121 (42%), Positives = 79/121 (65%)
Frame = -1 / -2
Query: 1117 HFKVLEVLMLKCLPRCDSFAWLVSKHFREKVQPSRVKIWDYCCQVLSLPPGESCLEVRQT 938
H ++LEVL+L+ DS AW+ ++HFREK++ R + W++ C++ P GES VR
Sbjct: 376 HVQILEVLVLEGGSGVDSSAWI*AEHFREKIKSQRFECWNHSCKIHGRPLGES*FVVR*R 197
Query: 937 TDSWPTLLIRCT*YPEYLKKFVDLRIARE*WLLVHHFRKDTAHRPHINWCGILPRSKQNF 758
++WP IR E L++F++LRI R+* L+HHF K+ +RPHIN ILP +++NF
Sbjct: 196 RNTWPGFFIRSAHNSENLEEFINLRITRK*RFLIHHFSKNATNRPHINRGRILPCTQKNF 17
Query: 757 W 755
W
Sbjct: 16 W 14
>gb|BQ462912.1|BQ462912 HI02G10r HI Hordeum vulgare subsp. vulgare cDNA clone HI02G10
5-PRIME, mRNA sequence
Length = 667
Score = 144 bits (308), Expect(3) = 3e-065
Identities = 51/80 (63%), Positives = 69/80 (86%)
Frame = +2 / +3
Query: 548 LIKSYLYQILRGVAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTH 727
++KS+LYQ+ +G+A+CH H VLHRDLKPQNLL+D+ LK+AD GL+RAF +P++++TH
Sbjct: 426 VVKSFLYQLCKGIAHCHGHGVLHRDLKPQNLLVDKEKMILKIADLGLSRAFTVPMKSYTH 605
Query: 728 EVVTLWYRAPEILLGARQYS 787
E+VTLWYRAPE+LLGA YS
Sbjct: 606 EIVTLWYRAPEVLLGATHYS 665
Score = 107 bits (229), Expect(3) = 3e-065
Identities = 42/59 (71%), Positives = 52/59 (88%)
Frame = +2 / +3
Query: 233 GHAMEQYEKVEKIGEGTYGVVYKALDKATNETIALKKIRLEQEDEGVPSTAIREISLLK 409
G AME+YEK+EK+GEGTYG VYKA+DKAT + +ALKK RLE +DEG+P TA+REISLL+
Sbjct: 66 GSAMEKYEKLEKVGEGTYGKVYKAMDKATGQVVALKKTRLEMDDEGIPPTALREISLLR 242
Score = 74.8 bits (157), Expect(3) = 9e-031
Identities = 38/70 (54%), Positives = 44/70 (62%)
Frame = -2 / -1
Query: 789 VEYCLAPSRISGALYHNVTTS*VNVRTGIPNALAKPKSASFSALVRRSINKF*GFKSR*R 610
VE C+APS SGALY +VT S V + G AL P+SA FS + S N+F GFKSR*R
Sbjct: 667 VE*CVAPSSTSGALYQSVTISWV*LFIGTVKALLNPRSAIFSIIFSLSTNRFWGFKSR*R 488
Query: 609 TL*EWQYATP 580
T WQ A P
Sbjct: 487 TPCPWQCAIP 458
Score = 70.3 bits (147), Expect(3) = 9e-031
Identities = 33/58 (56%), Positives = 36/58 (62%)
Frame = -2 / -1
Query: 405 RREISRMAVDGTPSSSCSRRIFXXXXXXXXXXXXXLYTTPYVPSPIFSTFSYCSIACP 232
RREISR AV G PSSS SRR+F LYT P VPSP FS+FSY S+A P
Sbjct: 238 RREISRSAVGGIPSSSISRRVFLSATTWPVALSIALYTLP*VPSPTFSSFSYFSMALP 65
Score = 36.8 bits (74), Expect(3) = 3e-065
Identities = 13/18 (72%), Positives = 17/18 (94%)
Frame = +2 / +3
Query: 467 IYLVFEYLDLDLKKFMDS 520
+YLVFE+LD DLKKF+D+
Sbjct: 333 LYLVFEFLDTDLKKFVDA 386
Score = 27.2 bits (53), Expect(3) = 9e-031
Identities = 11/17 (64%), Positives = 14/17 (82%)
Frame = -1 / -3
Query: 520 GVHELLEVQIQVLEDKV 470
GV ELLEV ++ LED+V
Sbjct: 386 GVDELLEVSVKELEDEV 336
>gb|CA017820.1|CA017820 HV06G03r HV Hordeum vulgare subsp. vulgare cDNA clone HV06G03
5-PRIME, mRNA sequence
Length = 500
Score = 233 bits (503), Expect(2) = 4e-065
Identities = 86/140 (61%), Positives = 113/140 (80%)
Frame = +2 / +3
Query: 533 AKNPTLIKSYLYQILRGVAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPV 712
A+ +K +YQ+ +GVA+CH VLHRDLKP NLL+DR+T ALK+AD GL+RAF +P+
Sbjct: 3 ARGAHTVKILMYQLCKGVAFCHGRGVLHRDLKPHNLLMDRKTMALKIADLGLSRAFTVPL 182
Query: 713 RTFTHEVVTLWYRAPEILLGARQYSTPVDVWSVGCIFAEMVNQKPLFPGDSEIDELFKIF 892
+ +THE++TLWYRAPE+LLGA YSTPVD+WSVGCIFAE++ LFPGDSE+ +L IF
Sbjct: 183 KKYTHEILTLWYRAPEVLLGATHYSTPVDMWSVGCIFAELITTTALFPGDSEVQQLLHIF 362
Query: 893 RILGTPNEQSWPGVSCLPDF 952
++LGTPNE+ WPGV LP++
Sbjct: 363 QLLGTPNEEVWPGVGKLPNW 422
Score = 95.9 bits (203), Expect(2) = 7e-021
Identities = 45/87 (51%), Positives = 53/87 (60%)
Frame = -2 / -2
Query: 828 SAKIQPTDHTSTGVEYCLAPSRISGALYHNVTTS*VNVRTGIPNALAKPKSASFSALVRR 649
SA +QPTDH STGVE C+AP R SGALYH V S V G A P+SA A+V R
Sbjct: 298 SANMQPTDHMSTGVE*CVAPRRTSGALYHRVRISCVYFLRGTVKARLSPRSAILRAMVLR 119
Query: 648 SINKF*GFKSR*RTL*EWQYATPRSIW 568
S+++ G +SR RT WQ ATP W
Sbjct: 118 SMSRLCGLRSRCRTPRPWQKATPLQSW 38
Score = 36.3 bits (73), Expect(2) = 4e-065
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = +2 / +3
Query: 962 FPRWQAQDLATVVPNLDPAGLDLL 1033
+P+W L++V+P+LD G+DLL
Sbjct: 429 YPQWNVSKLSSVIPSLDAVGIDLL 500
Score = 25.4 bits (49), Expect(2) = 7e-021
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = -2 / -2
Query: 945 GKQLTPGQLCSFGVP 901
G TPGQ SFGVP
Sbjct: 415 GSLPTPGQTSSFGVP 371
>gb|BQ471416.1|BQ471416 HV02F22r HV Hordeum vulgare subsp. vulgare cDNA clone HV02F22
5-PRIME, mRNA sequence
Length = 495
Score = 233 bits (503), Expect(2) = 4e-064
Identities = 86/140 (61%), Positives = 113/140 (80%)
Frame = +2 / +3
Query: 533 AKNPTLIKSYLYQILRGVAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPV 712
A+ +K +YQ+ +GVA+CH VLHRDLKP NLL+DR+T ALK+AD GL+RAF +P+
Sbjct: 3 ARGAHTVKILMYQLCKGVAFCHGRGVLHRDLKPHNLLMDRKTMALKIADLGLSRAFTVPL 182
Query: 713 RTFTHEVVTLWYRAPEILLGARQYSTPVDVWSVGCIFAEMVNQKPLFPGDSEIDELFKIF 892
+ +THE++TLWYRAPE+LLGA YSTPVD+WSVGCIFAE++ LFPGDSE+ +L IF
Sbjct: 183 KKYTHEILTLWYRAPEVLLGATHYSTPVDMWSVGCIFAELITTTALFPGDSEVQQLLHIF 362
Query: 893 RILGTPNEQSWPGVSCLPDF 952
++LGTPNE+ WPGV LP++
Sbjct: 363 QLLGTPNEEVWPGVGKLPNW 422
Score = 95.9 bits (203), Expect(2) = 7e-021
Identities = 45/87 (51%), Positives = 53/87 (60%)
Frame = -2 / -3
Query: 828 SAKIQPTDHTSTGVEYCLAPSRISGALYHNVTTS*VNVRTGIPNALAKPKSASFSALVRR 649
SA +QPTDH STGVE C+AP R SGALYH V S V G A P+SA A+V R
Sbjct: 298 SANMQPTDHMSTGVE*CVAPRRTSGALYHRVRISCVYFLRGTVKARLSPRSAILRAMVLR 119
Query: 648 SINKF*GFKSR*RTL*EWQYATPRSIW 568
S+++ G +SR RT WQ ATP W
Sbjct: 118 SMSRLCGLRSRCRTPRPWQKATPLQSW 38
Score = 32.7 bits (65), Expect(2) = 4e-064
Identities = 9/22 (40%), Positives = 16/22 (72%)
Frame = +2 / +3
Query: 962 FPRWQAQDLATVVPNLDPAGLD 1027
+P+W L++V+P+LD G+D
Sbjct: 429 YPQWNVSKLSSVIPSLDAVGID 494
Score = 25.4 bits (49), Expect(2) = 7e-021
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = -2 / -3
Query: 945 GKQLTPGQLCSFGVP 901
G TPGQ SFGVP
Sbjct: 415 GSLPTPGQTSSFGVP 371
>gb|BJ469039.1|BJ469039 BJ469039 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal12l17 5', mRNA sequence
Length = 602
Score = 146 bits (313), Expect(3) = 1e-061
Identities = 52/81 (64%), Positives = 70/81 (86%)
Frame = +2 / +2
Query: 548 LIKSYLYQILRGVAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTH 727
++KS+LYQ+ +G+A+CH H VLHRDLKPQNLL+D+ LK+AD GL+RAF +P++++TH
Sbjct: 359 VVKSFLYQLCKGIAHCHGHGVLHRDLKPQNLLVDKEKMILKIADLGLSRAFTVPMKSYTH 538
Query: 728 EVVTLWYRAPEILLGARQYST 790
E+VTLWYRAPE+LLGA YST
Sbjct: 539 EIVTLWYRAPEVLLGATHYST 601
Score = 93.2 bits (197), Expect(3) = 1e-061
Identities = 36/51 (70%), Positives = 45/51 (88%)
Frame = +2 / +2
Query: 257 KVEKIGEGTYGVVYKALDKATNETIALKKIRLEQEDEGVPSTAIREISLLK 409
K+EK+GEGTYG VYKA+DKAT + +ALKK RLE +DEG+P TA+REISLL+
Sbjct: 23 KLEKVGEGTYGKVYKAMDKATGQVVALKKTRLEMDDEGIPPTALREISLLR 175
Score = 74.8 bits (157), Expect(3) = 1e-026
Identities = 38/70 (54%), Positives = 44/70 (62%)
Frame = -2 / -3
Query: 789 VEYCLAPSRISGALYHNVTTS*VNVRTGIPNALAKPKSASFSALVRRSINKF*GFKSR*R 610
VE C+APS SGALY +VT S V + G AL P+SA FS + S N+F GFKSR*R
Sbjct: 600 VE*CVAPSSTSGALYQSVTISWV*LFIGTVKALLNPRSAIFSIIFSLSTNRFWGFKSR*R 421
Query: 609 TL*EWQYATP 580
T WQ A P
Sbjct: 420 TPCPWQCAIP 391
Score = 56.5 bits (117), Expect(3) = 1e-026
Identities = 27/49 (55%), Positives = 29/49 (59%)
Frame = -2 / -3
Query: 405 RREISRMAVDGTPSSSCSRRIFXXXXXXXXXXXXXLYTTPYVPSPIFST 259
RREISR AV G PSSS SRR+F LYT P VPSP FS+
Sbjct: 171 RREISRSAVGGIPSSSISRRVFLSATTWPVALSIALYTLP*VPSPTFSS 25
Score = 36.8 bits (74), Expect(3) = 1e-061
Identities = 13/18 (72%), Positives = 17/18 (94%)
Frame = +2 / +2
Query: 467 IYLVFEYLDLDLKKFMDS 520
+YLVFE+LD DLKKF+D+
Sbjct: 266 LYLVFEFLDTDLKKFVDA 319
Score = 27.2 bits (53), Expect(3) = 1e-026
Identities = 11/17 (64%), Positives = 14/17 (82%)
Frame = -1 / -2
Query: 520 GVHELLEVQIQVLEDKV 470
GV ELLEV ++ LED+V
Sbjct: 319 GVDELLEVSVKELEDEV 269
>gb|AY167561.1| Hordeum vulgare subsp. vulgare GAMYB-binding protein (kgm) mRNA,
complete cds
Length = 2320
Score = 106 bits (227), Expect(6) = 2e-055
Identities = 39/71 (54%), Positives = 53/71 (74%)
Frame = +2 / +1
Query: 719 FTHEVVTLWYRAPEILLGARQYSTPVDVWSVGCIFAEMVNQKPLFPGDSEIDELFKIFRI 898
+T V T WYRAPE+LL + YS+ VD+W++G I AE+ + +PLFPG SE DE++KI I
Sbjct: 922 YTEYVSTRWYRAPEVLLQSSVYSSAVDMWAMGAIIAELFSHRPLFPGSSEADEIYKICNI 1101
Query: 899 LGTPNEQSWPG 931
LGTPN+ +W G
Sbjct: 1102 LGTPNQHTWAG 1134
Score = 50.6 bits (104), Expect(6) = 2e-055
Identities = 18/45 (40%), Positives = 30/45 (66%)
Frame = +2 / +1
Query: 386 IREISLLKEMNHGNIVRLHDVVHSEKRIYLVFEYLDLDLKKFMDS 520
+RE+ L+ MNH NIV+L +V+ ++ VFEY++ +L + M S
Sbjct: 601 LREVKSLRRMNHPNIVKLKEVIRENDMLFFVFEYMECNLYQLMKS 735
Score = 46.0 bits (94), Expect(6) = 2e-055
Identities = 14/36 (38%), Positives = 29/36 (80%)
Frame = +2 / +1
Query: 242 MEQYEKVEKIGEGTYGVVYKALDKATNETIALKKIR 349
ME+Y + ++G+GT+G V++A++K + E +A+KK++
Sbjct: 460 MERYNIITEVGDGTFGSVWRAINKESGEVVAIKKMK 567
Score = 41.8 bits (85), Expect(6) = 2e-055
Identities = 13/36 (36%), Positives = 25/36 (69%)
Frame = +2 / +1
Query: 545 TLIKSYLYQILRGVAYCHSHRVLHRDLKPQNLLIDR 652
T I+++ +Q+ + +++ H HRDLKP+NLL+ +
Sbjct: 757 TEIRNWCFQVFQALSHMHQRGYFHRDLKPENLLVTK 864
Score = 40.9 bits (83), Expect(6) = 2e-055
Identities = 17/48 (35%), Positives = 30/48 (62%)
Frame = +2 / +1
Query: 962 FPRWQAQDLATVVPNLDPAGLDLLSKMLRYEPSKRITARQALEHEYFK 1105
FP+ + +L+ VVP L+L+S + ++P KR TA + L+H +F+
Sbjct: 1168 FPQSGSINLSEVVPTASEDALNLISWLCSWDPRKRPTAVEVLQHPFFQ 1311
Score = 22.6 bits (43), Expect(6) = 2e-055
Identities = 8/10 (80%), Positives = 10/10 (100%)
Frame = +2 / +1
Query: 665 LKLADFGLAR 694
+K+ADFGLAR
Sbjct: 871 IKVADFGLAR 900
>gb|BG365431.1|BG365431 HVSMEi0002K12f Hordeum vulgare 20 DAP spike EST library HVcDNA0010
(20 DAP) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEi0002K12f, mRNA sequence
Length = 769
Score = 181 bits (390), Expect(2) = 3e-053
Identities = 72/114 (63%), Positives = 94/114 (82%)
Frame = +2 / +3
Query: 536 KNPTLIKSYLYQILRGVAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVR 715
KN ++KS+LYQILRG+AYCHSHRVL RDLKPQNLLIDRR N LKLAD+GLA+A+G+P +
Sbjct: 75 KNHHIVKSFLYQILRGIAYCHSHRVLDRDLKPQNLLIDRRANCLKLADYGLAKAYGVPEK 254
Query: 716 TFTHEVVTLWYRAPEILLGARQYSTPVDVWSVGCIFAEMVNQKPLFPGDSEIDE 877
TFTHEVVTLW R+PEI+LGAR+ + P +VW+ G + +M + +P G++ I+E
Sbjct: 255 TFTHEVVTLWSRSPEIVLGARRSTAPENVWTGGNM*TKMESGEPKRAGEAGIEE 416
Score = 105 bits (224), Expect(2) = 7e-030
Identities = 54/93 (58%), Positives = 59/93 (63%)
Frame = -2 / -1
Query: 813 PTDHTSTGVEYCLAPSRISGALYHNVTTS*VNVRTGIPNALAKPKSASFSALVRRSINKF 634
P HT +G LAPS ISG L HNVTTS*VNV +G P ALA P SASF L RRSI++F
Sbjct: 352 PPVHTFSGAVLRLAPSTISGDLLHNVTTS*VNVFSGTPYALANP*SASFKQLARRSISRF 173
Query: 633 *GFKSR*RTL*EWQYATPRSIW*RYDLIKVGFL 535
G +S T EWQ A PR IW R DL FL
Sbjct: 172 WGLRSLSSTRCEWQ*AMPRRIWYRKDLTMWWFL 74
Score = 48.3 bits (99), Expect(2) = 3e-053
Identities = 19/22 (86%), Positives = 20/22 (90%)
Frame = +2 / +3
Query: 467 IYLVFEYLDLDLKKFMDSCPEF 532
IYLVFEYLDLDLKK MDS P+F
Sbjct: 9 IYLVFEYLDLDLKKHMDSSPDF 74
Score = 46.0 bits (94), Expect(2) = 7e-030
Identities = 19/21 (90%), Positives = 20/21 (95%)
Frame = -2 / -1
Query: 528 SGQESMNFLRSRSRYSKTRYM 466
SG+ESM FLRSRSRYSKTRYM
Sbjct: 70 SGEESMCFLRSRSRYSKTRYM 8
>gb|BU999074.1|BU999074 HI13C08r HI Hordeum vulgare subsp. vulgare cDNA clone HI13C08
5-PRIME, mRNA sequence
Length = 552
Score = 100 bits (214), Expect(3) = 7e-052
Identities = 39/67 (58%), Positives = 47/67 (70%)
Frame = +2 / +1
Query: 635 NLLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGARQYSTPVDVWSVG 814
N L+ LKL DFGLAR FG P R FTH+V WYRAPE+L G +QY + VDVW+ G
Sbjct: 352 NNLLIGAEGQLKLGDFGLARIFGSPERNFTHQVFARWYRAPELLFGTKQYGSAVDVWAAG 531
Query: 815 CIFAEMV 835
CIFAE++
Sbjct: 532 CIFAELL 552
Score = 85.8 bits (181), Expect(3) = 7e-052
Identities = 37/73 (50%), Positives = 52/73 (71%)
Frame = +2 / +1
Query: 287 GVVYKALDKATNETIALKKIRLEQEDEGVPSTAIREISLLKEMNHGNIVRLHDVVHSEKR 466
GVV+KALD T ET+A+K+IRL + EGV TA+REI LLKE+ NI+ L D +
Sbjct: 10 GVVFKALDTKTGETVAIKRIRLGKYKEGVNFTALREIKLLKELKDPNIIELIDAFPYKGN 189
Query: 467 IYLVFEYLDLDLK 505
++LVFE+++ DL+
Sbjct: 190 LHLVFEFMETDLE 228
Score = 57.0 bits (118), Expect(3) = 7e-052
Identities = 21/36 (58%), Positives = 28/36 (77%)
Frame = +2 / +1
Query: 539 NPTLIKSYLYQILRGVAYCHSHRVLHRDLKPQNLLI 646
+P IKSY+ +L+G+A+CH VLHRD+KP NLLI
Sbjct: 259 SPADIKSYIQMMLKGLAFCHKKWVLHRDMKPNNLLI 366
>gb|BG416044.1|BG416044 HVSMEk0009J02f Hordeum vulgare testa/pericarp EST library
HVcDNA0013 (normal) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEk0009J02f, mRNA sequence
Length = 947
Score = 103 bits (219), Expect(5) = 4e-051
Identities = 37/68 (54%), Positives = 49/68 (72%)
Frame = +2 / +2
Query: 722 THEVVTLWYRAPEILLGARQYSTPVDVWSVGCIFAEMVNQKPLFPGDSEIDELFKIFRIL 901
T VVTLWYR PE+LLGA Y VD+WS GCI AE+ KP+ PG +E+++L KIF++
Sbjct: 542 TSRVVTLWYRPPELLLGATNYGVAVDLWSTGCILAELYAGKPIMPGRTEVEQLHKIFKLC 721
Query: 902 GTPNEQSW 925
G+P+E W
Sbjct: 722 GSPSEDYW 745
Score = 68.4 bits (143), Expect(5) = 4e-051
Identities = 28/71 (39%), Positives = 45/71 (63%)
Frame = +2 / +2
Query: 245 EQYEKVEKIGEGTYGVVYKALDKATNETIALKKIRLEQEDEGVPSTAIREISLLKEMNHG 424
E +EK++KIG+GTY VY+A D + +ALKK+R + + REI +L+ ++H
Sbjct: 62 ESFEKLDKIGQGTYSNVYRARDLEKQKIVALKKVRFDNLEPESVKFMAREILILRRLDHP 241
Query: 425 NIVRLHDVVHS 457
NI++L +V S
Sbjct: 242 NIIKLEGLVTS 274
Score = 57.9 bits (120), Expect(5) = 4e-051
Identities = 20/35 (57%), Positives = 27/35 (77%)
Frame = +2 / +2
Query: 551 IKSYLYQILRGVAYCHSHRVLHRDLKPQNLLIDRR 655
+K Y+ Q+LRG+ +CHS +LHRD+K NLLID R
Sbjct: 371 VKCYMQQLLRGLEHCHSRHILHRDIKGSNLLIDNR 475
Score = 24.0 bits (46), Expect(5) = 4e-051
Identities = 8/12 (66%), Positives = 11/12 (91%)
Frame = +2 / +2
Query: 467 IYLVFEYLDLDL 502
+YLVFEY++ DL
Sbjct: 290 LYLVFEYMEHDL 325
Score = 23.1 bits (44), Expect(5) = 4e-051
Identities = 9/12 (75%), Positives = 10/12 (83%)
Frame = +2 / +2
Query: 665 LKLADFGLARAF 700
LK+ADFGLA F
Sbjct: 482 LKIADFGLASFF 517
>gb|BF258979.3|BF258979 HVSMEf0017E08f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEf0017E08f, mRNA sequence
Length = 790
Score = 99.6 bits (211), Expect(5) = 1e-048
Identities = 39/69 (56%), Positives = 55/69 (79%)
Frame = +2 / +1
Query: 251 YEKVEKIGEGTYGVVYKALDKATNETIALKKIRLEQEDEGVPSTAIREISLLKEMNHGNI 430
+EK+E+IGEGTYG VY A + TNE +ALKKIR++ E EG P TAIREI +LK+++H N+
Sbjct: 121 FEKLEQIGEGTYGQVYMAKETETNEIVALKKIRMDNEREGFPITAIREIKILKKLHHQNV 300
Query: 431 VRLHDVVHS 457
++L ++V S
Sbjct: 301 IQLKEIVTS 327
Score = 58.8 bits (122), Expect(5) = 1e-048
Identities = 21/41 (51%), Positives = 30/41 (73%)
Frame = +2 / +1
Query: 722 THEVVTLWYRAPEILLGARQYSTPVDVWSVGCIFAEMVNQK 844
T+ V+TLWYR P++LLG+ +Y D+WS G IFAE+ + K
Sbjct: 640 TNRVITLWYRPPDLLLGSTRYGPTCDMWSEGWIFAELFHGK 762
Score = 55.1 bits (114), Expect(5) = 1e-048
Identities = 21/37 (56%), Positives = 27/37 (72%)
Frame = +2 / +1
Query: 551 IKSYLYQILRGVAYCHSHRVLHRDLKPQNLLIDRRTN 661
IK Y+ Q+L G+ YCH ++VLHRD+K NLLID N
Sbjct: 469 IKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGN 579
Score = 28.1 bits (55), Expect(5) = 1e-048
Identities = 11/12 (91%), Positives = 12/12 (100%)
Frame = +2 / +1
Query: 665 LKLADFGLARAF 700
LKLADFGLAR+F
Sbjct: 580 LKLADFGLARSF 615
Score = 26.7 bits (52), Expect(5) = 1e-048
Identities = 10/17 (58%), Positives = 12/17 (70%)
Frame = +2 / +1
Query: 467 IYLVFEYLDLDLKKFMD 517
IY+VFEY+D DL D
Sbjct: 388 IYMVFEYMDHDLTGLAD 438
>gb|CA030163.1|CA030163 HX06E08r HX Hordeum vulgare subsp. vulgare cDNA clone HX06E08
5-PRIME, mRNA sequence
Length = 598
Score = 107 bits (229), Expect(3) = 5e-047
Identities = 42/59 (71%), Positives = 52/59 (88%)
Frame = +2 / +2
Query: 233 GHAMEQYEKVEKIGEGTYGVVYKALDKATNETIALKKIRLEQEDEGVPSTAIREISLLK 409
G AME+YEK+EK+GEGTYG VYKA+DKAT + +ALKK RLE +DEG+P TA+REISLL+
Sbjct: 95 GSAMEKYEKLEKVGEGTYGKVYKAMDKATGQVVALKKTRLEMDDEGIPPTALREISLLR 271
Score = 82.6 bits (174), Expect(3) = 5e-047
Identities = 29/48 (60%), Positives = 40/48 (83%)
Frame = +2 / +2
Query: 548 LIKSYLYQILRGVAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLA 691
++KS+LYQ+ +G+A+CH H VLHRDLKPQNLL+D+ LK+AD GL+
Sbjct: 455 VVKSFLYQLCKGIAHCHGHGVLHRDLKPQNLLVDKEKMILKIADLGLS 598
Score = 70.3 bits (147), Expect(3) = 2e-021
Identities = 33/58 (56%), Positives = 36/58 (62%)
Frame = -2 / -2
Query: 405 RREISRMAVDGTPSSSCSRRIFXXXXXXXXXXXXXLYTTPYVPSPIFSTFSYCSIACP 232
RREISR AV G PSSS SRR+F LYT P VPSP FS+FSY S+A P
Sbjct: 267 RREISRSAVGGIPSSSISRRVFLSATTWPVALSIALYTLP*VPSPTFSSFSYFSMALP 94
Score = 43.2 bits (88), Expect(3) = 2e-021
Identities = 20/35 (57%), Positives = 23/35 (65%)
Frame = -2 / -2
Query: 684 PKSASFSALVRRSINKF*GFKSR*RTL*EWQYATP 580
P+SA FS + S N+F GFKSR*RT WQ A P
Sbjct: 591 PRSAIFSIIFSLSTNRFWGFKSR*RTPCPWQCAIP 487
Score = 36.8 bits (74), Expect(3) = 5e-047
Identities = 13/18 (72%), Positives = 17/18 (94%)
Frame = +2 / +2
Query: 467 IYLVFEYLDLDLKKFMDS 520
+YLVFE+LD DLKKF+D+
Sbjct: 362 LYLVFEFLDTDLKKFVDA 415
Score = 27.2 bits (53), Expect(3) = 2e-021
Identities = 11/17 (64%), Positives = 14/17 (82%)
Frame = -1 / -1
Query: 520 GVHELLEVQIQVLEDKV 470
GV ELLEV ++ LED+V
Sbjct: 415 GVDELLEVSVKELEDEV 365
>gb|AV915041.1|AV915041 AV915041 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags9j06 5', mRNA sequence
Length = 419
Score = 159 bits (341), Expect(2) = 7e-045
Identities = 59/94 (62%), Positives = 78/94 (82%)
Frame = +2 / +1
Query: 665 LKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGARQYSTPVDVWSVGCIFAEMVNQK 844
LK+ DFGL+R +G P++ +T VVTLWYRAPE+LLGA++YST +D+WS+GCI AE++++K
Sbjct: 136 LKICDFGLSRQYGSPLKPYTQLVVTLWYRAPELLLGAKEYSTAIDMWSLGCIMAELLSKK 315
Query: 845 PLFPGDSEIDELFKIFRILGTPNEQSWPGVSCLP 946
PLF G +ID+L KIFR+LGTPNE WPG S LP
Sbjct: 316 PLFDGKRDIDQLSKIFRMLGTPNEDIWPGYSKLP 417
Score = 42.8 bits (87), Expect(2) = 7e-045
Identities = 15/33 (45%), Positives = 23/33 (69%)
Frame = +2 / +1
Query: 551 IKSYLYQILRGVAYCHSHRVLHRDLKPQNLLID 649
+K + Q+L GV Y H + V+HRDLK N+L++
Sbjct: 25 VKCLMLQLLEGVKYLHDNWVIHRDLKTSNILLN 123
>gb|BQ465498.1|BQ465498 HU03N01r HU Hordeum vulgare subsp. vulgare cDNA clone HU03N01
5-PRIME, mRNA sequence
Length = 606
Score = 107 bits (228), Expect(5) = 1e-044
Identities = 39/65 (60%), Positives = 52/65 (80%)
Frame = +2 / +1
Query: 722 THEVVTLWYRAPEILLGARQYSTPVDVWSVGCIFAEMVNQKPLFPGDSEIDELFKIFRIL 901
T+ V+TLWYR PE+LLG+ +Y VD+WSVGCIFAE++N KP+ PG +E D+L KIF +
Sbjct: 406 TNRVITLWYRPPELLLGSTKYGPAVDMWSVGCIFAELLNGKPILPGKNEPDQLTKIFELC 585
Query: 902 GTPNE 916
GTP+E
Sbjct: 586 GTPDE 600
Score = 55.1 bits (114), Expect(5) = 1e-044
Identities = 21/37 (56%), Positives = 27/37 (72%)
Frame = +2 / +1
Query: 551 IKSYLYQILRGVAYCHSHRVLHRDLKPQNLLIDRRTN 661
IK Y+ Q+L G+ YCH ++VLHRD+K NLLID N
Sbjct: 235 IKCYMKQLLTGLHYCHINQVLHRDIKGSNLLIDNEGN 345
Score = 37.3 bits (75), Expect(5) = 1e-044
Identities = 13/26 (50%), Positives = 22/26 (84%)
Frame = +2 / +1
Query: 380 TAIREISLLKEMNHGNIVRLHDVVHS 457
TAIREI +LK+++H N+++L ++V S
Sbjct: 16 TAIREIKILKKLHHQNVIQLKEIVTS 93
Score = 28.1 bits (55), Expect(5) = 1e-044
Identities = 11/12 (91%), Positives = 12/12 (100%)
Frame = +2 / +1
Query: 665 LKLADFGLARAF 700
LKLADFGLAR+F
Sbjct: 346 LKLADFGLARSF 381
Score = 26.7 bits (52), Expect(5) = 1e-044
Identities = 10/17 (58%), Positives = 12/17 (70%)
Frame = +2 / +1
Query: 467 IYLVFEYLDLDLKKFMD 517
IY+VFEY+D DL D
Sbjct: 154 IYMVFEYMDHDLTGLAD 204
>gb|BJ545230.1|BJ545230 BJ545230 K. Sato unpublished cDNA library, cv. Akashinriki
vegetative stage leaves Hordeum vulgare subsp. vulgare
cDNA clone baak46k05 5', mRNA sequence
Length = 608
Score = 107 bits (228), Expect(3) = 2e-042
Identities = 44/84 (52%), Positives = 57/84 (67%)
Frame = +2 / +3
Query: 665 LKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGARQYSTPVDVWSVGCIFAEMVNQK 844
LK+ DFGLAR + T VVT WYRAPE+LL Y T +DVWSVGCIFAE++ +K
Sbjct: 135 LKICDFGLARTNSSKGQFMTEYVVTRWYRAPELLLCCDNYGTSIDVWSVGCIFAELLGRK 314
Query: 845 PLFPGDSEIDELFKIFRILGTPNE 916
P+FPG +++L I +LGT +E
Sbjct: 315 PIFPGTECLNQLKLIVNVLGTMSE 386
Score = 53.3 bits (110), Expect(3) = 2e-042
Identities = 21/42 (50%), Positives = 29/42 (69%)
Frame = +2 / +3
Query: 986 LATVVPNLDPAGLDLLSKMLRYEPSKRITARQALEHEYFKDL 1111
LA++ P+ P +DLL KML ++P+KRI+ QALEH Y L
Sbjct: 462 LASMYPHAHPLAIDLLQKMLIFDPTKRISVTQALEHPYMSPL 587
Score = 51.5 bits (106), Expect(3) = 2e-042
Identities = 18/30 (60%), Positives = 25/30 (83%)
Frame = +2 / +3
Query: 560 YLYQILRGVAYCHSHRVLHRDLKPQNLLID 649
+L+Q+LRG+ Y HS +LHRDLKP NLL++
Sbjct: 33 FLFQLLRGLKYLHSAEILHRDLKPGNLLVN 122
>gb|CB877262.1|CB877262 HP04C19T HP Hordeum vulgare subsp. vulgare cDNA clone HP04C19
5-PRIME, mRNA sequence
Length = 512
Score = 118 bits (252), Expect(4) = 4e-042
Identities = 43/75 (57%), Positives = 58/75 (77%)
Frame = +2 / +3
Query: 722 THEVVTLWYRAPEILLGARQYSTPVDVWSVGCIFAEMVNQKPLFPGDSEIDELFKIFRIL 901
T+ V+TLWYR PE+LLG+ +Y VD+WSVGCIFAE++N KP+ P +E D+L KIF +
Sbjct: 273 TNRVITLWYRPPELLLGSTKYGPAVDMWSVGCIFAELLNGKPILPXKNEPDQLTKIFELC 452
Query: 902 GTPNEQSWPGVSCLP 946
GTP+E WPGV+ +P
Sbjct: 453 GTPDELIWPGVTKMP 497
Score = 55.1 bits (114), Expect(4) = 4e-042
Identities = 21/37 (56%), Positives = 27/37 (72%)
Frame = +2 / +3
Query: 551 IKSYLYQILRGVAYCHSHRVLHRDLKPQNLLIDRRTN 661
IK Y+ Q+L G+ YCH ++VLHRD+K NLLID N
Sbjct: 102 IKCYMKQLLTGLHYCHINQVLHRDIKGSNLLIDNEGN 212
Score = 28.1 bits (55), Expect(4) = 4e-042
Identities = 11/12 (91%), Positives = 12/12 (100%)
Frame = +2 / +3
Query: 665 LKLADFGLARAF 700
LKLADFGLAR+F
Sbjct: 213 LKLADFGLARSF 248
Score = 26.7 bits (52), Expect(4) = 4e-042
Identities = 10/17 (58%), Positives = 12/17 (70%)
Frame = +2 / +3
Query: 467 IYLVFEYLDLDLKKFMD 517
IY+VFEY+D DL D
Sbjct: 21 IYMVFEYMDHDLTGLAD 71
>gb|BJ473475.1|BJ473475 BJ473475 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal12l17 3', mRNA sequence
Length = 683
Score = 113 bits (241), Expect(2) = 6e-041
Identities = 41/65 (63%), Positives = 53/65 (81%)
Frame = +2 / -3
Query: 758 EILLGARQYSTPVDVWSVGCIFAEMVNQKPLFPGDSEIDELFKIFRILGTPNEQSWPGVS 937
E+LLGA YST VD+WS+GCIFAEMV ++ LFPGDSE+ +L IFR++GTP E+ WPGV+
Sbjct: 681 EVLLGATHYSTGVDIWSIGCIFAEMVRKQALFPGDSELQQLLHIFRLMGTPTEEDWPGVT 502
Query: 938 CLPDF 952
L D+
Sbjct: 501 ALRDW 487
Score = 75.3 bits (158), Expect(2) = 6e-041
Identities = 28/54 (51%), Positives = 40/54 (74%)
Frame = +2 / -3
Query: 962 FPRWQAQDLATVVPNLDPAGLDLLSKMLRYEPSKRITARQALEHEYFKDLEVVQ 1123
FP+W+AQ + VP L+ G+DLLSKML+++P+ RI+A+ ALEH YF L+ Q
Sbjct: 480 FPQWKAQRMTRAVPTLETEGIDLLSKMLQFDPANRISAKAALEHPYFNSLDKSQ 319
>gb|BU986872.1|BU986872 HF13C12r HF Hordeum vulgare subsp. vulgare cDNA clone HF13C12
5-PRIME, mRNA sequence
Length = 671
Score = 107 bits (228), Expect(3) = 9e-041
Identities = 44/84 (52%), Positives = 57/84 (67%)
Frame = +2 / +1
Query: 665 LKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGARQYSTPVDVWSVGCIFAEMVNQK 844
LK+ DFGLAR + T VVT WYRAPE+LL Y T +DVWSVGCIFAE++ +K
Sbjct: 385 LKICDFGLARTNSSKGQFMTEYVVTRWYRAPELLLCCDNYGTSIDVWSVGCIFAELLGRK 564
Query: 845 PLFPGDSEIDELFKIFRILGTPNE 916
P+FPG +++L I +LGT +E
Sbjct: 565 PIFPGTECLNQLKLIVNVLGTMSE 636
Score = 51.5 bits (106), Expect(3) = 9e-041
Identities = 18/30 (60%), Positives = 25/30 (83%)
Frame = +2 / +1
Query: 560 YLYQILRGVAYCHSHRVLHRDLKPQNLLID 649
+L+Q+LRG+ Y HS +LHRDLKP NLL++
Sbjct: 283 FLFQLLRGLKYLHSAEILHRDLKPGNLLVN 372
Score = 47.3 bits (97), Expect(3) = 9e-041
Identities = 21/72 (29%), Positives = 40/72 (55%)
Frame = +2 / +1
Query: 287 GVVYKALDKATNETIALKKIRLEQEDEGVPSTAIREISLLKEMNHGNIVRLHDVVHSEKR 466
G+V ++++ TNE +A+KKI ++ +RE+ LL+ + H N++ L D++ +R
Sbjct: 1 GIVCSSINRETNEKVAIKKIHNVFDNRVDALRTLRELKLLRHLRHENVISLKDIMMPVQR 180
Query: 467 IYLVFEYLDLDL 502
YL +L
Sbjct: 181 RSFKDVYLVYEL 216
>gb|BF264315.2|BF264315 HV_CEa0009B14f Hordeum vulgare seedling green leaf EST library
HVcDNA0004 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEa0009B14f, mRNA sequence
Length = 831
Score = 99.6 bits (211), Expect(5) = 3e-040
Identities = 39/69 (56%), Positives = 55/69 (79%)
Frame = +2 / +1
Query: 251 YEKVEKIGEGTYGVVYKALDKATNETIALKKIRLEQEDEGVPSTAIREISLLKEMNHGNI 430
+EK+E+IGEGTYG VY A + TNE +ALKKIR++ E EG P TAIREI +LK+++H N+
Sbjct: 184 FEKLEQIGEGTYGQVYMAKETETNEIVALKKIRMDNEREGFPITAIREIKILKKLHHQNV 363
Query: 431 VRLHDVVHS 457
++L ++V S
Sbjct: 364 IQLKEIVTS 390
Score = 55.1 bits (114), Expect(5) = 3e-040
Identities = 21/37 (56%), Positives = 27/37 (72%)
Frame = +2 / +1
Query: 551 IKSYLYQILRGVAYCHSHRVLHRDLKPQNLLIDRRTN 661
IK Y+ Q+L G+ YCH ++VLHRD+K NLLID N
Sbjct: 532 IKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGN 642
Score = 33.1 bits (66), Expect(5) = 3e-040
Identities = 12/23 (52%), Positives = 17/23 (73%)
Frame = +2 / +1
Query: 722 THEVVTLWYRAPEILLGARQYST 790
T+ V+TLWYR P +LLG + S+
Sbjct: 703 TNRVITLWYRPP*LLLGTQVLSS 771
Score = 26.7 bits (52), Expect(5) = 3e-040
Identities = 10/17 (58%), Positives = 12/17 (70%)
Frame = +2 / +1
Query: 467 IYLVFEYLDLDLKKFMD 517
IY+VFEY+D DL D
Sbjct: 451 IYMVFEYMDHDLTGLAD 501
Score = 24.9 bits (48), Expect(5) = 3e-040
Identities = 10/12 (83%), Positives = 11/12 (91%)
Frame = +2 / +1
Query: 665 LKLADFGLARAF 700
LKLA FGLAR+F
Sbjct: 643 LKLAGFGLARSF 678
>gb|AL504123.1|AL504123 AL504123 Hordeum vulgare Barke roots Hordeum vulgare subsp. vulgare
cDNA clone HW04E10V 5', mRNA sequence
Length = 613
Score = 106 bits (227), Expect(4) = 3e-040
Identities = 39/71 (54%), Positives = 53/71 (74%)
Frame = +2 / +2
Query: 719 FTHEVVTLWYRAPEILLGARQYSTPVDVWSVGCIFAEMVNQKPLFPGDSEIDELFKIFRI 898
+T V T WYRAPE+LL + YS+ VD+W++G I AE+ + +PLFPG SE DE++KI I
Sbjct: 359 YTEYVSTRWYRAPEVLLQSSVYSSAVDMWAMGAIIAELFSHRPLFPGSSEADEIYKICNI 538
Query: 899 LGTPNEQSWPG 931
LGTPN+ +W G
Sbjct: 539 LGTPNQHTWAG 571
Score = 50.6 bits (104), Expect(4) = 3e-040
Identities = 18/45 (40%), Positives = 30/45 (66%)
Frame = +2 / +2
Query: 386 IREISLLKEMNHGNIVRLHDVVHSEKRIYLVFEYLDLDLKKFMDS 520
+RE+ L+ MNH NIV+L +V+ ++ VFEY++ +L + M S
Sbjct: 38 LREVKSLRRMNHPNIVKLKEVIRENDMLFFVFEYMECNLYQLMKS 172
Score = 41.8 bits (85), Expect(4) = 3e-040
Identities = 13/36 (36%), Positives = 25/36 (69%)
Frame = +2 / +2
Query: 545 TLIKSYLYQILRGVAYCHSHRVLHRDLKPQNLLIDR 652
T I+++ +Q+ + +++ H HRDLKP+NLL+ +
Sbjct: 194 TEIRNWCFQVFQALSHMHQRGYFHRDLKPENLLVTK 301
Score = 22.6 bits (43), Expect(4) = 3e-040
Identities = 8/10 (80%), Positives = 10/10 (100%)
Frame = +2 / +2
Query: 665 LKLADFGLAR 694
+K+ADFGLAR
Sbjct: 308 IKVADFGLAR 337
>gb|BU999167.1|BU999167 HI13I04r HI Hordeum vulgare subsp. vulgare cDNA clone HI13I04
5-PRIME, mRNA sequence
Length = 630
Score = 104 bits (222), Expect(4) = 2e-039
Identities = 38/69 (55%), Positives = 52/69 (75%)
Frame = +2 / +3
Query: 719 FTHEVVTLWYRAPEILLGARQYSTPVDVWSVGCIFAEMVNQKPLFPGDSEIDELFKIFRI 898
+T V T WYRAPE+LL + YS+ VD+W++G I AE+ + +PLFPG SE DE++KI I
Sbjct: 366 YTEYVSTRWYRAPEVLLQSSVYSSAVDMWAMGAIIAELFSHRPLFPGSSEADEIYKICNI 545
Query: 899 LGTPNEQSW 925
LGTPN+ +W
Sbjct: 546 LGTPNQHTW 572
Score = 50.6 bits (104), Expect(4) = 2e-039
Identities = 18/45 (40%), Positives = 30/45 (66%)
Frame = +2 / +3
Query: 386 IREISLLKEMNHGNIVRLHDVVHSEKRIYLVFEYLDLDLKKFMDS 520
+RE+ L+ MNH NIV+L +V+ ++ VFEY++ +L + M S
Sbjct: 45 LREVKSLRRMNHPNIVKLKEVIRENDMLFFVFEYMECNLYQLMKS 179
Score = 41.8 bits (85), Expect(4) = 2e-039
Identities = 13/36 (36%), Positives = 25/36 (69%)
Frame = +2 / +3
Query: 545 TLIKSYLYQILRGVAYCHSHRVLHRDLKPQNLLIDR 652
T I+++ +Q+ + +++ H HRDLKP+NLL+ +
Sbjct: 201 TEIRNWCFQVFQALSHMHQRGYFHRDLKPENLLVTK 308
Score = 22.6 bits (43), Expect(4) = 2e-039
Identities = 8/10 (80%), Positives = 10/10 (100%)
Frame = +2 / +3
Query: 665 LKLADFGLAR 694
+K+ADFGLAR
Sbjct: 315 IKVADFGLAR 344
>gb|AV914580.1|AV914580 AV914580 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags7a23 5', mRNA sequence
Length = 593
Score = 103 bits (219), Expect(2) = 2e-039
Identities = 37/57 (64%), Positives = 47/57 (82%)
Frame = +2 / +3
Query: 782 YSTPVDVWSVGCIFAEMVNQKPLFPGDSEIDELFKIFRILGTPNEQSWPGVSCLPDF 952
YSTPVD+WSVGCIFAE++ LFPGDSE+ +L IF++LGTPNE+ WPGV LP++
Sbjct: 18 YSTPVDMWSVGCIFAELITTTALFPGDSEVQQLLHIFQLLGTPNEEVWPGVGKLPNW 188
Score = 80.3 bits (169), Expect(2) = 2e-039
Identities = 27/51 (52%), Positives = 42/51 (82%)
Frame = +2 / +3
Query: 962 FPRWQAQDLATVVPNLDPAGLDLLSKMLRYEPSKRITARQALEHEYFKDLE 1114
+P+W L++V+P+LD G+DLL KML+YEP+KRI+A++A+EH YF D++
Sbjct: 195 YPQWNVSKLSSVIPSLDAVGIDLLEKMLQYEPAKRISAKKAMEHPYFDDVD 347
>gb|BQ464548.1|BQ464548 HF02J12r HF Hordeum vulgare subsp. vulgare cDNA clone HF02J12
5-PRIME, mRNA sequence
Length = 651
Score = 91.8 bits (194), Expect(4) = 7e-039
Identities = 34/67 (50%), Positives = 47/67 (70%)
Frame = +2 / +3
Query: 722 THEVVTLWYRAPEILLGARQYSTPVDVWSVGCIFAEMVNQKPLFPGDSEIDELFKIFRIL 901
T VVT WYRAPE+LL QY+ +DVWSVGCI E++ ++PLFPG I +L I ++
Sbjct: 444 TEYVVTRWYRAPELLLNCSQYTAAIDVWSVGCILGEIITRQPLFPGRDYIQQLKLITELI 623
Query: 902 GTPNEQS 922
G+P++ S
Sbjct: 624 GSPDDSS 644
Score = 52.4 bits (108), Expect(4) = 7e-039
Identities = 19/30 (63%), Positives = 24/30 (80%)
Frame = +2 / +3
Query: 560 YLYQILRGVAYCHSHRVLHRDLKPQNLLID 649
+LYQ+LRG+ Y HS VLHRDLKP NL ++
Sbjct: 288 FLYQLLRGLKYVHSANVLHRDLKPSNLFLN 377
Score = 49.2 bits (101), Expect(4) = 7e-039
Identities = 21/61 (34%), Positives = 35/61 (57%)
Frame = +2 / +3
Query: 284 YGVVYKALDKATNETIALKKIRLEQEDEGVPSTAIREISLLKEMNHGNIVRLHDVVHSEK 463
YG+V A+ T E +A+KKI ++ +REI LL+ M+H NI+ + D++ +
Sbjct: 3 YGIVCAAVSSDTGEEVAIKKIGNAFDNHIDAKRTLREIKLLRHMDHENILAMKDLIRPPR 182
Query: 464 R 466
R
Sbjct: 183 R 185
Score = 24.0 bits (46), Expect(4) = 7e-039
Identities = 9/10 (90%), Positives = 10/10 (100%)
Frame = +2 / +3
Query: 665 LKLADFGLAR 694
LK+ADFGLAR
Sbjct: 390 LKIADFGLAR 419
>gb|BQ464168.1|BQ464168 HF01I15T HF Hordeum vulgare subsp. vulgare cDNA clone HF01I15
5-PRIME, mRNA sequence
Length = 671
Score = 107 bits (229), Expect(3) = 1e-038
Identities = 44/84 (52%), Positives = 57/84 (67%)
Frame = +2 / +3
Query: 665 LKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGARQYSTPVDVWSVGCIFAEMVNQK 844
LK+ DFGLAR + T VVT WYRAPE+LL Y T +DVWSVGCIFAE++ +K
Sbjct: 375 LKICDFGLARTNNTKGQFMTEYVVTRWYRAPELLLCCDNYGTSIDVWSVGCIFAELLGRK 554
Query: 845 PLFPGDSEIDELFKIFRILGTPNE 916
P+FPG +++L I +LGT +E
Sbjct: 555 PIFPGTECLNQLKLIVNVLGTMSE 626
Score = 50.6 bits (104), Expect(3) = 1e-038
Identities = 18/30 (60%), Positives = 25/30 (83%)
Frame = +2 / +3
Query: 560 YLYQILRGVAYCHSHRVLHRDLKPQNLLID 649
+L+Q+LRG+ Y HS +LHRDLKP NLL++
Sbjct: 273 FLFQLLRGLKYLHSAGILHRDLKPGNLLVN 362
Score = 40.9 bits (83), Expect(3) = 1e-038
Identities = 15/50 (30%), Positives = 31/50 (62%)
Frame = +2 / +3
Query: 302 ALDKATNETIALKKIRLEQEDEGVPSTAIREISLLKEMNHGNIVRLHDVV 451
++++ TNE +A+KKI ++ +RE+ LL+ + H N++ L D++
Sbjct: 6 SINQETNEKVAIKKINNVFDNRVDALRTLRELKLLRHLRHENVIALKDIM 155
>gb|CA032344.1|CA032344 HX12L20r HX Hordeum vulgare subsp. vulgare cDNA clone HX12L20
5-PRIME, mRNA sequence
Length = 484
Score = 91.8 bits (194), Expect(3) = 5e-038
Identities = 36/57 (63%), Positives = 48/57 (84%)
Frame = +2 / +3
Query: 239 AMEQYEKVEKIGEGTYGVVYKALDKATNETIALKKIRLEQEDEGVPSTAIREISLLK 409
+M++YEK+EK+GEGTYG VYKA AT + +ALKK RLE ++EG+P TA+REISLL+
Sbjct: 30 SMDKYEKLEKVGEGTYGKVYKARVAATGQLVALKKTRLEMDEEGIPPTALREISLLR 200
Score = 68.9 bits (144), Expect(3) = 5e-038
Identities = 24/35 (68%), Positives = 31/35 (88%)
Frame = +2 / +3
Query: 548 LIKSYLYQILRGVAYCHSHRVLHRDLKPQNLLIDR 652
++KS+LYQ+ +G A+CH H VLHRDLKPQNLLID+
Sbjct: 369 VVKSFLYQLCKGTAHCHGHGVLHRDLKPQNLLIDK 473
Score = 36.3 bits (73), Expect(3) = 5e-038
Identities = 13/17 (76%), Positives = 16/17 (94%)
Frame = +2 / +3
Query: 467 IYLVFEYLDLDLKKFMD 517
+YLVFE+LD DLKKF+D
Sbjct: 276 LYLVFEFLDTDLKKFVD 326
>gb|BJ463667.1|BJ463667 BJ463667 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags32p22 5', mRNA sequence
Length = 617
Score = 101 bits (216), Expect(2) = 2e-037
Identities = 36/57 (63%), Positives = 47/57 (82%)
Frame = +2 / +2
Query: 782 YSTPVDVWSVGCIFAEMVNQKPLFPGDSEIDELFKIFRILGTPNEQSWPGVSCLPDF 952
YST VD+WS+GCIFAEMV ++ LFPGDSE+ +L IFR++GTP E+ WPGV+ L D+
Sbjct: 32 YSTGVDIWSIGCIFAEMVRKQALFPGDSELQQLLHIFRLMGTPTEEDWPGVTALRDW 202
Score = 75.3 bits (158), Expect(2) = 2e-037
Identities = 28/54 (51%), Positives = 40/54 (74%)
Frame = +2 / +2
Query: 962 FPRWQAQDLATVVPNLDPAGLDLLSKMLRYEPSKRITARQALEHEYFKDLEVVQ 1123
FP+W+AQ + VP L+ G+DLLSKML+++P+ RI+A+ ALEH YF L+ Q
Sbjct: 209 FPQWKAQRMTRAVPTLETEGIDLLSKMLQFDPANRISAKAALEHPYFNSLDKSQ 370
>gb|AL504341.1|AL504341 AL504341 Hordeum vulgare Barke roots Hordeum vulgare subsp. vulgare
cDNA clone HW04P17V 5', mRNA sequence
Length = 700
Score = 91.8 bits (194), Expect(4) = 2e-037
Identities = 33/65 (50%), Positives = 45/65 (69%)
Frame = +2 / +1
Query: 722 THEVVTLWYRAPEILLGARQYSTPVDVWSVGCIFAEMVNQKPLFPGDSEIDELFKIFRIL 901
T VVT WYRAPE+LL + YS +DVWSVGCIF E++N+ P FPG + ++ I ++
Sbjct: 451 TEYVVTRWYRAPELLLNSTDYSAAIDVWSVGCIFMELINRAPXFPGRDHMHQMRLITEVI 630
Query: 902 GTPNE 916
GTP +
Sbjct: 631 GTPTD 645
Score = 53.3 bits (110), Expect(4) = 2e-037
Identities = 19/30 (63%), Positives = 25/30 (83%)
Frame = +2 / +1
Query: 560 YLYQILRGVAYCHSHRVLHRDLKPQNLLID 649
+LYQ+LRG+ Y HS V+HRDLKP NLL++
Sbjct: 295 FLYQLLRGLKYIHSANVIHRDLKPSNLLLN 384
Score = 45.1 bits (92), Expect(4) = 2e-037
Identities = 21/55 (38%), Positives = 31/55 (56%)
Frame = +2 / +1
Query: 287 GVVYKALDKATNETIALKKIRLEQEDEGVPSTAIREISLLKEMNHGNIVRLHDVV 451
G+V ++ T E A+KKI ++ +REI LLK ++H NIV L DV+
Sbjct: 13 GIVCSVMNFETREMXAIKKIANAFDNNMDAKRTLREIKLLKHLDHENIVGLRDVI 177
Score = 22.1 bits (42), Expect(4) = 2e-037
Identities = 8/10 (80%), Positives = 9/10 (90%)
Frame = +2 / +1
Query: 665 LKLADFGLAR 694
LK+ DFGLAR
Sbjct: 397 LKICDFGLAR 426
>gb|BE214980.2|BE214980 HV_CEb0005G20f Hordeum vulgare seedling green leaf EST library
HVcDNA0005 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEb0005G20f, mRNA sequence
Length = 678
Score = 106 bits (227), Expect(4) = 6e-037
Identities = 39/71 (54%), Positives = 53/71 (74%)
Frame = +2 / +1
Query: 719 FTHEVVTLWYRAPEILLGARQYSTPVDVWSVGCIFAEMVNQKPLFPGDSEIDELFKIFRI 898
+T V T WYRAPE+LL + YS+ VD+W++G I AE+ + +PLFPG SE DE++KI I
Sbjct: 184 YTEYVSTRWYRAPEVLLQSSVYSSAVDMWAMGAIIAELFSHRPLFPGSSEADEIYKICNI 363
Query: 899 LGTPNEQSWPG 931
LGTPN+ +W G
Sbjct: 364 LGTPNQHTWAG 396
Score = 41.8 bits (85), Expect(4) = 6e-037
Identities = 13/36 (36%), Positives = 25/36 (69%)
Frame = +2 / +1
Query: 545 TLIKSYLYQILRGVAYCHSHRVLHRDLKPQNLLIDR 652
T I+++ +Q+ + +++ H HRDLKP+NLL+ +
Sbjct: 19 TEIRNWCFQVFQALSHMHQRGYFHRDLKPENLLVTK 126
Score = 39.6 bits (80), Expect(4) = 6e-037
Identities = 16/48 (33%), Positives = 30/48 (62%)
Frame = +2 / +1
Query: 962 FPRWQAQDLATVVPNLDPAGLDLLSKMLRYEPSKRITARQALEHEYFK 1105
FP+ + +L+ VVP L+L+S + ++P K+ TA + L+H +F+
Sbjct: 430 FPQSGSINLSEVVPTASEDALNLISWLCSWDPRKKPTAVEVLQHPFFQ 573
Score = 22.6 bits (43), Expect(4) = 6e-037
Identities = 8/10 (80%), Positives = 10/10 (100%)
Frame = +2 / +1
Query: 665 LKLADFGLAR 694
+K+ADFGLAR
Sbjct: 133 IKVADFGLAR 162
>gb|BJ464400.1|BJ464400 BJ464400 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags34c14 5', mRNA sequence
Length = 644
Score = 98.7 bits (209), Expect(4) = 1e-036
Identities = 35/65 (53%), Positives = 49/65 (75%)
Frame = +2 / +3
Query: 722 THEVVTLWYRAPEILLGARQYSTPVDVWSVGCIFAEMVNQKPLFPGDSEIDELFKIFRIL 901
T VVT WYRAPE+LL + +Y+ +DVWSVGCIF E++++KPLFPG + +L + ++
Sbjct: 417 TEYVVTRWYRAPELLLNSSEYTAAIDVWSVGCIFMELMDRKPLFPGRDHVHQLRLLMELI 596
Query: 902 GTPNE 916
GTPNE
Sbjct: 597 GTPNE 611
Score = 55.1 bits (114), Expect(4) = 1e-036
Identities = 21/30 (70%), Positives = 25/30 (83%)
Frame = +2 / +3
Query: 560 YLYQILRGVAYCHSHRVLHRDLKPQNLLID 649
+LYQILRG+ Y HS VLHRDLKP NLL++
Sbjct: 261 FLYQILRGLKYIHSANVLHRDLKPSNLLLN 350
Score = 34.1 bits (68), Expect(4) = 1e-036
Identities = 14/39 (35%), Positives = 23/39 (58%)
Frame = +2 / +3
Query: 386 IREISLLKEMNHGNIVRLHDVVHSEKRIYLVFEYLDLDL 502
+REI LL+ M+H NIV + D++ +R Y+ +L
Sbjct: 78 LREIKLLRHMDHENIVAIRDIIPPAQRTAFNDVYIAYEL 194
Score = 22.1 bits (42), Expect(4) = 1e-036
Identities = 8/10 (80%), Positives = 9/10 (90%)
Frame = +2 / +3
Query: 665 LKLADFGLAR 694
LK+ DFGLAR
Sbjct: 363 LKICDFGLAR 392
>gb|BQ458970.1|BQ458970 HA02L10r HA Hordeum vulgare subsp. vulgare cDNA clone HA02L10
5-PRIME, mRNA sequence
Length = 621
Score = 98.7 bits (209), Expect(4) = 1e-036
Identities = 35/65 (53%), Positives = 49/65 (75%)
Frame = +2 / +2
Query: 722 THEVVTLWYRAPEILLGARQYSTPVDVWSVGCIFAEMVNQKPLFPGDSEIDELFKIFRIL 901
T VVT WYRAPE+LL + +Y+ +DVWSVGCIF E++++KPLFPG + +L + ++
Sbjct: 395 TEYVVTRWYRAPELLLNSSEYTAAIDVWSVGCIFMELMDRKPLFPGRDHVHQLRLLMELI 574
Query: 902 GTPNE 916
GTPNE
Sbjct: 575 GTPNE 589
Score = 55.1 bits (114), Expect(4) = 1e-036
Identities = 21/30 (70%), Positives = 25/30 (83%)
Frame = +2 / +2
Query: 560 YLYQILRGVAYCHSHRVLHRDLKPQNLLID 649
+LYQILRG+ Y HS VLHRDLKP NLL++
Sbjct: 239 FLYQILRGLKYIHSANVLHRDLKPSNLLLN 328
Score = 34.1 bits (68), Expect(4) = 1e-036
Identities = 14/39 (35%), Positives = 23/39 (58%)
Frame = +2 / +2
Query: 386 IREISLLKEMNHGNIVRLHDVVHSEKRIYLVFEYLDLDL 502
+REI LL+ M+H NIV + D++ +R Y+ +L
Sbjct: 56 LREIKLLRHMDHENIVAIRDIIPPAQRTAFNDVYIAYEL 172
Score = 22.1 bits (42), Expect(4) = 1e-036
Identities = 8/10 (80%), Positives = 9/10 (90%)
Frame = +2 / +2
Query: 665 LKLADFGLAR 694
LK+ DFGLAR
Sbjct: 341 LKICDFGLAR 370
>gb|CA023998.1|CA023998 HZ48B07r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ48B07
5-PRIME, mRNA sequence
Length = 588
Score = 154 bits (330), Expect = 1e-036
Identities = 62/125 (49%), Positives = 86/125 (68%)
Frame = +2 / +1
Query: 665 LKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGARQYSTPVDVWSVGCIFAEMVNQK 844
LK+ DFGL+R +G P++ +T VVTLWYR+PE+LLG ++YST +D+WSVGCI AE++ ++
Sbjct: 55 LKICDFGLSRQYGSPLKPYTQLVVTLWYRSPELLLGTKEYSTAIDMWSVGCIMAELLAKE 234
Query: 845 PLFPGDSEIDELFKIFRILGTPNEQSWPGVSCLPDFKTAFPRWQAQDLATVVPNLDPAGL 1024
PLF G +E ++L KIFR LGTPNE+ WPG + LP K F + L P +G
Sbjct: 235 PLFNGKTEFEQLDKIFRTLGTPNEKIWPGYAKLPGVKVNFVKQPYNRLRDKFPAASFSGR 414
Query: 1025 DLLSK 1039
LS+
Sbjct: 415 PNLSE 429
>gb|BF265526.2|BF265526 HV_CEa0012J07f Hordeum vulgare seedling green leaf EST library
HVcDNA0004 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEa0012J07f, mRNA sequence
Length = 837
Score = 80.3 bits (169), Expect(3) = 3e-036
Identities = 33/63 (52%), Positives = 41/63 (65%)
Frame = +2 / +2
Query: 665 LKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGARQYSTPVDVWSVGCIFAEMVNQK 844
LK+ DFGLAR + T VVT WYRAPE+LL Y T +DVW+VGCIFAE++ +
Sbjct: 602 LKICDFGLARTNNTKGQFMTEYVVTRWYRAPELLLCCDNYGTYIDVWAVGCIFAELLGRS 781
Query: 845 PLF 853
F
Sbjct: 782 RSF 790
Score = 60.2 bits (125), Expect(3) = 3e-036
Identities = 22/68 (32%), Positives = 42/68 (61%)
Frame = +2 / +2
Query: 248 QYEKVEKIGEGTYGVVYKALDKATNETIALKKIRLEQEDEGVPSTAIREISLLKEMNHGN 427
+Y ++ IG G YG+V ++++ TNE +A+KKI ++ +RE+ LL+ + H N
Sbjct: 179 KYVPIKPIGRGAYGIVCSSINQETNEKVAIKKINNVFDNRVDALRTLRELKLLRHLRHEN 358
Query: 428 IVRLHDVV 451
++ L D++
Sbjct: 359 VIALKDIM 382
Score = 50.6 bits (104), Expect(3) = 3e-036
Identities = 18/30 (60%), Positives = 25/30 (83%)
Frame = +2 / +2
Query: 560 YLYQILRGVAYCHSHRVLHRDLKPQNLLID 649
+L+Q+LRG+ Y HS +LHRDLKP NLL++
Sbjct: 500 FLFQLLRGLKYLHSAGILHRDLKPGNLLVN 589
>gb|AL503490.1|AL503490 AL503490 Hordeum vulgare Barke roots Hordeum vulgare subsp. vulgare
cDNA clone HW02F05T 5', mRNA sequence
Length = 700
Score = 84.0 bits (177), Expect(4) = 1e-035
Identities = 30/53 (56%), Positives = 39/53 (73%)
Frame = +2 / +3
Query: 722 THEVVTLWYRAPEILLGARQYSTPVDVWSVGCIFAEMVNQKPLFPGDSEIDEL 880
T VVT WYRAPE+LL + YS +DVWSVGCIF E++N+ PLFPG + ++
Sbjct: 453 TEYVVTRWYRAPELLLNSTDYSAAIDVWSVGCIFMELINRAPLFPGRDHMHQM 611
Score = 53.3 bits (110), Expect(4) = 1e-035
Identities = 19/30 (63%), Positives = 25/30 (83%)
Frame = +2 / +3
Query: 560 YLYQILRGVAYCHSHRVLHRDLKPQNLLID 649
+LYQ+LRG+ Y HS V+HRDLKP NLL++
Sbjct: 297 FLYQLLRGLKYIHSANVIHRDLKPSNLLLN 386
Score = 46.9 bits (96), Expect(4) = 1e-035
Identities = 21/55 (38%), Positives = 32/55 (58%)
Frame = +2 / +3
Query: 287 GVVYKALDKATNETIALKKIRLEQEDEGVPSTAIREISLLKEMNHGNIVRLHDVV 451
G+V ++ T E +A+KKI ++ +REI LLK ++H NIV L DV+
Sbjct: 15 GIVCSVMNFETREMVAIKKIANAFDNNMDAKRTLREIKLLKHLDHENIVGLRDVI 179
Score = 22.1 bits (42), Expect(4) = 1e-035
Identities = 8/10 (80%), Positives = 9/10 (90%)
Frame = +2 / +3
Query: 665 LKLADFGLAR 694
LK+ DFGLAR
Sbjct: 399 LKICDFGLAR 428
>gb|CB882697.1|CB882697 HL02J13w HL Hordeum vulgare subsp. vulgare cDNA clone HL02J13
3-PRIME, mRNA sequence
Length = 648
Score = 99.6 bits (211), Expect(4) = 1e-035
Identities = 39/69 (56%), Positives = 55/69 (79%)
Frame = +2 / +2
Query: 251 YEKVEKIGEGTYGVVYKALDKATNETIALKKIRLEQEDEGVPSTAIREISLLKEMNHGNI 430
+EK+E+IGEGTYG VY A + TNE +ALKKIR++ E EG P TAIREI +LK+++H N+
Sbjct: 158 FEKLEQIGEGTYGQVYMAKETETNEIVALKKIRMDNEREGFPITAIREIKILKKLHHQNV 337
Query: 431 VRLHDVVHS 457
++L ++V S
Sbjct: 338 IQLKEIVTS 364
Score = 55.1 bits (114), Expect(4) = 1e-035
Identities = 21/37 (56%), Positives = 27/37 (72%)
Frame = +2 / +2
Query: 551 IKSYLYQILRGVAYCHSHRVLHRDLKPQNLLIDRRTN 661
IK Y+ Q+L G+ YCH ++VLHRD+K NLLID N
Sbjct: 506 IKCYMKQLLTGLHYCHVNQVLHRDIKGSNLLIDNEGN 616
Score = 26.7 bits (52), Expect(4) = 1e-035
Identities = 10/17 (58%), Positives = 12/17 (70%)
Frame = +2 / +2
Query: 467 IYLVFEYLDLDLKKFMD 517
IY+VFEY+D DL D
Sbjct: 425 IYMVFEYMDHDLTGLAD 475
Score = 24.9 bits (48), Expect(4) = 1e-035
Identities = 10/10 (100%), Positives = 10/10 (100%)
Frame = +2 / +2
Query: 665 LKLADFGLAR 694
LKLADFGLAR
Sbjct: 617 LKLADFGLAR 646
>gb|BG417558.1|BG417558 HVSMEk0018C06f Hordeum vulgare testa/pericarp EST library
HVcDNA0013 (normal) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEk0018C06f, mRNA sequence
Length = 705
Score = 93.6 bits (198), Expect(3) = 1e-033
Identities = 38/72 (52%), Positives = 48/72 (66%)
Frame = +2 / +1
Query: 665 LKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGARQYSTPVDVWSVGCIFAEMVNQK 844
LK+ D GLAR + T VVT WYRAPE+LL Y T +DVWSVGCIFAE++ +K
Sbjct: 466 LKICDXGLARTNSSKGQVMTEYVVTRWYRAPELLLCCDNYGTSIDVWSVGCIFAELLGRK 645
Query: 845 PLFPGDSEIDEL 880
P+F G S + +L
Sbjct: 646 PIFQGPSALIQL 681
Score = 51.5 bits (106), Expect(3) = 1e-033
Identities = 18/30 (60%), Positives = 25/30 (83%)
Frame = +2 / +1
Query: 560 YLYQILRGVAYCHSHRVLHRDLKPQNLLID 649
+L+Q+LRG+ Y HS +LHRDLKP NLL++
Sbjct: 364 FLFQLLRGLKYLHSAEILHRDLKPGNLLVN 453
Score = 41.8 bits (85), Expect(3) = 1e-033
Identities = 14/33 (42%), Positives = 24/33 (72%)
Frame = +2 / +1
Query: 248 QYEKVEKIGEGTYGVVYKALDKATNETIALKKI 346
+Y ++ IG G YG+V ++++ TNE +A+KKI
Sbjct: 49 KYVPIKPIGRGAYGIVCSSINRETNEKVAIKKI 147
>gb|BM817317.1|BM817317 HC108A05_SK.ab1 HC Hordeum vulgare subsp. vulgare cDNA clone
HC108A05_SK.ab1 similar to Methylumbelliferyl-acetate
deacetylase,Thymidylate kinase,Polynucleotide
adenylyltransferase, mRNA sequence
Length = 916
Score = 57.4 bits (119), Expect(5) = 3e-033
Identities = 19/36 (52%), Positives = 26/36 (72%)
Frame = +2 / +3
Query: 755 PEILLGARQYSTPVDVWSVGCIFAEMVNQKPLFPGD 862
PE+LL + YS +DVWSVGCI E++N+ P PG+
Sbjct: 669 PELLLNSTDYSAAIDVWSVGCILMELINRAPALPGE 776
Score = 57.4 bits (119), Expect(5) = 3e-033
Identities = 25/61 (40%), Positives = 36/61 (59%)
Frame = +2 / +2
Query: 269 IGEGTYGVVYKALDKATNETIALKKIRLEQEDEGVPSTAIREISLLKEMNHGNIVRLHDV 448
IG G YG+V ++ T E +A+KKI ++ +REI LLK ++H NIV L DV
Sbjct: 179 IGRGAYGIVCSVMNFETREMVAIKKIANAFDNNMDAKRTLREIKLLKHLDHENIVGLRDV 358
Query: 449 V 451
+
Sbjct: 359 I 361
Score = 53.3 bits (110), Expect(5) = 3e-033
Identities = 19/30 (63%), Positives = 25/30 (83%)
Frame = +2 / +2
Query: 560 YLYQILRGVAYCHSHRVLHRDLKPQNLLID 649
+LYQ+LRG+ Y HS V+HRDLKP NLL++
Sbjct: 479 FLYQLLRGLKYIHSANVIHRDLKPSNLLLN 568
Score = 24.9 bits (48), Expect(5) = 3e-033
Identities = 9/12 (75%), Positives = 9/12 (75%)
Frame = +2 / +2
Query: 722 THEVVTLWYRAP 757
T VVT WYRAP
Sbjct: 635 TEYVVTRWYRAP 670
Score = 22.1 bits (42), Expect(5) = 3e-033
Identities = 8/10 (80%), Positives = 9/10 (90%)
Frame = +2 / +2
Query: 665 LKLADFGLAR 694
LK+ DFGLAR
Sbjct: 581 LKICDFGLAR 610
>gb|BU975065.1|BU975065 HB29P18r BC Hordeum vulgare subsp. vulgare cDNA clone HB29P18
5-PRIME, mRNA sequence
Length = 663
Score = 64.3 bits (134), Expect(4) = 3e-033
Identities = 23/38 (60%), Positives = 28/38 (73%)
Frame = +2 / +2
Query: 722 THEVVTLWYRAPEILLGARQYSTPVDVWSVGCIFAEMV 835
T VVT WYRAPE+LL QY+ +DVWSVGCI E++
Sbjct: 545 TEYVVTRWYRAPELLLNCSQYTAAIDVWSVGCILGEII 658
Score = 57.4 bits (119), Expect(4) = 3e-033
Identities = 24/69 (34%), Positives = 39/69 (56%)
Frame = +2 / +2
Query: 260 VEKIGEGTYGVVYKALDKATNETIALKKIRLEQEDEGVPSTAIREISLLKEMNHGNIVRL 439
+ IG G YG+V A+ T E +A+KKI ++ +REI LL+ M+H NI+ +
Sbjct: 80 IRPIGRGAYGIVCAAVSSDTGEEVAIKKIGNAFDNHIDAKRTLREIKLLRHMDHENILAM 259
Query: 440 HDVVHSEKR 466
D++ +R
Sbjct: 260 KDLIRPPRR 286
Score = 52.4 bits (108), Expect(4) = 3e-033
Identities = 19/30 (63%), Positives = 24/30 (80%)
Frame = +2 / +2
Query: 560 YLYQILRGVAYCHSHRVLHRDLKPQNLLID 649
+LYQ+LRG+ Y HS VLHRDLKP NL ++
Sbjct: 389 FLYQLLRGLKYVHSANVLHRDLKPSNLFLN 478
Score = 24.0 bits (46), Expect(4) = 3e-033
Identities = 9/10 (90%), Positives = 10/10 (100%)
Frame = +2 / +2
Query: 665 LKLADFGLAR 694
LK+ADFGLAR
Sbjct: 491 LKIADFGLAR 520
>gb|BI956073.1|BI956073 HVSMEm0025J05f Hordeum vulgare green seedling EST library
HVcDNA0014 (Blumeria infected) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEm0025J05f, mRNA sequence
Length = 680
Score = 99.6 bits (211), Expect(4) = 6e-033
Identities = 37/68 (54%), Positives = 51/68 (75%)
Frame = +2 / +1
Query: 719 FTHEVVTLWYRAPEILLGARQYSTPVDVWSVGCIFAEMVNQKPLFPGDSEIDELFKIFRI 898
+T V T WYRAPE+LL + YS+ VD+W++G I AE+ + +PLFPG SE DE++KI I
Sbjct: 292 YTEYVSTRWYRAPEVLLQSSVYSSTVDMWAMGAIIAELFSHRPLFPGSSEADEIYKICNI 471
Query: 899 LGTPNEQS 922
LGTPN+ +
Sbjct: 472 LGTPNQHT 495
Score = 39.6 bits (80), Expect(4) = 6e-033
Identities = 13/36 (36%), Positives = 23/36 (63%)
Frame = +2 / +1
Query: 545 TLIKSYLYQILRGVAYCHSHRVLHRDLKPQNLLIDR 652
T I+++ +Q+ + + H HRDLKP+NLL+ +
Sbjct: 127 TEIRNWCFQVFQALGEMHQRGYFHRDLKPENLLVTK 234
Score = 35.4 bits (71), Expect(4) = 6e-033
Identities = 12/35 (34%), Positives = 21/35 (60%)
Frame = +2 / +1
Query: 416 NHGNIVRLHDVVHSEKRIYLVFEYLDLDLKKFMDS 520
NHG +L +V+ ++ VFEY++ +L + M S
Sbjct: 1 NHGGCXKLKEVIKENDMLFFVFEYMECNLYQLMKS 105
Score = 22.6 bits (43), Expect(4) = 6e-033
Identities = 8/10 (80%), Positives = 10/10 (100%)
Frame = +2 / +1
Query: 665 LKLADFGLAR 694
+K+ADFGLAR
Sbjct: 241 IKVADFGLAR 270
>gb|AJ427601.1|AJ427601 AJ427601 Hordeum vulgare subsp. vulgare primary leaf 7-day old
seedling Hordeum vulgare subsp. vulgare cDNA clone
CE13a-3, mRNA sequence
Length = 2276
Score = 61.6 bits (128), Expect(5) = 9e-033
Identities = 20/48 (41%), Positives = 36/48 (75%)
Frame = +2 / +2
Query: 779 QYSTPVDVWSVGCIFAEMVNQKPLFPGDSEIDELFKIFRILGTPNEQS 922
+Y+ +++WS+GCIFAE++ +PLFPG + + +L I +LGTP+ ++
Sbjct: 959 KYTPAIEIWSIGCIFAELLTGRPLFPGKNVVHQLDIITDLLGTPSSET 1102
Score = 57.4 bits (119), Expect(5) = 9e-033
Identities = 24/68 (35%), Positives = 41/68 (60%)
Frame = +2 / +2
Query: 248 QYEKVEKIGEGTYGVVYKALDKATNETIALKKIRLEQEDEGVPSTAIREISLLKEMNHGN 427
QY+ E +G+G+YGVV A+D T E +A+KKI E + +RE+ LL+ + H +
Sbjct: 410 QYQIQEVVGKGSYGVVAAAIDTRTGERVAIKKINDVFEHVSDATRILREVKLLRLLRHPD 589
Query: 428 IVRLHDVV 451
+V + ++
Sbjct: 590 VVEIKHIM 613
Score = 46.0 bits (94), Expect(5) = 9e-033
Identities = 16/28 (57%), Positives = 21/28 (75%)
Frame = +2 / +2
Query: 560 YLYQILRGVAYCHSHRVLHRDLKPQNLL 643
+LYQ+LR + Y H V HRDLKP+N+L
Sbjct: 731 FLYQLLRALKYIHGANVFHRDLKPKNIL 814
Score = 26.3 bits (51), Expect(5) = 9e-033
Identities = 9/15 (60%), Positives = 11/15 (73%)
Frame = +2 / +2
Query: 719 FTHEVVTLWYRAPEI 763
+T V T WYRAPE+
Sbjct: 896 WTDYVATRWYRAPEL 940
Score = 22.1 bits (42), Expect(5) = 9e-033
Identities = 8/10 (80%), Positives = 9/10 (90%)
Frame = +2 / +2
Query: 665 LKLADFGLAR 694
LK+ DFGLAR
Sbjct: 833 LKICDFGLAR 862
>emb|AJ495775.1|HVU495775 Hordeum vulgare mRNA for putative MAP kinase
Length = 2276
Score = 61.6 bits (128), Expect(5) = 9e-033
Identities = 20/48 (41%), Positives = 36/48 (75%)
Frame = +2 / +2
Query: 779 QYSTPVDVWSVGCIFAEMVNQKPLFPGDSEIDELFKIFRILGTPNEQS 922
+Y+ +++WS+GCIFAE++ +PLFPG + + +L I +LGTP+ ++
Sbjct: 959 KYTPAIEIWSIGCIFAELLTGRPLFPGKNVVHQLDIITDLLGTPSSET 1102
Score = 57.4 bits (119), Expect(5) = 9e-033
Identities = 24/68 (35%), Positives = 41/68 (60%)
Frame = +2 / +2
Query: 248 QYEKVEKIGEGTYGVVYKALDKATNETIALKKIRLEQEDEGVPSTAIREISLLKEMNHGN 427
QY+ E +G+G+YGVV A+D T E +A+KKI E + +RE+ LL+ + H +
Sbjct: 410 QYQIQEVVGKGSYGVVAAAIDTRTGERVAIKKINDVFEHVSDATRILREVKLLRLLRHPD 589
Query: 428 IVRLHDVV 451
+V + ++
Sbjct: 590 VVEIKHIM 613
Score = 46.0 bits (94), Expect(5) = 9e-033
Identities = 16/28 (57%), Positives = 21/28 (75%)
Frame = +2 / +2
Query: 560 YLYQILRGVAYCHSHRVLHRDLKPQNLL 643
+LYQ+LR + Y H V HRDLKP+N+L
Sbjct: 731 FLYQLLRALKYIHGANVFHRDLKPKNIL 814
Score = 26.3 bits (51), Expect(5) = 9e-033
Identities = 9/15 (60%), Positives = 11/15 (73%)
Frame = +2 / +2
Query: 719 FTHEVVTLWYRAPEI 763
+T V T WYRAPE+
Sbjct: 896 WTDYVATRWYRAPEL 940
Score = 22.1 bits (42), Expect(5) = 9e-033
Identities = 8/10 (80%), Positives = 9/10 (90%)
Frame = +2 / +2
Query: 665 LKLADFGLAR 694
LK+ DFGLAR
Sbjct: 833 LKICDFGLAR 862
>gb|BU999245.1|BU999245 HI13O09r HI Hordeum vulgare subsp. vulgare cDNA clone HI13O09
5-PRIME, mRNA sequence
Length = 662
Score = 54.7 bits (113), Expect(5) = 5e-032
Identities = 20/38 (52%), Positives = 28/38 (73%)
Frame = +2 / +1
Query: 719 FTHEVVTLWYRAPEILLGARQYSTPVDVWSVGCIFAEM 832
+T V T WYRAPE+LL + YS+ VD+W++G I AE+
Sbjct: 547 YTEYVSTRWYRAPEVLLQSSVYSSAVDMWAMGAIIAEL 660
Score = 50.6 bits (104), Expect(5) = 5e-032
Identities = 18/45 (40%), Positives = 30/45 (66%)
Frame = +2 / +1
Query: 386 IREISLLKEMNHGNIVRLHDVVHSEKRIYLVFEYLDLDLKKFMDS 520
+RE+ L+ MNH NIV+L +V+ ++ VFEY++ +L + M S
Sbjct: 226 LREVKSLRRMNHPNIVKLKEVIRENDMLFFVFEYMECNLYQLMKS 360
Score = 41.8 bits (85), Expect(5) = 5e-032
Identities = 13/36 (36%), Positives = 25/36 (69%)
Frame = +2 / +1
Query: 545 TLIKSYLYQILRGVAYCHSHRVLHRDLKPQNLLIDR 652
T I+++ +Q+ + +++ H HRDLKP+NLL+ +
Sbjct: 382 TEIRNWCFQVFQALSHMHQRGYFHRDLKPENLLVTK 489
Score = 41.4 bits (84), Expect(5) = 5e-032
Identities = 12/34 (35%), Positives = 27/34 (79%)
Frame = +2 / +1
Query: 248 QYEKVEKIGEGTYGVVYKALDKATNETIALKKIR 349
+Y + ++G+GT+G V++A++K + E +A+KK++
Sbjct: 91 RYNIITEVGDGTFGSVWRAINKESGEVVAIKKMK 192
Score = 22.6 bits (43), Expect(5) = 5e-032
Identities = 8/10 (80%), Positives = 10/10 (100%)
Frame = +2 / +1
Query: 665 LKLADFGLAR 694
+K+ADFGLAR
Sbjct: 496 IKVADFGLAR 525
>gb|BQ464553.1|BQ464553 HF02J18r HF Hordeum vulgare subsp. vulgare cDNA clone HF02J18
5-PRIME, mRNA sequence
Length = 500
Score = 107 bits (229), Expect(2) = 6e-032
Identities = 44/84 (52%), Positives = 57/84 (67%)
Frame = +2 / +2
Query: 665 LKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGARQYSTPVDVWSVGCIFAEMVNQK 844
LK+ DFGLAR + T VVT WYRAPE+LL Y T +DVWSVGCIFAE++ +K
Sbjct: 149 LKICDFGLARTNNTKGQFMTEYVVTRWYRAPELLLCCDNYGTSIDVWSVGCIFAELLGRK 328
Query: 845 PLFPGDSEIDELFKIFRILGTPNE 916
P+FPG +++L I +LGT +E
Sbjct: 329 PIFPGTECLNQLKLIVNVLGTMSE 400
Score = 50.6 bits (104), Expect(2) = 6e-032
Identities = 18/30 (60%), Positives = 25/30 (83%)
Frame = +2 / +2
Query: 560 YLYQILRGVAYCHSHRVLHRDLKPQNLLID 649
+L+Q+LRG+ Y HS +LHRDLKP NLL++
Sbjct: 47 FLFQLLRGLKYLHSAGILHRDLKPGNLLVN 136
Database: Hordeum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:16 PM
Number of letters in database: 175,134,539
Number of sequences in database: 312,970
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 516,054,230
Number of Sequences: 312970
Number of extensions: 7934210
Number of successful extensions: 58702
Number of sequences better than 1.0e-020: 151
length of database: 58,378,179
effective HSP length: 53
effective length of database: 41,790,769
effective search space used: 16590935293
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)