TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2405341.2.2
(1164 letters)
Database: Hordeum_nucl_with_EST.fasta
312,970 sequences; 175,134,539 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|AV913572.1|AV913572 AV913572 K. Sato unpublished cDNA li... 419 e-125
gb|BU980696.1|BU980696 HA21G18r HA Hordeum vulgare subsp. v... 362 2e-099
gb|BU980799.1|BU980799 HA21L17r HA Hordeum vulgare subsp. v... 362 2e-099
gb|CA001134.1|CA001134 HS05H22u HS Hordeum vulgare subsp. v... 307 2e-083
gb|CD663742.1|CD663742 UCRHV18_06ca04_b1 Drought-stressed D... 283 5e-080
gb|AV918875.1|AV918875 AV918875 K. Sato unpublished cDNA li... 232 8e-076
dbj|AB109213.1| Hordeum vulgare BRI1 gene for putative bras... 100 6e-061
dbj|AB109215.1| Hordeum vulgare BRI1 gene for putative bras... 100 8e-060
gb|BF260965.2|BF260965 HVSMEf0023G13f Hordeum vulgare seedl... 107 2e-058
gb|BF260967.2|BF260967 HVSMEf0023G15f Hordeum vulgare seedl... 105 2e-056
gb|BG414636.2|BG414636 HVSMEk0003C21f Hordeum vulgare testa... 180 2e-055
gb|BF258307.2|BF258307 HVSMEf0015G02f Hordeum vulgare seedl... 127 2e-053
gb|BE196273.3|BE196273 HVSMEh0091N12f Hordeum vulgare 5-45 ... 154 6e-052
gb|AW982539.2|AW982539 HVSMEg0003I16f Hordeum vulgare pre-a... 174 6e-052
gb|CA029588.1|CA029588 HZ65K08r HZ Hordeum vulgare subsp. v... 160 8e-052
gb|BE060160.1|BE060160 HVSMEg0011B12f Hordeum vulgare pre-a... 168 2e-051
gb|BI960328.1|BI960328 HVSMEn0024D23f Hordeum vulgare rachi... 127 9e-050
gb|BG366077.2|BG366077 HVSMEi0005C13f Hordeum vulgare 20 DA... 138 1e-048
gb|BU985927.1|BU985927 HF09B02r HF Hordeum vulgare subsp. v... 166 5e-048
gb|BG414953.2|BG414953 HVSMEk0004G13f Hordeum vulgare testa... 143 7e-048
gb|BQ763863.1|BQ763863 EBro03_SQ005_I18_R root, 3 week, wat... 96 9e-048
gb|BE060551.2|BE060551 HVSMEg0012J19f Hordeum vulgare pre-a... 109 3e-047
gb|BJ462905.1|BJ462905 BJ462905 K. Sato unpublished cDNA li... 123 7e-047
gb|BU972150.1|BU972150 HB20M05r BC Hordeum vulgare subsp. v... 173 1e-046
gb|BQ760957.1|BQ760957 EBro03_SQ003_P10_R root, 3 week, wat... 154 1e-046
gb|AV916932.1|AV916932 AV916932 K. Sato unpublished cDNA li... 186 3e-046
gb|AV917322.1|AV917322 AV917322 K. Sato unpublished cDNA li... 186 3e-046
gb|BG300180.2|BG300180 HVSMEb0010M14f Hordeum vulgare seedl... 107 7e-046
gb|BQ465888.1|BQ465888 HU04P13r HU Hordeum vulgare subsp. v... 135 1e-045
gb|BQ462615.1|BQ462615 HI01H17T HI Hordeum vulgare subsp. v... 100 3e-045
gb|BQ470048.1|BQ470048 HX01J23T HX Hordeum vulgare subsp. v... 180 1e-044
gb|BI777999.2|BI777999 EBro07_SQ001_M06_R root, 3 week, red... 163 1e-044
gb|BE558923.1|BE558923 HV_CEb0020M17f Hordeum vulgare seedl... 160 2e-044
gb|CA018896.1|CA018896 HV09P14r HV Hordeum vulgare subsp. v... 132 3e-044
gb|BG415671.2|BG415671 HVSMEk0007G10f Hordeum vulgare testa... 105 4e-044
gb|BU988481.1|BU988481 HF17M10r HF Hordeum vulgare subsp. v... 158 4e-044
gb|BG367446.2|BG367446 HVSMEi0012E18f Hordeum vulgare 20 DA... 162 7e-044
gb|AL504994.1|AL504994 AL504994 Hordeum vulgare Barke roots... 153 9e-044
gb|BE214948.1|BE214948 HV_CEb0005F01f Hordeum vulgare seedl... 90 1e-043
gb|BM101004.2|BM101004 EBpi01_SQ002_J03_R pistil, 1 DPA, no... 149 1e-043
gb|BU971791.1|BU971791 HB19L01r BC Hordeum vulgare subsp. v... 173 1e-043
gb|CA020283.1|CA020283 HV14N17r HV Hordeum vulgare subsp. v... 100 2e-043
emb|AJ784275.3| Hordeum vulgare subsp. vulgare mRNA for put... 124 1e-042
gb|BI776450.2|BI776450 EBpi05_SQ001_G12_R pistil, 8 DPA, no... 173 1e-042
gb|CA032771.1|CA032771 HX14C15r HX Hordeum vulgare subsp. v... 149 2e-042
gb|BU978248.1|BU978248 HA12N04r HA Hordeum vulgare subsp. v... 136 3e-042
gb|CA025815.1|CA025815 HZ53D16r HZ Hordeum vulgare subsp. v... 96 3e-042
gb|BJ464089.1|BJ464089 BJ464089 K. Sato unpublished cDNA li... 138 4e-042
gb|CA011685.1|CA011685 HT03E08r HT Hordeum vulgare subsp. v... 93 6e-042
gb|BM372335.2|BM372335 EBro03_SQ004_K20_R root, 3 week, wat... 145 1e-041
gb|BI948363.1|BI948363 HVSMEl0009E03f Hordeum vulgare spike... 82 2e-041
gb|BM097640.2|BM097640 EBem04_SQ002_E16_R embryo, 12 DPA, n... 105 2e-041
gb|AY943294.1| Hordeum vulgare subsp. vulgare clone BAC 673... 79 7e-041
gb|CB883350.1|CB883350 HQ01P13w HQ Hordeum vulgare subsp. v... 113 1e-040
gb|CA021794.1|CA021794 HZ41C07r HZ Hordeum vulgare subsp. v... 167 1e-040
gb|BJ464341.1|BJ464341 BJ464341 K. Sato unpublished cDNA li... 78 1e-040
gb|CB878333.1|CB878333 HP08C14T HP Hordeum vulgare subsp. v... 93 5e-040
gb|BJ463669.1|BJ463669 BJ463669 K. Sato unpublished cDNA li... 75 1e-039
gb|BU995030.1|BU995030 HM08P15r HM Hordeum vulgare subsp. v... 149 3e-039
gb|CA031182.1|CA031182 HX09D22r HX Hordeum vulgare subsp. v... 138 3e-039
gb|BG367458.2|BG367458 HVSMEi0012F10f Hordeum vulgare 20 DA... 149 3e-039
gb|BM816134.1|BM816134 HC05B11_T3.ab1 HC Hordeum vulgare su... 123 4e-039
gb|BF256987.2|BF256987 HVSMEf0011I21f Hordeum vulgare seedl... 161 5e-039
gb|AV916577.1|AV916577 AV916577 K. Sato unpublished cDNA li... 158 6e-039
gb|BF261155.2|BF261155 HVSMEf0023O11f Hordeum vulgare seedl... 77 8e-039
gb|AF474072.1| Hordeum vulgare sp. vulgare cultivar Morex B... 95 1e-038
gb|BJ547039.1|BJ547039 BJ547039 K. Sato unpublished cDNA li... 107 1e-038
gb|BJ547296.1|BJ547296 BJ547296 K. Sato unpublished cDNA li... 107 1e-038
gb|AL504416.1|AL504416 AL504416 Hordeum vulgare Barke roots... 85 2e-038
gb|BI953871.1|BI953871 HVSMEm0015C01f Hordeum vulgare green... 89 2e-038
gb|CK123771.1|CK123771 BES1824105f02 BES1824 Hordeum vulgar... 94 2e-038
gb|AV833754.1|AV833754 AV833754 K. Sato unpublished cDNA li... 115 2e-038
gb|BU986612.1|BU986612 HF12G11r HF Hordeum vulgare subsp. v... 105 3e-038
gb|CA023741.1|CA023741 HZ47E09r HZ Hordeum vulgare subsp. v... 127 1e-037
gb|CA032262.1|CA032262 HX12I03r HX Hordeum vulgare subsp. v... 88 2e-037
gb|CD662706.1|CD662706 UCRHV18_02dd10_b1 Drought-stressed D... 147 3e-037
gb|BF254175.2|BF254175 HVSMEf0003D17f Hordeum vulgare seedl... 79 4e-037
gb|BU971391.1|BU971391 HB17H15r BC Hordeum vulgare subsp. v... 141 6e-037
gb|BF065248.2|BF065248 HV_CEb0024K03f Hordeum vulgare seedl... 154 1e-036
gb|CA023853.1|CA023853 HZ47J17r HZ Hordeum vulgare subsp. v... 111 1e-036
gb|CA003517.1|CA003517 HS14L18r HS Hordeum vulgare subsp. v... 127 3e-036
gb|AV836427.1|AV836427 AV836427 K. Sato unpublished cDNA li... 112 3e-036
gb|CA031139.1|CA031139 HX09C02r HX Hordeum vulgare subsp. v... 98 4e-036
gb|BF261904.2|BF261904 HV_CEa0002I16f Hordeum vulgare seedl... 119 6e-036
gb|BJ447611.1|BJ447611 BJ447611 K. Sato unpublished cDNA li... 140 1e-035
gb|BF260669.2|BF260669 HVSMEf0022K01f Hordeum vulgare seedl... 79 2e-035
gb|BU970982.1|BU970982 HB16E06r BC Hordeum vulgare subsp. v... 85 2e-035
gb|BI959357.1|BI959357 HVSMEn0019F17f Hordeum vulgare rachi... 77 3e-035
gb|BE216768.2|BE216768 HV_CEb0011I04f Hordeum vulgare seedl... 88 3e-035
gb|CA003661.1|CA003661 HS15C23r HS Hordeum vulgare subsp. v... 124 3e-035
gb|BF263242.2|BF263242 HV_CEa0006D16f Hordeum vulgare seedl... 75 4e-035
gb|BU989313.1|BU989313 HF21G08r HF Hordeum vulgare subsp. v... 133 4e-035
gb|BM441777.2|BM441777 EBed07_SQ001_I12_R endosperm, 28 DPA... 148 5e-035
gb|BJ468873.1|BJ468873 BJ468873 K. Sato unpublished cDNA li... 79 5e-035
gb|CK123279.1|CK123279 BES1824103c15 BES1824 Hordeum vulgar... 90 1e-034
gb|BQ765210.1|BQ765210 EBro03_SQ006_D18_R root, 3 week, wat... 79 1e-034
gb|BI952975.1|BI952975 HVSMEm0008M21f Hordeum vulgare green... 131 1e-034
gb|BF618611.2|BF618611 HVSMEc0006K17f Hordeum vulgare seedl... 73 2e-034
gb|BQ766503.1|BQ766503 EBro08_SQ006_D08_R root, 3 week, dro... 97 2e-034
gb|BU998735.1|BU998735 HI12A05r HI Hordeum vulgare subsp. v... 99 3e-034
gb|BI776309.2|BI776309 EBem04_SQ001_I07_R embryo, 12 DPA, n... 91 5e-034
gb|BF266592.2|BF266592 HV_CEa0015I18f Hordeum vulgare seedl... 145 5e-034
gb|CK123885.1|CK123885 BES1824105o18 BES1824 Hordeum vulgar... 63 5e-034
gb|AV914493.1|AV914493 AV914493 K. Sato unpublished cDNA li... 77 6e-034
gb|CA014211.1|CA014211 HT10L08r HT Hordeum vulgare subsp. v... 140 9e-034
gb|AV927561.1|AV927561 AV927561 K. Sato unpublished cDNA li... 88 1e-033
gb|AF085166.1|AF085166 Hordeum vulgare receptor-like kinase... 115 2e-033
gb|AV833420.1|AV833420 AV833420 K. Sato unpublished cDNA li... 81 2e-033
gb|AF085167.1|AF085167 Hordeum vulgare receptor-like kinase... 115 3e-033
gb|BJ447136.1|BJ447136 BJ447136 K. Sato unpublished cDNA li... 79 3e-033
gb|BJ446879.1|BJ446879 BJ446879 K. Sato unpublished cDNA li... 79 3e-033
gb|BG344214.1|BG344214 HVSMEg0008C18f Hordeum vulgare pre-a... 134 3e-033
gb|BJ450289.1|BJ450289 BJ450289 K. Sato unpublished cDNA li... 131 3e-033
gb|BJ462781.1|BJ462781 BJ462781 K. Sato unpublished cDNA li... 81 4e-033
gb|AF085164.1|AF085164 Hordeum vulgare receptor-like kinase... 81 5e-033
gb|BI954047.1|BI954047 HVSMEm0015P18f Hordeum vulgare green... 80 7e-033
gb|BJ452111.1|BJ452111 BJ452111 K. Sato unpublished cDNA li... 83 8e-033
gb|BU973230.1|BU973230 HB24D05r BC Hordeum vulgare subsp. v... 141 8e-033
gb|DW474948.1|DW474948 25-u184 Subtracted libraries from ep... 114 9e-033
gb|BF258327.3|BF258327 HVSMEf0015G22f Hordeum vulgare seedl... 140 1e-032
gb|BG367673.1|BG367673 HVSMEi0013D04f Hordeum vulgare 20 DA... 83 1e-032
gb|AV932635.1|AV932635 AV932635 K. Sato unpublished cDNA li... 107 2e-032
gb|CB877039.1|CB877039 HP03F15T HP Hordeum vulgare subsp. v... 73 2e-032
gb|BU977391.1|BU977391 HA11F10r HA Hordeum vulgare subsp. v... 84 3e-032
gb|BU987697.1|BU987697 HF15I03r HF Hordeum vulgare subsp. v... 73 4e-032
gb|AV836793.1|AV836793 AV836793 K. Sato unpublished cDNA li... 138 6e-032
gb|BI948692.1|BI948692 HVSMEl0010I13f Hordeum vulgare spike... 69 6e-032
gb|BQ763144.1|BQ763144 EBro02_SQ007_I08_R root, 3 week, hyd... 84 1e-031
gb|AV924319.1|AV924319 AV924319 K. Sato unpublished cDNA li... 83 1e-031
gb|BM816713.1|BM816713 HC114E03_SK.ab1 HC Hordeum vulgare s... 59 1e-031
gb|BQ464358.1|BQ464358 HF02A21r HF Hordeum vulgare subsp. v... 85 1e-031
gb|AV917399.1|AV917399 AV917399 K. Sato unpublished cDNA li... 73 1e-031
gb|BE216031.3|BE216031 HV_CEb0009C21f Hordeum vulgare seedl... 115 2e-031
gb|CA011695.1|CA011695 HT03E18r HT Hordeum vulgare subsp. v... 90 2e-031
gb|BJ450092.1|BJ450092 BJ450092 K. Sato unpublished cDNA li... 92 2e-031
gb|BQ765999.1|BQ765999 EBro03_SQ008_C19_R root, 3 week, wat... 74 4e-031
gb|BI952328.1|BI952328 HVSMEm0005P11f Hordeum vulgare green... 126 5e-031
gb|BU983256.1|BU983256 HA29B10r HA Hordeum vulgare subsp. v... 135 5e-031
gb|BM444145.1|BM444145 EBem09_SQ004_E19_R embryo, 1 Day ger... 80 7e-031
gb|BE216579.2|BE216579 HV_CEb0010N22f Hordeum vulgare seedl... 79 7e-031
gb|BQ758677.1|BQ758677 EBma07_SQ002_B13_R maternal, 21 DPA,... 134 7e-031
gb|BE231106.2|BE231106 HVSMEg0016L07f Hordeum vulgare pre-a... 73 1e-030
gb|BJ453536.1|BJ453536 BJ453536 K. Sato unpublished cDNA li... 79 1e-030
gb|AL504247.1|AL504247 AL504247 Hordeum vulgare Barke roots... 62 2e-030
gb|BI953631.1|BI953631 HVSMEm0013K08f Hordeum vulgare green... 77 2e-030
gb|BF260175.2|BF260175 HVSMEf0021E22f Hordeum vulgare seedl... 83 2e-030
gb|AV924320.1|AV924320 AV924320 K. Sato unpublished cDNA li... 79 2e-030
gb|AV923555.1|AV923555 AV923555 K. Sato unpublished cDNA li... 73 2e-030
gb|BQ764974.1|BQ764974 EBca01_SQ005_M12_R carpel, pre-anthe... 73 2e-030
gb|BQ470244.1|BQ470244 HX02D24r HX Hordeum vulgare subsp. v... 77 3e-030
gb|CD663034.1|CD663034 UCRHV18_04ac05_b1 Drought-stressed D... 132 3e-030
gb|BG414353.2|BG414353 HVSMEk0001M01f Hordeum vulgare testa... 118 4e-030
gb|AV916201.1|AV916201 AV916201 K. Sato unpublished cDNA li... 75 5e-030
gb|BE558296.2|BE558296 HV_CEb0017B21f Hordeum vulgare seedl... 84 8e-030
gb|BI951840.1|BI951840 HVSMEm0003C19f Hordeum vulgare green... 94 1e-029
emb|AJ630116.2| Hordeum vulgare subsp. vulgare mRNA for Lys... 130 1e-029
gb|AL450804.1|AL450804 AL450804 Hordeum vulgare Barke etiol... 48 1e-029
gb|BF621513.3|BF621513 HVSMEa0011D21f Hordeum vulgare seedl... 130 2e-029
gb|CD663430.1|CD663430 UCRHV18_05bh04_b1 Drought-stressed D... 83 2e-029
gb|AV910535.1|AV910535 AV910535 K. Sato unpublished cDNA li... 90 2e-029
gb|BQ463260.1|BQ463260 HI04J01r HI Hordeum vulgare subsp. v... 121 2e-029
gb|BQ465158.1|BQ465158 HU02N02r HU Hordeum vulgare subsp. v... 69 4e-029
gb|BU971659.1|BU971659 HB19E12r BC Hordeum vulgare subsp. v... 84 5e-029
gb|BU999028.1|BU999028 HI12P05r HI Hordeum vulgare subsp. v... 64 8e-029
gb|BM376497.2|BM376497 EBem05_SQ002_G09_R embryo, 14 DPA, n... 127 1e-028
gb|BJ471768.1|BJ471768 BJ471768 K. Sato unpublished cDNA li... 79 1e-028
gb|BE194495.3|BE194495 HVSMEh0085M10f Hordeum vulgare 5-45 ... 78 1e-028
gb|BU993932.1|BU993932 HM05A09r HM Hordeum vulgare subsp. v... 90 3e-028
gb|BM096708.2|BM096708 EBma07_SQ001_E18_R maternal, 21 DPA,... 126 3e-028
gb|CB878070.1|CB878070 HP07D18T HP Hordeum vulgare subsp. v... 126 3e-028
gb|CB879642.1|CB879642 HP03C03w HP Hordeum vulgare subsp. v... 77 3e-028
gb|AF509747.1| Hordeum vulgare subsp. vulgare stem rust res... 54 4e-028
gb|AL503407.1|AL503407 AL503407 Hordeum vulgare Barke roots... 71 4e-028
gb|DQ352178.1| Hordeum vulgare subsp. vulgare rust resistan... 48 4e-028
gb|CA024256.1|CA024256 HZ48M21r HZ Hordeum vulgare subsp. v... 76 5e-028
gb|AL505939.1|AL505939 AL505939 Hordeum vulgare Barke roots... 71 5e-028
gb|BU998515.1|BU998515 HI11E21r HI Hordeum vulgare subsp. v... 52 8e-028
gb|BE558792.2|BE558792 HV_CEb0020G08f Hordeum vulgare seedl... 84 9e-028
gb|BE438069.1|BE438069 SFR010.E06F990519 ITEC SFR Barley Le... 83 9e-028
gb|BG366053.1|BG366053 HVSMEi0005A08f Hordeum vulgare 20 DA... 79 1e-027
gb|BF266777.2|BF266777 HV_CEa0016A13f Hordeum vulgare seedl... 123 1e-027
gb|BJ457712.1|BJ457712 BJ457712 K. Sato unpublished cDNA li... 112 2e-027
gb|BM372002.2|BM372002 EBma08_SQ004_K12_R maternal, 28 DPA,... 72 2e-027
gb|BQ760737.1|BQ760737 EBro03_SQ003_F10_R root, 3 week, wat... 73 2e-027
gb|BM098115.2|BM098115 EBpi03_SQ002_J13_R pistil, 4 DPA, no... 51 2e-027
gb|BQ762476.1|BQ762476 EBro01_SQ005_P23 _R root, 3 week, hy... 103 2e-027
gb|AV833368.1|AV833368 AV833368 K. Sato unpublished cDNA li... 79 2e-027
gb|BM374347.2|BM374347 EBpi03_SQ003_G01_R pistil, 4 DPA, no... 72 3e-027
gb|BM816135.1|BM816135 HC05B12_T3.ab1 HC Hordeum vulgare su... 122 3e-027
gb|BF629255.2|BF629255 HVSMEb0010I11f Hordeum vulgare seedl... 69 3e-027
gb|BQ465537.1|BQ465537 HU03P03r HU Hordeum vulgare subsp. v... 63 5e-027
gb|BQ765808.1|BQ765808 EBro03_SQ008_A09_R root, 3 week, wat... 83 6e-027
gb|BI958203.1|BI958203 HVSMEn0013N15f Hordeum vulgare rachi... 68 6e-027
gb|BI958688.1|BI958688 HVSMEn0016D19f Hordeum vulgare rachi... 64 6e-027
gb|BJ472070.1|BJ472070 BJ472070 K. Sato unpublished cDNA li... 107 9e-027
gb|AV932343.1|AV932343 AV932343 K. Sato unpublished cDNA li... 107 9e-027
gb|BJ470112.1|BJ470112 BJ470112 K. Sato unpublished cDNA li... 107 9e-027
gb|AV932334.1|AV932334 AV932334 K. Sato unpublished cDNA li... 107 9e-027
gb|BJ472069.1|BJ472069 BJ472069 K. Sato unpublished cDNA li... 107 1e-026
gb|BQ760867.1|BQ760867 EBro03_SQ003_L05_R root, 3 week, wat... 100 1e-026
gb|AU252264.1|AU252264 AU252264 salt-stressed barley root c... 86 1e-026
gb|BG369831.1|BG369831 HVSMEi0026D06f Hordeum vulgare 20 DA... 90 1e-026
gb|CA029558.1|CA029558 HZ65J01r HZ Hordeum vulgare subsp. v... 120 1e-026
gb|BQ462607.1|BQ462607 HI01H07T HI Hordeum vulgare subsp. v... 120 2e-026
gb|BQ464898.1|BQ464898 HU02B07r HU Hordeum vulgare subsp. v... 111 2e-026
gb|BF620215.2|BF620215 HVSMEc0019A20f Hordeum vulgare seedl... 73 2e-026
gb|AY115550.1| Hordeum vulgare subsp. vulgare stem rust res... 54 2e-026
gb|BU986512.1|BU986512 HF12B10r HF Hordeum vulgare subsp. v... 70 3e-026
gb|BU999237.1|BU999237 HI13N22r HI Hordeum vulgare subsp. v... 70 3e-026
gb|CA030048.1|CA030048 HX05O22r HX Hordeum vulgare subsp. v... 99 5e-026
gb|BQ764108.1|BQ764108 EBro03_SQ006_E12_R root, 3 week, wat... 79 5e-026
gb|BQ766190.1|BQ766190 EBro08_SQ005_E08_R root, 3 week, dro... 76 8e-026
gb|AV836502.1|AV836502 AV836502 K. Sato unpublished cDNA li... 72 8e-026
gb|CA008493.1|CA008493 HU11C07r HU Hordeum vulgare subsp. v... 54 8e-026
gb|AJ427599.1|AJ427599 AJ427599 Hordeum vulgare subsp. vulg... 77 9e-026
gb|BG366406.1|BG366406 HVSMEi0006P01f Hordeum vulgare 20 DA... 117 9e-026
gb|BQ768693.1|BQ768693 EBro08_SQ012_M08_R root, 3 week, dro... 101 1e-025
gb|BQ465859.1|BQ465859 HU04O06r HU Hordeum vulgare subsp. v... 72 1e-025
gb|CA025597.1|CA025597 HZ52J19r HZ Hordeum vulgare subsp. v... 84 1e-025
gb|BM370583.2|BM370583 EBro08_SQ004_K14_R root, 3 week, dro... 76 1e-025
gb|BJ447735.1|BJ447735 BJ447735 K. Sato unpublished cDNA li... 63 2e-025
gb|BU967283.1|BU967283 HB03N04r BC Hordeum vulgare subsp. v... 71 3e-025
gb|CA014046.1|CA014046 HT10D18r HT Hordeum vulgare subsp. v... 76 6e-025
gb|AV922658.1|AV922658 AV922658 K. Sato unpublished cDNA li... 107 7e-025
gb|BU999264.1|BU999264 HI13P15r HI Hordeum vulgare subsp. v... 71 7e-025
gb|BQ768749.1|BQ768749 EBro08_SQ012_G15_R root, 3 week, dro... 69 9e-025
gb|BF266815.2|BF266815 HV_CEa0016C07f Hordeum vulgare seedl... 74 1e-024
gb|BQ763286.1|BQ763286 EBro02_SQ007_G23_R root, 3 week, hyd... 68 1e-024
gb|CB875711.1|CB875711 HX09C02w HX Hordeum vulgare subsp. v... 98 1e-024
gb|BJ462089.1|BJ462089 BJ462089 K. Sato unpublished cDNA li... 70 1e-024
gb|BI779034.2|BI779034 EBro01_SQ002_K16_R root, 3 week, hyd... 55 3e-024
gb|BU966755.1|BU966755 HB02E05r BC Hordeum vulgare subsp. v... 71 4e-024
gb|BF259873.2|BF259873 HVSMEf0020H24f Hordeum vulgare seedl... 69 4e-024
gb|BI951471.1|BI951471 HVSMEm0001A20f Hordeum vulgare green... 75 6e-024
gb|BJ465430.1|BJ465430 BJ465430 K. Sato unpublished cDNA li... 74 8e-024
gb|BF617106.3|BF617106 HVSMEc0014J24f Hordeum vulgare seedl... 94 9e-024
gb|BF267637.1|BF267637 HV_CEa0018H17f Hordeum vulgare seedl... 110 2e-023
gb|BG310192.1|BG310192 HVSMEc0016G18f Hordeum vulgare seedl... 68 2e-023
gb|BI954170.1|BI954170 HVSMEm0016H15f Hordeum vulgare green... 56 3e-023
gb|BU990590.1|BU990590 HF25H22r HF Hordeum vulgare subsp. v... 72 3e-023
gb|BU989324.1|BU989324 HF21G22r HF Hordeum vulgare subsp. v... 72 3e-023
gb|BQ754339.1|BQ754339 EBca01_SQ003_K05_R carpel, pre-anthe... 55 4e-023
gb|CA024753.1|CA024753 HZ50D08r HZ Hordeum vulgare subsp. v... 64 4e-023
gb|BF264460.2|BF264460 HV_CEa0009H19f Hordeum vulgare seedl... 83 5e-023
gb|BE603119.2|BE603119 HVSMEh0102B06f Hordeum vulgare 5-45 ... 74 5e-023
gb|BG367586.2|BG367586 HVSMEi0012M21f Hordeum vulgare 20 DA... 78 7e-023
gb|BQ462635.1|BQ462635 HI01I17T HI Hordeum vulgare subsp. v... 68 7e-023
gb|BF256991.2|BF256991 HVSMEf0011J01f Hordeum vulgare seedl... 81 9e-023
gb|BU984997.1|BU984997 HF05N06r HF Hordeum vulgare subsp. v... 60 9e-023
gb|BU984123.1|BU984123 HF03A23r HF Hordeum vulgare subsp. v... 60 9e-023
gb|BJ474402.1|BJ474402 BJ474402 K. Sato unpublished cDNA li... 67 1e-022
gb|BI780740.2|BI780740 EBes01_SQ002_A07_R embryo sac, 4-6 D... 71 1e-022
gb|BE455810.2|BE455810 HVSMEg0015F01f Hordeum vulgare pre-a... 100 1e-022
gb|BJ544387.1|BJ544387 BJ544387 K. Sato unpublished cDNA li... 81 1e-022
gb|BJ462433.1|BJ462433 BJ462433 K. Sato unpublished cDNA li... 77 1e-022
gb|BJ466365.1|BJ466365 BJ466365 K. Sato unpublished cDNA li... 63 2e-022
gb|BM440918.2|BM440918 EBca01_SQ001_P03_R carpel, pre-anthe... 65 3e-022
gb|BI959662.1|BI959662 HVSMEn0020K15f Hordeum vulgare rachi... 64 4e-022
gb|BF266005.3|BF266005 HV_CEa0013O12f Hordeum vulgare seedl... 94 5e-022
gb|AV914923.1|AV914923 AV914923 K. Sato unpublished cDNA li... 47 6e-022
gb|BQ756172.1|BQ756172 EBem05_SQ002_G10_R embryo, 14 DPA, n... 45 6e-022
gb|BQ762002.1|BQ762002 EBpi01_SQ005_D13_R pistil, 1 DPA, no... 51 6e-022
gb|BM372170.2|BM372170 EBro03_SQ004_D12_R root, 3 week, wat... 63 6e-022
gb|BQ463475.1|BQ463475 HI05G06r HI Hordeum vulgare subsp. v... 52 8e-022
gb|BI778695.2|BI778695 EBro01_SQ001_C01_R root, 3 week, hyd... 70 8e-022
gb|AV929413.1|AV929413 AV929413 K. Sato unpublished cDNA li... 74 9e-022
gb|BQ660686.1|BQ660686 HI04O18u HI Hordeum vulgare subsp. v... 86 9e-022
gb|BQ463066.1|BQ463066 HI02O21r HI Hordeum vulgare subsp. v... 86 9e-022
gb|BQ463348.1|BQ463348 HI04O18r HI Hordeum vulgare subsp. v... 86 9e-022
gb|BQ660511.1|BQ660511 HI02O21u HI Hordeum vulgare subsp. v... 86 9e-022
gb|BQ753651.1|BQ753651 EBan01_SQ004_N18_R anther, yellow st... 66 1e-021
gb|BF629141.2|BF629141 HVSMEb0010B01f Hordeum vulgare seedl... 73 1e-021
gb|AF305912.1|AF305912 Hordeum vulgare EDR1 (EDR1) mRNA, co... 49 1e-021
gb|AW983189.3|AW983189 HVSMEg0008J16f Hordeum vulgare pre-a... 75 2e-021
gb|BF628618.2|BF628618 HVSMEb0006M10f Hordeum vulgare seedl... 103 2e-021
gb|CB877449.1|CB877449 HP04P08T HP Hordeum vulgare subsp. v... 51 2e-021
gb|AV937128.1|AV937128 AV937128 K. Sato unpublished cDNA li... 74 2e-021
gb|CW512175.1|CW512175 ToNAR_Steptoe_99c Steptoe Exon trapp... 69 2e-021
gb|AV832457.1|AV832457 AV832457 K. Sato unpublished cDNA li... 86 4e-021
gb|BF625700.2|BF625700 HVSMEa0013F01f Hordeum vulgare seedl... 78 5e-021
gb|BM444583.1|BM444583 EBem09_SQ005_M19_R embryo, 1 Day ger... 59 7e-021
gb|AL505460.1|AL505460 AL505460 Hordeum vulgare Barke roots... 62 8e-021
gb|AV833026.1|AV833026 AV833026 K. Sato unpublished cDNA li... 65 8e-021
gb|AV925996.1|AV925996 AV925996 K. Sato unpublished cDNA li... 76 8e-021
>gb|AV913572.1|AV913572 AV913572 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags22i21 5', mRNA sequence
Length = 634
Score = 419 bits (909), Expect(2) = e-125
Identities = 175/190 (92%), Positives = 184/190 (96%)
Frame = +2 / +1
Query: 134 KQMKGLDRFFDRELEILGSVKHRYLVNLRGYCNSPSSKLLIYDYLQGGSLDEVLHEKSEQ 313
K +G D+FFDRELEILGSVKHR LVNLRGYCNSPSSKLLIYDYL GGSLDEVLHEK+EQ
Sbjct: 64 KTNEGRDKFFDRELEILGSVKHRNLVNLRGYCNSPSSKLLIYDYLPGGSLDEVLHEKTEQ 243
Query: 314 LDWDARINIILGAAKGLSYLHHDCSPRIIHRDIKSSNILLDGSFEARVSDFGLAKLLEDE 493
L+W+ARINIILGAAKGL+YLHHDCSPRIIHRDIKSSNILLDG+FE+RVSDFGLAKLLEDE
Sbjct: 244 LEWEARINIILGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNFESRVSDFGLAKLLEDE 423
Query: 494 ESHITTIVAGTFGYLAPEYMQFGRATEKTDVYSFGVLVLEILSGKRPTDASFIEKGLNIV 673
ESHITTIVAGTFGYLAPEYMQ GRATEKTDVYSFGVLVLEILSGKRPTDASFIEKGLNIV
Sbjct: 424 ESHITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEILSGKRPTDASFIEKGLNIV 603
Query: 674 GWLNFLAGEN 703
GWLNFLAGE+
Sbjct: 604 GWLNFLAGES 633
Score = 281 bits (608), Expect(2) = 1e-082
Identities = 119/181 (65%), Positives = 144/181 (79%)
Frame = -3 / -2
Query: 700 LASQKI*PSNNV*SLLNEGCIGRSLSAEYFKYQNPKTVDIGLLGGSAKLHILWRKITKCS 521
L Q++*PS+NV LL+E +GR LS +Y +YQN KTVD+ L G A LH+LWRKI KCS
Sbjct: 630 LPGQEV*PSHNVQPLLDE*RVGRPLSTQYLQYQNSKTVDVRLFGSPATLHVLWRKIAKCS 451
Query: 520 CNYCSDMGFFVL*KLCKSKV*YAGLKTAVKQDVARLDITMYYSRRTIVMQVRQAFCSSKY 341
CNYCSDM FF+L* C+S+V*Y K A++ D+ARL+ITMYYSR IVMQV QAFCSSKY
Sbjct: 450 CNYCSDMRFFIL**FCESEV*YT*FKIAIE*DIARLNITMYYSR*AIVMQVSQAFCSSKY 271
Query: 340 DVNTCIPIQLFRLFMQHFIQASTLKIIIYQKF**RRVAITTKIDQVTMFNTSQYLKFSIK 161
VN+C+P QLF FM HFIQA T K++IYQ+F**R +AI T+IDQ+T+ NTSQYLKFSIK
Sbjct: 270 YVNSCLPFQLFSFFM*HFIQAPTWKVVIYQQF**RGIAIATEIDQITVLNTSQYLKFSIK 91
Query: 160 E 158
E
Sbjct: 90 E 88
Score = 255 bits (552), Expect(2) = 5e-073
Identities = 121/183 (66%), Positives = 129/183 (70%)
Frame = +3 / +2
Query: 153 IGSLIENLRYWEVLNIVTWSIFVVIATLLHQNF*YMIIFKVEAWMKCCMKSLNSWIGMHV 332
I SLIENLRYWEVL+ V WSI V IA LHQN *YM F+V AWMKC MK LNSW G H
Sbjct: 83 INSLIENLRYWEVLSTVIWSISVAIAIPLHQNC*YMTTFQVGAWMKCYMKKLNSWNGRHE 262
Query: 333 LTSYLELQKACLTCITIVRLE*YIVISSRATSCLTAVLRPAYQTLDLQSF*RTKNPISLQ 512
LT YLELQKA LTCITI LE*YIVI SRA S A+L YQT D Q++*R KN ISLQ
Sbjct: 263 LT*YLELQKAWLTCITIAHLE*YIVILSRAISYSMAILNHVYQTSDSQNY*RMKNLISLQ 442
Query: 513 *LQEHLVILRQSICSLAEPPRRPMSTVLGFWYLKYSAESDLPMHPSLRRD*TLLDG*IFW 692
*LQEHL ILRQS C +A P+R STVL FWY +Y ES LP S RR *TL DG* W
Sbjct: 443 *LQEHLAILRQSTCKVAGLPKRRTSTVLEFWYWRY*VESGLPTRHSSRRG*TLWDG*TSW 622
Query: 693 LAR 701
R
Sbjct: 623 PGR 631
Score = 254 bits (549), Expect(2) = 3e-074
Identities = 118/181 (65%), Positives = 132/181 (72%)
Frame = -2 / -1
Query: 701 SRQPENLTIQQCLIPSQ*RMHR*VAFR*VFQVPEPQNCRHRSSRWLCQTAYTLAQDNQMF 522
S +P +L I QC PS+* R* AF V VP+ QNCR S R C A TLAQD+QMF
Sbjct: 631 SPRPRSLAIPQCSTPSR*MTRR*AAFHSVSPVPKLQNCRRPSFR*PCHFACTLAQDSQMF 452
Query: 521 LQLL**YGILRPLKALQVQSLIRGPQNCRQARCCST*YHDVLFEANNRDASKTSLLQLQV 342
LQLL**Y IL PL L+V+SLI QNC + R CST*YHDVLFE +NRDASK LLQLQV
Sbjct: 451 LQLL**YEILHPLVVLRVRSLIHVIQNCHRVRYCST*YHDVLFEVSNRDASKPGLLQLQV 272
Query: 341 *C*YVHPNPTVQTFHAALHPGFHLEDNHISKVLMKESCNNHED*PSNDV*HFPISQVLYQ 162
C*+V P PTVQ FH ALHPG HLE +HIS VLMK +CN+H D*P+ *HFPISQVLYQ
Sbjct: 271 LC*FVPPIPTVQFFHVALHPGSHLEGSHISTVLMKGNCNSHGD*PNYGA*HFPISQVLYQ 92
Query: 161 R 159
R
Sbjct: 91 R 89
Score = 229 bits (494), Expect(2) = 1e-078
Identities = 102/125 (81%), Positives = 109/125 (87%)
Frame = -1 / -3
Query: 699 SPARKFNHPTMFNPFSMKDASVGRFPLSISSTRTPKL*TSVFSVALPNCIYSGAR*PNVP 520
SPA+KF+HPTMFNPFSM DASVGRFPLSISST+TPKL*TSVFSVALP C+YSGAR*PNVP
Sbjct: 629 SPAKKFSHPTMFNPFSMNDASVGRFPLSISSTKTPKL*TSVFSVALPLCMYSGAR*PNVP 450
Query: 519 ATIVVIWDXXXXXXXXXXXSDTRASKLPSSKMLLDLISRCIIRGEQS*CK*DKPFAAPSM 340
ATIVVI D SDTR SKLPSSK+LLDLISRCIIRGEQS*CK* +PFAAPS+
Sbjct: 449 ATIVVI*DSSSSSSFASPKSDTRDSKLPSSKILLDLISRCIIRGEQS*CK*ARPFAAPSI 270
Query: 339 MLIRA 325
MLIRA
Sbjct: 269 MLIRA 255
Score = 222 bits (480), Expect(3) = 5e-063
Identities = 101/152 (66%), Positives = 114/152 (75%)
Frame = +1 / +3
Query: 238 FIKTFDI*LSSRWKPG*SAA*KV*TVGLGCTY*HHTWSCKRLVLLASRLFASNNTS*YQV 417
FIKT DI*L SRW+PG*SA *K *TVG+G T *H+TWSCKR LLASRL SNNTS*Y V
Sbjct: 168 FIKTVDI*LPSRWEPG*SAT*KN*TVGMGGTN*HNTWSCKRPGLLASRLLTSNNTS*Y*V 347
Query: 418 EQHLA*RQF*GPRIRLWTCKAFRGRRIPYHYNSCRNIWLSCARVYAVWQSHREDRCLQFW 597
EQ+L QF* IRL T K RG RI YHYNSCRNIWLSCARV+A WQ +R+D LQFW
Sbjct: 348 EQYLTRWQF*ITCIRLRTRKTTRG*RISYHYNSCRNIWLSCARVHAKWQGYRKDGRLQFW 527
Query: 598 GSGT*NTQRKATYRCILH*EGIKHCWMVKFSG 693
GT +T+ KA YR ++H EG++HC M K G
Sbjct: 528 SFGTGDTEWKAAYRRVIHREGVEHCGMAKLLG 623
Score = 85.4 bits (180), Expect(2) = 1e-078
Identities = 38/51 (74%), Positives = 40/51 (78%)
Frame = -1 / -3
Query: 258 YIKSFDEGELQ*PRRLTK*RCLTLPNISSSLSKNRSRPFICFHYSFQSKDI 106
YI SFDEGELQ*PRRLTK RCLTLPNISSSLSKN SRP F F +K +
Sbjct: 188 YINSFDEGELQ*PRRLTKLRCLTLPNISSSLSKNLSRPSFVFTILFNAKTL 36
Score = 51.0 bits (105), Expect(2) = e-125
Identities = 21/24 (87%), Positives = 22/24 (91%)
Frame = +1 / +1
Query: 76 TVYKLQMDDGNVLALKRIVKTNEG 147
TVYKL MDDG+V ALKRIVKTNEG
Sbjct: 7 TVYKLAMDDGSVFALKRIVKTNEG 78
Score = 46.4 bits (95), Expect(2) = 1e-082
Identities = 16/24 (66%), Positives = 20/24 (83%)
Frame = -1 / -2
Query: 147 PFICFHYSFQSKDIAIIHLQFINS 76
PFICFHY FQ K+ AIIH +F++S
Sbjct: 78 PFICFHYPFQCKNAAIIHCKFVHS 7
Score = 45.5 bits (93), Expect(2) = 3e-074
Identities = 20/24 (83%), Positives = 21/24 (87%)
Frame = -2 / -3
Query: 146 PSFVFTILFKARTLPSSICSL*TV 75
PSFVFTILF A+TLPSSI SL TV
Sbjct: 77 PSFVFTILFNAKTLPSSIASLYTV 6
Score = 40.0 bits (81), Expect(2) = 5e-073
Identities = 17/26 (65%), Positives = 20/26 (76%)
Frame = +3 / +3
Query: 75 NCL*TANG*WQCPCFEKNSENK*RV* 152
+C+ T NG*WQ C EK+SENK*R *
Sbjct: 6 DCVQTCNG*WQRFCIEKDSENK*RA* 83
Score = 31.8 bits (63), Expect(3) = 5e-063
Identities = 16/25 (64%), Positives = 18/25 (72%)
Frame = +2 / +2
Query: 77 LFINCKWMMAMSLL*KE**KQMKGL 151
L N +WMMA L *K **KQMKG+
Sbjct: 8 LCTNLQWMMAAFLH*KG**KQMKGV 82
Score = 26.3 bits (51), Expect(3) = 5e-063
Identities = 12/13 (92%), Positives = 13/13 (100%)
Frame = +1 / +3
Query: 157 VL**RT*DIGKC* 195
+L**RT*DIGKC*
Sbjct: 87 IL**RT*DIGKC* 125
>gb|BU980696.1|BU980696 HA21G18r HA Hordeum vulgare subsp. vulgare cDNA clone HA21G18
5-PRIME, mRNA sequence
Length = 504
Score = 362 bits (785), Expect = 2e-099
Identities = 155/166 (93%), Positives = 160/166 (96%)
Frame = +2 / +3
Query: 392 RIIHRDIKSSNILLDGSFEARVSDFGLAKLLEDEESHITTIVAGTFGYLAPEYMQFGRAT 571
R IHRDIKSSNILLDG+FE+RVSDFGLAKLLEDEESHITTIVAGTFGYLAPEYMQ GRAT
Sbjct: 6 RGIHRDIKSSNILLDGNFESRVSDFGLAKLLEDEESHITTIVAGTFGYLAPEYMQSGRAT 185
Query: 572 EKTDVYSFGVLVLEILSGKRPTDASFIEKGLNIVGWLNFLAGENREREIVDLNCEGVHTE 751
EKTDVYSFGVLVLEILSGKRPTDASFIEKGLNIVGWLNFLAGE+REREIVD +C+GV E
Sbjct: 186 EKTDVYSFGVLVLEILSGKRPTDASFIEKGLNIVGWLNFLAGESREREIVDPDCDGVQIE 365
Query: 752 TLDALLSLAKQCVSSLPEERPTMHRVVQMLESDVITPCPSDFYDSE 889
TLDALLSLAKQCVSSLPEERPTMHRVVQMLESDVITPC SDFYDSE
Sbjct: 366 TLDALLSLAKQCVSSLPEERPTMHRVVQMLESDVITPCGSDFYDSE 503
Score = 306 bits (662), Expect = 2e-082
Identities = 137/166 (82%), Positives = 144/166 (86%)
Frame = -1 / -3
Query: 888 SES*KSLGHGVITSDSSICTTLCIVGRSSGKELTHCLARESRASKVSVCTPSQFRSTISL 709
SES*KSL HGVITSDSSICTTLCIVGRSSGKELTHCLARESRAS+VS+CTPSQ STIS
Sbjct: 502 SES*KSLPHGVITSDSSICTTLCIVGRSSGKELTHCLARESRASRVSICTPSQSGSTISR 323
Query: 708 SRFSPARKFNHPTMFNPFSMKDASVGRFPLSISSTRTPKL*TSVFSVALPNCIYSGAR*P 529
S SPA+KF+HPTMFNPFSM DASVGRFPLSISST+TPKL*TSVFSVALP C+YSGAR*P
Sbjct: 322 SLLSPAKKFSHPTMFNPFSMNDASVGRFPLSISSTKTPKL*TSVFSVALPLCMYSGAR*P 143
Query: 528 NVPATIVVIWDXXXXXXXXXXXSDTRASKLPSSKMLLDLISRCIIR 391
NVPATIVVI D SDTR SKLPSSK+LLDLISRCI R
Sbjct: 142 NVPATIVVI*DSSSSSSFASPKSDTRDSKLPSSKILLDLISRCIPR 5
Score = 259 bits (560), Expect = 2e-068
Identities = 110/166 (66%), Positives = 130/166 (78%)
Frame = -3 / -2
Query: 889 L*IVEVARARRNYIRLQHLYHPVHRRPLLRQRADTLLGEREQSVQGLGVHSFTIQIDDFP 710
L*IVE+A ARRNYIRLQHLYHPVHRRPLLRQRA LLGEREQ VQGL +H+ I+I D P
Sbjct: 503 L*IVEIATARRNYIRLQHLYHPVHRRPLLRQRAHALLGEREQGVQGLDLHAVAIRIHDLP 324
Query: 709 LPVLASQKI*PSNNV*SLLNEGCIGRSLSAEYFKYQNPKTVDIGLLGGSAKLHILWRKIT 530
L L Q++*PS+NV LL+E +GR LS +Y +YQN KTVD+ L G A LH+LWRKI
Sbjct: 323 LSALPGQEV*PSHNVQPLLDE*RVGRPLSTQYLQYQNSKTVDVRLFGSPATLHVLWRKIA 144
Query: 529 KCSCNYCSDMGFFVL*KLCKSKV*YAGLKTAVKQDVARLDITMYYS 392
KCSCNYCSDM FF+L* C+S+V*Y K A++ D+ARL+ITMY S
Sbjct: 143 KCSCNYCSDMRFFIL**FCESEV*YT*FKIAIE*DIARLNITMYSS 6
Score = 233 bits (504), Expect = 1e-060
Identities = 109/168 (64%), Positives = 118/168 (70%)
Frame = +3 / +1
Query: 387 RLE*YIVISSRATSCLTAVLRPAYQTLDLQSF*RTKNPISLQ*LQEHLVILRQSICSLAE 566
R E YIVI SRA S A+L YQT D Q++*R KN ISLQ*LQEHL ILRQS C +A
Sbjct: 1 RHEEYIVILSRAISYSMAILNHVYQTSDSQNY*RMKNLISLQ*LQEHLAILRQSTCKVAG 180
Query: 567 PPRRPMSTVLGFWYLKYSAESDLPMHPSLRRD*TLLDG*IFWLARTGRGKSSI*IVKECT 746
P+R STVL FWY +Y ES LP S RR *TL DG* W R G+S I I C
Sbjct: 181 LPKRRTSTVLEFWYWRY*VESGLPTRHSSRRG*TLWDG*TSWPGRAESGRSWIRIATACR 360
Query: 747 PRPWTLCSLSPSSVSALCRRSGRRCTGWYRCWSRM*LRRALATSTIQS 890
RPWT CSLSPS+ ALCRRSGRRCTGWYRCWSRM*LRRA+A STIQS
Sbjct: 361 SRPWTPCSLSPSNA*ALCRRSGRRCTGWYRCWSRM*LRRAVAISTIQS 504
Score = 197 bits (424), Expect = 1e-049
Identities = 93/166 (56%), Positives = 107/166 (64%)
Frame = +1 / +2
Query: 391 SNNTS*YQVEQHLA*RQF*GPRIRLWTCKAFRGRRIPYHYNSCRNIWLSCARVYAVWQSH 570
+ NTS*Y VEQ+L QF* IRL T K RG RI YHYNSCRNIWLSCARV+A WQ +
Sbjct: 5 TRNTS*Y*VEQYLTRWQF*ITCIRLRTRKTTRG*RISYHYNSCRNIWLSCARVHAKWQGY 184
Query: 571 REDRCLQFWGSGT*NTQRKATYRCILH*EGIKHCWMVKFSGWREPGEGNRRSEL*RSAHR 750
R+D LQFW GT +T+ KA YR ++H EG++HC M K G E G+R S L R A R
Sbjct: 185 RKDGRLQFWSFGTGDTEWKAAYRRVIHREGVEHCGMAKLLGRGEQRAGDRGSGLRRRADR 364
Query: 751 DLGRSALSRQAVCQLFXXXXXXXXXXXXXXXVGCNYAVP*RLLRFR 888
D GR ALSRQA+ +LF VGCNYAV *R LRFR
Sbjct: 365 DPGRPALSRQAMRELFAGGAADDAQGGTDAGVGCNYAVR*RFLRFR 502
Score = 149 bits (320), Expect(2) = 1e-036
Identities = 74/127 (58%), Positives = 83/127 (65%)
Frame = -2 / -1
Query: 779 WRERAERPRSRCALLHNSDRRFPSPGSRQPENLTIQQCLIPSQ*RMHR*VAFR*VFQVPE 600
WRERA RP SR A N D R P+ S +P +L I QC PS+* R* AF V VP+
Sbjct: 393 WRERAGRPGSRSARRRNPDPRSPALCSPRPRSLAIPQCSTPSR*MTRR*AAFHSVSPVPK 214
Query: 599 PQNCRHRSSRWLCQTAYTLAQDNQMFLQLL**YGILRPLKALQVQSLIRGPQNCRQARCC 420
QNCR S R C A TLAQD+QMFLQLL**Y IL PL L+V+SLI QNC + R C
Sbjct: 213 LQNCRRPSFR*PCHFACTLAQDSQMFLQLL**YEILHPLVVLRVRSLIHVIQNCHRVRYC 34
Query: 419 ST*YHDV 399
ST*YHDV
Sbjct: 33 ST*YHDV 13
Score = 24.4 bits (47), Expect(2) = 1e-036
Identities = 11/14 (78%), Positives = 12/14 (85%)
Frame = -2 / -1
Query: 890 TLNRRSR*GTA*LH 849
TLNRR+R TA*LH
Sbjct: 504 TLNRRNRYRTA*LH 463
>gb|BU980799.1|BU980799 HA21L17r HA Hordeum vulgare subsp. vulgare cDNA clone HA21L17
5-PRIME, mRNA sequence
Length = 504
Score = 362 bits (785), Expect = 2e-099
Identities = 155/166 (93%), Positives = 160/166 (96%)
Frame = +2 / +3
Query: 392 RIIHRDIKSSNILLDGSFEARVSDFGLAKLLEDEESHITTIVAGTFGYLAPEYMQFGRAT 571
R IHRDIKSSNILLDG+FE+RVSDFGLAKLLEDEESHITTIVAGTFGYLAPEYMQ GRAT
Sbjct: 6 RGIHRDIKSSNILLDGNFESRVSDFGLAKLLEDEESHITTIVAGTFGYLAPEYMQSGRAT 185
Query: 572 EKTDVYSFGVLVLEILSGKRPTDASFIEKGLNIVGWLNFLAGENREREIVDLNCEGVHTE 751
EKTDVYSFGVLVLEILSGKRPTDASFIEKGLNIVGWLNFLAGE+REREIVD +C+GV E
Sbjct: 186 EKTDVYSFGVLVLEILSGKRPTDASFIEKGLNIVGWLNFLAGESREREIVDPDCDGVQIE 365
Query: 752 TLDALLSLAKQCVSSLPEERPTMHRVVQMLESDVITPCPSDFYDSE 889
TLDALLSLAKQCVSSLPEERPTMHRVVQMLESDVITPC SDFYDSE
Sbjct: 366 TLDALLSLAKQCVSSLPEERPTMHRVVQMLESDVITPCGSDFYDSE 503
Score = 306 bits (662), Expect = 2e-082
Identities = 137/166 (82%), Positives = 144/166 (86%)
Frame = -1 / -3
Query: 888 SES*KSLGHGVITSDSSICTTLCIVGRSSGKELTHCLARESRASKVSVCTPSQFRSTISL 709
SES*KSL HGVITSDSSICTTLCIVGRSSGKELTHCLARESRAS+VS+CTPSQ STIS
Sbjct: 502 SES*KSLPHGVITSDSSICTTLCIVGRSSGKELTHCLARESRASRVSICTPSQSGSTISR 323
Query: 708 SRFSPARKFNHPTMFNPFSMKDASVGRFPLSISSTRTPKL*TSVFSVALPNCIYSGAR*P 529
S SPA+KF+HPTMFNPFSM DASVGRFPLSISST+TPKL*TSVFSVALP C+YSGAR*P
Sbjct: 322 SLLSPAKKFSHPTMFNPFSMNDASVGRFPLSISSTKTPKL*TSVFSVALPLCMYSGAR*P 143
Query: 528 NVPATIVVIWDXXXXXXXXXXXSDTRASKLPSSKMLLDLISRCIIR 391
NVPATIVVI D SDTR SKLPSSK+LLDLISRCI R
Sbjct: 142 NVPATIVVI*DSSSSSSFASPKSDTRDSKLPSSKILLDLISRCIPR 5
Score = 259 bits (560), Expect = 2e-068
Identities = 110/166 (66%), Positives = 130/166 (78%)
Frame = -3 / -2
Query: 889 L*IVEVARARRNYIRLQHLYHPVHRRPLLRQRADTLLGEREQSVQGLGVHSFTIQIDDFP 710
L*IVE+A ARRNYIRLQHLYHPVHRRPLLRQRA LLGEREQ VQGL +H+ I+I D P
Sbjct: 503 L*IVEIATARRNYIRLQHLYHPVHRRPLLRQRAHALLGEREQGVQGLDLHAVAIRIHDLP 324
Query: 709 LPVLASQKI*PSNNV*SLLNEGCIGRSLSAEYFKYQNPKTVDIGLLGGSAKLHILWRKIT 530
L L Q++*PS+NV LL+E +GR LS +Y +YQN KTVD+ L G A LH+LWRKI
Sbjct: 323 LSALPGQEV*PSHNVQPLLDE*RVGRPLSTQYLQYQNSKTVDVRLFGSPATLHVLWRKIA 144
Query: 529 KCSCNYCSDMGFFVL*KLCKSKV*YAGLKTAVKQDVARLDITMYYS 392
KCSCNYCSDM FF+L* C+S+V*Y K A++ D+ARL+ITMY S
Sbjct: 143 KCSCNYCSDMRFFIL**FCESEV*YT*FKIAIE*DIARLNITMYSS 6
Score = 233 bits (504), Expect = 1e-060
Identities = 109/168 (64%), Positives = 118/168 (70%)
Frame = +3 / +1
Query: 387 RLE*YIVISSRATSCLTAVLRPAYQTLDLQSF*RTKNPISLQ*LQEHLVILRQSICSLAE 566
R E YIVI SRA S A+L YQT D Q++*R KN ISLQ*LQEHL ILRQS C +A
Sbjct: 1 RHEEYIVILSRAISYSMAILNHVYQTSDSQNY*RMKNLISLQ*LQEHLAILRQSTCKVAG 180
Query: 567 PPRRPMSTVLGFWYLKYSAESDLPMHPSLRRD*TLLDG*IFWLARTGRGKSSI*IVKECT 746
P+R STVL FWY +Y ES LP S RR *TL DG* W R G+S I I C
Sbjct: 181 LPKRRTSTVLEFWYWRY*VESGLPTRHSSRRG*TLWDG*TSWPGRAESGRSWIRIATACR 360
Query: 747 PRPWTLCSLSPSSVSALCRRSGRRCTGWYRCWSRM*LRRALATSTIQS 890
RPWT CSLSPS+ ALCRRSGRRCTGWYRCWSRM*LRRA+A STIQS
Sbjct: 361 SRPWTPCSLSPSNA*ALCRRSGRRCTGWYRCWSRM*LRRAVAISTIQS 504
Score = 197 bits (424), Expect = 1e-049
Identities = 93/166 (56%), Positives = 107/166 (64%)
Frame = +1 / +2
Query: 391 SNNTS*YQVEQHLA*RQF*GPRIRLWTCKAFRGRRIPYHYNSCRNIWLSCARVYAVWQSH 570
+ NTS*Y VEQ+L QF* IRL T K RG RI YHYNSCRNIWLSCARV+A WQ +
Sbjct: 5 TRNTS*Y*VEQYLTRWQF*ITCIRLRTRKTTRG*RISYHYNSCRNIWLSCARVHAKWQGY 184
Query: 571 REDRCLQFWGSGT*NTQRKATYRCILH*EGIKHCWMVKFSGWREPGEGNRRSEL*RSAHR 750
R+D LQFW GT +T+ KA YR ++H EG++HC M K G E G+R S L R A R
Sbjct: 185 RKDGRLQFWSFGTGDTEWKAAYRRVIHREGVEHCGMAKLLGRGEQRAGDRGSGLRRRADR 364
Query: 751 DLGRSALSRQAVCQLFXXXXXXXXXXXXXXXVGCNYAVP*RLLRFR 888
D GR ALSRQA+ +LF VGCNYAV *R LRFR
Sbjct: 365 DPGRPALSRQAMRELFAGGAADDAQGGTDAGVGCNYAVR*RFLRFR 502
Score = 149 bits (320), Expect(2) = 1e-036
Identities = 74/127 (58%), Positives = 83/127 (65%)
Frame = -2 / -1
Query: 779 WRERAERPRSRCALLHNSDRRFPSPGSRQPENLTIQQCLIPSQ*RMHR*VAFR*VFQVPE 600
WRERA RP SR A N D R P+ S +P +L I QC PS+* R* AF V VP+
Sbjct: 393 WRERAGRPGSRSARRRNPDPRSPALCSPRPRSLAIPQCSTPSR*MTRR*AAFHSVSPVPK 214
Query: 599 PQNCRHRSSRWLCQTAYTLAQDNQMFLQLL**YGILRPLKALQVQSLIRGPQNCRQARCC 420
QNCR S R C A TLAQD+QMFLQLL**Y IL PL L+V+SLI QNC + R C
Sbjct: 213 LQNCRRPSFR*PCHFACTLAQDSQMFLQLL**YEILHPLVVLRVRSLIHVIQNCHRVRYC 34
Query: 419 ST*YHDV 399
ST*YHDV
Sbjct: 33 ST*YHDV 13
Score = 24.4 bits (47), Expect(2) = 1e-036
Identities = 11/14 (78%), Positives = 12/14 (85%)
Frame = -2 / -1
Query: 890 TLNRRSR*GTA*LH 849
TLNRR+R TA*LH
Sbjct: 504 TLNRRNRYRTA*LH 463
>gb|CA001134.1|CA001134 HS05H22u HS Hordeum vulgare subsp. vulgare cDNA clone HS05H22
3-PRIME, mRNA sequence
Length = 567
Score = 307 bits (664), Expect(2) = 2e-083
Identities = 131/141 (92%), Positives = 136/141 (96%)
Frame = +2 / -1
Query: 470 LAKLLEDEESHITTIVAGTFGYLAPEYMQFGRATEKTDVYSFGVLVLEILSGKRPTDASF 649
LAKLLEDEESHITTIVAGTFGYLAPEYMQ GRATEKTDVYSFGVLVLEILSGKRPTDASF
Sbjct: 567 LAKLLEDEESHITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEILSGKRPTDASF 388
Query: 650 IEKGLNIVGWLNFLAGENREREIVDLNCEGVHTETLDALLSLAKQCVSSLPEERPTMHRV 829
IEKGLNIVGWLNFLAG+++EREIVD +C+GV ETLDALLSLAKQCVSSLPEERPTMHRV
Sbjct: 387 IEKGLNIVGWLNFLAGKSKEREIVDPDCDGVQIETLDALLSLAKQCVSSLPEERPTMHRV 208
Query: 830 VQMLESDVITPCPSDFYDSE* 892
VQMLESDVITPC SDFYDSE*
Sbjct: 207 VQMLESDVITPCGSDFYDSE* 145
Score = 265 bits (573), Expect(2) = 1e-071
Identities = 116/132 (87%), Positives = 122/132 (92%)
Frame = -1 / +2
Query: 891 YSES*KSLGHGVITSDSSICTTLCIVGRSSGKELTHCLARESRASKVSVCTPSQFRSTIS 712
YSES*KSL HGVITSDSSICTTLCIVGRSSGKELTHCLARESRAS+VS+CTPSQ STIS
Sbjct: 146 YSES*KSLPHGVITSDSSICTTLCIVGRSSGKELTHCLARESRASRVSICTPSQSGSTIS 325
Query: 711 LSRFSPARKFNHPTMFNPFSMKDASVGRFPLSISSTRTPKL*TSVFSVALPNCIYSGAR* 532
S PA+KF+HPTMFNPFSM DASVGRFPLSISST+TPKL*TSVFSVALP C+YSGAR*
Sbjct: 326 RSLLFPAKKFSHPTMFNPFSMNDASVGRFPLSISSTKTPKL*TSVFSVALPLCMYSGAR* 505
Query: 531 PNVPATIVVIWD 496
PNVPATIVVI D
Sbjct: 506 PNVPATIVVI*D 541
Score = 225 bits (486), Expect = 3e-058
Identities = 95/141 (67%), Positives = 110/141 (78%)
Frame = -3 / +1
Query: 892 LL*IVEVARARRNYIRLQHLYHPVHRRPLLRQRADTLLGEREQSVQGLGVHSFTIQIDDF 713
LL*IVE+A ARRNYIRLQHLYHPVH RPLLRQRA LLGEREQ VQGL +H+ I+I D
Sbjct: 145 LL*IVEIATARRNYIRLQHLYHPVHCRPLLRQRAHALLGEREQGVQGLDLHAVAIRIHDL 324
Query: 712 PLPVLASQKI*PSNNV*SLLNEGCIGRSLSAEYFKYQNPKTVDIGLLGGSAKLHILWRKI 533
PL L Q++*PS+NV LL+E +GR LS +Y +YQN KTVD+ L G A LH+LWRKI
Sbjct: 325 PLFALPGQEV*PSHNVQPLLDE*RVGRPLSTQYLQYQNSKTVDVRLFGSPATLHVLWRKI 504
Query: 532 TKCSCNYCSDMGFFVL*KLCK 470
KCSCNYCSDM FF+L* C+
Sbjct: 505 AKCSCNYCSDMRFFIL**FCE 567
Score = 206 bits (444), Expect = 2e-052
Identities = 93/141 (65%), Positives = 102/141 (72%)
Frame = +3 / -2
Query: 474 QSF*RTKNPISLQ*LQEHLVILRQSICSLAEPPRRPMSTVLGFWYLKYSAESDLPMHPSL 653
Q++*R KN ISLQ*LQEHL ILRQS C +A P+R STVL FWY +Y ES LP S
Sbjct: 563 QNY*RMKNLISLQ*LQEHLAILRQSTCKVAGLPKRRTSTVLEFWYWRY*VESGLPTRHSS 384
Query: 654 RRD*TLLDG*IFWLARTGRGKSSI*IVKECTPRPWTLCSLSPSSVSALCRRSGRRCTGWY 833
RR *TL DG* W R G+S I I C RPWT CSLSPS+ ALCRRSGR+CTGWY
Sbjct: 383 RRG*TLWDG*TSWPGRAKSGRSWIRIATACRSRPWTPCSLSPSNA*ALCRRSGRQCTGWY 204
Query: 834 RCWSRM*LRRALATSTIQSSL 896
RCWSRM*LRRA+A STIQS L
Sbjct: 203 RCWSRM*LRRAVAISTIQSRL 141
Score = 179 bits (386), Expect = 2e-044
Identities = 81/157 (51%), Positives = 95/157 (60%)
Frame = +1 / -3
Query: 475 KAFRGRRIPYHYNSCRNIWLSCARVYAVWQSHREDRCLQFWGSGT*NTQRKATYRCILH* 654
K RG RI YHYNSCRNIWLSCARV+A WQ +R+D LQFW GT +T+ KA YR ++H
Sbjct: 562 KTTRG*RISYHYNSCRNIWLSCARVHAKWQGYRKDGRLQFWSFGTGDTEWKAAYRRVIHR 383
Query: 655 EGIKHCWMVKFSGWREPGEGNRRSEL*RSAHRDLGRSALSRQAVCQLFXXXXXXXXXXXX 834
EG++HC M K G E G+R S L R A RD GR ALSRQA+ +LF
Sbjct: 382 EGVEHCGMAKLLGREEQRAGDRGSGLRRRADRDPGRPALSRQAMRELFAGGAADNAQGGT 203
Query: 835 XXXVGCNYAVP*RLLRFRVASWTDKPQWCR*FPVEAH 945
VGCNYAV *R LRFRV T + +E H
Sbjct: 202 DAGVGCNYAVR*RFLRFRVGYRTTAAGFSSTIQIETH 92
Score = 113 bits (242), Expect(2) = 5e-026
Identities = 58/103 (56%), Positives = 65/103 (63%)
Frame = -2 / +3
Query: 779 WRERAERPRSRCALLHNSDRRFPSPGSRQPENLTIQQCLIPSQ*RMHR*VAFR*VFQVPE 600
WRERA RP SR A N D R P+ S +P +L I QC PS+* R* AF V VP+
Sbjct: 258 WRERAGRPGSRSARRRNPDPRSPALCSSRPRSLAIPQCSTPSR*MTRR*AAFHSVSPVPK 437
Query: 599 PQNCRHRSSRWLCQTAYTLAQDNQMFLQLL**YGILRPLKALQ 471
QNCR S R C A TLAQD+QMFLQLL**Y IL PL L+
Sbjct: 438 LQNCRRPSFR*PCHFACTLAQDSQMFLQLL**YEILHPLVVLR 566
Score = 25.4 bits (49), Expect(2) = 1e-071
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = -2 / +3
Query: 998 PNKHRGNAFTQYLQRIKECASTG 930
PN +AFT+ + ECASTG
Sbjct: 9 PNPSVMHAFTRICKE*MECASTG 77
Score = 24.4 bits (47), Expect(2) = 5e-026
Identities = 11/14 (78%), Positives = 12/14 (85%)
Frame = -2 / +3
Query: 890 TLNRRSR*GTA*LH 849
TLNRR+R TA*LH
Sbjct: 147 TLNRRNRYRTA*LH 188
Score = 23.1 bits (44), Expect(2) = 2e-083
Identities = 9/17 (52%), Positives = 11/17 (64%)
Frame = +1 / -3
Query: 928 FPVEAHSFILCRYCVNA 978
+PVEAHS + VNA
Sbjct: 79 YPVEAHSIYSLQILVNA 29
>gb|CD663742.1|CD663742 UCRHV18_06ca04_b1 Drought-stressed Dicktoo barley epidermis cDNA
library Hordeum vulgare subsp. vulgare cDNA clone
UCRHV18_06ca04, mRNA sequence
Length = 659
Score = 283 bits (613), Expect(2) = 5e-080
Identities = 121/129 (93%), Positives = 124/129 (96%)
Frame = +2 / -1
Query: 506 TTIVAGTFGYLAPEYMQFGRATEKTDVYSFGVLVLEILSGKRPTDASFIEKGLNIVGWLN 685
TTIVAGTFGYLAPEYMQ GRATEKTDVYSFGVLVLEILSGKRPTDASFIEKGLNIVGWLN
Sbjct: 650 TTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEILSGKRPTDASFIEKGLNIVGWLN 471
Query: 686 FLAGENREREIVDLNCEGVHTETLDALLSLAKQCVSSLPEERPTMHRVVQMLESDVITPC 865
FLAGE+REREIVD +C+GV ETLDALLSLAKQCVSSLPEERPTMHRVVQMLESDVITPC
Sbjct: 470 FLAGESREREIVDPDCDGVQIETLDALLSLAKQCVSSLPEERPTMHRVVQMLESDVITPC 291
Query: 866 PSDFYDSE* 892
SDFYDSE*
Sbjct: 290 GSDFYDSE* 264
Score = 265 bits (573), Expect(2) = 1e-075
Identities = 115/129 (89%), Positives = 121/129 (93%)
Frame = -1 / +1
Query: 891 YSES*KSLGHGVITSDSSICTTLCIVGRSSGKELTHCLARESRASKVSVCTPSQFRSTIS 712
YSES*KSL HGVITSDSSICTTLCIVGRSSGKELTHCLARESRAS+VS+CTPSQ STIS
Sbjct: 265 YSES*KSLPHGVITSDSSICTTLCIVGRSSGKELTHCLARESRASRVSICTPSQSGSTIS 444
Query: 711 LSRFSPARKFNHPTMFNPFSMKDASVGRFPLSISSTRTPKL*TSVFSVALPNCIYSGAR* 532
S SPA+KF+HPTMFNPFSM DASVGRFPLSISST+TPKL*TSVFSVALP C+YSGAR*
Sbjct: 445 RSLLSPAKKFSHPTMFNPFSMNDASVGRFPLSISSTKTPKL*TSVFSVALPLCMYSGAR* 624
Query: 531 PNVPATIVV 505
PNVPATIVV
Sbjct: 625 PNVPATIVV 651
Score = 214 bits (462), Expect(2) = 7e-058
Identities = 89/129 (68%), Positives = 102/129 (79%)
Frame = -3 / +3
Query: 892 LL*IVEVARARRNYIRLQHLYHPVHRRPLLRQRADTLLGEREQSVQGLGVHSFTIQIDDF 713
LL*IVE+A ARRNYIRLQHLYHPVHRRPLLRQRA LLGEREQ VQGL +H+ I+I D
Sbjct: 264 LL*IVEIATARRNYIRLQHLYHPVHRRPLLRQRAHALLGEREQGVQGLDLHAVAIRIHDL 443
Query: 712 PLPVLASQKI*PSNNV*SLLNEGCIGRSLSAEYFKYQNPKTVDIGLLGGSAKLHILWRKI 533
PL L Q++*PS+NV LL+E +GR LS +Y +YQN KTVD+ L G A LH+LWRKI
Sbjct: 444 PLSALPGQEV*PSHNVQPLLDE*RVGRPLSTQYLQYQNSKTVDVRLFGSPATLHVLWRKI 623
Query: 532 TKCSCNYCS 506
KCSCNYCS
Sbjct: 624 AKCSCNYCS 650
Score = 194 bits (419), Expect(2) = 3e-052
Identities = 87/131 (66%), Positives = 94/131 (71%)
Frame = +3 / -2
Query: 504 SLQ*LQEHLVILRQSICSLAEPPRRPMSTVLGFWYLKYSAESDLPMHPSLRRD*TLLDG* 683
+LQ*LQEHL ILRQS C +A P+R STVL FWY +Y ES LP S RR *TL DG*
Sbjct: 652 ALQ*LQEHLAILRQSTCKVAGLPKRRTSTVLEFWYWRY*VESGLPTRHSSRRG*TLWDG* 473
Query: 684 IFWLARTGRGKSSI*IVKECTPRPWTLCSLSPSSVSALCRRSGRRCTGWYRCWSRM*LRR 863
W R G+S I I C RPWT CSLSPS+ ALCRRSGRRCTGWYRCWSRM*LRR
Sbjct: 472 TSWPGRAESGRSWIRIATACRSRPWTPCSLSPSNA*ALCRRSGRRCTGWYRCWSRM*LRR 293
Query: 864 ALATSTIQSSL 896
A+A STIQS L
Sbjct: 292 AVAISTIQSRL 260
Score = 167 bits (359), Expect(2) = 9e-043
Identities = 75/147 (51%), Positives = 89/147 (60%)
Frame = +1 / -3
Query: 505 HYNSCRNIWLSCARVYAVWQSHREDRCLQFWGSGT*NTQRKATYRCILH*EGIKHCWMVK 684
HYNSCRNIWLSCARV+A WQ +R+D LQFW GT +T+ KA YR ++H EG++HC M K
Sbjct: 651 HYNSCRNIWLSCARVHAKWQGYRKDGRLQFWSFGTGDTEWKAAYRRVIHREGVEHCGMAK 472
Query: 685 FSGWREPGEGNRRSEL*RSAHRDLGRSALSRQAVCQLFXXXXXXXXXXXXXXXVGCNYAV 864
G E G+R S L R A RD GR ALSRQA+ +LF VGCNYAV
Sbjct: 471 LLGRGEQRAGDRGSGLRRRADRDPGRPALSRQAMRELFAGGAADDAQGGTDAGVGCNYAV 292
Query: 865 P*RLLRFRVASWTDKPQWCR*FPVEAH 945
*R LRFRV T + +E H
Sbjct: 291 R*RFLRFRVGYRTTAAGFSSTIQIETH 211
Score = 100 bits (213), Expect(2) = 5e-022
Identities = 51/91 (56%), Positives = 57/91 (62%)
Frame = -2 / +2
Query: 779 WRERAERPRSRCALLHNSDRRFPSPGSRQPENLTIQQCLIPSQ*RMHR*VAFR*VFQVPE 600
WRERA RP SR A N D R P+ S +P +L I QC PS+* R* AF V VP+
Sbjct: 377 WRERAGRPGSRSARRRNPDPRSPALCSPRPRSLAIPQCSTPSR*MTRR*AAFHSVSPVPK 556
Query: 599 PQNCRHRSSRWLCQTAYTLAQDNQMFLQLL* 507
QNCR S R C A TLAQD+QMFLQLL*
Sbjct: 557 LQNCRRPSFR*PCHFACTLAQDSQMFLQLL* 649
Score = 39.1 bits (79), Expect(2) = 1e-075
Identities = 17/32 (53%), Positives = 19/32 (59%)
Frame = -2 / +2
Query: 1025 PVEPADWRRPNKHRGNAFTQYLQRIKECASTG 930
PVEPA W PN +AFT + ECASTG
Sbjct: 101 PVEPACWSPPNPSVMHAFTTICKE*MECASTG 196
Score = 35.4 bits (71), Expect(2) = 5e-080
Identities = 18/36 (50%), Positives = 20/36 (55%)
Frame = +1 / -3
Query: 928 FPVEAHSFILCRYCVNALPRCLFGLLQSAGSTGDIF 1035
+PVEAHS + VNA G LQ AGSTG F
Sbjct: 198 YPVEAHSIYSLQIVVNACITEGLGGLQQAGSTGTTF 91
Score = 31.3 bits (62), Expect(2) = 3e-052
Identities = 16/41 (39%), Positives = 20/41 (48%)
Frame = +2 / -1
Query: 902 RTSHSGAASFPWRRIPLFFADIV*MHCRGVCLVSSNRLVQR 1024
R + +S WR IP ++*MH V SNRLV R
Sbjct: 224 RLRRTNHSSTLWRHIPFILCRLL*MHALPRGWVGSNRLVLR 102
Score = 30.4 bits (60), Expect(2) = 7e-058
Identities = 13/31 (41%), Positives = 15/31 (48%)
Frame = -3 / +3
Query: 1024 PLNQPIGGDQTNTAAMHLHNICKE*RNAPPR 932
P NQP+G T MHL K N PP+
Sbjct: 102 P*NQPVGAHPTPR*CMHLQQSAKNKWNVPPQ 194
Score = 27.2 bits (53), Expect(2) = 9e-043
Identities = 13/34 (38%), Positives = 15/34 (44%)
Frame = +3 / -2
Query: 924 LVSRGGAFLYSLQILCKCIAAVFVWSPPIGWFNG 1025
L+ GG F CKC+ V P GWF G
Sbjct: 202 LLPCGGTFHLFFADCCKCMHYRGVGWAPTGWFYG 101
Score = 24.4 bits (47), Expect(2) = 5e-022
Identities = 11/14 (78%), Positives = 12/14 (85%)
Frame = -2 / +2
Query: 890 TLNRRSR*GTA*LH 849
TLNRR+R TA*LH
Sbjct: 266 TLNRRNRYRTA*LH 307
>gb|AV918875.1|AV918875 AV918875 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags22i21 3', mRNA sequence
Length = 629
Score = 232 bits (502), Expect(4) = 8e-076
Identities = 99/107 (92%), Positives = 103/107 (96%)
Frame = +2 / -2
Query: 572 EKTDVYSFGVLVLEILSGKRPTDASFIEKGLNIVGWLNFLAGENREREIVDLNCEGVHTE 751
+KTDVYSFGVLVLEILSGKRPTDASFIEKGLNIVGWLNFLAGE+REREIVD +C+GV E
Sbjct: 541 KKTDVYSFGVLVLEILSGKRPTDASFIEKGLNIVGWLNFLAGESREREIVDPDCDGVQIE 362
Query: 752 TLDALLSLAKQCVSSLPEERPTMHRVVQMLESDVITPCPSDFYDSE* 892
TLDALLSLAKQCVSSLPEERPTMHRVVQMLESDVITPC SDFYDSE*
Sbjct: 361 TLDALLSLAKQCVSSLPEERPTMHRVVQMLESDVITPCGSDFYDSE* 221
Score = 218 bits (471), Expect(3) = 7e-071
Identities = 94/106 (88%), Positives = 99/106 (93%)
Frame = -1 / +3
Query: 891 YSES*KSLGHGVITSDSSICTTLCIVGRSSGKELTHCLARESRASKVSVCTPSQFRSTIS 712
YSES*KSL HGVITSDSSICTTLCIVGRSSGKELTHCLARESRAS+VS+CTPSQ STIS
Sbjct: 222 YSES*KSLPHGVITSDSSICTTLCIVGRSSGKELTHCLARESRASRVSICTPSQSGSTIS 401
Query: 711 LSRFSPARKFNHPTMFNPFSMKDASVGRFPLSISSTRTPKL*TSVF 574
S SPA+KF+HPTMFNPFSM DASVGRFPLSISST+TPKL*TSVF
Sbjct: 402 RSLLSPAKKFSHPTMFNPFSMNDASVGRFPLSISSTKTPKL*TSVF 539
Score = 166 bits (357), Expect(3) = 2e-047
Identities = 72/106 (67%), Positives = 84/106 (79%)
Frame = -3 / +2
Query: 892 LL*IVEVARARRNYIRLQHLYHPVHRRPLLRQRADTLLGEREQSVQGLGVHSFTIQIDDF 713
LL*IVE+A ARRNYIRLQHLYHPVHRRPLLRQRA LLGEREQ VQGL +H+ I+I D
Sbjct: 221 LL*IVEIATARRNYIRLQHLYHPVHRRPLLRQRAHALLGEREQGVQGLDLHAVAIRIHDL 400
Query: 712 PLPVLASQKI*PSNNV*SLLNEGCIGRSLSAEYFKYQNPKTVDIGL 575
PL L Q++*PS+NV LL+E +GR LS +Y +YQN KTVD+ L
Sbjct: 401 PLSALPGQEV*PSHNVQPLLDE*RVGRPLSTQYLQYQNSKTVDVRL 538
Score = 160 bits (345), Expect(3) = 1e-051
Identities = 71/108 (65%), Positives = 76/108 (70%)
Frame = +3 / -3
Query: 573 RRPMSTVLGFWYLKYSAESDLPMHPSLRRD*TLLDG*IFWLARTGRGKSSI*IVKECTPR 752
+R STVL FWY +Y ES LP S RR *TL DG* W R G+S I I C R
Sbjct: 540 KRRTSTVLEFWYWRY*VESGLPTRHSSRRG*TLWDG*TSWPGRAESGRSWIRIATACRSR 361
Query: 753 PWTLCSLSPSSVSALCRRSGRRCTGWYRCWSRM*LRRALATSTIQSSL 896
PWT CSLSPS+ ALCRRSGRRCTGWYRCWSRM*LRRA+A STIQS L
Sbjct: 360 PWTPCSLSPSNA*ALCRRSGRRCTGWYRCWSRM*LRRAVAISTIQSRL 217
Score = 113 bits (242), Expect(3) = 1e-031
Identities = 56/124 (45%), Positives = 68/124 (54%)
Frame = +1 / -1
Query: 574 EDRCLQFWGSGT*NTQRKATYRCILH*EGIKHCWMVKFSGWREPGEGNRRSEL*RSAHRD 753
+D LQFW GT +T+ KA YR ++H EG++HC M K G E G+R S L R A RD
Sbjct: 539 KDGRLQFWSFGTGDTEWKAAYRRVIHREGVEHCGMAKLLGRGEQRAGDRGSGLRRRADRD 360
Query: 754 LGRSALSRQAVCQLFXXXXXXXXXXXXXXXVGCNYAVP*RLLRFRVASWTDKPQWCR*FP 933
GR ALSRQA+ +LF VGCNYAV *R LRFRV T +
Sbjct: 359 PGRPALSRQAMRELFAGGAADDAQGGTDAGVGCNYAVR*RFLRFRVGYRTTAAGFSSTIQ 180
Query: 934 VEAH 945
+E H
Sbjct: 179 IETH 168
Score = 51.9 bits (107), Expect(4) = 8e-076
Identities = 21/22 (95%), Positives = 21/22 (95%)
Frame = +2 / -1
Query: 512 IVAGTFGYLAPEYMQFGRATEK 577
IVAGTFGYLAPEYMQ GRATEK
Sbjct: 602 IVAGTFGYLAPEYMQSGRATEK 537
Score = 51.5 bits (106), Expect(3) = 1e-051
Identities = 18/24 (75%), Positives = 21/24 (87%)
Frame = +1 / -3
Query: 511 NSCRNIWLSCARVYAVWQSHREDR 582
NSCRNIWLSCARV+A WQ +R+ R
Sbjct: 603 NSCRNIWLSCARVHAKWQGYRKRR 532
Score = 48.7 bits (100), Expect(3) = 7e-071
Identities = 20/22 (90%), Positives = 21/22 (95%)
Frame = -1 / +1
Query: 576 FSVALPNCIYSGAR*PNVPATI 511
FSVALP C+YSGAR*PNVPATI
Sbjct: 538 FSVALPLCMYSGAR*PNVPATI 603
Score = 40.0 bits (81), Expect(3) = 7e-071
Identities = 17/32 (53%), Positives = 20/32 (62%)
Frame = -2 / +1
Query: 1025 PVEPADWRRPNKHRGNAFTQYLQRIKECASTG 930
PVEPA W PN +AFT+ + ECASTG
Sbjct: 58 PVEPACWSPPNPSVMHAFTRICKE*MECASTG 153
Score = 35.4 bits (71), Expect(4) = 8e-076
Identities = 18/36 (50%), Positives = 20/36 (55%)
Frame = +1 / -1
Query: 928 FPVEAHSFILCRYCVNALPRCLFGLLQSAGSTGDIF 1035
+PVEAHS + VNA G LQ AGSTG F
Sbjct: 155 YPVEAHSIYSLQILVNACITEGLGGLQQAGSTGTTF 48
Score = 34.5 bits (69), Expect(3) = 1e-031
Identities = 14/23 (60%), Positives = 18/23 (78%)
Frame = +3 / -2
Query: 510 Q*LQEHLVILRQSICSLAEPPRR 578
+*LQEHL ILRQS C +A P++
Sbjct: 604 K*LQEHLAILRQSTCKVAGLPKK 536
Score = 31.8 bits (63), Expect(3) = 2e-047
Identities = 13/17 (76%), Positives = 14/17 (82%)
Frame = -2 / +2
Query: 563 CQTAYTLAQDNQMFLQL 513
C A TLAQD+QMFLQL
Sbjct: 551 CHFACTLAQDSQMFLQL 601
Score = 30.4 bits (60), Expect(3) = 1e-051
Identities = 16/41 (39%), Positives = 19/41 (46%)
Frame = +2 / -2
Query: 902 RTSHSGAASFPWRRIPLFFADIV*MHCRGVCLVSSNRLVQR 1024
R + +S WR IP +*MH V SNRLV R
Sbjct: 181 RLRRTNHSSTLWRHIPFILCRFL*MHALPRGWVGSNRLVLR 59
Score = 30.4 bits (60), Expect(3) = 2e-047
Identities = 13/31 (41%), Positives = 15/31 (48%)
Frame = -3 / +2
Query: 1024 PLNQPIGGDQTNTAAMHLHNICKE*RNAPPR 932
P NQP+G T MHL K N PP+
Sbjct: 59 P*NQPVGAHPTPR*CMHLQESAKNKWNVPPQ 151
Score = 26.7 bits (52), Expect(3) = 1e-031
Identities = 13/34 (38%), Positives = 15/34 (44%)
Frame = +3 / -3
Query: 924 LVSRGGAFLYSLQILCKCIAAVFVWSPPIGWFNG 1025
L+ GG F CKC+ V P GWF G
Sbjct: 159 LLPCGGTFHLFFADSCKCMHYRGVGWAPTGWFYG 58
Score = 22.1 bits (42), Expect(4) = 8e-076
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = +2 / -3
Query: 488 DEESHITT 511
DEESHITT
Sbjct: 627 DEESHITT 604
>dbj|AB109213.1| Hordeum vulgare BRI1 gene for putative brassinosteroid-insensitive 1,
complete cds, cultivar:Haruna Nijo
Length = 3558
Score = 100 bits (212), Expect(4) = 6e-061
Identities = 36/66 (54%), Positives = 55/66 (83%)
Frame = +2 / +1
Query: 311 QLDWDARINIILGAAKGLSYLHHDCSPRIIHRDIKSSNILLDGSFEARVSDFGLAKLLED 490
+L+W AR I +GAA+GL++LHH+C P IIHRD+KSSN+L+D + EARVSDFG+A+++
Sbjct: 2734 RLNWAARRKIAIGAARGLAFLHHNCIPHIIHRDMKSSNVLVDENLEARVSDFGMARMMSV 2913
Query: 491 EESHIT 508
++H++
Sbjct: 2914 VDTHLS 2931
Score = 75.3 bits (158), Expect(4) = 6e-061
Identities = 30/56 (53%), Positives = 42/56 (75%)
Frame = +2 / +1
Query: 515 VAGTFGYLAPEYMQFGRATEKTDVYSFGVLVLEILSGKRPTDASFIEKGLNIVGWL 682
+AGT GY+ PEY Q R T K DVYS+GV++LE+L+GK PTD++ + N+VGW+
Sbjct: 2941 LAGTPGYVPPEYYQSFRCTTKGDVYSYGVVLLELLTGKPPTDSTDFGEDHNLVGWV 3108
Score = 68.0 bits (142), Expect(4) = 6e-061
Identities = 25/53 (47%), Positives = 38/53 (71%)
Frame = +2 / +1
Query: 152 DRFFDRELEILGSVKHRYLVNLRGYCNSPSSKLLIYDYLQGGSLDEVLHEKSE 310
DR F E+E +G +KHR LV L GYC +LL+YD+++ GSL++VLH++ +
Sbjct: 2566 DREFTAEMETIGKIKHRNLVPLLGYCKIGEERLLMYDFMKYGSLEDVLHDRKK 2724
Score = 48.7 bits (100), Expect(4) = 6e-061
Identities = 16/40 (40%), Positives = 29/40 (72%)
Frame = +1 / +1
Query: 13 DILKKLETMDEENIIGAGGFGTVYKLQMDDGNVLALKRIV 132
D+++ +++IG+GGFG VYK Q+ DG V+A+K+++
Sbjct: 2428 DLVEATNGFHNDSLIGSGGFGDVYKAQLKDGRVVAIKKLI 2547
>dbj|AB109215.1| Hordeum vulgare BRI1 gene for putative brassinosteroid-insensitive 1,
complete cds, cultivar:Akashinriki
Length = 3558
Score = 100 bits (212), Expect(4) = 8e-060
Identities = 36/66 (54%), Positives = 55/66 (83%)
Frame = +2 / +1
Query: 311 QLDWDARINIILGAAKGLSYLHHDCSPRIIHRDIKSSNILLDGSFEARVSDFGLAKLLED 490
+L+W AR I +GAA+GL++LHH+C P IIHRD+KSSN+L+D + EARVSDFG+A+++
Sbjct: 2734 RLNWAARRKIAIGAARGLAFLHHNCIPHIIHRDMKSSNVLVDENLEARVSDFGMARMMSV 2913
Query: 491 EESHIT 508
++H++
Sbjct: 2914 VDTHLS 2931
Score = 75.3 bits (158), Expect(4) = 8e-060
Identities = 30/56 (53%), Positives = 42/56 (75%)
Frame = +2 / +1
Query: 515 VAGTFGYLAPEYMQFGRATEKTDVYSFGVLVLEILSGKRPTDASFIEKGLNIVGWL 682
+AGT GY+ PEY Q R T K DVYS+GV++LE+L+GK PTD++ + N+VGW+
Sbjct: 2941 LAGTPGYVPPEYYQSFRCTTKGDVYSYGVVLLELLTGKPPTDSTDFGEDHNLVGWV 3108
Score = 64.3 bits (134), Expect(4) = 8e-060
Identities = 24/53 (45%), Positives = 37/53 (69%)
Frame = +2 / +1
Query: 152 DRFFDRELEILGSVKHRYLVNLRGYCNSPSSKLLIYDYLQGGSLDEVLHEKSE 310
DR F E+E +G +K R LV L GYC +LL+YD+++ GSL++VLH++ +
Sbjct: 2566 DREFTAEMETIGKIKRRNLVPLLGYCKIGEERLLMYDFMKYGSLEDVLHDRKK 2724
Score = 48.7 bits (100), Expect(4) = 8e-060
Identities = 16/40 (40%), Positives = 29/40 (72%)
Frame = +1 / +1
Query: 13 DILKKLETMDEENIIGAGGFGTVYKLQMDDGNVLALKRIV 132
D+++ +++IG+GGFG VYK Q+ DG V+A+K+++
Sbjct: 2428 DLVEATNGFHNDSLIGSGGFGDVYKAQLKDGRVVAIKKLI 2547
>gb|BF260965.2|BF260965 HVSMEf0023G13f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEf0023G13f, mRNA sequence
Length = 755
Score = 107 bits (228), Expect(4) = 2e-058
Identities = 42/64 (65%), Positives = 49/64 (76%)
Frame = +2 / +2
Query: 299 EKSEQLDWDARINIILGAAKGLSYLHHDCSPRIIHRDIKSSNILLDGSFEARVSDFGLAK 478
+K L WD R I + AAKGL YLHHDCSP I+HRD+KS+NILLD FEA V+DFGLAK
Sbjct: 404 KKGGHLHWDTRYKIAVEAAKGLCYLHHDCSPPILHRDVKSNNILLDSDFEAHVADFGLAK 583
Query: 479 LLED 490
L+D
Sbjct: 584 FLQD 595
Score = 66.6 bits (139), Expect(4) = 2e-058
Identities = 23/51 (45%), Positives = 36/51 (70%)
Frame = +2 / +2
Query: 152 DRFFDRELEILGSVKHRYLVNLRGYCNSPSSKLLIYDYLQGGSLDEVLHEK 304
D F E++ LG ++HRY+V L G+C++ + LL+Y+Y+ GSL E+LH K
Sbjct: 254 DHGFSAEIQTLGRIRHRYIVRLLGFCSNNETNLLVYEYMPNGSLGELLHGK 406
Score = 58.3 bits (121), Expect(4) = 2e-058
Identities = 22/51 (43%), Positives = 36/51 (70%)
Frame = +2 / +2
Query: 479 LLEDEESHITTIVAGTFGYLAPEYMQFGRATEKTDVYSFGVLVLEILSGKR 631
L + S + +AG++GY+APEY + EK+DVYS GV++LE+++GK+
Sbjct: 587 LQDSGTSECMSAIAGSYGYIAPEYAYTLKVDEKSDVYSXGVVLLELITGKK 739
Score = 51.0 bits (105), Expect(4) = 2e-058
Identities = 21/41 (51%), Positives = 30/41 (73%)
Frame = +1 / +2
Query: 28 LETMDEENIIGAGGFGTVYKLQMDDGNVLALKRIVKTNEGS 150
L+++ EEN+IG GG GTVYK M DG+ +A+KR+ + GS
Sbjct: 125 LDSLKEENMIGKGGAGTVYKGTMPDGDHVAVKRLSTMSRGS 247
>gb|BF260967.2|BF260967 HVSMEf0023G15f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEf0023G15f, mRNA sequence
Length = 756
Score = 105 bits (224), Expect(4) = 2e-056
Identities = 41/64 (64%), Positives = 49/64 (76%)
Frame = +2 / +3
Query: 299 EKSEQLDWDARINIILGAAKGLSYLHHDCSPRIIHRDIKSSNILLDGSFEARVSDFGLAK 478
+K L WD + I + AAKGL YLHHDCSP I+HRD+KS+NILLD FEA V+DFGLAK
Sbjct: 405 KKGGHLHWDTQYKIAVEAAKGLCYLHHDCSPPILHRDVKSNNILLDSDFEAHVADFGLAK 584
Query: 479 LLED 490
L+D
Sbjct: 585 FLQD 596
Score = 63.8 bits (133), Expect(4) = 2e-056
Identities = 24/52 (46%), Positives = 37/52 (71%)
Frame = +2 / +3
Query: 479 LLEDEESHITTIVAGTFGYLAPEYMQFGRATEKTDVYSFGVLVLEILSGKRP 634
L + S + +AG++GY+APEY + EK+DVYSFG +VLE+++GK+P
Sbjct: 588 LQDSGTSECMSAIAGSYGYIAPEYAYTFKVDEKSDVYSFGGMVLELITGKKP 743
Score = 60.2 bits (125), Expect(4) = 2e-056
Identities = 22/51 (43%), Positives = 34/51 (66%)
Frame = +2 / +3
Query: 152 DRFFDRELEILGSVKHRYLVNLRGYCNSPSSKLLIYDYLQGGSLDEVLHEK 304
D F E++ LG ++HRY+V L G C++ + LL+Y+ + GSL E+LH K
Sbjct: 255 DHGFSAEIQTLGRIQHRYIVRLLGLCSNNKTNLLVYESMPNGSLGELLHGK 407
Score = 47.3 bits (97), Expect(4) = 2e-056
Identities = 20/41 (48%), Positives = 29/41 (70%)
Frame = +1 / +3
Query: 28 LETMDEENIIGAGGFGTVYKLQMDDGNVLALKRIVKTNEGS 150
L+++ EEN+IG GG TVYK M DG+ +A+KR+ + GS
Sbjct: 126 LDSLKEENMIGKGGARTVYKGTMPDGDHVAVKRLSTMSRGS 248
>gb|BG414636.2|BG414636 HVSMEk0003C21f Hordeum vulgare testa/pericarp EST library
HVcDNA0013 (normal) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEk0003C21f, mRNA sequence
Length = 868
Score = 180 bits (387), Expect(3) = 2e-055
Identities = 73/137 (53%), Positives = 96/137 (70%)
Frame = +2 / +1
Query: 314 LDWDARINIILGAAKGLSYLHHDCSPRIIHRDIKSSNILLDGSFEARVSDFGLAKLLEDE 493
L W+AR+ I+LG AK L+YLH P+++HRDIKSSNIL+D F ++SDFGLAK+L
Sbjct: 229 LTWEARMKIVLGIAKALAYLHEAIEPKVVHRDIKSSNILIDEDFNGKLSDFGLAKMLGAG 408
Query: 494 ESHITTIVAGTFGYLAPEYMQFGRATEKTDVYSFGVLVLEILSGKRPTDASFIEKGLNIV 673
+SHITT V GTFGY+APEY G EK+DVYSFGVL+LE ++G+ P D +++V
Sbjct: 409 KSHITTRVMGTFGYVAPEYANTGLLNEKSDVYSFGVLLLEAVTGRDPVDYGRPANEVHLV 588
Query: 674 GWLNFLAGENREREIVD 724
WL + G R E+VD
Sbjct: 589 EWLKMMVGTKRADEVVD 639
Score = 52.8 bits (109), Expect(3) = 2e-055
Identities = 19/54 (35%), Positives = 34/54 (62%)
Frame = +2 / +1
Query: 152 DRFFDRELEILGSVKHRYLVNLRGYCNSPSSKLLIYDYLQGGSLDEVLHEKSEQ 313
++ F E+E +G V+H+ LV L GYC ++L+Y+Y+ G+L++ +H Q
Sbjct: 58 EKEFXVEVEAIGHVRHKNLVRLLGYCVEGIHRMLVYEYVNNGNLEQWIHGAMRQ 219
Score = 22.6 bits (43), Expect(3) = 2e-055
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = +2 / +1
Query: 767 LSLAKQCVSSLPEERPTMHRVVQMLES 847
L +A + V E+RPT VV MLE+
Sbjct: 685 LLVALRGVDPDSEKRPTKGHVVPMLEA 765
>gb|BF258307.2|BF258307 HVSMEf0015G02f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEf0015G02f, mRNA sequence
Length = 582
Score = 127 bits (272), Expect(2) = 2e-053
Identities = 51/65 (78%), Positives = 57/65 (87%)
Frame = +2 / +1
Query: 134 KQMKGLDRFFDRELEILGSVKHRYLVNLRGYCNSPSSKLLIYDYLQGGSLDEVLHEKSEQ 313
K +G D+FFDRELEILGSVKHR VNLRGYCNSP SKL+IYDYL GSLDEVLHEK+EQ
Sbjct: 385 KTNEGRDKFFDRELEILGSVKHRNFVNLRGYCNSPLSKLVIYDYLPSGSLDEVLHEKTEQ 564
Query: 314 LDWDA 328
L+W+A
Sbjct: 565 LEWEA 579
Score = 102 bits (217), Expect(2) = 2e-053
Identities = 43/46 (93%), Positives = 44/46 (95%)
Frame = +1 / +1
Query: 10 KDILKKLETMDEENIIGAGGFGTVYKLQMDDGNVLALKRIVKTNEG 147
KDILKKLETMDEENIIGAGGFGTVYKL MDDG+V ALKRIVKTNEG
Sbjct: 262 KDILKKLETMDEENIIGAGGFGTVYKLAMDDGSVFALKRIVKTNEG 399
Score = 93.2 bits (197), Expect(2) = 1e-034
Identities = 40/59 (67%), Positives = 44/59 (74%)
Frame = +3 / +2
Query: 153 IGSLIENLRYWEVLNIVTWSIFVVIATLLHQNF*YMIIFKVEAWMKCCMKSLNSWIGMH 329
I SLIENLRYWEVL+ V SI V IA L+QN+*YM F+V AWMKC MK LNSW G H
Sbjct: 404 INSLIENLRYWEVLSTVILSISVAIAIPLYQNW*YMTTFQVGAWMKCYMKKLNSWNGKH 580
Score = 93.2 bits (197), Expect(2) = 9e-037
Identities = 38/57 (66%), Positives = 46/57 (80%)
Frame = -3 / -1
Query: 328 CIPIQLFRLFMQHFIQASTLKIIIYQKF**RRVAITTKIDQVTMFNTSQYLKFSIKE 158
C P QLF FM HFIQA T K++IY +F**R +AI T+ID++T+ NTSQYLKFSIKE
Sbjct: 579 CFPFQLFSFFM*HFIQAPTWKVVIYHQF**RGIAIATEIDKITVLNTSQYLKFSIKE 409
Score = 92.7 bits (196), Expect(2) = 5e-031
Identities = 39/57 (68%), Positives = 44/57 (77%)
Frame = -2 / -3
Query: 329 VHPNPTVQTFHAALHPGFHLEDNHISKVLMKESCNNHED*PSNDV*HFPISQVLYQR 159
V P PTVQ FH ALHPG HLE +HIS VL+K +CN+H D* + *HFPISQVLYQR
Sbjct: 580 VLPIPTVQFFHVALHPGSHLEGSHISPVLIKGNCNSHGD*QNYGA*HFPISQVLYQR 410
Score = 81.3 bits (171), Expect(2) = 9e-037
Identities = 31/47 (65%), Positives = 37/47 (78%)
Frame = -1 / -1
Query: 147 PFICFHYSFQSKDIAIIHLQFINSSEASCSNDIFFIHSL*LLEYVFC 7
PFICFHY FQ K+ AIIH +F++S +A CSNDIF IH L* L+ VFC
Sbjct: 399 PFICFHYPFQCKNAAIIHCKFVHSPKAPCSNDIFLIHGL*FLKDVFC 259
Score = 74.4 bits (156), Expect(2) = 1e-034
Identities = 32/48 (66%), Positives = 36/48 (75%)
Frame = +3 / +3
Query: 9 KRHTQEARDYG*RKYHWSRRLRNCL*TANG*WQCPCFEKNSENK*RV* 152
KRH E RD+G* KYHWSR L +C+ T NG*WQ C EK+SENK*R *
Sbjct: 261 KRHP*ETRDHG*GKYHWSRGLWDCVQTCNG*WQRFCIEKDSENK*RA* 404
Score = 62.5 bits (130), Expect(2) = 5e-031
Identities = 26/30 (86%), Positives = 27/30 (90%)
Frame = -2 / -2
Query: 146 PSFVFTILFKARTLPSSICSL*TVPKPPAP 57
PSFVFTILF A+TLPSSI SL TVPKPPAP
Sbjct: 398 PSFVFTILFNAKTLPSSIASLYTVPKPPAP 309
>gb|BE196273.3|BE196273 HVSMEh0091N12f Hordeum vulgare 5-45 DAP spike EST library
HVcDNA0009 (5 to 45 DAP) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEh0091N12f, mRNA sequence
Length = 951
Score = 154 bits (330), Expect(3) = 6e-052
Identities = 59/99 (59%), Positives = 76/99 (76%)
Frame = +2 / +2
Query: 320 WDARINIILGAAKGLSYLHHDCSPRIIHRDIKSSNILLDGSFEARVSDFGLAKLLEDEES 499
WD R+ +++G AK L+YLH P+++HRDIKSSNIL+D F +VSDFGLAK+L ++S
Sbjct: 311 WDNRMKVVIGTAKALAYLHEAIEPKVVHRDIKSSNILIDDEFNGKVSDFGLAKMLGSDKS 490
Query: 500 HITTIVAGTFGYLAPEYMQFGRATEKTDVYSFGVLVLEI 616
HITT V GTFGY+APEY G EK+DVYSFGVL+ E+
Sbjct: 491 HITTRVMGTFGYVAPEYANTGMLNEKSDVYSFGVLLWEL 607
Score = 52.4 bits (108), Expect(3) = 6e-052
Identities = 19/54 (35%), Positives = 35/54 (64%)
Frame = +2 / +2
Query: 152 DRFFDRELEILGSVKHRYLVNLRGYCNSPSSKLLIYDYLQGGSLDEVLHEKSEQ 313
++ F E+E +G V+H+ LV L GYC +++L+Y+++ G+L++ LH Q
Sbjct: 134 EKEFRVEVEAIGHVRHKNLVRLLGYCVEGVNRMLVYEFVNNGNLEQWLHGAMRQ 295
Score = 37.3 bits (75), Expect(3) = 6e-052
Identities = 12/29 (41%), Positives = 23/29 (79%)
Frame = +1 / +2
Query: 43 EENIIGAGGFGTVYKLQMDDGNVLALKRI 129
+EN++G GG+G VY+ ++ +G +A+K+I
Sbjct: 26 KENVLGEGGYGVVYRGRLVNGTEVAIKKI 112
>gb|AW982539.2|AW982539 HVSMEg0003I16f Hordeum vulgare pre-anthesis spike EST library
HVcDNA0008 (white to yellow anther) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEg0003I16f, mRNA sequence
Length = 933
Score = 174 bits (375), Expect(2) = 6e-052
Identities = 67/110 (60%), Positives = 89/110 (80%)
Frame = +2 / +3
Query: 314 LDWDARINIILGAAKGLSYLHHDCSPRIIHRDIKSSNILLDGSFEARVSDFGLAKLLEDE 493
+DW +R+ I LG+AKGL+YLH DC P+IIHRDIK+SNILLD EA+V+DFGLAKL D
Sbjct: 192 MDWPSRLRIALGSAKGLAYLHEDCHPKIIHRDIKASNILLDYRCEAKVADFGLAKLTSDN 371
Query: 494 ESHITTIVAGTFGYLAPEYMQFGRATEKTDVYSFGVLVLEILSGKRPTDA 643
+H++T V GTFGYLAPEY G+ TEK+DV+SFGV++LE+++ +RP +
Sbjct: 372 NTHVSTRVMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELITERRPVSS 521
Score = 50.6 bits (104), Expect(2) = 6e-052
Identities = 18/49 (36%), Positives = 32/49 (65%)
Frame = +2 / +3
Query: 152 DRFFDRELEILGSVKHRYLVNLRGYCNSPSSKLLIYDYLQGGSLDEVLH 298
+R F E++I+ V H++LV L GYC S +LL+Y+++ +L+ +H
Sbjct: 27 EREFQAEVDIISRVHHKHLVTLVGYCISEDKRLLVYEFVPNNTLEFHIH 173
>gb|CA029588.1|CA029588 HZ65K08r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ65K08
5-PRIME, mRNA sequence
Length = 610
Score = 160 bits (344), Expect(3) = 8e-052
Identities = 64/107 (59%), Positives = 82/107 (76%)
Frame = +2 / +1
Query: 314 LDWDARINIILGAAKGLSYLHHDCSPRIIHRDIKSSNILLDGSFEARVSDFGLAKLLEDE 493
L W+AR+ I+LG AK L+YLH P+++HRDIKSSNIL+D F ++SDFGLAK+L
Sbjct: 286 LTWEARMKIVLGIAKALAYLHEAIEPKVVHRDIKSSNILIDEDFNGKLSDFGLAKMLGAG 465
Query: 494 ESHITTIVAGTFGYLAPEYMQFGRATEKTDVYSFGVLVLEILSGKRP 634
+SHITT V GTFGY+APEY G EK+DVYSFGVL+LE ++G+ P
Sbjct: 466 KSHITTRVMGTFGYVAPEYANTGLLNEKSDVYSFGVLLLEAVTGRDP 606
Score = 52.4 bits (108), Expect(3) = 8e-052
Identities = 19/54 (35%), Positives = 34/54 (62%)
Frame = +2 / +1
Query: 152 DRFFDRELEILGSVKHRYLVNLRGYCNSPSSKLLIYDYLQGGSLDEVLHEKSEQ 313
++ F E+E +G V+H+ LV L GYC ++L+Y+Y+ G+L++ +H Q
Sbjct: 115 EKEFRVEVEAIGHVRHKNLVRLLGYCVEGIHRMLVYEYVNNGNLEQWIHGAMRQ 276
Score = 30.4 bits (60), Expect(3) = 8e-052
Identities = 10/26 (38%), Positives = 20/26 (76%)
Frame = +1 / +1
Query: 55 IGAGGFGTVYKLQMDDGNVLALKRIV 132
IG GG+G VY+ ++ +G +A+K+++
Sbjct: 19 IGEGGYGVVYRGRLINGTDVAIKKLL 96
>gb|BE060160.1|BE060160 HVSMEg0011B12f Hordeum vulgare pre-anthesis spike EST library
HVcDNA0008 (white to yellow anther) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEg0011B12f, mRNA sequence
Length = 553
Score = 168 bits (362), Expect(2) = 2e-051
Identities = 66/109 (60%), Positives = 85/109 (77%)
Frame = +2 / +2
Query: 314 LDWDARINIILGAAKGLSYLHHDCSPRIIHRDIKSSNILLDGSFEARVSDFGLAKLLEDE 493
L W+ARI I+LG AK L+YLH P+++HRDIKSSNIL+D F+A+VSDFGLAKLL
Sbjct: 200 LTWEARIKILLGTAKALAYLHEAIEPKVVHRDIKSSNILIDDDFDAKVSDFGLAKLLGAG 379
Query: 494 ESHITTIVAGTFGYLAPEYMQFGRATEKTDVYSFGVLVLEILSGKRPTD 640
+SH+TT V GTFGY+APEY G EK+D+YSFGV++LE ++G+ P D
Sbjct: 380 KSHVTTRVMGTFGYVAPEYANTGLLNEKSDIYSFGVVILEAITGEDPVD 526
Score = 54.7 bits (113), Expect(2) = 2e-051
Identities = 19/49 (38%), Positives = 34/49 (69%)
Frame = +2 / +2
Query: 152 DRFFDRELEILGSVKHRYLVNLRGYCNSPSSKLLIYDYLQGGSLDEVLH 298
++ F E+E +G V+H+ LV L GYC + ++L+Y+Y+ G+L++ LH
Sbjct: 29 EKEFRVEVEAIGHVRHKNLVRLLGYCVEGTQRILVYEYVNNGNLEQWLH 175
>gb|BI960328.1|BI960328 HVSMEn0024D23f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0024D23f, mRNA sequence
Length = 652
Score = 127 bits (272), Expect(3) = 9e-050
Identities = 48/83 (57%), Positives = 63/83 (75%)
Frame = +2 / +3
Query: 302 KSEQLDWDARINIILGAAKGLSYLHHDCSPRIIHRDIKSSNILLDGSFEARVSDFGLAKL 481
K +LDWD R+ I +GAA+GL+YLHHDC+PRI+HRD+KSSNILLD FEA +SDFG+AK
Sbjct: 381 KKVKLDWDTRLRIAVGAAQGLAYLHHDCNPRIVHRDVKSSNILLDEHFEAHLSDFGIAKC 560
Query: 482 LEDEESHITTIVAGTFGYLAPEY 550
+ ++H +T V GY+ P Y
Sbjct: 561 VPAAKTHASTYVLXAIGYIDPGY 629
Score = 68.4 bits (143), Expect(3) = 9e-050
Identities = 27/57 (47%), Positives = 41/57 (71%)
Frame = +2 / +3
Query: 155 RFFDRELEILGSVKHRYLVNLRGYCNSPSSKLLIYDYLQGGSLDEVLHEKSEQLDWD 325
R F+ ELE +GS++HR LV+L G+ SP+ LL YDY++ GSL ++LH S+++ D
Sbjct: 228 REFETELETVGSIRHRNLVSLHGFSLSPNGNLLFYDYMENGSLWDLLHGPSKKVKLD 398
Score = 40.5 bits (82), Expect(3) = 9e-050
Identities = 16/39 (41%), Positives = 24/39 (61%)
Frame = +1 / +3
Query: 13 DILKKLETMDEENIIGAGGFGTVYKLQMDDGNVLALKRI 129
DI++ E + E+ IIG G TVYK + G +A+KR+
Sbjct: 87 DIMRLTENLSEKYIIGYGASSTVYKCVLKSGRAIAVKRL 203
>gb|BG366077.2|BG366077 HVSMEi0005C13f Hordeum vulgare 20 DAP spike EST library HVcDNA0010
(20 DAP) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEi0005C13f, mRNA sequence
Length = 613
Score = 138 bits (297), Expect(3) = 1e-048
Identities = 56/94 (59%), Positives = 70/94 (74%)
Frame = +2 / +1
Query: 314 LDWDARINIILGAAKGLSYLHHDCSPRIIHRDIKSSNILLDGSFEARVSDFGLAKLLEDE 493
L W+ARI I LG AK L+YLH P++IHRDIKSSNIL+D F ++SDFGL+KLL +
Sbjct: 160 LTWEARIKITLGIAKALAYLHEGIEPKVIHRDIKSSNILIDEEFNGKLSDFGLSKLLGEG 339
Query: 494 ESHITTIVAGTFGYLAPEYMQFGRATEKTDVYSF 595
+SHITT V GTFGY+APEY+ G EK+D+ F
Sbjct: 340 KSHITTRVMGTFGYVAPEYINTGLLNEKSDLLQF 441
Score = 52.8 bits (109), Expect(3) = 1e-048
Identities = 20/48 (41%), Positives = 31/48 (64%)
Frame = +2 / +1
Query: 170 ELEILGSVKHRYLVNLRGYCNSPSSKLLIYDYLQGGSLDEVLHEKSEQ 313
E+E +G V+H+ LV L GYC S ++L+Y+Y+ G+L + LH Q
Sbjct: 7 EVEAIGHVRHKNLVRLLGYCVEGSHRMLVYEYISNGNL*QWLHGAMRQ 150
Score = 40.9 bits (83), Expect(3) = 1e-048
Identities = 18/60 (30%), Positives = 33/60 (55%)
Frame = +2 / +2
Query: 572 EKTDVYSFGVLVLEILSGKRPTDASFIEKGLNIVGWLNFLAGENREREIVDLNCEGVHTE 751
++ YSFGVL+LE ++G+ P + S K +++ + G + +E+VD E T+
Sbjct: 419 KRVTCYSFGVLLLEAVTGRDPVNYSRPAKEVHMGECFKLMVGSRKAKEVVDPEMEAKPTK 598
>gb|BU985927.1|BU985927 HF09B02r HF Hordeum vulgare subsp. vulgare cDNA clone HF09B02
5-PRIME, mRNA sequence
Length = 518
Score = 166 bits (356), Expect(2) = 5e-048
Identities = 61/109 (55%), Positives = 88/109 (80%)
Frame = +2 / +2
Query: 314 LDWDARINIILGAAKGLSYLHHDCSPRIIHRDIKSSNILLDGSFEARVSDFGLAKLLEDE 493
LDW R I LG+A+GLSYLH C P+IIHRD+K++NILLD FEA V DFGLAKL++ +
Sbjct: 152 LDWQTRRRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLMDYK 331
Query: 494 ESHITTIVAGTFGYLAPEYMQFGRATEKTDVYSFGVLVLEILSGKRPTD 640
++H+TT V GT G++APEY+ G+++EKTDV+ +G+++LE+++G+R D
Sbjct: 332 DTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFD 478
Score = 46.0 bits (94), Expect(2) = 5e-048
Identities = 16/36 (44%), Positives = 25/36 (69%)
Frame = +2 / +2
Query: 197 HRYLVNLRGYCNSPSSKLLIYDYLQGGSLDEVLHEK 304
HR L+ LRG+C +P+ +LL+Y Y+ GS+ L E+
Sbjct: 26 HRNLLRLRGFCMTPTERLLVYPYMANGSVASRLRER 133
>gb|BG414953.2|BG414953 HVSMEk0004G13f Hordeum vulgare testa/pericarp EST library
HVcDNA0013 (normal) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEk0004G13f, mRNA sequence
Length = 632
Score = 143 bits (307), Expect(3) = 7e-048
Identities = 57/102 (55%), Positives = 76/102 (74%)
Frame = +2 / +3
Query: 314 LDWDARINIILGAAKGLSYLHHDCSPRIIHRDIKSSNILLDGSFEARVSDFGLAKLLEDE 493
+DW I L A+ L+YLH +C PRI+HRD+K SNILLD + A +SDFGLA+LL +
Sbjct: 318 IDWRMLHKIALDVARALAYLHDNCVPRILHRDVKPSNILLDNEYTAYLSDFGLARLLGNS 497
Query: 494 ESHITTIVAGTFGYLAPEYMQFGRATEKTDVYSFGVLVLEIL 619
E+H TT VAGTFGY+APEY R ++K DVYS+GV++LE++
Sbjct: 498 ETHATTGVAGTFGYVAPEYAMTCRVSDKADVYSYGVVLLELI 623
Score = 48.3 bits (99), Expect(3) = 7e-048
Identities = 20/51 (39%), Positives = 32/51 (62%)
Frame = +2 / +3
Query: 161 FDRELEILGSVKHRYLVNLRGYCNSPSSKLLIYDYLQGGSLDEVLHEKSEQ 313
F E++ LG +H LV L GY S S LIY++L GG+L+ + E++++
Sbjct: 162 FQAEVKTLGRCRHDNLVTLIGYHLSDSEMFLIYNFLPGGNLERFIQERTKR 314
Score = 38.2 bits (77), Expect(3) = 7e-048
Identities = 13/38 (34%), Positives = 25/38 (65%)
Frame = +1 / +3
Query: 16 ILKKLETMDEENIIGAGGFGTVYKLQMDDGNVLALKRI 129
+++ + + N IG+GGFG YK ++ G ++A+KR+
Sbjct: 18 VVRAAGSFNASNCIGSGGFGATYKAEIAPGILVAIKRL 131
>gb|BQ763863.1|BQ763863 EBro03_SQ005_I18_R root, 3 week, waterlogged, cv Optic, EBro03
Hordeum vulgare subsp. vulgare cDNA clone
EBro03_SQ005_I18 5', mRNA sequence
Length = 614
Score = 95.9 bits (203), Expect(3) = 9e-048
Identities = 35/58 (60%), Positives = 50/58 (86%)
Frame = +2 / +1
Query: 311 QLDWDARINIILGAAKGLSYLHHDCSPRIIHRDIKSSNILLDGSFEARVSDFGLAKLL 484
+L+W AR I +GAA+GL++LHH+C P IIHRD+KSSN+L+D + EARVSDFG+A+++
Sbjct: 250 RLNWAARRKIAIGAARGLAFLHHNCIPHIIHRDMKSSNVLVDENLEARVSDFGMARMM 423
Score = 68.0 bits (142), Expect(3) = 9e-048
Identities = 25/53 (47%), Positives = 38/53 (71%)
Frame = +2 / +1
Query: 152 DRFFDRELEILGSVKHRYLVNLRGYCNSPSSKLLIYDYLQGGSLDEVLHEKSE 310
DR F E+E +G +KHR LV L GYC +LL+YD+++ GSL++VLH++ +
Sbjct: 82 DREFTAEMETIGKIKHRNLVPLLGYCKIGEERLLMYDFMKYGSLEDVLHDRKK 240
Score = 65.7 bits (137), Expect(3) = 9e-048
Identities = 26/46 (56%), Positives = 35/46 (76%)
Frame = +2 / +2
Query: 515 VAGTFGYLAPEYMQFGRATEKTDVYSFGVLVLEILSGKRPTDASFI 652
+AGT GY+ PEY Q R T K DVYS+GV++LE+L+GK PTD+ +
Sbjct: 458 LAGTPGYVPPEYYQSFRCTTKGDVYSYGVVLLELLTGKPPTDSQIL 595
>gb|BE060551.2|BE060551 HVSMEg0012J19f Hordeum vulgare pre-anthesis spike EST library
HVcDNA0008 (white to yellow anther) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEg0012J19f, mRNA sequence
Length = 687
Score = 109 bits (233), Expect(4) = 3e-047
Identities = 39/68 (57%), Positives = 55/68 (80%)
Frame = +2 / +3
Query: 302 KSEQLDWDARINIILGAAKGLSYLHHDCSPRIIHRDIKSSNILLDGSFEARVSDFGLAKL 481
K ++LDW+ R+ I LGAA+GL+YLHHDCSPRIIHRD+KS NILLD +E ++DFG+ ++
Sbjct: 408 KKKKLDWETRLRIALGAAQGLAYLHHDCSPRIIHRDVKSKNILLDKDYEPHLTDFGIVRV 587
Query: 482 LEDEESHI 505
++SH+
Sbjct: 588 CVFKDSHV 611
Score = 67.5 bits (141), Expect(4) = 3e-047
Identities = 27/47 (57%), Positives = 35/47 (74%)
Frame = +2 / +3
Query: 161 FDRELEILGSVKHRYLVNLRGYCNSPSSKLLIYDYLQGGSLDEVLHE 301
F ELE +GS+KHR LV+L+GY SP LL Y+Y++ GSL +VLHE
Sbjct: 258 FQTELETVGSIKHRNLVSLQGYSLSPVGNLLFYEYMENGSLWDVLHE 398
Score = 35.4 bits (71), Expect(4) = 3e-047
Identities = 14/40 (35%), Positives = 25/40 (62%)
Frame = +1 / +3
Query: 10 KDILKKLETMDEENIIGAGGFGTVYKLQMDDGNVLALKRI 129
+DI++ E + E+ IIG G TVYK + + +A+K++
Sbjct: 108 EDIMRMTENLSEKYIIGYGASSTVYKCVLKNCRPVAIKKL 227
Score = 33.1 bits (66), Expect(4) = 3e-047
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = +2 / +1
Query: 494 ESHITTIVAGTFGYLAPEYMQFGRAT 571
++H +T V GT GY+ PEY + R T
Sbjct: 598 KTHTSTYVMGTIGYIDPEYARTXRLT 675
>gb|BJ462905.1|BJ462905 BJ462905 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags24n16 5', mRNA sequence
Length = 634
Score = 123 bits (264), Expect(2) = 7e-047
Identities = 49/103 (47%), Positives = 72/103 (69%)
Frame = +2 / +3
Query: 170 ELEILGSVKHRYLVNLRGYCNSPSSKLLIYDYLQGGSLDEVLHEKSEQLDWDARINIILG 349
E++ LG+++H +LV L GYC +LL+Y+++ GSL+ L +S L W R+ I LG
Sbjct: 9 EVDFLGNLQHPHLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRRSFPLPWAIRMKIALG 188
Query: 350 AAKGLSYLHHDCSPRIIHRDIKSSNILLDGSFEARVSDFGLAK 478
AAKGL++LH + +I+RD K+SNILLD + A++SDFGLAK
Sbjct: 189 AAKGLAFLHEEAERPVIYRDFKTSNILLDAEYNAKLSDFGLAK 317
Score = 84.5 bits (178), Expect(2) = 7e-047
Identities = 34/74 (45%), Positives = 49/74 (66%)
Frame = +2 / +3
Query: 485 EDEESHITTIVAGTFGYLAPEYMQFGRATEKTDVYSFGVLVLEILSGKRPTDASFIEKGL 664
E +++H++T V GT+GY APEY+ G T K+DVYSFGV++LE++SG+R D +
Sbjct: 327 EGDKTHVSTRVMGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEMMSGRRSMDKNRPNGEH 506
Query: 665 NIVGWLNFLAGENR 706
N+V W GE R
Sbjct: 507 NLVEWARPYLGERR 548
>gb|BU972150.1|BU972150 HB20M05r BC Hordeum vulgare subsp. vulgare cDNA clone HB20M05
5-PRIME, mRNA sequence
Length = 617
Score = 173 bits (373), Expect(2) = 1e-046
Identities = 70/123 (56%), Positives = 91/123 (73%)
Frame = +2 / +3
Query: 314 LDWDARINIILGAAKGLSYLHHDCSPRIIHRDIKSSNILLDGSFEARVSDFGLAKLLEDE 493
L WD R+ IILG+AKGL YLH P+++HRD+KSSNILLD + A++SDFGLAKLL E
Sbjct: 123 LTWDIRMKIILGSAKGLMYLHEGLEPKVVHRDVKSSNILLDKHWNAKLSDFGLAKLLGSE 302
Query: 494 ESHITTIVAGTFGYLAPEYMQFGRATEKTDVYSFGVLVLEILSGKRPTDASFIEKGLNIV 673
S++TT V GTFGY+APEY G E +DVYSFG+L++EI+SG+ P D + +N+V
Sbjct: 303 RSYVTTRVMGTFGYVAPEYAGTGMLNETSDVYSFGILIMEIISGRVPVDYNRPPGEVNLV 482
Query: 674 GWL 682
WL
Sbjct: 483 EWL 491
Score = 33.6 bits (67), Expect(2) = 1e-046
Identities = 9/28 (32%), Positives = 20/28 (71%)
Frame = +2 / +3
Query: 215 LRGYCNSPSSKLLIYDYLQGGSLDEVLH 298
L GYC + ++L+Y+++ G+L++ +H
Sbjct: 15 LLGYCAEGNQRMLVYEFVNNGTLEQWIH 98
>gb|BQ760957.1|BQ760957 EBro03_SQ003_P10_R root, 3 week, waterlogged, cv Optic, EBro03
Hordeum vulgare subsp. vulgare cDNA clone
EBro03_SQ003_P10 5', mRNA sequence
Length = 592
Score = 154 bits (330), Expect(2) = 1e-046
Identities = 61/110 (55%), Positives = 81/110 (73%)
Frame = +2 / +1
Query: 299 EKSEQLDWDARINIILGAAKGLSYLHHDCSPRIIHRDIKSSNILLDGSFEARVSDFGLAK 478
++ L W R I L A+GLSYLH + ++HRDIK+SNILLD + ++SDFGLAK
Sbjct: 190 KRGSSLYWPTRFEICLSVARGLSYLHEESIIPVVHRDIKASNILLDANLNPKISDFGLAK 369
Query: 479 LLEDEESHITTIVAGTFGYLAPEYMQFGRATEKTDVYSFGVLVLEILSGK 628
L +D+++H++T VAGTFGYLAPEY G TEK DV++FGV+VLE LSG+
Sbjct: 370 LYDDQKTHVSTKVAGTFGYLAPEYAMRGHMTEKIDVFAFGVVVLETLSGR 519
Score = 53.3 bits (110), Expect(2) = 1e-046
Identities = 23/50 (46%), Positives = 30/50 (60%)
Frame = +2 / +1
Query: 155 RFFDRELEILGSVKHRYLVNLRGYCNSPSSKLLIYDYLQGGSLDEVLHEK 304
R F E+E + V+HR LV L G C + LL+Y+YL+ GSLD L K
Sbjct: 43 REFATEIETISRVQHRNLVKLYGCCLEGNKPLLVYEYLENGSLDHALFGK 192
>gb|AV916932.1|AV916932 AV916932 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags20c08 5', mRNA sequence
Length = 446
Score = 186 bits (400), Expect = 3e-046
Identities = 72/122 (59%), Positives = 95/122 (77%)
Frame = +2 / +2
Query: 314 LDWDARINIILGAAKGLSYLHHDCSPRIIHRDIKSSNILLDGSFEARVSDFGLAKLLEDE 493
L+W R+ I LGAAKGL+Y+H DC P+IIHRDIKSSNILLD FEA+V+DFGLAK D
Sbjct: 56 LEWPIRLRIALGAAKGLAYIHEDCHPKIIHRDIKSSNILLDFKFEAKVADFGLAKFTSDN 235
Query: 494 ESHITTIVAGTFGYLAPEYMQFGRATEKTDVYSFGVLVLEILSGKRPTDASFIEKGLNIV 673
+H++T V GTFGYLAPEY G+ TEK+DV+SFGV++LE+++G+RP D++ ++V
Sbjct: 236 NTHVSTRVMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELITGRRPVDSTQTYMDDSLV 415
Query: 674 GW 679
W
Sbjct: 416 DW 421
>gb|AV917322.1|AV917322 AV917322 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags18g23 5', mRNA sequence
Length = 578
Score = 186 bits (400), Expect = 3e-046
Identities = 72/122 (59%), Positives = 95/122 (77%)
Frame = +2 / +3
Query: 314 LDWDARINIILGAAKGLSYLHHDCSPRIIHRDIKSSNILLDGSFEARVSDFGLAKLLEDE 493
L+W R+ I LGAAKGL+Y+H DC P+IIHRDIKSSNILLD FEA+V+DFGLAK D
Sbjct: 3 LEWPIRLRIALGAAKGLAYIHEDCHPKIIHRDIKSSNILLDFKFEAKVADFGLAKFTSDN 182
Query: 494 ESHITTIVAGTFGYLAPEYMQFGRATEKTDVYSFGVLVLEILSGKRPTDASFIEKGLNIV 673
+H++T V GTFGYLAPEY G+ TEK+DV+SFGV++LE+++G+RP D++ ++V
Sbjct: 183 NTHVSTRVMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELITGRRPVDSTQTYMDDSLV 362
Query: 674 GW 679
W
Sbjct: 363 DW 368
>gb|BG300180.2|BG300180 HVSMEb0010M14f Hordeum vulgare seedling shoot EST library
HVcDNA0002 (Dehydration stress) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEb0010M14f, mRNA sequence
Length = 514
Score = 107 bits (229), Expect(3) = 7e-046
Identities = 42/61 (68%), Positives = 49/61 (80%)
Frame = +2 / +1
Query: 302 KSEQLDWDARINIILGAAKGLSYLHHDCSPRIIHRDIKSSNILLDGSFEARVSDFGLAKL 481
K L WDAR + L AA+GL YLHHDC+PRIIHRD+KS+NILLD +FEA V+DFGLAK
Sbjct: 127 KGGHLGWDARARVALEAARGLCYLHHDCAPRIIHRDVKSNNILLDSAFEAHVADFGLAKF 306
Query: 482 L 484
L
Sbjct: 307 L 309
Score = 66.6 bits (139), Expect(3) = 7e-046
Identities = 26/60 (43%), Positives = 39/60 (65%)
Frame = +2 / +1
Query: 497 SHITTIVAGTFGYLAPEYMQFGRATEKTDVYSFGVLVLEILSGKRPTDASFIEKGLNIVG 676
S + +AG++GY+APEY R EK+DVYSFGV++LE+++G+RP G +G
Sbjct: 328 SECMSAIAGSYGYIAPEYAYTLRVDEKSDVYSFGVVLLELITGRRPVGGFGXRXGXXALG 507
Score = 48.7 bits (100), Expect(3) = 7e-046
Identities = 17/39 (43%), Positives = 28/39 (71%)
Frame = +2 / +1
Query: 182 LGSVKHRYLVNLRGYCNSPSSKLLIYDYLQGGSLDEVLH 298
LG ++HR +V L G+ ++ + LL+Y+Y+ GSL E+LH
Sbjct: 4 LGRIRHRNIVRLLGFVSNRETNLLLYEYMPNGSLGEMLH 120
>gb|BQ465888.1|BQ465888 HU04P13r HU Hordeum vulgare subsp. vulgare cDNA clone HU04P13
5-PRIME, mRNA sequence
Length = 580
Score = 135 bits (290), Expect(3) = 1e-045
Identities = 49/92 (53%), Positives = 73/92 (79%)
Frame = +2 / +2
Query: 314 LDWDARINIILGAAKGLSYLHHDCSPRIIHRDIKSSNILLDGSFEARVSDFGLAKLLEDE 493
LDW+AR + +G A+GL YLH C+P+IIHRD+K++N+LLD FE V DFGLAKL++ +
Sbjct: 305 LDWNARKRVAIGTARGLEYLHEHCNPKIIHRDVKAANVLLDEGFEPVVGDFGLAKLVDVQ 484
Query: 494 ESHITTIVAGTFGYLAPEYMQFGRATEKTDVY 589
++ +TT V GT G++APEY+ G+++E+TDV+
Sbjct: 485 KTSVTTQVRGTMGHIAPEYLSTGKSSERTDVF 580
Score = 43.7 bits (89), Expect(3) = 1e-045
Identities = 15/33 (45%), Positives = 23/33 (69%)
Frame = +1 / +2
Query: 31 ETMDEENIIGAGGFGTVYKLQMDDGNVLALKRI 129
+ E+N++G GGFG VYK + DG +A+KR+
Sbjct: 11 DNFSEKNVLGQGGFGKVYKGSLPDGTKIAVKRL 109
Score = 42.8 bits (87), Expect(3) = 1e-045
Identities = 18/52 (34%), Positives = 31/52 (59%)
Frame = +2 / +2
Query: 146 GLDRFFDRELEILGSVKHRYLVNLRGYCNSPSSKLLIYDYLQGGSLDEVLHE 301
G + F RE+E++ HR L+ L G+C + + +LL+Y ++Q S+ L E
Sbjct: 128 GGEAAFLREVELISVAVHRNLLRLIGFCTTQTERLLVYPFMQNLSVAYRLRE 283
>gb|BQ462615.1|BQ462615 HI01H17T HI Hordeum vulgare subsp. vulgare cDNA clone HI01H17
5-PRIME, mRNA sequence
Length = 571
Score = 99.6 bits (211), Expect(3) = 3e-045
Identities = 40/62 (64%), Positives = 46/62 (74%)
Frame = +2 / +1
Query: 299 EKSEQLDWDARINIILGAAKGLSYLHHDCSPRIIHRDIKSSNILLDGSFEARVSDFGLAK 478
+K L W R I + AAKGL YLHHDCSP I+HRD+KS+NILLD FEA V+DFGLAK
Sbjct: 193 KKGGHLQWATRYKIAVEAAKGLCYLHHDCSPPILHRDVKSNNILLDTDFEAHVADFGLAK 372
Query: 479 LL 484
L
Sbjct: 373 FL 378
Score = 62.5 bits (130), Expect(3) = 3e-045
Identities = 22/46 (47%), Positives = 36/46 (78%)
Frame = +2 / +1
Query: 497 SHITTIVAGTFGYLAPEYMQFGRATEKTDVYSFGVLVLEILSGKRP 634
S + +AG++GY+APEY + EK+DVYSFGV++LE+++G++P
Sbjct: 397 SECMSAIAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELVTGRKP 534
Score = 59.3 bits (123), Expect(3) = 3e-045
Identities = 22/51 (43%), Positives = 34/51 (66%)
Frame = +2 / +1
Query: 152 DRFFDRELEILGSVKHRYLVNLRGYCNSPSSKLLIYDYLQGGSLDEVLHEK 304
D F E++ LG ++HR++V L G+ + + LL+Y+Y+ GSL EVLH K
Sbjct: 43 DYGFSAEIQTLGRIRHRHIVRLLGFAANRETNLLVYEYMPNGSLGEVLHGK 195
>gb|BQ470048.1|BQ470048 HX01J23T HX Hordeum vulgare subsp. vulgare cDNA clone HX01J23
5-PRIME, mRNA sequence
Length = 567
Score = 180 bits (388), Expect = 1e-044
Identities = 71/137 (51%), Positives = 99/137 (72%)
Frame = +2 / +2
Query: 314 LDWDARINIILGAAKGLSYLHHDCSPRIIHRDIKSSNILLDGSFEARVSDFGLAKLLEDE 493
L WDAR++I+LG AKG++YLH P+++HRDIKSSNILLD + ++VSDFGLAKLL +
Sbjct: 2 LSWDARMDIVLGTAKGITYLHEGLEPKVVHRDIKSSNILLDKRWNSKVSDFGLAKLLGSD 181
Query: 494 ESHITTIVAGTFGYLAPEYMQFGRATEKTDVYSFGVLVLEILSGKRPTDASFIEKGLNIV 673
+++TT V GTFGY+APEY G E++DVYSFGVL++EI+SG+ P D + +N+V
Sbjct: 182 SNYVTTRVMGTFGYVAPEYASTGMLNERSDVYSFGVLIMEIISGRCPVDYARPPAEVNLV 361
Query: 674 GWLNFLAGENREREIVD 724
WL +A ++D
Sbjct: 362 EWLKKMASNRDYEAVLD 412
>gb|BI777999.2|BI777999 EBro07_SQ001_M06_R root, 3 week, reduced light, cv Optic, EBro07
Hordeum vulgare subsp. vulgare cDNA clone
EBro07_SQ001_M06 5', mRNA sequence
Length = 450
Score = 163 bits (350), Expect(2) = 1e-044
Identities = 65/109 (59%), Positives = 83/109 (76%)
Frame = +2 / +1
Query: 314 LDWDARINIILGAAKGLSYLHHDCSPRIIHRDIKSSNILLDGSFEARVSDFGLAKLLEDE 493
L W+AR+ I+LG AK L+YLH P+++HRDIKSSNIL+D F ++SDFGLAK+L
Sbjct: 118 LTWEARMKIVLGIAKALAYLHEAIEPKVVHRDIKSSNILIDEDFNGKLSDFGLAKMLGAG 297
Query: 494 ESHITTIVAGTFGYLAPEYMQFGRATEKTDVYSFGVLVLEILSGKRPTD 640
+SHITT V GTFGY+APEY G EK+DVYSFGVL+LE ++G+ P D
Sbjct: 298 KSHITTRVMGTFGYVAPEYANTGLLNEKSDVYSFGVLLLEAVTGRDPVD 444
Score = 37.3 bits (75), Expect(2) = 1e-044
Identities = 13/36 (36%), Positives = 22/36 (61%)
Frame = +2 / +1
Query: 206 LVNLRGYCNSPSSKLLIYDYLQGGSLDEVLHEKSEQ 313
LV L GYC ++L+Y+Y+ G+L++ +H Q
Sbjct: 1 LVRLLGYCVEGIHRMLVYEYVNNGNLEQWIHGAMRQ 108
>gb|BE558923.1|BE558923 HV_CEb0020M17f Hordeum vulgare seedling green leaf EST library
HVcDNA0005 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEb0020M17f, mRNA sequence
Length = 821
Score = 160 bits (344), Expect(2) = 2e-044
Identities = 66/109 (60%), Positives = 83/109 (76%)
Frame = +2 / +3
Query: 314 LDWDARINIILGAAKGLSYLHHDCSPRIIHRDIKSSNILLDGSFEARVSDFGLAKLLEDE 493
LDW R I LG A+GL+Y+H + + RI+HRDIK+SNILLD +A++SDFGLAKL ED
Sbjct: 222 LDWPTRRKICLGIARGLAYMHEESAIRIVHRDIKASNILLDKDLDAKISDFGLAKLNEDG 401
Query: 494 ESHITTIVAGTFGYLAPEYMQFGRATEKTDVYSFGVLVLEILSGKRPTD 640
+HI+T VAGT GY+APEY G T+K DVYSFGV+ LEI+SGK T+
Sbjct: 402 HTHISTKVAGTIGYMAPEYAMRGYLTDKADVYSFGVVALEIVSGKSNTN 548
Score = 39.6 bits (80), Expect(2) = 2e-044
Identities = 17/58 (29%), Positives = 31/58 (53%)
Frame = +2 / +3
Query: 152 DRFFDRELEILGSVKHRYLVNLRGYCNSPSSKLLIYDYLQGGSLDEVLHEKSEQLDWD 325
+R F E+ ++ +++H LV L G C + LL+Y+Y++ L L + +L D
Sbjct: 54 NREFVNEIGMISALQHPNLVRLYGCCTEGNQLLLVYEYMENNCLARALFVEEYRLALD 227
>gb|CA018896.1|CA018896 HV09P14r HV Hordeum vulgare subsp. vulgare cDNA clone HV09P14
5-PRIME, mRNA sequence
Length = 597
Score = 132 bits (282), Expect(2) = 3e-044
Identities = 50/83 (60%), Positives = 65/83 (78%)
Frame = +2 / +2
Query: 302 KSEQLDWDARINIILGAAKGLSYLHHDCSPRIIHRDIKSSNILLDGSFEARVSDFGLAKL 481
K ++LDW+ R+ I LGAA+GL+YLHHDCSPRIIHRD+KS NILLD +E ++DFG+AK
Sbjct: 341 KKKKLDWETRLRIALGAAQGLAYLHHDCSPRIIHRDVKSKNILLDKDYEPHLTDFGIAKS 520
Query: 482 LEDEESHITTIVAGTFGYLAPEY 550
L ++H +T V GT GY+ PEY
Sbjct: 521 LCVSKTHTSTYVMGTIGYIDPEY 589
Score = 67.5 bits (141), Expect(2) = 3e-044
Identities = 27/47 (57%), Positives = 35/47 (74%)
Frame = +2 / +2
Query: 161 FDRELEILGSVKHRYLVNLRGYCNSPSSKLLIYDYLQGGSLDEVLHE 301
F ELE +GS+KHR LV+L+GY SP LL Y+Y++ GSL +VLHE
Sbjct: 191 FQTELETVGSIKHRNLVSLQGYSLSPVGNLLFYEYMENGSLWDVLHE 331
>gb|BG415671.2|BG415671 HVSMEk0007G10f Hordeum vulgare testa/pericarp EST library
HVcDNA0013 (normal) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEk0007G10f, mRNA sequence
Length = 660
Score = 105 bits (224), Expect(4) = 4e-044
Identities = 40/70 (57%), Positives = 51/70 (72%)
Frame = +2 / +3
Query: 293 LHEKSEQLDWDARINIILGAAKGLSYLHHDCSPRIIHRDIKSSNILLDGSFEARVSDFGL 472
L ++ LDWD R I +GAA+GLSYLHHDC P I+HRD+K +NILLD +EA ++DFGL
Sbjct: 177 LLSENRSLDWDTRYKIAVGAAQGLSYLHHDCVPAILHRDVKCNNILLDSKYEAYLADFGL 356
Query: 473 AKLLEDEESH 502
AKL+ H
Sbjct: 357 AKLMNSPNYH 386
Score = 62.0 bits (129), Expect(4) = 4e-044
Identities = 23/47 (48%), Positives = 35/47 (74%)
Frame = +2 / +3
Query: 161 FDRELEILGSVKHRYLVNLRGYCNSPSSKLLIYDYLQGGSLDEVLHE 301
F E++ILG ++HR +V L GYC++ S KLL+Y+Y+ G+L E+L E
Sbjct: 48 FAAEIQILGHIRHRNIVKLLGYCSNKSVKLLLYNYVPNGNLQELLSE 188
Score = 36.3 bits (73), Expect(4) = 4e-044
Identities = 14/18 (77%), Positives = 17/18 (94%)
Frame = +2 / +1
Query: 572 EKTDVYSFGVLVLEILSG 625
EK+DVYS+GV+ LEILSG
Sbjct: 460 EKSDVYSYGVVALEILSG 513
Score = 31.3 bits (62), Expect(4) = 4e-044
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = +2 / +3
Query: 500 HITTIVAGTFGYLAPEYMQFGRATEK 577
H + +AG++GY+APEY T K
Sbjct: 387 HAMSRIAGSYGYIAPEYGYTSNITRK 464
>gb|BU988481.1|BU988481 HF17M10r HF Hordeum vulgare subsp. vulgare cDNA clone HF17M10
5-PRIME, mRNA sequence
Length = 480
Score = 158 bits (340), Expect(2) = 4e-044
Identities = 62/104 (59%), Positives = 81/104 (77%)
Frame = +2 / +3
Query: 299 EKSEQLDWDARINIILGAAKGLSYLHHDCSPRIIHRDIKSSNILLDGSFEARVSDFGLAK 478
+ S LDW+ R I LGAA+GLSYLHHDC PRIIHRDIKS+NILLD +FEA V DFGLAK
Sbjct: 168 QSSSSLDWEIRFTIALGAAEGLSYLHHDCKPRIIHRDIKSNNILLDENFEAHVGDFGLAK 347
Query: 479 LLEDEESHITTIVAGTFGYLAPEYMQFGRATEKTDVYSFGVLVL 610
+++ S + +AG++GY+APEY + TEK+D+YS+GV++L
Sbjct: 348 VIDMPISKSMSAIAGSYGYIAPEYAYTMKVTEKSDIYSYGVVLL 479
Score = 40.5 bits (82), Expect(2) = 4e-044
Identities = 15/45 (33%), Positives = 25/45 (55%)
Frame = +2 / +2
Query: 143 KGLDRFFDRELEILGSVKHRYLVNLRGYCNSPSSKLLIYDYLQGG 277
+ D F E+ LG ++HR +V L G+ + LL+Y+Y+ G
Sbjct: 8 RNTDNSFRAEIMTLGKIRHRNIVKLYGFIYHQGANLLLYEYMPRG 142
>gb|BG367446.2|BG367446 HVSMEi0012E18f Hordeum vulgare 20 DAP spike EST library HVcDNA0010
(20 DAP) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEi0012E18f, mRNA sequence
Length = 689
Score = 162 bits (349), Expect(2) = 7e-044
Identities = 65/124 (52%), Positives = 86/124 (69%)
Frame = +2 / +2
Query: 365 SYLHHDCSPRIIHRDIKSSNILLDGSFEARVSDFGLAKLLEDEESHITTIVAGTFGYLAP 544
+YLH P+++HRDIKSSNIL+D F+A+VSDFGLAKLL +SH+TT V GTFGY+AP
Sbjct: 2 AYLHEAIEPKVVHRDIKSSNILIDDDFDAKVSDFGLAKLLGAGKSHVTTRVMGTFGYVAP 181
Query: 545 EYMQFGRATEKTDVYSFGVLVLEILSGKRPTDASFIEKGLNIVGWLNFLAGENREREIVD 724
EY G EK+D+YSFGV++LE ++G+ P D K +N+V WL + R E+VD
Sbjct: 182 EYANTGLLNEKSDIYSFGVVILEAITGRDPVDYGRPTKEVNLVDWLKMMVAIRRSEEVVD 361
Query: 725 LNCE 736
E
Sbjct: 362 PTIE 373
Score = 35.4 bits (71), Expect(2) = 7e-044
Identities = 17/35 (48%), Positives = 21/35 (60%)
Frame = +2 / +2
Query: 746 TETLDALLSLAKQCVSSLPEERPTMHRVVQMLESD 850
T L L A +CV E+RP M +VV+MLESD
Sbjct: 386 TRVLKRALLTALRCVDPDSEKRPKMGQVVRMLESD 490
>gb|AL504994.1|AL504994 AL504994 Hordeum vulgare Barke roots Hordeum vulgare subsp. vulgare
cDNA clone HW07A22V 5', mRNA sequence
Length = 700
Score = 153 bits (328), Expect(2) = 9e-044
Identities = 62/112 (55%), Positives = 84/112 (75%)
Frame = +2 / +1
Query: 305 SEQLDWDARINIILGAAKGLSYLHHDCSPRIIHRDIKSSNILLDGSFEARVSDFGLAKLL 484
S Q +W AR+ I +G A+GL++LH + P IIHRDIK+SNILLD ++SDFGLA+LL
Sbjct: 199 SIQFNWRARVKIAVGVARGLAFLHEEIRPHIIHRDIKASNILLDKDLTPKISDFGLARLL 378
Query: 485 EDEESHITTIVAGTFGYLAPEYMQFGRATEKTDVYSFGVLVLEILSGKRPTD 640
+H++T VAGT GYLAPEY G+ T+K+D+YS+GVL+LEI SG+ T+
Sbjct: 379 PANATHVSTRVAGTLGYLAPEYAIRGQVTKKSDIYSYGVLLLEIXSGRCNTN 534
Score = 44.6 bits (91), Expect(2) = 9e-044
Identities = 19/47 (40%), Positives = 27/47 (57%)
Frame = +2 / +1
Query: 155 RFFDRELEILGSVKHRYLVNLRGYCNSPSSKLLIYDYLQGGSLDEVL 295
R F EL + +KH LV L G C S ++L+Y+YL+ SL + L
Sbjct: 40 REFLTELTAISDIKHENLVTLVGCCAEGSHRILVYNYLEKNSLSQTL 180
>gb|BE214948.1|BE214948 HV_CEb0005F01f Hordeum vulgare seedling green leaf EST library
HVcDNA0005 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEb0005F01f, mRNA sequence
Length = 938
Score = 90.4 bits (191), Expect(4) = 1e-043
Identities = 33/71 (46%), Positives = 49/71 (69%)
Frame = +2 / +3
Query: 299 EKSEQLDWDARINIILGAAKGLSYLHHDCSPRIIHRDIKSSNILLDGSFEARVSDFGLAK 478
EK QLDW+ R II G A+G+ YLH D +++HRD+K+SN+LLD + ++SDFGLAK
Sbjct: 267 EKRRQLDWETRFKIINGVARGIQYLHEDSQLKVVHRDLKASNVLLDMNMNPKISDFGLAK 446
Query: 479 LLEDEESHITT 511
+ +++ T
Sbjct: 447 IFGRDQTQGVT 479
Score = 62.5 bits (130), Expect(4) = 1e-043
Identities = 23/47 (48%), Positives = 35/47 (74%)
Frame = +2 / +3
Query: 488 DEESHITTIVAGTFGYLAPEYMQFGRATEKTDVYSFGVLVLEILSGK 628
D+ +T V GT+GY+APEY+ G+ T K+D ++FGVLVL +++GK
Sbjct: 459 DQTQGVTNRVIGTYGYMAPEYVMRGKYTVKSDAFNFGVLVLGVVTGK 599
Score = 45.1 bits (92), Expect(4) = 1e-043
Identities = 18/52 (34%), Positives = 31/52 (59%)
Frame = +2 / +3
Query: 170 ELEILGSVKHRYLVNLRGYCNSPSSKLLIYDYLQGGSLDEVLHEKSEQLDWD 325
EL ++ +KH+ LV L G C +LLIY+++ SLD +L ++ ++ D
Sbjct: 132 ELALVAKLKHKNLVRLVGVCLEQQERLLIYEFVPNRSLDLILFDEEKRRQLD 287
Score = 35.4 bits (71), Expect(4) = 1e-043
Identities = 14/29 (48%), Positives = 21/29 (72%)
Frame = +1 / +3
Query: 55 IGAGGFGTVYKLQMDDGNVLALKRIVKTN 141
+G GGFG VYK + G+ +A+KR+ KT+
Sbjct: 18 LGEGGFGPVYKGTLLSGDEIAVKRMSKTS 104
>gb|BM101004.2|BM101004 EBpi01_SQ002_J03_R pistil, 1 DPA, no treatment, cv Optic, EBpi01
Hordeum vulgare subsp. vulgare cDNA clone
EBpi01_SQ002_J03 5', mRNA sequence
Length = 557
Score = 149 bits (320), Expect(2) = 1e-043
Identities = 58/94 (61%), Positives = 77/94 (81%)
Frame = +2 / +1
Query: 347 GAAKGLSYLHHDCSPRIIHRDIKSSNILLDGSFEARVSDFGLAKLLEDEESHITTIVAGT 526
G A+GLSYLH + S R++HRDIK+SNILLD + ++SDFGLAKL +D+++H++T VAGT
Sbjct: 1 GVARGLSYLHEESSIRVVHRDIKASNILLDANLNPKISDFGLAKLYDDQKTHVSTKVAGT 180
Query: 527 FGYLAPEYMQFGRATEKTDVYSFGVLVLEILSGK 628
FGYLAPEY G TEK DV++FGV+VLE L+G+
Sbjct: 181 FGYLAPEYAMRGHMTEKIDVFAFGVVVLETLAGR 282
Score = 47.8 bits (98), Expect(2) = 1e-043
Identities = 24/78 (30%), Positives = 39/78 (50%)
Frame = +2 / +1
Query: 629 RPTDASFIEKGLNIVGWLNFLAGENREREIVDLNCEGVHTETLDALLSLAKQCVSSLPEE 808
RP ++ E + I W+ L +N+ +++D E +E + + +A C P +
Sbjct: 280 RPNYSTKDENKVYIFEWVWELYEDNQPLDVLDPRLEEFDSEEVLRAIKVALLCTQGSPHQ 459
Query: 809 RPTMHRVVQMLESDVITP 862
RP+M RVV ML DV P
Sbjct: 460 RPSMSRVVAMLTGDVEAP 513
>gb|BU971791.1|BU971791 HB19L01r BC Hordeum vulgare subsp. vulgare cDNA clone HB19L01
5-PRIME, mRNA sequence
Length = 510
Score = 173 bits (373), Expect(2) = 1e-043
Identities = 70/123 (56%), Positives = 91/123 (73%)
Frame = +2 / +2
Query: 314 LDWDARINIILGAAKGLSYLHHDCSPRIIHRDIKSSNILLDGSFEARVSDFGLAKLLEDE 493
L WD R+ IILG+AKGL YLH P+++HRD+KSSNILLD + A++SDFGLAKLL E
Sbjct: 122 LTWDIRMKIILGSAKGLMYLHEGLEPKVVHRDVKSSNILLDKHWNAKLSDFGLAKLLGSE 301
Query: 494 ESHITTIVAGTFGYLAPEYMQFGRATEKTDVYSFGVLVLEILSGKRPTDASFIEKGLNIV 673
S++TT V GTFGY+APEY G E +DVYSFG+L++EI+SG+ P D + +N+V
Sbjct: 302 RSYVTTRVMGTFGYVAPEYAGTGMLNETSDVYSFGILIMEIISGRVPVDYNRPPGEVNLV 481
Query: 674 GWL 682
WL
Sbjct: 482 EWL 490
Score = 23.5 bits (45), Expect(2) = 1e-043
Identities = 6/18 (33%), Positives = 13/18 (72%)
Frame = +2 / +3
Query: 215 LRGYCNSPSSKLLIYDYL 268
L GYC + ++L+Y+++
Sbjct: 15 LLGYCAEGNQRMLVYEFV 68
>gb|CA020283.1|CA020283 HV14N17r HV Hordeum vulgare subsp. vulgare cDNA clone HV14N17
5-PRIME, mRNA sequence
Length = 494
Score = 99.6 bits (211), Expect(3) = 2e-043
Identities = 40/62 (64%), Positives = 46/62 (74%)
Frame = +2 / +2
Query: 299 EKSEQLDWDARINIILGAAKGLSYLHHDCSPRIIHRDIKSSNILLDGSFEARVSDFGLAK 478
+K L W R I + AAKGL YLHHDCSP I+HRD+KS+NILLD FEA V+DFGLAK
Sbjct: 137 KKGGHLQWATRYKIAVEAAKGLCYLHHDCSPPILHRDVKSNNILLDTDFEAHVADFGLAK 316
Query: 479 LL 484
L
Sbjct: 317 FL 322
Score = 62.5 bits (130), Expect(3) = 2e-043
Identities = 22/46 (47%), Positives = 36/46 (78%)
Frame = +2 / +2
Query: 497 SHITTIVAGTFGYLAPEYMQFGRATEKTDVYSFGVLVLEILSGKRP 634
S + +AG++GY+APEY + EK+DVYSFGV++LE+++G++P
Sbjct: 341 SECMSAIAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELVTGRKP 478
Score = 53.3 bits (110), Expect(3) = 2e-043
Identities = 19/43 (44%), Positives = 30/43 (69%)
Frame = +2 / +2
Query: 176 EILGSVKHRYLVNLRGYCNSPSSKLLIYDYLQGGSLDEVLHEK 304
+ LG ++HR++V L G+ + + LL+Y+Y+ GSL EVLH K
Sbjct: 11 QTLGRIRHRHIVRLLGFAANRETNLLVYEYMPNGSLGEVLHGK 139
>emb|AJ784275.3| Hordeum vulgare subsp. vulgare mRNA for putative lectin receptor-type
protein kinase (lrk1 gene)
Length = 2338
Score = 124 bits (266), Expect(3) = 1e-042
Identities = 56/123 (45%), Positives = 72/123 (58%)
Frame = +2 / +2
Query: 314 LDWDARINIILGAAKGLSYLHHDCSPRIIHRDIKSSNILLDGSFEARVSDFGLAKLLEDE 493
L W R +II G A L YLH + +IHRDIK SN+LLD + DFGLAK+ E
Sbjct: 1391 LCWSQRYSIIKGVASSLLYLHEEWEHVVIHRDIKPSNVLLDSKMNGWLGDFGLAKIYGRE 1570
Query: 494 ESHITTIVAGTFGYLAPEYMQFGRATEKTDVYSFGVLVLEILSGKRPTDASFIEKGLNIV 673
+ T VAGT GYLAPE + GR T TDVY+FG+ +LE+ G++P L +V
Sbjct: 1571 TAAPATHVAGTIGYLAPELARTGRPTPFTDVYAFGMFLLEVTCGRKPIFTDKQNNRLLLV 1750
Query: 674 GWL 682
W+
Sbjct: 1751 EWV 1759
Score = 51.9 bits (107), Expect(3) = 1e-042
Identities = 18/49 (36%), Positives = 31/49 (63%)
Frame = +2 / +2
Query: 161 FDRELEILGSVKHRYLVNLRGYCNSPSSKLLIYDYLQGGSLDEVLHEKS 307
F E+ +G ++H+ + L GYC LL+Y+Y++ GSLD+ LH ++
Sbjct: 1235 FIAEVVSIGHLRHQNIARLLGYCRRKGEFLLVYEYMENGSLDKYLHTRN 1381
Score = 35.9 bits (72), Expect(3) = 1e-042
Identities = 12/26 (46%), Positives = 18/26 (69%)
Frame = +1 / +2
Query: 10 KDILKKLETMDEENIIGAGGFGTVYK 87
KD+ E ++N++G GGFG+VYK
Sbjct: 1082 KDLFHATEGFSDKNLLGRGGFGSVYK 1159
>gb|BI776450.2|BI776450 EBpi05_SQ001_G12_R pistil, 8 DPA, no treatment, cv Optic, EBpi05
Hordeum vulgare subsp. vulgare cDNA clone
EBpi05_SQ001_G12 5', mRNA sequence
Length = 432
Score = 173 bits (373), Expect = 1e-042
Identities = 67/126 (53%), Positives = 95/126 (75%)
Frame = +2 / +1
Query: 503 ITTIVAGTFGYLAPEYMQFGRATEKTDVYSFGVLVLEILSGKRPTDASFIEKGLNIVGWL 682
+ T+VAGT GYLAPEY+Q G +TEK+DVYSFGVL+LE+++GKRPTD+ F+ KGLNIVGWL
Sbjct: 10 VRTVVAGTGGYLAPEYLQNGHSTEKSDVYSFGVLLLELVTGKRPTDSCFLNKGLNIVGWL 189
Query: 683 NFLAGENREREIVDLNCEGVHTETLDALLSLAKQCVSSLPEERPTMHRVVQMLESDVITP 862
N L+GE+R EI+D E ++ +L +A C + P +RP+M V++MLE ++++P
Sbjct: 190 NTLSGEHRLEEILDERSGDAEVEAVEGILDIAAMCTDADPGQRPSMGAVLKMLEEEILSP 369
Query: 863 CPSDFY 880
C S+ Y
Sbjct: 370 CLSELY 387
Score = 103 bits (219), Expect = 2e-021
Identities = 58/124 (46%), Positives = 62/124 (50%)
Frame = -1 / -2
Query: 879 *KSLGHGVITSDSSICTTLCIVGRSSGKELTHCLARESRASKVSVCTPSQFRSTISLSRF 700
* SL G S SSI +T I GR G H A S S S IS R
Sbjct: 386 *SSLRQGDRISSSSILSTAPIDGRCPGSASVHMAAMSRIPSTASTSASPDLSSRISSRRC 207
Query: 699 SPARKFNHPTMFNPFSMKDASVGRFPLSISSTRTPKL*TSVFSVALPNCIYSGAR*PNVP 520
SP F+ PTM P K SVG FP++ SS TPKL TS FSV P C YSGAR P VP
Sbjct: 206 SPLSVFSQPTMLRPLLRKQESVGLFPVTSSSKSTPKLYTSDFSVECPFCRYSGARYPPVP 27
Query: 519 ATIV 508
AT V
Sbjct: 26 ATTV 15
>gb|CA032771.1|CA032771 HX14C15r HX Hordeum vulgare subsp. vulgare cDNA clone HX14C15
5-PRIME, mRNA sequence
Length = 638
Score = 149 bits (319), Expect(2) = 2e-042
Identities = 58/103 (56%), Positives = 78/103 (75%)
Frame = +2 / +1
Query: 320 WDARINIILGAAKGLSYLHHDCSPRIIHRDIKSSNILLDGSFEARVSDFGLAKLLEDEES 499
W R +I +G A+GL+YLH + I+HRDIK+SNIL+D ++ ++ DFGLAKL D +
Sbjct: 154 WSVRSSICIGVARGLAYLHEEIPSPIVHRDIKASNILMDKNYVPKIGDFGLAKLFPDNIT 333
Query: 500 HITTIVAGTFGYLAPEYMQFGRATEKTDVYSFGVLVLEILSGK 628
HI+T VAGT GYLAPEY G+ T+K D+YSFGVLV+E++SGK
Sbjct: 334 HISTRVAGTTGYLAPEYAWHGQLTKKADIYSFGVLVIEVISGK 462
Score = 44.6 bits (91), Expect(2) = 2e-042
Identities = 17/37 (45%), Positives = 25/37 (67%)
Frame = +2 / +1
Query: 185 GSVKHRYLVNLRGYCNSPSSKLLIYDYLQGGSLDEVL 295
G+VKH LV L G C ++++L+Y+YL+ SLD L
Sbjct: 10 GNVKHPNLVELIGCCVEANNRILVYEYLENSSLDRAL 120
>gb|BU978248.1|BU978248 HA12N04r HA Hordeum vulgare subsp. vulgare cDNA clone HA12N04
5-PRIME, mRNA sequence
Length = 601
Score = 136 bits (292), Expect(2) = 3e-042
Identities = 52/90 (57%), Positives = 70/90 (77%)
Frame = +2 / +3
Query: 314 LDWDARINIILGAAKGLSYLHHDCSPRIIHRDIKSSNILLDGSFEARVSDFGLAKLLEDE 493
L WDAR++I+LG AKG++YLH P+++HRDIKSSNILLD + ++VSDFGLAKLL +
Sbjct: 330 LSWDARMDIVLGTAKGITYLHEGLEPKVVHRDIKSSNILLDKRWNSKVSDFGLAKLLGSD 509
Query: 494 ESHITTIVAGTFGYLAPEYMQFGRATEKTD 583
+++TT V GTFGY+APEY G E++D
Sbjct: 510 SNYVTTRVMGTFGYVAPEYASTGMLNERSD 599
Score = 56.1 bits (116), Expect(2) = 3e-042
Identities = 20/49 (40%), Positives = 34/49 (69%)
Frame = +2 / +3
Query: 152 DRFFDRELEILGSVKHRYLVNLRGYCNSPSSKLLIYDYLQGGSLDEVLH 298
+R F E+E +G V+H+ LV L GYC + ++L+Y+Y+ G+L++ LH
Sbjct: 159 EREFTVEVEAIGRVRHKNLVRLLGYCVEGAHRILVYEYVDNGNLEQWLH 305
>gb|CA025815.1|CA025815 HZ53D16r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ53D16
5-PRIME, mRNA sequence
Length = 569
Score = 96.4 bits (204), Expect(3) = 3e-042
Identities = 37/70 (52%), Positives = 49/70 (70%)
Frame = +2 / +3
Query: 302 KSEQLDWDARINIILGAAKGLSYLHHDCSPRIIHRDIKSSNILLDGSFEARVSDFGLAKL 481
KS QLDW R IILG A+GL YLH D +++HRD+K+SN+LLD ++SDFG+AK+
Sbjct: 234 KSAQLDWKTRHGIILGIARGLLYLHEDSLLKVVHRDLKASNVLLDNKMRPKISDFGMAKI 413
Query: 482 LEDEESHITT 511
EDE + T
Sbjct: 414 FEDECIEVNT 443
Score = 60.2 bits (125), Expect(3) = 3e-042
Identities = 23/39 (58%), Positives = 32/39 (82%)
Frame = +2 / +3
Query: 515 VAGTFGYLAPEYMQFGRATEKTDVYSFGVLVLEILSGKR 631
V GT+GY+APE++ G + K+DV+SFGVL++EIL GKR
Sbjct: 450 VVGTYGYMAPEFVMEGVFSVKSDVFSFGVLLIEILGGKR 566
Score = 54.2 bits (112), Expect(3) = 3e-042
Identities = 22/55 (40%), Positives = 32/55 (58%)
Frame = +2 / +3
Query: 161 FDRELEILGSVKHRYLVNLRGYCNSPSSKLLIYDYLQGGSLDEVLHEKSEQLDWD 325
F E+E++ ++HR LV L G+C KLL+Y+YL SLD L + S+ D
Sbjct: 87 FRNEVELIAKLQHRNLVRLLGWCAERDEKLLVYEYLPNRSLDAFLFDASKSAQLD 251
>gb|BJ464089.1|BJ464089 BJ464089 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags31m21 5', mRNA sequence
Length = 492
Score = 138 bits (295), Expect(2) = 4e-042
Identities = 57/113 (50%), Positives = 73/113 (64%)
Frame = +2 / +1
Query: 296 HEKSEQLDWDARINIILGAAKGLSYLHHDCSPRIIHRDIKSSNILLDGSFEARVSDFGLA 475
H LDW R I +GAA+ L+YLHH + IIH IKS+N+LLD F+A V DFGL
Sbjct: 154 HSSECLLDWRRRTFIAIGAARALAYLHHHATSPIIHGSIKSTNVLLDSDFQAHVGDFGLM 333
Query: 476 KLLEDEESHITTIVAGTFGYLAPEYMQFGRATEKTDVYSFGVLVLEILSGKRP 634
KL+ DE H I GY APEY+ FG+ T DVYSFG+++LE+ SG++P
Sbjct: 334 KLISDEIDHDKIIGENQRGYHAPEYVMFGKPTTGCDVYSFGIILLELTSGRKP 492
Score = 54.2 bits (112), Expect(2) = 4e-042
Identities = 21/46 (45%), Positives = 30/46 (65%)
Frame = +2 / +1
Query: 161 FDRELEILGSVKHRYLVNLRGYCNSPSSKLLIYDYLQGGSLDEVLH 298
F E+E LG V+H+ L++LRGYC ++L+YDY+ SL LH
Sbjct: 10 FAAEVESLGRVRHKNLLSLRGYCADGPERILVYDYMPNSSLFAHLH 147
>gb|CA011685.1|CA011685 HT03E08r HT Hordeum vulgare subsp. vulgare cDNA clone HT03E08
5-PRIME, mRNA sequence
Length = 529
Score = 93.2 bits (197), Expect(3) = 6e-042
Identities = 35/55 (63%), Positives = 47/55 (85%)
Frame = +2 / +2
Query: 311 QLDWDARINIILGAAKGLSYLHHDCSPRIIHRDIKSSNILLDGSFEARVSDFGLA 475
+L+W AR I +GAA+GL++LHH+C P IIHRD+KSSN+L+D + EARVSDFG+A
Sbjct: 365 RLNWAARRKIAIGAARGLAFLHHNCIPHIIHRDMKSSNVLVDENLEARVSDFGMA 529
Score = 68.0 bits (142), Expect(3) = 6e-042
Identities = 25/53 (47%), Positives = 38/53 (71%)
Frame = +2 / +2
Query: 152 DRFFDRELEILGSVKHRYLVNLRGYCNSPSSKLLIYDYLQGGSLDEVLHEKSE 310
DR F E+E +G +KHR LV L GYC +LL+YD+++ GSL++VLH++ +
Sbjct: 197 DREFTAEMETIGKIKHRNLVPLLGYCKIGEERLLMYDFMKYGSLEDVLHDRKK 355
Score = 48.7 bits (100), Expect(3) = 6e-042
Identities = 16/40 (40%), Positives = 29/40 (72%)
Frame = +1 / +2
Query: 13 DILKKLETMDEENIIGAGGFGTVYKLQMDDGNVLALKRIV 132
D+++ +++IG+GGFG VYK Q+ DG V+A+K+++
Sbjct: 59 DLVEATNGFHNDSLIGSGGFGDVYKAQLKDGRVVAIKKLI 178
>gb|BM372335.2|BM372335 EBro03_SQ004_K20_R root, 3 week, waterlogged, cv Optic, EBro03
Hordeum vulgare subsp. vulgare cDNA clone
EBro03_SQ004_K20 5', mRNA sequence
Length = 602
Score = 145 bits (311), Expect(2) = 1e-041
Identities = 56/107 (52%), Positives = 77/107 (71%)
Frame = +2 / +1
Query: 314 LDWDARINIILGAAKGLSYLHHDCSPRIIHRDIKSSNILLDGSFEARVSDFGLAKLLEDE 493
L W+ R+ I L AA+GL YLH C+P I+HRD+K+ NILLD + +SDFGL++ D
Sbjct: 172 LTWEQRLYIALDAAQGLEYLHESCTPSIVHRDVKTPNILLDKNLVGVISDFGLSRAFNDA 351
Query: 494 ESHITTIVAGTFGYLAPEYMQFGRATEKTDVYSFGVLVLEILSGKRP 634
+HI+T+ AGT GYL PEY + T KTDVYSFG+++LEI++G+ P
Sbjct: 352 HTHISTVAAGTLGYLDPEYHATFQLTVKTDVYSFGIVLLEIITGQSP 492
Score = 45.5 bits (93), Expect(2) = 1e-041
Identities = 16/42 (38%), Positives = 27/42 (64%)
Frame = +2 / +1
Query: 170 ELEILGSVKHRYLVNLRGYCNSPSSKLLIYDYLQGGSLDEVL 295
E++ L V H+ LV L+GYC + L+YD++ G+L ++L
Sbjct: 25 EVQTLSKVHHKNLVTLQGYCQNKKCLALVYDFMPRGNLQQLL 150
Database: Hordeum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:16 PM
Number of letters in database: 175,134,539
Number of sequences in database: 312,970
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 538,925,304
Number of Sequences: 312970
Number of extensions: 8925424
Number of successful extensions: 63784
Number of sequences better than 1.0e-020: 373
length of database: 58,378,179
effective HSP length: 53
effective length of database: 41,790,769
effective search space used: 13958116846
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)