TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2405245.2.2
(616 letters)
Database: Hordeum_nucl_with_EST.fasta
312,970 sequences; 175,134,539 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BF623132.1|BF623132 HVSMEa0014L04f Hordeum vulgare seedl... 202 2e-051
gb|AV909356.1|AV909356 AV909356 K. Sato unpublished cDNA li... 202 2e-051
gb|AV911246.1|AV911246 AV911246 K. Sato unpublished cDNA li... 202 2e-051
gb|BM816266.1|BM816266 HC01H12_T3.ab1 HC Hordeum vulgare su... 202 2e-051
gb|BM816267.1|BM816267 HB105E10_SK.ab1 HB Hordeum vulgare s... 202 2e-051
gb|BQ463470.1|BQ463470 HI05G01r HI Hordeum vulgare subsp. v... 202 2e-051
gb|BM370842.2|BM370842 EBro04_SQ002_H20_R root, 3 week, sal... 202 2e-051
gb|BQ756731.1|BQ756731 EBem09_SQ003_J13_R embryo, 1 Day ger... 202 2e-051
gb|BQ768330.1|BQ768330 EBro08_SQ011_L11_R root, 3 week, dro... 202 2e-051
gb|BU983773.1|BU983773 HA31A05r HA Hordeum vulgare subsp. v... 202 2e-051
gb|BU984019.1|BU984019 HA31L23r HA Hordeum vulgare subsp. v... 202 2e-051
gb|BU994116.1|BU994116 HM05M18r HM Hordeum vulgare subsp. v... 202 2e-051
gb|BQ662350.1|BQ662350 HS01P12w HS Hordeum vulgare subsp. v... 197 6e-050
gb|AL500754.1|AL500754 AL500754 Hordeum vulgare Barke roots... 195 1e-049
gb|AL510412.1|AL510412 AL510412 Hordeum vulgare Barke devel... 195 1e-049
gb|BI958959.1|BI958959 HVSMEn0017G17f Hordeum vulgare rachi... 195 1e-049
gb|BI959762.1|BI959762 HVSMEn0021F08f Hordeum vulgare rachi... 195 1e-049
gb|AV918153.1|AV918153 AV918153 K. Sato unpublished cDNA li... 195 1e-049
gb|BM816403.1|BM816403 HC108H05_SK.ab1 HC Hordeum vulgare s... 195 1e-049
gb|AJ432034.1|AJ432034 AJ432034 S00002 Hordeum vulgare subs... 195 1e-049
gb|BJ466653.1|BJ466653 BJ466653 K. Sato unpublished cDNA li... 195 1e-049
gb|BJ467967.1|BJ467967 BJ467967 K. Sato unpublished cDNA li... 195 1e-049
gb|BQ768409.1|BQ768409 EBro08_SQ011_K14_R root, 3 week, dro... 195 1e-049
gb|BQ762433.1|BQ762433 EBro01_SQ005_H19_R root, 3 week, hyd... 194 3e-049
gb|AV915524.1|AV915524 AV915524 K. Sato unpublished cDNA li... 193 7e-049
gb|BF257421.2|BF257421 HVSMEf0012N20f Hordeum vulgare seedl... 192 1e-048
gb|AV917477.1|AV917477 AV917477 K. Sato unpublished cDNA li... 192 1e-048
gb|AV920851.1|AV920851 AV920851 K. Sato unpublished cDNA li... 192 1e-048
gb|AV921149.1|AV921149 AV921149 K. Sato unpublished cDNA li... 192 1e-048
gb|AV921164.1|AV921164 AV921164 K. Sato unpublished cDNA li... 192 1e-048
gb|BJ467846.1|BJ467846 BJ467846 K. Sato unpublished cDNA li... 192 1e-048
gb|CV054745.1|CV054745 BNEL112h10 Barley EST endosperm libr... 192 1e-048
gb|BI958137.1|BI958137 HVSMEn0013J09f Hordeum vulgare rachi... 192 2e-048
gb|AV914685.1|AV914685 AV914685 K. Sato unpublished cDNA li... 190 7e-048
gb|AV916593.1|AV916593 AV916593 K. Sato unpublished cDNA li... 190 7e-048
gb|BJ464194.1|BJ464194 BJ464194 K. Sato unpublished cDNA li... 190 7e-048
gb|BF260200.2|BF260200 HVSMEf0021F24f Hordeum vulgare seedl... 189 9e-048
gb|BJ467893.1|BJ467893 BJ467893 K. Sato unpublished cDNA li... 187 6e-047
gb|BQ766482.1|BQ766482 EBro08_SQ006_N06_R root, 3 week, dro... 183 6e-046
gb|AV920622.1|AV920622 AV920622 K. Sato unpublished cDNA li... 162 5e-045
gb|AL511829.1|AL511829 AL511829 Hordeum vulgare Barke devel... 179 1e-044
gb|AV919777.1|AV919777 AV919777 K. Sato unpublished cDNA li... 159 6e-044
gb|AV918120.1|AV918120 AV918120 K. Sato unpublished cDNA li... 159 6e-044
gb|CB880777.1|CB880777 HM07M18w HM Hordeum vulgare subsp. v... 175 2e-043
gb|AJ463225.1|AJ463225 AJ463225 S00002 Hordeum vulgare subs... 175 2e-043
gb|BJ466501.1|BJ466501 BJ466501 K. Sato unpublished cDNA li... 174 4e-043
gb|AL502363.1|AL502363 AL502363 Hordeum vulgare Barke roots... 116 1e-042
gb|AV915738.1|AV915738 AV915738 K. Sato unpublished cDNA li... 164 4e-040
gb|BM370810.2|BM370810 EBro04_SQ002_F16_R root, 3 week, sal... 163 9e-040
gb|AW982536.3|AW982536 HVSMEg0003I12f Hordeum vulgare pre-a... 162 2e-039
gb|AV921737.1|AV921737 AV921737 K. Sato unpublished cDNA li... 162 2e-039
gb|AL512025.1|AL512025 AL512025 Hordeum vulgare Barke devel... 157 4e-038
gb|BQ766369.1|BQ766369 EBro08_SQ005_E20_R root, 3 week, dro... 155 1e-037
gb|BQ459760.1|BQ459760 HA08C16r HA Hordeum vulgare subsp. v... 152 1e-036
gb|BQ657495.1|BQ657495 HA08C16u HA Hordeum vulgare subsp. v... 152 1e-036
gb|CK122417.1|CK122417 BES1824103e24 BES1824 Hordeum vulgar... 151 3e-036
gb|AL509867.1|AL509867 AL509867 Hordeum vulgare Barke devel... 150 5e-036
gb|BI959767.1|BI959767 HVSMEn0021F18f Hordeum vulgare rachi... 142 1e-035
gb|BU983739.1|BU983739 HA30O06r HA Hordeum vulgare subsp. v... 132 2e-030
gb|BF253761.2|BF253761 HVSMEf0002A22f Hordeum vulgare seedl... 95 2e-027
gb|BU994867.1|BU994867 HM08H04r HM Hordeum vulgare subsp. v... 120 8e-027
gb|CV063161.1|CV063161 BNEL87c6 Barley EST endosperm librar... 114 4e-025
gb|CB880990.1|CB880990 HM08H04w HM Hordeum vulgare subsp. v... 111 3e-024
gb|BQ767763.1|BQ767763 EBro08_SQ009_D22_R root, 3 week, dro... 111 3e-024
gb|BJ467113.1|BJ467113 BJ467113 K. Sato unpublished cDNA li... 106 8e-023
gb|BQ768396.1|BQ768396 EBro08_SQ011_H16_R root, 3 week, dro... 106 8e-023
gb|BQ462810.1|BQ462810 HI02B08r HI Hordeum vulgare subsp. v... 106 1e-022
gb|AL500306.1|AL500306 AL500306 Hordeum vulgare Barke etiol... 105 2e-022
gb|CB858524.1|CB858524 HI07F20w HI Hordeum vulgare subsp. v... 103 5e-022
gb|BI959146.1|BI959146 HVSMEn0018G05f Hordeum vulgare rachi... 103 7e-022
>gb|BF623132.1|BF623132 HVSMEa0014L04f Hordeum vulgare seedling shoot EST library
HVcDNA0001 (Cold stress) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEa0014L04f, mRNA sequence
Length = 830
Score = 202 bits (435), Expect = 2e-051
Identities = 79/90 (87%), Positives = 86/90 (95%)
Frame = +2 / +2
Query: 14 SPTAIKQVNCVWDAYEATKGAHGVCILTEWDEFKTLDYQKIFDNMQKPAFVFDGRNIIDP 193
SPTA+KQV+ VWDAYEATKGAH VCILTEW+EFK+LDY+KIFDNMQKPAFVFDGRN++D
Sbjct: 212 SPTAVKQVSVVWDAYEATKGAHAVCILTEWNEFKSLDYKKIFDNMQKPAFVFDGRNVVDA 391
Query: 194 EKLREIGFIVYSIGKPLDAWLKDMPAVA*F 283
EKLREIGFIVYSIGKPLD WLKDMPAVA*F
Sbjct: 392 EKLREIGFIVYSIGKPLDGWLKDMPAVA*F 481
Score = 177 bits (382), Expect = 4e-044
Identities = 77/91 (84%), Positives = 81/91 (89%)
Frame = -1 / -2
Query: 283 ELSDRGHVLKPGVERLADGVDDEADLPQLLRVDDVAAVEDEGGLLHVVEDLLVVQGLELV 104
EL D GHVL+P VERLADGVDDEADLP+LL VDDVAAVEDEG LLHVVEDLLVVQ LELV
Sbjct: 481 ELGDGGHVLEPPVERLADGVDDEADLPELLGVDDVAAVEDEGRLLHVVEDLLVVQRLELV 302
Query: 103 PLGQDAHPVGALGGLVRVPHAVHLFNGRGAR 11
PLG+DAH VGALGGLVRVPH HL +GRGAR
Sbjct: 301 PLGEDAHGVGALGGLVRVPHHAHLLHGRGAR 209
Score = 167 bits (359), Expect = 5e-041
Identities = 75/92 (81%), Positives = 77/92 (83%)
Frame = -2 / -3
Query: 288 QTN*ATAGMSLSQASSGLPME*TMKPISLNFSGSMMLRPSKTKAGFCMLSKIFW*SRVLN 109
+ N*ATAGMSLS SSGLPME*TMKPISL+FS S LRPSKTKAGFCMLSKIF *S LN
Sbjct: 486 RAN*ATAGMSLSHPSSGLPME*TMKPISLSFSASTTLRPSKTKAGFCMLSKIFL*SSDLN 307
Query: 108 SSHSVRMHTPWAPLVASYASHTQFTCLMAVGL 13
S HSVRMHT WAPLVASYASHT TC AVGL
Sbjct: 306 SFHSVRMHTAWAPLVASYASHTTLTCFTAVGL 211
>gb|AV909356.1|AV909356 AV909356 K. Sato unpublished cDNA library, cv. Akashinriki
vegetative stage leaves Hordeum vulgare subsp. vulgare
cDNA clone baak12i15 5', mRNA sequence
Length = 662
Score = 202 bits (435), Expect = 2e-051
Identities = 79/90 (87%), Positives = 86/90 (95%)
Frame = +2 / +2
Query: 14 SPTAIKQVNCVWDAYEATKGAHGVCILTEWDEFKTLDYQKIFDNMQKPAFVFDGRNIIDP 193
SPTA+KQV+ VWDAYEATKGAH VCILTEW+EFK+LDY+KIFDNMQKPAFVFDGRN++D
Sbjct: 26 SPTAVKQVSVVWDAYEATKGAHAVCILTEWNEFKSLDYKKIFDNMQKPAFVFDGRNVVDA 205
Query: 194 EKLREIGFIVYSIGKPLDAWLKDMPAVA*F 283
EKLREIGFIVYSIGKPLD WLKDMPAVA*F
Sbjct: 206 EKLREIGFIVYSIGKPLDGWLKDMPAVA*F 295
Score = 177 bits (382), Expect = 4e-044
Identities = 77/91 (84%), Positives = 81/91 (89%)
Frame = -1 / -2
Query: 283 ELSDRGHVLKPGVERLADGVDDEADLPQLLRVDDVAAVEDEGGLLHVVEDLLVVQGLELV 104
EL D GHVL+P VERLADGVDDEADLP+LL VDDVAAVEDEG LLHVVEDLLVVQ LELV
Sbjct: 295 ELGDGGHVLEPPVERLADGVDDEADLPELLGVDDVAAVEDEGRLLHVVEDLLVVQRLELV 116
Query: 103 PLGQDAHPVGALGGLVRVPHAVHLFNGRGAR 11
PLG+DAH VGALGGLVRVPH HL +GRGAR
Sbjct: 115 PLGEDAHGVGALGGLVRVPHHAHLLHGRGAR 23
Score = 167 bits (359), Expect = 5e-041
Identities = 75/92 (81%), Positives = 77/92 (83%)
Frame = -2 / -3
Query: 288 QTN*ATAGMSLSQASSGLPME*TMKPISLNFSGSMMLRPSKTKAGFCMLSKIFW*SRVLN 109
+ N*ATAGMSLS SSGLPME*TMKPISL+FS S LRPSKTKAGFCMLSKIF *S LN
Sbjct: 300 RAN*ATAGMSLSHPSSGLPME*TMKPISLSFSASTTLRPSKTKAGFCMLSKIFL*SSDLN 121
Query: 108 SSHSVRMHTPWAPLVASYASHTQFTCLMAVGL 13
S HSVRMHT WAPLVASYASHT TC AVGL
Sbjct: 120 SFHSVRMHTAWAPLVASYASHTTLTCFTAVGL 25
>gb|AV911246.1|AV911246 AV911246 K. Sato unpublished cDNA library, cv. Akashinriki
vegetative stage leaves Hordeum vulgare subsp. vulgare
cDNA clone baak12i15 3', mRNA sequence
Length = 606
Score = 202 bits (435), Expect = 2e-051
Identities = 79/90 (87%), Positives = 86/90 (95%)
Frame = +2 / -3
Query: 14 SPTAIKQVNCVWDAYEATKGAHGVCILTEWDEFKTLDYQKIFDNMQKPAFVFDGRNIIDP 193
SPTA+KQV+ VWDAYEATKGAH VCILTEW+EFK+LDY+KIFDNMQKPAFVFDGRN++D
Sbjct: 601 SPTAVKQVSVVWDAYEATKGAHAVCILTEWNEFKSLDYKKIFDNMQKPAFVFDGRNVVDA 422
Query: 194 EKLREIGFIVYSIGKPLDAWLKDMPAVA*F 283
EKLREIGFIVYSIGKPLD WLKDMPAVA*F
Sbjct: 421 EKLREIGFIVYSIGKPLDGWLKDMPAVA*F 332
Score = 177 bits (382), Expect = 4e-044
Identities = 77/91 (84%), Positives = 81/91 (89%)
Frame = -1 / +2
Query: 283 ELSDRGHVLKPGVERLADGVDDEADLPQLLRVDDVAAVEDEGGLLHVVEDLLVVQGLELV 104
EL D GHVL+P VERLADGVDDEADLP+LL VDDVAAVEDEG LLHVVEDLLVVQ LELV
Sbjct: 332 ELGDGGHVLEPPVERLADGVDDEADLPELLGVDDVAAVEDEGRLLHVVEDLLVVQRLELV 511
Query: 103 PLGQDAHPVGALGGLVRVPHAVHLFNGRGAR 11
PLG+DAH VGALGGLVRVPH HL +GRGAR
Sbjct: 512 PLGEDAHGVGALGGLVRVPHHAHLLHGRGAR 604
Score = 167 bits (359), Expect = 5e-041
Identities = 75/92 (81%), Positives = 77/92 (83%)
Frame = -2 / +3
Query: 288 QTN*ATAGMSLSQASSGLPME*TMKPISLNFSGSMMLRPSKTKAGFCMLSKIFW*SRVLN 109
+ N*ATAGMSLS SSGLPME*TMKPISL+FS S LRPSKTKAGFCMLSKIF *S LN
Sbjct: 327 RAN*ATAGMSLSHPSSGLPME*TMKPISLSFSASTTLRPSKTKAGFCMLSKIFL*SSDLN 506
Query: 108 SSHSVRMHTPWAPLVASYASHTQFTCLMAVGL 13
S HSVRMHT WAPLVASYASHT TC AVGL
Sbjct: 507 SFHSVRMHTAWAPLVASYASHTTLTCFTAVGL 602
>gb|BM816266.1|BM816266 HC01H12_T3.ab1 HC Hordeum vulgare subsp. vulgare cDNA clone
HC01H12_T3.ab1 similar to Hydrogen
dehydrogenase,Phosphoglycerate dehydrogenase,Glucose
1-dehydrogenase,Hydrogenase,Cytochrome-c3
hydrogenase,GDP-mannose 6-dehydrogenase,UDP-glucose
6-dehydrogenase,Glycine dehydrogenase,Transferred entry:
1.18.99.1,, mRNA sequence
Length = 756
Score = 202 bits (435), Expect = 2e-051
Identities = 79/90 (87%), Positives = 86/90 (95%)
Frame = +2 / +3
Query: 14 SPTAIKQVNCVWDAYEATKGAHGVCILTEWDEFKTLDYQKIFDNMQKPAFVFDGRNIIDP 193
SPTA+KQV+ VWDAYEATKGAH VCILTEW+EFK+LDY+KIFDNMQKPAFVFDGRN++D
Sbjct: 255 SPTAVKQVSVVWDAYEATKGAHAVCILTEWNEFKSLDYKKIFDNMQKPAFVFDGRNVVDA 434
Query: 194 EKLREIGFIVYSIGKPLDAWLKDMPAVA*F 283
EKLREIGFIVYSIGKPLD WLKDMPAVA*F
Sbjct: 435 EKLREIGFIVYSIGKPLDGWLKDMPAVA*F 524
Score = 177 bits (382), Expect = 4e-044
Identities = 77/91 (84%), Positives = 81/91 (89%)
Frame = -1 / -2
Query: 283 ELSDRGHVLKPGVERLADGVDDEADLPQLLRVDDVAAVEDEGGLLHVVEDLLVVQGLELV 104
EL D GHVL+P VERLADGVDDEADLP+LL VDDVAAVEDEG LLHVVEDLLVVQ LELV
Sbjct: 524 ELGDGGHVLEPPVERLADGVDDEADLPELLGVDDVAAVEDEGRLLHVVEDLLVVQRLELV 345
Query: 103 PLGQDAHPVGALGGLVRVPHAVHLFNGRGAR 11
PLG+DAH VGALGGLVRVPH HL +GRGAR
Sbjct: 344 PLGEDAHGVGALGGLVRVPHHAHLLHGRGAR 252
Score = 167 bits (359), Expect = 5e-041
Identities = 75/92 (81%), Positives = 77/92 (83%)
Frame = -2 / -3
Query: 288 QTN*ATAGMSLSQASSGLPME*TMKPISLNFSGSMMLRPSKTKAGFCMLSKIFW*SRVLN 109
+ N*ATAGMSLS SSGLPME*TMKPISL+FS S LRPSKTKAGFCMLSKIF *S LN
Sbjct: 529 RAN*ATAGMSLSHPSSGLPME*TMKPISLSFSASTTLRPSKTKAGFCMLSKIFL*SSDLN 350
Query: 108 SSHSVRMHTPWAPLVASYASHTQFTCLMAVGL 13
S HSVRMHT WAPLVASYASHT TC AVGL
Sbjct: 349 SFHSVRMHTAWAPLVASYASHTTLTCFTAVGL 254
>gb|BM816267.1|BM816267 HB105E10_SK.ab1 HB Hordeum vulgare subsp. vulgare cDNA clone
HB105E10_SK.ab1 similar to Hydrogen
dehydrogenase,Phosphoglycerate dehydrogenase,Glucose
1-dehydrogenase,Hydrogenase,Cytochrome-c3
hydrogenase,GDP-mannose 6-dehydrogenase,UDP-glucose
6-dehydrogenase,Glycine dehydrogenase,Transferred entry:
1.18.99.1,, mRNA sequence
Length = 878
Score = 202 bits (435), Expect = 2e-051
Identities = 79/90 (87%), Positives = 86/90 (95%)
Frame = +2 / +2
Query: 14 SPTAIKQVNCVWDAYEATKGAHGVCILTEWDEFKTLDYQKIFDNMQKPAFVFDGRNIIDP 193
SPTA+KQV+ VWDAYEATKGAH VCILTEW+EFK+LDY+KIFDNMQKPAFVFDGRN++D
Sbjct: 308 SPTAVKQVSVVWDAYEATKGAHAVCILTEWNEFKSLDYKKIFDNMQKPAFVFDGRNVVDA 487
Query: 194 EKLREIGFIVYSIGKPLDAWLKDMPAVA*F 283
EKLREIGFIVYSIGKPLD WLKDMPAVA*F
Sbjct: 488 EKLREIGFIVYSIGKPLDGWLKDMPAVA*F 577
Score = 177 bits (382), Expect = 4e-044
Identities = 77/91 (84%), Positives = 81/91 (89%)
Frame = -1 / -2
Query: 283 ELSDRGHVLKPGVERLADGVDDEADLPQLLRVDDVAAVEDEGGLLHVVEDLLVVQGLELV 104
EL D GHVL+P VERLADGVDDEADLP+LL VDDVAAVEDEG LLHVVEDLLVVQ LELV
Sbjct: 577 ELGDGGHVLEPPVERLADGVDDEADLPELLGVDDVAAVEDEGRLLHVVEDLLVVQRLELV 398
Query: 103 PLGQDAHPVGALGGLVRVPHAVHLFNGRGAR 11
PLG+DAH VGALGGLVRVPH HL +GRGAR
Sbjct: 397 PLGEDAHGVGALGGLVRVPHHAHLLHGRGAR 305
Score = 167 bits (359), Expect = 5e-041
Identities = 75/92 (81%), Positives = 77/92 (83%)
Frame = -2 / -3
Query: 288 QTN*ATAGMSLSQASSGLPME*TMKPISLNFSGSMMLRPSKTKAGFCMLSKIFW*SRVLN 109
+ N*ATAGMSLS SSGLPME*TMKPISL+FS S LRPSKTKAGFCMLSKIF *S LN
Sbjct: 582 RAN*ATAGMSLSHPSSGLPME*TMKPISLSFSASTTLRPSKTKAGFCMLSKIFL*SSDLN 403
Query: 108 SSHSVRMHTPWAPLVASYASHTQFTCLMAVGL 13
S HSVRMHT WAPLVASYASHT TC AVGL
Sbjct: 402 SFHSVRMHTAWAPLVASYASHTTLTCFTAVGL 307
>gb|BQ463470.1|BQ463470 HI05G01r HI Hordeum vulgare subsp. vulgare cDNA clone HI05G01
5-PRIME, mRNA sequence
Length = 478
Score = 202 bits (435), Expect = 2e-051
Identities = 79/90 (87%), Positives = 86/90 (95%)
Frame = +2 / +3
Query: 14 SPTAIKQVNCVWDAYEATKGAHGVCILTEWDEFKTLDYQKIFDNMQKPAFVFDGRNIIDP 193
SPTA+KQV+ VWDAYEATKGAH VCILTEW+EFK+LDY+KIFDNMQKPAFVFDGRN++D
Sbjct: 78 SPTAVKQVSVVWDAYEATKGAHAVCILTEWNEFKSLDYKKIFDNMQKPAFVFDGRNVVDA 257
Query: 194 EKLREIGFIVYSIGKPLDAWLKDMPAVA*F 283
EKLREIGFIVYSIGKPLD WLKDMPAVA*F
Sbjct: 258 EKLREIGFIVYSIGKPLDGWLKDMPAVA*F 347
Score = 177 bits (382), Expect = 4e-044
Identities = 77/91 (84%), Positives = 81/91 (89%)
Frame = -1 / -3
Query: 283 ELSDRGHVLKPGVERLADGVDDEADLPQLLRVDDVAAVEDEGGLLHVVEDLLVVQGLELV 104
EL D GHVL+P VERLADGVDDEADLP+LL VDDVAAVEDEG LLHVVEDLLVVQ LELV
Sbjct: 347 ELGDGGHVLEPPVERLADGVDDEADLPELLGVDDVAAVEDEGRLLHVVEDLLVVQRLELV 168
Query: 103 PLGQDAHPVGALGGLVRVPHAVHLFNGRGAR 11
PLG+DAH VGALGGLVRVPH HL +GRGAR
Sbjct: 167 PLGEDAHGVGALGGLVRVPHHAHLLHGRGAR 75
Score = 167 bits (359), Expect = 5e-041
Identities = 75/92 (81%), Positives = 77/92 (83%)
Frame = -2 / -1
Query: 288 QTN*ATAGMSLSQASSGLPME*TMKPISLNFSGSMMLRPSKTKAGFCMLSKIFW*SRVLN 109
+ N*ATAGMSLS SSGLPME*TMKPISL+FS S LRPSKTKAGFCMLSKIF *S LN
Sbjct: 352 RAN*ATAGMSLSHPSSGLPME*TMKPISLSFSASTTLRPSKTKAGFCMLSKIFL*SSDLN 173
Query: 108 SSHSVRMHTPWAPLVASYASHTQFTCLMAVGL 13
S HSVRMHT WAPLVASYASHT TC AVGL
Sbjct: 172 SFHSVRMHTAWAPLVASYASHTTLTCFTAVGL 77
>gb|BM370842.2|BM370842 EBro04_SQ002_H20_R root, 3 week, salt-stressed, cv Optic, EBro04
Hordeum vulgare subsp. vulgare cDNA clone
EBro04_SQ002_H20 5', mRNA sequence
Length = 650
Score = 202 bits (435), Expect = 2e-051
Identities = 79/90 (87%), Positives = 86/90 (95%)
Frame = +2 / +3
Query: 14 SPTAIKQVNCVWDAYEATKGAHGVCILTEWDEFKTLDYQKIFDNMQKPAFVFDGRNIIDP 193
SPTA+KQV+ VWDAYEATKGAH VCILTEW+EFK+LDY+KIFDNMQKPAFVFDGRN++D
Sbjct: 321 SPTAVKQVSVVWDAYEATKGAHAVCILTEWNEFKSLDYKKIFDNMQKPAFVFDGRNVVDA 500
Query: 194 EKLREIGFIVYSIGKPLDAWLKDMPAVA*F 283
EKLREIGFIVYSIGKPLD WLKDMPAVA*F
Sbjct: 501 EKLREIGFIVYSIGKPLDGWLKDMPAVA*F 590
Score = 177 bits (382), Expect = 4e-044
Identities = 77/91 (84%), Positives = 81/91 (89%)
Frame = -1 / -1
Query: 283 ELSDRGHVLKPGVERLADGVDDEADLPQLLRVDDVAAVEDEGGLLHVVEDLLVVQGLELV 104
EL D GHVL+P VERLADGVDDEADLP+LL VDDVAAVEDEG LLHVVEDLLVVQ LELV
Sbjct: 590 ELGDGGHVLEPPVERLADGVDDEADLPELLGVDDVAAVEDEGRLLHVVEDLLVVQRLELV 411
Query: 103 PLGQDAHPVGALGGLVRVPHAVHLFNGRGAR 11
PLG+DAH VGALGGLVRVPH HL +GRGAR
Sbjct: 410 PLGEDAHGVGALGGLVRVPHHAHLLHGRGAR 318
Score = 167 bits (359), Expect = 5e-041
Identities = 75/92 (81%), Positives = 77/92 (83%)
Frame = -2 / -2
Query: 288 QTN*ATAGMSLSQASSGLPME*TMKPISLNFSGSMMLRPSKTKAGFCMLSKIFW*SRVLN 109
+ N*ATAGMSLS SSGLPME*TMKPISL+FS S LRPSKTKAGFCMLSKIF *S LN
Sbjct: 595 RAN*ATAGMSLSHPSSGLPME*TMKPISLSFSASTTLRPSKTKAGFCMLSKIFL*SSDLN 416
Query: 108 SSHSVRMHTPWAPLVASYASHTQFTCLMAVGL 13
S HSVRMHT WAPLVASYASHT TC AVGL
Sbjct: 415 SFHSVRMHTAWAPLVASYASHTTLTCFTAVGL 320
>gb|BQ756731.1|BQ756731 EBem09_SQ003_J13_R embryo, 1 Day germination, no treatment, cv
Optic, EBem09 Hordeum vulgare subsp. vulgare cDNA clone
EBem09_SQ003_J13 5', mRNA sequence
Length = 484
Score = 202 bits (435), Expect = 2e-051
Identities = 79/90 (87%), Positives = 86/90 (95%)
Frame = +2 / +2
Query: 14 SPTAIKQVNCVWDAYEATKGAHGVCILTEWDEFKTLDYQKIFDNMQKPAFVFDGRNIIDP 193
SPTA+KQV+ VWDAYEATKGAH VCILTEW+EFK+LDY+KIFDNMQKPAFVFDGRN++D
Sbjct: 77 SPTAVKQVSVVWDAYEATKGAHAVCILTEWNEFKSLDYKKIFDNMQKPAFVFDGRNVVDA 256
Query: 194 EKLREIGFIVYSIGKPLDAWLKDMPAVA*F 283
EKLREIGFIVYSIGKPLD WLKDMPAVA*F
Sbjct: 257 EKLREIGFIVYSIGKPLDGWLKDMPAVA*F 346
Score = 177 bits (382), Expect = 4e-044
Identities = 77/91 (84%), Positives = 81/91 (89%)
Frame = -1 / -1
Query: 283 ELSDRGHVLKPGVERLADGVDDEADLPQLLRVDDVAAVEDEGGLLHVVEDLLVVQGLELV 104
EL D GHVL+P VERLADGVDDEADLP+LL VDDVAAVEDEG LLHVVEDLLVVQ LELV
Sbjct: 346 ELGDGGHVLEPPVERLADGVDDEADLPELLGVDDVAAVEDEGRLLHVVEDLLVVQRLELV 167
Query: 103 PLGQDAHPVGALGGLVRVPHAVHLFNGRGAR 11
PLG+DAH VGALGGLVRVPH HL +GRGAR
Sbjct: 166 PLGEDAHGVGALGGLVRVPHHAHLLHGRGAR 74
Score = 167 bits (359), Expect = 5e-041
Identities = 75/92 (81%), Positives = 77/92 (83%)
Frame = -2 / -2
Query: 288 QTN*ATAGMSLSQASSGLPME*TMKPISLNFSGSMMLRPSKTKAGFCMLSKIFW*SRVLN 109
+ N*ATAGMSLS SSGLPME*TMKPISL+FS S LRPSKTKAGFCMLSKIF *S LN
Sbjct: 351 RAN*ATAGMSLSHPSSGLPME*TMKPISLSFSASTTLRPSKTKAGFCMLSKIFL*SSDLN 172
Query: 108 SSHSVRMHTPWAPLVASYASHTQFTCLMAVGL 13
S HSVRMHT WAPLVASYASHT TC AVGL
Sbjct: 171 SFHSVRMHTAWAPLVASYASHTTLTCFTAVGL 76
>gb|BQ768330.1|BQ768330 EBro08_SQ011_L11_R root, 3 week, drought-stressed, cv Optic, EBro08
Hordeum vulgare subsp. vulgare cDNA clone
EBro08_SQ011_L11 5', mRNA sequence
Length = 570
Score = 202 bits (435), Expect = 2e-051
Identities = 79/90 (87%), Positives = 86/90 (95%)
Frame = +2 / +3
Query: 14 SPTAIKQVNCVWDAYEATKGAHGVCILTEWDEFKTLDYQKIFDNMQKPAFVFDGRNIIDP 193
SPTA+KQV+ VWDAYEATKGAH VCILTEW+EFK+LDY+KIFDNMQKPAFVFDGRN++D
Sbjct: 240 SPTAVKQVSVVWDAYEATKGAHAVCILTEWNEFKSLDYKKIFDNMQKPAFVFDGRNVVDA 419
Query: 194 EKLREIGFIVYSIGKPLDAWLKDMPAVA*F 283
EKLREIGFIVYSIGKPLD WLKDMPAVA*F
Sbjct: 420 EKLREIGFIVYSIGKPLDGWLKDMPAVA*F 509
Score = 177 bits (382), Expect = 4e-044
Identities = 77/91 (84%), Positives = 81/91 (89%)
Frame = -1 / -2
Query: 283 ELSDRGHVLKPGVERLADGVDDEADLPQLLRVDDVAAVEDEGGLLHVVEDLLVVQGLELV 104
EL D GHVL+P VERLADGVDDEADLP+LL VDDVAAVEDEG LLHVVEDLLVVQ LELV
Sbjct: 509 ELGDGGHVLEPPVERLADGVDDEADLPELLGVDDVAAVEDEGRLLHVVEDLLVVQRLELV 330
Query: 103 PLGQDAHPVGALGGLVRVPHAVHLFNGRGAR 11
PLG+DAH VGALGGLVRVPH HL +GRGAR
Sbjct: 329 PLGEDAHGVGALGGLVRVPHHAHLLHGRGAR 237
Score = 167 bits (359), Expect = 5e-041
Identities = 75/92 (81%), Positives = 77/92 (83%)
Frame = -2 / -3
Query: 288 QTN*ATAGMSLSQASSGLPME*TMKPISLNFSGSMMLRPSKTKAGFCMLSKIFW*SRVLN 109
+ N*ATAGMSLS SSGLPME*TMKPISL+FS S LRPSKTKAGFCMLSKIF *S LN
Sbjct: 514 RAN*ATAGMSLSHPSSGLPME*TMKPISLSFSASTTLRPSKTKAGFCMLSKIFL*SSDLN 335
Query: 108 SSHSVRMHTPWAPLVASYASHTQFTCLMAVGL 13
S HSVRMHT WAPLVASYASHT TC AVGL
Sbjct: 334 SFHSVRMHTAWAPLVASYASHTTLTCFTAVGL 239
>gb|BU983773.1|BU983773 HA31A05r HA Hordeum vulgare subsp. vulgare cDNA clone HA31A05
5-PRIME, mRNA sequence
Length = 572
Score = 202 bits (435), Expect = 2e-051
Identities = 79/90 (87%), Positives = 86/90 (95%)
Frame = +2 / +3
Query: 14 SPTAIKQVNCVWDAYEATKGAHGVCILTEWDEFKTLDYQKIFDNMQKPAFVFDGRNIIDP 193
SPTA+KQV+ VWDAYEATKGAH VCILTEW+EFK+LDY+KIFDNMQKPAFVFDGRN++D
Sbjct: 63 SPTAVKQVSVVWDAYEATKGAHAVCILTEWNEFKSLDYKKIFDNMQKPAFVFDGRNVVDA 242
Query: 194 EKLREIGFIVYSIGKPLDAWLKDMPAVA*F 283
EKLREIGFIVYSIGKPLD WLKDMPAVA*F
Sbjct: 243 EKLREIGFIVYSIGKPLDGWLKDMPAVA*F 332
Score = 177 bits (382), Expect = 4e-044
Identities = 77/91 (84%), Positives = 81/91 (89%)
Frame = -1 / -1
Query: 283 ELSDRGHVLKPGVERLADGVDDEADLPQLLRVDDVAAVEDEGGLLHVVEDLLVVQGLELV 104
EL D GHVL+P VERLADGVDDEADLP+LL VDDVAAVEDEG LLHVVEDLLVVQ LELV
Sbjct: 332 ELGDGGHVLEPPVERLADGVDDEADLPELLGVDDVAAVEDEGRLLHVVEDLLVVQRLELV 153
Query: 103 PLGQDAHPVGALGGLVRVPHAVHLFNGRGAR 11
PLG+DAH VGALGGLVRVPH HL +GRGAR
Sbjct: 152 PLGEDAHGVGALGGLVRVPHHAHLLHGRGAR 60
Score = 167 bits (359), Expect = 5e-041
Identities = 75/92 (81%), Positives = 77/92 (83%)
Frame = -2 / -2
Query: 288 QTN*ATAGMSLSQASSGLPME*TMKPISLNFSGSMMLRPSKTKAGFCMLSKIFW*SRVLN 109
+ N*ATAGMSLS SSGLPME*TMKPISL+FS S LRPSKTKAGFCMLSKIF *S LN
Sbjct: 337 RAN*ATAGMSLSHPSSGLPME*TMKPISLSFSASTTLRPSKTKAGFCMLSKIFL*SSDLN 158
Query: 108 SSHSVRMHTPWAPLVASYASHTQFTCLMAVGL 13
S HSVRMHT WAPLVASYASHT TC AVGL
Sbjct: 157 SFHSVRMHTAWAPLVASYASHTTLTCFTAVGL 62
>gb|BU984019.1|BU984019 HA31L23r HA Hordeum vulgare subsp. vulgare cDNA clone HA31L23
5-PRIME, mRNA sequence
Length = 565
Score = 202 bits (435), Expect = 2e-051
Identities = 79/90 (87%), Positives = 86/90 (95%)
Frame = +2 / +3
Query: 14 SPTAIKQVNCVWDAYEATKGAHGVCILTEWDEFKTLDYQKIFDNMQKPAFVFDGRNIIDP 193
SPTA+KQV+ VWDAYEATKGAH VCILTEW+EFK+LDY+KIFDNMQKPAFVFDGRN++D
Sbjct: 63 SPTAVKQVSVVWDAYEATKGAHAVCILTEWNEFKSLDYKKIFDNMQKPAFVFDGRNVVDA 242
Query: 194 EKLREIGFIVYSIGKPLDAWLKDMPAVA*F 283
EKLREIGFIVYSIGKPLD WLKDMPAVA*F
Sbjct: 243 EKLREIGFIVYSIGKPLDGWLKDMPAVA*F 332
Score = 177 bits (382), Expect = 4e-044
Identities = 77/91 (84%), Positives = 81/91 (89%)
Frame = -1 / -3
Query: 283 ELSDRGHVLKPGVERLADGVDDEADLPQLLRVDDVAAVEDEGGLLHVVEDLLVVQGLELV 104
EL D GHVL+P VERLADGVDDEADLP+LL VDDVAAVEDEG LLHVVEDLLVVQ LELV
Sbjct: 332 ELGDGGHVLEPPVERLADGVDDEADLPELLGVDDVAAVEDEGRLLHVVEDLLVVQRLELV 153
Query: 103 PLGQDAHPVGALGGLVRVPHAVHLFNGRGAR 11
PLG+DAH VGALGGLVRVPH HL +GRGAR
Sbjct: 152 PLGEDAHGVGALGGLVRVPHHAHLLHGRGAR 60
Score = 167 bits (359), Expect = 5e-041
Identities = 75/92 (81%), Positives = 77/92 (83%)
Frame = -2 / -1
Query: 288 QTN*ATAGMSLSQASSGLPME*TMKPISLNFSGSMMLRPSKTKAGFCMLSKIFW*SRVLN 109
+ N*ATAGMSLS SSGLPME*TMKPISL+FS S LRPSKTKAGFCMLSKIF *S LN
Sbjct: 337 RAN*ATAGMSLSHPSSGLPME*TMKPISLSFSASTTLRPSKTKAGFCMLSKIFL*SSDLN 158
Query: 108 SSHSVRMHTPWAPLVASYASHTQFTCLMAVGL 13
S HSVRMHT WAPLVASYASHT TC AVGL
Sbjct: 157 SFHSVRMHTAWAPLVASYASHTTLTCFTAVGL 62
>gb|BU994116.1|BU994116 HM05M18r HM Hordeum vulgare subsp. vulgare cDNA clone HM05M18
5-PRIME, mRNA sequence
Length = 497
Score = 202 bits (435), Expect = 2e-051
Identities = 79/90 (87%), Positives = 86/90 (95%)
Frame = +2 / +1
Query: 14 SPTAIKQVNCVWDAYEATKGAHGVCILTEWDEFKTLDYQKIFDNMQKPAFVFDGRNIIDP 193
SPTA+KQV+ VWDAYEATKGAH VCILTEW+EFK+LDY+KIFDNMQKPAFVFDGRN++D
Sbjct: 61 SPTAVKQVSVVWDAYEATKGAHAVCILTEWNEFKSLDYKKIFDNMQKPAFVFDGRNVVDA 240
Query: 194 EKLREIGFIVYSIGKPLDAWLKDMPAVA*F 283
EKLREIGFIVYSIGKPLD WLKDMPAVA*F
Sbjct: 241 EKLREIGFIVYSIGKPLDGWLKDMPAVA*F 330
Score = 177 bits (382), Expect = 4e-044
Identities = 77/91 (84%), Positives = 81/91 (89%)
Frame = -1 / -3
Query: 283 ELSDRGHVLKPGVERLADGVDDEADLPQLLRVDDVAAVEDEGGLLHVVEDLLVVQGLELV 104
EL D GHVL+P VERLADGVDDEADLP+LL VDDVAAVEDEG LLHVVEDLLVVQ LELV
Sbjct: 330 ELGDGGHVLEPPVERLADGVDDEADLPELLGVDDVAAVEDEGRLLHVVEDLLVVQRLELV 151
Query: 103 PLGQDAHPVGALGGLVRVPHAVHLFNGRGAR 11
PLG+DAH VGALGGLVRVPH HL +GRGAR
Sbjct: 150 PLGEDAHGVGALGGLVRVPHHAHLLHGRGAR 58
Score = 167 bits (359), Expect = 5e-041
Identities = 75/92 (81%), Positives = 77/92 (83%)
Frame = -2 / -1
Query: 288 QTN*ATAGMSLSQASSGLPME*TMKPISLNFSGSMMLRPSKTKAGFCMLSKIFW*SRVLN 109
+ N*ATAGMSLS SSGLPME*TMKPISL+FS S LRPSKTKAGFCMLSKIF *S LN
Sbjct: 335 RAN*ATAGMSLSHPSSGLPME*TMKPISLSFSASTTLRPSKTKAGFCMLSKIFL*SSDLN 156
Query: 108 SSHSVRMHTPWAPLVASYASHTQFTCLMAVGL 13
S HSVRMHT WAPLVASYASHT TC AVGL
Sbjct: 155 SFHSVRMHTAWAPLVASYASHTTLTCFTAVGL 60
>gb|BQ662350.1|BQ662350 HS01P12w HS Hordeum vulgare subsp. vulgare cDNA clone HS01P12
3-PRIME, mRNA sequence
Length = 653
Score = 197 bits (424), Expect = 6e-050
Identities = 77/90 (85%), Positives = 84/90 (93%)
Frame = +2 / -2
Query: 14 SPTAIKQVNCVWDAYEATKGAHGVCILTEWDEFKTLDYQKIFDNMQKPAFVFDGRNIIDP 193
SPT +KQV+ VW AYEATKGAH VCILTEW+EFK+LDY+KIFDNMQKPAFVFDGRN++D
Sbjct: 604 SPTXVKQVSVVWXAYEATKGAHAVCILTEWNEFKSLDYKKIFDNMQKPAFVFDGRNVVDA 425
Query: 194 EKLREIGFIVYSIGKPLDAWLKDMPAVA*F 283
EKLREIGFIVYSIGKPLD WLKDMPAVA*F
Sbjct: 424 EKLREIGFIVYSIGKPLDGWLKDMPAVA*F 335
Score = 177 bits (382), Expect = 4e-044
Identities = 77/91 (84%), Positives = 81/91 (89%)
Frame = -1 / +2
Query: 283 ELSDRGHVLKPGVERLADGVDDEADLPQLLRVDDVAAVEDEGGLLHVVEDLLVVQGLELV 104
EL D GHVL+P VERLADGVDDEADLP+LL VDDVAAVEDEG LLHVVEDLLVVQ LELV
Sbjct: 335 ELGDGGHVLEPPVERLADGVDDEADLPELLGVDDVAAVEDEGRLLHVVEDLLVVQRLELV 514
Query: 103 PLGQDAHPVGALGGLVRVPHAVHLFNGRGAR 11
PLG+DAH VGALGGLVRVPH HL +GRGAR
Sbjct: 515 PLGEDAHGVGALGGLVRVPHHAHLLHGRGAR 607
Score = 163 bits (351), Expect = 7e-040
Identities = 73/92 (79%), Positives = 75/92 (81%)
Frame = -2 / +3
Query: 288 QTN*ATAGMSLSQASSGLPME*TMKPISLNFSGSMMLRPSKTKAGFCMLSKIFW*SRVLN 109
+ N*ATAGMSLS SSGLPME*TMKPISL+FS S LRPSKTKAGFCMLSKIF *S LN
Sbjct: 330 RAN*ATAGMSLSHPSSGLPME*TMKPISLSFSASTTLRPSKTKAGFCMLSKIFL*SSDLN 509
Query: 108 SSHSVRMHTPWAPLVASYASHTQFTCLMAVGL 13
S HSVRMHT WAPLVASYA HT TC VGL
Sbjct: 510 SFHSVRMHTAWAPLVASYAXHTTLTCFTXVGL 605
>gb|AL500754.1|AL500754 AL500754 Hordeum vulgare Barke roots Hordeum vulgare subsp. vulgare
cDNA clone HW01M02u 3', mRNA sequence
Length = 582
Score = 195 bits (421), Expect = 1e-049
Identities = 75/91 (82%), Positives = 87/91 (95%)
Frame = +2 / -2
Query: 14 SPTAIKQVNCVWDAYEATKGAHGVCILTEWDEFKTLDYQKIFDNMQKPAFVFDGRNIIDP 193
SP+++KQV+ VWDAYEATKGAH VCILTEW+EFK LDYQKIF+NMQKPAFVFDGRN+++
Sbjct: 527 SPSSVKQVSVVWDAYEATKGAHAVCILTEWNEFKELDYQKIFNNMQKPAFVFDGRNVVNA 348
Query: 194 EKLREIGFIVYSIGKPLDAWLKDMPAVA*FV 286
+KLREIGFIVYSIGKPLDAWLKDMPA+A*F+
Sbjct: 347 DKLREIGFIVYSIGKPLDAWLKDMPAIA*FL 255
Score = 160 bits (343), Expect = 8e-039
Identities = 70/95 (73%), Positives = 79/95 (83%)
Frame = -1 / +3
Query: 295 STSDELSDRGHVLKPGVERLADGVDDEADLPQLLRVDDVAAVEDEGGLLHVVEDLLVVQG 116
S +EL DRGHVL+P +ERLADGVD+EA+LP+L+ VDDVA VEDEG LLHVVEDLLVVQ
Sbjct: 246 SCGEELGDRGHVLEPRIERLADGVDNEANLPELVGVDDVAPVEDEGRLLHVVEDLLVVQL 425
Query: 115 LELVPLGQDAHPVGALGGLVRVPHAVHLFNGRGAR 11
LELVPLGQDAH +G LGGLVRVPH HL + AR
Sbjct: 426 LELVPLGQDAHGMGPLGGLVRVPHHAHLLHR*WAR 530
Score = 159 bits (341), Expect = 2e-038
Identities = 71/92 (77%), Positives = 73/92 (79%)
Frame = -2 / +1
Query: 288 QTN*ATAGMSLSQASSGLPME*TMKPISLNFSGSMMLRPSKTKAGFCMLSKIFW*SRVLN 109
+ N*A AGMSLS ASSGLPME*TMKPISL+ S LRPSKTKAGFCML KIFW*S LN
Sbjct: 253 ERN*AIAGMSLSHASSGLPME*TMKPISLSLSALTTLRPSKTKAGFCMLLKIFW*SSSLN 432
Query: 108 SSHSVRMHTPWAPLVASYASHTQFTCLMAVGL 13
S HSVRMHT WAPLVASYASHT TC GL
Sbjct: 433 SFHSVRMHTAWAPLVASYASHTTLTCFTDDGL 528
>gb|AL510412.1|AL510412 AL510412 Hordeum vulgare Barke developing caryopsis (3.-15.DAP)
Hordeum vulgare subsp. vulgare cDNA clone HY04N13u 3',
mRNA sequence
Length = 668
Score = 195 bits (421), Expect = 1e-049
Identities = 75/91 (82%), Positives = 87/91 (95%)
Frame = +2 / -3
Query: 14 SPTAIKQVNCVWDAYEATKGAHGVCILTEWDEFKTLDYQKIFDNMQKPAFVFDGRNIIDP 193
SP+++KQV+ VWDAYEATKGAH VCILTEW+EFK LDYQKIF+NMQKPAFVFDGRN+++
Sbjct: 510 SPSSVKQVSVVWDAYEATKGAHAVCILTEWNEFKELDYQKIFNNMQKPAFVFDGRNVVNA 331
Query: 194 EKLREIGFIVYSIGKPLDAWLKDMPAVA*FV 286
+KLREIGFIVYSIGKPLDAWLKDMPA+A*F+
Sbjct: 330 DKLREIGFIVYSIGKPLDAWLKDMPAIA*FL 238
Score = 160 bits (343), Expect = 8e-039
Identities = 70/95 (73%), Positives = 79/95 (83%)
Frame = -1 / +1
Query: 295 STSDELSDRGHVLKPGVERLADGVDDEADLPQLLRVDDVAAVEDEGGLLHVVEDLLVVQG 116
S +EL DRGHVL+P +ERLADGVD+EA+LP+L+ VDDVA VEDEG LLHVVEDLLVVQ
Sbjct: 229 SCGEELGDRGHVLEPRIERLADGVDNEANLPELVGVDDVAPVEDEGRLLHVVEDLLVVQL 408
Query: 115 LELVPLGQDAHPVGALGGLVRVPHAVHLFNGRGAR 11
LELVPLGQDAH +G LGGLVRVPH HL + AR
Sbjct: 409 LELVPLGQDAHGMGPLGGLVRVPHHAHLLHR*WAR 513
Score = 159 bits (341), Expect = 2e-038
Identities = 71/92 (77%), Positives = 73/92 (79%)
Frame = -2 / +2
Query: 288 QTN*ATAGMSLSQASSGLPME*TMKPISLNFSGSMMLRPSKTKAGFCMLSKIFW*SRVLN 109
+ N*A AGMSLS ASSGLPME*TMKPISL+ S LRPSKTKAGFCML KIFW*S LN
Sbjct: 236 ERN*AIAGMSLSHASSGLPME*TMKPISLSLSALTTLRPSKTKAGFCMLLKIFW*SSSLN 415
Query: 108 SSHSVRMHTPWAPLVASYASHTQFTCLMAVGL 13
S HSVRMHT WAPLVASYASHT TC GL
Sbjct: 416 SFHSVRMHTAWAPLVASYASHTTLTCFTDDGL 511
>gb|BI958959.1|BI958959 HVSMEn0017G17f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0017G17f, mRNA sequence
Length = 633
Score = 195 bits (421), Expect = 1e-049
Identities = 75/91 (82%), Positives = 87/91 (95%)
Frame = +2 / +1
Query: 14 SPTAIKQVNCVWDAYEATKGAHGVCILTEWDEFKTLDYQKIFDNMQKPAFVFDGRNIIDP 193
SP+++KQV+ VWDAYEATKGAH VCILTEW+EFK LDYQKIF+NMQKPAFVFDGRN+++
Sbjct: 334 SPSSVKQVSVVWDAYEATKGAHAVCILTEWNEFKELDYQKIFNNMQKPAFVFDGRNVVNA 513
Query: 194 EKLREIGFIVYSIGKPLDAWLKDMPAVA*FV 286
+KLREIGFIVYSIGKPLDAWLKDMPA+A*F+
Sbjct: 514 DKLREIGFIVYSIGKPLDAWLKDMPAIA*FL 606
Score = 160 bits (343), Expect = 8e-039
Identities = 70/95 (73%), Positives = 79/95 (83%)
Frame = -1 / -1
Query: 295 STSDELSDRGHVLKPGVERLADGVDDEADLPQLLRVDDVAAVEDEGGLLHVVEDLLVVQG 116
S +EL DRGHVL+P +ERLADGVD+EA+LP+L+ VDDVA VEDEG LLHVVEDLLVVQ
Sbjct: 615 SCGEELGDRGHVLEPRIERLADGVDNEANLPELVGVDDVAPVEDEGRLLHVVEDLLVVQL 436
Query: 115 LELVPLGQDAHPVGALGGLVRVPHAVHLFNGRGAR 11
LELVPLGQDAH +G LGGLVRVPH HL + AR
Sbjct: 435 LELVPLGQDAHGMGPLGGLVRVPHHAHLLHR*WAR 331
Score = 159 bits (341), Expect = 2e-038
Identities = 71/92 (77%), Positives = 73/92 (79%)
Frame = -2 / -2
Query: 288 QTN*ATAGMSLSQASSGLPME*TMKPISLNFSGSMMLRPSKTKAGFCMLSKIFW*SRVLN 109
+ N*A AGMSLS ASSGLPME*TMKPISL+ S LRPSKTKAGFCML KIFW*S LN
Sbjct: 608 ERN*AIAGMSLSHASSGLPME*TMKPISLSLSALTTLRPSKTKAGFCMLLKIFW*SSSLN 429
Query: 108 SSHSVRMHTPWAPLVASYASHTQFTCLMAVGL 13
S HSVRMHT WAPLVASYASHT TC GL
Sbjct: 428 SFHSVRMHTAWAPLVASYASHTTLTCFTDDGL 333
>gb|BI959762.1|BI959762 HVSMEn0021F08f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0021F08f, mRNA sequence
Length = 644
Score = 195 bits (421), Expect = 1e-049
Identities = 75/91 (82%), Positives = 87/91 (95%)
Frame = +2 / +1
Query: 14 SPTAIKQVNCVWDAYEATKGAHGVCILTEWDEFKTLDYQKIFDNMQKPAFVFDGRNIIDP 193
SP+++KQV+ VWDAYEATKGAH VCILTEW+EFK LDYQKIF+NMQKPAFVFDGRN+++
Sbjct: 334 SPSSVKQVSVVWDAYEATKGAHAVCILTEWNEFKELDYQKIFNNMQKPAFVFDGRNVVNA 513
Query: 194 EKLREIGFIVYSIGKPLDAWLKDMPAVA*FV 286
+KLREIGFIVYSIGKPLDAWLKDMPA+A*F+
Sbjct: 514 DKLREIGFIVYSIGKPLDAWLKDMPAIA*FL 606
Score = 160 bits (343), Expect = 8e-039
Identities = 70/95 (73%), Positives = 79/95 (83%)
Frame = -1 / -3
Query: 295 STSDELSDRGHVLKPGVERLADGVDDEADLPQLLRVDDVAAVEDEGGLLHVVEDLLVVQG 116
S +EL DRGHVL+P +ERLADGVD+EA+LP+L+ VDDVA VEDEG LLHVVEDLLVVQ
Sbjct: 615 SCGEELGDRGHVLEPRIERLADGVDNEANLPELVGVDDVAPVEDEGRLLHVVEDLLVVQL 436
Query: 115 LELVPLGQDAHPVGALGGLVRVPHAVHLFNGRGAR 11
LELVPLGQDAH +G LGGLVRVPH HL + AR
Sbjct: 435 LELVPLGQDAHGMGPLGGLVRVPHHAHLLHR*WAR 331
Score = 159 bits (341), Expect = 2e-038
Identities = 71/92 (77%), Positives = 73/92 (79%)
Frame = -2 / -1
Query: 288 QTN*ATAGMSLSQASSGLPME*TMKPISLNFSGSMMLRPSKTKAGFCMLSKIFW*SRVLN 109
+ N*A AGMSLS ASSGLPME*TMKPISL+ S LRPSKTKAGFCML KIFW*S LN
Sbjct: 608 ERN*AIAGMSLSHASSGLPME*TMKPISLSLSALTTLRPSKTKAGFCMLLKIFW*SSSLN 429
Query: 108 SSHSVRMHTPWAPLVASYASHTQFTCLMAVGL 13
S HSVRMHT WAPLVASYASHT TC GL
Sbjct: 428 SFHSVRMHTAWAPLVASYASHTTLTCFTDDGL 333
>gb|AV918153.1|AV918153 AV918153 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags20a23 3', mRNA sequence
Length = 631
Score = 195 bits (421), Expect = 1e-049
Identities = 75/91 (82%), Positives = 87/91 (95%)
Frame = +2 / -2
Query: 14 SPTAIKQVNCVWDAYEATKGAHGVCILTEWDEFKTLDYQKIFDNMQKPAFVFDGRNIIDP 193
SP+++KQV+ VWDAYEATKGAH VCILTEW+EFK LDYQKIF+NMQKPAFVFDGRN+++
Sbjct: 480 SPSSVKQVSVVWDAYEATKGAHAVCILTEWNEFKELDYQKIFNNMQKPAFVFDGRNVVNA 301
Query: 194 EKLREIGFIVYSIGKPLDAWLKDMPAVA*FV 286
+KLREIGFIVYSIGKPLDAWLKDMPA+A*F+
Sbjct: 300 DKLREIGFIVYSIGKPLDAWLKDMPAIA*FL 208
Score = 160 bits (343), Expect = 8e-039
Identities = 70/95 (73%), Positives = 79/95 (83%)
Frame = -1 / +1
Query: 295 STSDELSDRGHVLKPGVERLADGVDDEADLPQLLRVDDVAAVEDEGGLLHVVEDLLVVQG 116
S +EL DRGHVL+P +ERLADGVD+EA+LP+L+ VDDVA VEDEG LLHVVEDLLVVQ
Sbjct: 199 SCGEELGDRGHVLEPRIERLADGVDNEANLPELVGVDDVAPVEDEGRLLHVVEDLLVVQL 378
Query: 115 LELVPLGQDAHPVGALGGLVRVPHAVHLFNGRGAR 11
LELVPLGQDAH +G LGGLVRVPH HL + AR
Sbjct: 379 LELVPLGQDAHGMGPLGGLVRVPHHAHLLHR*WAR 483
Score = 159 bits (341), Expect = 2e-038
Identities = 71/92 (77%), Positives = 73/92 (79%)
Frame = -2 / +2
Query: 288 QTN*ATAGMSLSQASSGLPME*TMKPISLNFSGSMMLRPSKTKAGFCMLSKIFW*SRVLN 109
+ N*A AGMSLS ASSGLPME*TMKPISL+ S LRPSKTKAGFCML KIFW*S LN
Sbjct: 206 ERN*AIAGMSLSHASSGLPME*TMKPISLSLSALTTLRPSKTKAGFCMLLKIFW*SSSLN 385
Query: 108 SSHSVRMHTPWAPLVASYASHTQFTCLMAVGL 13
S HSVRMHT WAPLVASYASHT TC GL
Sbjct: 386 SFHSVRMHTAWAPLVASYASHTTLTCFTDDGL 481
>gb|BM816403.1|BM816403 HC108H05_SK.ab1 HC Hordeum vulgare subsp. vulgare cDNA clone
HC108H05_SK.ab1 similar to Hydrogen
dehydrogenase,Phosphoglycerate dehydrogenase,Glucose
1-dehydrogenase,Hydrogenase,Cytochrome-c3
hydrogenase,GDP-mannose 6-dehydrogenase,UDP-glucose
6-dehydrogenase,Glycine dehydrogenase,Transferred entry:
1.18.99.1,, mRNA sequence
Length = 886
Score = 195 bits (421), Expect = 1e-049
Identities = 75/91 (82%), Positives = 87/91 (95%)
Frame = +2 / +2
Query: 14 SPTAIKQVNCVWDAYEATKGAHGVCILTEWDEFKTLDYQKIFDNMQKPAFVFDGRNIIDP 193
SP+++KQV+ VWDAYEATKGAH VCILTEW+EFK LDYQKIF+NMQKPAFVFDGRN+++
Sbjct: 395 SPSSVKQVSVVWDAYEATKGAHAVCILTEWNEFKELDYQKIFNNMQKPAFVFDGRNVVNA 574
Query: 194 EKLREIGFIVYSIGKPLDAWLKDMPAVA*FV 286
+KLREIGFIVYSIGKPLDAWLKDMPA+A*F+
Sbjct: 575 DKLREIGFIVYSIGKPLDAWLKDMPAIA*FL 667
Score = 160 bits (343), Expect = 8e-039
Identities = 70/95 (73%), Positives = 79/95 (83%)
Frame = -1 / -1
Query: 295 STSDELSDRGHVLKPGVERLADGVDDEADLPQLLRVDDVAAVEDEGGLLHVVEDLLVVQG 116
S +EL DRGHVL+P +ERLADGVD+EA+LP+L+ VDDVA VEDEG LLHVVEDLLVVQ
Sbjct: 676 SCGEELGDRGHVLEPRIERLADGVDNEANLPELVGVDDVAPVEDEGRLLHVVEDLLVVQL 497
Query: 115 LELVPLGQDAHPVGALGGLVRVPHAVHLFNGRGAR 11
LELVPLGQDAH +G LGGLVRVPH HL + AR
Sbjct: 496 LELVPLGQDAHGMGPLGGLVRVPHHAHLLHR*WAR 392
Score = 159 bits (341), Expect = 2e-038
Identities = 71/92 (77%), Positives = 73/92 (79%)
Frame = -2 / -2
Query: 288 QTN*ATAGMSLSQASSGLPME*TMKPISLNFSGSMMLRPSKTKAGFCMLSKIFW*SRVLN 109
+ N*A AGMSLS ASSGLPME*TMKPISL+ S LRPSKTKAGFCML KIFW*S LN
Sbjct: 669 ERN*AIAGMSLSHASSGLPME*TMKPISLSLSALTTLRPSKTKAGFCMLLKIFW*SSSLN 490
Query: 108 SSHSVRMHTPWAPLVASYASHTQFTCLMAVGL 13
S HSVRMHT WAPLVASYASHT TC GL
Sbjct: 489 SFHSVRMHTAWAPLVASYASHTTLTCFTDDGL 394
>gb|AJ432034.1|AJ432034 AJ432034 S00002 Hordeum vulgare subsp. vulgare cDNA clone
S0000200029E07F1, mRNA sequence
Length = 639
Score = 195 bits (421), Expect = 1e-049
Identities = 75/91 (82%), Positives = 87/91 (95%)
Frame = +2 / +3
Query: 14 SPTAIKQVNCVWDAYEATKGAHGVCILTEWDEFKTLDYQKIFDNMQKPAFVFDGRNIIDP 193
SP+++KQV+ VWDAYEATKGAH VCILTEW+EFK LDYQKIF+NMQKPAFVFDGRN+++
Sbjct: 123 SPSSVKQVSVVWDAYEATKGAHAVCILTEWNEFKELDYQKIFNNMQKPAFVFDGRNVVNA 302
Query: 194 EKLREIGFIVYSIGKPLDAWLKDMPAVA*FV 286
+KLREIGFIVYSIGKPLDAWLKDMPA+A*F+
Sbjct: 303 DKLREIGFIVYSIGKPLDAWLKDMPAIA*FL 395
Score = 160 bits (343), Expect = 8e-039
Identities = 70/95 (73%), Positives = 79/95 (83%)
Frame = -1 / -2
Query: 295 STSDELSDRGHVLKPGVERLADGVDDEADLPQLLRVDDVAAVEDEGGLLHVVEDLLVVQG 116
S +EL DRGHVL+P +ERLADGVD+EA+LP+L+ VDDVA VEDEG LLHVVEDLLVVQ
Sbjct: 404 SCGEELGDRGHVLEPRIERLADGVDNEANLPELVGVDDVAPVEDEGRLLHVVEDLLVVQL 225
Query: 115 LELVPLGQDAHPVGALGGLVRVPHAVHLFNGRGAR 11
LELVPLGQDAH +G LGGLVRVPH HL + AR
Sbjct: 224 LELVPLGQDAHGMGPLGGLVRVPHHAHLLHR*WAR 120
Score = 159 bits (341), Expect = 2e-038
Identities = 71/92 (77%), Positives = 73/92 (79%)
Frame = -2 / -3
Query: 288 QTN*ATAGMSLSQASSGLPME*TMKPISLNFSGSMMLRPSKTKAGFCMLSKIFW*SRVLN 109
+ N*A AGMSLS ASSGLPME*TMKPISL+ S LRPSKTKAGFCML KIFW*S LN
Sbjct: 397 ERN*AIAGMSLSHASSGLPME*TMKPISLSLSALTTLRPSKTKAGFCMLLKIFW*SSSLN 218
Query: 108 SSHSVRMHTPWAPLVASYASHTQFTCLMAVGL 13
S HSVRMHT WAPLVASYASHT TC GL
Sbjct: 217 SFHSVRMHTAWAPLVASYASHTTLTCFTDDGL 122
>gb|BJ466653.1|BJ466653 BJ466653 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags33e10 3', mRNA sequence
Length = 650
Score = 195 bits (421), Expect = 1e-049
Identities = 75/91 (82%), Positives = 87/91 (95%)
Frame = +2 / -2
Query: 14 SPTAIKQVNCVWDAYEATKGAHGVCILTEWDEFKTLDYQKIFDNMQKPAFVFDGRNIIDP 193
SP+++KQV+ VWDAYEATKGAH VCILTEW+EFK LDYQKIF+NMQKPAFVFDGRN+++
Sbjct: 481 SPSSVKQVSVVWDAYEATKGAHAVCILTEWNEFKELDYQKIFNNMQKPAFVFDGRNVVNA 302
Query: 194 EKLREIGFIVYSIGKPLDAWLKDMPAVA*FV 286
+KLREIGFIVYSIGKPLDAWLKDMPA+A*F+
Sbjct: 301 DKLREIGFIVYSIGKPLDAWLKDMPAIA*FL 209
Score = 160 bits (343), Expect = 8e-039
Identities = 70/95 (73%), Positives = 79/95 (83%)
Frame = -1 / +2
Query: 295 STSDELSDRGHVLKPGVERLADGVDDEADLPQLLRVDDVAAVEDEGGLLHVVEDLLVVQG 116
S +EL DRGHVL+P +ERLADGVD+EA+LP+L+ VDDVA VEDEG LLHVVEDLLVVQ
Sbjct: 200 SCGEELGDRGHVLEPRIERLADGVDNEANLPELVGVDDVAPVEDEGRLLHVVEDLLVVQL 379
Query: 115 LELVPLGQDAHPVGALGGLVRVPHAVHLFNGRGAR 11
LELVPLGQDAH +G LGGLVRVPH HL + AR
Sbjct: 380 LELVPLGQDAHGMGPLGGLVRVPHHAHLLHR*WAR 484
Score = 159 bits (341), Expect = 2e-038
Identities = 71/92 (77%), Positives = 73/92 (79%)
Frame = -2 / +3
Query: 288 QTN*ATAGMSLSQASSGLPME*TMKPISLNFSGSMMLRPSKTKAGFCMLSKIFW*SRVLN 109
+ N*A AGMSLS ASSGLPME*TMKPISL+ S LRPSKTKAGFCML KIFW*S LN
Sbjct: 207 ERN*AIAGMSLSHASSGLPME*TMKPISLSLSALTTLRPSKTKAGFCMLLKIFW*SSSLN 386
Query: 108 SSHSVRMHTPWAPLVASYASHTQFTCLMAVGL 13
S HSVRMHT WAPLVASYASHT TC GL
Sbjct: 387 SFHSVRMHTAWAPLVASYASHTTLTCFTDDGL 482
>gb|BJ467967.1|BJ467967 BJ467967 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags30i06 3', mRNA sequence
Length = 661
Score = 195 bits (421), Expect = 1e-049
Identities = 75/91 (82%), Positives = 87/91 (95%)
Frame = +2 / -1
Query: 14 SPTAIKQVNCVWDAYEATKGAHGVCILTEWDEFKTLDYQKIFDNMQKPAFVFDGRNIIDP 193
SP+++KQV+ VWDAYEATKGAH VCILTEW+EFK LDYQKIF+NMQKPAFVFDGRN+++
Sbjct: 490 SPSSVKQVSVVWDAYEATKGAHAVCILTEWNEFKELDYQKIFNNMQKPAFVFDGRNVVNA 311
Query: 194 EKLREIGFIVYSIGKPLDAWLKDMPAVA*FV 286
+KLREIGFIVYSIGKPLDAWLKDMPA+A*F+
Sbjct: 310 DKLREIGFIVYSIGKPLDAWLKDMPAIA*FL 218
Score = 160 bits (343), Expect = 8e-039
Identities = 70/95 (73%), Positives = 79/95 (83%)
Frame = -1 / +2
Query: 295 STSDELSDRGHVLKPGVERLADGVDDEADLPQLLRVDDVAAVEDEGGLLHVVEDLLVVQG 116
S +EL DRGHVL+P +ERLADGVD+EA+LP+L+ VDDVA VEDEG LLHVVEDLLVVQ
Sbjct: 209 SCGEELGDRGHVLEPRIERLADGVDNEANLPELVGVDDVAPVEDEGRLLHVVEDLLVVQL 388
Query: 115 LELVPLGQDAHPVGALGGLVRVPHAVHLFNGRGAR 11
LELVPLGQDAH +G LGGLVRVPH HL + AR
Sbjct: 389 LELVPLGQDAHGMGPLGGLVRVPHHAHLLHR*WAR 493
Score = 159 bits (341), Expect = 2e-038
Identities = 71/92 (77%), Positives = 73/92 (79%)
Frame = -2 / +3
Query: 288 QTN*ATAGMSLSQASSGLPME*TMKPISLNFSGSMMLRPSKTKAGFCMLSKIFW*SRVLN 109
+ N*A AGMSLS ASSGLPME*TMKPISL+ S LRPSKTKAGFCML KIFW*S LN
Sbjct: 216 ERN*AIAGMSLSHASSGLPME*TMKPISLSLSALTTLRPSKTKAGFCMLLKIFW*SSSLN 395
Query: 108 SSHSVRMHTPWAPLVASYASHTQFTCLMAVGL 13
S HSVRMHT WAPLVASYASHT TC GL
Sbjct: 396 SFHSVRMHTAWAPLVASYASHTTLTCFTDDGL 491
>gb|BQ768409.1|BQ768409 EBro08_SQ011_K14_R root, 3 week, drought-stressed, cv Optic, EBro08
Hordeum vulgare subsp. vulgare cDNA clone
EBro08_SQ011_K14 5', mRNA sequence
Length = 610
Score = 195 bits (421), Expect = 1e-049
Identities = 75/91 (82%), Positives = 87/91 (95%)
Frame = +2 / +1
Query: 14 SPTAIKQVNCVWDAYEATKGAHGVCILTEWDEFKTLDYQKIFDNMQKPAFVFDGRNIIDP 193
SP+++KQV+ VWDAYEATKGAH VCILTEW+EFK LDYQKIF+NMQKPAFVFDGRN+++
Sbjct: 247 SPSSVKQVSVVWDAYEATKGAHAVCILTEWNEFKELDYQKIFNNMQKPAFVFDGRNVVNA 426
Query: 194 EKLREIGFIVYSIGKPLDAWLKDMPAVA*FV 286
+KLREIGFIVYSIGKPLDAWLKDMPA+A*F+
Sbjct: 427 DKLREIGFIVYSIGKPLDAWLKDMPAIA*FL 519
Score = 160 bits (343), Expect = 8e-039
Identities = 70/95 (73%), Positives = 79/95 (83%)
Frame = -1 / -2
Query: 295 STSDELSDRGHVLKPGVERLADGVDDEADLPQLLRVDDVAAVEDEGGLLHVVEDLLVVQG 116
S +EL DRGHVL+P +ERLADGVD+EA+LP+L+ VDDVA VEDEG LLHVVEDLLVVQ
Sbjct: 528 SCGEELGDRGHVLEPRIERLADGVDNEANLPELVGVDDVAPVEDEGRLLHVVEDLLVVQL 349
Query: 115 LELVPLGQDAHPVGALGGLVRVPHAVHLFNGRGAR 11
LELVPLGQDAH +G LGGLVRVPH HL + AR
Sbjct: 348 LELVPLGQDAHGMGPLGGLVRVPHHAHLLHR*WAR 244
Score = 159 bits (341), Expect = 2e-038
Identities = 71/92 (77%), Positives = 73/92 (79%)
Frame = -2 / -3
Query: 288 QTN*ATAGMSLSQASSGLPME*TMKPISLNFSGSMMLRPSKTKAGFCMLSKIFW*SRVLN 109
+ N*A AGMSLS ASSGLPME*TMKPISL+ S LRPSKTKAGFCML KIFW*S LN
Sbjct: 521 ERN*AIAGMSLSHASSGLPME*TMKPISLSLSALTTLRPSKTKAGFCMLLKIFW*SSSLN 342
Query: 108 SSHSVRMHTPWAPLVASYASHTQFTCLMAVGL 13
S HSVRMHT WAPLVASYASHT TC GL
Sbjct: 341 SFHSVRMHTAWAPLVASYASHTTLTCFTDDGL 246
>gb|BQ762433.1|BQ762433 EBro01_SQ005_H19_R root, 3 week, hydroponic grown, no treatment, cv
Optic, EBro01 Hordeum vulgare subsp. vulgare cDNA clone
EBro01_SQ005_H19 5', mRNA sequence
Length = 528
Score = 194 bits (419), Expect = 3e-049
Identities = 76/87 (87%), Positives = 83/87 (95%)
Frame = +2 / +3
Query: 23 AIKQVNCVWDAYEATKGAHGVCILTEWDEFKTLDYQKIFDNMQKPAFVFDGRNIIDPEKL 202
A+KQV+ VWDAYEATKGAH VCILTEW+EFK+LDY+KIFDNMQKPAFVFDGRN++D EKL
Sbjct: 3 AVKQVSVVWDAYEATKGAHAVCILTEWNEFKSLDYKKIFDNMQKPAFVFDGRNVVDAEKL 182
Query: 203 REIGFIVYSIGKPLDAWLKDMPAVA*F 283
REIGFIVYSIGKPLD WLKDMPAVA*F
Sbjct: 183 REIGFIVYSIGKPLDGWLKDMPAVA*F 263
Score = 168 bits (362), Expect = 2e-041
Identities = 73/87 (83%), Positives = 77/87 (88%)
Frame = -1 / -2
Query: 283 ELSDRGHVLKPGVERLADGVDDEADLPQLLRVDDVAAVEDEGGLLHVVEDLLVVQGLELV 104
EL D GHVL+P VERLADGVDDEADLP+LL VDDVAAVEDEG LLHVVEDLLVVQ LELV
Sbjct: 263 ELGDGGHVLEPPVERLADGVDDEADLPELLGVDDVAAVEDEGRLLHVVEDLLVVQRLELV 84
Query: 103 PLGQDAHPVGALGGLVRVPHAVHLFNG 23
PLG+DAH VGALGGLVRVPH HL +G
Sbjct: 83 PLGEDAHGVGALGGLVRVPHHAHLLHG 3
Score = 160 bits (345), Expect = 4e-039
Identities = 72/89 (80%), Positives = 74/89 (83%)
Frame = -2 / -3
Query: 288 QTN*ATAGMSLSQASSGLPME*TMKPISLNFSGSMMLRPSKTKAGFCMLSKIFW*SRVLN 109
+ N*ATAGMSLS SSGLPME*TMKPISL+FS S LRPSKTKAGFCMLSKIF *S LN
Sbjct: 268 RAN*ATAGMSLSHPSSGLPME*TMKPISLSFSASTTLRPSKTKAGFCMLSKIFL*SSDLN 89
Query: 108 SSHSVRMHTPWAPLVASYASHTQFTCLMA 22
S HSVRMHT WAPLVASYASHT TC A
Sbjct: 88 SFHSVRMHTAWAPLVASYASHTTLTCFTA 2
>gb|AV915524.1|AV915524 AV915524 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags14o14 5', mRNA sequence
Length = 621
Score = 193 bits (416), Expect = 7e-049
Identities = 74/85 (87%), Positives = 81/85 (95%)
Frame = +2 / +3
Query: 14 SPTAIKQVNCVWDAYEATKGAHGVCILTEWDEFKTLDYQKIFDNMQKPAFVFDGRNIIDP 193
SPTA+KQV+ VWDAYEATKGAH VCILTEW+EFK+LDY+KIFDNMQKPAFVFDGRN++D
Sbjct: 348 SPTAVKQVSVVWDAYEATKGAHAVCILTEWNEFKSLDYKKIFDNMQKPAFVFDGRNVVDA 527
Query: 194 EKLREIGFIVYSIGKPLDAWLKDMP 268
EKLREIGFIVYSIGKPLD WLKDMP
Sbjct: 528 EKLREIGFIVYSIGKPLDGWLKDMP 602
Score = 171 bits (369), Expect = 2e-042
Identities = 74/86 (86%), Positives = 78/86 (90%)
Frame = -1 / -2
Query: 268 GHVLKPGVERLADGVDDEADLPQLLRVDDVAAVEDEGGLLHVVEDLLVVQGLELVPLGQD 89
GHVL+P VERLADGVDDEADLP+LL VDDVAAVEDEG LLHVVEDLLVVQ LELVPLG+D
Sbjct: 602 GHVLEPPVERLADGVDDEADLPELLGVDDVAAVEDEGRLLHVVEDLLVVQRLELVPLGED 423
Query: 88 AHPVGALGGLVRVPHAVHLFNGRGAR 11
AH VGALGGLVRVPH HL +GRGAR
Sbjct: 422 AHGVGALGGLVRVPHHAHLLHGRGAR 345
Score = 157 bits (338), Expect = 4e-038
Identities = 70/85 (82%), Positives = 71/85 (83%)
Frame = -2 / -3
Query: 267 GMSLSQASSGLPME*TMKPISLNFSGSMMLRPSKTKAGFCMLSKIFW*SRVLNSSHSVRM 88
GMSLS SSGLPME*TMKPISL+FS S LRPSKTKAGFCMLSKIF *S LNS HSVRM
Sbjct: 601 GMSLSHPSSGLPME*TMKPISLSFSASTTLRPSKTKAGFCMLSKIFL*SSDLNSFHSVRM 422
Query: 87 HTPWAPLVASYASHTQFTCLMAVGL 13
HT WAPLVASYASHT TC AVGL
Sbjct: 421 HTAWAPLVASYASHTTLTCFTAVGL 347
>gb|BF257421.2|BF257421 HVSMEf0012N20f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEf0012N20f, mRNA sequence
Length = 538
Score = 192 bits (414), Expect = 1e-048
Identities = 74/89 (83%), Positives = 82/89 (92%)
Frame = +2 / +3
Query: 14 SPTAIKQVNCVWDAYEATKGAHGVCILTEWDEFKTLDYQKIFDNMQKPAFVFDGRNIIDP 193
SPT KQV+ WDAYEATK AHG+CI+TEWDEFKTLDY+KI+D+MQKPAFVFDGRN++D
Sbjct: 111 SPTTTKQVSVTWDAYEATKDAHGICIMTEWDEFKTLDYKKIYDSMQKPAFVFDGRNVVDS 290
Query: 194 EKLREIGFIVYSIGKPLDAWLKDMPAVA* 280
EKLREIGFIVYSIGKPLD WLKDMPAVA*
Sbjct: 291 EKLREIGFIVYSIGKPLDGWLKDMPAVA* 377
Score = 150 bits (322), Expect = 7e-036
Identities = 70/89 (78%), Positives = 72/89 (80%)
Frame = -2 / -1
Query: 279 *ATAGMSLSQASSGLPME*TMKPISLNFSGSMMLRPSKTKAGFCMLSKIFW*SRVLNSSH 100
*ATAGMSLSQ SSGLPME*TM PISL+FS S LRPSKTKAGFCMLS IF *SRVLNSSH
Sbjct: 376 *ATAGMSLSQPSSGLPME*TMNPISLSFSESTTLRPSKTKAGFCMLS*IFL*SRVLNSSH 197
Query: 99 SVRMHTPWAPLVASYASHTQFTCLMAVGL 13
SV M PWA LVASYAS TC + VGL
Sbjct: 196 SVMMQMPWASLVASYASQVTETCFVVVGL 110
Score = 105 bits (225), Expect = 2e-022
Identities = 44/78 (56%), Positives = 62/78 (79%)
Frame = -1 / -3
Query: 280 LSDRGHVLKPGVERLADGVDDEADLPQLLRVDDVAAVEDEGGLLHVVEDLLVVQGLELVP 101
LS HVL+P VE LA+GVD+E++ P+LLRV+++AA++++G LLH V DLLVV+ LEL+P
Sbjct: 377 LSHSRHVLEPTVEWLANGVDNESNFPELLRVNNIAAIKNKGRLLHAVIDLLVVKSLELIP 198
Query: 100 LGQDAHPVGALGGLVRVP 47
L DA +G LG L+R+P
Sbjct: 197 LSHDADAMGILGRLIRIP 144
>gb|AV917477.1|AV917477 AV917477 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags10b05 3', mRNA sequence
Length = 626
Score = 192 bits (414), Expect = 1e-048
Identities = 74/91 (81%), Positives = 86/91 (94%)
Frame = +2 / -2
Query: 14 SPTAIKQVNCVWDAYEATKGAHGVCILTEWDEFKTLDYQKIFDNMQKPAFVFDGRNIIDP 193
SP+++KQV+ VW AYEATKGAH VCILTEW+EFK LDYQKIF+NMQKPAFVFDGRN+++
Sbjct: 589 SPSSVKQVSVVWXAYEATKGAHAVCILTEWNEFKELDYQKIFNNMQKPAFVFDGRNVVNA 410
Query: 194 EKLREIGFIVYSIGKPLDAWLKDMPAVA*FV 286
+KLREIGFIVYSIGKPLDAWLKDMPA+A*F+
Sbjct: 409 DKLREIGFIVYSIGKPLDAWLKDMPAIA*FL 317
Score = 160 bits (343), Expect = 8e-039
Identities = 70/95 (73%), Positives = 79/95 (83%)
Frame = -1 / +2
Query: 295 STSDELSDRGHVLKPGVERLADGVDDEADLPQLLRVDDVAAVEDEGGLLHVVEDLLVVQG 116
S +EL DRGHVL+P +ERLADGVD+EA+LP+L+ VDDVA VEDEG LLHVVEDLLVVQ
Sbjct: 308 SCGEELGDRGHVLEPRIERLADGVDNEANLPELVGVDDVAPVEDEGRLLHVVEDLLVVQL 487
Query: 115 LELVPLGQDAHPVGALGGLVRVPHAVHLFNGRGAR 11
LELVPLGQDAH +G LGGLVRVPH HL + AR
Sbjct: 488 LELVPLGQDAHGMGPLGGLVRVPHHAHLLHR*WAR 592
Score = 157 bits (337), Expect = 6e-038
Identities = 70/92 (76%), Positives = 72/92 (78%)
Frame = -2 / +3
Query: 288 QTN*ATAGMSLSQASSGLPME*TMKPISLNFSGSMMLRPSKTKAGFCMLSKIFW*SRVLN 109
+ N*A AGMSLS ASSGLPME*TMKPISL+ S LRPSKTKAGFCML KIFW*S LN
Sbjct: 315 ERN*AIAGMSLSHASSGLPME*TMKPISLSLSALTTLRPSKTKAGFCMLLKIFW*SSSLN 494
Query: 108 SSHSVRMHTPWAPLVASYASHTQFTCLMAVGL 13
S HSVRMHT WAPLVASYA HT TC GL
Sbjct: 495 SFHSVRMHTAWAPLVASYAXHTTLTCFTDDGL 590
>gb|AV920851.1|AV920851 AV920851 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags15n06 3', mRNA sequence
Length = 659
Score = 192 bits (414), Expect = 1e-048
Identities = 74/89 (83%), Positives = 82/89 (92%)
Frame = +2 / -2
Query: 14 SPTAIKQVNCVWDAYEATKGAHGVCILTEWDEFKTLDYQKIFDNMQKPAFVFDGRNIIDP 193
SPT KQV+ WDAYEATK AHG+CI+TEWDEFKTLDY+KI+D+MQKPAFVFDGRN++D
Sbjct: 553 SPTTTKQVSVTWDAYEATKDAHGICIMTEWDEFKTLDYKKIYDSMQKPAFVFDGRNVVDS 374
Query: 194 EKLREIGFIVYSIGKPLDAWLKDMPAVA* 280
EKLREIGFIVYSIGKPLD WLKDMPAVA*
Sbjct: 373 EKLREIGFIVYSIGKPLDGWLKDMPAVA* 287
Score = 150 bits (322), Expect = 7e-036
Identities = 70/89 (78%), Positives = 72/89 (80%)
Frame = -2 / +3
Query: 279 *ATAGMSLSQASSGLPME*TMKPISLNFSGSMMLRPSKTKAGFCMLSKIFW*SRVLNSSH 100
*ATAGMSLSQ SSGLPME*TM PISL+FS S LRPSKTKAGFCMLS IF *SRVLNSSH
Sbjct: 288 *ATAGMSLSQPSSGLPME*TMNPISLSFSESTTLRPSKTKAGFCMLS*IFL*SRVLNSSH 467
Query: 99 SVRMHTPWAPLVASYASHTQFTCLMAVGL 13
SV M PWA LVASYAS TC + VGL
Sbjct: 468 SVMMQMPWASLVASYASQVTETCFVVVGL 554
Score = 105 bits (225), Expect = 2e-022
Identities = 44/78 (56%), Positives = 62/78 (79%)
Frame = -1 / +2
Query: 280 LSDRGHVLKPGVERLADGVDDEADLPQLLRVDDVAAVEDEGGLLHVVEDLLVVQGLELVP 101
LS HVL+P VE LA+GVD+E++ P+LLRV+++AA++++G LLH V DLLVV+ LEL+P
Sbjct: 287 LSHSRHVLEPTVEWLANGVDNESNFPELLRVNNIAAIKNKGRLLHAVIDLLVVKSLELIP 466
Query: 100 LGQDAHPVGALGGLVRVP 47
L DA +G LG L+R+P
Sbjct: 467 LSHDADAMGILGRLIRIP 520
>gb|AV921149.1|AV921149 AV921149 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags1d01 3', mRNA sequence
Length = 563
Score = 192 bits (414), Expect = 1e-048
Identities = 74/89 (83%), Positives = 82/89 (92%)
Frame = +2 / -3
Query: 14 SPTAIKQVNCVWDAYEATKGAHGVCILTEWDEFKTLDYQKIFDNMQKPAFVFDGRNIIDP 193
SPT KQV+ WDAYEATK AHG+CI+TEWDEFKTLDY+KI+D+MQKPAFVFDGRN++D
Sbjct: 462 SPTTTKQVSVTWDAYEATKDAHGICIMTEWDEFKTLDYKKIYDSMQKPAFVFDGRNVVDS 283
Query: 194 EKLREIGFIVYSIGKPLDAWLKDMPAVA* 280
EKLREIGFIVYSIGKPLD WLKDMPAVA*
Sbjct: 282 EKLREIGFIVYSIGKPLDGWLKDMPAVA* 196
Score = 150 bits (322), Expect = 7e-036
Identities = 70/89 (78%), Positives = 72/89 (80%)
Frame = -2 / +2
Query: 279 *ATAGMSLSQASSGLPME*TMKPISLNFSGSMMLRPSKTKAGFCMLSKIFW*SRVLNSSH 100
*ATAGMSLSQ SSGLPME*TM PISL+FS S LRPSKTKAGFCMLS IF *SRVLNSSH
Sbjct: 197 *ATAGMSLSQPSSGLPME*TMNPISLSFSESTTLRPSKTKAGFCMLS*IFL*SRVLNSSH 376
Query: 99 SVRMHTPWAPLVASYASHTQFTCLMAVGL 13
SV M PWA LVASYAS TC + VGL
Sbjct: 377 SVMMQMPWASLVASYASQVTETCFVVVGL 463
Score = 105 bits (225), Expect = 2e-022
Identities = 44/78 (56%), Positives = 62/78 (79%)
Frame = -1 / +1
Query: 280 LSDRGHVLKPGVERLADGVDDEADLPQLLRVDDVAAVEDEGGLLHVVEDLLVVQGLELVP 101
LS HVL+P VE LA+GVD+E++ P+LLRV+++AA++++G LLH V DLLVV+ LEL+P
Sbjct: 196 LSHSRHVLEPTVEWLANGVDNESNFPELLRVNNIAAIKNKGRLLHAVIDLLVVKSLELIP 375
Query: 100 LGQDAHPVGALGGLVRVP 47
L DA +G LG L+R+P
Sbjct: 376 LSHDADAMGILGRLIRIP 429
>gb|AV921164.1|AV921164 AV921164 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags1d19 3', mRNA sequence
Length = 583
Score = 192 bits (414), Expect = 1e-048
Identities = 74/89 (83%), Positives = 82/89 (92%)
Frame = +2 / -3
Query: 14 SPTAIKQVNCVWDAYEATKGAHGVCILTEWDEFKTLDYQKIFDNMQKPAFVFDGRNIIDP 193
SPT KQV+ WDAYEATK AHG+CI+TEWDEFKTLDY+KI+D+MQKPAFVFDGRN++D
Sbjct: 464 SPTTTKQVSVTWDAYEATKDAHGICIMTEWDEFKTLDYKKIYDSMQKPAFVFDGRNVVDS 285
Query: 194 EKLREIGFIVYSIGKPLDAWLKDMPAVA* 280
EKLREIGFIVYSIGKPLD WLKDMPAVA*
Sbjct: 284 EKLREIGFIVYSIGKPLDGWLKDMPAVA* 198
Score = 150 bits (322), Expect = 7e-036
Identities = 70/89 (78%), Positives = 72/89 (80%)
Frame = -2 / +1
Query: 279 *ATAGMSLSQASSGLPME*TMKPISLNFSGSMMLRPSKTKAGFCMLSKIFW*SRVLNSSH 100
*ATAGMSLSQ SSGLPME*TM PISL+FS S LRPSKTKAGFCMLS IF *SRVLNSSH
Sbjct: 199 *ATAGMSLSQPSSGLPME*TMNPISLSFSESTTLRPSKTKAGFCMLS*IFL*SRVLNSSH 378
Query: 99 SVRMHTPWAPLVASYASHTQFTCLMAVGL 13
SV M PWA LVASYAS TC + VGL
Sbjct: 379 SVMMQMPWASLVASYASQVTETCFVVVGL 465
Score = 105 bits (225), Expect = 2e-022
Identities = 44/78 (56%), Positives = 62/78 (79%)
Frame = -1 / +3
Query: 280 LSDRGHVLKPGVERLADGVDDEADLPQLLRVDDVAAVEDEGGLLHVVEDLLVVQGLELVP 101
LS HVL+P VE LA+GVD+E++ P+LLRV+++AA++++G LLH V DLLVV+ LEL+P
Sbjct: 198 LSHSRHVLEPTVEWLANGVDNESNFPELLRVNNIAAIKNKGRLLHAVIDLLVVKSLELIP 377
Query: 100 LGQDAHPVGALGGLVRVP 47
L DA +G LG L+R+P
Sbjct: 378 LSHDADAMGILGRLIRIP 431
>gb|BJ467846.1|BJ467846 BJ467846 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags30a15 3', mRNA sequence
Length = 671
Score = 192 bits (414), Expect = 1e-048
Identities = 74/89 (83%), Positives = 82/89 (92%)
Frame = +2 / -3
Query: 14 SPTAIKQVNCVWDAYEATKGAHGVCILTEWDEFKTLDYQKIFDNMQKPAFVFDGRNIIDP 193
SPT KQV+ WDAYEATK AHG+CI+TEWDEFKTLDY+KI+D+MQKPAFVFDGRN++D
Sbjct: 525 SPTTTKQVSVTWDAYEATKDAHGICIMTEWDEFKTLDYKKIYDSMQKPAFVFDGRNVVDS 346
Query: 194 EKLREIGFIVYSIGKPLDAWLKDMPAVA* 280
EKLREIGFIVYSIGKPLD WLKDMPAVA*
Sbjct: 345 EKLREIGFIVYSIGKPLDGWLKDMPAVA* 259
Score = 150 bits (322), Expect = 7e-036
Identities = 70/89 (78%), Positives = 72/89 (80%)
Frame = -2 / +2
Query: 279 *ATAGMSLSQASSGLPME*TMKPISLNFSGSMMLRPSKTKAGFCMLSKIFW*SRVLNSSH 100
*ATAGMSLSQ SSGLPME*TM PISL+FS S LRPSKTKAGFCMLS IF *SRVLNSSH
Sbjct: 260 *ATAGMSLSQPSSGLPME*TMNPISLSFSESTTLRPSKTKAGFCMLS*IFL*SRVLNSSH 439
Query: 99 SVRMHTPWAPLVASYASHTQFTCLMAVGL 13
SV M PWA LVASYAS TC + VGL
Sbjct: 440 SVMMQMPWASLVASYASQVTETCFVVVGL 526
Score = 105 bits (225), Expect = 2e-022
Identities = 44/78 (56%), Positives = 62/78 (79%)
Frame = -1 / +1
Query: 280 LSDRGHVLKPGVERLADGVDDEADLPQLLRVDDVAAVEDEGGLLHVVEDLLVVQGLELVP 101
LS HVL+P VE LA+GVD+E++ P+LLRV+++AA++++G LLH V DLLVV+ LEL+P
Sbjct: 259 LSHSRHVLEPTVEWLANGVDNESNFPELLRVNNIAAIKNKGRLLHAVIDLLVVKSLELIP 438
Query: 100 LGQDAHPVGALGGLVRVP 47
L DA +G LG L+R+P
Sbjct: 439 LSHDADAMGILGRLIRIP 492
>gb|CV054745.1|CV054745 BNEL112h10 Barley EST endosperm library Hordeum vulgare subsp.
vulgare cDNA clone BNEL112h10 5' similar to Colocasia
esculenta UDP-glucose dehydrogenase, mRNA sequence
Length = 600
Score = 192 bits (414), Expect = 1e-048
Identities = 74/89 (83%), Positives = 82/89 (92%)
Frame = +2 / +2
Query: 14 SPTAIKQVNCVWDAYEATKGAHGVCILTEWDEFKTLDYQKIFDNMQKPAFVFDGRNIIDP 193
SPT KQV+ WDAYEATK AHG+CI+TEWDEFKTLDY+KI+D+MQKPAFVFDGRN++D
Sbjct: 287 SPTTTKQVSVTWDAYEATKDAHGICIMTEWDEFKTLDYKKIYDSMQKPAFVFDGRNVVDS 466
Query: 194 EKLREIGFIVYSIGKPLDAWLKDMPAVA* 280
EKLREIGFIVYSIGKPLD WLKDMPAVA*
Sbjct: 467 EKLREIGFIVYSIGKPLDGWLKDMPAVA* 553
Score = 150 bits (322), Expect = 7e-036
Identities = 70/89 (78%), Positives = 72/89 (80%)
Frame = -2 / -1
Query: 279 *ATAGMSLSQASSGLPME*TMKPISLNFSGSMMLRPSKTKAGFCMLSKIFW*SRVLNSSH 100
*ATAGMSLSQ SSGLPME*TM PISL+FS S LRPSKTKAGFCMLS IF *SRVLNSSH
Sbjct: 552 *ATAGMSLSQPSSGLPME*TMNPISLSFSESTTLRPSKTKAGFCMLS*IFL*SRVLNSSH 373
Query: 99 SVRMHTPWAPLVASYASHTQFTCLMAVGL 13
SV M PWA LVASYAS TC + VGL
Sbjct: 372 SVMMQMPWASLVASYASQVTETCFVVVGL 286
Score = 105 bits (225), Expect = 2e-022
Identities = 44/78 (56%), Positives = 62/78 (79%)
Frame = -1 / -3
Query: 280 LSDRGHVLKPGVERLADGVDDEADLPQLLRVDDVAAVEDEGGLLHVVEDLLVVQGLELVP 101
LS HVL+P VE LA+GVD+E++ P+LLRV+++AA++++G LLH V DLLVV+ LEL+P
Sbjct: 553 LSHSRHVLEPTVEWLANGVDNESNFPELLRVNNIAAIKNKGRLLHAVIDLLVVKSLELIP 374
Query: 100 LGQDAHPVGALGGLVRVP 47
L DA +G LG L+R+P
Sbjct: 373 LSHDADAMGILGRLIRIP 320
>gb|BI958137.1|BI958137 HVSMEn0013J09f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0013J09f, mRNA sequence
Length = 884
Score = 192 bits (413), Expect = 2e-048
Identities = 74/91 (81%), Positives = 85/91 (93%)
Frame = +2 / -2
Query: 14 SPTAIKQVNCVWDAYEATKGAHGVCILTEWDEFKTLDYQKIFDNMQKPAFVFDGRNIIDP 193
SP+ + QV+ VWDAYEATKGAH VCILTEW+EFK LDYQKIF+NMQKPAFVFDGRN+++
Sbjct: 514 SPSFVNQVSVVWDAYEATKGAHAVCILTEWNEFKELDYQKIFNNMQKPAFVFDGRNVVNA 335
Query: 194 EKLREIGFIVYSIGKPLDAWLKDMPAVA*FV 286
+KLREIGFIVYSIGKPLDAWLKDMPA+A*F+
Sbjct: 334 DKLREIGFIVYSIGKPLDAWLKDMPAIA*FL 242
Score = 158 bits (340), Expect = 2e-038
Identities = 70/95 (73%), Positives = 79/95 (83%)
Frame = -1 / +2
Query: 295 STSDELSDRGHVLKPGVERLADGVDDEADLPQLLRVDDVAAVEDEGGLLHVVEDLLVVQG 116
S +EL DRGHVL+P +ERLADGVD+EA+LP+L+ VDDVA VEDEG LLHVVEDLLVVQ
Sbjct: 233 SCGEELGDRGHVLEPRIERLADGVDNEANLPELVGVDDVAPVEDEGRLLHVVEDLLVVQL 412
Query: 115 LELVPLGQDAHPVGALGGLVRVPHAVHLFNGRGAR 11
LELVPLGQDAH +G LGGLVRVPH +L N AR
Sbjct: 413 LELVPLGQDAHGMGPLGGLVRVPHHANLVNK*WAR 517
Score = 154 bits (331), Expect = 4e-037
Identities = 70/92 (76%), Positives = 73/92 (79%)
Frame = -2 / +3
Query: 288 QTN*ATAGMSLSQASSGLPME*TMKPISLNFSGSMMLRPSKTKAGFCMLSKIFW*SRVLN 109
+ N*A AGMSLS ASSGLPME*TMKPISL+ S LRPSKTKAGFCML KIFW*S LN
Sbjct: 240 ERN*AIAGMSLSHASSGLPME*TMKPISLSLSALTTLRPSKTKAGFCMLLKIFW*SSSLN 419
Query: 108 SSHSVRMHTPWAPLVASYASHTQFTCLMAVGL 13
S HSV+MHT WAPLVASYASHT T L GL
Sbjct: 420 SFHSVKMHTAWAPLVASYASHTTLTWLTNDGL 515
>gb|AV914685.1|AV914685 AV914685 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags7j04 5', mRNA sequence
Length = 512
Score = 190 bits (409), Expect = 7e-048
Identities = 73/88 (82%), Positives = 84/88 (95%)
Frame = +2 / +3
Query: 23 AIKQVNCVWDAYEATKGAHGVCILTEWDEFKTLDYQKIFDNMQKPAFVFDGRNIIDPEKL 202
++KQV+ VWDAYEATKGAH VCILTEW+EFK LDYQKIF+NMQKPAFVFDGRN+++ +KL
Sbjct: 6 SVKQVSVVWDAYEATKGAHAVCILTEWNEFKELDYQKIFNNMQKPAFVFDGRNVVNADKL 185
Query: 203 REIGFIVYSIGKPLDAWLKDMPAVA*FV 286
REIGFIVYSIGKPLDAWLKDMPA+A*F+
Sbjct: 186 REIGFIVYSIGKPLDAWLKDMPAIA*FL 269
Score = 159 bits (342), Expect = 1e-038
Identities = 68/90 (75%), Positives = 77/90 (85%)
Frame = -1 / -1
Query: 295 STSDELSDRGHVLKPGVERLADGVDDEADLPQLLRVDDVAAVEDEGGLLHVVEDLLVVQG 116
S +EL DRGHVL+P +ERLADGVD+EA+LP+L+ VDDVA VEDEG LLHVVEDLLVVQ
Sbjct: 278 SCGEELGDRGHVLEPRIERLADGVDNEANLPELVGVDDVAPVEDEGRLLHVVEDLLVVQL 99
Query: 115 LELVPLGQDAHPVGALGGLVRVPHAVHLFN 26
LELVPLGQDAH +G LGGLVRVPH HL +
Sbjct: 98 LELVPLGQDAHGMGPLGGLVRVPHHAHLLH 9
Score = 157 bits (337), Expect = 6e-038
Identities = 69/86 (80%), Positives = 71/86 (82%)
Frame = -2 / -2
Query: 288 QTN*ATAGMSLSQASSGLPME*TMKPISLNFSGSMMLRPSKTKAGFCMLSKIFW*SRVLN 109
+ N*A AGMSLS ASSGLPME*TMKPISL+ S LRPSKTKAGFCML KIFW*S LN
Sbjct: 271 ERN*AIAGMSLSHASSGLPME*TMKPISLSLSALTTLRPSKTKAGFCMLLKIFW*SSSLN 92
Query: 108 SSHSVRMHTPWAPLVASYASHTQFTC 31
S HSVRMHT WAPLVASYASHT TC
Sbjct: 91 SFHSVRMHTAWAPLVASYASHTTLTC 14
>gb|AV916593.1|AV916593 AV916593 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags17p02 5', mRNA sequence
Length = 521
Score = 190 bits (409), Expect = 7e-048
Identities = 73/88 (82%), Positives = 84/88 (95%)
Frame = +2 / +3
Query: 23 AIKQVNCVWDAYEATKGAHGVCILTEWDEFKTLDYQKIFDNMQKPAFVFDGRNIIDPEKL 202
++KQV+ VWDAYEATKGAH VCILTEW+EFK LDYQKIF+NMQKPAFVFDGRN+++ +KL
Sbjct: 15 SVKQVSVVWDAYEATKGAHAVCILTEWNEFKELDYQKIFNNMQKPAFVFDGRNVVNADKL 194
Query: 203 REIGFIVYSIGKPLDAWLKDMPAVA*FV 286
REIGFIVYSIGKPLDAWLKDMPA+A*F+
Sbjct: 195 REIGFIVYSIGKPLDAWLKDMPAIA*FL 278
Score = 159 bits (342), Expect = 1e-038
Identities = 68/90 (75%), Positives = 77/90 (85%)
Frame = -1 / -1
Query: 295 STSDELSDRGHVLKPGVERLADGVDDEADLPQLLRVDDVAAVEDEGGLLHVVEDLLVVQG 116
S +EL DRGHVL+P +ERLADGVD+EA+LP+L+ VDDVA VEDEG LLHVVEDLLVVQ
Sbjct: 287 SCGEELGDRGHVLEPRIERLADGVDNEANLPELVGVDDVAPVEDEGRLLHVVEDLLVVQL 108
Query: 115 LELVPLGQDAHPVGALGGLVRVPHAVHLFN 26
LELVPLGQDAH +G LGGLVRVPH HL +
Sbjct: 107 LELVPLGQDAHGMGPLGGLVRVPHHAHLLH 18
Score = 157 bits (337), Expect = 6e-038
Identities = 69/86 (80%), Positives = 71/86 (82%)
Frame = -2 / -2
Query: 288 QTN*ATAGMSLSQASSGLPME*TMKPISLNFSGSMMLRPSKTKAGFCMLSKIFW*SRVLN 109
+ N*A AGMSLS ASSGLPME*TMKPISL+ S LRPSKTKAGFCML KIFW*S LN
Sbjct: 280 ERN*AIAGMSLSHASSGLPME*TMKPISLSLSALTTLRPSKTKAGFCMLLKIFW*SSSLN 101
Query: 108 SSHSVRMHTPWAPLVASYASHTQFTC 31
S HSVRMHT WAPLVASYASHT TC
Sbjct: 100 SFHSVRMHTAWAPLVASYASHTTLTC 23
>gb|BJ464194.1|BJ464194 BJ464194 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags33e10 5', mRNA sequence
Length = 534
Score = 190 bits (409), Expect = 7e-048
Identities = 72/87 (82%), Positives = 83/87 (95%)
Frame = +2 / +2
Query: 14 SPTAIKQVNCVWDAYEATKGAHGVCILTEWDEFKTLDYQKIFDNMQKPAFVFDGRNIIDP 193
SP+++KQV+ VWDAYEATKGAH VCILTEW+EFK LDYQKIF+NMQKPAFVFDGRN+++
Sbjct: 272 SPSSVKQVSVVWDAYEATKGAHAVCILTEWNEFKELDYQKIFNNMQKPAFVFDGRNVVNA 451
Query: 194 EKLREIGFIVYSIGKPLDAWLKDMPAV 274
+KLREIGFIVYSIGKPLDAWLKDMPA+
Sbjct: 452 DKLREIGFIVYSIGKPLDAWLKDMPAI 532
Score = 155 bits (333), Expect = 2e-037
Identities = 69/88 (78%), Positives = 70/88 (79%)
Frame = -2 / -1
Query: 276 ATAGMSLSQASSGLPME*TMKPISLNFSGSMMLRPSKTKAGFCMLSKIFW*SRVLNSSHS 97
A AGMSLS ASSGLPME*TMKPISL+ S LRPSKTKAGFCML KIFW*S LNS HS
Sbjct: 534 AIAGMSLSHASSGLPME*TMKPISLSLSALTTLRPSKTKAGFCMLLKIFW*SSSLNSFHS 355
Query: 96 VRMHTPWAPLVASYASHTQFTCLMAVGL 13
VRMHT WAPLVASYASHT TC GL
Sbjct: 354 VRMHTAWAPLVASYASHTTLTCFTDDGL 271
Score = 153 bits (329), Expect = 7e-037
Identities = 67/88 (76%), Positives = 75/88 (85%)
Frame = -1 / -3
Query: 274 DRGHVLKPGVERLADGVDDEADLPQLLRVDDVAAVEDEGGLLHVVEDLLVVQGLELVPLG 95
DRGHVL+P +ERLADGVD+EA+LP+L+ VDDVA VEDEG LLHVVEDLLVVQ LELVPLG
Sbjct: 532 DRGHVLEPRIERLADGVDNEANLPELVGVDDVAPVEDEGRLLHVVEDLLVVQLLELVPLG 353
Query: 94 QDAHPVGALGGLVRVPHAVHLFNGRGAR 11
QDAH +G LGGLVRVPH HL + AR
Sbjct: 352 QDAHGMGPLGGLVRVPHHAHLLHR*WAR 269
>gb|BF260200.2|BF260200 HVSMEf0021F24f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEf0021F24f, mRNA sequence
Length = 822
Score = 189 bits (408), Expect = 9e-048
Identities = 73/91 (80%), Positives = 86/91 (94%)
Frame = +2 / +3
Query: 14 SPTAIKQVNCVWDAYEATKGAHGVCILTEWDEFKTLDYQKIFDNMQKPAFVFDGRNIIDP 193
SP+++KQV+ VWDAYEATKGAH VCILTEW+EFK LDYQKIF+NMQKPAFVFDGRN+++
Sbjct: 387 SPSSVKQVSVVWDAYEATKGAHAVCILTEWNEFKELDYQKIFNNMQKPAFVFDGRNVVNA 566
Query: 194 EKLREIGFIVYSIGKPLDAWLKDMPAVA*FV 286
+ LREIGFIVYSIG+PLDAWLKDMPA+A*F+
Sbjct: 567 D*LREIGFIVYSIGQPLDAWLKDMPAIA*FL 659
Score = 158 bits (340), Expect = 2e-038
Identities = 69/92 (75%), Positives = 78/92 (84%)
Frame = -1 / -2
Query: 286 DELSDRGHVLKPGVERLADGVDDEADLPQLLRVDDVAAVEDEGGLLHVVEDLLVVQGLEL 107
+EL DRGHVL+P +ERLADGVD+EA+LP+L+ VDDVA VEDEG LLHVVEDLLVVQ LEL
Sbjct: 659 EELGDRGHVLEPRIERLADGVDNEANLPELVGVDDVAPVEDEGRLLHVVEDLLVVQLLEL 480
Query: 106 VPLGQDAHPVGALGGLVRVPHAVHLFNGRGAR 11
VPLGQDAH +G LGGLVRVPH HL + AR
Sbjct: 479 VPLGQDAHGMGPLGGLVRVPHHAHLLHR*WAR 384
Score = 154 bits (330), Expect = 5e-037
Identities = 70/90 (77%), Positives = 71/90 (78%)
Frame = -2 / -3
Query: 282 N*ATAGMSLSQASSGLPME*TMKPISLNFSGSMMLRPSKTKAGFCMLSKIFW*SRVLNSS 103
N*A AGMSLS ASSG PME*TMKPISL+ S LRPSKTKAGFCML KIFW*S LNS
Sbjct: 655 N*AIAGMSLSHASSGWPME*TMKPISLS*SALTTLRPSKTKAGFCMLLKIFW*SSSLNSF 476
Query: 102 HSVRMHTPWAPLVASYASHTQFTCLMAVGL 13
HSVRMHT WAPLVASYASHT TC GL
Sbjct: 475 HSVRMHTAWAPLVASYASHTTLTCFTDDGL 386
>gb|BJ467893.1|BJ467893 BJ467893 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags30d14 3', mRNA sequence
Length = 607
Score = 187 bits (402), Expect = 6e-047
Identities = 73/83 (87%), Positives = 79/83 (95%)
Frame = +2 / -1
Query: 35 VNCVWDAYEATKGAHGVCILTEWDEFKTLDYQKIFDNMQKPAFVFDGRNIIDPEKLREIG 214
V+ VWDAYEATKGAH VCILTEW+EFK+LDY+KIFDNMQKPAFVFDGRN++D EKLREIG
Sbjct: 607 VSVVWDAYEATKGAHAVCILTEWNEFKSLDYKKIFDNMQKPAFVFDGRNVVDAEKLREIG 428
Query: 215 FIVYSIGKPLDAWLKDMPAVA*F 283
FIVYSIGKPLD WLKDMPAVA*F
Sbjct: 427 FIVYSIGKPLDGWLKDMPAVA*F 359
Score = 163 bits (351), Expect(2) = 6e-040
Identities = 71/83 (85%), Positives = 74/83 (89%)
Frame = -1 / +2
Query: 283 ELSDRGHVLKPGVERLADGVDDEADLPQLLRVDDVAAVEDEGGLLHVVEDLLVVQGLELV 104
EL D GHVL+P VERLADGVDDEADLP+LL VDDVAAVEDEG LLHVVEDLLVVQ LELV
Sbjct: 359 ELGDGGHVLEPPVERLADGVDDEADLPELLGVDDVAAVEDEGRLLHVVEDLLVVQRLELV 538
Query: 103 PLGQDAHPVGALGGLVRVPHAVH 35
PLG+DAH VGALGGLVRVPH H
Sbjct: 539 PLGEDAHGVGALGGLVRVPHHAH 607
Score = 153 bits (329), Expect = 7e-037
Identities = 69/82 (84%), Positives = 71/82 (86%)
Frame = -2 / +3
Query: 288 QTN*ATAGMSLSQASSGLPME*TMKPISLNFSGSMMLRPSKTKAGFCMLSKIFW*SRVLN 109
+ N*ATAGMSLS SSGLPME*TMKPISL+FS S LRPSKTKAGFCMLSKIF *S LN
Sbjct: 354 RAN*ATAGMSLSHPSSGLPME*TMKPISLSFSASTTLRPSKTKAGFCMLSKIFL*SSDLN 533
Query: 108 SSHSVRMHTPWAPLVASYASHT 43
S HSVRMHT WAPLVASYASHT
Sbjct: 534 SFHSVRMHTAWAPLVASYASHT 599
Score = 21.7 bits (41), Expect(2) = 6e-040
Identities = 8/17 (47%), Positives = 11/17 (64%)
Frame = -3 / +1
Query: 530 EEPTSYSGSRVQPYKDI 480
EEPT Y R+Q K++
Sbjct: 31 EEPTGYKVHRIQRGKNL 81
>gb|BQ766482.1|BQ766482 EBro08_SQ006_N06_R root, 3 week, drought-stressed, cv Optic, EBro08
Hordeum vulgare subsp. vulgare cDNA clone
EBro08_SQ006_N06 5', mRNA sequence
Length = 694
Score = 183 bits (395), Expect = 6e-046
Identities = 71/89 (79%), Positives = 80/89 (89%)
Frame = +2 / +3
Query: 14 SPTAIKQVNCVWDAYEATKGAHGVCILTEWDEFKTLDYQKIFDNMQKPAFVFDGRNIIDP 193
SPT KQV+ WDAYEATK AHG+CI+TEWDEFKTLDY+KI+D+MQKPAFVFD +++D
Sbjct: 414 SPTTTKQVSVTWDAYEATKDAHGICIMTEWDEFKTLDYKKIYDSMQKPAFVFDXPHVVDS 593
Query: 194 EKLREIGFIVYSIGKPLDAWLKDMPAVA* 280
EKLREIGFIVYSIGKPLD WLKDMPAVA*
Sbjct: 594 EKLREIGFIVYSIGKPLDGWLKDMPAVA* 680
Score = 140 bits (301), Expect = 5e-033
Identities = 67/89 (75%), Positives = 69/89 (77%)
Frame = -2 / -1
Query: 279 *ATAGMSLSQASSGLPME*TMKPISLNFSGSMMLRPSKTKAGFCMLSKIFW*SRVLNSSH 100
*ATAGMSLSQ SSGLPME*TM PISL+FS S SKTKAGFCMLS IF *SRVLNSSH
Sbjct: 679 *ATAGMSLSQPSSGLPME*TMNPISLSFSESTTCGXSKTKAGFCMLS*IFL*SRVLNSSH 500
Query: 99 SVRMHTPWAPLVASYASHTQFTCLMAVGL 13
SV M PWA LVASYAS TC + VGL
Sbjct: 499 SVMMQMPWASLVASYASQVTETCFVVVGL 413
Score = 100 bits (214), Expect = 5e-021
Identities = 42/78 (53%), Positives = 60/78 (76%)
Frame = -1 / -3
Query: 280 LSDRGHVLKPGVERLADGVDDEADLPQLLRVDDVAAVEDEGGLLHVVEDLLVVQGLELVP 101
LS HVL+P VE LA+GVD+E++ P+LLRV+++ ++++G LLH V DLLVV+ LEL+P
Sbjct: 680 LSHSRHVLEPTVEWLANGVDNESNFPELLRVNNMRXIKNKGRLLHAVIDLLVVKSLELIP 501
Query: 100 LGQDAHPVGALGGLVRVP 47
L DA +G LG L+R+P
Sbjct: 500 LSHDADAMGILGRLIRIP 447
>gb|AV920622.1|AV920622 AV920622 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags14o14 3', mRNA sequence
Length = 708
Score = 162 bits (349), Expect(2) = 5e-045
Identities = 63/72 (87%), Positives = 69/72 (95%)
Frame = +2 / -2
Query: 68 KGAHGVCILTEWDEFKTLDYQKIFDNMQKPAFVFDGRNIIDPEKLREIGFIVYSIGKPLD 247
+GAH VCILTEW+EFK+LDY+KIFDNMQKPAFVFDGRN++D EKLREIGFIVYSIGKPLD
Sbjct: 587 RGAHAVCILTEWNEFKSLDYKKIFDNMQKPAFVFDGRNVVDAEKLREIGFIVYSIGKPLD 408
Query: 248 AWLKDMPAVA*F 283
WLKDMPAVA*F
Sbjct: 407 GWLKDMPAVA*F 372
Score = 138 bits (297), Expect(2) = 2e-037
Identities = 61/71 (85%), Positives = 64/71 (90%)
Frame = -1 / +3
Query: 283 ELSDRGHVLKPGVERLADGVDDEADLPQLLRVDDVAAVEDEGGLLHVVEDLLVVQGLELV 104
EL D GHVL+P VERLADGVDDEADLP+LL VDDVAAVEDEG LLHVVEDLLVVQ LELV
Sbjct: 372 ELGDGGHVLEPPVERLADGVDDEADLPELLGVDDVAAVEDEGRLLHVVEDLLVVQRLELV 551
Query: 103 PLGQDAHPVGA 71
PLG+DAH VGA
Sbjct: 552 PLGEDAHGVGA 584
Score = 135 bits (289), Expect(2) = 7e-036
Identities = 61/74 (82%), Positives = 63/74 (85%)
Frame = -2 / +1
Query: 288 QTN*ATAGMSLSQASSGLPME*TMKPISLNFSGSMMLRPSKTKAGFCMLSKIFW*SRVLN 109
+ N*ATAGMSLS SSGLPME*TMKPISL+FS S LRPSKTKAGFCMLSKIF *S LN
Sbjct: 367 RAN*ATAGMSLSHPSSGLPME*TMKPISLSFSASTTLRPSKTKAGFCMLSKIFL*SSDLN 546
Query: 108 SSHSVRMHTPWAPL 67
S HSVRMHT WAPL
Sbjct: 547 SFHSVRMHTAWAPL 588
Score = 38.2 bits (77), Expect(2) = 5e-045
Identities = 15/20 (75%), Positives = 16/20 (80%)
Frame = +2 / -1
Query: 14 SPTAIKQVNCVWDAYEATKG 73
SP KQV+ VWDAYEATKG
Sbjct: 642 SPHGRKQVSVVWDAYEATKG 583
Score = 36.3 bits (73), Expect(2) = 2e-037
Identities = 15/20 (75%), Positives = 15/20 (75%)
Frame = -2 / +2
Query: 72 PLVASYASHTQFTCLMAVGL 13
PLVASYASHT TCL GL
Sbjct: 584 PLVASYASHTTLTCLRPWGL 643
Score = 35.0 bits (70), Expect(2) = 7e-036
Identities = 14/20 (70%), Positives = 14/20 (70%)
Frame = -1 / +1
Query: 70 LGGLVRVPHAVHLFNGRGAR 11
LGGLVRVPH HL GAR
Sbjct: 586 LGGLVRVPHHAHLLTAVGAR 645
>gb|AL511829.1|AL511829 AL511829 Hordeum vulgare Barke developing caryopsis (3.-15.DAP)
Hordeum vulgare subsp. vulgare cDNA clone HY09G05u 3',
mRNA sequence
Length = 666
Score = 179 bits (385), Expect = 1e-044
Identities = 68/78 (87%), Positives = 75/78 (96%)
Frame = +2 / -2
Query: 47 WDAYEATKGAHGVCILTEWDEFKTLDYQKIFDNMQKPAFVFDGRNIIDPEKLREIGFIVY 226
WDAYEATK AHG+CI+TEWDEFKTLDY+KI+D+MQKPAFVFDGRN++D EKLREIGFIVY
Sbjct: 557 WDAYEATKDAHGICIMTEWDEFKTLDYKKIYDSMQKPAFVFDGRNVVDSEKLREIGFIVY 378
Query: 227 SIGKPLDAWLKDMPAVA* 280
SIGKPLD WLKDMPAVA*
Sbjct: 377 SIGKPLDGWLKDMPAVA* 324
Score = 138 bits (297), Expect = 2e-032
Identities = 65/77 (84%), Positives = 66/77 (85%)
Frame = -2 / +1
Query: 279 *ATAGMSLSQASSGLPME*TMKPISLNFSGSMMLRPSKTKAGFCMLSKIFW*SRVLNSSH 100
*ATAGMSLSQ SSGLPME*TM PISL+FS S LRPSKTKAGFCMLS IF *SRVLNSSH
Sbjct: 325 *ATAGMSLSQPSSGLPME*TMNPISLSFSESTTLRPSKTKAGFCMLS*IFL*SRVLNSSH 504
Query: 99 SVRMHTPWAPLVASYAS 49
SV M PWA LVASYAS
Sbjct: 505 SVMMQMPWASLVASYAS 555
Score = 105 bits (225), Expect = 2e-022
Identities = 44/78 (56%), Positives = 62/78 (79%)
Frame = -1 / +3
Query: 280 LSDRGHVLKPGVERLADGVDDEADLPQLLRVDDVAAVEDEGGLLHVVEDLLVVQGLELVP 101
LS HVL+P VE LA+GVD+E++ P+LLRV+++AA++++G LLH V DLLVV+ LEL+P
Sbjct: 324 LSHSRHVLEPTVEWLANGVDNESNFPELLRVNNIAAIKNKGRLLHAVIDLLVVKSLELIP 503
Query: 100 LGQDAHPVGALGGLVRVP 47
L DA +G LG L+R+P
Sbjct: 504 LSHDADAMGILGRLIRIP 557
>gb|AV919777.1|AV919777 AV919777 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags7j04 3', mRNA sequence
Length = 488
Score = 159 bits (342), Expect(2) = 6e-044
Identities = 61/73 (83%), Positives = 70/73 (95%)
Frame = +2 / -1
Query: 68 KGAHGVCILTEWDEFKTLDYQKIFDNMQKPAFVFDGRNIIDPEKLREIGFIVYSIGKPLD 247
+GAH VCILTEW+EFK LDYQKIF+NMQKPAFVFDGRN+++ +KLREIGFIVYSIGKPLD
Sbjct: 437 RGAHAVCILTEWNEFKELDYQKIFNNMQKPAFVFDGRNVVNADKLREIGFIVYSIGKPLD 258
Query: 248 AWLKDMPAVA*FV 286
AWLKDMPA+A*F+
Sbjct: 257 AWLKDMPAIA*FL 219
Score = 133 bits (284), Expect(2) = 1e-033
Identities = 59/74 (79%), Positives = 61/74 (82%)
Frame = -2 / +1
Query: 288 QTN*ATAGMSLSQASSGLPME*TMKPISLNFSGSMMLRPSKTKAGFCMLSKIFW*SRVLN 109
+ N*A AGMSLS ASSGLPME*TMKPISL+ S LRPSKTKAGFCML KIFW*S LN
Sbjct: 217 ERN*AIAGMSLSHASSGLPME*TMKPISLSLSALTTLRPSKTKAGFCMLLKIFW*SSSLN 396
Query: 108 SSHSVRMHTPWAPL 67
S HSVRMHT WAPL
Sbjct: 397 SFHSVRMHTAWAPL 438
Score = 133 bits (284), Expect(2) = 2e-034
Identities = 57/74 (77%), Positives = 65/74 (87%)
Frame = -1 / +3
Query: 295 STSDELSDRGHVLKPGVERLADGVDDEADLPQLLRVDDVAAVEDEGGLLHVVEDLLVVQG 116
S +EL DRGHVL+P +ERLADGVD+EA+LP+L+ VDDVA VEDEG LLHVVEDLLVVQ
Sbjct: 210 SCGEELGDRGHVLEPRIERLADGVDNEANLPELVGVDDVAPVEDEGRLLHVVEDLLVVQL 389
Query: 115 LELVPLGQDAHPVG 74
LELVPLGQDAH +G
Sbjct: 390 LELVPLGQDAHGMG 431
Score = 37.7 bits (76), Expect(2) = 6e-044
Identities = 13/18 (72%), Positives = 17/18 (94%)
Frame = +2 / -3
Query: 20 TAIKQVNCVWDAYEATKG 73
+++KQV+ VWDAYEATKG
Sbjct: 486 SSVKQVSVVWDAYEATKG 433
Score = 32.2 bits (64), Expect(2) = 2e-034
Identities = 12/14 (85%), Positives = 12/14 (85%)
Frame = -2 / +2
Query: 72 PLVASYASHTQFTC 31
PLVASYASHT TC
Sbjct: 434 PLVASYASHTTLTC 475
Score = 29.9 bits (59), Expect(2) = 1e-033
Identities = 11/15 (73%), Positives = 12/15 (80%)
Frame = -1 / +1
Query: 70 LGGLVRVPHAVHLFN 26
LGGLVRVPH HL +
Sbjct: 436 LGGLVRVPHHAHLLH 480
>gb|AV918120.1|AV918120 AV918120 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags17p02 3', mRNA sequence
Length = 477
Score = 159 bits (342), Expect(2) = 6e-044
Identities = 61/73 (83%), Positives = 70/73 (95%)
Frame = +2 / -2
Query: 68 KGAHGVCILTEWDEFKTLDYQKIFDNMQKPAFVFDGRNIIDPEKLREIGFIVYSIGKPLD 247
+GAH VCILTEW+EFK LDYQKIF+NMQKPAFVFDGRN+++ +KLREIGFIVYSIGKPLD
Sbjct: 425 RGAHAVCILTEWNEFKELDYQKIFNNMQKPAFVFDGRNVVNADKLREIGFIVYSIGKPLD 246
Query: 248 AWLKDMPAVA*FV 286
AWLKDMPA+A*F+
Sbjct: 245 AWLKDMPAIA*FL 207
Score = 133 bits (284), Expect(2) = 1e-033
Identities = 59/74 (79%), Positives = 61/74 (82%)
Frame = -2 / +1
Query: 288 QTN*ATAGMSLSQASSGLPME*TMKPISLNFSGSMMLRPSKTKAGFCMLSKIFW*SRVLN 109
+ N*A AGMSLS ASSGLPME*TMKPISL+ S LRPSKTKAGFCML KIFW*S LN
Sbjct: 205 ERN*AIAGMSLSHASSGLPME*TMKPISLSLSALTTLRPSKTKAGFCMLLKIFW*SSSLN 384
Query: 108 SSHSVRMHTPWAPL 67
S HSVRMHT WAPL
Sbjct: 385 SFHSVRMHTAWAPL 426
Score = 133 bits (284), Expect(2) = 2e-034
Identities = 57/74 (77%), Positives = 65/74 (87%)
Frame = -1 / +3
Query: 295 STSDELSDRGHVLKPGVERLADGVDDEADLPQLLRVDDVAAVEDEGGLLHVVEDLLVVQG 116
S +EL DRGHVL+P +ERLADGVD+EA+LP+L+ VDDVA VEDEG LLHVVEDLLVVQ
Sbjct: 198 SCGEELGDRGHVLEPRIERLADGVDNEANLPELVGVDDVAPVEDEGRLLHVVEDLLVVQL 377
Query: 115 LELVPLGQDAHPVG 74
LELVPLGQDAH +G
Sbjct: 378 LELVPLGQDAHGMG 419
Score = 37.7 bits (76), Expect(2) = 6e-044
Identities = 13/18 (72%), Positives = 17/18 (94%)
Frame = +2 / -1
Query: 20 TAIKQVNCVWDAYEATKG 73
+++KQV+ VWDAYEATKG
Sbjct: 474 SSVKQVSVVWDAYEATKG 421
Score = 32.2 bits (64), Expect(2) = 2e-034
Identities = 12/14 (85%), Positives = 12/14 (85%)
Frame = -2 / +2
Query: 72 PLVASYASHTQFTC 31
PLVASYASHT TC
Sbjct: 422 PLVASYASHTTLTC 463
Score = 29.9 bits (59), Expect(2) = 1e-033
Identities = 11/15 (73%), Positives = 12/15 (80%)
Frame = -1 / +1
Query: 70 LGGLVRVPHAVHLFN 26
LGGLVRVPH HL +
Sbjct: 424 LGGLVRVPHHAHLLH 468
>gb|CB880777.1|CB880777 HM07M18w HM Hordeum vulgare subsp. vulgare cDNA clone HM07M18
3-PRIME, mRNA sequence
Length = 614
Score = 175 bits (377), Expect(2) = 2e-043
Identities = 69/77 (89%), Positives = 74/77 (96%)
Frame = +2 / -1
Query: 53 AYEATKGAHGVCILTEWDEFKTLDYQKIFDNMQKPAFVFDGRNIIDPEKLREIGFIVYSI 232
AYEATKGAH VCILTEW+EFK+LDY+KIFDNMQKPAFVFDGRN++D EKLREIGFIVYSI
Sbjct: 614 AYEATKGAHAVCILTEWNEFKSLDYKKIFDNMQKPAFVFDGRNVVDAEKLREIGFIVYSI 435
Query: 233 GKPLDAWLKDMPAVA*F 283
GKPLD WLKDMPAVA*F
Sbjct: 434 GKPLDGWLKDMPAVA*F 384
Score = 152 bits (326), Expect(2) = 2e-036
Identities = 67/77 (87%), Positives = 70/77 (90%)
Frame = -1 / +3
Query: 283 ELSDRGHVLKPGVERLADGVDDEADLPQLLRVDDVAAVEDEGGLLHVVEDLLVVQGLELV 104
EL D GHVL+P VERLADGVDDEADLP+LL VDDVAAVEDEG LLHVVEDLLVVQ LELV
Sbjct: 384 ELGDGGHVLEPPVERLADGVDDEADLPELLGVDDVAAVEDEGRLLHVVEDLLVVQRLELV 563
Query: 103 PLGQDAHPVGALGGLVR 53
PLG+DAH VGALGGLVR
Sbjct: 564 PLGEDAHGVGALGGLVR 614
Score = 144 bits (308), Expect = 6e-034
Identities = 65/78 (83%), Positives = 67/78 (85%)
Frame = -2 / +1
Query: 288 QTN*ATAGMSLSQASSGLPME*TMKPISLNFSGSMMLRPSKTKAGFCMLSKIFW*SRVLN 109
+ N*ATAGMSLS SSGLPME*TMKPISL+FS S LRPSKTKAGFCMLSKIF *S LN
Sbjct: 379 RAN*ATAGMSLSHPSSGLPME*TMKPISLSFSASTTLRPSKTKAGFCMLSKIFL*SSDLN 558
Query: 108 SSHSVRMHTPWAPLVASY 55
S HSVRMHT WAPLVASY
Sbjct: 559 SFHSVRMHTAWAPLVASY 612
Score = 21.7 bits (41), Expect(2) = 2e-043
Identities = 7/11 (63%), Positives = 8/11 (72%)
Frame = +3 / -1
Query: 495 LYPGPAIAGWF 527
LYP +AGWF
Sbjct: 83 LYPMNFVAGWF 51
Score = 21.7 bits (41), Expect(2) = 2e-036
Identities = 8/17 (47%), Positives = 11/17 (64%)
Frame = -3 / +3
Query: 530 EEPTSYSGSRVQPYKDI 480
EEPT Y R+Q K++
Sbjct: 48 EEPTGYKVHRIQRGKNL 98
>gb|AJ463225.1|AJ463225 AJ463225 S00002 Hordeum vulgare subsp. vulgare cDNA clone
S0000200034H12F2, mRNA sequence
Length = 420
Score = 175 bits (377), Expect = 2e-043
Identities = 69/77 (89%), Positives = 74/77 (96%)
Frame = +2 / +1
Query: 53 AYEATKGAHGVCILTEWDEFKTLDYQKIFDNMQKPAFVFDGRNIIDPEKLREIGFIVYSI 232
AYEATKGAH VCILTEW+EFK+LDY+KIFDNMQKPAFVFDGRN++D EKLREIGFIVYSI
Sbjct: 1 AYEATKGAHAVCILTEWNEFKSLDYKKIFDNMQKPAFVFDGRNVVDAEKLREIGFIVYSI 180
Query: 233 GKPLDAWLKDMPAVA*F 283
GKPLD WLKDMPAVA*F
Sbjct: 181 GKPLDGWLKDMPAVA*F 231
Score = 152 bits (326), Expect = 2e-036
Identities = 67/77 (87%), Positives = 70/77 (90%)
Frame = -1 / -1
Query: 283 ELSDRGHVLKPGVERLADGVDDEADLPQLLRVDDVAAVEDEGGLLHVVEDLLVVQGLELV 104
EL D GHVL+P VERLADGVDDEADLP+LL VDDVAAVEDEG LLHVVEDLLVVQ LELV
Sbjct: 231 ELGDGGHVLEPPVERLADGVDDEADLPELLGVDDVAAVEDEGRLLHVVEDLLVVQRLELV 52
Query: 103 PLGQDAHPVGALGGLVR 53
PLG+DAH VGALGGLVR
Sbjct: 51 PLGEDAHGVGALGGLVR 1
Score = 144 bits (308), Expect = 6e-034
Identities = 65/78 (83%), Positives = 67/78 (85%)
Frame = -2 / -2
Query: 288 QTN*ATAGMSLSQASSGLPME*TMKPISLNFSGSMMLRPSKTKAGFCMLSKIFW*SRVLN 109
+ N*ATAGMSLS SSGLPME*TMKPISL+FS S LRPSKTKAGFCMLSKIF *S LN
Sbjct: 236 RAN*ATAGMSLSHPSSGLPME*TMKPISLSFSASTTLRPSKTKAGFCMLSKIFL*SSDLN 57
Query: 108 SSHSVRMHTPWAPLVASY 55
S HSVRMHT WAPLVASY
Sbjct: 56 SFHSVRMHTAWAPLVASY 3
>gb|BJ466501.1|BJ466501 BJ466501 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags32h13 3', mRNA sequence
Length = 503
Score = 174 bits (374), Expect = 4e-043
Identities = 67/77 (87%), Positives = 74/77 (96%)
Frame = +2 / -1
Query: 50 DAYEATKGAHGVCILTEWDEFKTLDYQKIFDNMQKPAFVFDGRNIIDPEKLREIGFIVYS 229
DAYEATK AHG+CI+TEWDEFKTLDY+KI+D+MQKPAFVFDGRN++D EKLREIGFIVYS
Sbjct: 503 DAYEATKDAHGICIMTEWDEFKTLDYKKIYDSMQKPAFVFDGRNVVDSEKLREIGFIVYS 324
Query: 230 IGKPLDAWLKDMPAVA* 280
IGKPLD WLKDMPAVA*
Sbjct: 323 IGKPLDGWLKDMPAVA* 273
Score = 137 bits (293), Expect = 7e-032
Identities = 64/76 (84%), Positives = 65/76 (85%)
Frame = -2 / +1
Query: 279 *ATAGMSLSQASSGLPME*TMKPISLNFSGSMMLRPSKTKAGFCMLSKIFW*SRVLNSSH 100
*ATAGMSLSQ SSGLPME*TM PISL+FS S LRPSKTKAGFCMLS IF *SRVLNSSH
Sbjct: 274 *ATAGMSLSQPSSGLPME*TMNPISLSFSESTTLRPSKTKAGFCMLS*IFL*SRVLNSSH 453
Query: 99 SVRMHTPWAPLVASYA 52
SV M PWA LVASYA
Sbjct: 454 SVMMQMPWASLVASYA 501
Score = 102 bits (218), Expect = 1e-021
Identities = 43/77 (55%), Positives = 61/77 (79%)
Frame = -1 / +3
Query: 280 LSDRGHVLKPGVERLADGVDDEADLPQLLRVDDVAAVEDEGGLLHVVEDLLVVQGLELVP 101
LS HVL+P VE LA+GVD+E++ P+LLRV+++AA++++G LLH V DLLVV+ LEL+P
Sbjct: 273 LSHSRHVLEPTVEWLANGVDNESNFPELLRVNNIAAIKNKGRLLHAVIDLLVVKSLELIP 452
Query: 100 LGQDAHPVGALGGLVRV 50
L DA +G LG L+R+
Sbjct: 453 LSHDADAMGILGRLIRI 503
>gb|AL502363.1|AL502363 AL502363 Hordeum vulgare Barke roots Hordeum vulgare subsp. vulgare
cDNA clone HW07F10u 3', mRNA sequence
Length = 598
Score = 116 bits (247), Expect(2) = 1e-042
Identities = 45/53 (84%), Positives = 52/53 (98%)
Frame = +2 / -1
Query: 128 QKIFDNMQKPAFVFDGRNIIDPEKLREIGFIVYSIGKPLDAWLKDMPAVA*FV 286
QKIF+NMQKPAFVFDGRN+++ +KLREIGFIVYSIGKPLDAWLKDMPA+A*F+
Sbjct: 394 QKIFNNMQKPAFVFDGRNVVNADKLREIGFIVYSIGKPLDAWLKDMPAIA*FL 236
Score = 100 bits (213), Expect(2) = 8e-034
Identities = 42/56 (75%), Positives = 49/56 (87%)
Frame = -1 / +2
Query: 295 STSDELSDRGHVLKPGVERLADGVDDEADLPQLLRVDDVAAVEDEGGLLHVVEDLL 128
S +EL DRGHVL+P +ERLADGVD+EA+LP+L+ VDDVA VEDEG LLHVVEDLL
Sbjct: 227 SCGEELGDRGHVLEPRIERLADGVDNEANLPELVGVDDVAPVEDEGRLLHVVEDLL 394
Score = 76.7 bits (161), Expect(2) = 1e-042
Identities = 28/34 (82%), Positives = 31/34 (91%)
Frame = +2 / -3
Query: 26 IKQVNCVWDAYEATKGAHGVCILTEWDEFKTLDY 127
+KQV+ VWDAYEATKGAH VCILTEW+EFK LDY
Sbjct: 497 VKQVSVVWDAYEATKGAHAVCILTEWNEFKELDY 396
Score = 62.9 bits (131), Expect(2) = 8e-034
Identities = 26/32 (81%), Positives = 26/32 (81%)
Frame = -2 / +1
Query: 126 *SRVLNSSHSVRMHTPWAPLVASYASHTQFTC 31
*S LNS HSVRMHT WAPLVASYASHT TC
Sbjct: 397 *SSSLNSFHSVRMHTAWAPLVASYASHTTLTC 492
>gb|AV915738.1|AV915738 AV915738 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags15n06 5', mRNA sequence
Length = 594
Score = 164 bits (353), Expect = 4e-040
Identities = 62/76 (81%), Positives = 70/76 (92%)
Frame = +2 / +2
Query: 14 SPTAIKQVNCVWDAYEATKGAHGVCILTEWDEFKTLDYQKIFDNMQKPAFVFDGRNIIDP 193
SPT KQV+ WDAYEATK AHG+CI+TEWDEFKTLDY+KI+D+MQKPAFVFDGRN++D
Sbjct: 365 SPTTTKQVSVTWDAYEATKDAHGICIMTEWDEFKTLDYKKIYDSMQKPAFVFDGRNVVDS 544
Query: 194 EKLREIGFIVYSIGKP 241
EKLREIGFIVYSIGKP
Sbjct: 545 EKLREIGFIVYSIGKP 592
Score = 129 bits (277), Expect = 1e-029
Identities = 59/77 (76%), Positives = 61/77 (79%)
Frame = -2 / -1
Query: 243 SGLPME*TMKPISLNFSGSMMLRPSKTKAGFCMLSKIFW*SRVLNSSHSVRMHTPWAPLV 64
SGLPME*TM PISL+FS S LRPSKTKAGFCMLS IF *SRVLNSSHSV M PWA LV
Sbjct: 594 SGLPME*TMNPISLSFSESTTLRPSKTKAGFCMLS*IFL*SRVLNSSHSVMMQMPWASLV 415
Query: 63 ASYASHTQFTCLMAVGL 13
ASYAS TC + VGL
Sbjct: 414 ASYASQVTETCFVVVGL 364
>gb|BM370810.2|BM370810 EBro04_SQ002_F16_R root, 3 week, salt-stressed, cv Optic, EBro04
Hordeum vulgare subsp. vulgare cDNA clone
EBro04_SQ002_F16 5', mRNA sequence
Length = 490
Score = 163 bits (350), Expect = 9e-040
Identities = 63/73 (86%), Positives = 70/73 (95%)
Frame = +2 / +2
Query: 14 SPTAIKQVNCVWDAYEATKGAHGVCILTEWDEFKTLDYQKIFDNMQKPAFVFDGRNIIDP 193
SPTA+KQV+ VWDAYEATKGAH VCILTEW+EFK+LDY+KIFDNMQKPAFVFDGRN++D
Sbjct: 272 SPTAVKQVSVVWDAYEATKGAHAVCILTEWNEFKSLDYKKIFDNMQKPAFVFDGRNVVDA 451
Query: 194 EKLREIGFIVYSI 232
EKLREIGFIVYSI
Sbjct: 452 EKLREIGFIVYSI 490
Score = 149 bits (319), Expect = 2e-035
Identities = 64/74 (86%), Positives = 67/74 (90%)
Frame = -1 / -1
Query: 232 DGVDDEADLPQLLRVDDVAAVEDEGGLLHVVEDLLVVQGLELVPLGQDAHPVGALGGLVR 53
DGVDDEADLP+LL VDDVAAVEDEG LLHVVEDLLVVQ LELVPLG+DAH VGALGGLVR
Sbjct: 490 DGVDDEADLPELLGVDDVAAVEDEGRLLHVVEDLLVVQRLELVPLGEDAHGVGALGGLVR 311
Query: 52 VPHAVHLFNGRGAR 11
VPH HL +GRGAR
Sbjct: 310 VPHHAHLLHGRGAR 269
Score = 136 bits (291), Expect = 1e-031
Identities = 60/73 (82%), Positives = 61/73 (83%)
Frame = -2 / -2
Query: 231 ME*TMKPISLNFSGSMMLRPSKTKAGFCMLSKIFW*SRVLNSSHSVRMHTPWAPLVASYA 52
ME*TMKPISL+FS S LRPSKTKAGFCMLSKIF *S LNS HSVRMHT WAPLVASYA
Sbjct: 489 ME*TMKPISLSFSASTTLRPSKTKAGFCMLSKIFL*SSDLNSFHSVRMHTAWAPLVASYA 310
Query: 51 SHTQFTCLMAVGL 13
SHT TC AVGL
Sbjct: 309 SHTTLTCFTAVGL 271
>gb|AW982536.3|AW982536 HVSMEg0003I12f Hordeum vulgare pre-anthesis spike EST library
HVcDNA0008 (white to yellow anther) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEg0003I12f, mRNA sequence
Length = 535
Score = 162 bits (348), Expect = 2e-039
Identities = 62/72 (86%), Positives = 69/72 (95%)
Frame = +2 / +3
Query: 65 TKGAHGVCILTEWDEFKTLDYQKIFDNMQKPAFVFDGRNIIDPEKLREIGFIVYSIGKPL 244
TK AHG+CI+TEWDEFKTLDY+KI+D+MQKPAFVFDGRN++D EKLREIGFIVYSIGKPL
Sbjct: 3 TKDAHGICIMTEWDEFKTLDYKKIYDSMQKPAFVFDGRNVVDSEKLREIGFIVYSIGKPL 182
Query: 245 DAWLKDMPAVA* 280
D WLKDMPAVA*
Sbjct: 183 DGWLKDMPAVA* 218
Score = 128 bits (274), Expect = 3e-029
Identities = 60/72 (83%), Positives = 61/72 (84%)
Frame = -2 / -1
Query: 279 *ATAGMSLSQASSGLPME*TMKPISLNFSGSMMLRPSKTKAGFCMLSKIFW*SRVLNSSH 100
*ATAGMSLSQ SSGLPME*TM PISL+FS S LRPSKTKAGFCMLS IF *SRVLNSSH
Sbjct: 217 *ATAGMSLSQPSSGLPME*TMNPISLSFSESTTLRPSKTKAGFCMLS*IFL*SRVLNSSH 38
Query: 99 SVRMHTPWAPLV 64
SV M PWA LV
Sbjct: 37 SVMMQMPWASLV 2
Database: Hordeum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:16 PM
Number of letters in database: 175,134,539
Number of sequences in database: 312,970
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 267,563,652
Number of Sequences: 312970
Number of extensions: 4206307
Number of successful extensions: 56504
Number of sequences better than 1.0e-020: 102
length of database: 58,378,179
effective HSP length: 51
effective length of database: 42,416,709
effective search space used: 6489756477
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)