TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2404800.2.1
(1228 letters)
Database: Hordeum_nucl_with_EST.fasta
312,970 sequences; 175,134,539 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|AW982411.2|AW982411 HVSMEg0003D05f Hordeum vulgare pre-a... 285 8e-082
emb|X77467.1|HVOMET H.vulgare L. mRNA for flavonoid 7-O-met... 182 4e-079
gb|BG343272.2|BG343272 HVSMEg0005E13f Hordeum vulgare pre-a... 158 2e-076
gb|BF259471.1|BF259471 HVSMEf0019D06f Hordeum vulgare seedl... 280 1e-074
gb|BI956571.1|BI956571 HVSMEn0004D06f Hordeum vulgare rachi... 244 6e-073
gb|BM817329.1|BM817329 HC105E06_T3.ab1 HC Hordeum vulgare s... 171 9e-069
gb|AV836790.1|AV836790 AV836790 K. Sato unpublished cDNA li... 157 3e-067
gb|BF628874.2|BF628874 HVSMEb0009A12f Hordeum vulgare seedl... 246 2e-064
gb|BI960501.1|BI960501 HVSMEn0024N01f Hordeum vulgare rachi... 140 6e-061
gb|BI957606.1|BI957606 HVSMEn0010F15f Hordeum vulgare rachi... 140 6e-061
gb|BG344915.2|BG344915 HVSMEg0016N12f Hordeum vulgare pre-a... 140 6e-058
gb|BI958645.1|BI958645 HVSMEn0016A21f Hordeum vulgare rachi... 140 9e-058
gb|BJ462654.1|BJ462654 BJ462654 K. Sato unpublished cDNA li... 221 5e-057
gb|BU974771.1|BU974771 HB29A24r BC Hordeum vulgare subsp. v... 159 3e-056
gb|BI959987.1|BI959987 HVSMEn0022M02f Hordeum vulgare rachi... 130 9e-056
gb|BJ467760.1|BJ467760 BJ467760 K. Sato unpublished cDNA li... 215 4e-055
gb|AV917258.1|AV917258 AV917258 K. Sato unpublished cDNA li... 206 2e-052
gb|AV922427.1|AV922427 AV922427 K. Sato unpublished cDNA li... 206 2e-052
gb|CB877071.1|CB877071 HP03H10T HP Hordeum vulgare subsp. v... 159 2e-051
gb|CB879734.1|CB879734 HP03H10w HP Hordeum vulgare subsp. v... 159 2e-051
gb|BJ449787.1|BJ449787 BJ449787 K. Sato unpublished cDNA li... 155 1e-050
gb|AL503735.1|AL503735 AL503735 Hordeum vulgare Barke roots... 200 1e-050
gb|BI936373.1|BI936373 HVSMEa0019K09f Hordeum vulgare seedl... 110 3e-049
gb|BF259348.2|BF259348 HVSMEf0019F16f Hordeum vulgare seedl... 161 6e-049
gb|AV913364.1|AV913364 AV913364 K. Sato unpublished cDNA li... 192 3e-048
gb|AV918663.1|AV918663 AV918663 K. Sato unpublished cDNA li... 192 3e-048
gb|AL503330.1|AL503330 AL503330 Hordeum vulgare Barke roots... 189 3e-047
gb|BM817346.1|BM817346 HC111F01_T3.ab1 HC Hordeum vulgare s... 189 3e-047
gb|AV921748.1|AV921748 AV921748 K. Sato unpublished cDNA li... 187 1e-046
gb|BJ468231.1|BJ468231 BJ468231 K. Sato unpublished cDNA li... 187 1e-046
gb|BJ457207.1|BJ457207 BJ457207 K. Sato unpublished cDNA li... 154 2e-046
gb|AV918157.1|AV918157 AV918157 K. Sato unpublished cDNA li... 166 2e-045
gb|BQ662115.1|BQ662115 HR01K01u HR Hordeum vulgare subsp. v... 143 4e-045
gb|AV929439.1|AV929439 AV929439 K. Sato unpublished cDNA li... 142 6e-045
gb|AV916317.1|AV916317 AV916317 K. Sato unpublished cDNA li... 180 1e-044
gb|BI778623.2|BI778623 EBro07_SQ003_N10_R root, 3 week, red... 180 1e-044
gb|BJ468335.1|BJ468335 BJ468335 K. Sato unpublished cDNA li... 170 2e-044
gb|BJ466406.1|BJ466406 BJ466406 K. Sato unpublished cDNA li... 178 6e-044
gb|AV928262.1|AV928262 AV928262 K. Sato unpublished cDNA li... 138 1e-043
gb|BJ463550.1|BJ463550 BJ463550 K. Sato unpublished cDNA li... 155 7e-043
gb|BF253847.2|BF253847 HVSMEf0002E15f Hordeum vulgare seedl... 174 7e-043
gb|AV920383.1|AV920383 AV920383 K. Sato unpublished cDNA li... 134 1e-042
gb|BF264626.3|BF264626 HV_CEa0009O22f Hordeum vulgare seedl... 155 2e-042
gb|BJ468058.1|BJ468058 BJ468058 K. Sato unpublished cDNA li... 172 4e-042
gb|AV921351.1|AV921351 AV921351 K. Sato unpublished cDNA li... 170 1e-041
gb|BQ659524.1|BQ659524 HE01L03u HE Hordeum vulgare subsp. v... 150 5e-041
gb|CB879142.1|CB879142 HP11B09T HP Hordeum vulgare subsp. v... 167 1e-040
gb|AV918926.1|AV918926 AV918926 K. Sato unpublished cDNA li... 166 3e-040
gb|AV929534.1|AV929534 AV929534 K. Sato unpublished cDNA li... 166 3e-040
gb|CB879386.1|CB879386 HP02A07w HP Hordeum vulgare subsp. v... 164 1e-039
gb|BQ658222.1|BQ658222 HA05D15u HA Hordeum vulgare subsp. v... 115 2e-039
gb|CD662493.1|CD662493 UCRHV18_01ch06_b1 Drought-stressed D... 162 4e-039
gb|BF260928.2|BF260928 HVSMEf0023E24f Hordeum vulgare seedl... 161 7e-039
gb|AV918077.1|AV918077 AV918077 K. Sato unpublished cDNA li... 160 1e-038
gb|AV918703.1|AV918703 AV918703 K. Sato unpublished cDNA li... 160 1e-038
gb|BJ467944.1|BJ467944 BJ467944 K. Sato unpublished cDNA li... 160 2e-038
gb|CV060228.1|CV060228 BNEL55g8 Barley EST endosperm librar... 154 6e-038
gb|AV920613.1|AV920613 AV920613 K. Sato unpublished cDNA li... 157 9e-038
gb|BI777619.2|BI777619 EBro08_SQ001_A05_R root, 3 week, dro... 156 2e-037
gb|BF259414.3|BF259414 HVSMEf0019A18f Hordeum vulgare seedl... 155 3e-037
gb|BJ468232.1|BJ468232 BJ468232 K. Sato unpublished cDNA li... 155 6e-037
gb|BF256054.2|BF256054 HVSMEf0008J16f Hordeum vulgare seedl... 154 1e-036
gb|BG418608.1|BG418608 HVSMEk0023H12f Hordeum vulgare testa... 95 2e-035
gb|CD663904.1|CD663904 UCRHV18_07ab10_b1 Drought-stressed D... 106 1e-034
gb|BF254372.2|BF254372 HVSMEf0003M21f Hordeum vulgare seedl... 109 1e-034
gb|AV930320.1|AV930320 AV930320 K. Sato unpublished cDNA li... 144 1e-034
gb|CD662288.1|CD662288 UCRHV18_01aa10_b1 Drought-stressed D... 145 4e-034
gb|CD663812.1|CD663812 UCRHV18_06ch08_b1 Drought-stressed D... 145 4e-034
gb|AV931831.1|AV931831 AV931831 K. Sato unpublished cDNA li... 138 5e-033
gb|AV928022.1|AV928022 AV928022 K. Sato unpublished cDNA li... 138 5e-033
gb|CV055785.1|CV055785 BNEL123d8 Barley EST endosperm libra... 125 6e-033
gb|BQ765268.1|BQ765268 EBro03_SQ006_N17_R root, 3 week, wat... 106 1e-032
gb|BF257695.2|BF257695 HVSMEf0013J23f Hordeum vulgare seedl... 140 1e-032
gb|AV917949.1|AV917949 AV917949 K. Sato unpublished cDNA li... 140 2e-032
gb|AV930527.1|AV930527 AV930527 K. Sato unpublished cDNA li... 136 3e-032
gb|AV930452.1|AV930452 AV930452 K. Sato unpublished cDNA li... 138 6e-032
gb|BI778179.2|BI778179 EBro07_SQ002_H05_R root, 3 week, red... 136 2e-031
gb|AL504415.1|AL504415 AL504415 Hordeum vulgare Barke roots... 102 3e-031
gb|AV931697.1|AV931697 AV931697 K. Sato unpublished cDNA li... 133 3e-031
gb|AV930928.1|AV930928 AV930928 K. Sato unpublished cDNA li... 96 4e-031
gb|BF253960.2|BF253960 HVSMEf0002J18f Hordeum vulgare seedl... 96 5e-031
gb|AV928023.1|AV928023 AV928023 K. Sato unpublished cDNA li... 134 1e-030
gb|AL501392.1|AL501392 AL501392 Hordeum vulgare Barke roots... 133 2e-030
gb|BI949030.1|BI949030 HVSMEl0012B14f Hordeum vulgare spike... 86 2e-030
gb|BJ463768.1|BJ463768 BJ463768 K. Sato unpublished cDNA li... 133 3e-030
gb|BF253494.2|BF253494 HVSMEf0001B12f Hordeum vulgare seedl... 100 3e-030
gb|AV918876.1|AV918876 AV918876 K. Sato unpublished cDNA li... 128 5e-029
gb|BI957639.1|BI957639 HVSMEn0010H12f Hordeum vulgare rachi... 68 7e-029
gb|BF255884.2|BF255884 HVSMEf0008B14f Hordeum vulgare seedl... 91 1e-028
gb|BG310228.1|BG310228 HVSMEc0016J04f Hordeum vulgare seedl... 87 1e-028
gb|BQ662094.1|BQ662094 HR01I14u HR Hordeum vulgare subsp. v... 127 2e-028
gb|BE215581.1|BE215581 HV_CEb0008D04f Hordeum vulgare seedl... 124 2e-028
gb|AL450686.1|AL450686 AL450686 Hordeum vulgare Barke etiol... 124 8e-028
gb|CD662211.1|CD662211 UCRHV18_01af07_b1 Drought-stressed D... 121 9e-028
gb|CD663222.1|CD663222 UCRHV18_04db05_b1 Drought-stressed D... 124 1e-027
gb|AL502790.1|AL502790 AL502790 Hordeum vulgare Barke roots... 122 3e-027
gb|AL502883.1|AL502883 AL502883 Hordeum vulgare Barke roots... 122 3e-027
gb|AL504432.1|AL504432 AL504432 Hordeum vulgare Barke roots... 122 3e-027
gb|BI957415.1|BI957415 HVSMEn0009H02f Hordeum vulgare rachi... 111 1e-026
gb|BI957257.1|BI957257 HVSMEn0008H11f Hordeum vulgare rachi... 120 2e-026
gb|CD663459.1|CD663459 UCRHV18_05cc01_b1 Drought-stressed D... 119 4e-026
gb|BF253443.2|BF253443 HVSMEf0001G23f Hordeum vulgare seedl... 97 1e-025
gb|BI960616.1|BI960616 HVSMEn0025G07f Hordeum vulgare rachi... 107 2e-025
gb|BF260237.3|BF260237 HVSMEf0021H13f Hordeum vulgare seedl... 100 4e-025
gb|BF259032.2|BF259032 HVSMEf0017H09f Hordeum vulgare seedl... 115 5e-025
gb|CD663190.1|CD663190 UCRHV18_04cf12_b1 Drought-stressed D... 111 5e-025
gb|BI949226.1|BI949226 HVSMEl0012O03f Hordeum vulgare spike... 96 1e-024
gb|BI960224.1|BI960224 HVSMEn0023M14f Hordeum vulgare rachi... 107 1e-024
gb|AV931161.1|AV931161 AV931161 K. Sato unpublished cDNA li... 66 1e-024
gb|AL505122.1|AL505122 AL505122 Hordeum vulgare Barke roots... 103 3e-024
gb|AV927324.1|AV927324 AV927324 K. Sato unpublished cDNA li... 108 4e-024
gb|CD662527.1|CD662527 UCRHV18_02ba04_b1 Drought-stressed D... 108 4e-024
gb|BF258733.1|BF258733 HVSMEf0016I14f Hordeum vulgare seedl... 66 6e-024
gb|BI951913.1|BI951913 HVSMEm0003K22f Hordeum vulgare green... 95 9e-024
gb|BF260117.2|BF260117 HVSMEf0021C12f Hordeum vulgare seedl... 107 2e-023
gb|BF260521.2|BF260521 HVSMEf0022D17f Hordeum vulgare seedl... 68 3e-023
gb|CB879533.1|CB879533 HP02J21w HP Hordeum vulgare subsp. v... 109 3e-023
gb|BI956453.1|BI956453 HVSMEn0003H10f Hordeum vulgare rachi... 71 5e-023
gb|BF621230.2|BF621230 HVSMEa0006C03f Hordeum vulgare seedl... 97 7e-023
gb|CV054774.1|CV054774 BNEL113b6 Barley EST endosperm libra... 80 1e-022
gb|BI959736.1|BI959736 HVSMEn0021B08f Hordeum vulgare rachi... 107 1e-022
gb|AV926277.1|AV926277 AV926277 K. Sato unpublished cDNA li... 106 2e-022
gb|BF257709.1|BF257709 HVSMEf0013K13f Hordeum vulgare seedl... 95 2e-022
gb|BI949033.1|BI949033 HVSMEl0012B18f Hordeum vulgare spike... 100 4e-022
gb|AV917656.1|AV917656 AV917656 K. Sato unpublished cDNA li... 104 1e-021
gb|AV920163.1|AV920163 AV920163 K. Sato unpublished cDNA li... 104 1e-021
gb|AV930818.1|AV930818 AV930818 K. Sato unpublished cDNA li... 104 1e-021
gb|BJ466353.1|BJ466353 BJ466353 K. Sato unpublished cDNA li... 104 1e-021
gb|BJ466471.1|BJ466471 BJ466471 K. Sato unpublished cDNA li... 104 1e-021
gb|BJ466778.1|BJ466778 BJ466778 K. Sato unpublished cDNA li... 104 1e-021
gb|BJ468102.1|BJ468102 BJ468102 K. Sato unpublished cDNA li... 104 1e-021
gb|BQ471958.1|BQ471958 HV03P22r HV Hordeum vulgare subsp. v... 104 1e-021
gb|BQ472105.1|BQ472105 HV04G21r HV Hordeum vulgare subsp. v... 104 1e-021
gb|BG417465.1|BG417465 HVSMEk0017L14f Hordeum vulgare testa... 79 1e-021
gb|BF260366.2|BF260366 HVSMEf0021M22f Hordeum vulgare seedl... 74 2e-021
gb|AL505819.1|AL505819 AL505819 Hordeum vulgare Barke roots... 103 2e-021
gb|BF257029.2|BF257029 HVSMEf0011K17f Hordeum vulgare seedl... 103 2e-021
gb|BI949816.1|BI949816 HVSMEl0016D14f Hordeum vulgare spike... 97 3e-021
gb|BI960117.1|BI960117 HVSMEn0023E17f Hordeum vulgare rachi... 93 3e-021
gb|AL503073.1|AL503073 AL503073 Hordeum vulgare Barke roots... 102 5e-021
gb|AV836271.1|AV836271 AV836271 K. Sato unpublished cDNA li... 91 1e-020
>gb|AW982411.2|AW982411 HVSMEg0003D05f Hordeum vulgare pre-anthesis spike EST library
HVcDNA0008 (white to yellow anther) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEg0003D05f, mRNA sequence
Length = 1041
Score = 285 bits (617), Expect(3) = 8e-082
Identities = 114/206 (55%), Positives = 142/206 (68%)
Frame = -1 / +3
Query: 937 LLVGGSSSLAPFMSLVLHQVYVSPFLGLGTWLQHERSDPTLFEMTHGLTAWDLNDHKPAF 758
L+ S ++ P ++L L VS F LG W QH+ +P LF++ HG T W++ H AF
Sbjct: 114 LVSSASVNIVPVINLQLQPNIVSSFSELGAWFQHKLPEPDLFKLKHGKTFWEIAHHNAAF 293
Query: 757 GELFNQGMVCDSSFVMDIVVKECGDVFRGLSSLVDVXXXXXXXXXAISTAFPHVQCSVLD 578
+ N M DS F+MDI ++ECG VF G+ SLVDV AIS +FPH++CSV+D
Sbjct: 294 NTIVNDAMASDSRFLMDIAIRECGSVFEGIGSLVDVAGGHGGAAQAISKSFPHIKCSVMD 473
Query: 577 LPHVAANAPANTSVKYIAGDMFESIPPADAVFLKWVLHDWGDADCIKILKNCKKAIPSRD 398
L HV A AP+ T V+YIAGDMFESIP AD VFLKW++HDW D DCIKILKNC KAI +D
Sbjct: 474 LGHVIAGAPSGTDVQYIAGDMFESIPQADVVFLKWIMHDWSDDDCIKILKNCNKAIAPKD 653
Query: 397 AGGKVIIVDMVVGGQSSNIKHKETQV 320
AGGKVIIV+MVVGG ++KHKET V
Sbjct: 654 AGGKVIIVNMVVGGSPQDLKHKETPV 731
Score = 134 bits (287), Expect = 1e-030
Identities = 75/176 (42%), Positives = 83/176 (47%)
Frame = +3 / -3
Query: 396 ASLEGIAFLQFLSILIQSASPQSCKTHLRKTASAGGMLSNMSPAIYXXXXXXXXXXXXCG 575
AS IA LQF SIL+QS+S QSC H RKT SA GMLSNMSPA+Y
Sbjct: 655 ASFGAIALLQFFSILMQSSSLQSCIIHFRKTTSACGMLSNMSPAMYCTSVPLGAPAMTWP 476
Query: 576 RSRTLHWTCGNAVEIXXXXXXXXXXXXXXELRPRKTSPHSLTTMSMTKLLSQTIPWLKSS 755
RS TLH CGN +I E P KT PHSL MSM LS+ + L
Sbjct: 475 RSITLHLMCGNDFDIACAAPPWPPATSTREPIPSKTLPHSLMAMSMRNRLSEAMASLTMV 296
Query: 756 PKAGLWSFRSQAVSPCVISNRVGSERSCCNHVPRPRKGDT*TWCNTRDMKGARLEE 923
A LW SQ V PC R GS C N P K +T + R M G E
Sbjct: 295 LNAALWWAISQKVLPCFNLKRSGSGSLCWNQAPSSEKEETMLGWSCRLMTGTMFTE 128
Score = 129 bits (277), Expect = 2e-029
Identities = 56/119 (47%), Positives = 75/119 (63%)
Frame = +2 / -2
Query: 317 QDLSLFVLNV*RLASNNHINDYHLSSCIPGRYSFLTVLEYLDTISIAPVMQNPLKEDGVC 496
+D LFVL V + N+H+ +YHLS+ I SF+ + Y D + +AP+M NPL +D +C
Sbjct: 734 KDWGLFVLQVLGASPNHHVYNYHLSASIFWSDSFIAIF*YFDAVIVAPIMHNPL*KDNIC 555
Query: 497 RWNALKHVASNILDTGVSGSIGGDMREIQDTALDMRERGRDSQGRRAKPSGDVDKGAQT 673
WNALKHVA N+L G + S G DM E+ ALD+RER R R SG+VD+GA T
Sbjct: 554 LWNALKHVARNVLHVGATRSPGNDMAEVHHAALDVRERFRYCLCRPTMASGNVDQGAYT 378
Score = 102 bits (218), Expect = 3e-021
Identities = 58/114 (50%), Positives = 65/114 (57%)
Frame = -2 / +1
Query: 672 V*APLSTSPEGLARRPWLSRPRSRMSSAVSWISRMSPPMLPLTPVSSILLATCLRAFHRQ 493
V*AP ST PE + R R RSR SSA W S MS P L + P S L ATCLRAFHRQ
Sbjct: 379 V*APWSTLPEAMVGRHKQYRNRSRTSSAA*WTSAMSLPGLLVAPTCSTLRATCLRAFHRQ 558
Query: 492 TPSSLSGFCMTGAMLIVSRYSRTVRKLYLPGMQEER**SLIWLLEASRQTLSTK 331
S SG CM GA + S+Y + KL L M ER** W L + +T STK
Sbjct: 559 MLSF*SGLCMIGATMTASKY*KIAIKLSLQKMLAER**L*TWWLGEAPKT*STK 720
Score = 32.2 bits (64), Expect(3) = 8e-082
Identities = 13/21 (61%), Positives = 15/21 (71%)
Frame = -1 / +3
Query: 1042 RLMRVLTAAGIFSAAHRSPDD 980
RLMRVLT +G+FS SP D
Sbjct: 3 RLMRVLTVSGVFSVQQPSPRD 65
Score = 26.3 bits (51), Expect(3) = 8e-082
Identities = 13/23 (56%), Positives = 14/23 (60%)
Frame = -1 / +3
Query: 985 DDGGGELVYGLTPASQLLVGGSS 917
DD ELVY LT S LLV +S
Sbjct: 63 DDVQVELVYTLTAVSHLLVSSAS 131
>emb|X77467.1|HVOMET H.vulgare L. mRNA for flavonoid 7-O-methyltransferase
Length = 1402
Score = 182 bits (392), Expect(3) = 4e-079
Identities = 74/181 (40%), Positives = 108/181 (59%)
Frame = -1 / +1
Query: 841 QHERSDPTLFEMTHGLTAWDLNDHKPAFGELFNQGMVCDSSFVMDIVVKECGDVFRGLSS 662
+ + + T F + HG T + + F +FN+ M S FV + V+EC DVF G+ S
Sbjct: 547 EEQATTETPFMLAHGGTLYGIGGRDSEFNTVFNKAMGASSEFVAALAVRECRDVFAGIKS 726
Query: 661 LVDVXXXXXXXXXAISTAFPHVQCSVLDLPHVAANAPANTSVKYIAGDMFESIPPADAVF 482
LVDV I+ AFP+V+CSVLDLP V ++ +V+++AGDM E +PPA+AV
Sbjct: 727 LVDVAGGNGTTARTIAEAFPYVKCSVLDLPQVIQGISSHGTVEFVAGDMMEFVPPAEAVL 906
Query: 481 LKWVLHDWGDADCIKILKNCKKAIPSRDAGGKVIIVDMVVGGQSSNIKHKETQVLFDLFI 302
LK+VLH+W D DC+KIL C++AI + GKVII+D VVG S I + + + +
Sbjct: 907 LKYVLHNWSDQDCVKILTRCREAISHGEKAGKVIIIDTVVGSPSQQILESQVTMDLSMMM 1086
Query: 301 M 299
+
Sbjct: 1087 L 1089
Score = 95.9 bits (203), Expect(3) = 4e-079
Identities = 41/85 (48%), Positives = 59/85 (69%)
Frame = -1 / +1
Query: 1222 LLDAQLELWHTSFAFIKSMALKSAVDLGIADAIHSHGGNATLPQIVSRAALHPSKIPCLR 1043
+L A+ EL+ SF ++KSMAL+S V L I D +H +GG A+LP+++S +HP+K+P L
Sbjct: 139 ILQAEAELFCHSFGYLKSMALQSVVKLRIPDVLHRYGGAASLPELLSTVPIHPNKLPYLP 318
Query: 1042 RLMRVLTAAGIFSAAHRSPDDGGGE 968
RLM++L AAGIF+A G GE
Sbjct: 319 RLMKMLAAAGIFTAEDVPATVGDGE 393
Score = 63.4 bits (132), Expect(3) = 4e-079
Identities = 28/49 (57%), Positives = 33/49 (67%)
Frame = -1 / +1
Query: 304 IMTINGAERDEHEWKKIISEAGFSDYKIIPVLGVRSIIEVYP*LFGEYV 158
+M NG R+E W KI EAGFS YKI VLG+RS+IEV P*L Y+
Sbjct: 1081 MMLFNGKVREEQNWHKIFLEAGFSHYKIHNVLGMRSLIEVQP*LVQAYL 1227
Score = 52.4 bits (108), Expect(4) = 2e-022
Identities = 22/60 (36%), Positives = 35/60 (58%)
Frame = +2 / -2
Query: 359 SNNHINDYHLSSCIPGRYSFLTVLEYLDTISIAPVMQNPLKEDGVCRWNALKHVASNILD 538
SN+ ++DYH +S + T +YL + I PVMQ+ L+++ W+ L HV SN L+
Sbjct: 1029 SNHRVDDYHFTSFLSVGDGLPTSCQYLHAVLITPVMQHILEKNSFSGWHELHHVTSNKLN 850
Score = 49.2 bits (101), Expect(4) = 2e-022
Identities = 25/44 (56%), Positives = 29/44 (65%)
Frame = +3 / -3
Query: 162 YSPNNHG*TSMMDRTPRTGMIL*SLNPASEIIFFHSCSSRSAPL 293
Y+ ++G TSM DR PRT IL* LNPAS I CSSR+ PL
Sbjct: 1223 YAWTSYGWTSMRDRIPRTL*IL**LNPASRNILCQFCSSRTLPL 1092
Score = 40.5 bits (82), Expect(4) = 2e-022
Identities = 29/74 (39%), Positives = 36/74 (48%)
Frame = +3 / -3
Query: 999 AALKMPAAVSTRMRRRRQGILDGWSAALETIWGRVALPPWLWMASAIPRSTADLRAMDLM 1178
+A+K+PAA S M R R G L G +E G A PP S I T AMDL
Sbjct: 362 SAVKIPAAASIFMSRGR*GSLFGCIGTVERSSGNEAAPP*RCRTSGILSFTTLCSAMDLR 183
Query: 1179 KAKDVCQSSS*ASS 1220
K+ +SS+ A S
Sbjct: 182 *PKEWQKSSASACS 141
Score = 27.6 bits (54), Expect(4) = 2e-022
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = +2 / -2
Query: 575 EIQDTALDMRERGRDSQGRRAKPSGDVDK 661
EIQ ALD+RE D G A P+ +V++
Sbjct: 813 EIQHGALDIRESLGDGSGGGAVPTSNVNE 727
>gb|BG343272.2|BG343272 HVSMEg0005E13f Hordeum vulgare pre-anthesis spike EST library
HVcDNA0008 (white to yellow anther) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEg0005E13f, mRNA sequence
Length = 992
Score = 158 bits (340), Expect(3) = 2e-076
Identities = 64/146 (43%), Positives = 88/146 (60%)
Frame = -1 / +2
Query: 937 LLVGGSSSLAPFMSLVLHQVYVSPFLGLGTWLQHERSDPTLFEMTHGLTAWDLNDHKPAF 758
L+ S ++ P ++L L VS F LG W QH+ +P LF++ HG T W++ H AF
Sbjct: 356 LVSSASVNIVPVINLQLQPNIVSSFSELGAWFQHKLPEPDLFKLKHGXTFWEIAHHNAAF 535
Query: 757 GELFNQGMVCDSSFVMDIVVKECGDVFRGLSSLVDVXXXXXXXXXAISTAFPHVQCSVLD 578
+ N M DS +MDI ++ECG VF G+ SL DV AIS +FPH++CSV+D
Sbjct: 536 NTIVNDAMASDSRXLMDIAIRECGSVFEGIXSLXDVAGSHGWAAQAISKSFPHIKCSVMD 715
Query: 577 LPHVAANAPANTSVKYIAGDMFESIP 500
HV A AP+ T V+YIAG++ ES P
Sbjct: 716 PRHVIARAPSGTDVQYIAGELVESXP 793
Score = 140 bits (301), Expect(3) = 2e-076
Identities = 60/83 (72%), Positives = 66/83 (79%)
Frame = -1 / +2
Query: 1228 QALLDAQLELWHTSFAFIKSMALKSAVDLGIADAIHSHGGNATLPQIVSRAALHPSKIPC 1049
Q LLDAQLELWH SF ++KSMALKS +DLGIADAIH HGG ATL QI + A LHPSKI C
Sbjct: 59 QGLLDAQLELWHISFGYVKSMALKSCLDLGIADAIHHHGGAATLSQIGAVATLHPSKICC 238
Query: 1048 LRRLMRVLTAAGIFSAAHRSPDD 980
LRRLMRVLT +G+FS SP D
Sbjct: 239 LRRLMRVLTVSGVFSVQQPSPRD 307
Score = 116 bits (249), Expect(2) = 8e-045
Identities = 50/73 (68%), Positives = 55/73 (75%)
Frame = +3 / -3
Query: 1005 LKMPAAVSTRMRRRRQGILDGWSAALETIWGRVALPPWLWMASAIPRSTADLRAMDLMKA 1184
LK P VSTR+RRRRQ ILDGWS A IW RVA PPW WMASA+PRS D A+DL
Sbjct: 282 LKTPETVSTRIRRRRQQILDGWSVATAPIWERVAAPPWWWMASAMPRSKQDFSAIDLT*P 103
Query: 1185 KDVCQSSS*ASSK 1223
K++CQSSS*ASSK
Sbjct: 102 KEMCQSSS*ASSK 64
Score = 84.5 bits (178), Expect(2) = 8e-045
Identities = 51/141 (36%), Positives = 57/141 (40%)
Frame = +3 / -3
Query: 501 GMLSNMSPAIYXXXXXXXXXXXXCGRSRTLHWTCGNAVEIXXXXXXXXXXXXXXELRPRK 680
GMLS SPA+Y S TLH CGN +I E P K
Sbjct: 792 GMLSTSSPAMYCTSVPLGARAMTWRGSITLHLMCGNDFDIACAAHPWLPATSXREXIPSK 613
Query: 681 TSPHSLTTMSMTKLLSQTIPWLKSSPKAGLWSFRSQAVSPCVISNRVGSERSCCNHVPRP 860
T PHSL MSM LS+ + L A LW SQ V PC R GS C N P
Sbjct: 612 TLPHSLMAMSMRXRLSEAMASLTMVLNAALWWAISQKVXPCFNLKRSGSGSLCWNQAPSS 433
Query: 861 RKGDT*TWCNTRDMKGARLEE 923
K +T + R M G E
Sbjct: 432 EKEETMLGWSCRLMTGTMFTE 370
Score = 26.3 bits (51), Expect(3) = 2e-076
Identities = 13/23 (56%), Positives = 14/23 (60%)
Frame = -1 / +2
Query: 985 DDGGGELVYGLTPASQLLVGGSS 917
DD ELVY LT S LLV +S
Sbjct: 305 DDVQVELVYTLTAVSHLLVSSAS 373
>gb|BF259471.1|BF259471 HVSMEf0019D06f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEf0019D06f, mRNA sequence
Length = 587
Score = 280 bits (605), Expect = 1e-074
Identities = 110/195 (56%), Positives = 142/195 (72%)
Frame = -1 / +1
Query: 814 FEMTHGLTAWDLNDHKPAFGELFNQGMVCDSSFVMDIVVKECGDVFRGLSSLVDVXXXXX 635
F+ HGLT W++ D ++ + N MV DS+F+MDI+++ECGDVF G++SL+DV
Sbjct: 1 FKKAHGLTFWEMADQNDSYNQSINNAMVSDSNFLMDIIMRECGDVFVGINSLIDVAGGHG 180
Query: 634 XXXXAISTAFPHVQCSVLDLPHVAANAPANTSVKYIAGDMFESIPPADAVFLKWVLHDWG 455
AI+ AFP ++C+VLDLPHV A AP N V +I+GDMF+ IPPADA+FLKWV HDWG
Sbjct: 181 GAARAIAKAFPQMKCTVLDLPHVVAEAPTNDHVSFISGDMFKYIPPADALFLKWVFHDWG 360
Query: 454 DADCIKILKNCKKAIPSRDAGGKVIIVDMVVGGQSSNIKHKETQVLFDLFIMTINGAERD 275
D DC+KILK CK+AIP RDAGGKVIIV+MVVG I +ETQV DLFIM + G ER+
Sbjct: 361 DEDCVKILKKCKEAIPPRDAGGKVIIVNMVVGSGPDEIVTRETQVXCDLFIMFLGGVERE 540
Query: 274 EHEWKKIISEAGFSD 230
E E K + +AGF++
Sbjct: 541 EFEVKNLFMQAGFTE 585
Score = 122 bits (260), Expect(2) = 5e-031
Identities = 64/135 (47%), Positives = 70/135 (51%)
Frame = +3 / -1
Query: 396 ASLEGIAFLQFLSILIQSASPQSCKTHLRKTASAGGMLSNMSPAIYXXXXXXXXXXXXCG 575
ASL GIA L F SIL QS+SPQS KTH R ASAGGM N+SP I G
Sbjct: 419 ASLGGIASLHFFSILTQSSSPQSWKTHFRXRASAGGMYLNISPEINDTWSLVGASATT*G 240
Query: 576 RSRTLHWTCGNAVEIXXXXXXXXXXXXXXELRPRKTSPHSLTTMSMTKLLSQTIPWLKSS 755
RS T+H+ CGNA I E P TSPHSL +SM KLLS+TI L
Sbjct: 239 RSNTVHFICGNAFAIALAAPPWPPATSISEFIPTNTSPHSLMMISMRKLLSETIALLID* 60
Query: 756 PKAGLWSFRSQAVSP 800
WS SQ V P
Sbjct: 59 L*ESFWSAISQKVRP 15
Score = 118 bits (252), Expect = 7e-026
Identities = 54/139 (38%), Positives = 77/139 (55%)
Frame = +2 / -3
Query: 257 LFPLMFVSLGAIDRHDEEIKQDLSLFVLNV*RLASNNHINDYHLSSCIPGRYSFLTVLEY 436
+F +SL ++HD++I +L N+ SN+H+ DYH + I GR S L Y
Sbjct: 558 IFHFELLSLNPSEKHDKQITXNLRFSCNNLIWPRSNHHVYDYHFPTSISGRDSLLAFF*Y 379
Query: 437 LDTISIAPVMQNPLKEDGVCRWNALKHVASNILDTGVSGSIGGDMREIQDTALDMRERGR 616
LDT+ I P+M+NPL+E + RWN L+H+A N VSGS +MREIQ A +RE R
Sbjct: 378 LDTVFITPIMENPLQEXSIRRWNVLEHIARNKRHMVVSGSFCNNMREIQHCAFHLRECLR 199
Query: 617 DSQGRRAKPSGDVDKGAQT 673
+ G D++K T
Sbjct: 198 NCPGSSTMAPSDINKRVYT 142
Score = 33.1 bits (66), Expect(2) = 5e-031
Identities = 19/35 (54%), Positives = 21/35 (60%)
Frame = +3 / -1
Query: 231 SLNPASEIIFFHSCSSRSAPLIVMMKRSNKT*VSL 335
S+NPA FF S SSRS P M+ RS T VSL
Sbjct: 584 SVNPACMNKFFTSNSSRSTPPRNMINRSQXTCVSL 480
>gb|BI956571.1|BI956571 HVSMEn0004D06f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0004D06f, mRNA sequence
Length = 780
Score = 244 bits (528), Expect(3) = 6e-073
Identities = 100/193 (51%), Positives = 125/193 (64%)
Frame = -1 / +3
Query: 937 LLVGGSSSLAPFMSLVLHQVYVSPFLGLGTWLQHERSDPTLFEMTHGLTAWDLNDHKPAF 758
L+ S ++ P ++L L VS F LG W QH+ +P LF++ HG T W++ H AF
Sbjct: 132 LVSSASVNIVPVINLQLQPNIVSSFSELGAWFQHKLPEPDLFKLKHGKTFWEIAHHNAAF 311
Query: 757 GELFNQGMVCDSSFVMDIVVKECGDVFRGLSSLVDVXXXXXXXXXAISTAFPHVQCSVLD 578
+ N M DS F+MDI ++ECG VF G+ SLVDV AIS +FPH++CSV+D
Sbjct: 312 NTIVNDAMASDSRFLMDIAIRECGSVFEGIGSLVDVAGGHGGAAQAISKSFPHIKCSVMD 491
Query: 577 LPHVAANAPANTSVKYIAGDMFESIPPADAVFLKWVLHDWGDADCIKILKNCKKAIPSRD 398
L HV A AP+ T V+YIAGDMFESIP AD VFLKW++HDW D DCIKILKNC K +
Sbjct: 492 LGHVIAGAPSGTDVQYIAGDMFESIPQADVVFLKWIMHDWSDDDCIKILKNCIKLSLQKM 671
Query: 397 AGGKVIIVDMVVG 359
GKVIIV VG
Sbjct: 672 LAGKVIIVXWWVG 710
Score = 130 bits (278), Expect(2) = 3e-033
Identities = 71/170 (41%), Positives = 81/170 (47%)
Frame = +3 / -3
Query: 414 AFLQFLSILIQSASPQSCKTHLRKTASAGGMLSNMSPAIYXXXXXXXXXXXXCGRSRTLH 593
+F+QF SIL+QS+S QSC H RKT SA GMLSNMSPA+Y RS TLH
Sbjct: 655 SFMQFFSILMQSSSLQSCIIHFRKTTSACGMLSNMSPAMYCTSVPLGAPAMTWPRSITLH 476
Query: 594 WTCGNAVEIXXXXXXXXXXXXXXELRPRKTSPHSLTTMSMTKLLSQTIPWLKSSPKAGLW 773
CGN +I E P KT PHSL MSM LS+ + L A LW
Sbjct: 475 LMCGNDFDIACAAPPWPPATSTREPIPSKTLPHSLMAMSMRNRLSEAMASLTMVLNAALW 296
Query: 774 SFRSQAVSPCVISNRVGSERSCCNHVPRPRKGDT*TWCNTRDMKGARLEE 923
SQ V PC R GS C N P K +T + R M G E
Sbjct: 295 WAISQKVLPCFNLKRSGSGSLCWNQAPSSEKEETMLGWSCRLMTGTMFTE 146
Score = 101 bits (216), Expect = 6e-021
Identities = 42/80 (52%), Positives = 52/80 (65%)
Frame = +2 / -2
Query: 434 YLDTISIAPVMQNPLKEDGVCRWNALKHVASNILDTGVSGSIGGDMREIQDTALDMRERG 613
Y D + +AP+M NPL ED +C WNALKHVA N+L G + S G DM E+ ALD+RER
Sbjct: 635 YFDAVIVAPIMHNPL*EDNICLWNALKHVARNVLHVGATRSPGNDMAEVHHAALDVRERF 456
Query: 614 RDSQGRRAKPSGDVDKGAQT 673
R R SG+VD+GA T
Sbjct: 455 RYCLCRPTMASGNVDQGAYT 396
Score = 43.2 bits (88), Expect(3) = 6e-073
Identities = 18/27 (66%), Positives = 20/27 (74%)
Frame = -1 / +3
Query: 1060 KIPCLRRLMRVLTAAGIFSAAHRSPDD 980
KI CLRRLMRVLT +G+FS SP D
Sbjct: 3 KICCLRRLMRVLTVSGVFSVQQPSPRD 83
Score = 32.2 bits (64), Expect(2) = 3e-033
Identities = 14/19 (73%), Positives = 15/19 (78%)
Frame = +3 / -3
Query: 1005 LKMPAAVSTRMRRRRQGIL 1061
LK P VSTR+RRRRQ IL
Sbjct: 58 LKTPETVSTRIRRRRQQIL 2
Score = 26.3 bits (51), Expect(3) = 6e-073
Identities = 13/23 (56%), Positives = 14/23 (60%)
Frame = -1 / +3
Query: 985 DDGGGELVYGLTPASQLLVGGSS 917
DD ELVY LT S LLV +S
Sbjct: 81 DDVQVELVYTLTAVSHLLVSSAS 149
>gb|BM817329.1|BM817329 HC105E06_T3.ab1 HC Hordeum vulgare subsp. vulgare cDNA clone
HC105E06_T3.ab1 similar to Hexaprenyldihydroxybenzoate
methyltransferase,(S)-scoulerine 9-O-methyltransferase,
mRNA sequence
Length = 885
Score = 171 bits (369), Expect(4) = 9e-069
Identities = 67/103 (65%), Positives = 80/103 (77%)
Frame = -1 / +3
Query: 667 SSLVDVXXXXXXXXXAISTAFPHVQCSVLDLPHVAANAPANTSVKYIAGDMFESIPPADA 488
SSL+DV I+ AFPHV+C+VLDLP V A APA+ +V ++ GDMFE IPPAD
Sbjct: 291 SSLIDVGGAHGTATAIIAKAFPHVKCTVLDLPRVVAGAPAHDNVIFVPGDMFEYIPPADT 470
Query: 487 VFLKWVLHDWGDADCIKILKNCKKAIPSRDAGGKVIIVDMVVG 359
V LKW+LHDW D DCIK+L+ CKKAIP+RDAGGKVII+DMVVG
Sbjct: 471 VLLKWILHDWPDDDCIKVLRQCKKAIPARDAGGKVIIMDMVVG 599
Score = 88.1 bits (186), Expect(3) = 9e-029
Identities = 33/57 (57%), Positives = 44/57 (77%)
Frame = +2 / -2
Query: 359 SNNHINDYHLSSCIPGRYSFLTVLEYLDTISIAPVMQNPLKEDGVCRWNALKHVASN 529
SN+HI+DYHL S +P R FL + +YLD I + P++QNPL+ +GVCRW+ LKHVA N
Sbjct: 599 SNHHIHDYHLPSRVPCRDGFLALTQYLDAIVVWPIVQNPLE*NGVCRWDVLKHVARN 429
Score = 66.6 bits (139), Expect(4) = 9e-069
Identities = 25/47 (53%), Positives = 33/47 (70%)
Frame = -1 / +3
Query: 358 GQSSNIKHKETQVLFDLFIMTINGAERDEHEWKKIISEAGFSDYKII 218
G KE +V FD+F+M I+G +R+EHEW+KI AGFSDYKI+
Sbjct: 606 GPQQETVSKEAEVXFDVFMMYIDGIQREEHEWRKIFLXAGFSDYKIL 746
Score = 53.3 bits (110), Expect(4) = 9e-069
Identities = 21/53 (39%), Positives = 29/53 (54%)
Frame = -1 / +3
Query: 820 TLFEMTHGLTAWDLNDHKPAFGELFNQGMVCDSSFVMDIVVKECGDVFRGLSS 662
+LFE+ HG T W++ LFN M DS M I++KEC +VF + S
Sbjct: 135 SLFEVAHGCTRWEMIAKDAGDDRLFNASMAADSCLTMGILLKECNNVFGSIGS 293
Score = 49.2 bits (101), Expect(3) = 9e-029
Identities = 22/34 (64%), Positives = 25/34 (73%)
Frame = +3 / -3
Query: 222 IL*SLNPASEIIFFHSCSSRSAPLIVMMKRSNKT 323
IL*SLNPA + IF HSCSSR P + +MK SN T
Sbjct: 742 IL*SLNPAXKKIFLHSCSSRWIPSMYIMKTSNXT 641
Score = 28.1 bits (55), Expect(3) = 9e-029
Identities = 15/36 (41%), Positives = 20/36 (55%)
Frame = +2 / -2
Query: 554 SIGGDMREIQDTALDMRERGRDSQGRRAKPSGDVDK 661
S G D RE+Q ALD+ E D + A + DVD+
Sbjct: 404 SSGDDAREVQHGALDVWECLGDDRSSGAVGATDVDQ 297
Score = 26.7 bits (52), Expect(4) = 9e-069
Identities = 10/12 (83%), Positives = 12/12 (100%)
Frame = -1 / +2
Query: 208 GVRSIIEVYP*L 173
G+RSIIEVYP*+
Sbjct: 758 GIRSIIEVYP*I 793
>gb|AV836790.1|AV836790 AV836790 K. Sato unpublished cDNA library: Hordeum vulgare subsp.
vulgare seedling leaves second leaf stage Hordeum
vulgare subsp. vulgare cDNA clone basd3c22, mRNA
sequence
Length = 696
Score = 157 bits (337), Expect(3) = 3e-067
Identities = 63/87 (72%), Positives = 72/87 (82%)
Frame = -1 / -2
Query: 619 ISTAFPHVQCSVLDLPHVAANAPANTSVKYIAGDMFESIPPADAVFLKWVLHDWGDADCI 440
I+ AFPHV+C+VLDLP V A APA +V ++ GDMFESIPPAD V LK +LHDW D DCI
Sbjct: 530 IAKAFPHVKCTVLDLPRVVAGAPALDNVIFVPGDMFESIPPADTVLLKCILHDWPDEDCI 351
Query: 439 KILKNCKKAIPSRDAGGKVIIVDMVVG 359
KIL+ CKKAIP RDAGGKVII+DMVVG
Sbjct: 350 KILRQCKKAIPVRDAGGKVIIMDMVVG 270
Score = 98.7 bits (209), Expect(3) = 3e-067
Identities = 39/62 (62%), Positives = 48/62 (77%)
Frame = -1 / -2
Query: 358 GQSSNIKHKETQVLFDLFIMTINGAERDEHEWKKIISEAGFSDYKIIPVLGVRSIIEVYP 179
G KE +VLFD+F+M I+G +R+EHEW+KI EAGFSDYKI PV G+RSIIEVYP
Sbjct: 263 GPQQETVSKEAEVLFDVFMMYIDGIQREEHEWRKIFFEAGFSDYKITPVTGIRSIIEVYP 84
Query: 178 *L 173
*+
Sbjct: 83 *I 78
Score = 88.1 bits (186), Expect(2) = 2e-032
Identities = 41/73 (56%), Positives = 46/73 (63%)
Frame = +3 / +1
Query: 396 ASLEGIAFLQFLSILIQSASPQSCKTHLRKTASAGGMLSNMSPAIYXXXXXXXXXXXXCG 575
ASL G+AFL SIL+QS+S QSCK HL KT SAGGM SNMSP G
Sbjct: 307 ASLTGMAFLH*RSILMQSSSGQSCKMHLSKTVSAGGMDSNMSPGTKITLSRAGAPATTRG 486
Query: 576 RSRTLHWTCGNAV 614
RS T+H TCGNA+
Sbjct: 487 RSSTVHLTCGNAL 525
Score = 76.7 bits (161), Expect(3) = 1e-023
Identities = 29/57 (50%), Positives = 43/57 (75%)
Frame = +2 / +3
Query: 359 SNNHINDYHLSSCIPGRYSFLTVLEYLDTISIAPVMQNPLKEDGVCRWNALKHVASN 529
+++HI+DYHLSS +P R FL + +YLD I + P+MQN L+ +GV RW+ L+HVA +
Sbjct: 270 TDHHIHDYHLSSSVPYRDGFLALTQYLDAIFVWPIMQNALE*NGVRRWDGLEHVAGD 440
Score = 72.1 bits (151), Expect(2) = 2e-032
Identities = 32/48 (66%), Positives = 39/48 (81%)
Frame = +3 / +1
Query: 180 G*TSMMDRTPRTGMIL*SLNPASEIIFFHSCSSRSAPLIVMMKRSNKT 323
G*TS+++R P TG+IL*SLNPAS+ IF HSCSSR P + +MK SNKT
Sbjct: 85 G*TSIIERIPVTGVIL*SLNPASKKIFLHSCSSRWIPSMYIMKTSNKT 228
Score = 48.3 bits (99), Expect(3) = 1e-023
Identities = 23/50 (46%), Positives = 33/50 (66%)
Frame = +2 / +3
Query: 182 VDLDDGSNT*NGYDFVVAKSSFGNYLFPLMFVSLGAIDRHDEEIKQDLSL 331
VD ++ +N +G + VVAK SF L PLM +SL +D H E+I+Q+L L
Sbjct: 87 VDFNN*ANPGHGSNLVVAKPSFKENLPPLMLLSLDPVDVHHEDIEQNLRL 236
Score = 39.1 bits (79), Expect(3) = 3e-067
Identities = 15/33 (45%), Positives = 20/33 (60%)
Frame = -1 / -1
Query: 760 FGELFNQGMVCDSSFVMDIVVKECGDVFRGLSS 662
+ LFN GM DS M I++KEC +VF + S
Sbjct: 675 YDRLFNAGMAADSHLSMGILLKECNNVFGSMGS 577
Score = 23.1 bits (44), Expect(3) = 1e-023
Identities = 10/18 (55%), Positives = 12/18 (66%)
Frame = +2 / +3
Query: 554 SIGGDMREIQDTALDMRE 607
S G D RE+Q ALD+ E
Sbjct: 465 SSGDDAREVQHGALDVWE 518
>gb|BF628874.2|BF628874 HVSMEb0009A12f Hordeum vulgare seedling shoot EST library
HVcDNA0002 (Dehydration stress) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEb0009A12f, mRNA sequence
Length = 875
Score = 246 bits (532), Expect = 2e-064
Identities = 99/132 (75%), Positives = 111/132 (84%)
Frame = -1 / +2
Query: 562 ANAPANTSVKYIAGDMFESIPPADAVFLKWVLHDWGDADCIKILKNCKKAIPSRDAGGKV 383
A AP+ T V+YIAGDMFESIP AD VFLKW++HDW D DCIKILKNC KAI +DAGGKV
Sbjct: 8 AGAPSGTDVQYIAGDMFESIPQADVVFLKWIMHDWSDDDCIKILKNCNKAIAPKDAGGKV 187
Query: 382 IIVDMVVGGQSSNIKHKETQVLFDLFIMTINGAERDEHEWKKIISEAGFSDYKIIPVLGV 203
IIVDMVVGG ++KHKETQVLFDL+IM +NG ERDE EWKKII AGFSD+KI P+LGV
Sbjct: 188 IIVDMVVGGGPQDLKHKETQVLFDLYIMLLNGIERDEQEWKKIIMAAGFSDFKITPILGV 367
Query: 202 RSIIEVYP*LFG 167
RSIIE+YP* G
Sbjct: 368 RSIIELYP*TSG 403
Score = 145 bits (312), Expect = 4e-034
Identities = 63/129 (48%), Positives = 86/129 (66%)
Frame = +2 / -2
Query: 176 SWVDLDDGSNT*NGYDFVVAKSSFGNYLFPLMFVSLGAIDRHDEEIKQDLSLFVLNV*RL 355
S V L+D S+T N DF V +S +YL PL+ +S AI+ HD +I+QDL LFVL V R
Sbjct: 394 SRVKLND*SDTQNRGDFEVTESCRHDYLLPLLLISFDAIEEHDVKIEQDLCLFVLQVLRA 215
Query: 356 ASNNHINDYHLSSCIPGRYSFLTVLEYLDTISIAPVMQNPLKEDGVCRWNALKHVASNIL 535
++N+H+ +YHLS+ I SF+ + Y D + +AP+M NPL ED +C WNALKHVA N+L
Sbjct: 214 STNHHVYNYHLSASIFWSDSFIAIF*YFDAVIVAPIMHNPL*EDNICLWNALKHVARNVL 35
Query: 536 DTGVSGSIG 562
G + S G
Sbjct: 34 HVGATRSPG 8
Score = 128 bits (274), Expect = 6e-029
Identities = 65/122 (53%), Positives = 78/122 (63%)
Frame = -3 / +1
Query: 533 VYCWRHV*EHSTGRRRLP*VGFA*LGRC*LYQDTQEL*ESYTFQGCRRKGDNR*YGCWRP 354
V+C RHV*EHSTGR LP V +A*L R *L+Q+T++L SY + C RKGDN +G W
Sbjct: 37 VHCGRHV*EHSTGRCCLPKVDYA*LERR*LHQNTKKLQ*SYRSKRCWRKGDNCRHGGWWR 216
Query: 353 VVKH*AQRDSGLV*SLHHDDQWRRARRT*VEKDNFRSWI*RLQNHTRSRCSIHHRGLPMI 174
+ AQRD+ LV SLHH QW R R VE+DN I LQNH S C I+H LP+
Sbjct: 217 PARPEAQRDTSLVRSLHHAPQWHRTR*AGVEEDNHGGRIQ*LQNHPDSGCPINH*ALPVN 396
Query: 173 IW 168
IW
Sbjct: 397 IW 402
Score = 96.4 bits (204), Expect(2) = 1e-034
Identities = 43/57 (75%), Positives = 48/57 (84%)
Frame = +3 / -3
Query: 168 PNNHG*TSMMDRTPRTGMIL*SLNPASEIIFFHSCSSRSAPLIVMMKRSNKT*VSLC 338
P+ HG*+SM+DRTPR G+IL SLNPA+ IIFFHSCSSRS PL MM RSNKT VSLC
Sbjct: 402 PDVHG*SSMIDRTPRIGVILKSLNPAAMIIFFHSCSSRSMPLRSMM*RSNKTCVSLC 232
Score = 70.7 bits (148), Expect(2) = 1e-034
Identities = 32/46 (69%), Positives = 35/46 (76%)
Frame = +3 / -3
Query: 396 ASLEGIAFLQFLSILIQSASPQSCKTHLRKTASAGGMLSNMSPAIY 533
AS IA LQF SIL+QS+S QSC H RKT SA GMLSNMSPA+Y
Sbjct: 174 ASFGAIALLQFFSILMQSSSLQSCIIHFRKTTSACGMLSNMSPAMY 37
>gb|BI960501.1|BI960501 HVSMEn0024N01f Hordeum vulgare rachis EST library HVcDNA0015 (normal)
Hordeum vulgare subsp. vulgare cDNA clone HVSMEn0024N01f,
mRNA sequence
Length = 660
Score = 140 bits (301), Expect(3) = 6e-061
Identities = 60/83 (72%), Positives = 66/83 (79%)
Frame = -1 / +2
Query: 1228 QALLDAQLELWHTSFAFIKSMALKSAVDLGIADAIHSHGGNATLPQIVSRAALHPSKIPC 1049
Q LLDAQLELWH SF ++KSMALKS +DLGIADAIH HGG ATL QI + A LHPSKI C
Sbjct: 53 QGLLDAQLELWHISFGYVKSMALKSCLDLGIADAIHHHGGAATLSQIGAVATLHPSKICC 232
Query: 1048 LRRLMRVLTAAGIFSAAHRSPDD 980
LRRLMRVLT +G+FS SP D
Sbjct: 233 LRRLMRVLTVSGVFSVQQPSPRD 301
Score = 116 bits (249), Expect(2) = 3e-037
Identities = 50/73 (68%), Positives = 55/73 (75%)
Frame = +3 / -1
Query: 1005 LKMPAAVSTRMRRRRQGILDGWSAALETIWGRVALPPWLWMASAIPRSTADLRAMDLMKA 1184
LK P VSTR+RRRRQ ILDGWS A IW RVA PPW WMASA+PRS D A+DL
Sbjct: 276 LKTPETVSTRIRRRRQQILDGWSVATAPIWERVAAPPWWWMASAMPRSKQDFSAIDLT*P 97
Query: 1185 KDVCQSSS*ASSK 1223
K++CQSSS*ASSK
Sbjct: 96 KEMCQSSS*ASSK 58
Score = 106 bits (227), Expect(3) = 6e-061
Identities = 42/96 (43%), Positives = 58/96 (60%)
Frame = -1 / +2
Query: 937 LLVGGSSSLAPFMSLVLHQVYVSPFLGLGTWLQHERSDPTLFEMTHGLTAWDLNDHKPAF 758
L+ S ++ P ++L L VS F LG W QH+ +P LF++ HG T W++ H AF
Sbjct: 350 LVSSASVNIVPVINLQLQPNIVSSFSELGAWFQHKLPEPDLFKLKHGKTFWEIAHHNAAF 529
Query: 757 GELFNQGMVCDSSFVMDIVVKECGDVFRGLSSLVDV 650
+ N M DS F+MDI ++ECG VF G+ SLVDV
Sbjct: 530 NTIVNDAMASDSRFLMDIAIRECGSVFXGIGSLVDV 637
Score = 59.3 bits (123), Expect(2) = 3e-037
Identities = 33/84 (39%), Positives = 37/84 (44%)
Frame = +3 / -1
Query: 672 PRKTSPHSLTTMSMTKLLSQTIPWLKSSPKAGLWSFRSQAVSPCVISNRVGSERSCCNHV 851
P KT PHSL MSM LS+ + L A LW SQ V PC R GS C N
Sbjct: 615 PXKTLPHSLMAMSMRNRLSEAMASLTMVLNAALWWAISQKVLPCFNLKRSGSGSLCWNQA 436
Query: 852 PRPRKGDT*TWCNTRDMKGARLEE 923
P K +T + R M G E
Sbjct: 435 PSSEKEETMLGWSCRLMTGTMFTE 364
Score = 26.3 bits (51), Expect(3) = 6e-061
Identities = 13/23 (56%), Positives = 14/23 (60%)
Frame = -1 / +2
Query: 985 DDGGGELVYGLTPASQLLVGGSS 917
DD ELVY LT S LLV +S
Sbjct: 299 DDVQVELVYTLTAVSHLLVSSAS 367
>gb|BI957606.1|BI957606 HVSMEn0010F15f Hordeum vulgare rachis EST library HVcDNA0015 (normal)
Hordeum vulgare subsp. vulgare cDNA clone HVSMEn0010F15f,
mRNA sequence
Length = 648
Score = 140 bits (301), Expect(3) = 6e-061
Identities = 60/83 (72%), Positives = 66/83 (79%)
Frame = -1 / +3
Query: 1228 QALLDAQLELWHTSFAFIKSMALKSAVDLGIADAIHSHGGNATLPQIVSRAALHPSKIPC 1049
Q LLDAQLELWH SF ++KSMALKS +DLGIADAIH HGG ATL QI + A LHPSKI C
Sbjct: 54 QGLLDAQLELWHISFGYVKSMALKSCLDLGIADAIHHHGGAATLSQIGAVATLHPSKICC 233
Query: 1048 LRRLMRVLTAAGIFSAAHRSPDD 980
LRRLMRVLT +G+FS SP D
Sbjct: 234 LRRLMRVLTVSGVFSVQQPSPRD 302
Score = 116 bits (249), Expect(2) = 3e-037
Identities = 50/73 (68%), Positives = 55/73 (75%)
Frame = +3 / -3
Query: 1005 LKMPAAVSTRMRRRRQGILDGWSAALETIWGRVALPPWLWMASAIPRSTADLRAMDLMKA 1184
LK P VSTR+RRRRQ ILDGWS A IW RVA PPW WMASA+PRS D A+DL
Sbjct: 277 LKTPETVSTRIRRRRQQILDGWSVATAPIWERVAAPPWWWMASAMPRSKQDFSAIDLT*P 98
Query: 1185 KDVCQSSS*ASSK 1223
K++CQSSS*ASSK
Sbjct: 97 KEMCQSSS*ASSK 59
Score = 106 bits (227), Expect(3) = 6e-061
Identities = 42/96 (43%), Positives = 58/96 (60%)
Frame = -1 / +3
Query: 937 LLVGGSSSLAPFMSLVLHQVYVSPFLGLGTWLQHERSDPTLFEMTHGLTAWDLNDHKPAF 758
L+ S ++ P ++L L VS F LG W QH+ +P LF++ HG T W++ H AF
Sbjct: 351 LVSSASVNIVPVINLQLQPNIVSSFSELGAWFQHKLPEPDLFKLKHGKTFWEIAHHNAAF 530
Query: 757 GELFNQGMVCDSSFVMDIVVKECGDVFRGLSSLVDV 650
+ N M DS F+MDI ++ECG VF G+ SLVDV
Sbjct: 531 NTIVNDAMASDSRFLMDIAIRECGSVFXGIGSLVDV 638
Score = 59.3 bits (123), Expect(2) = 3e-037
Identities = 33/84 (39%), Positives = 37/84 (44%)
Frame = +3 / -3
Query: 672 PRKTSPHSLTTMSMTKLLSQTIPWLKSSPKAGLWSFRSQAVSPCVISNRVGSERSCCNHV 851
P KT PHSL MSM LS+ + L A LW SQ V PC R GS C N
Sbjct: 616 PXKTLPHSLMAMSMRNRLSEAMASLTMVLNAALWWAISQKVLPCFNLKRSGSGSLCWNQA 437
Query: 852 PRPRKGDT*TWCNTRDMKGARLEE 923
P K +T + R M G E
Sbjct: 436 PSSEKEETMLGWSCRLMTGTMFTE 365
Score = 26.3 bits (51), Expect(3) = 6e-061
Identities = 13/23 (56%), Positives = 14/23 (60%)
Frame = -1 / +3
Query: 985 DDGGGELVYGLTPASQLLVGGSS 917
DD ELVY LT S LLV +S
Sbjct: 300 DDVQVELVYTLTAVSHLLVSSAS 368
>gb|BG344915.2|BG344915 HVSMEg0016N12f Hordeum vulgare pre-anthesis spike EST library
HVcDNA0008 (white to yellow anther) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEg0016N12f, mRNA sequence
Length = 635
Score = 140 bits (301), Expect(3) = 6e-058
Identities = 60/83 (72%), Positives = 66/83 (79%)
Frame = -1 / +3
Query: 1228 QALLDAQLELWHTSFAFIKSMALKSAVDLGIADAIHSHGGNATLPQIVSRAALHPSKIPC 1049
Q LLDAQLELWH SF ++KSMALKS +DLGIADAIH HGG ATL QI + A LHPSKI C
Sbjct: 60 QGLLDAQLELWHISFGYVKSMALKSCLDLGIADAIHHHGGAATLSQIGAVATLHPSKICC 239
Query: 1048 LRRLMRVLTAAGIFSAAHRSPDD 980
LRRLMRVLT +G+FS SP D
Sbjct: 240 LRRLMRVLTVSGVFSVQQPSPRD 308
Score = 116 bits (249), Expect(2) = 3e-036
Identities = 50/73 (68%), Positives = 55/73 (75%)
Frame = +3 / -2
Query: 1005 LKMPAAVSTRMRRRRQGILDGWSAALETIWGRVALPPWLWMASAIPRSTADLRAMDLMKA 1184
LK P VSTR+RRRRQ ILDGWS A IW RVA PPW WMASA+PRS D A+DL
Sbjct: 283 LKTPETVSTRIRRRRQQILDGWSVATAPIWERVAAPPWWWMASAMPRSKQDFSAIDLT*P 104
Query: 1185 KDVCQSSS*ASSK 1223
K++CQSSS*ASSK
Sbjct: 103 KEMCQSSS*ASSK 65
Score = 96.8 bits (205), Expect(3) = 6e-058
Identities = 38/92 (41%), Positives = 53/92 (57%)
Frame = -1 / +3
Query: 937 LLVGGSSSLAPFMSLVLHQVYVSPFLGLGTWLQHERSDPTLFEMTHGLTAWDLNDHKPAF 758
L+ S ++ P ++L L VS F LG W QH+ +P LF++ HG T W++ H AF
Sbjct: 357 LVSSASVNIVPVINLQLQPNIVSSFSELGAWFQHKLPEPDLFKLKHGKTFWEIAHHNAAF 536
Query: 757 GELFNQGMVCDSSFVMDIVVKECGDVFRGLSS 662
+ N M DS F+MDI + ECG VF G+ S
Sbjct: 537 NTIVNDAMAXDSRFLMDIXIXECGSVFEGIGS 632
Score = 55.6 bits (115), Expect(2) = 3e-036
Identities = 32/84 (38%), Positives = 35/84 (41%)
Frame = +3 / -2
Query: 672 PRKTSPHSLTTMSMTKLLSQTIPWLKSSPKAGLWSFRSQAVSPCVISNRVGSERSCCNHV 851
P KT PHS MSM LS + L A LW SQ V PC R GS C N
Sbjct: 622 PSKTLPHSXMXMSMRNRLSXAMASLTMVLNAALWWAISQKVLPCFNLKRSGSGSLCWNQA 443
Query: 852 PRPRKGDT*TWCNTRDMKGARLEE 923
P K +T + R M G E
Sbjct: 442 PSSEKEETMLGWSCRLMTGTMFTE 371
Score = 26.3 bits (51), Expect(3) = 6e-058
Identities = 13/23 (56%), Positives = 14/23 (60%)
Frame = -1 / +3
Query: 985 DDGGGELVYGLTPASQLLVGGSS 917
DD ELVY LT S LLV +S
Sbjct: 306 DDVQVELVYTLTAVSHLLVSSAS 374
>gb|BI958645.1|BI958645 HVSMEn0016A21f Hordeum vulgare rachis EST library HVcDNA0015 (normal)
Hordeum vulgare subsp. vulgare cDNA clone HVSMEn0016A21f,
mRNA sequence
Length = 624
Score = 140 bits (301), Expect(3) = 9e-058
Identities = 60/83 (72%), Positives = 66/83 (79%)
Frame = -1 / +1
Query: 1228 QALLDAQLELWHTSFAFIKSMALKSAVDLGIADAIHSHGGNATLPQIVSRAALHPSKIPC 1049
Q LLDAQLELWH SF ++KSMALKS +DLGIADAIH HGG ATL QI + A LHPSKI C
Sbjct: 61 QGLLDAQLELWHISFGYVKSMALKSCLDLGIADAIHHHGGAATLSQIGAVATLHPSKICC 240
Query: 1048 LRRLMRVLTAAGIFSAAHRSPDD 980
LRRLMRVLT +G+FS SP D
Sbjct: 241 LRRLMRVLTVSGVFSVQQPSPRD 309
Score = 116 bits (249), Expect(2) = 3e-037
Identities = 50/73 (68%), Positives = 55/73 (75%)
Frame = +3 / -2
Query: 1005 LKMPAAVSTRMRRRRQGILDGWSAALETIWGRVALPPWLWMASAIPRSTADLRAMDLMKA 1184
LK P VSTR+RRRRQ ILDGWS A IW RVA PPW WMASA+PRS D A+DL
Sbjct: 284 LKTPETVSTRIRRRRQQILDGWSVATAPIWERVAAPPWWWMASAMPRSKQDFSAIDLT*P 105
Query: 1185 KDVCQSSS*ASSK 1223
K++CQSSS*ASSK
Sbjct: 104 KEMCQSSS*ASSK 66
Score = 96.4 bits (204), Expect(3) = 9e-058
Identities = 37/89 (41%), Positives = 52/89 (58%)
Frame = -1 / +1
Query: 937 LLVGGSSSLAPFMSLVLHQVYVSPFLGLGTWLQHERSDPTLFEMTHGLTAWDLNDHKPAF 758
L+ S ++ P ++L L VS F LG W QH+ +P LF++ HG T W++ H AF
Sbjct: 358 LVSSASVNIVPVINLQLQPNIVSSFSELGAWFQHKLPEPDLFKLKHGKTFWEIAHHNAAF 537
Query: 757 GELFNQGMVCDSSFVMDIVVKECGDVFRG 671
+ N M DS F+MDI ++ECG VF G
Sbjct: 538 NTIVNDAMASDSRFLMDIAIRECGSVFEG 624
Score = 59.3 bits (123), Expect(2) = 3e-037
Identities = 33/84 (39%), Positives = 37/84 (44%)
Frame = +3 / -2
Query: 672 PRKTSPHSLTTMSMTKLLSQTIPWLKSSPKAGLWSFRSQAVSPCVISNRVGSERSCCNHV 851
P KT PHSL MSM LS+ + L A LW SQ V PC R GS C N
Sbjct: 623 PSKTLPHSLMAMSMRNRLSEAMASLTMVLNAALWWAISQKVLPCFNLKRSGSGSLCWNQA 444
Query: 852 PRPRKGDT*TWCNTRDMKGARLEE 923
P K +T + R M G E
Sbjct: 443 PSSEKEETMLGWSCRLMTGTMFTE 372
Score = 26.3 bits (51), Expect(3) = 9e-058
Identities = 13/23 (56%), Positives = 14/23 (60%)
Frame = -1 / +1
Query: 985 DDGGGELVYGLTPASQLLVGGSS 917
DD ELVY LT S LLV +S
Sbjct: 307 DDVQVELVYTLTAVSHLLVSSAS 375
>gb|BJ462654.1|BJ462654 BJ462654 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags29l10 5', mRNA sequence
Length = 720
Score = 221 bits (478), Expect = 5e-057
Identities = 85/190 (44%), Positives = 125/190 (65%)
Frame = -1 / +2
Query: 745 NQGMVCDSSFVMDIVVKECGDVFRGLSSLVDVXXXXXXXXXAISTAFPHVQCSVLDLPHV 566
NQG+ + + +++ECGD+F+GL SL D A+ A+PH++C+VLDLP V
Sbjct: 134 NQGLAAHDNLGIATILRECGDIFKGLDSLTDCCGGDGTTARALVKAYPHIKCTVLDLPKV 313
Query: 565 AANAPANTSVKYIAGDMFESIPPADAVFLKWVLHDWGDADCIKILKNCKKAIPSRDAGGK 386
APA+ + Y+AGD+F ++PP+ V LK VLH W D DC+KIL C+KAIP R+ GGK
Sbjct: 314 VEKAPADGVINYVAGDLFHTVPPSQVVMLKLVLHFWSDEDCVKILAQCRKAIPPREEGGK 493
Query: 385 VIIVDMVVGGQSSNIKHKETQVLFDLFIMTINGAERDEHEWKKIISEAGFSDYKIIPVLG 206
VII+++VVG + + ++ L ++ G +RDE+ W ++ +AGF+DYKI+ LG
Sbjct: 494 VIIIEIVVGPSLGPVMFEAQLLMDMLMMVNTRGGQRDENHWCELFKKAGFTDYKIVKKLG 673
Query: 205 VRSIIEVYP* 176
RS+IEVYP*
Sbjct: 674 ARSVIEVYP* 703
>gb|BU974771.1|BU974771 HB29A24r BC Hordeum vulgare subsp. vulgare cDNA clone HB29A24
5-PRIME, mRNA sequence
Length = 667
Score = 159 bits (342), Expect(3) = 3e-056
Identities = 63/102 (61%), Positives = 79/102 (77%)
Frame = -1 / +3
Query: 541 SVKYIAGDMFESIPPADAVFLKWVLHDWGDADCIKILKNCKKAIPSRDAGGKVIIVDMVV 362
+++++AGDMFESIPPADAV LK VLHDWG DC+KIL+ CK+AIP+R AGGKVII+DMV
Sbjct: 213 NLRFVAGDMFESIPPADAVLLKNVLHDWGHDDCVKILQRCKEAIPARSAGGKVIIIDMVR 392
Query: 361 GGQSSNIKHKETQVLFDLFIMTINGAERDEHEWKKIISEAGF 236
G + K E + + D+F M NG ERDE EWK+I S+AGF
Sbjct: 393 GSLLGDKKIAEMEAMQDMFAMCTNGVERDESEWKRIFSDAGF 518
Score = 70.7 bits (148), Expect(4) = 2e-025
Identities = 30/62 (48%), Positives = 38/62 (61%)
Frame = +2 / -3
Query: 368 HINDYHLSSCIPGRYSFLTVLEYLDTISIAPVMQNPLKEDGVCRWNALKHVASNILDTGV 547
HI DYHL S P R FL L+YLD + +APVMQN L++D + R N KHV + V
Sbjct: 386 HIYDYHLPSGAPRRDGFLATLKYLDAVVVAPVMQNILEQDSIRRRNGFKHVTGHETQVVV 207
Query: 548 SG 553
+G
Sbjct: 206 AG 201
Score = 60.6 bits (126), Expect(3) = 3e-056
Identities = 22/63 (34%), Positives = 37/63 (58%)
Frame = -1 / +3
Query: 742 QGMVCDSSFVMDIVVKECGDVFRGLSSLVDVXXXXXXXXXAISTAFPHVQCSVLDLPHVA 563
+GM DS +++++ + G +FRG++SLVDV ++ AFP ++C+VLD P
Sbjct: 6 RGMTADSELFLEVIIVDKGRIFRGVTSLVDVGAGNGAGTRVVAKAFPRIKCTVLDRPQSL 185
Query: 562 ANA 554
A
Sbjct: 186 GQA 194
Score = 38.2 bits (77), Expect(3) = 3e-056
Identities = 15/22 (68%), Positives = 18/22 (81%)
Frame = -1 / +3
Query: 232 DYKIIPVLGVRSIIEVYP*LFG 167
DYKI+PVLG S+IE+YP* G
Sbjct: 525 DYKIMPVLGPLSVIEIYP*TAG 590
Score = 37.3 bits (75), Expect(4) = 2e-025
Identities = 15/20 (75%), Positives = 16/20 (80%)
Frame = +3 / -1
Query: 237 NPASEIIFFHSCSSRSAPLI 296
NPASE I FHS SSRS PL+
Sbjct: 517 NPASEKILFHSLSSRSTPLV 458
Score = 32.2 bits (64), Expect(4) = 2e-025
Identities = 18/56 (32%), Positives = 22/56 (39%)
Frame = +3 / -1
Query: 573 GRSRTLHWTCGNAVEIXXXXXXXXXXXXXXELRPRKTSPHSLTTMSMTKLLSQTIP 740
GRS T+H GNA+ E+ PRK P S S LS +P
Sbjct: 175 GRSSTVHLMRGNALATTRVPAPLPAPTSTREVTPRKMRPLSTIMTSRKSSLSAVMP 8
Score = 31.3 bits (62), Expect(4) = 2e-025
Identities = 14/22 (63%), Positives = 16/22 (72%)
Frame = +3 / -1
Query: 168 PNNHG*TSMMDRTPRTGMIL*S 233
P HG* S+ D+ P TGMIL*S
Sbjct: 589 PAVHG*ISITDKGPNTGMIL*S 524
>gb|BI959987.1|BI959987 HVSMEn0022M02f Hordeum vulgare rachis EST library HVcDNA0015 (normal)
Hordeum vulgare subsp. vulgare cDNA clone HVSMEn0022M02f,
mRNA sequence
Length = 629
Score = 130 bits (278), Expect(3) = 9e-056
Identities = 55/77 (71%), Positives = 61/77 (79%)
Frame = -1 / +3
Query: 1210 QLELWHTSFAFIKSMALKSAVDLGIADAIHSHGGNATLPQIVSRAALHPSKIPCLRRLMR 1031
QLELWH SF ++KSMALKS +DLGIADAIH HGG ATL QI + A LHPSKI CLRRLMR
Sbjct: 72 QLELWHISFGYVKSMALKSCLDLGIADAIHHHGGAATLSQIGAVATLHPSKICCLRRLMR 251
Query: 1030 VLTAAGIFSAAHRSPDD 980
VLT +G+FS SP D
Sbjct: 252 VLTVSGVFSVQQPSPRD 302
Score = 109 bits (232), Expect(2) = 6e-035
Identities = 46/69 (66%), Positives = 51/69 (73%)
Frame = +3 / -2
Query: 1005 LKMPAAVSTRMRRRRQGILDGWSAALETIWGRVALPPWLWMASAIPRSTADLRAMDLMKA 1184
LK P VSTR+RRRRQ ILDGWS A IW RVA PPW WMASA+PRS D A+DL
Sbjct: 277 LKTPETVSTRIRRRRQQILDGWSVATAPIWERVAAPPWWWMASAMPRSKQDFSAIDLT*P 98
Query: 1185 KDVCQSSS* 1211
K++CQSSS*
Sbjct: 97 KEMCQSSS* 71
Score = 100 bits (212), Expect(3) = 9e-056
Identities = 40/93 (43%), Positives = 56/93 (60%)
Frame = -1 / +3
Query: 937 LLVGGSSSLAPFMSLVLHQVYVSPFLGLGTWLQHERSDPTLFEMTHGLTAWDLNDHKPAF 758
L+ S ++ P ++L L VS F LG W QH+ +P LF++ HG T W++ H AF
Sbjct: 351 LVSSASVNIVPVINLQLQPNIVSSFSELGAWFQHKLPEPDLFKLKHGKTFWEIAHHNAAF 530
Query: 757 GELFNQGMVCDSSFVMDIVVKECGDVFRGLSSL 659
+ N M DS F+MDI + ECG+VF G+SSL
Sbjct: 531 NTIVNDPMASDSRFLMDIPITECGNVFEGISSL 629
Score = 59.3 bits (123), Expect(2) = 6e-035
Identities = 34/87 (39%), Positives = 39/87 (44%)
Frame = +3 / -2
Query: 663 ELRPRKTSPHSLTTMSMTKLLSQTIPWLKSSPKAGLWSFRSQAVSPCVISNRVGSERSCC 842
EL P KT PHS+ MSM LS+ + L A LW SQ V PC R GS C
Sbjct: 625 ELIPSKTLPHSVMGMSMRNRLSEAMGSLTMVLNAALWWAISQKVLPCFNLKRSGSGSLCW 446
Query: 843 NHVPRPRKGDT*TWCNTRDMKGARLEE 923
N P K +T + R M G E
Sbjct: 445 NQAPSSEKEETMLGWSCRLMTGTMFTE 365
Score = 26.3 bits (51), Expect(3) = 9e-056
Identities = 13/23 (56%), Positives = 14/23 (60%)
Frame = -1 / +3
Query: 985 DDGGGELVYGLTPASQLLVGGSS 917
DD ELVY LT S LLV +S
Sbjct: 300 DDVQVELVYTLTAVSHLLVSSAS 368
>gb|BJ467760.1|BJ467760 BJ467760 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags29l10 3', mRNA sequence
Length = 779
Score = 215 bits (464), Expect = 4e-055
Identities = 82/176 (46%), Positives = 119/176 (67%)
Frame = -1 / -2
Query: 703 VVKECGDVFRGLSSLVDVXXXXXXXXXAISTAFPHVQCSVLDLPHVAANAPANTSVKYIA 524
+++ECGD+F+GL SL D A+ A+PH++C+VLDLP V APA+ + Y+A
Sbjct: 733 ILRECGDIFKGLDSLTDCCGGDGTTARALVKAYPHIKCTVLDLPKVVEKAPADGVINYVA 554
Query: 523 GDMFESIPPADAVFLKWVLHDWGDADCIKILKNCKKAIPSRDAGGKVIIVDMVVGGQSSN 344
GD+F ++PP+ V LK VLH W D DC+KIL C+KAIP R+ GGKVII+++VVG
Sbjct: 553 GDLFHTVPPSQVVMLKLVLHFWSDEDCVKILAQCRKAIPPREEGGKVIIIEIVVGPSLGP 374
Query: 343 IKHKETQVLFDLFIMTINGAERDEHEWKKIISEAGFSDYKIIPVLGVRSIIEVYP* 176
+ + ++ L ++ G +RDE+ W ++ +AGF+DYKI+ LG RS+IEVYP*
Sbjct: 373 VMFEAQLLMDMLMMVNTRGGQRDENHWCELFKKAGFTDYKIVKKLGARSVIEVYP* 206
>gb|AV917258.1|AV917258 AV917258 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags18c14 5', mRNA sequence
Length = 582
Score = 206 bits (445), Expect = 2e-052
Identities = 82/171 (47%), Positives = 112/171 (65%)
Frame = -1 / +1
Query: 688 GDVFRGLSSLVDVXXXXXXXXXAISTAFPHVQCSVLDLPHVAANAPANTSVKYIAGDMFE 509
GD+F+GL SL D A+ A+PH++C+VLDLP V AP + V Y+AGD+F
Sbjct: 13 GDIFKGLESLTDCCGGDGTTARALVKAYPHIKCTVLDLPKVIDKAPKDGVVNYVAGDLFH 192
Query: 508 SIPPADAVFLKWVLHDWGDADCIKILKNCKKAIPSRDAGGKVIIVDMVVGGQSSNIKHKE 329
++P + AV LK VLH W D DC+KIL CKKAIP D GGK+II+D+V+G I +
Sbjct: 193 TVPSSQAVMLKLVLHFWSDEDCVKILTQCKKAIPPHDEGGKIIIIDIVIGPSLGPIMFEA 372
Query: 328 TQVLFDLFIMTINGAERDEHEWKKIISEAGFSDYKIIPVLGVRSIIEVYP* 176
++ L ++T G +R E++W+K+ EAGF DYKI+ LG R +IEVYP*
Sbjct: 373 QLLMDMLMMVTTRGVQRSENDWRKLFMEAGFKDYKIVRKLGARCVIEVYP* 525
>gb|AV922427.1|AV922427 AV922427 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags18c14 3', mRNA sequence
Length = 530
Score = 206 bits (445), Expect = 2e-052
Identities = 82/171 (47%), Positives = 112/171 (65%)
Frame = -1 / -2
Query: 688 GDVFRGLSSLVDVXXXXXXXXXAISTAFPHVQCSVLDLPHVAANAPANTSVKYIAGDMFE 509
GD+F+GL SL D A+ A+PH++C+VLDLP V AP + V Y+AGD+F
Sbjct: 529 GDIFKGLESLTDCCGGDGTTARALVKAYPHIKCTVLDLPKVIDKAPKDGVVNYVAGDLFH 350
Query: 508 SIPPADAVFLKWVLHDWGDADCIKILKNCKKAIPSRDAGGKVIIVDMVVGGQSSNIKHKE 329
++P + AV LK VLH W D DC+KIL CKKAIP D GGK+II+D+V+G I +
Sbjct: 349 TVPSSQAVMLKLVLHFWSDEDCVKILTQCKKAIPPHDEGGKIIIIDIVIGPSLGPIMFEA 170
Query: 328 TQVLFDLFIMTINGAERDEHEWKKIISEAGFSDYKIIPVLGVRSIIEVYP* 176
++ L ++T G +R E++W+K+ EAGF DYKI+ LG R +IEVYP*
Sbjct: 169 QLLMDMLMMVTTRGVQRSENDWRKLFMEAGFKDYKIVRKLGARCVIEVYP* 17
>gb|CB877071.1|CB877071 HP03H10T HP Hordeum vulgare subsp. vulgare cDNA clone HP03H10
5-PRIME, mRNA sequence
Length = 587
Score = 159 bits (342), Expect(3) = 2e-051
Identities = 63/102 (61%), Positives = 79/102 (77%)
Frame = -1 / +2
Query: 541 SVKYIAGDMFESIPPADAVFLKWVLHDWGDADCIKILKNCKKAIPSRDAGGKVIIVDMVV 362
+++++AGDMFESIPPADAV LK VLHDWG DC+KIL+ CK+AIP+R AGGKVII+DMV
Sbjct: 158 NLRFVAGDMFESIPPADAVLLKNVLHDWGHDDCVKILQRCKEAIPARSAGGKVIIIDMVR 337
Query: 361 GGQSSNIKHKETQVLFDLFIMTINGAERDEHEWKKIISEAGF 236
G + K E + + D+F M NG ERDE EWK+I S+AGF
Sbjct: 338 GSLLGDKKIAEMEAMQDMFAMCTNGVERDESEWKRIFSDAGF 463
Score = 70.7 bits (148), Expect(4) = 5e-025
Identities = 30/62 (48%), Positives = 38/62 (61%)
Frame = +2 / -2
Query: 368 HINDYHLSSCIPGRYSFLTVLEYLDTISIAPVMQNPLKEDGVCRWNALKHVASNILDTGV 547
HI DYHL S P R FL L+YLD + +APVMQN L++D + R N KHV + V
Sbjct: 331 HIYDYHLPSGAPRRDGFLATLKYLDAVVVAPVMQNILEQDSIRRRNGFKHVTGHETQVVV 152
Query: 548 SG 553
+G
Sbjct: 151 AG 146
Score = 44.6 bits (91), Expect(3) = 2e-051
Identities = 17/43 (39%), Positives = 25/43 (58%)
Frame = -1 / +2
Query: 682 VFRGLSSLVDVXXXXXXXXXAISTAFPHVQCSVLDLPHVAANA 554
+FRG++SLVDV ++ AFP ++C+VLD P A
Sbjct: 11 IFRGVTSLVDVGAGNGAGTRVVAKAFPRIKCTVLDRPQSLGQA 139
Score = 38.2 bits (77), Expect(3) = 2e-051
Identities = 15/22 (68%), Positives = 18/22 (81%)
Frame = -1 / +2
Query: 232 DYKIIPVLGVRSIIEVYP*LFG 167
DYKI+PVLG S+IE+YP* G
Sbjct: 470 DYKIMPVLGPLSVIEIYP*TAG 535
Score = 37.3 bits (75), Expect(4) = 5e-025
Identities = 15/20 (75%), Positives = 16/20 (80%)
Frame = +3 / -3
Query: 237 NPASEIIFFHSCSSRSAPLI 296
NPASE I FHS SSRS PL+
Sbjct: 462 NPASEKILFHSLSSRSTPLV 403
Score = 31.3 bits (62), Expect(4) = 5e-025
Identities = 14/22 (63%), Positives = 16/22 (72%)
Frame = +3 / -3
Query: 168 PNNHG*TSMMDRTPRTGMIL*S 233
P HG* S+ D+ P TGMIL*S
Sbjct: 534 PAVHG*ISITDKGPNTGMIL*S 469
Score = 30.4 bits (60), Expect(4) = 5e-025
Identities = 15/38 (39%), Positives = 19/38 (50%)
Frame = +2 / -2
Query: 551 GSIGGDMREIQDTALDMRERGRDSQGRRAKPSGDVDKG 664
G + +R +Q ALD RER D A DVD+G
Sbjct: 142 GRLAEGLRTVQHGALDARERLGDHPRAGAVAGADVDEG 29
>gb|CB879734.1|CB879734 HP03H10w HP Hordeum vulgare subsp. vulgare cDNA clone HP03H10
3-PRIME, mRNA sequence
Length = 628
Score = 159 bits (342), Expect(3) = 2e-051
Identities = 63/102 (61%), Positives = 79/102 (77%)
Frame = -1 / -1
Query: 541 SVKYIAGDMFESIPPADAVFLKWVLHDWGDADCIKILKNCKKAIPSRDAGGKVIIVDMVV 362
+++++AGDMFESIPPADAV LK VLHDWG DC+KIL+ CK+AIP+R AGGKVII+DMV
Sbjct: 478 NLRFVAGDMFESIPPADAVLLKNVLHDWGHDDCVKILQRCKEAIPARSAGGKVIIIDMVR 299
Query: 361 GGQSSNIKHKETQVLFDLFIMTINGAERDEHEWKKIISEAGF 236
G + K E + + D+F M NG ERDE EWK+I S+AGF
Sbjct: 298 GSLLGDKKIAEMEAMQDMFAMCTNGVERDESEWKRIFSDAGF 173
Score = 70.7 bits (148), Expect(4) = 1e-024
Identities = 30/62 (48%), Positives = 38/62 (61%)
Frame = +2 / +2
Query: 368 HINDYHLSSCIPGRYSFLTVLEYLDTISIAPVMQNPLKEDGVCRWNALKHVASNILDTGV 547
HI DYHL S P R FL L+YLD + +APVMQN L++D + R N KHV + V
Sbjct: 305 HIYDYHLPSGAPRRDGFLATLKYLDAVVVAPVMQNILEQDSIRRRNGFKHVTGHETQVVV 484
Query: 548 SG 553
+G
Sbjct: 485 AG 490
Score = 44.1 bits (90), Expect(3) = 2e-051
Identities = 17/44 (38%), Positives = 25/44 (56%)
Frame = -1 / -1
Query: 685 DVFRGLSSLVDVXXXXXXXXXAISTAFPHVQCSVLDLPHVAANA 554
++FRG++SLVDV + AFP ++C+VLD P A
Sbjct: 628 EIFRGVTSLVDVGAGNGAGTRVFAKAFPRIKCTVLDRPQSLGQA 497
Score = 38.2 bits (77), Expect(3) = 2e-051
Identities = 15/22 (68%), Positives = 18/22 (81%)
Frame = -1 / -1
Query: 232 DYKIIPVLGVRSIIEVYP*LFG 167
DYKI+PVLG S+IE+YP* G
Sbjct: 166 DYKIMPVLGPLSVIEIYP*TAG 101
Score = 37.3 bits (75), Expect(4) = 1e-024
Identities = 15/20 (75%), Positives = 16/20 (80%)
Frame = +3 / +3
Query: 237 NPASEIIFFHSCSSRSAPLI 296
NPASE I FHS SSRS PL+
Sbjct: 174 NPASEKILFHSLSSRSTPLV 233
Score = 31.3 bits (62), Expect(4) = 1e-024
Identities = 14/22 (63%), Positives = 16/22 (72%)
Frame = +3 / +3
Query: 168 PNNHG*TSMMDRTPRTGMIL*S 233
P HG* S+ D+ P TGMIL*S
Sbjct: 102 PAVHG*ISITDKGPNTGMIL*S 167
Score = 29.5 bits (58), Expect(4) = 1e-024
Identities = 14/28 (50%), Positives = 16/28 (57%)
Frame = +1 / +1
Query: 580 PGHCTGHAGTRSR*PGPPRQALRRRRQG 663
P CT AGT R P R+ RRRR+G
Sbjct: 523 PARCT*CAGTPWRTPACRRRCRRRRRRG 606
>gb|BJ449787.1|BJ449787 BJ449787 K. Sato unpublished cDNA library, cv. Akashinriki
vegetative stage leaves Hordeum vulgare subsp. vulgare
cDNA clone baak26l07 5', mRNA sequence
Length = 609
Score = 155 bits (334), Expect(3) = 1e-050
Identities = 63/109 (57%), Positives = 83/109 (76%)
Frame = -1 / +1
Query: 556 APANTSVKYIAGDMFESIPPADAVFLKWVLHDWGDADCIKILKNCKKAIPSRDAGGKVII 377
A + + ++AGDMF+SIP ADAV LK +LHDWG DC+KILK CK+AIP+R+AGGKVII
Sbjct: 121 AAGDDILSFVAGDMFQSIPSADAVLLKNILHDWGHDDCVKILKCCKEAIPARNAGGKVII 300
Query: 376 VDMVVGGQSSNIKHKETQVLFDLFIMTINGAERDEHEWKKIISEAGFSD 230
+DMV G + + K E + + +LF+M I G ER+E EWK+I S+AGFSD
Sbjct: 301 IDMVRGSANGDRKINEMEAIQNLFMMYITGIERNEIEWKRIFSDAGFSD 447
Score = 43.2 bits (88), Expect(3) = 1e-050
Identities = 17/39 (43%), Positives = 23/39 (58%)
Frame = -1 / +1
Query: 664 SLVDVXXXXXXXXXAISTAFPHVQCSVLDLPHVAANAPA 548
SLVDV I+ AFP ++C+V+DLPHV + A
Sbjct: 4 SLVDVGGGNGAGTQVIAKAFPRIKCTVMDLPHVVVSGQA 120
Score = 40.0 bits (81), Expect(3) = 1e-050
Identities = 18/33 (54%), Positives = 23/33 (69%)
Frame = -1 / +1
Query: 232 DYKIIPVLGVRSIIEVYP*LFGEYVFRFFLNKL 134
DYKI+PVLG S+IE+YP* G+ + NKL
Sbjct: 448 DYKILPVLGPYSVIEIYP*KPGDLYHINWPNKL 546
>gb|AL503735.1|AL503735 AL503735 Hordeum vulgare Barke roots Hordeum vulgare subsp. vulgare
cDNA clone HW03D24T 5', mRNA sequence
Length = 700
Score = 200 bits (431), Expect = 1e-050
Identities = 79/174 (45%), Positives = 113/174 (64%)
Frame = -1 / +1
Query: 703 VVKECGDVFRGLSSLVDVXXXXXXXXXAISTAFPHVQCSVLDLPHVAANAPANTSVKYIA 524
+++EC D+F+GL SL D AI+ A PHV+C+VLDLP V P++ V Y+A
Sbjct: 28 IMRECHDLFKGLESLTDCCGGDGKTARAITKAHPHVKCTVLDLPKVIEKTPSDCVVNYVA 207
Query: 523 GDMFESIPPADAVFLKWVLHDWGDADCIKILKNCKKAIPSRDAGGKVIIVDMVVGGQSSN 344
GD+F ++P A AV LK VLH W D DC+KIL CK AIPSR+ GGKVI++D+VV
Sbjct: 208 GDLFHTVPKAQAVMLKLVLHHWSDDDCVKILTQCKNAIPSREEGGKVIVIDIVVEPSLGP 387
Query: 343 IKHKETQVLFDLFIMTINGAERDEHEWKKIISEAGFSDYKIIPVLGVRSIIEVY 182
+ + ++ L ++ G +R E++W+ + +AGF+DYKII +G R +IEVY
Sbjct: 388 VMFEAQTLMDMLMLVFTRGRQRSENDWRDLFMKAGFTDYKIIKKMGARGVIEVY 549
>gb|BI936373.1|BI936373 HVSMEa0019K09f Hordeum vulgare seedling shoot EST library HVcDNA0001
(Cold stress) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEa0019K09f, mRNA sequence
Length = 651
Score = 110 bits (234), Expect(2) = 3e-049
Identities = 52/99 (52%), Positives = 67/99 (67%)
Frame = -1 / +1
Query: 1225 ALLDAQLELWHTSFAFIKSMALKSAVDLGIADAIHSHGGNATLPQIVSRAALHPSKIPCL 1046
AL DA+LELW ++F++IKSMALKSA+DL +ADAI+ +GG TL IV+R +H S I L
Sbjct: 37 ALADAELELWTSTFSYIKSMALKSALDLRLADAINHNGGVVTLYDIVTRVTIHHS*IH*L 216
Query: 1045 RRLMRVLTAAGIFSAAHRSPDDGGGELVYGLTPASQLLV 929
R +MRV+T G+ S H E Y LTPA +LLV
Sbjct: 217 RCVMRVVTLTGVLSVQHDQVMSTDDETTYALTPAYRLLV 333
Score = 105 bits (225), Expect(2) = 3e-049
Identities = 42/103 (40%), Positives = 62/103 (60%)
Frame = -1 / +1
Query: 916 SLAPFMSLVLHQVYVSPFLGLGTWLQHERSDPTLFEMTHGLTAWDLNDHKPAFGELFNQG 737
+L M+++L+ + ++ LG+G W ++ +SDP++F+ THG W + L N G
Sbjct: 343 NLTSMMAMLLNPIMLTQCLGIGDWFKYWQSDPSIFDQTHGEGLWKMAHRDATLDALINDG 522
Query: 736 MVCDSSFVMDIVVKECGDVFRGLSSLVDVXXXXXXXXXAISTA 608
MVCD F+MDI VKECG+VF G++SLVDV AI A
Sbjct: 523 MVCDRRFIMDIDVKECGEVFHGITSLVDVGSGLGAESEAICNA 651
>gb|BF259348.2|BF259348 HVSMEf0019F16f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEf0019F16f, mRNA sequence
Length = 574
Score = 161 bits (346), Expect(2) = 6e-049
Identities = 69/153 (45%), Positives = 92/153 (60%)
Frame = -1 / +3
Query: 754 ELFNQGMVCDSSFVMDIVVKECGDVFRGLSSLVDVXXXXXXXXXAISTAFPHVQCSVLDL 575
+LF + + + V++EC +F GL SL D AI AFPH++C+VLDL
Sbjct: 3 KLFYEALAAHDHMGIGTVLRECRGLFDGLQSLTDCCGGDGTTARAIVKAFPHIKCNVLDL 182
Query: 574 PHVAANAPANTSVKYIAGDMFESIPPADAVFLKWVLHDWGDADCIKILKNCKKAIPSRDA 395
P V P++ V Y+AGD+ ++PPA AV LK VLH W D DCI IL CKKAIPSR+
Sbjct: 183 PKVIDKVPSDGVVNYVAGDLLHTVPPAQAVMLKLVLHFWSDEDCINILAQCKKAIPSREM 362
Query: 394 GGKVIIVDMVVGGQSSNIKHKETQVLFDLFIMT 296
GGKVII+D+V+G + I E + +FI T
Sbjct: 363 GGKVIIIDIVLGSSLATITETELLMDMLMFICT 461
Score = 53.8 bits (111), Expect(2) = 6e-049
Identities = 21/43 (48%), Positives = 28/43 (65%)
Frame = -1 / +3
Query: 310 LFIMTINGAERDEHEWKKIISEAGFSDYKIIPVLGVRSIIEVY 182
L + G +R+E EW + +AGFSDY+II LG R +IEVY
Sbjct: 444 LMFICTRGRQRNEKEWSMLFMKAGFSDYEIIKKLGHRGVIEVY 572
>gb|AV913364.1|AV913364 AV913364 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags21m21 5', mRNA sequence
Length = 665
Score = 192 bits (414), Expect = 3e-048
Identities = 76/144 (52%), Positives = 99/144 (68%)
Frame = -1 / +3
Query: 889 LHQVYVSPFLGLGTWLQHERSDPTLFEMTHGLTAWDLNDHKPAFGELFNQGMVCDSSFVM 710
L+ + ++PFLG+G W ++ + DP+LFE THG W + F L N GMV DS F+M
Sbjct: 15 LNPIMLTPFLGIGDWFKYGQPDPSLFEQTHGEGLWKMAHRDATFDALINDGMVSDSRFIM 194
Query: 709 DIVVKECGDVFRGLSSLVDVXXXXXXXXXAISTAFPHVQCSVLDLPHVAANAPANTSVKY 530
DI VKECG+VF+G++SLVDV AIS AFPH++C+V+DL HV ANAP T VK+
Sbjct: 195 DIAVKECGEVFQGITSLVDVGGGLGAASQAISKAFPHLECTVMDLGHVIANAPTGTDVKF 374
Query: 529 IAGDMFESIPPADAVFLKWVLHDW 458
+AGDMFES+P A+AVFLK W
Sbjct: 375 VAGDMFESVPAANAVFLKVRTSSW 446
>gb|AV918663.1|AV918663 AV918663 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags21m21 3', mRNA sequence
Length = 612
Score = 192 bits (414), Expect = 3e-048
Identities = 76/144 (52%), Positives = 99/144 (68%)
Frame = -1 / -3
Query: 889 LHQVYVSPFLGLGTWLQHERSDPTLFEMTHGLTAWDLNDHKPAFGELFNQGMVCDSSFVM 710
L+ + ++PFLG+G W ++ + DP+LFE THG W + F L N GMV DS F+M
Sbjct: 610 LNPIMLTPFLGIGDWFKYGQPDPSLFEQTHGEGLWKMAHRDATFDALINDGMVSDSRFIM 431
Query: 709 DIVVKECGDVFRGLSSLVDVXXXXXXXXXAISTAFPHVQCSVLDLPHVAANAPANTSVKY 530
DI VKECG+VF+G++SLVDV AIS AFPH++C+V+DL HV ANAP T VK+
Sbjct: 430 DIAVKECGEVFQGITSLVDVGGGLGAASQAISKAFPHLECTVMDLGHVIANAPTGTDVKF 251
Query: 529 IAGDMFESIPPADAVFLKWVLHDW 458
+AGDMFES+P A+AVFLK W
Sbjct: 250 VAGDMFESVPAANAVFLKVRTSSW 179
>gb|AL503330.1|AL503330 AL503330 Hordeum vulgare Barke roots Hordeum vulgare subsp. vulgare
cDNA clone HW01K22T 5', mRNA sequence
Length = 700
Score = 189 bits (407), Expect = 3e-047
Identities = 76/183 (41%), Positives = 111/183 (60%)
Frame = -1 / +1
Query: 766 PAFGELFNQGMVCDSSFVMDIVVKECGDVFRGLSSLVDVXXXXXXXXXAISTAFPHVQCS 587
P L G+ + + +++EC D+F+GL SL D AI+ A PHV+C+
Sbjct: 148 PELDALVTDGLEAHDNLGIGTIMRECHDLFKGLESLTDCCGGDGKTARAITKAHPHVKCT 327
Query: 586 VLDLPHVAANAPANTSVKYIAGDMFESIPPADAVFLKWVLHDWGDADCIKILKNCKKAIP 407
VLDLP V P++ V Y+AGD+F ++P A AV LK VLH W D DC+KIL CK AIP
Sbjct: 328 VLDLPKVIEKTPSDCVVNYVAGDLFHTVPKAQAVMLKLVLHHWSDDDCVKILTQCKNAIP 507
Query: 406 SRDAGGKVIIVDMVVGGQSSNIKHKETQVLFDLFIMTINGAERDEHEWKKIISEAGFSDY 227
SR+ GGKVI++D+VV + + ++ L ++ G +R E++W+ + +AGF+DY
Sbjct: 508 SREEGGKVIVIDIVVEPSLGPVMFEAQTLMDMLMLVFTRGRQRSENDWRDLFMKAGFTDY 687
Query: 226 KII 218
KII
Sbjct: 688 KII 696
>gb|BM817346.1|BM817346 HC111F01_T3.ab1 HC Hordeum vulgare subsp. vulgare cDNA clone
HC111F01_T3.ab1 similar to Hexaprenyldihydroxybenzoate
methyltransferase,Apigenin
4'-O-methyltransferase,[Myelin basic protein]-arginine
N-methyltransferase,Catechol
O-methyltransferase,Glycoprotein-fucosylgalactoside
alpha-galactosyltransferase,, mRNA sequence
Length = 905
Score = 189 bits (407), Expect = 3e-047
Identities = 77/185 (41%), Positives = 113/185 (61%)
Frame = -1 / +3
Query: 754 ELFNQGMVCDSSFVMDIVVKECGDVFRGLSSLVDVXXXXXXXXXAISTAFPHVQCSVLDL 575
EL +G+ + + +++EC D+F+GL SL D AI+ A PHV+C+VLDL
Sbjct: 183 ELVTEGLAAHDNLGIGTIMRECHDLFKGLESLTDCCGGDGTTARAITKAHPHVKCTVLDL 362
Query: 574 PHVAANAPANTSVKYIAGDMFESIPPADAVFLKWVLHDWGDADCIKILKNCKKAIPSRDA 395
P V AP++ V +AGD+F S+P + AV LK VLH W D DC+KIL C+ AIPS +
Sbjct: 363 PKVIDKAPSDGIVNCVAGDLFHSVPKSQAVMLKLVLHHWSDEDCVKILSQCRDAIPSHEE 542
Query: 394 GGKVIIVDMVVGGQSSNIKHKETQVLFDLFIMTINGAERDEHEWKKIISEAGFSDYKIIP 215
GGKVII+D+VVG + + ++ L ++ +R E++W ++ +AGFSDYKI+
Sbjct: 543 GGKVIIIDIVVGPSLXPVMFEAQLLMDMLMLVNTKSRQRTENDWHELFMKAGFSDYKIVK 722
Query: 214 VLGVR 200
L R
Sbjct: 723 KLRAR 737
>gb|AV921748.1|AV921748 AV921748 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags12j23 3', mRNA sequence
Length = 659
Score = 187 bits (402), Expect = 1e-046
Identities = 70/144 (48%), Positives = 101/144 (70%)
Frame = -1 / -1
Query: 607 FPHVQCSVLDLPHVAANAPANTSVKYIAGDMFESIPPADAVFLKWVLHDWGDADCIKILK 428
+PH++C+VLDLP V APA+ + Y+AGD+F ++PP+ V LK VLH W D DC+KIL
Sbjct: 659 YPHIKCTVLDLPKVVEKAPADGVINYVAGDLFHTVPPSQVVMLKLVLHFWSDEDCVKILA 480
Query: 427 NCKKAIPSRDAGGKVIIVDMVVGGQSSNIKHKETQVLFDLFIMTINGAERDEHEWKKIIS 248
C+KAIP R+ GGKVII+++VVG + + ++ L ++ G +RDE+ W ++
Sbjct: 479 QCRKAIPPREEGGKVIIIEIVVGPSLGPVMFEAQLLMDMLMMVNTRGGQRDENHWCELFK 300
Query: 247 EAGFSDYKIIPVLGVRSIIEVYP* 176
+AGF+DYKI+ LG RS+IEVYP*
Sbjct: 299 KAGFTDYKIVKKLGARSVIEVYP* 228
>gb|BJ468231.1|BJ468231 BJ468231 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags37m03 3', mRNA sequence
Length = 626
Score = 187 bits (402), Expect = 1e-046
Identities = 70/144 (48%), Positives = 101/144 (70%)
Frame = -1 / -3
Query: 607 FPHVQCSVLDLPHVAANAPANTSVKYIAGDMFESIPPADAVFLKWVLHDWGDADCIKILK 428
+PH++C+VLDLP V APA+ + Y+AGD+F ++PP+ V LK VLH W D DC+KIL
Sbjct: 624 YPHIKCTVLDLPKVVEKAPADGVINYVAGDLFHTVPPSQVVMLKLVLHFWSDEDCVKILA 445
Query: 427 NCKKAIPSRDAGGKVIIVDMVVGGQSSNIKHKETQVLFDLFIMTINGAERDEHEWKKIIS 248
C+KAIP R+ GGKVII+++VVG + + ++ L ++ G +RDE+ W ++
Sbjct: 444 QCRKAIPPREEGGKVIIIEIVVGPSLGPVMFEAQLLMDMLMMVNTRGGQRDENHWCELFK 265
Query: 247 EAGFSDYKIIPVLGVRSIIEVYP* 176
+AGF+DYKI+ LG RS+IEVYP*
Sbjct: 264 KAGFTDYKIVKKLGARSVIEVYP* 193
>gb|BJ457207.1|BJ457207 BJ457207 K. Sato unpublished cDNA library, cv. Akashinriki
vegetative stage leaves Hordeum vulgare subsp. vulgare
cDNA clone baak26l07 3', mRNA sequence
Length = 565
Score = 154 bits (331), Expect(3) = 2e-046
Identities = 63/109 (57%), Positives = 82/109 (75%)
Frame = -1 / -3
Query: 556 APANTSVKYIAGDMFESIPPADAVFLKWVLHDWGDADCIKILKNCKKAIPSRDAGGKVII 377
A + + ++AGDMF+SIP ADAV LK +LHDWG DC+KILK CK+AIP+R+AGGKVII
Sbjct: 467 AAGDDILSFVAGDMFQSIPSADAVLLKNILHDWGHDDCVKILKCCKEAIPARNAGGKVII 288
Query: 376 VDMVVGGQSSNIKHKETQVLFDLFIMTINGAERDEHEWKKIISEAGFSD 230
+DMV G + + K E + + +LF+M I G ER+E EWK I S+AGFSD
Sbjct: 287 IDMVRGSANGDRKINEMEAIQNLFMMYITGIERNEIEWKXIFSDAGFSD 141
Score = 36.8 bits (74), Expect(3) = 2e-046
Identities = 12/24 (50%), Positives = 18/24 (75%)
Frame = -1 / -3
Query: 619 ISTAFPHVQCSVLDLPHVAANAPA 548
I+ AFP ++C+V+DLPHV + A
Sbjct: 539 IAKAFPRIKCTVMDLPHVVVSGQA 468
Score = 34.1 bits (68), Expect(3) = 2e-046
Identities = 14/23 (60%), Positives = 17/23 (73%)
Frame = -1 / -3
Query: 232 DYKIIPVLGVRSIIEVYP*LFGE 164
DY I PVLG S+IE+YP* G+
Sbjct: 140 DYXIXPVLGPYSVIEIYP*KPGD 72
>gb|AV918157.1|AV918157 AV918157 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags20b03 3', mRNA sequence
Length = 676
Score = 166 bits (357), Expect(2) = 2e-045
Identities = 64/138 (46%), Positives = 92/138 (66%)
Frame = -1 / -1
Query: 595 QCSVLDLPHVAANAPANTSVKYIAGDMFESIPPADAVFLKWVLHDWGDADCIKILKNCKK 416
+C+VLDLP V P++ V Y+AGD+F ++P A AV LK VLH W D DC+KIL CK
Sbjct: 559 KCTVLDLPKVIEKTPSDCVVNYVAGDLFHTVPKAQAVMLKLVLHHWSDDDCVKILTQCKN 380
Query: 415 AIPSRDAGGKVIIVDMVVGGQSSNIKHKETQVLFDLFIMTINGAERDEHEWKKIISEAGF 236
AIPSR+ GGKVI++D+VV + + ++ L ++ G +R E++W+ + +AGF
Sbjct: 379 AIPSREEGGKVIVIDIVVEPSLGPVMFEAQTLMDMLMLVFTRGRQRSENDWRDLFMKAGF 200
Query: 235 SDYKIIPVLGVRSIIEVY 182
+DYKII +G R +IEVY
Sbjct: 199 TDYKIIKKMGARGVIEVY 146
Score = 37.3 bits (75), Expect(2) = 2e-045
Identities = 15/37 (40%), Positives = 22/37 (59%)
Frame = -1 / -3
Query: 703 VVKECGDVFRGLSSLVDVXXXXXXXXXAISTAFPHVQ 593
+++EC D+F+GL SL D AI+ A PHV+
Sbjct: 668 IMRECHDLFKGLESLTDCCGGDGKTARAITKAHPHVK 558
>gb|BQ662115.1|BQ662115 HR01K01u HR Hordeum vulgare subsp. vulgare cDNA clone HR01K01
3-PRIME, mRNA sequence
Length = 528
Score = 143 bits (306), Expect(2) = 4e-045
Identities = 58/108 (53%), Positives = 74/108 (68%)
Frame = -1 / -2
Query: 619 ISTAFPHVQCSVLDLPHVAANAPANTSVKYIAGDMFESIPPADAVFLKWVLHDWGDADCI 440
I AFPH++C+VLDLP V P++ V Y+AGD+F ++PPA AV LK VLH W D DCI
Sbjct: 521 IVKAFPHIKCNVLDLPKVIDKVPSDGVVNYVAGDLFHTVPPAQAVMLKLVLHFWSDEDCI 342
Query: 439 KILKNCKKAIPSRDAGGKVIIVDMVVGGQSSNIKHKETQVLFDLFIMT 296
IL CKKAIPSR+ GGKVII+D+V+G + I E + +FI T
Sbjct: 341 NILAQCKKAIPSREMGGKVIIIDIVLGSSLATITETELLMDMLMFICT 198
Score = 59.3 bits (123), Expect(2) = 4e-045
Identities = 24/45 (53%), Positives = 30/45 (66%)
Frame = -1 / -2
Query: 310 LFIMTINGAERDEHEWKKIISEAGFSDYKIIPVLGVRSIIEVYP* 176
L + G +R+E EW + +AGFSDYKII LG R +IEVYP*
Sbjct: 215 LMFICTRGRQRNEKEWSMLFMKAGFSDYKIIKKLGHRGVIEVYP* 81
>gb|AV929439.1|AV929439 AV929439 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp.
vulgare cDNA clone basd14d20 3', mRNA sequence
Length = 670
Score = 142 bits (305), Expect(2) = 6e-045
Identities = 57/105 (54%), Positives = 73/105 (69%)
Frame = -1 / -3
Query: 610 AFPHVQCSVLDLPHVAANAPANTSVKYIAGDMFESIPPADAVFLKWVLHDWGDADCIKIL 431
AFPH++C+VLDLP V P++ V Y+AGD+F ++PPA AV LK VLH W D DCI IL
Sbjct: 665 AFPHIKCNVLDLPKVIDKVPSDGVVNYVAGDLFHTVPPAQAVMLKLVLHFWSDEDCINIL 486
Query: 430 KNCKKAIPSRDAGGKVIIVDMVVGGQSSNIKHKETQVLFDLFIMT 296
CKKAIPSR+ GGKVII+D+V+G + I E + +FI T
Sbjct: 485 AQCKKAIPSREMGGKVIIIDIVLGSSLATITETELLMDMLMFICT 351
Score = 59.3 bits (123), Expect(2) = 6e-045
Identities = 24/45 (53%), Positives = 30/45 (66%)
Frame = -1 / -3
Query: 310 LFIMTINGAERDEHEWKKIISEAGFSDYKIIPVLGVRSIIEVYP* 176
L + G +R+E EW + +AGFSDYKII LG R +IEVYP*
Sbjct: 368 LMFICTRGRQRNEKEWSMLFMKAGFSDYKIIKKLGHRGVIEVYP* 234
>gb|AV916317.1|AV916317 AV916317 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags12j23 5', mRNA sequence
Length = 585
Score = 180 bits (388), Expect = 1e-044
Identities = 68/161 (42%), Positives = 102/161 (63%)
Frame = -1 / +2
Query: 745 NQGMVCDSSFVMDIVVKECGDVFRGLSSLVDVXXXXXXXXXAISTAFPHVQCSVLDLPHV 566
NQG+ + + +++ECGD+F+GL SL D A+ A+PH++C+VLDLP V
Sbjct: 89 NQGLAAHDNLGIATILRECGDIFKGLDSLTDCCGGDGTTARALVKAYPHIKCTVLDLPKV 268
Query: 565 AANAPANTSVKYIAGDMFESIPPADAVFLKWVLHDWGDADCIKILKNCKKAIPSRDAGGK 386
APA+ + Y+AGD+F ++PP+ V LK VLH W D DC+KIL C+KAIP R+ GGK
Sbjct: 269 VEKAPADGVINYVAGDLFHTVPPSQVVMLKLVLHFWSDEDCVKILAQCRKAIPPREEGGK 448
Query: 385 VIIVDMVVGGQSSNIKHKETQVLFDLFIMTINGAERDEHEW 263
VII+++VVG + + ++ L ++ G +RDE+ W
Sbjct: 449 VIIIEIVVGPSLGPVMFEAQLLMDMLMMVNTRGGQRDENHW 571
>gb|BI778623.2|BI778623 EBro07_SQ003_N10_R root, 3 week, reduced light, cv Optic, EBro07
Hordeum vulgare subsp. vulgare cDNA clone
EBro07_SQ003_N10 5', mRNA sequence
Length = 604
Score = 180 bits (388), Expect = 1e-044
Identities = 68/161 (42%), Positives = 102/161 (63%)
Frame = -1 / +2
Query: 745 NQGMVCDSSFVMDIVVKECGDVFRGLSSLVDVXXXXXXXXXAISTAFPHVQCSVLDLPHV 566
NQG+ + + +++ECGD+F+GL SL D A+ A+PH++C+VLDLP V
Sbjct: 113 NQGLAAHDNLGIATILRECGDIFKGLDSLTDCCGGDGTTARALVKAYPHIKCTVLDLPKV 292
Query: 565 AANAPANTSVKYIAGDMFESIPPADAVFLKWVLHDWGDADCIKILKNCKKAIPSRDAGGK 386
APA+ + Y+AGD+F ++PP+ V LK VLH W D DC+KIL C+KAIP R+ GGK
Sbjct: 293 VEKAPADGVINYVAGDLFHTVPPSQVVMLKLVLHFWSDEDCVKILAQCRKAIPPREEGGK 472
Query: 385 VIIVDMVVGGQSSNIKHKETQVLFDLFIMTINGAERDEHEW 263
VII+++VVG + + ++ L ++ G +RDE+ W
Sbjct: 473 VIIIEIVVGPSLXPVMFEAQLLMDMLMMVNTRGGQRDENHW 595
>gb|BJ468335.1|BJ468335 BJ468335 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags38e18 3', mRNA sequence
Length = 744
Score = 170 bits (366), Expect(2) = 2e-044
Identities = 67/143 (46%), Positives = 93/143 (65%)
Frame = -1 / -3
Query: 610 AFPHVQCSVLDLPHVAANAPANTSVKYIAGDMFESIPPADAVFLKWVLHDWGDADCIKIL 431
A PH++C+VLDLP V A+ V Y+ GD+F ++P A AV LK VLH W D DC+KIL
Sbjct: 640 AHPHIKCTVLDLPKVIDKTSADGIVNYVGGDLFHTVPKAQAVMLKLVLHHWSDDDCVKIL 461
Query: 430 KNCKKAIPSRDAGGKVIIVDMVVGGQSSNIKHKETQVLFDLFIMTINGAERDEHEWKKII 251
CK AIPSR+ GGKVI++D+VV + + ++ L ++ G +R E +W +
Sbjct: 460 TQCKNAIPSREEGGKVIVIDIVVEPSLGPVMFEAQTLMDILMLVFTRGRQRSESDWHVLF 281
Query: 250 SEAGFSDYKIIPVLGVRSIIEVY 182
++AGFSDYKI+ LG R +IEVY
Sbjct: 280 TKAGFSDYKIVKRLGARGVIEVY 212
Score = 29.9 bits (59), Expect(2) = 2e-044
Identities = 9/17 (52%), Positives = 14/17 (82%)
Frame = -1 / -2
Query: 703 VVKECGDVFRGLSSLVD 653
+++EC D+F+GL SL D
Sbjct: 734 IIRECHDLFKGLESLTD 684
>gb|BJ466406.1|BJ466406 BJ466406 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags31p18 3', mRNA sequence
Length = 613
Score = 178 bits (383), Expect = 6e-044
Identities = 69/146 (47%), Positives = 98/146 (67%)
Frame = -1 / -2
Query: 619 ISTAFPHVQCSVLDLPHVAANAPANTSVKYIAGDMFESIPPADAVFLKWVLHDWGDADCI 440
I+ A PHV+C+VLDLP V P++ V Y+AGD+F ++P A AV LK VLH W D DC+
Sbjct: 597 ITKAHPHVKCTVLDLPKVIEKTPSDCVVNYVAGDLFHTVPKAQAVMLKLVLHHWSDDDCV 418
Query: 439 KILKNCKKAIPSRDAGGKVIIVDMVVGGQSSNIKHKETQVLFDLFIMTINGAERDEHEWK 260
KIL CK AIPSR+ GGKVI++D+VV + + ++ L ++ G +R E++W+
Sbjct: 417 KILTQCKNAIPSREEGGKVIVIDIVVEPSLGPVMFEAQTLMDMLMLVFTRGRQRSENDWR 238
Query: 259 KIISEAGFSDYKIIPVLGVRSIIEVY 182
+ +AGF+DYKII +G R +IEVY
Sbjct: 237 DLFMKAGFTDYKIIKKMGARGVIEVY 160
>gb|AV928262.1|AV928262 AV928262 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp.
vulgare cDNA clone basd27k15 3', mRNA sequence
Length = 728
Score = 138 bits (296), Expect(2) = 1e-043
Identities = 57/108 (52%), Positives = 73/108 (67%)
Frame = -1 / -2
Query: 619 ISTAFPHVQCSVLDLPHVAANAPANTSVKYIAGDMFESIPPADAVFLKWVLHDWGDADCI 440
I AF H++C+VLDLP V P++ V Y+AGD+F ++PPA AV LK VLH W D DCI
Sbjct: 703 IVKAFLHIKCNVLDLPKVIDKVPSDGVVNYVAGDLFHTVPPAQAVMLKLVLHFWSDEDCI 524
Query: 439 KILKNCKKAIPSRDAGGKVIIVDMVVGGQSSNIKHKETQVLFDLFIMT 296
IL CKKAIPSR+ GGKVII+D+V+G + I E + +FI T
Sbjct: 523 NILAQCKKAIPSREMGGKVIIIDIVLGSSLATITETELLMDMLMFICT 380
Score = 59.3 bits (123), Expect(2) = 1e-043
Identities = 24/45 (53%), Positives = 30/45 (66%)
Frame = -1 / -2
Query: 310 LFIMTINGAERDEHEWKKIISEAGFSDYKIIPVLGVRSIIEVYP* 176
L + G +R+E EW + +AGFSDYKII LG R +IEVYP*
Sbjct: 397 LMFICTRGRQRNEKEWSMLFMKAGFSDYKIIKKLGHRGVIEVYP* 263
>gb|BJ463550.1|BJ463550 BJ463550 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags32h07 5', mRNA sequence
Length = 540
Score = 155 bits (334), Expect(2) = 7e-043
Identities = 60/127 (47%), Positives = 87/127 (68%)
Frame = -1 / +2
Query: 556 APANTSVKYIAGDMFESIPPADAVFLKWVLHDWGDADCIKILKNCKKAIPSRDAGGKVII 377
+P+ S Y+AGD+F ++PP+ V LK VLH W D DC+KIL C+KAIP R+ GGKVII
Sbjct: 89 SPS*WSXNYVAGDLFHTVPPSQVVMLKLVLHFWSDEDCVKILAQCRKAIPPREEGGKVII 268
Query: 376 VDMVVGGQSSNIKHKETQVLFDLFIMTINGAERDEHEWKKIISEAGFSDYKIIPVLGVRS 197
+++VVG + + ++ L ++ G +RDE+ W ++ +AGF+DYKI+ LG RS
Sbjct: 269 IEIVVGPSLGPVMFEAQLLMDMLMMVNTRGGQRDENHWCELFKKAGFTDYKIVKKLGARS 448
Query: 196 IIEVYP* 176
+IEVYP*
Sbjct: 449 VIEVYP* 469
Score = 39.1 bits (79), Expect(2) = 7e-043
Identities = 13/22 (59%), Positives = 18/22 (81%)
Frame = -1 / +3
Query: 610 AFPHVQCSVLDLPHVAANAPAN 545
A+PH++C+VLDLP V APA+
Sbjct: 36 AYPHIKCTVLDLPKVVEKAPAD 101
>gb|BF253847.2|BF253847 HVSMEf0002E15f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEf0002E15f, mRNA sequence
Length = 822
Score = 174 bits (375), Expect = 7e-043
Identities = 68/165 (41%), Positives = 104/165 (63%)
Frame = -1 / +1
Query: 760 FGELFNQGMVCDSSFVMDIVVKECGDVFRGLSSLVDVXXXXXXXXXAISTAFPHVQCSVL 581
F + N+G+ + + +++ECGD+F+GL SL D A+ A+PH++C+VL
Sbjct: 46 FDAVANEGLAAHDNLGIATILRECGDIFKGLESLTDCCGGDGTTARALVKAYPHIKCTVL 225
Query: 580 DLPHVAANAPANTSVKYIAGDMFESIPPADAVFLKWVLHDWGDADCIKILKNCKKAIPSR 401
DLP V AP + V Y+AGD+F ++P + AV LK VLH W D DC+KIL CKKAIP+
Sbjct: 226 DLPKVIDKAPKDGVVNYVAGDLFHTVPSSQAVMLKLVLHFWSDEDCVKILTQCKKAIPAH 405
Query: 400 DAGGKVIIVDMVVGGQSSNIKHKETQVLFDLFIMTINGAERDEHE 266
D GGK+II+D+V+G I + +++ L + T G +R+E++
Sbjct: 406 DEGGKIIIIDIVIGPYLGPIM*EAQLLMYMLMMETAKGVQRNEND 540
>gb|AV920383.1|AV920383 AV920383 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags13l15 3', mRNA sequence
Length = 682
Score = 134 bits (288), Expect(2) = 1e-042
Identities = 54/102 (52%), Positives = 70/102 (68%)
Frame = -1 / -3
Query: 601 HVQCSVLDLPHVAANAPANTSVKYIAGDMFESIPPADAVFLKWVLHDWGDADCIKILKNC 422
H++C+VLDLP V P++ V Y+AGD+F ++PPA AV LK VLH W D DCI IL C
Sbjct: 677 HIKCNVLDLPKVIDKVPSDGVVNYVAGDLFHTVPPAQAVMLKLVLHFWSDEDCINILAQC 498
Query: 421 KKAIPSRDAGGKVIIVDMVVGGQSSNIKHKETQVLFDLFIMT 296
KKAIPSR+ GGKVII+D+V+G + I E + +FI T
Sbjct: 497 KKAIPSREMGGKVIIIDIVLGSSLATITETELLMDMLMFICT 372
Score = 59.3 bits (123), Expect(2) = 1e-042
Identities = 24/45 (53%), Positives = 30/45 (66%)
Frame = -1 / -3
Query: 310 LFIMTINGAERDEHEWKKIISEAGFSDYKIIPVLGVRSIIEVYP* 176
L + G +R+E EW + +AGFSDYKII LG R +IEVYP*
Sbjct: 389 LMFICTRGRQRNEKEWSMLFMKAGFSDYKIIKKLGHRGVIEVYP* 255
>gb|BF264626.3|BF264626 HV_CEa0009O22f Hordeum vulgare seedling green leaf EST library
HVcDNA0004 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEa0009O22f, mRNA sequence
Length = 877
Score = 155 bits (334), Expect(2) = 2e-042
Identities = 61/102 (59%), Positives = 78/102 (76%)
Frame = -1 / +1
Query: 541 SVKYIAGDMFESIPPADAVFLKWVLHDWGDADCIKILKNCKKAIPSRDAGGKVIIVDMVV 362
+++++AGDMFESIPPADAV LK VLHDWG DC+KIL+ CK+A+P+R AGGKVII+DM
Sbjct: 37 NLRFVAGDMFESIPPADAVLLKNVLHDWGHDDCVKILQRCKEAVPARSAGGKVIIIDMGR 216
Query: 361 GGQSSNIKHKETQVLFDLFIMTINGAERDEHEWKKIISEAGF 236
G + K E + + D+F M NG ERDE EWK+I S+AGF
Sbjct: 217 GSLLGDKKIAEMEAMQDMFAMCTNGVERDESEWKRIFSDAGF 342
Score = 37.7 bits (76), Expect(2) = 2e-042
Identities = 15/22 (68%), Positives = 18/22 (81%)
Frame = -1 / +1
Query: 232 DYKIIPVLGVRSIIEVYP*LFG 167
DYKI+PVLG S+IE+YP* G
Sbjct: 349 DYKIMPVLGPLSVIEIYP*KAG 414
>gb|BJ468058.1|BJ468058 BJ468058 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags30o16 3', mRNA sequence
Length = 674
Score = 172 bits (370), Expect = 4e-042
Identities = 68/146 (46%), Positives = 95/146 (65%)
Frame = -1 / -2
Query: 619 ISTAFPHVQCSVLDLPHVAANAPANTSVKYIAGDMFESIPPADAVFLKWVLHDWGDADCI 440
I+ A PH++C+VLDLP V A+ V Y+ GD+F ++P A AV LK VLH W D DC+
Sbjct: 670 ITKAHPHIKCTVLDLPKVIDKTSADGIVNYVGGDLFHTVPKAQAVMLKLVLHHWSDDDCV 491
Query: 439 KILKNCKKAIPSRDAGGKVIIVDMVVGGQSSNIKHKETQVLFDLFIMTINGAERDEHEWK 260
KIL CK AIPSR+ GGKVI++D+VV + + ++ L ++ G +R E +W
Sbjct: 490 KILTQCKNAIPSREEGGKVIVIDIVVEPSLGPVMFEAQTLMDILMLVFTRGRQRSESDWH 311
Query: 259 KIISEAGFSDYKIIPVLGVRSIIEVY 182
+ ++AGFSDYKI+ LG R +IEVY
Sbjct: 310 VLFTKAGFSDYKIVKRLGARGVIEVY 233
>gb|AV921351.1|AV921351 AV921351 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags23c06 3', mRNA sequence
Length = 657
Score = 170 bits (366), Expect = 1e-041
Identities = 67/143 (46%), Positives = 93/143 (65%)
Frame = -1 / -2
Query: 610 AFPHVQCSVLDLPHVAANAPANTSVKYIAGDMFESIPPADAVFLKWVLHDWGDADCIKIL 431
A PH++C+VLDLP V A+ V Y+ GD+F ++P A AV LK VLH W D DC+KIL
Sbjct: 641 AHPHIKCTVLDLPKVIDKTSADGIVNYVGGDLFHTVPKAQAVMLKLVLHHWSDDDCVKIL 462
Query: 430 KNCKKAIPSRDAGGKVIIVDMVVGGQSSNIKHKETQVLFDLFIMTINGAERDEHEWKKII 251
CK AIPSR+ GGKVI++D+VV + + ++ L ++ G +R E +W +
Sbjct: 461 TQCKNAIPSREEGGKVIVIDIVVEPSLGPVMFEAQTLMDILMLVFTRGRQRSESDWHVLF 282
Query: 250 SEAGFSDYKIIPVLGVRSIIEVY 182
++AGFSDYKI+ LG R +IEVY
Sbjct: 281 TKAGFSDYKIVKRLGARGVIEVY 213
>gb|BQ659524.1|BQ659524 HE01L03u HE Hordeum vulgare subsp. vulgare cDNA clone HE01L03
3-PRIME, mRNA sequence
Length = 533
Score = 150 bits (322), Expect(2) = 5e-041
Identities = 61/95 (64%), Positives = 72/95 (75%)
Frame = -1 / -3
Query: 520 DMFESIPPADAVFLKWVLHDWGDADCIKILKNCKKAIPSRDAGGKVIIVDMVVGGQSSNI 341
DMFESIPPADAV LK VLHDWG DC+KIL+ CK+AIP+R AGGKVII+DMV G +
Sbjct: 531 DMFESIPPADAVLLKNVLHDWGHDDCVKILQRCKEAIPARSAGGKVIIIDMVRGSLLGDK 352
Query: 340 KHKETQVLFDLFIMTINGAERDEHEWKKIISEAGF 236
K E + + D+F M NG ERDE EWK+I S+AGF
Sbjct: 351 KIAEMEAMQDMFAMCTNGVERDESEWKRIFSDAGF 247
Score = 38.2 bits (77), Expect(2) = 5e-041
Identities = 15/22 (68%), Positives = 18/22 (81%)
Frame = -1 / -3
Query: 232 DYKIIPVLGVRSIIEVYP*LFG 167
DYKI+PVLG S+IE+YP* G
Sbjct: 240 DYKIMPVLGPLSVIEIYP*TAG 175
>gb|CB879142.1|CB879142 HP11B09T HP Hordeum vulgare subsp. vulgare cDNA clone HP11B09
5-PRIME, mRNA sequence
Length = 562
Score = 167 bits (359), Expect = 1e-040
Identities = 66/142 (46%), Positives = 90/142 (63%)
Frame = -1 / +2
Query: 766 PAFGELFNQGMVCDSSFVMDIVVKECGDVFRGLSSLVDVXXXXXXXXXAISTAFPHVQCS 587
P ELF++ + + +++EC D+F+G+ SL D AI AFPH++C+
Sbjct: 104 PESDELFHEALAAHDHLGIGTILRECHDLFKGVQSLTDCCGGDGTTARAIVKAFPHIKCN 283
Query: 586 VLDLPHVAANAPANTSVKYIAGDMFESIPPADAVFLKWVLHDWGDADCIKILKNCKKAIP 407
VLDLP V P++ V Y+AGD+F +IPPA + LK VLH W D DCI IL CKKAIP
Sbjct: 284 VLDLPKVIEKVPSDGIVNYVAGDLFHAIPPAQVLMLKLVLHFWSDEDCINILAQCKKAIP 463
Query: 406 SRDAGGKVIIVDMVVGGQSSNI 341
SR+ GGKVI++D+VVG S +
Sbjct: 464 SREMGGKVIVIDIVVGSSSKEM 529
>gb|AV918926.1|AV918926 AV918926 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags22l17 3', mRNA sequence
Length = 655
Score = 166 bits (356), Expect = 3e-040
Identities = 65/140 (46%), Positives = 91/140 (65%)
Frame = -1 / -1
Query: 601 HVQCSVLDLPHVAANAPANTSVKYIAGDMFESIPPADAVFLKWVLHDWGDADCIKILKNC 422
H++C+VLDLP V A+ V Y+ GD+F ++P A AV LK VLH W D DC+KIL C
Sbjct: 634 HIKCTVLDLPKVIDKTSADGIVNYVGGDLFHTVPKAQAVMLKLVLHHWSDDDCVKILTQC 455
Query: 421 KKAIPSRDAGGKVIIVDMVVGGQSSNIKHKETQVLFDLFIMTINGAERDEHEWKKIISEA 242
K AIPSR+ GGKVI++D+VV + + ++ L ++ G +R E +W + ++A
Sbjct: 454 KNAIPSREEGGKVIVIDIVVEPSLGPVMFEAQTLMDILMLVFTRGRQRSESDWHVLFTKA 275
Query: 241 GFSDYKIIPVLGVRSIIEVY 182
GFSDYKI+ LG R +IEVY
Sbjct: 274 GFSDYKIVKRLGARGVIEVY 215
>gb|AV929534.1|AV929534 AV929534 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp.
vulgare cDNA clone basd14j15 3', mRNA sequence
Length = 625
Score = 166 bits (356), Expect = 3e-040
Identities = 64/137 (46%), Positives = 91/137 (66%)
Frame = -1 / -1
Query: 592 CSVLDLPHVAANAPANTSVKYIAGDMFESIPPADAVFLKWVLHDWGDADCIKILKNCKKA 413
C+VLDLP V P++ V Y+AGD+F ++P A AV LK VLH W D DC+KIL CK A
Sbjct: 625 CTVLDLPKVIEKTPSDCVVNYVAGDLFHTVPKAQAVMLKLVLHHWSDDDCVKILTQCKNA 446
Query: 412 IPSRDAGGKVIIVDMVVGGQSSNIKHKETQVLFDLFIMTINGAERDEHEWKKIISEAGFS 233
IPSR+ GGKVI++D+VV + + ++ L ++ G +R E++W+ + +AGF+
Sbjct: 445 IPSREEGGKVIVIDIVVEPSLGPVMFEAQTLMDMLMLVFTRGRQRSENDWRDLFMKAGFT 266
Query: 232 DYKIIPVLGVRSIIEVY 182
DYKII +G R +IEVY
Sbjct: 265 DYKIIKKMGARGVIEVY 215
>gb|CB879386.1|CB879386 HP02A07w HP Hordeum vulgare subsp. vulgare cDNA clone HP02A07
3-PRIME, mRNA sequence
Length = 539
Score = 164 bits (352), Expect = 1e-039
Identities = 66/152 (43%), Positives = 93/152 (61%)
Frame = -1 / -2
Query: 751 LFNQGMVCDSSFVMDIVVKECGDVFRGLSSLVDVXXXXXXXXXAISTAFPHVQCSVLDLP 572
LF++ + + +++EC D+F+G+ SL D AI AFPH++C+VLDLP
Sbjct: 538 LFHEALAAHDHLGIGTILRECHDLFKGVQSLTDCCGGDGTTARAIVKAFPHIKCNVLDLP 359
Query: 571 HVAANAPANTSVKYIAGDMFESIPPADAVFLKWVLHDWGDADCIKILKNCKKAIPSRDAG 392
V P++ V Y+AGD+F +IPPA + LK VLH W D DCI IL CKKAIPSR+ G
Sbjct: 358 KVIEKVPSDGIVNYVAGDLFHAIPPAQVLMLKLVLHFWSDEDCINILAQCKKAIPSREMG 179
Query: 391 GKVIIVDMVVGGQSSNIKHKETQVLFDLFIMT 296
GKVI++D+VVG S + + V + + T
Sbjct: 178 GKVIVIDIVVGSSSKEMLETQLLVDMLMLVCT 83
Database: Hordeum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:16 PM
Number of letters in database: 175,134,539
Number of sequences in database: 312,970
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 552,391,965
Number of Sequences: 312970
Number of extensions: 8917851
Number of successful extensions: 76630
Number of sequences better than 1.0e-020: 206
length of database: 58,378,179
effective HSP length: 53
effective length of database: 41,790,769
effective search space used: 14835722995
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)