TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2306445.2.1
(1074 letters)
Database: Hordeum_nucl_with_EST.fasta
312,970 sequences; 175,134,539 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BU995014.1|BU995014 HM08O20r HM Hordeum vulgare subsp. v... 333 1e-090
gb|BU998986.1|BU998986 HI12N05r HI Hordeum vulgare subsp. v... 323 1e-087
gb|CK122942.1|CK122942 BES1824101g06 BES1824 Hordeum vulgar... 301 5e-085
gb|CD663105.1|CD663105 UCRHV18_04be04_b1 Drought-stressed D... 304 6e-082
gb|BM816972.1|BM816972 HB107D11_SK.ab1 HB Hordeum vulgare s... 204 7e-079
gb|AL507001.1|AL507001 AL507001 Hordeum vulgare Barke devel... 289 2e-077
gb|CB881044.1|CB881044 HM08J17w HM Hordeum vulgare subsp. v... 289 2e-077
gb|BE601667.3|BE601667 HVSMEh0099C03f Hordeum vulgare 5-45 ... 282 2e-075
gb|BM369604.2|BM369604 EBem07_SQ004_B17_R embryo, 28 DPA, n... 259 1e-068
gb|BQ465558.1|BQ465558 HU04A05r HU Hordeum vulgare subsp. v... 235 1e-066
gb|AL507890.1|AL507890 AL507890 Hordeum vulgare Barke devel... 222 8e-066
gb|BI781131.2|BI781131 EBma03_SQ001_I09_R maternal, 8 DPA, ... 247 1e-064
gb|CA024367.1|CA024367 HZ49B19r HZ Hordeum vulgare subsp. v... 246 2e-064
gb|CA028306.1|CA028306 HZ61J14r HZ Hordeum vulgare subsp. v... 246 2e-064
gb|CA022106.1|CA022106 HZ42C22r HZ Hordeum vulgare subsp. v... 158 2e-064
gb|BE422031.1|BE422031 HWM019cB.10r ITEC HWM Barley Leaf Li... 130 4e-063
gb|BM440951.2|BM440951 EBro08_SQ004_P23_R root, 3 week, dro... 228 5e-059
gb|CA015149.1|CA015149 HT13G24r HT Hordeum vulgare subsp. v... 227 6e-059
gb|BU971207.1|BU971207 HB16O21r BC Hordeum vulgare subsp. v... 226 2e-058
gb|BU995730.1|BU995730 HM11D01r HM Hordeum vulgare subsp. v... 195 3e-056
gb|CA005298.1|CA005298 HU11C04u HU Hordeum vulgare subsp. v... 209 6e-056
gb|BU990528.1|BU990528 HF25F03r HF Hordeum vulgare subsp. v... 148 3e-055
gb|BU967312.1|BU967312 HB03O11r BC Hordeum vulgare subsp. v... 211 4e-054
gb|BU973214.1|BU973214 HB24C10r BC Hordeum vulgare subsp. v... 182 4e-053
gb|BQ464213.1|BQ464213 HF01K13T HF Hordeum vulgare subsp. v... 182 9e-051
gb|BJ466264.1|BJ466264 BJ466264 K. Sato unpublished cDNA li... 173 1e-047
gb|BQ464228.1|BQ464228 HF01L04T HF Hordeum vulgare subsp. v... 190 1e-047
gb|BI957523.1|BI957523 HVSMEn0009P18f Hordeum vulgare rachi... 181 3e-047
gb|CA001846.1|CA001846 HS05M05r HS Hordeum vulgare subsp. v... 177 9e-047
gb|CV056271.1|CV056271 BNEL15H10 Barley EST endosperm libra... 177 9e-047
gb|CA001021.1|CA001021 HS05M05u HS Hordeum vulgare subsp. v... 187 9e-047
gb|CB881152.1|CB881152 HM08O20w HM Hordeum vulgare subsp. v... 186 2e-046
gb|CA013229.1|CA013229 HT07M09r HT Hordeum vulgare subsp. v... 177 8e-046
gb|BG343905.2|BG343905 HVSMEg0007B08f Hordeum vulgare pre-a... 184 8e-046
gb|BE421191.1|BE421191 HWM006.G04 ITEC HWM Barley Leaf Libr... 181 6e-045
gb|BQ470305.1|BQ470305 HX02H16r HX Hordeum vulgare subsp. v... 181 6e-045
gb|BQ762722.1|BQ762722 EBro02_SQ004_J20_R root, 3 week, hyd... 181 6e-045
gb|BQ764178.1|BQ764178 EBan01_SQ005_H05 _R anther, yellow s... 181 6e-045
gb|BU997011.1|BU997011 HI06J17r HI Hordeum vulgare subsp. v... 181 6e-045
gb|BU999717.1|BU999717 HI15H15r HI Hordeum vulgare subsp. v... 181 6e-045
gb|CA027036.1|CA027036 HZ57L10r HZ Hordeum vulgare subsp. v... 181 6e-045
gb|CA027334.1|CA027334 HZ58J11r HZ Hordeum vulgare subsp. v... 181 6e-045
gb|BM443042.2|BM443042 EBro02_SQ002_E20_R root, 3 week, hyd... 181 8e-045
gb|CB881884.1|CB881884 HM11D01w HM Hordeum vulgare subsp. v... 178 5e-044
gb|BF255257.2|BF255257 HVSMEf0006G01f Hordeum vulgare seedl... 177 7e-044
gb|BI949154.1|BI949154 HVSMEl0012J08f Hordeum vulgare spike... 177 7e-044
gb|BM369492.2|BM369492 EBem07_SQ003_L23_R embryo, 28 DPA, n... 177 7e-044
gb|BM368454.2|BM368454 EBem08_SQ002_F06_R embryo, 40 DPA, n... 177 7e-044
gb|CA007409.1|CA007409 HU07O02r HU Hordeum vulgare subsp. v... 177 7e-044
gb|CA007733.1|CA007733 HU08N16r HU Hordeum vulgare subsp. v... 176 2e-043
gb|BE603237.2|BE603237 HVSMEh0102L08f Hordeum vulgare 5-45 ... 174 9e-043
gb|BQ659780.1|BQ659780 HF01L04w HF Hordeum vulgare subsp. v... 172 3e-042
gb|BE216058.3|BE216058 HV_CEb0009E12f Hordeum vulgare seedl... 149 6e-041
gb|BU997332.1|BU997332 HI07K19r HI Hordeum vulgare subsp. v... 166 3e-040
gb|BJ476288.1|BJ476288 BJ476288 K. Sato unpublished cDNA li... 116 2e-039
gb|BG417568.2|BG417568 HVSMEk0018D06f Hordeum vulgare testa... 160 9e-039
gb|BF257627.2|BF257627 HVSMEf0013G08f Hordeum vulgare seedl... 156 2e-037
gb|BQ660739.1|BQ660739 HI05D11u HI Hordeum vulgare subsp. v... 154 8e-037
gb|BQ657865.1|BQ657865 HA06K24u HA Hordeum vulgare subsp. v... 138 5e-036
gb|BM442576.2|BM442576 EBan01_SQ003_J04_R anther, yellow st... 148 6e-035
gb|BI776244.2|BI776244 EBem04_SQ001_C10_R embryo, 12 DPA, n... 148 6e-035
gb|BJ467871.1|BJ467871 BJ467871 K. Sato unpublished cDNA li... 120 9e-035
gb|BJ468432.1|BJ468432 BJ468432 K. Sato unpublished cDNA li... 120 9e-035
gb|BQ472007.1|BQ472007 HV04C10r HV Hordeum vulgare subsp. v... 146 2e-034
gb|BQ470673.1|BQ470673 HX03K21r HX Hordeum vulgare subsp. v... 117 1e-033
gb|BM101220.2|BM101220 EBpi01_SQ003_D21_R pistil, 1 DPA, no... 142 4e-033
gb|BF260665.2|BF260665 HVSMEf0022J21f Hordeum vulgare seedl... 120 9e-033
gb|CA014730.1|CA014730 HT12D03r HT Hordeum vulgare subsp. v... 118 2e-032
gb|BM372430.2|BM372430 EBro03_SQ004_O24_R root, 3 week, wat... 94 7e-032
gb|CA012605.1|CA012605 HT05O13r HT Hordeum vulgare subsp. v... 137 1e-031
gb|BU994916.1|BU994916 HM08J17r HM Hordeum vulgare subsp. v... 137 1e-031
gb|CB860151.1|CB860151 HI12N05w HI Hordeum vulgare subsp. v... 136 2e-031
gb|BQ663777.1|BQ663777 HU04A05u HU Hordeum vulgare subsp. v... 133 1e-030
gb|CB860120.1|CB860120 HI12L17w HI Hordeum vulgare subsp. v... 133 1e-030
gb|BQ768076.1|BQ768076 EBro08_SQ010_J18_R root, 3 week, dro... 133 2e-030
gb|BF622029.2|BF622029 HVSMEa0001J05f Hordeum vulgare seedl... 116 3e-030
gb|CB877519.1|CB877519 HP05D20T HP Hordeum vulgare subsp. v... 120 3e-030
gb|CB881802.1|CB881802 HM10O18w HM Hordeum vulgare subsp. v... 128 4e-029
gb|BU988066.1|BU988066 HF16J03r HF Hordeum vulgare subsp. v... 110 5e-029
gb|AL500395.1|AL500395 AL500395 Hordeum vulgare Barke etiol... 120 1e-027
gb|BU996862.1|BU996862 HI06A24r HI Hordeum vulgare subsp. v... 67 1e-027
gb|BM815941.1|BM815941 HC105C11_T3.ab1 HC Hordeum vulgare s... 99 2e-027
gb|BI780170.2|BI780170 EBma08_SQ001_J16_R maternal, 28 DPA,... 99 2e-027
gb|BQ762508.1|BQ762508 EBro02_SQ004_H03_R root, 3 week, hyd... 72 3e-027
gb|BU984852.1|BU984852 HF05D22r HF Hordeum vulgare subsp. v... 106 3e-027
gb|BF268067.2|BF268067 HV_CEa0019M06f Hordeum vulgare seedl... 100 7e-027
gb|BG301135.1|BG301135 HVSMEb0019K22f Hordeum vulgare seedl... 100 7e-027
gb|BQ665188.1|BQ665188 HX02H16u HX Hordeum vulgare subsp. v... 121 9e-027
gb|BQ764250.1|BQ764250 EBan01_SQ005_F10_R anther, yellow st... 119 2e-026
gb|BF255316.2|BF255316 HVSMEf0006I13f Hordeum vulgare seedl... 114 3e-026
gb|BQ764434.1|BQ764434 EBan01_SQ005_I22_R anther, yellow st... 118 6e-026
gb|AV930648.1|AV930648 AV930648 K. Sato unpublished cDNA li... 117 1e-025
gb|CD664159.1|CD664159 UCRHV18_07df05_b1 Drought-stressed D... 117 1e-025
gb|CD664181.1|CD664181 UCRHV18_07dh12_b1 Drought-stressed D... 117 1e-025
gb|BQ760767.1|BQ760767 EBro03_SQ003_G16_R root, 3 week, wat... 116 2e-025
gb|BQ763819.1|BQ763819 EBro03_SQ005_B16_R root, 3 week, wat... 115 6e-025
gb|BI948458.1|BI948458 HVSMEl0009K16f Hordeum vulgare spike... 98 1e-024
gb|BU987042.1|BU987042 HF13K08r HF Hordeum vulgare subsp. v... 113 1e-024
gb|CA006677.1|CA006677 HU05G06r HU Hordeum vulgare subsp. v... 67 3e-024
gb|AL505539.1|AL505539 AL505539 Hordeum vulgare Barke roots... 70 5e-024
gb|BJ463699.1|BJ463699 BJ463699 K. Sato unpublished cDNA li... 88 1e-023
gb|BJ475221.1|BJ475221 BJ475221 K. Sato unpublished cDNA li... 110 1e-023
gb|BU995494.1|BU995494 HM10G20r HM Hordeum vulgare subsp. v... 79 9e-023
gb|BQ468598.1|BQ468598 HM01L13T HM Hordeum vulgare subsp. v... 105 6e-022
gb|BQ468601.1|BQ468601 HM01L17T HM Hordeum vulgare subsp. v... 105 6e-022
gb|BQ661058.1|BQ661058 HM01L17w HM Hordeum vulgare subsp. v... 105 6e-022
gb|BI948576.1|BI948576 HVSMEl0010C03f Hordeum vulgare spike... 104 8e-022
gb|BG414466.2|BG414466 HVSMEk0002J11f Hordeum vulgare testa... 64 3e-021
gb|BQ470982.1|BQ470982 HX04J23r HX Hordeum vulgare subsp. v... 79 4e-021
gb|AV934764.1|AV934764 AV934764 K. Sato unpublished cDNA li... 78 5e-021
gb|BJ547408.1|BJ547408 BJ547408 K. Sato unpublished cDNA li... 78 5e-021
gb|BF263740.2|BF263740 HV_CEa0007I15f Hordeum vulgare seedl... 79 5e-021
>gb|BU995014.1|BU995014 HM08O20r HM Hordeum vulgare subsp. vulgare cDNA clone HM08O20
5-PRIME, mRNA sequence
Length = 615
Score = 333 bits (721), Expect = 1e-090
Identities = 137/158 (86%), Positives = 150/158 (94%)
Frame = -3 / +2
Query: 1072 SSVSGGGLSQNGRFSYGYASSPGKRASMEDFYETKIDCVDGQIVGLFGVFDGHGGAKVAE 893
S VSGGGLSQN +FSYGYASS GKRASMEDFYET+I+ VDGQ++GLFGVFDGHGGAKVAE
Sbjct: 140 SPVSGGGLSQNSKFSYGYASSLGKRASMEDFYETRIESVDGQLIGLFGVFDGHGGAKVAE 319
Query: 892 YVKENLFNNLVSHPKFISDTKVAIDDAYKSTDSEFLESDSSQNQCGSTASTAVLVGDRLF 713
YVK NLF++L+ HPKF+SDTKVAIDD+YKSTDSEFLESDS+QNQCGSTASTAVLVGDRLF
Sbjct: 320 YVKHNLFSHLLRHPKFMSDTKVAIDDSYKSTDSEFLESDSTQNQCGSTASTAVLVGDRLF 499
Query: 712 VANVGDSRAIICREGNAIAVSKDHKPDQTDERQRIEDA 599
VANVGDSRAIICR GNA+ VSKDHKPDQTDERQRIE+A
Sbjct: 500 VANVGDSRAIICRAGNAVPVSKDHKPDQTDERQRIEEA 613
Score = 261 bits (564), Expect = 6e-069
Identities = 116/157 (73%), Positives = 126/157 (80%)
Frame = +2 / -3
Query: 599 SIFNTLPLISLIRLVIL*NSNSISFPAYDSPRVTNICDEETITNKYSS*CS*PTLILTTV 778
S FNTLPLI LIRLVI N SIS PAYDSP V+NICD+ETITNKYSS*C *PTL+L+TV
Sbjct: 613 SFFNTLPLICLIRLVIFRNRYSISCPAYDSPGVSNICDKETITNKYSS*CG*PTLVLSTV 434
Query: 779 RF*EFTVGAFISIIYSDFSITDELWMTNKIVEQVFFNILCYLSTTMTIKNSKKTNYLAIN 958
RF E TVG FI IIYS F +T ELWM K+ E+V F+ILCY STTMTIKNSK TN L I+
Sbjct: 433 RFQELTVGTFIRIIYSHFCVTHELWMPKKMAEEVVFHILCYFSTTMTIKNSK*TNKLPID 254
Query: 959 TINFCLIEVFHGCPFTRGACIAIAKSTILAEAAAADG 1069
T N CLI+VFHG PFT GA I IAK TILAEAAAADG
Sbjct: 253 TFNSCLIKVFHGSPFTEGARITIAKLTILAEAAAADG 143
Score = 196 bits (422), Expect = 2e-049
Identities = 102/159 (64%), Positives = 115/159 (72%)
Frame = -1 / +3
Query: 1074 DPPSAAAASARMVDLAMAMQAPLVKGHPWKTSMRQKLIVLMARXXXXXXXXXXXXXLR*Q 895
D PSAAAASAR+V LAM M+AP VKG PWKT MRQ+L V M L+*Q
Sbjct: 138 DRPSAAAASARIVSLAMVMRAPSVKGLPWKTFMRQELKVSMGSLLVYLEFLMVMVVLK*Q 317
Query: 894 SMLKKTCSTILLVIQSSSVILKSL*MMLIKAPTVNS*NLTVVKINVGQLHQLLYLLVIVS 715
SM T S I L IQSS V K L*M+LIK PTV+S NLTV+K +VGQ HQLLYLLVIVS
Sbjct: 318 SM*NTTSSAIFLGIQSS*VTQKWL*MILIKVPTVSSWNLTVLKTSVGQPHQLLYLLVIVS 497
Query: 714 SSQMLVTLGLSYAGKEMLLLFQRITSLIKLMSGSVLKML 598
SQML T GLSYAG+EML LF++ITSLI+ MSG+VLK L
Sbjct: 498 LSQMLETPGLSYAGQEMLYLFRKITSLIRQMSGNVLKKL 614
Score = 160 bits (344), Expect(2) = 1e-055
Identities = 73/104 (70%), Positives = 83/104 (79%)
Frame = -2 / +1
Query: 908 C*GSRVC*RKPVQQSC*SSKVHQ*Y*SRYR*CL*KHRQ*ILRI*Q*SKSMWVNCINCCTC 729
C* SRVC +P+Q S *+SKVH+*+ S YR* L*K+RQ*+L I*Q SK +WVN INCCTC
Sbjct: 304 C*SSRVCETQPLQPSS*ASKVHE*HKSGYR*FL*KYRQ*VLGI*QYSKPVWVNRINCCTC 483
Query: 728 W*SSLRRKCW*L*GYHMQGRKCYCCFKGSQA*SN**AAAY*RCW 597
W*SSL RKCW L GYHMQGRKC CF+ SQA*S+ *AA Y*R W
Sbjct: 484 W*SSLCRKCWRLQGYHMQGRKCCTCFERSQA*SDR*AATY*RSW 615
Score = 159 bits (341), Expect(3) = 5e-049
Identities = 75/104 (72%), Positives = 77/104 (74%)
Frame = +3 / -1
Query: 597 PASSIRCRSSV*SGL*SFETAIAFPSLHMIALESPTFATKRRSPTSTAVDAVDPH*F*LL 776
PASSIRCRSSV*SGL*SFET AFP+LHMIALESPTFATKRRSPTSTAVDAVDPH F*+L
Sbjct: 615 PASSIRCRSSV*SGL*SFETGTAFPALHMIALESPTFATKRRSPTSTAVDAVDPHWF*VL 436
Query: 777 SDSKNXXXXXXXXXXXXXXXXXMNFG*LTRLLNRFSLTYSATLA 908
SDSKN MNFG L R L R TYSATLA
Sbjct: 435 SDSKNSLSVLL*ESSIATFVSLMNFGCLRRWLKRLCFTYSATLA 304
Score = 145 bits (312), Expect(2) = 1e-036
Identities = 67/94 (71%), Positives = 72/94 (76%)
Frame = +1 / -2
Query: 598 QHLQYAAAHQFDQACDPLKQQ*HFLPCI**P*SHQHLRRRDDHQQVQQLMQLTHIDFDYC 777
Q LQY AAH DQACD KQ HFLPCI**P S QHLR+RDDHQQVQQLM+LTH F+YC
Sbjct: 614 QLLQYVAAHLSDQACDLSKQVQHFLPCI**PWSLQHLRQRDDHQQVQQLMRLTHTGFEYC 435
Query: 778 QILRIHCRCFYKHHL*RL*YH**TLDD*QDC*TG 879
QI R HCR FYK+HL* L H *TLD *+D * G
Sbjct: 434 QIPRTHCRYFYKNHL*PLLCHS*TLDA*EDG*RG 333
Score = 77.1 bits (162), Expect(2) = 1e-055
Identities = 33/41 (80%), Positives = 35/41 (85%)
Frame = -2 / +1
Query: 1073 ILRQRRRPQPEW*I*LWLCKLPW*KGIHGRLL*DKN*LC*W 951
I RQRRRPQPE *+*LWLC+LP *KG HGRLL*DKN* C W
Sbjct: 139 IARQRRRPQPE**V*LWLCELPR*KGFHGRLL*DKN*KCRW 261
Score = 44.1 bits (90), Expect(3) = 5e-049
Identities = 14/21 (66%), Positives = 18/21 (85%)
Frame = +1 / -2
Query: 946 SGHQHNQFLSHRSLPWMPFYQ 1008
+ H+H QFLSH+SLPW PFY+
Sbjct: 266 AAHRHFQFLSHKSLPWKPFYR 204
Score = 30.4 bits (60), Expect(3) = 5e-049
Identities = 10/11 (90%), Positives = 10/11 (90%)
Frame = +3 / -1
Query: 1041 FWLRPPPLTED 1073
FWLRPPPLT D
Sbjct: 171 FWLRPPPLTGD 139
Score = 28.1 bits (55), Expect(2) = 1e-036
Identities = 13/16 (81%), Positives = 14/16 (87%)
Frame = +3 / -1
Query: 951 PSTQSIFVS*KSSMDA 998
PST SI VS*KSSM+A
Sbjct: 261 PSTLSILVS*KSSMEA 214
>gb|BU998986.1|BU998986 HI12N05r HI Hordeum vulgare subsp. vulgare cDNA clone HI12N05
5-PRIME, mRNA sequence
Length = 600
Score = 323 bits (700), Expect = 1e-087
Identities = 133/154 (86%), Positives = 145/154 (94%)
Frame = -3 / +2
Query: 1072 SSVSGGGLSQNGRFSYGYASSPGKRASMEDFYETKIDCVDGQIVGLFGVFDGHGGAKVAE 893
S VSGGGLSQN +FSYGYASS GKRASMEDFYET+I+ VDGQ++GLFGVFDGHGGAKVAE
Sbjct: 137 SPVSGGGLSQNSKFSYGYASSLGKRASMEDFYETRIESVDGQLIGLFGVFDGHGGAKVAE 316
Query: 892 YVKENLFNNLVSHPKFISDTKVAIDDAYKSTDSEFLESDSSQNQCGSTASTAVLVGDRLF 713
YVK NLF++L+ HPKF+SDTKVAIDD+YKSTDSEFLESDS+QNQCGSTASTAVLVGDRLF
Sbjct: 317 YVKHNLFSHLLRHPKFMSDTKVAIDDSYKSTDSEFLESDSTQNQCGSTASTAVLVGDRLF 496
Query: 712 VANVGDSRAIICREGNAIAVSKDHKPDQTDERQR 611
VANVGDS AIICR GNA+ VSKDHKPDQTDERQR
Sbjct: 497 VANVGDSXAIICRAGNAVPVSKDHKPDQTDERQR 598
Score = 249 bits (539), Expect = 2e-065
Identities = 112/153 (73%), Positives = 122/153 (79%)
Frame = +2 / -3
Query: 611 TLPLISLIRLVIL*NSNSISFPAYDSPRVTNICDEETITNKYSS*CS*PTLILTTVRF*E 790
TLPLI LIRLVI N SIS PAYDS V+NICD+ETITNKYSS*C *PTL+L+TVRF E
Sbjct: 598 TLPLICLIRLVIFRNRYSISCPAYDSXGVSNICDKETITNKYSS*CG*PTLVLSTVRFQE 419
Query: 791 FTVGAFISIIYSDFSITDELWMTNKIVEQVFFNILCYLSTTMTIKNSKKTNYLAINTINF 970
TVG FI IIYS F +T ELWM K+ E+V F+ILCY STTMTIKNSK TN L I+T N
Sbjct: 418 LTVGTFIRIIYSHFCVTHELWMPKKMAEEVVFHILCYFSTTMTIKNSK*TNKLPIDTFNS 239
Query: 971 CLIEVFHGCPFTRGACIAIAKSTILAEAAAADG 1069
CLI+VFHG PFT GA I IAK TILAEAAAADG
Sbjct: 238 CLIKVFHGSPFTEGARITIAKLTILAEAAAADG 140
Score = 187 bits (403), Expect = 9e-047
Identities = 98/155 (63%), Positives = 111/155 (71%)
Frame = -1 / +3
Query: 1074 DPPSAAAASARMVDLAMAMQAPLVKGHPWKTSMRQKLIVLMARXXXXXXXXXXXXXLR*Q 895
D PSAAAASAR+V LAM M+AP VKG PWKT MRQ+L V M L+*Q
Sbjct: 135 DRPSAAAASARIVSLAMVMRAPSVKGLPWKTFMRQELKVSMGSLLVYLEFLMVMVVLK*Q 314
Query: 894 SMLKKTCSTILLVIQSSSVILKSL*MMLIKAPTVNS*NLTVVKINVGQLHQLLYLLVIVS 715
SM T S I L IQSS V K L*M+LIK PTV+S NLTV+K +VGQ HQLLYLLVIVS
Sbjct: 315 SM*NTTSSAIFLGIQSS*VTQKWL*MILIKVPTVSSWNLTVLKTSVGQPHQLLYLLVIVS 494
Query: 714 SSQMLVTLGLSYAGKEMLLLFQRITSLIKLMSGSV 610
SQML T LSYAG+EML LF++ITSLI+ MSG+V
Sbjct: 495 LSQMLETPXLSYAGQEMLYLFRKITSLIRQMSGNV 599
Score = 150 bits (322), Expect(3) = 2e-046
Identities = 71/100 (71%), Positives = 73/100 (73%)
Frame = +3 / -1
Query: 609 IRCRSSV*SGL*SFETAIAFPSLHMIALESPTFATKRRSPTSTAVDAVDPH*F*LLSDSK 788
IRCRSSV*SGL*SFET AFP+LHMIALESPTFATKRRSPTSTAVDAVDPH F*+LSDSK
Sbjct: 600 IRCRSSV*SGL*SFETGTAFPALHMIALESPTFATKRRSPTSTAVDAVDPHWF*VLSDSK 421
Query: 789 NXXXXXXXXXXXXXXXXXMNFG*LTRLLNRFSLTYSATLA 908
N MNFG L R L R TYSATLA
Sbjct: 420 NSLSVLL*ESSIATFVSLMNFGCLRRWLKRLCFTYSATLA 301
Score = 149 bits (321), Expect(2) = 2e-052
Identities = 69/100 (69%), Positives = 79/100 (79%)
Frame = -2 / +1
Query: 908 C*GSRVC*RKPVQQSC*SSKVHQ*Y*SRYR*CL*KHRQ*ILRI*Q*SKSMWVNCINCCTC 729
C* SRVC +P+Q S *+SKVH+*+ S YR* L*K+RQ*+L I*Q SK +WVN INCCTC
Sbjct: 301 C*SSRVCETQPLQPSS*ASKVHE*HKSGYR*FL*KYRQ*VLGI*QYSKPVWVNRINCCTC 480
Query: 728 W*SSLRRKCW*L*GYHMQGRKCYCCFKGSQA*SN**AAAY 609
W*SSL RKCW L YHMQGRKC CF+ SQA*S+ *AA Y
Sbjct: 481 W*SSLCRKCWRLQXYHMQGRKCCTCFERSQA*SDR*AATY 600
Score = 136 bits (292), Expect(2) = 6e-034
Identities = 63/90 (70%), Positives = 68/90 (75%)
Frame = +1 / -2
Query: 610 YAAAHQFDQACDPLKQQ*HFLPCI**P*SHQHLRRRDDHQQVQQLMQLTHIDFDYCQILR 789
Y AAH DQACD KQ HFLPCI** S QHLR+RDDHQQVQQLM+LTH F+YCQI R
Sbjct: 599 YVAAHLSDQACDLSKQVQHFLPCI**XWSLQHLRQRDDHQQVQQLMRLTHTGFEYCQIPR 420
Query: 790 IHCRCFYKHHL*RL*YH**TLDD*QDC*TG 879
HCR FYK+HL* L H *TLD *+D * G
Sbjct: 419 THCRYFYKNHL*PLLCHS*TLDA*EDG*RG 330
Score = 77.1 bits (162), Expect(2) = 2e-052
Identities = 33/41 (80%), Positives = 35/41 (85%)
Frame = -2 / +1
Query: 1073 ILRQRRRPQPEW*I*LWLCKLPW*KGIHGRLL*DKN*LC*W 951
I RQRRRPQPE *+*LWLC+LP *KG HGRLL*DKN* C W
Sbjct: 136 IARQRRRPQPE**V*LWLCELPR*KGFHGRLL*DKN*KCRW 258
Score = 44.1 bits (90), Expect(3) = 2e-046
Identities = 14/21 (66%), Positives = 18/21 (85%)
Frame = +1 / -2
Query: 946 SGHQHNQFLSHRSLPWMPFYQ 1008
+ H+H QFLSH+SLPW PFY+
Sbjct: 263 AAHRHFQFLSHKSLPWKPFYR 201
Score = 30.4 bits (60), Expect(3) = 2e-046
Identities = 10/11 (90%), Positives = 10/11 (90%)
Frame = +3 / -1
Query: 1041 FWLRPPPLTED 1073
FWLRPPPLT D
Sbjct: 168 FWLRPPPLTGD 136
Score = 28.1 bits (55), Expect(2) = 6e-034
Identities = 13/16 (81%), Positives = 14/16 (87%)
Frame = +3 / -1
Query: 951 PSTQSIFVS*KSSMDA 998
PST SI VS*KSSM+A
Sbjct: 258 PSTLSILVS*KSSMEA 211
>gb|CK122942.1|CK122942 BES1824101g06 BES1824 Hordeum vulgare subsp. vulgare cDNA clone
MPMGp2010G061 5-PRIME, mRNA sequence
Length = 774
Score = 301 bits (651), Expect(2) = 5e-085
Identities = 127/162 (78%), Positives = 143/162 (88%)
Frame = -3 / +1
Query: 775 SSQNQCGSTASTAVLVGDRLFVANVGDSRAIICREGNAIAVSKDHKPDQTDERQRIEDAG 596
S GSTASTA+LVG RL VANVGDSRA++ + G AIAVS+DHKPDQTDERQRIE+AG
Sbjct: 286 SHTRDAGSTASTAILVGGRLVVANVGDSRAVVSKGGKAIAVSRDHKPDQTDERQRIEEAG 465
Query: 595 GFVMWAGTWRVGGVLAVSRAFGDKLLKQYVVVDPEIREEVVDDTLEFLILASDGLWDVVS 416
GFVMWAGTWRVGGVLAVSRAFGDKLLKQYVV DPEI+EEVVD +LEFLILASDGLWDVV+
Sbjct: 466 GFVMWAGTWRVGGVLAVSRAFGDKLLKQYVVADPEIKEEVVDSSLEFLILASDGLWDVVT 645
Query: 415 NEEAVAMTRSIQDPEEAAKMLLQEAYKRESSDNITCVVVHFL 290
N+EAVAM + I+DPE+AAK LLQEA +R S+DNIT V+V FL
Sbjct: 646 NDEAVAMVKPIEDPEQAAKGLLQEASRRGSADNITVVIVRFL 771
Score = 221 bits (478), Expect(2) = 2e-071
Identities = 105/156 (67%), Positives = 111/156 (71%)
Frame = +3 / -2
Query: 291 KKCTTTQVMLSLLSLLYASCKSIFAASSGS*MDLVIATASSLETTSHSPSLARIRNXXXX 470
KK T T VMLS L L AS S FAA SGS + L +ATASSL TTSHSPSLAR+RN
Sbjct: 770 KKRTMTTVMLSALPLREAS*SSPFAACSGSSIGLTMATASSLVTTSHSPSLARMRNSSEL 591
Query: 471 XXXXXXXXXXXXXYCFKSLSPKARETASTPPTRHVPAHITKPPASSIRCRSSV*SGL*SF 650
YCFKSLSPKARETA TPPTRHVPAHITKPPASSI C SSV SGL*S
Sbjct: 590 STTSSLISGSATTYCFKSLSPKARETARTPPTRHVPAHITKPPASSILCLSSVWSGL*SL 411
Query: 651 ETAIAFPSLHMIALESPTFATKRRSPTSTAVDAVDP 758
ETAIAFP L ALESPTFAT +R PT AV+AV+P
Sbjct: 410 ETAIAFPPLETTALESPTFATTKRPPTRIAVEAVEP 303
Score = 177 bits (380), Expect(2) = 8e-049
Identities = 67/110 (60%), Positives = 90/110 (81%)
Frame = -3 / +1
Query: 1057 GGLSQNGRFSYGYASSPGKRASMEDFYETKIDCVDGQIVGLFGVFDGHGGAKVAEYVKEN 878
GG+S+ GRFSYG+AS GKRASMEDFYET++D VDG+ VGLFGVFDGHGGA+ AEYVK++
Sbjct: 1 GGISEKGRFSYGFASCAGKRASMEDFYETRVDDVDGETVGLFGVFDGHGGARAAEYVKKH 180
Query: 877 LFNNLVSHPKFISDTKVAIDDAYKSTDSEFLESDSSQNQCGSTASTAVLV 728
LF+NL+ HPKF++DTK AI + + TDSEFL++DSS + + ++ ++
Sbjct: 181 LFSNLIKHPKFMTDTKAAIAETFNHTDSEFLKADSSHTRDAGSTASTAIL 330
Score = 155 bits (332), Expect(3) = 4e-043
Identities = 71/159 (44%), Positives = 103/159 (64%)
Frame = +2 / -1
Query: 287 MQEVHDDASYVVTALPLVRLLQEHLCSLFWVLNGSSHRDSFLVRDHIPQPITCKDKKLEC 466
+QE ++D VV+ P L+ L L W+L H +SF+V +IPQP+T +D++ E
Sbjct: 774 VQEANNDDGDVVSTAPSGSFLK*SLRCLLWILYWLDHGNSFIVSYNIPQPVTSEDEEFE* 595
Query: 467 VINNLLSDLRIHNHILL*EFVTKSTRNSKYTTNAPCSCPHHKTSSIFNTLPLISLIRLVI 646
+++LL DL + +ILL*+F+TK +RNSK TTN PC PHHK SS N+L L+ L+R VI
Sbjct: 594 AVDHLLLDLWVSYNILL*KFITKGSRNSKNTTNTPCPSPHHKASSFLNSLSLVCLVRFVI 415
Query: 647 L*NSNSISFPAYDSPRVTNICDEETITNKYSS*CS*PTL 763
N NS+ +S R+TNIC+ +T T+K S * S* ++
Sbjct: 414 PGNRNSLPSFRNNSSRITNICNHQTTTDKNSC*GS*ASI 298
Score = 68.4 bits (143), Expect(2) = 2e-071
Identities = 33/97 (34%), Positives = 50/97 (51%)
Frame = +2 / -1
Query: 767 LTTVRF*EFTVGAFISIIYSDFSITDELWMTNKIVEQVFFNILCYLSTTMTIKNSKKTNY 946
+ T+ F + +G S I E M + I E+V +I S+T+TIK +K+ N
Sbjct: 291 VATISFQKL*IGMIECFSNSSLCICHEFRMLD*IAEKVLLHIFSCSSSTVTIKYAKQPNS 112
Query: 947 LAINTINFCLIEVFHGCPFTRGACIAIAKSTILAEAA 1057
L+IN I+ CL+E+ H CPF AC I + + A
Sbjct: 111 LSINIIHSCLVEILH*CPFPSTACEPITEPAFFTDPA 1
Score = 40.5 bits (82), Expect(2) = 8e-049
Identities = 26/71 (36%), Positives = 35/71 (49%)
Frame = -2 / +3
Query: 524 TLKAICGCGSGDPRGGC**HTRVSYPCK*WAVGCGL*RGSCRDD*IHSGPRRGCKDALAR 345
T KA+C D GG TR+ +P * AVGC *R SC + G R + +R
Sbjct: 537 TFKAVCCS*PRDQGGGGRQLTRIPHPR**RAVGCCN*R*SCCHGQANRGSRASSEGTTSR 716
Query: 344 GVQEGEQ*QHN 312
+G+ *QH+
Sbjct: 717 SFPKGQC*QHH 749
Score = 37.3 bits (75), Expect(2) = 5e-085
Identities = 16/28 (57%), Positives = 19/28 (67%)
Frame = -2 / +3
Query: 1028 LWLCKLPW*KGIHGRLL*DKN*LC*WPD 945
LW+ KL W KGI+G L DK+ C*W D
Sbjct: 30 LWVRKLCWEKGINGGFLRDKSG*C*WRD 113
Score = 29.5 bits (58), Expect(3) = 4e-043
Identities = 11/19 (57%), Positives = 13/19 (68%)
Frame = +1 / -3
Query: 952 HQHNQFLSHRSLPWMPFYQ 1008
HQH+ LS R+ P MPF Q
Sbjct: 106 HQHHPLLSRRNPPLMPFSQ 50
Score = 29.5 bits (58), Expect(3) = 4e-043
Identities = 17/46 (36%), Positives = 19/46 (41%)
Frame = +3 / -2
Query: 771 LLSDSKNXXXXXXXXXXXXXXXXXMNFG*LTRLLNRFSLTYSATLA 908
LLS +N MNFG L +LL R TYSA A
Sbjct: 287 LLSAFRNSESV*LNVSAIAAFVSVMNFGCLIKLLKRCFFTYSAARA 150
>gb|CD663105.1|CD663105 UCRHV18_04be04_b1 Drought-stressed Dicktoo barley epidermis cDNA
library Hordeum vulgare subsp. vulgare cDNA clone
UCRHV18_04be04, mRNA sequence
Length = 770
Score = 304 bits (658), Expect = 6e-082
Identities = 130/152 (85%), Positives = 138/152 (90%)
Frame = -3 / -1
Query: 676 REGNAIAVSKDHKPDQTDERQRIEDAGGFVMWAGTWRVGGVLAVSRAFGDKLLKQYVVVD 497
R GNA+ VSKDHKPDQTDERQRIE+AGGFVMWAGTWRVGGVLAVSRAFGDKLLKQYVVVD
Sbjct: 770 RAGNAVPVSKDHKPDQTDERQRIEEAGGFVMWAGTWRVGGVLAVSRAFGDKLLKQYVVVD 591
Query: 496 PEIREEVVDDTLEFLILASDGLWDVVSNEEAVAMTRSIQDPEEAAKMLLQEAYKRESSDN 317
PEIREE+VD++LEFLILASDGLWDVVSNEEAV MTRSIQDPEEAAK LLQEAYKRESSDN
Sbjct: 590 PEIREEIVDESLEFLILASDGLWDVVSNEEAVDMTRSIQDPEEAAKRLLQEAYKRESSDN 411
Query: 316 ITCVVVHFLHGQGSSGYA*SVAVKLFYAVVCS 221
ITCVVV F HGQGSSG A*S +L + C+
Sbjct: 410 ITCVVVRFFHGQGSSGPA*SRCEELLTSGRCT 315
Score = 227 bits (490), Expect = 9e-059
Identities = 105/139 (75%), Positives = 111/139 (79%)
Frame = +3 / +1
Query: 258 L*AYPLLPCPCKKCTTTQVMLSLLSLLYASCKSIFAASSGS*MDLVIATASSLETTSHSP 437
L*A PLLP P KK TTTQVMLSLLS L ASCKS+FAASSGS +D V++TASSLETTS SP
Sbjct: 352 L*AGPLLP*PWKKRTTTQVMLSLLSRL*ASCKSLFAASSGSCIDRVMSTASSLETTSQSP 531
Query: 438 SLARIRNXXXXXXXXXXXXXXXXXYCFKSLSPKARETASTPPTRHVPAHITKPPASSIRC 617
SLAR+RN YCFKSLSPKARETASTPPTRHVPAHITKPPASSIRC
Sbjct: 532 SLARMRNSRDSSTISSRISGSTTTYCFKSLSPKARETASTPPTRHVPAHITKPPASSIRC 711
Query: 618 RSSV*SGL*SFETAIAFPS 674
RSSV*SGL*SFET AFP+
Sbjct: 712 RSSV*SGL*SFETGTAFPA 768
Score = 221 bits (478), Expect = 4e-057
Identities = 100/146 (68%), Positives = 111/146 (76%)
Frame = +2 / +3
Query: 239 K*FYCYALSVSAATLPMQEVHDDASYVVTALPLVRLLQEHLCSLFWVLNGSSHRDSFLVR 418
+* + ALS A L M+E H+DA YVVTALPLV LLQE L S WVL H DS LVR
Sbjct: 333 E*LFAPALSGPATPLTMEEAHNDAGYVVTALPLVGLLQEPLRSFLWVLYRPGHVDSLLVR 512
Query: 419 DHIPQPITCKDKKLECVINNLLSDLRIHNHILL*EFVTKSTRNSKYTTNAPCSCPHHKTS 598
DHIP+ I CKD+KL+ +IN+ L DL IHN+ILL*E VTKSTRNSKYTTNAPCSCPH+KTS
Sbjct: 513 DHIPKSIACKDEKLQGLINDFLPDLWIHNYILL*ELVTKSTRNSKYTTNAPCSCPHNKTS 692
Query: 599 SIFNTLPLISLIRLVIL*NSNSISFP 676
S FNTLPLI LIRLVI N SIS P
Sbjct: 693 SFFNTLPLICLIRLVIFRNRYSISCP 770
Score = 175 bits (376), Expect = 5e-043
Identities = 82/132 (62%), Positives = 86/132 (65%)
Frame = +1 / +2
Query: 280 LAHARSARRRKLCCHCSPSCTPLARASLQPLLGPEWI*SSRQLPR*RPHPTAHHLQG*ET 459
L H RSA+RR+LCCHCSP+C P ARAS Q LG S RQ PR*RPHP H LQG*ET
Sbjct: 374 LDHGRSAQRRRLCCHCSPACRPPARASSQLPLGLVSTGSCRQPPR*RPHPKVHRLQG*ET 553
Query: 460 RVCHQQPPLGSPDPQPHIALRVCXXXXXXXXXXXXRAMFLPTSQNLQHLQYAAAHQFDQA 639
HQ+ P GS DPQ HIALR C RAMFLPT QNLQ LQY AAH DQA
Sbjct: 554 PGTHQRFPPGSLDPQLHIALRACHQKHEKQQVHHQRAMFLPT*QNLQLLQYVAAHLSDQA 733
Query: 640 CDPLKQQ*HFLP 675
CD KQ HFLP
Sbjct: 734 CDLSKQVQHFLP 769
Score = 169 bits (364), Expect = 2e-041
Identities = 84/140 (60%), Positives = 100/140 (71%)
Frame = -1 / -2
Query: 675 GKEMLLLFQRITSLIKLMSGSVLKMLEVL*CGQEHGAXXXXXXXXXXXVTNS*SNMWLWI 496
G+EML LF++ITSLI+ MSG+VLK LEVL CGQEHGA VT+S*SNM LWI
Sbjct: 769 GQEMLYLFRKITSLIRQMSGNVLKKLEVLLCGQEHGALVVYLLFLVLLVTSS*SNM*LWI 590
Query: 495 RRSERRLLMTHSSFLSLQVMGCGMWSLTRKLSR*LDPFRTQKRLQRCSCKRRTRGRAVTT 316
+RS R+ LM+ SF SLQ M GMWSLTR+LS * ++TQ++L+R SC+R T GRAVTT
Sbjct: 589 QRSGRKSLMSPWSFSSLQAMDFGMWSLTRRLST*PGRYKTQRKLRRGSCRRPTSGRAVTT 410
Query: 315 *LASSCTSCMGKVAADTLKA 256
* AS C S M K A LKA
Sbjct: 409 *PASLCASSMVKGVAGPLKA 350
Score = 107 bits (229), Expect(2) = 3e-036
Identities = 45/72 (62%), Positives = 52/72 (72%)
Frame = -2 / -3
Query: 527 QTLKAICGCGSGDPRGGC**HTRVSYPCK*WAVGCGL*RGSCRDD*IHSGPRRGCKDALA 348
Q LKAIC CGS DP G ** VS+PCK W +GCGL*RG CR D + + PR C++ALA
Sbjct: 621 QALKAICSCGSRDPGGNR**VPGVSHPCKRWTLGCGL*RGGCRHDPVDTRPRGSCEEALA 442
Query: 347 RGVQEGEQ*QHN 312
G+Q GEQ*QHN
Sbjct: 441 GGLQAGEQ*QHN 406
Score = 64.8 bits (135), Expect(2) = 3e-036
Identities = 28/37 (75%), Positives = 30/37 (81%)
Frame = -2 / -3
Query: 674 GRKCYCCFKGSQA*SN**AAAY*RCWRFCDVGRNMAR 564
GRKC CF+ SQA*S+ *AA Y*R WRFC VGRNMAR
Sbjct: 768 GRKCCTCFERSQA*SDR*AATY*RSWRFCYVGRNMAR 658
>gb|BM816972.1|BM816972 HB107D11_SK.ab1 HB Hordeum vulgare subsp. vulgare cDNA clone
HB107D11_SK.ab1 similar to (AC022314) F9C16.6
[Arabidopsis thaliana], mRNA sequence
Length = 870
Score = 204 bits (440), Expect(3) = 7e-079
Identities = 84/92 (91%), Positives = 89/92 (96%)
Frame = -3 / +3
Query: 757 GSTASTAVLVGDRLFVANVGDSRAIICREGNAIAVSKDHKPDQTDERQRIEDAGGFVMWA 578
GSTASTA+LVGDRL VANVGDSRA+ICR G+AIAVS+DHKPDQTDERQRIEDAGGFVMWA
Sbjct: 393 GSTASTAILVGDRLVVANVGDSRAVICRGGDAIAVSRDHKPDQTDERQRIEDAGGFVMWA 572
Query: 577 GTWRVGGVLAVSRAFGDKLLKQYVVVDPEIRE 482
GTWRVGGVLAVSRAFGDKLLKQYVV DPEI+E
Sbjct: 573 GTWRVGGVLAVSRAFGDKLLKQYVVADPEIKE 668
Score = 177 bits (382), Expect(2) = 1e-050
Identities = 68/113 (60%), Positives = 92/113 (81%)
Frame = -3 / +3
Query: 1066 VSGGGLSQNGRFSYGYASSPGKRASMEDFYETKIDCVDGQIVGLFGVFDGHGGAKVAEYV 887
VSGGG S+NG+FSYGYAS GKR+SMEDF+ET+ID VDG+ VGLFGVFDGHGGA+ AE+V
Sbjct: 81 VSGGGFSENGKFSYGYASCLGKRSSMEDFHETRIDGVDGETVGLFGVFDGHGGARAAEFV 260
Query: 886 KENLFNNLVSHPKFISDTKVAIDDAYKSTDSEFLESDSSQNQCGSTASTAVLV 728
K+NLF+NL+ HPKF +DTK AI + + TDSE L++D++ N+ + ++ ++
Sbjct: 261 KQNLFSNLIKHPKFFTDTKSAIAETFTHTDSELLKADTAHNRDAGSTASTAIL 419
Score = 150 bits (322), Expect(3) = 1e-060
Identities = 65/83 (78%), Positives = 69/83 (83%)
Frame = +3 / -3
Query: 510 YCFKSLSPKARETASTPPTRHVPAHITKPPASSIRCRSSV*SGL*SFETAIAFPSLHMIA 689
YCF SLSP ARETASTPPTRHVPAH+TKPPASSI C SSV SGL S +TA+A P L M A
Sbjct: 640 YCFNSLSPNARETASTPPTRHVPAHMTKPPASSILCLSSVWSGLWSLDTAMASPPLQMTA 461
Query: 690 LESPTFATKRRSPTSTAVDAVDP 758
LESPTFAT RRSPT AV+AVDP
Sbjct: 460 LESPTFATTRRSPTRMAVEAVDP 392
Score = 95.0 bits (201), Expect(3) = 2e-028
Identities = 38/84 (45%), Positives = 53/84 (63%)
Frame = +2 / -2
Query: 482 LSDLRIHNHILL*EFVTKSTRNSKYTTNAPCSCPHHKTSSIFNTLPLISLIRLVIL*NSN 661
L DL I NH+LL +FVTK +RN K+ PC+CPH + S I LPL+ L+RL++ *+
Sbjct: 668 LLDLWIGNHVLLQQFVTKRSRNGKHAAYTPCTCPHDEASGILYPLPLVCLVRLMVP*HRY 489
Query: 662 SISFPAYDSPRVTNICDEETITNK 733
I+ D P + N+C + ITNK
Sbjct: 488 GITTSTNDGPGIPNVCHHQAITNK 417
Score = 82.6 bits (174), Expect(3) = 7e-079
Identities = 37/56 (66%), Positives = 43/56 (76%)
Frame = -3 / +1
Query: 487 REEVVDDTLEFLILASDGLWDVVSNEEAVAMTRSIQDPEEAAKMLLQEAYKRESSD 320
R EVVD +LEFLILASDGLWDVV+NEEAVAM + I D ++AAK LL A S+D
Sbjct: 664 RREVVDSSLEFLILASDGLWDVVTNEEAVAMVKPIVDSQQAAKKLLVAATXEGSAD 831
Score = 72.5 bits (152), Expect(3) = 1e-060
Identities = 34/81 (41%), Positives = 51/81 (62%)
Frame = +2 / -2
Query: 824 SDFSITDELWMTNKIVEQVFFNILCYLSTTMTIKNSKKTNYLAINTINFCLIEVFHGCPF 1003
S I +ELW+ + + E+V + L S+TM ++N+++ + L+I+ I+ CL+EV HG F
Sbjct: 323 SRLGIGEELWVLD*VAEKVLLDELRRSSSTMAVENTEQPDGLSIDAIDSCLVEVLHGRSF 144
Query: 1004 TRGACIAIAKSTILAEAAAAD 1066
A I IAK TIL E AA D
Sbjct: 143 P*AARITIAKLTILTEPAATD 81
Score = 50.1 bits (103), Expect(3) = 1e-060
Identities = 25/47 (53%), Positives = 31/47 (65%)
Frame = +3 / -2
Query: 318 LSLLSLLYASCKSIFAASSGS*MDLVIATASSLETTSHSPSLARIRN 458
+S L A+ +S AA S + +ATASSL TTSHSPSLAR+RN
Sbjct: 833 VSALPSXVAATRSFLAACCESTIGFTMATASSLVTTSHSPSLARMRN 693
Score = 46.9 bits (96), Expect(3) = 7e-079
Identities = 30/77 (38%), Positives = 36/77 (46%)
Frame = -1 / +1
Query: 1065 SAAAASARMVDLAMAMQAPLVKGHPWKTSMRQKLIVLMARXXXXXXXXXXXXXLR*QSML 886
S AA S RMV LAM M+A K PW+TS RQ+ + M R L +S
Sbjct: 82 SVAAGSVRMVSLAMVMRAA*GKDLPWRTSTRQESMASMERPSGCSVFSTAMVELERRSSS 261
Query: 885 KKTCSTILLVIQSSSVI 835
+T S QSSS I
Sbjct: 262 SRTFSAT*SSTQSSSPI 312
Score = 42.8 bits (87), Expect(3) = 2e-028
Identities = 24/50 (48%), Positives = 27/50 (54%)
Frame = +3 / -3
Query: 846 NFG*LTRLLNRFSLTYSATLAXXXXXXXXXXXXIWPSTQSIFVS*KSSMD 995
NFG L +LL RF LT SA A + PST SI VS KSSM+
Sbjct: 301 NFGCLIKLLKRFCLTNSAARAPPWPSKTPNSPTVSPSTPSILVSWKSSME 152
Score = 42.8 bits (87), Expect(2) = 1e-050
Identities = 34/97 (35%), Positives = 43/97 (44%)
Frame = -1 / +1
Query: 735 YLLVIVSSSQMLVTLGLSYAGKEMLLLFQRITSLIKLMSGSVLKMLEVL*CGQEHGAXXX 556
+LLVI Q L G S+ M Q SL + G +M E CGQ HG
Sbjct: 415 FLLVIAWWWQTLGIPGPSFVEVVMP*RCQGTISLTRQTRGRG*RMPEASSCGQVHGV*AA 594
Query: 555 XXXXXXXXVTNS*SNMWLWIRRSERRLLMTHSSFLSL 445
VTN *S+ WL I+RS R ++ + FL L
Sbjct: 595 CLPFLERLVTNC*SSTWLPIQRSRREVVDSSLEFLIL 705
Score = 26.3 bits (51), Expect(3) = 2e-028
Identities = 13/44 (29%), Positives = 24/44 (54%)
Frame = +2 / -1
Query: 350 QEHLCSLFWVLNGSSHRDSFLVRDHIPQPITCKDKKLECVINNL 481
+E L L V + H FLV +PQ + +D++L+ +++L
Sbjct: 801 EELLGRLLRVHDRLHHGHRFLVGHDVPQSVARQDEELQRAVDHL 670
>gb|AL507001.1|AL507001 AL507001 Hordeum vulgare Barke developing caryopsis (3.-15.DAP)
Hordeum vulgare subsp. vulgare cDNA clone HY04N23T 5',
mRNA sequence
Length = 560
Score = 289 bits (626), Expect = 2e-077
Identities = 120/141 (85%), Positives = 131/141 (92%)
Frame = -3 / +2
Query: 1072 SSVSGGGLSQNGRFSYGYASSPGKRASMEDFYETKIDCVDGQIVGLFGVFDGHGGAKVAE 893
S VSGGGLSQN +FSYGYASS GKRASMEDFYET+I+ VDGQ++GLFGVFDGHGGAKVA
Sbjct: 137 SPVSGGGLSQNSKFSYGYASSLGKRASMEDFYETRIESVDGQLIGLFGVFDGHGGAKVAX 316
Query: 892 YVKENLFNNLVSHPKFISDTKVAIDDAYKSTDSEFLESDSSQNQCGSTASTAVLVGDRLF 713
YVK NLF++L+ HPKF+SDTKVAIDD YKSTDSEFLESDS+QNQCGSTASTAVLVGDRLF
Sbjct: 317 YVKHNLFSHLLRHPKFMSDTKVAIDDXYKSTDSEFLESDSTQNQCGSTASTAVLVGDRLF 496
Query: 712 VANVGDSRAIICREGNAIAVS 650
VANVGDSRAIICR GNA+ VS
Sbjct: 497 VANVGDSRAIICRAGNAVPVS 559
Score = 232 bits (500), Expect = 4e-060
Identities = 101/139 (72%), Positives = 111/139 (79%)
Frame = +2 / -2
Query: 653 NSNSISFPAYDSPRVTNICDEETITNKYSS*CS*PTLILTTVRF*EFTVGAFISIIYSDF 832
N SIS PAYDSP V+NICD+ETITNKYSS*C *PTL+L+TVRF E TVG FI IIYS F
Sbjct: 556 NRYSISCPAYDSPGVSNICDKETITNKYSS*CG*PTLVLSTVRFQELTVGTFIXIIYSHF 377
Query: 833 SITDELWMTNKIVEQVFFNILCYLSTTMTIKNSKKTNYLAINTINFCLIEVFHGCPFTRG 1012
+T ELWM K+ E+V F+ILCY S TMTIKNSK TN L I+T N CLI+VFHG PFT G
Sbjct: 376 CVTHELWMPKKMAEEVVFHILCYFSXTMTIKNSK*TNKLPIDTFNSCLIKVFHGSPFTEG 197
Query: 1013 ACIAIAKSTILAEAAAADG 1069
A I IAK TILAEAAAADG
Sbjct: 196 ARITIAKLTILAEAAAADG 140
Score = 166 bits (356), Expect = 3e-040
Identities = 89/142 (62%), Positives = 99/142 (69%)
Frame = -1 / +3
Query: 1074 DPPSAAAASARMVDLAMAMQAPLVKGHPWKTSMRQKLIVLMARXXXXXXXXXXXXXLR*Q 895
D PSAAAASAR+V LAM M+AP VKG PWKT MRQ+L V M L+*
Sbjct: 135 DRPSAAAASARIVSLAMVMRAPSVKGLPWKTFMRQELKVSMGSLLVYLEFLMVMVXLK*X 314
Query: 894 SMLKKTCSTILLVIQSSSVILKSL*MMLIKAPTVNS*NLTVVKINVGQLHQLLYLLVIVS 715
SM T S I L IQSS V K L*M+ IK PTV+S NLTV+K +VGQ HQLLYLLVIVS
Sbjct: 315 SM*NTTSSAIFLGIQSS*VTQKWL*MIXIKVPTVSSWNLTVLKTSVGQPHQLLYLLVIVS 494
Query: 714 SSQMLVTLGLSYAGKEMLLLFQ 649
SQML T GLSYAG+EML LF+
Sbjct: 495 LSQMLETPGLSYAGQEMLYLFR 560
Score = 132 bits (283), Expect(2) = 2e-047
Identities = 59/85 (69%), Positives = 67/85 (78%)
Frame = -2 / +1
Query: 905 *GSRVC*RKPVQQSC*SSKVHQ*Y*SRYR*CL*KHRQ*ILRI*Q*SKSMWVNCINCCTCW 726
* S VC +P+Q S *+SKVH+*+ S YR* L*K+RQ*+L I*Q SK +WVN INCCTCW
Sbjct: 304 *SSXVCETQPLQPSS*ASKVHE*HKSGYR*XL*KYRQ*VLGI*QYSKPVWVNRINCCTCW 483
Query: 725 *SSLRRKCW*L*GYHMQGRKCYCCF 651
*SSL RKCW L GYHMQGRKC CF
Sbjct: 484 *SSLCRKCWRLQGYHMQGRKCCTCF 558
Score = 120 bits (257), Expect(3) = 1e-037
Identities = 57/86 (66%), Positives = 59/86 (68%)
Frame = +3 / -3
Query: 651 ETAIAFPSLHMIALESPTFATKRRSPTSTAVDAVDPH*F*LLSDSKNXXXXXXXXXXXXX 830
ET AFP+LHMIALESPTFATKRRSPTSTAVDAVDPH F*+LSDSKN
Sbjct: 558 ETGTAFPALHMIALESPTFATKRRSPTSTAVDAVDPHWF*VLSDSKNSLSVLL*XSSIAT 379
Query: 831 XXXXMNFG*LTRLLNRFSLTYSATLA 908
MNFG L R L R TY ATLA
Sbjct: 378 FVSLMNFGCLRRWLKRLCFTYXATLA 301
Score = 117 bits (251), Expect(2) = 2e-028
Identities = 54/76 (71%), Positives = 59/76 (77%)
Frame = +1 / -1
Query: 652 KQQ*HFLPCI**P*SHQHLRRRDDHQQVQQLMQLTHIDFDYCQILRIHCRCFYKHHL*RL 831
KQ HFLPCI**P S QHLR+RDDHQQVQQLM+LTH F+YCQI R HCR FY +HL* L
Sbjct: 557 KQVQHFLPCI**PWSLQHLRQRDDHQQVQQLMRLTHTGFEYCQIPRTHCRYFYXNHL*PL 378
Query: 832 *YH**TLDD*QDC*TG 879
H *TLD *+D * G
Sbjct: 377 LCHS*TLDA*EDG*RG 330
Score = 77.1 bits (162), Expect(2) = 2e-047
Identities = 33/41 (80%), Positives = 35/41 (85%)
Frame = -2 / +1
Query: 1073 ILRQRRRPQPEW*I*LWLCKLPW*KGIHGRLL*DKN*LC*W 951
I RQRRRPQPE *+*LWLC+LP *KG HGRLL*DKN* C W
Sbjct: 136 IARQRRRPQPE**V*LWLCELPR*KGFHGRLL*DKN*KCRW 258
Score = 44.1 bits (90), Expect(3) = 1e-037
Identities = 14/21 (66%), Positives = 18/21 (85%)
Frame = +1 / -1
Query: 946 SGHQHNQFLSHRSLPWMPFYQ 1008
+ H+H QFLSH+SLPW PFY+
Sbjct: 263 AAHRHFQFLSHKSLPWKPFYR 201
Score = 30.4 bits (60), Expect(3) = 1e-037
Identities = 10/11 (90%), Positives = 10/11 (90%)
Frame = +3 / -3
Query: 1041 FWLRPPPLTED 1073
FWLRPPPLT D
Sbjct: 168 FWLRPPPLTGD 136
Score = 28.1 bits (55), Expect(2) = 2e-028
Identities = 13/16 (81%), Positives = 14/16 (87%)
Frame = +3 / -3
Query: 951 PSTQSIFVS*KSSMDA 998
PST SI VS*KSSM+A
Sbjct: 258 PSTLSILVS*KSSMEA 211
>gb|CB881044.1|CB881044 HM08J17w HM Hordeum vulgare subsp. vulgare cDNA clone HM08J17
3-PRIME, mRNA sequence
Length = 619
Score = 289 bits (626), Expect = 2e-077
Identities = 124/143 (86%), Positives = 130/143 (90%)
Frame = -3 / -3
Query: 649 KDHKPDQTDERQRIEDAGGFVMWAGTWRVGGVLAVSRAFGDKLLKQYVVVDPEIREEVVD 470
KDHKPDQTDERQRIE+AGGFVMWAGTWRVGGVLAVSRAFGDKLLKQYVVVDPEIREE+VD
Sbjct: 617 KDHKPDQTDERQRIEEAGGFVMWAGTWRVGGVLAVSRAFGDKLLKQYVVVDPEIREEIVD 438
Query: 469 DTLEFLILASDGLWDVVSNEEAVAMTRSIQDPEEAAKMLLQEAYKRESSDNITCVVVHFL 290
++LEFLILASDGLWDVVSNEEAV MTRSIQDPEEAAK LLQEAYKRESSDNITCVVV F
Sbjct: 437 ESLEFLILASDGLWDVVSNEEAVDMTRSIQDPEEAAKRLLQEAYKRESSDNITCVVVRFF 258
Query: 289 HGQGSSGYA*SVAVKLFYAVVCS 221
HGQGSSG A*S L + C+
Sbjct: 257 HGQGSSGPA*SRCEALLTSGRCT 189
Score = 214 bits (462), Expect = 6e-055
Identities = 100/131 (76%), Positives = 104/131 (79%)
Frame = +3 / +1
Query: 258 L*AYPLLPCPCKKCTTTQVMLSLLSLLYASCKSIFAASSGS*MDLVIATASSLETTSHSP 437
L*A PLLP P KK TTTQVMLSLLS L ASCKS+FAASSGS MD V++TASSLETTS SP
Sbjct: 226 L*AGPLLP*PWKKRTTTQVMLSLLSRL*ASCKSLFAASSGSCMDRVMSTASSLETTSQSP 405
Query: 438 SLARIRNXXXXXXXXXXXXXXXXXYCFKSLSPKARETASTPPTRHVPAHITKPPASSIRC 617
SLAR+RN YCF SLSPKARETASTPPTRHVPAHITKPPASSIRC
Sbjct: 406 SLARMRNSRDSSTISSRISGSTTTYCFNSLSPKARETASTPPTRHVPAHITKPPASSIRC 585
Query: 618 RSSV*SGL*SF 650
RSSV*SGL*SF
Sbjct: 586 RSSV*SGL*SF 618
Score = 213 bits (459), Expect = 2e-054
Identities = 94/130 (72%), Positives = 103/130 (79%)
Frame = +2 / +3
Query: 257 ALSVSAATLPMQEVHDDASYVVTALPLVRLLQEHLCSLFWVLNGSSHRDSFLVRDHIPQP 436
ALS A L M+E H+DA YVVTALPLV LLQE L S WVL G H DS LVRDHIP+
Sbjct: 225 ALSRPATPLTMEEAHNDAGYVVTALPLVGLLQEPLRSFLWVLYGPGHVDSLLVRDHIPKS 404
Query: 437 ITCKDKKLECVINNLLSDLRIHNHILL*EFVTKSTRNSKYTTNAPCSCPHHKTSSIFNTL 616
I CKD+KL+ +IN+ L DL IHN+ILL* VTKSTRNSKYTTNAPCSCPH+KTSS FNTL
Sbjct: 405 IACKDEKLQGLINDFLPDLWIHNYILL**LVTKSTRNSKYTTNAPCSCPHNKTSSFFNTL 584
Query: 617 PLISLIRLVI 646
PLI LIRLVI
Sbjct: 585 PLICLIRLVI 614
Score = 166 bits (358), Expect = 1e-040
Identities = 76/122 (62%), Positives = 80/122 (65%)
Frame = +1 / +2
Query: 280 LAHARSARRRKLCCHCSPSCTPLARASLQPLLGPEWI*SSRQLPR*RPHPTAHHLQG*ET 459
L H RSA+RR+LCCHCSP+C P ARAS Q LG W S RQ PR*RPHP H LQG*ET
Sbjct: 248 LDHGRSAQRRRLCCHCSPACRPPARASSQLPLGLVWTGSCRQPPR*RPHPKVHRLQG*ET 427
Query: 460 RVCHQQPPLGSPDPQPHIALRVCXXXXXXXXXXXXRAMFLPTSQNLQHLQYAAAHQFDQA 639
HQ+ P GS DPQ HIAL C RAMFLPT QNLQ LQY AAH DQA
Sbjct: 428 PGTHQRFPPGSLDPQLHIALIACHQKHEKQQVHHQRAMFLPT*QNLQLLQYVAAHLSDQA 607
Query: 640 CD 645
CD
Sbjct: 608 CD 613
Score = 157 bits (337), Expect = 1e-037
Identities = 78/132 (59%), Positives = 93/132 (70%)
Frame = -1 / -1
Query: 651 QRITSLIKLMSGSVLKMLEVL*CGQEHGAXXXXXXXXXXXVTNS*SNMWLWIRRSERRLL 472
++ITSLI+ MSG+VLK LEVL CGQEHGA VT+ *SNM LWI+RS R+ L
Sbjct: 619 RKITSLIRQMSGNVLKKLEVLLCGQEHGALVVYLLFLVLLVTSY*SNM*LWIQRSGRKSL 440
Query: 471 MTHSSFLSLQVMGCGMWSLTRKLSR*LDPFRTQKRLQRCSCKRRTRGRAVTT*LASSCTS 292
M+ SF SLQ M GMWSLTR+LS * P++TQ++L+R SC+R T GRAVTT* AS C S
Sbjct: 439 MSPWSFSSLQAMDFGMWSLTRRLST*PGPYKTQRKLRRGSCRRPTSGRAVTT*PASLCAS 260
Query: 291 CMGKVAADTLKA 256
M K A LKA
Sbjct: 259 SMVKGVAGLLKA 224
Score = 111 bits (236), Expect(2) = 3e-032
Identities = 45/72 (62%), Positives = 53/72 (73%)
Frame = -2 / -2
Query: 527 QTLKAICGCGSGDPRGGC**HTRVSYPCK*WAVGCGL*RGSCRDD*IHSGPRRGCKDALA 348
Q +KAIC CGS DP G ** VS+PCK W +GCGL*RG CR D +H+ PR C++ALA
Sbjct: 495 QAIKAICSCGSRDPGGNR**VPGVSHPCKRWTLGCGL*RGGCRHDPVHTRPRGSCEEALA 316
Query: 347 RGVQEGEQ*QHN 312
G+Q GEQ*QHN
Sbjct: 315 GGLQAGEQ*QHN 280
Score = 48.3 bits (99), Expect(2) = 3e-032
Identities = 22/27 (81%), Positives = 23/27 (85%)
Frame = -2 / -2
Query: 644 SQA*SN**AAAY*RCWRFCDVGRNMAR 564
SQA*S+ *AA Y*R WRFC VGRNMAR
Sbjct: 612 SQA*SDR*AATY*RSWRFCYVGRNMAR 532
>gb|BE601667.3|BE601667 HVSMEh0099C03f Hordeum vulgare 5-45 DAP spike EST library
HVcDNA0009 (5 to 45 DAP) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEh0099C03f, mRNA sequence
Length = 502
Score = 282 bits (610), Expect = 2e-075
Identities = 119/143 (83%), Positives = 131/143 (91%)
Frame = -3 / +1
Query: 742 TAVLVGDRLFVANVGDSRAIICREGNAIAVSKDHKPDQTDERQRIEDAGGFVMWAGTWRV 563
TA+LVGDRL VANVGDSRA+ICR G+AIAVS+DHKPDQTDERQRIEDAGGFVMWAGTWRV
Sbjct: 1 TAILVGDRLVVANVGDSRAVICRGGDAIAVSRDHKPDQTDERQRIEDAGGFVMWAGTWRV 180
Query: 562 GGVLAVSRAFGDKLLKQYVVVDPEIREEVVDDTLEFLILASDGLWDVVSNEEAVAMTRSI 383
GGVLAVSRAFGDKLLKQYVV DPEI+EEVVD +LEFLILASDGLWDVV+NEEAVAM + I
Sbjct: 181 GGVLAVSRAFGDKLLKQYVVADPEIKEEVVDSSLEFLILASDGLWDVVTNEEAVAMVKPI 360
Query: 382 QDPEEAAKMLLQEAYKRESSDNI 314
D ++AAK LL EA +R S+DNI
Sbjct: 361 VDSQQAAKKLLVEATRRGSADNI 429
Score = 192 bits (413), Expect = 4e-048
Identities = 90/144 (62%), Positives = 98/144 (68%)
Frame = +3 / -3
Query: 309 QVMLSLLSLLYASCKSIFAASSGS*MDLVIATASSLETTSHSPSLARIRNXXXXXXXXXX 488
++MLS L L AS +S AA S + +ATASSL TTSHSPSLAR+RN
Sbjct: 434 RLMLSALPLRVASTRSFLAACCESTIGFTMATASSLVTTSHSPSLARMRNSRELSTTSSL 255
Query: 489 XXXXXXXYCFKSLSPKARETASTPPTRHVPAHITKPPASSIRCRSSV*SGL*SFETAIAF 668
YCF SLSP ARETASTPPTRHVPAH+TKPPASSI C SSV SGL S +TAIA
Sbjct: 254 ISGSATTYCFNSLSPNARETASTPPTRHVPAHMTKPPASSILCLSSVWSGLWSLDTAIAS 75
Query: 669 PSLHMIALESPTFATKRRSPTSTA 740
P L M ALESPTFAT RRSPT A
Sbjct: 74 PPLQMTALESPTFATTRRSPTRMA 3
Score = 126 bits (270), Expect = 2e-028
Identities = 58/139 (41%), Positives = 84/139 (60%)
Frame = +2 / -2
Query: 317 VVTALPLVRLLQEHLCSLFWVLNGSSHRDSFLVRDHIPQPITCKDKKLECVINNLLSDLR 496
VV A P RL +E L L V + H FLV +PQ + +D++L+ +++LL DL
Sbjct: 426 VVGASPPGRLDEELLGRLLRVHDRLHHGHRFLVGHDVPQSVARQDEELQRAVDHLLLDLW 247
Query: 497 IHNHILL*EFVTKSTRNSKYTTNAPCSCPHHKTSSIFNTLPLISLIRLVIL*NSNSISFP 676
I NH+LL +FVTK +RN K+ PC+CPH + S I LPL+ L+RL++ *+ SI+
Sbjct: 246 IGNHVLLQQFVTKRSRNGKHAAYTPCTCPHDEASGILYPLPLVCLVRLMVP*HRYSITTS 67
Query: 677 AYDSPRVTNICDEETITNK 733
D P + N+C + ITNK
Sbjct: 66 TNDGPGIPNVCHHQAITNK 10
>gb|BM369604.2|BM369604 EBem07_SQ004_B17_R embryo, 28 DPA, no treatment, cv Optic, EBem07
Hordeum vulgare subsp. vulgare cDNA clone
EBem07_SQ004_B17 5', mRNA sequence
Length = 404
Score = 259 bits (561), Expect = 1e-068
Identities = 108/119 (90%), Positives = 115/119 (96%)
Frame = -3 / +3
Query: 757 GSTASTAVLVGDRLFVANVGDSRAIICREGNAIAVSKDHKPDQTDERQRIEDAGGFVMWA 578
GSTASTA+LVGDRL VANVGDSRA+ICR G+AIAVS+DHKPDQTDERQRIEDAGGFVMWA
Sbjct: 48 GSTASTAILVGDRLVVANVGDSRAVICRGGDAIAVSRDHKPDQTDERQRIEDAGGFVMWA 227
Query: 577 GTWRVGGVLAVSRAFGDKLLKQYVVVDPEIREEVVDDTLEFLILASDGLWDVVSNEEAV 401
GTWRVGGVLAVSRAFGDKLLKQYVV DPEI+EEVVD +LEFLILASDGLWDVV+NEEAV
Sbjct: 228 GTWRVGGVLAVSRAFGDKLLKQYVVADPEIKEEVVDSSLEFLILASDGLWDVVTNEEAV 404
Score = 186 bits (400), Expect = 2e-046
Identities = 83/119 (69%), Positives = 87/119 (73%)
Frame = +3 / -2
Query: 402 TASSLETTSHSPSLARIRNXXXXXXXXXXXXXXXXXYCFKSLSPKARETASTPPTRHVPA 581
TASSL TTSHSPSLAR+RN YCF SLSP ARETASTPPTRHVPA
Sbjct: 403 TASSLVTTSHSPSLARMRNSRELSTTSSLISGSATTYCFNSLSPNARETASTPPTRHVPA 224
Query: 582 HITKPPASSIRCRSSV*SGL*SFETAIAFPSLHMIALESPTFATKRRSPTSTAVDAVDP 758
H+TKPPASSI C SSV SGL S +TAIA P L M ALESPTFAT RRSPT AV+AVDP
Sbjct: 223 HMTKPPASSILCLSSVWSGLWSLDTAIASPPLQMTALESPTFATTRRSPTRMAVEAVDP 47
Score = 117 bits (250), Expect = 1e-025
Identities = 47/109 (43%), Positives = 71/109 (65%)
Frame = +2 / -1
Query: 407 FLVRDHIPQPITCKDKKLECVINNLLSDLRIHNHILL*EFVTKSTRNSKYTTNAPCSCPH 586
FLV +PQ + +D++L+ +++LL DL I NH+LL +FVTK +RN K+ PC+CPH
Sbjct: 398 FLVGHDVPQSVARQDEELQRAVDHLLLDLWIGNHVLLQQFVTKRSRNGKHAAYTPCTCPH 219
Query: 587 HKTSSIFNTLPLISLIRLVIL*NSNSISFPAYDSPRVTNICDEETITNK 733
+ S I LPL+ L+RL++ *+ SI+ D P + N+C + ITNK
Sbjct: 218 DEASGILYPLPLVCLVRLMVP*HRYSITTSTNDGPGIPNVCHHQAITNK 72
>gb|BQ465558.1|BQ465558 HU04A05r HU Hordeum vulgare subsp. vulgare cDNA clone HU04A05
5-PRIME, mRNA sequence
Length = 660
Score = 235 bits (508), Expect(2) = 1e-066
Identities = 98/118 (83%), Positives = 106/118 (89%)
Frame = -3 / +3
Query: 775 SSQNQCGSTASTAVLVGDRLFVANVGDSRAIICREGNAIAVSKDHKPDQTDERQRIEDAG 596
S GSTASTA+LVG RL VANVGDSRA++ + G AIAVS+DHKPDQTDERQRIE+AG
Sbjct: 306 SHTRDAGSTASTAILVGGRLVVANVGDSRAVVSKGGKAIAVSRDHKPDQTDERQRIEEAG 485
Query: 595 GFVMWAGTWRVGGVLAVSRAFGDKLLKQYVVVDPEIREEVVDDTLEFLILASDGLWDV 422
GFVMWAGTWRVGGVLAVSRAFGDKLLKQYVV DPEI+EEVVD +LEFLILASDGLWDV
Sbjct: 486 GFVMWAGTWRVGGVLAVSRAFGDKLLKQYVVADPEIKEEVVDSSLEFLILASDGLWDV 659
Score = 180 bits (387), Expect(2) = 1e-045
Identities = 68/112 (60%), Positives = 92/112 (82%)
Frame = -3 / +3
Query: 1063 SGGGLSQNGRFSYGYASSPGKRASMEDFYETKIDCVDGQIVGLFGVFDGHGGAKVAEYVK 884
+GGG+S+ GRFSYG+AS GKRASMEDFYET++D VDG+ VGLFGVFDGHGGA+ AEYVK
Sbjct: 15 TGGGISEKGRFSYGFASCAGKRASMEDFYETRVDDVDGETVGLFGVFDGHGGARAAEYVK 194
Query: 883 ENLFNNLVSHPKFISDTKVAIDDAYKSTDSEFLESDSSQNQCGSTASTAVLV 728
++LF+NL+ HPKF++DTK AI + + TDSEFL++DSS + + ++ ++
Sbjct: 195 KHLFSNLIKHPKFMTDTKAAIAETFNHTDSEFLKADSSHTRDAGSTASTAIL 350
Score = 178 bits (383), Expect(2) = 1e-058
Identities = 78/112 (69%), Positives = 82/112 (73%)
Frame = +3 / -3
Query: 423 TSHSPSLARIRNXXXXXXXXXXXXXXXXXYCFKSLSPKARETASTPPTRHVPAHITKPPA 602
TSHSPSLAR+RN YCFKSLSPKARETA TPPTRHVPAHITKPPA
Sbjct: 658 TSHSPSLARMRNSSELSTTSSLISGSATTYCFKSLSPKARETARTPPTRHVPAHITKPPA 479
Query: 603 SSIRCRSSV*SGL*SFETAIAFPSLHMIALESPTFATKRRSPTSTAVDAVDP 758
SSI C SSV SGL*S ETAIAFP L ALESPTFAT +R PT AV+AV+P
Sbjct: 478 SSILCLSSVWSGL*SLETAIAFPPLETTALESPTFATTKRPPTRIAVEAVEP 323
Score = 128 bits (274), Expect(3) = 3e-035
Identities = 56/114 (49%), Positives = 80/114 (70%)
Frame = +2 / -2
Query: 422 HIPQPITCKDKKLECVINNLLSDLRIHNHILL*EFVTKSTRNSKYTTNAPCSCPHHKTSS 601
+IPQP+T +D++ E +++LL DL + +ILL*+F+TK +RNSK TTN PC PHHK SS
Sbjct: 659 NIPQPVTSEDEEFE*AVDHLLLDLWVSYNILL*KFITKGSRNSKNTTNTPCPSPHHKASS 480
Query: 602 IFNTLPLISLIRLVIL*NSNSISFPAYDSPRVTNICDEETITNKYSS*CS*PTL 763
N+L L+ L+R VI N NS+ +S R+TNIC+ +T T+K S * S* ++
Sbjct: 479 FLNSLSLVCLVRFVIPGNRNSLPSFRNNSSRITNICNHQTTTDKNSC*GS*ASI 318
Score = 68.9 bits (144), Expect(2) = 1e-058
Identities = 33/98 (33%), Positives = 51/98 (52%)
Frame = +2 / -2
Query: 767 LTTVRF*EFTVGAFISIIYSDFSITDELWMTNKIVEQVFFNILCYLSTTMTIKNSKKTNY 946
+ T+ F + +G S I E M + I E+V +I S+T+TIK +K+ N
Sbjct: 311 VATISFQKL*IGMIECFSNSSLCICHEFRMLD*IAEKVLLHIFSCSSSTVTIKYAKQPNS 132
Query: 947 LAINTINFCLIEVFHGCPFTRGACIAIAKSTILAEAAA 1060
L+IN I+ CL+E+ H CPF AC I + + A+
Sbjct: 131 LSINIIHSCLVEILH*CPFPSTACEPITEPAFFTDPAS 18
Score = 40.9 bits (83), Expect(2) = 1e-066
Identities = 20/39 (51%), Positives = 25/39 (64%)
Frame = -2 / +2
Query: 1061 RRRPQPEW*I*LWLCKLPW*KGIHGRLL*DKN*LC*WPD 945
RRR Q + + LW+ KL W KGI+G L DK+ C*W D
Sbjct: 17 RRRDQ*KRQVQLWVRKLCWEKGINGGFLRDKSG*C*WRD 133
Score = 29.5 bits (58), Expect(3) = 3e-035
Identities = 11/19 (57%), Positives = 13/19 (68%)
Frame = +1 / -1
Query: 952 HQHNQFLSHRSLPWMPFYQ 1008
HQH+ LS R+ P MPF Q
Sbjct: 126 HQHHPLLSRRNPPLMPFSQ 70
Score = 29.5 bits (58), Expect(3) = 3e-035
Identities = 17/46 (36%), Positives = 19/46 (41%)
Frame = +3 / -3
Query: 771 LLSDSKNXXXXXXXXXXXXXXXXXMNFG*LTRLLNRFSLTYSATLA 908
LLS +N MNFG L +LL R TYSA A
Sbjct: 307 LLSAFRNSESV*LNVSAIAAFVSVMNFGCLIKLLKRCFFTYSAARA 170
Score = 26.3 bits (51), Expect(2) = 1e-045
Identities = 15/34 (44%), Positives = 18/34 (52%)
Frame = -2 / +2
Query: 524 TLKAICGCGSGDPRGGC**HTRVSYPCK*WAVGC 423
T KA+C D GG TR+ +P * AVGC
Sbjct: 557 TFKAVCCS*PRDQGGGGRQLTRIPHPR**RAVGC 658
>gb|AL507890.1|AL507890 AL507890 Hordeum vulgare Barke developing caryopsis (3.-15.DAP)
Hordeum vulgare subsp. vulgare cDNA clone HY07C13V 5',
mRNA sequence
Length = 541
Score = 222 bits (480), Expect(2) = 8e-066
Identities = 90/108 (83%), Positives = 101/108 (93%)
Frame = -3 / +3
Query: 1072 SSVSGGGLSQNGRFSYGYASSPGKRASMEDFYETKIDCVDGQIVGLFGVFDGHGGAKVAE 893
S VSGGGLSQN +FSYGYASS GKRASMEDFYET+I+ VDGQ++GLFGVFDGHGGAKVAE
Sbjct: 132 SPVSGGGLSQNSKFSYGYASSLGKRASMEDFYETRIESVDGQLIGLFGVFDGHGGAKVAE 311
Query: 892 YVKENLFNNLVSHPKFISDTKVAIDDAYKSTDSEFLESDSSQNQCGST 749
YVK NLF++L+ HPK +SDTKVAIDD+YKSTDSEFLESDS+QNQCGST
Sbjct: 312 YVKHNLFSHLLRHPKXMSDTKVAIDDSYKSTDSEFLESDSTQNQCGST 455
Score = 170 bits (366), Expect(2) = 4e-049
Identities = 75/106 (70%), Positives = 83/106 (78%)
Frame = +2 / -3
Query: 752 *PTLILTTVRF*EFTVGAFISIIYSDFSITDELWMTNKIVEQVFFNILCYLSTTMTIKNS 931
*PTL+L+TVRF E TVG FI IIYS F +T LWM K+ E+V F+ILCY STTMTIKNS
Sbjct: 452 *PTLVLSTVRFQELTVGTFIRIIYSHFCVTHXLWMPKKMAEEVVFHILCYFSTTMTIKNS 273
Query: 932 KKTNYLAINTINFCLIEVFHGCPFTRGACIAIAKSTILAEAAAADG 1069
K TN L I+T N CLI+VFHG PFT GA I IAK TILAEAAAADG
Sbjct: 272 K*TNKLPIDTFNSCLIKVFHGSPFTEGARITIAKLTILAEAAAADG 135
Score = 113 bits (242), Expect(2) = 5e-029
Identities = 62/108 (57%), Positives = 70/108 (64%)
Frame = -1 / +1
Query: 1074 DPPSAAAASARMVDLAMAMQAPLVKGHPWKTSMRQKLIVLMARXXXXXXXXXXXXXLR*Q 895
D PSAAAASAR+V LAM M+AP VKG PWKT MRQ+L V M L+*Q
Sbjct: 130 DRPSAAAASARIVSLAMVMRAPSVKGLPWKTFMRQELKVSMGSLLVYLEFLMVMVVLK*Q 309
Query: 894 SMLKKTCSTILLVIQSSSVILKSL*MMLIKAPTVNS*NLTVVKINVGQ 751
SM T S I L IQ S V K L*M+LIK PTV+S NLTV+K +VGQ
Sbjct: 310 SM*NTTSSAIFLGIQXS*VTQKWL*MILIKVPTVSSWNLTVLKTSVGQ 453
Score = 77.1 bits (162), Expect(4) = 1e-035
Identities = 33/41 (80%), Positives = 35/41 (85%)
Frame = -2 / +2
Query: 1073 ILRQRRRPQPEW*I*LWLCKLPW*KGIHGRLL*DKN*LC*W 951
I RQRRRPQPE *+*LWLC+LP *KG HGRLL*DKN* C W
Sbjct: 131 IARQRRRPQPE**V*LWLCELPR*KGFHGRLL*DKN*KCRW 253
Score = 66.6 bits (139), Expect(4) = 1e-035
Identities = 33/53 (62%), Positives = 41/53 (77%)
Frame = -2 / +2
Query: 908 C*GSRVC*RKPVQQSC*SSKVHQ*Y*SRYR*CL*KHRQ*ILRI*Q*SKSMWVN 750
C* SRVC +P+Q S *+SK H+*+ S YR* L*K+RQ*+L I*Q SK +WVN
Sbjct: 296 C*SSRVCETQPLQPSS*ASKXHE*HKSGYR*FL*KYRQ*VLGI*QYSKPVWVN 454
Score = 58.8 bits (122), Expect(4) = 6e-027
Identities = 27/43 (62%), Positives = 30/43 (69%)
Frame = +1 / -2
Query: 751 LTHIDFDYCQILRIHCRCFYKHHL*RL*YH**TLDD*QDC*TG 879
LTH F+YCQI R HCR FYK+HL* L H * LD *+D * G
Sbjct: 453 LTHTGFEYCQIPRTHCRYFYKNHL*PLLCHS*XLDA*EDG*RG 325
Score = 48.7 bits (100), Expect(2) = 8e-066
Identities = 21/23 (91%), Positives = 21/23 (91%)
Frame = -3 / +1
Query: 757 GSTASTAVLVGDRLFVANVGDSR 689
G ASTAVLVGDRLFVANVGDSR
Sbjct: 448 GQPASTAVLVGDRLFVANVGDSR 516
Score = 45.1 bits (92), Expect(2) = 4e-049
Identities = 19/20 (95%), Positives = 19/20 (95%)
Frame = +3 / -3
Query: 690 LESPTFATKRRSPTSTAVDA 749
LESPTFATK RSPTSTAVDA
Sbjct: 515 LESPTFATKXRSPTSTAVDA 456
Score = 44.6 bits (91), Expect(4) = 1e-035
Identities = 16/20 (80%), Positives = 16/20 (80%)
Frame = -2 / +3
Query: 746 INCCTCW*SSLRRKCW*L*G 687
INCCTCW*S L RKCW L G
Sbjct: 459 INCCTCW*SXLCRKCWRLQG 518
Score = 44.1 bits (90), Expect(4) = 6e-027
Identities = 14/21 (66%), Positives = 18/21 (85%)
Frame = +1 / -2
Query: 946 SGHQHNQFLSHRSLPWMPFYQ 1008
+ H+H QFLSH+SLPW PFY+
Sbjct: 258 AAHRHFQFLSHKSLPWKPFYR 196
Score = 42.8 bits (87), Expect(4) = 6e-027
Identities = 16/21 (76%), Positives = 19/21 (90%)
Frame = +2 / -2
Query: 686 SPRVTNICDEETITNKYSS*C 748
+P V+NICD+E ITNKYSS*C
Sbjct: 519 APGVSNICDKEXITNKYSS*C 457
Score = 34.5 bits (69), Expect(2) = 5e-029
Identities = 16/20 (80%), Positives = 16/20 (80%)
Frame = -1 / +2
Query: 747 HQLLYLLVIVSSSQMLVTLG 688
HQLLYLLVI S SQML T G
Sbjct: 458 HQLLYLLVIXSLSQMLETPG 517
Score = 30.4 bits (60), Expect(4) = 6e-027
Identities = 10/11 (90%), Positives = 10/11 (90%)
Frame = +3 / -1
Query: 1041 FWLRPPPLTED 1073
FWLRPPPLT D
Sbjct: 163 FWLRPPPLTGD 131
Score = 21.7 bits (41), Expect(4) = 1e-035
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = -2 / +1
Query: 689 GYHMQGRK 666
GYHM GRK
Sbjct: 517 GYHMXGRK 540
>gb|BI781131.2|BI781131 EBma03_SQ001_I09_R maternal, 8 DPA, no treatment, cv Optic, EBma03
Hordeum vulgare subsp. vulgare cDNA clone
EBma03_SQ001_I09 5', mRNA sequence
Length = 500
Score = 247 bits (533), Expect = 1e-064
Identities = 102/154 (66%), Positives = 128/154 (83%)
Frame = -3 / +3
Query: 748 ASTAVLVGDRLFVANVGDSRAIICREGNAIAVSKDHKPDQTDERQRIEDAGGFVMWAGTW 569
ASTAVLVGD L+VANVGDSRA+I + G A A+S DHKP++TDER+RIE+AGG V+WAGTW
Sbjct: 3 ASTAVLVGDHLYVANVGDSRAVISKAGKARALSVDHKPNRTDERKRIENAGGVVIWAGTW 182
Query: 568 RVGGVLAVSRAFGDKLLKQYVVVDPEIREEVVDDTLEFLILASDGLWDVVSNEEAVAMTR 389
RVGGVLA+SRAFG++LLK +VV +PEI+EE+V+ LE L+LASDGLWD V NEEAV++ +
Sbjct: 183 RVGGVLAMSRAFGNRLLKPFVVAEPEIQEELVNGELESLVLASDGLWDAVXNEEAVSLAK 362
Query: 388 SIQDPEEAAKMLLQEAYKRESSDNITCVVVHFLH 287
+ PE AA+ L + AY R S+DNITC+VV F H
Sbjct: 363 TEDVPESAARKLTEIAYSRGSADNITCIVVQFHH 464
Score = 101 bits (216), Expect(2) = 2e-028
Identities = 48/78 (61%), Positives = 55/78 (70%)
Frame = +3 / -2
Query: 516 FKSLSPKARETASTPPTRHVPAHITKPPASSIRCRSSV*SGL*SFETAIAFPSLHMIALE 695
F P AR+ ASTPPT VPA +T PPA SI RSSV GL*S E+A+AFP+ + A E
Sbjct: 235 FSRRLPNARDIASTPPTLQVPAQMTTPPAFSILLRSSVLLGL*STESALAFPAFEITARE 56
Query: 696 SPTFATKRRSPTSTAVDA 749
SPTFAT R SPT TAV+A
Sbjct: 55 SPTFATYRWSPTKTAVEA 2
Score = 44.1 bits (90), Expect(2) = 2e-028
Identities = 26/53 (49%), Positives = 28/53 (52%)
Frame = +3 / -2
Query: 297 CTTTQVMLSLLSLLYASCKSIFAASSGS*MDLVIATASSLETTSHSPSLARIR 455
CTT V+LS L A S AA SG+ TASS T S SPSLAR R
Sbjct: 454 CTTMHVILSALPRE*AISVSFLAADSGTSSVFARDTASSFXTASQSPSLARTR 296
>gb|CA024367.1|CA024367 HZ49B19r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ49B19
5-PRIME, mRNA sequence
Length = 553
Score = 246 bits (531), Expect = 2e-064
Identities = 104/126 (82%), Positives = 113/126 (89%)
Frame = -3 / +2
Query: 658 AVSKDHKPDQTDERQRIEDAGGFVMWAGTWRVGGVLAVSRAFGDKLLKQYVVVDPEIREE 479
AVS+DHKPDQTDERQRIEDAGGFVMWAGTWRVGGVLAVSRAFGDKLLKQYVV DPEI+EE
Sbjct: 11 AVSRDHKPDQTDERQRIEDAGGFVMWAGTWRVGGVLAVSRAFGDKLLKQYVVADPEIKEE 190
Query: 478 VVDDTLEFLILASDGLWDVVSNEEAVAMTRSIQDPEEAAKMLLQEAYKRESSDNITCVVV 299
VVD +LEFLILASDGLWDVV+NEEAVAM + I D ++AAK LL EA +R S+DNITCVVV
Sbjct: 191 VVDSSLEFLILASDGLWDVVTNEEAVAMVKPIVDSQQAAKKLLVEATRRGSADNITCVVV 370
Query: 298 HFLHGQ 281
FL Q
Sbjct: 371 RFLDQQ 388
Score = 165 bits (354), Expect = 5e-040
Identities = 77/127 (60%), Positives = 85/127 (66%)
Frame = +3 / -2
Query: 282 CPCKKCTTTQVMLSLLSLLYASCKSIFAASSGS*MDLVIATASSLETTSHSPSLARIRNX 461
C +K TTTQVMLS L L AS +S AA S + +ATASSL TTSHSPSLAR+RN
Sbjct: 387 CWSRKRTTTQVMLSALPLRVASTRSFLAACCESTIGFTMATASSLVTTSHSPSLARMRNS 208
Query: 462 XXXXXXXXXXXXXXXXYCFKSLSPKARETASTPPTRHVPAHITKPPASSIRCRSSV*SGL 641
YCF SLSP ARETASTPPTRHVPAH+TKPPASSI C SSV SGL
Sbjct: 207 RELSTTSSLISGSATTYCFNSLSPNARETASTPPTRHVPAHMTKPPASSILCLSSVWSGL 28
Query: 642 *SFETAI 662
S +TA+
Sbjct: 27 WSLDTAL 7
Score = 110 bits (235), Expect = 1e-023
Identities = 51/122 (41%), Positives = 75/122 (61%)
Frame = +2 / -1
Query: 281 LPMQEVHDDASYVVTALPLVRLLQEHLCSLFWVLNGSSHRDSFLVRDHIPQPITCKDKKL 460
L +++ DDA VV A P RL +E L L V + H FLV +PQ + +D++L
Sbjct: 388 LLVEKTDDDAGDVVGASPPGRLDEELLGRLLRVHDRLHHGHRFLVGHDVPQSVARQDEEL 209
Query: 461 ECVINNLLSDLRIHNHILL*EFVTKSTRNSKYTTNAPCSCPHHKTSSIFNTLPLISLIRL 640
+ +++LL DL I NH+LL +FVTK +RN K+ PC+CPH + S I LPL+ L+RL
Sbjct: 208 QRAVDHLLLDLWIGNHVLLQQFVTKRSRNGKHAAYTPCTCPHDEASGILYPLPLVCLVRL 29
Query: 641 VI 646
++
Sbjct: 28 MV 23
>gb|CA028306.1|CA028306 HZ61J14r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ61J14
5-PRIME, mRNA sequence
Length = 489
Score = 246 bits (531), Expect = 2e-064
Identities = 104/126 (82%), Positives = 113/126 (89%)
Frame = -3 / +2
Query: 658 AVSKDHKPDQTDERQRIEDAGGFVMWAGTWRVGGVLAVSRAFGDKLLKQYVVVDPEIREE 479
AVS+DHKPDQTDERQRIEDAGGFVMWAGTWRVGGVLAVSRAFGDKLLKQYVV DPEI+EE
Sbjct: 11 AVSRDHKPDQTDERQRIEDAGGFVMWAGTWRVGGVLAVSRAFGDKLLKQYVVADPEIKEE 190
Query: 478 VVDDTLEFLILASDGLWDVVSNEEAVAMTRSIQDPEEAAKMLLQEAYKRESSDNITCVVV 299
VVD +LEFLILASDGLWDVV+NEEAVAM + I D ++AAK LL EA +R S+DNITCVVV
Sbjct: 191 VVDSSLEFLILASDGLWDVVTNEEAVAMVKPIVDSQQAAKKLLVEATRRGSADNITCVVV 370
Query: 298 HFLHGQ 281
FL Q
Sbjct: 371 RFLDQQ 388
Score = 165 bits (354), Expect = 5e-040
Identities = 77/127 (60%), Positives = 85/127 (66%)
Frame = +3 / -1
Query: 282 CPCKKCTTTQVMLSLLSLLYASCKSIFAASSGS*MDLVIATASSLETTSHSPSLARIRNX 461
C +K TTTQVMLS L L AS +S AA S + +ATASSL TTSHSPSLAR+RN
Sbjct: 387 CWSRKRTTTQVMLSALPLRVASTRSFLAACCESTIGFTMATASSLVTTSHSPSLARMRNS 208
Query: 462 XXXXXXXXXXXXXXXXYCFKSLSPKARETASTPPTRHVPAHITKPPASSIRCRSSV*SGL 641
YCF SLSP ARETASTPPTRHVPAH+TKPPASSI C SSV SGL
Sbjct: 207 RELSTTSSLISGSATTYCFNSLSPNARETASTPPTRHVPAHMTKPPASSILCLSSVWSGL 28
Query: 642 *SFETAI 662
S +TA+
Sbjct: 27 WSLDTAL 7
Score = 110 bits (235), Expect = 1e-023
Identities = 51/122 (41%), Positives = 75/122 (61%)
Frame = +2 / -3
Query: 281 LPMQEVHDDASYVVTALPLVRLLQEHLCSLFWVLNGSSHRDSFLVRDHIPQPITCKDKKL 460
L +++ DDA VV A P RL +E L L V + H FLV +PQ + +D++L
Sbjct: 388 LLVEKTDDDAGDVVGASPPGRLDEELLGRLLRVHDRLHHGHRFLVGHDVPQSVARQDEEL 209
Query: 461 ECVINNLLSDLRIHNHILL*EFVTKSTRNSKYTTNAPCSCPHHKTSSIFNTLPLISLIRL 640
+ +++LL DL I NH+LL +FVTK +RN K+ PC+CPH + S I LPL+ L+RL
Sbjct: 208 QRAVDHLLLDLWIGNHVLLQQFVTKRSRNGKHAAYTPCTCPHDEASGILYPLPLVCLVRL 29
Query: 641 VI 646
++
Sbjct: 28 MV 23
>gb|CA022106.1|CA022106 HZ42C22r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ42C22
5-PRIME, mRNA sequence
Length = 530
Score = 158 bits (340), Expect(2) = 2e-064
Identities = 63/78 (80%), Positives = 72/78 (92%)
Frame = -3 / +1
Query: 1072 SSVSGGGLSQNGRFSYGYASSPGKRASMEDFYETKIDCVDGQIVGLFGVFDGHGGAKVAE 893
S VSGGGLSQN +FSYGYASS GKRASMEDFYET+I+ VDGQ++GLFGVFDGHGGAKVAE
Sbjct: 151 SPVSGGGLSQNSKFSYGYASSLGKRASMEDFYETRIESVDGQLIGLFGVFDGHGGAKVAE 330
Query: 892 YVKENLFNNLVSHPKFIS 839
YVK NLF++L+ HPKF+S
Sbjct: 331 YVKHNLFSHLLRHPKFMS 384
Score = 129 bits (276), Expect(2) = 7e-048
Identities = 56/77 (72%), Positives = 61/77 (79%)
Frame = +2 / -3
Query: 839 TDELWMTNKIVEQVFFNILCYLSTTMTIKNSKKTNYLAINTINFCLIEVFHGCPFTRGAC 1018
T ELWM K+ E+V F+ILCY STTMTIKNSK TN L I+T N CLI+VFHG PFT GA
Sbjct: 384 THELWMPKKMAEEVVFHILCYFSTTMTIKNSK*TNKLPIDTFNSCLIKVFHGSPFTEGAR 205
Query: 1019 IAIAKSTILAEAAAADG 1069
I IAK TILAEAAAADG
Sbjct: 204 ITIAKLTILAEAAAADG 154
Score = 110 bits (234), Expect(2) = 2e-064
Identities = 48/50 (96%), Positives = 48/50 (96%)
Frame = -3 / +3
Query: 460 EFLILASDGLWDVVSNEEAVAMTRSIQDPEEAAKMLLQEAYKRESSDNIT 311
EFLILASDGLWDVVSNEEAV MTRSIQDPEEAAK LLQEAYKRESSDNIT
Sbjct: 381 EFLILASDGLWDVVSNEEAVDMTRSIQDPEEAAKRLLQEAYKRESSDNIT 530
Score = 85.4 bits (180), Expect(3) = 5e-037
Identities = 32/49 (65%), Positives = 39/49 (79%)
Frame = -2 / +2
Query: 458 VSYPCK*WAVGCGL*RGSCRDD*IHSGPRRGCKDALARGVQEGEQ*QHN 312
VS+PCK W +GCGL*RG CR D +H+ PR C++ALA G+Q GEQ*QHN
Sbjct: 383 VSHPCKRWTLGCGL*RGGCRHDPVHTRPRGSCEEALAGGLQAGEQ*QHN 529
Score = 84.5 bits (178), Expect(2) = 7e-048
Identities = 40/49 (81%), Positives = 44/49 (89%)
Frame = +3 / -2
Query: 312 VMLSLLSLLYASCKSIFAASSGS*MDLVIATASSLETTSHSPSLARIRN 458
VMLSLLS L ASCKS+FAASSGS MD V++TASSLETTS SPSLAR+RN
Sbjct: 529 VMLSLLSRL*ASCKSLFAASSGSCMDRVMSTASSLETTSQSPSLARMRN 383
Score = 81.3 bits (171), Expect(4) = 1e-029
Identities = 34/49 (69%), Positives = 35/49 (71%)
Frame = +1 / -3
Query: 313 LCCHCSPSCTPLARASLQPLLGPEWI*SSRQLPR*RPHPTAHHLQG*ET 459
LCCHCSP+C P ARAS Q LG W S RQ PR*RPHP H LQG*ET
Sbjct: 528 LCCHCSPACRPPARASSQLPLGLVWTGSCRQPPR*RPHPKVHRLQG*ET 382
Score = 79.0 bits (166), Expect(2) = 1e-029
Identities = 43/77 (55%), Positives = 47/77 (61%)
Frame = -1 / +2
Query: 1074 DPPSAAAASARMVDLAMAMQAPLVKGHPWKTSMRQKLIVLMARXXXXXXXXXXXXXLR*Q 895
D PSAAAASAR+V LAM M+AP VKG PWKT MRQ+L V M L+*Q
Sbjct: 149 DRPSAAAASARIVSLAMVMRAPSVKGLPWKTFMRQELKVSMGSLLVYLEFLMVMVVLK*Q 328
Query: 894 SMLKKTCSTILLVIQSS 844
SM T S I L IQSS
Sbjct: 329 SM*NTTSSAIFLGIQSS 379
Score = 77.1 bits (162), Expect(3) = 5e-037
Identities = 33/41 (80%), Positives = 35/41 (85%)
Frame = -2 / +3
Query: 1073 ILRQRRRPQPEW*I*LWLCKLPW*KGIHGRLL*DKN*LC*W 951
I RQRRRPQPE *+*LWLC+LP *KG HGRLL*DKN* C W
Sbjct: 150 IARQRRRPQPE**V*LWLCELPR*KGFHGRLL*DKN*KCRW 272
Score = 73.5 bits (154), Expect(2) = 1e-029
Identities = 32/49 (65%), Positives = 39/49 (79%)
Frame = -1 / +1
Query: 459 SFLSLQVMGCGMWSLTRKLSR*LDPFRTQKRLQRCSCKRRTRGRAVTT* 313
SF SLQ M GMWSLTR+LS * P++TQ++L+R SC+R T GRAVTT*
Sbjct: 382 SFSSLQAMDFGMWSLTRRLST*PGPYKTQRKLRRGSCRRPTSGRAVTT* 528
Score = 44.1 bits (90), Expect(4) = 1e-029
Identities = 14/21 (66%), Positives = 18/21 (85%)
Frame = +1 / -2
Query: 946 SGHQHNQFLSHRSLPWMPFYQ 1008
+ H+H QFLSH+SLPW PFY+
Sbjct: 277 AAHRHFQFLSHKSLPWKPFYR 215
Score = 34.1 bits (68), Expect(3) = 5e-037
Identities = 14/23 (60%), Positives = 18/23 (78%)
Frame = -2 / +3
Query: 908 C*GSRVC*RKPVQQSC*SSKVHQ 840
C* SRVC +P+Q S *+SKVH+
Sbjct: 315 C*SSRVCETQPLQPSS*ASKVHE 383
Score = 33.1 bits (66), Expect(4) = 1e-029
Identities = 15/22 (68%), Positives = 15/22 (68%)
Frame = +3 / -1
Query: 843 MNFG*LTRLLNRFSLTYSATLA 908
MNFG L R L R TYSATLA
Sbjct: 380 MNFGCLRRWLKRLCFTYSATLA 315
Score = 30.4 bits (60), Expect(4) = 1e-029
Identities = 10/11 (90%), Positives = 10/11 (90%)
Frame = +3 / -1
Query: 1041 FWLRPPPLTED 1073
FWLRPPPLT D
Sbjct: 182 FWLRPPPLTGD 150
>gb|BE422031.1|BE422031 HWM019cB.10r ITEC HWM Barley Leaf Library Hordeum vulgare subsp.
vulgare cDNA clone HWM019cB.10, mRNA sequence
Length = 1214
Score = 130 bits (279), Expect(3) = 4e-063
Identities = 49/92 (53%), Positives = 71/92 (77%)
Frame = -3 / +2
Query: 1003 KRASMEDFYETKIDCVDGQIVGLFGVFDGHGGAKVAEYVKENLFNNLVSHPKFISDTKVA 824
+ ++ EDFY T +D VDG+ VGLFGVFDGHGGA+ AEYVK++LF+NL+ HPKF++DTK A
Sbjct: 116 RNSAREDFYFTLVDDVDGETVGLFGVFDGHGGARAAEYVKKHLFSNLIKHPKFMTDTKAA 295
Query: 823 IDDAYKSTDSEFLESDSSQNQCGSTASTAVLV 728
I + + TDSEFL++DSS + + ++ ++
Sbjct: 296 IAETFNHTDSEFLKADSSHTRDAGSTASTAIL 391
Score = 83.1 bits (175), Expect(3) = 4e-063
Identities = 34/37 (91%), Positives = 36/37 (97%)
Frame = -3 / +2
Query: 583 WAGTWRVGGVLAVSRAFGDKLLKQYVVVDPEIREEVV 473
+AGTWRVGGVLAVSRAFGDKLLKQYVV DPEI+EEVV
Sbjct: 815 FAGTWRVGGVLAVSRAFGDKLLKQYVVADPEIKEEVV 925
Score = 73.5 bits (154), Expect(3) = 4e-063
Identities = 28/31 (90%), Positives = 31/31 (100%)
Frame = -3 / +1
Query: 667 NAIAVSKDHKPDQTDERQRIEDAGGFVMWAG 575
+AIAVS+DHKPDQTDERQRIE+AGGFVMWAG
Sbjct: 640 SAIAVSRDHKPDQTDERQRIEEAGGFVMWAG 732
Score = 60.2 bits (125), Expect(4) = 9e-031
Identities = 23/24 (95%), Positives = 23/24 (95%)
Frame = +3 / -3
Query: 510 YCFKSLSPKARETASTPPTRHVPA 581
YCFKSLSPKARETA TPPTRHVPA
Sbjct: 888 YCFKSLSPKARETARTPPTRHVPA 817
Score = 57.9 bits (120), Expect(4) = 9e-031
Identities = 26/31 (83%), Positives = 27/31 (87%)
Frame = +3 / -1
Query: 573 VPAHITKPPASSIRCRSSV*SGL*SFETAIA 665
+PAHITKPPASSI C SSV SGL*S ETAIA
Sbjct: 734 IPAHITKPPASSILCLSSVWSGL*SLETAIA 642
Score = 49.2 bits (101), Expect(4) = 9e-031
Identities = 20/33 (60%), Positives = 24/33 (72%)
Frame = +3 / -3
Query: 660 IAFPSLHMIALESPTFATKRRSPTSTAVDAVDP 758
+ FP L ALESPTFAT +R PT AV+AV+P
Sbjct: 462 LPFPPLETTALESPTFATTKRPPTRIAVEAVEP 364
Score = 29.5 bits (58), Expect(4) = 9e-031
Identities = 17/46 (36%), Positives = 19/46 (41%)
Frame = +3 / -3
Query: 771 LLSDSKNXXXXXXXXXXXXXXXXXMNFG*LTRLLNRFSLTYSATLA 908
LLS +N MNFG L +LL R TYSA A
Sbjct: 348 LLSAFRNSESV*LNVSAIAAFVSVMNFGCLIKLLKRCFFTYSAARA 211
>gb|BM440951.2|BM440951 EBro08_SQ004_P23_R root, 3 week, drought-stressed, cv Optic, EBro08
Hordeum vulgare subsp. vulgare cDNA clone
EBro08_SQ004_P23 5', mRNA sequence
Length = 695
Score = 228 bits (492), Expect = 5e-059
Identities = 93/144 (64%), Positives = 119/144 (82%)
Frame = -3 / +2
Query: 718 LFVANVGDSRAIICREGNAIAVSKDHKPDQTDERQRIEDAGGFVMWAGTWRVGGVLAVSR 539
L+VANVGDSRA+I + G A A+S DHKP++TDER+RIE+AGG V+WAGTWRVGGVLA+SR
Sbjct: 2 LYVANVGDSRAVISKAGKARALSVDHKPNRTDERKRIENAGGVVIWAGTWRVGGVLAMSR 181
Query: 538 AFGDKLLKQYVVVDPEIREEVVDDTLEFLILASDGLWDVVSNEEAVAMTRSIQDPEEAAK 359
AFG++LLK +VV +PEI+EE+V+ LE L+LASDGLWD V NEEAV++ ++ PE AA+
Sbjct: 182 AFGNRLLKPFVVAEPEIQEELVNGELESLVLASDGLWDAVENEEAVSLAKTEDVPESAAR 361
Query: 358 MLLQEAYKRESSDNITCVVVHFLH 287
L + AY R S+DNITC+VV F H
Sbjct: 362 KLTEIAYSRGSADNITCIVVQFHH 433
Score = 87.2 bits (184), Expect(2) = 4e-024
Identities = 41/68 (60%), Positives = 47/68 (69%)
Frame = +3 / -3
Query: 516 FKSLSPKARETASTPPTRHVPAHITKPPASSIRCRSSV*SGL*SFETAIAFPSLHMIALE 695
F P AR+ ASTPPT VPA +T PPA SI RSSV GL*S E+A+AFP+ + A E
Sbjct: 204 FSRRLPNARDIASTPPTLQVPAQMTTPPAFSILLRSSVLLGL*STESALAFPAFEITARE 25
Query: 696 SPTFATKR 719
SPTFAT R
Sbjct: 24 SPTFATYR 1
Score = 44.6 bits (91), Expect(2) = 4e-024
Identities = 26/53 (49%), Positives = 28/53 (52%)
Frame = +3 / -3
Query: 297 CTTTQVMLSLLSLLYASCKSIFAASSGS*MDLVIATASSLETTSHSPSLARIR 455
CTT V+LS L A S AA SG+ TASS T S SPSLAR R
Sbjct: 423 CTTMHVILSALPRE*AISVSFLAADSGTSSVFARDTASSFSTASQSPSLARTR 265
>gb|CA015149.1|CA015149 HT13G24r HT Hordeum vulgare subsp. vulgare cDNA clone HT13G24
5-PRIME, mRNA sequence
Length = 593
Score = 227 bits (491), Expect = 6e-059
Identities = 97/118 (82%), Positives = 105/118 (88%)
Frame = -3 / -1
Query: 634 DQTDERQRIEDAGGFVMWAGTWRVGGVLAVSRAFGDKLLKQYVVVDPEIREEVVDDTLEF 455
DQTDERQRIEDAGGFVMWAGTWRVGGVLAVSRAFGDKLLKQYVV DPEI+EEVVD +LEF
Sbjct: 593 DQTDERQRIEDAGGFVMWAGTWRVGGVLAVSRAFGDKLLKQYVVADPEIKEEVVDSSLEF 414
Query: 454 LILASDGLWDVVSNEEAVAMTRSIQDPEEAAKMLLQEAYKRESSDNITCVVVHFLHGQ 281
LILASDGLWDVV+NEEAVAM + I D ++AAK LL EA +R S+DNITCVVV FL Q
Sbjct: 413 LILASDGLWDVVTNEEAVAMVKPIVDSQQAAKKLLVEATRRGSADNITCVVVRFLDQQ 240
Score = 154 bits (331), Expect = 8e-037
Identities = 71/116 (61%), Positives = 77/116 (66%)
Frame = +3 / +1
Query: 282 CPCKKCTTTQVMLSLLSLLYASCKSIFAASSGS*MDLVIATASSLETTSHSPSLARIRNX 461
C +K TTTQVMLS L L AS +S AA S + +ATASSL TTSHSPSLAR+RN
Sbjct: 241 CWSRKRTTTQVMLSALPLRVASTRSFLAACCESTIGFTMATASSLVTTSHSPSLARMRNS 420
Query: 462 XXXXXXXXXXXXXXXXYCFKSLSPKARETASTPPTRHVPAHITKPPASSIRCRSSV 629
YCF SLSP ARETASTPPTRHVPAH+TKPPASSI C SSV
Sbjct: 421 RELSTTSSLISGSATTYCFNSLSPNARETASTPPTRHVPAHMTKPPASSILCLSSV 588
Score = 104 bits (222), Expect = 8e-022
Identities = 49/118 (41%), Positives = 71/118 (60%)
Frame = +2 / +3
Query: 281 LPMQEVHDDASYVVTALPLVRLLQEHLCSLFWVLNGSSHRDSFLVRDHIPQPITCKDKKL 460
L +++ DDA VV A P RL +E L L V + H FLV +PQ + +D++L
Sbjct: 240 LLVEKTDDDAGDVVGASPPGRLDEELLGRLLRVHDRLHHGHRFLVGHDVPQSVARQDEEL 419
Query: 461 ECVINNLLSDLRIHNHILL*EFVTKSTRNSKYTTNAPCSCPHHKTSSIFNTLPLISLI 634
+ +++LL DL I NH+LL +FVTK +RN K+ PC+CPH + S I LPL+ L+
Sbjct: 420 QRAVDHLLLDLWIGNHVLLQQFVTKRSRNGKHAAYTPCTCPHDEASGILYPLPLVCLV 593
>gb|BU971207.1|BU971207 HB16O21r BC Hordeum vulgare subsp. vulgare cDNA clone HB16O21
5-PRIME, mRNA sequence
Length = 420
Score = 226 bits (487), Expect = 2e-058
Identities = 95/119 (79%), Positives = 107/119 (89%)
Frame = -3 / +3
Query: 628 TDERQRIEDAGGFVMWAGTWRVGGVLAVSRAFGDKLLKQYVVVDPEIREEVVDDTLEFLI 449
TDERQRIE+AGGFVMWAGTWRVGGVLAVSRAFGDKLLKQYVV DPEI+EEVVD +LEFLI
Sbjct: 12 TDERQRIEEAGGFVMWAGTWRVGGVLAVSRAFGDKLLKQYVVADPEIKEEVVDSSLEFLI 191
Query: 448 LASDGLWDVVSNEEAVAMTRSIQDPEEAAKMLLQEAYKRESSDNITCVVVHFLHGQGSS 272
LASDGLWDVV+N+EAVAM + I+DPE+AAK LLQEA +R S+DNIT V+V FL G +S
Sbjct: 192 LASDGLWDVVTNDEAVAMVKPIEDPEQAAKGLLQEASRRGSADNITVVIVRFLDGTTTS 368
Score = 161 bits (347), Expect = 5e-039
Identities = 76/115 (66%), Positives = 79/115 (68%)
Frame = +3 / -3
Query: 285 PCKKCTTTQVMLSLLSLLYASCKSIFAASSGS*MDLVIATASSLETTSHSPSLARIRNXX 464
P KK T T VMLS L L AS S FAA SGS + L +ATASSL TTSHSPSLAR+RN
Sbjct: 355 PSKKRTMTTVMLSALPLREAS*SSPFAACSGSSIGLTMATASSLVTTSHSPSLARMRNSS 176
Query: 465 XXXXXXXXXXXXXXXYCFKSLSPKARETASTPPTRHVPAHITKPPASSIRCRSSV 629
YCFKSLSPKARETA TPPTRHVPAHITKPPASSI C SSV
Sbjct: 175 ELSTTSSLISGSATTYCFKSLSPKARETARTPPTRHVPAHITKPPASSILCLSSV 11
Score = 118 bits (253), Expect = 4e-026
Identities = 51/113 (45%), Positives = 74/113 (65%)
Frame = +2 / -2
Query: 287 MQEVHDDASYVVTALPLVRLLQEHLCSLFWVLNGSSHRDSFLVRDHIPQPITCKDKKLEC 466
+QE ++D VV+ P L+ L L W+L H +SF+V +IPQP+T +D++ E
Sbjct: 353 VQEANNDDGDVVSTAPSGSFLK*SLRCLLWILYWLDHGNSFIVSYNIPQPVTSEDEEFE* 174
Query: 467 VINNLLSDLRIHNHILL*EFVTKSTRNSKYTTNAPCSCPHHKTSSIFNTLPLI 625
+++LL DL + +ILL*+F+TK +RNSK TTN PC PHHK SS N+L L+
Sbjct: 173 AVDHLLLDLWVSYNILL*KFITKGSRNSKNTTNTPCPSPHHKASSFLNSLSLV 15
>gb|BU995730.1|BU995730 HM11D01r HM Hordeum vulgare subsp. vulgare cDNA clone HM11D01
5-PRIME, mRNA sequence
Length = 544
Score = 195 bits (420), Expect(3) = 3e-056
Identities = 78/110 (70%), Positives = 98/110 (89%)
Frame = -3 / +2
Query: 718 LFVANVGDSRAIICREGNAIAVSKDHKPDQTDERQRIEDAGGFVMWAGTWRVGGVLAVSR 539
L+VANVGDSRA+I + G AIA+S DHKPD++DER+RIE+AGG V ++GTWRVGGVLA+SR
Sbjct: 89 LYVANVGDSRAVISKAGKAIALSDDHKPDRSDERERIENAGGVVTFSGTWRVGGVLAMSR 268
Query: 538 AFGDKLLKQYVVVDPEIREEVVDDTLEFLILASDGLWDVVSNEEAVAMTR 389
AFGD+LLK++VV +PEI+E+ +DD LE+LILASDGLWDVVSNE AVA +
Sbjct: 269 AFGDRLLKRFVVAEPEIQEQEIDDELEYLILASDGLWDVVSNEHAVAFVK 418
Score = 91.3 bits (193), Expect(2) = 2e-022
Identities = 42/68 (61%), Positives = 49/68 (72%)
Frame = +3 / -2
Query: 516 FKSLSPKARETASTPPTRHVPAHITKPPASSIRCRSSV*SGL*SFETAIAFPSLHMIALE 695
F SP A + ASTPPT HVP ++T PPA SIR RSS+ SGL*S E+AIA P+ + A E
Sbjct: 291 FNKRSPNALDIASTPPTLHVPLNVTTPPAFSIRSRSSLLSGL*SSESAIALPAFDITARE 112
Query: 696 SPTFATKR 719
SPTFAT R
Sbjct: 111 SPTFAT*R 88
Score = 40.5 bits (82), Expect(3) = 3e-056
Identities = 15/28 (53%), Positives = 21/28 (75%)
Frame = -3 / +3
Query: 376 PEEAAKMLLQEAYKRESSDNITCVVVHF 293
PE AA+ L + A+ R S+DNITC+V+ F
Sbjct: 432 PEAAARKLTEIAFARGSTDNITCIVIEF 515
Score = 34.5 bits (69), Expect(2) = 2e-022
Identities = 14/19 (73%), Positives = 16/19 (84%)
Frame = +3 / -2
Query: 399 ATASSLETTSHSPSLARIR 455
ATA S +TTSH PSLA+IR
Sbjct: 408 ATACSFDTTSHRPSLAKIR 352
Score = 22.1 bits (42), Expect(3) = 3e-056
Identities = 8/10 (80%), Positives = 10/10 (100%)
Frame = -3 / +3
Query: 757 GSTASTAVLV 728
GSTASTA+L+
Sbjct: 51 GSTASTAILI 80
>gb|CA005298.1|CA005298 HU11C04u HU Hordeum vulgare subsp. vulgare cDNA clone HU11C04
3-PRIME, mRNA sequence
Length = 567
Score = 209 bits (451), Expect(2) = 6e-056
Identities = 87/107 (81%), Positives = 95/107 (88%)
Frame = -3 / +1
Query: 775 SSQNQCGSTASTAVLVGDRLFVANVGDSRAIICREGNAIAVSKDHKPDQTDERQRIEDAG 596
S GSTASTA+LVG RL VANVGDSRA++ + G AIAVS+DHKPDQTDERQRIE+AG
Sbjct: 247 SHTRDAGSTASTAILVGGRLVVANVGDSRAVVSKGGKAIAVSRDHKPDQTDERQRIEEAG 426
Query: 595 GFVMWAGTWRVGGVLAVSRAFGDKLLKQYVVVDPEIREEVVDDTLEF 455
GFVMWAGTWRVGGVLAVSRAFGDKLLKQYVV DPEI+EEVVD +LEF
Sbjct: 427 GFVMWAGTWRVGGVLAVSRAFGDKLLKQYVVADPEIKEEVVDSSLEF 567
Score = 155 bits (332), Expect(2) = 9e-051
Identities = 68/101 (67%), Positives = 71/101 (70%)
Frame = +3 / -2
Query: 456 NXXXXXXXXXXXXXXXXXYCFKSLSPKARETASTPPTRHVPAHITKPPASSIRCRSSV*S 635
N YCFKSLSPKARETA TPPTRHVPAHITKPPASSI C SSV S
Sbjct: 566 NSSELSTTSSLISGSATTYCFKSLSPKARETARTPPTRHVPAHITKPPASSILCLSSVWS 387
Query: 636 GL*SFETAIAFPSLHMIALESPTFATKRRSPTSTAVDAVDP 758
GL*S ETAIAFP L ALESPTFAT +R PT AV+AV+P
Sbjct: 386 GL*SLETAIAFPPLETTALESPTFATTKRPPTRIAVEAVEP 264
Score = 150 bits (323), Expect = 1e-035
Identities = 58/97 (59%), Positives = 78/97 (80%)
Frame = -3 / +1
Query: 1018 ASSPGKRASMEDFYETKIDCVDGQIVGLFGVFDGHGGAKVAEYVKENLFNNLVSHPKFIS 839
AS GKRASMEDFYET++D VDG+ VGLFGVFDGHGGA+ AEYVK++LF+NL+ HPKF++
Sbjct: 1 ASCAGKRASMEDFYETRVDDVDGETVGLFGVFDGHGGARAAEYVKKHLFSNLIKHPKFMT 180
Query: 838 DTKVAIDDAYKSTDSEFLESDSSQNQCGSTASTAVLV 728
DTK AI + + TDSEFL++DSS + + ++ ++
Sbjct: 181 DTKAAIAETFNHTDSEFLKADSSHTRDAGSTASTAIL 291
Score = 110 bits (235), Expect(3) = 5e-030
Identities = 50/103 (48%), Positives = 70/103 (67%)
Frame = +2 / -1
Query: 455 KLECVINNLLSDLRIHNHILL*EFVTKSTRNSKYTTNAPCSCPHHKTSSIFNTLPLISLI 634
+ E +++LL DL + +ILL*+F+TK +RNSK TTN PC PHHK SS N+L L+ L+
Sbjct: 567 EFE*AVDHLLLDLWVSYNILL*KFITKGSRNSKNTTNTPCPSPHHKASSFLNSLSLVCLV 388
Query: 635 RLVIL*NSNSISFPAYDSPRVTNICDEETITNKYSS*CS*PTL 763
R VI N NS+ +S R+TNIC+ +T T+K S * S* ++
Sbjct: 387 RFVIPGNRNSLPSFRNNSSRITNICNHQTTTDKNSC*GS*ASI 259
Score = 66.1 bits (138), Expect(2) = 9e-051
Identities = 31/84 (36%), Positives = 46/84 (54%)
Frame = +2 / -1
Query: 767 LTTVRF*EFTVGAFISIIYSDFSITDELWMTNKIVEQVFFNILCYLSTTMTIKNSKKTNY 946
+ T+ F + +G S I E M + I E+V +I S+T+TIK +K+ N
Sbjct: 252 VATISFQKL*IGMIECFSNSSLCICHEFRMLD*IAEKVLLHIFSCSSSTVTIKYAKQPNS 73
Query: 947 LAINTINFCLIEVFHGCPFTRGAC 1018
L+IN I+ CL+E+ H CPF AC
Sbjct: 72 LSINIIHSCLVEILH*CPFPSTAC 1
Score = 31.3 bits (62), Expect(2) = 6e-056
Identities = 14/24 (58%), Positives = 16/24 (66%)
Frame = -2 / +3
Query: 1016 KLPW*KGIHGRLL*DKN*LC*WPD 945
KL W KGI+G L DK+ C*W D
Sbjct: 3 KLCWEKGINGGFLRDKSG*C*WRD 74
Score = 29.5 bits (58), Expect(3) = 5e-030
Identities = 11/19 (57%), Positives = 13/19 (68%)
Frame = +1 / -3
Query: 952 HQHNQFLSHRSLPWMPFYQ 1008
HQH+ LS R+ P MPF Q
Sbjct: 67 HQHHPLLSRRNPPLMPFSQ 11
Score = 29.5 bits (58), Expect(3) = 5e-030
Identities = 17/46 (36%), Positives = 19/46 (41%)
Frame = +3 / -2
Query: 771 LLSDSKNXXXXXXXXXXXXXXXXXMNFG*LTRLLNRFSLTYSATLA 908
LLS +N MNFG L +LL R TYSA A
Sbjct: 248 LLSAFRNSESV*LNVSAIAAFVSVMNFGCLIKLLKRCFFTYSAARA 111
>gb|BU990528.1|BU990528 HF25F03r HF Hordeum vulgare subsp. vulgare cDNA clone HF25F03
5-PRIME, mRNA sequence
Length = 583
Score = 148 bits (317), Expect(2) = 3e-055
Identities = 56/98 (57%), Positives = 77/98 (78%)
Frame = -3 / +1
Query: 1063 SGGGLSQNGRFSYGYASSPGKRASMEDFYETKIDCVDGQIVGLFGVFDGHGGAKVAEYVK 884
S G ++G+ GY+S GKRA+MEDFY+ K+ +DG V LFGVFDGHGG++ AEY+K
Sbjct: 124 SAGWQREDGKLKCGYSSFRGKRATMEDFYDVKLTEIDGHTVSLFGVFDGHGGSRAAEYLK 303
Query: 883 ENLFNNLVSHPKFISDTKVAIDDAYKSTDSEFLESDSS 770
E+LF NL+ HPKF++DTK+AI + Y+ TD++FLES+SS
Sbjct: 304 EHLFENLMKHPKFLTDTKLAISETYQKTDADFLESESS 417
Score = 88.1 bits (186), Expect(2) = 3e-055
Identities = 37/50 (74%), Positives = 44/50 (88%)
Frame = -3 / +1
Query: 757 GSTASTAVLVGDRLFVANVGDSRAIICREGNAIAVSKDHKPDQTDERQRI 608
GSTASTAVLVGD L+VANVGDSRA+I + G A A+S DHKP++TDER+RI
Sbjct: 433 GSTASTAVLVGDHLYVANVGDSRAVISKAGKARALSVDHKPNRTDERKRI 582
>gb|BU967312.1|BU967312 HB03O11r BC Hordeum vulgare subsp. vulgare cDNA clone HB03O11
5-PRIME, mRNA sequence
Length = 646
Score = 211 bits (456), Expect = 4e-054
Identities = 89/113 (78%), Positives = 101/113 (89%)
Frame = -3 / +3
Query: 610 IEDAGGFVMWAGTWRVGGVLAVSRAFGDKLLKQYVVVDPEIREEVVDDTLEFLILASDGL 431
IE+AGGFVMWAGTWRVGGVLAVSRAFGDKLLKQYVV DPEI+EEVVD +LEFLILASDGL
Sbjct: 12 IEEAGGFVMWAGTWRVGGVLAVSRAFGDKLLKQYVVADPEIKEEVVDSSLEFLILASDGL 191
Query: 430 WDVVSNEEAVAMTRSIQDPEEAAKMLLQEAYKRESSDNITCVVVHFLHGQGSS 272
WDVV+N+EAVAM + I+DPE+AAK LLQEA +R S+DNIT V+V FL G +S
Sbjct: 192 WDVVTNDEAVAMVKPIEDPEQAAKGLLQEASRRGSADNITVVIVRFLDGTTTS 350
Score = 154 bits (330), Expect = 1e-036
Identities = 72/109 (66%), Positives = 75/109 (68%)
Frame = +3 / -1
Query: 285 PCKKCTTTQVMLSLLSLLYASCKSIFAASSGS*MDLVIATASSLETTSHSPSLARIRNXX 464
P KK T T VMLS L L AS S FAA SGS + L +ATASSL TTSHSPSLAR+RN
Sbjct: 337 PSKKRTMTTVMLSALPLREAS*SSPFAACSGSSIGLTMATASSLVTTSHSPSLARMRNSS 158
Query: 465 XXXXXXXXXXXXXXXYCFKSLSPKARETASTPPTRHVPAHITKPPASSI 611
YCFKSLSPKARETA TPPTRHVPAHITKPPASSI
Sbjct: 157 ELSTTSSLISGSATTYCFKSLSPKARETARTPPTRHVPAHITKPPASSI 11
Score = 114 bits (243), Expect = 1e-024
Identities = 49/109 (44%), Positives = 71/109 (65%)
Frame = +2 / -3
Query: 287 MQEVHDDASYVVTALPLVRLLQEHLCSLFWVLNGSSHRDSFLVRDHIPQPITCKDKKLEC 466
+QE ++D VV+ P L+ L L W+L H +SF+V +IPQP+T +D++ E
Sbjct: 335 VQEANNDDGDVVSTAPSGSFLK*SLRCLLWILYWLDHGNSFIVSYNIPQPVTSEDEEFE* 156
Query: 467 VINNLLSDLRIHNHILL*EFVTKSTRNSKYTTNAPCSCPHHKTSSIFNT 613
+++LL DL + +ILL*+F+TK +RNSK TTN PC PHHK SS N+
Sbjct: 155 AVDHLLLDLWVSYNILL*KFITKGSRNSKNTTNTPCPSPHHKASSFLNS 9
>gb|BU973214.1|BU973214 HB24C10r BC Hordeum vulgare subsp. vulgare cDNA clone HB24C10
5-PRIME, mRNA sequence
Length = 570
Score = 182 bits (391), Expect(2) = 4e-053
Identities = 75/81 (92%), Positives = 79/81 (97%)
Frame = -3 / +3
Query: 757 GSTASTAVLVGDRLFVANVGDSRAIICREGNAIAVSKDHKPDQTDERQRIEDAGGFVMWA 578
GSTASTA+LVGDRL VANVGDSRA+ICR G+AIAVS+DHKPDQTDERQRIEDAGGFVMWA
Sbjct: 327 GSTASTAILVGDRLVVANVGDSRAVICRGGDAIAVSRDHKPDQTDERQRIEDAGGFVMWA 506
Query: 577 GTWRVGGVLAVSRAFGDKLLK 515
GTWRVGGVLAVSRAFGDKLLK
Sbjct: 507 GTWRVGGVLAVSRAFGDKLLK 569
Score = 177 bits (382), Expect(2) = 9e-047
Identities = 68/113 (60%), Positives = 92/113 (81%)
Frame = -3 / +3
Query: 1066 VSGGGLSQNGRFSYGYASSPGKRASMEDFYETKIDCVDGQIVGLFGVFDGHGGAKVAEYV 887
VSGGG S+NG+FSYGYAS GKR+SMEDF+ET+ID VDG+ VGLFGVFDGHGGA+ AE+V
Sbjct: 15 VSGGGFSENGKFSYGYASCLGKRSSMEDFHETRIDGVDGETVGLFGVFDGHGGARAAEFV 194
Query: 886 KENLFNNLVSHPKFISDTKVAIDDAYKSTDSEFLESDSSQNQCGSTASTAVLV 728
K+NLF+NL+ HPKF +DTK AI + + TDSE L++D++ N+ + ++ ++
Sbjct: 195 KQNLFSNLIKHPKFFTDTKSAIAETFTHTDSELLKADTAHNRDAGSTASTAIL 353
Score = 144 bits (309), Expect(2) = 2e-049
Identities = 64/81 (79%), Positives = 67/81 (82%)
Frame = +3 / -3
Query: 516 FKSLSPKARETASTPPTRHVPAHITKPPASSIRCRSSV*SGL*SFETAIAFPSLHMIALE 695
F SLSP ARETASTPPTRHVPAH+TKPPASSI C SSV SGL S +TAIA P L M ALE
Sbjct: 568 FNSLSPNARETASTPPTRHVPAHMTKPPASSILCLSSVWSGLWSLDTAIASPPLQMTALE 389
Query: 696 SPTFATKRRSPTSTAVDAVDP 758
SPTFAT RRSPT AV+AVDP
Sbjct: 388 SPTFATTRRSPTRMAVEAVDP 326
Score = 82.2 bits (173), Expect(2) = 4e-022
Identities = 31/71 (43%), Positives = 45/71 (63%)
Frame = +2 / -2
Query: 521 EFVTKSTRNSKYTTNAPCSCPHHKTSSIFNTLPLISLIRLVIL*NSNSISFPAYDSPRVT 700
+FVTK +RN K+ PC+CPH + S I LPL+ L+RL++ *+ SI+ D P +
Sbjct: 563 QFVTKRSRNGKHAAYTPCTCPHDEASGILYPLPLVCLVRLMVP*HRYSITTSTNDGPGIP 384
Query: 701 NICDEETITNK 733
N+C + ITNK
Sbjct: 383 NVCHHQAITNK 351
Score = 72.5 bits (152), Expect(2) = 2e-049
Identities = 34/81 (41%), Positives = 51/81 (62%)
Frame = +2 / -2
Query: 824 SDFSITDELWMTNKIVEQVFFNILCYLSTTMTIKNSKKTNYLAINTINFCLIEVFHGCPF 1003
S I +ELW+ + + E+V + L S+TM ++N+++ + L+I+ I+ CL+EV HG F
Sbjct: 257 SRLGIGEELWVLD*VAEKVLLDELRRSSSTMAVENTEQPDGLSIDAIDSCLVEVLHGRSF 78
Query: 1004 TRGACIAIAKSTILAEAAAAD 1066
A I IAK TIL E AA D
Sbjct: 77 P*AARITIAKLTILTEPAATD 15
Score = 46.9 bits (96), Expect(2) = 4e-053
Identities = 30/77 (38%), Positives = 36/77 (46%)
Frame = -1 / +1
Query: 1065 SAAAASARMVDLAMAMQAPLVKGHPWKTSMRQKLIVLMARXXXXXXXXXXXXXLR*QSML 886
S AA S RMV LAM M+A K PW+TS RQ+ + M R L +S
Sbjct: 16 SVAAGSVRMVSLAMVMRAA*GKDLPWRTSTRQESMASMERPSGCSVFSTAMVELERRSSS 195
Query: 885 KKTCSTILLVIQSSSVI 835
+T S QSSS I
Sbjct: 196 SRTFSAT*SSTQSSSPI 246
Score = 42.8 bits (87), Expect(2) = 4e-022
Identities = 24/50 (48%), Positives = 27/50 (54%)
Frame = +3 / -3
Query: 846 NFG*LTRLLNRFSLTYSATLAXXXXXXXXXXXXIWPSTQSIFVS*KSSMD 995
NFG L +LL RF LT SA A + PST SI VS KSSM+
Sbjct: 235 NFGCLIKLLKRFCLTNSAARAPPWPSKTPNSPTVSPSTPSILVSWKSSME 86
Score = 29.9 bits (59), Expect(2) = 9e-047
Identities = 22/56 (39%), Positives = 25/56 (44%)
Frame = -2 / +2
Query: 734 TCW*SSLRRKCW*L*GYHMQGRKCYCCFKGSQA*SN**AAAY*RCWRFCDVGRNMA 567
+CW*S K W G H+ CY KG A* + A C R VGR MA
Sbjct: 350 SCW*SPGGGKRWGFQGRHL*RW*CYSGVKGP*A*PDRREAEDRGCRRLRHVGRYMA 517
>gb|BQ464213.1|BQ464213 HF01K13T HF Hordeum vulgare subsp. vulgare cDNA clone HF01K13
5-PRIME, mRNA sequence
Length = 551
Score = 182 bits (393), Expect(2) = 9e-050
Identities = 76/93 (81%), Positives = 82/93 (88%)
Frame = -3 / +3
Query: 775 SSQNQCGSTASTAVLVGDRLFVANVGDSRAIICREGNAIAVSKDHKPDQTDERQRIEDAG 596
S GSTASTA+LVG RL VANVGDSRA++ + G AIAVS+DHKPDQTDERQRIE+AG
Sbjct: 273 SHTRDAGSTASTAILVGGRLVVANVGDSRAVVSKGGKAIAVSRDHKPDQTDERQRIEEAG 452
Query: 595 GFVMWAGTWRVGGVLAVSRAFGDKLLKQYVVVD 497
GFVMWAGTWRVGGVLAVSRAFGDKLLKQYVV D
Sbjct: 453 GFVMWAGTWRVGGVLAVSRAFGDKLLKQYVVAD 551
Score = 167 bits (360), Expect = 8e-041
Identities = 64/104 (61%), Positives = 85/104 (81%)
Frame = -3 / +3
Query: 1039 GRFSYGYASSPGKRASMEDFYETKIDCVDGQIVGLFGVFDGHGGAKVAEYVKENLFNNLV 860
GRFSYG+AS GKRASMEDFYET++D VDG+ VGLFGVFDGHGGA+ AEYVK++LF+NL+
Sbjct: 6 GRFSYGFASCAGKRASMEDFYETRVDDVDGETVGLFGVFDGHGGARAAEYVKKHLFSNLI 185
Query: 859 SHPKFISDTKVAIDDAYKSTDSEFLESDSSQNQCGSTASTAVLV 728
HPKF++DTK AI + + TDSEFL++DSS + + ++ ++
Sbjct: 186 KHPKFMTDTKAAIAETFNHTDSEFLKADSSHTRDAGSTASTAIL 317
Score = 154 bits (331), Expect(2) = 9e-051
Identities = 67/83 (80%), Positives = 70/83 (84%)
Frame = +3 / -2
Query: 510 YCFKSLSPKARETASTPPTRHVPAHITKPPASSIRCRSSV*SGL*SFETAIAFPSLHMIA 689
YCFKSLSPKARETA TPPTRHVPAHITKPPASSI C SSV SGL*S ETAIAFP L A
Sbjct: 538 YCFKSLSPKARETARTPPTRHVPAHITKPPASSILCLSSVWSGL*SLETAIAFPPLETTA 359
Query: 690 LESPTFATKRRSPTSTAVDAVDP 758
LESPTFAT +R PT AV+AV+P
Sbjct: 358 LESPTFATTKRPPTRIAVEAVEP 290
Score = 101 bits (215), Expect(3) = 2e-027
Identities = 45/86 (52%), Positives = 60/86 (69%)
Frame = +2 / -1
Query: 506 HILL*EFVTKSTRNSKYTTNAPCSCPHHKTSSIFNTLPLISLIRLVIL*NSNSISFPAYD 685
+ILL*+F+TK +RNSK TTN PC PHHK SS N+L L+ L+R VI N NS+ +
Sbjct: 542 NILL*KFITKGSRNSKNTTNTPCPSPHHKASSFLNSLSLVCLVRFVIPGNRNSLPSFRNN 363
Query: 686 SPRVTNICDEETITNKYSS*CS*PTL 763
S R+TNIC+ +T T+K S * S* ++
Sbjct: 362 SSRITNICNHQTTTDKNSC*GS*ASI 285
Score = 66.6 bits (139), Expect(2) = 9e-051
Identities = 32/89 (35%), Positives = 48/89 (53%)
Frame = +2 / -1
Query: 767 LTTVRF*EFTVGAFISIIYSDFSITDELWMTNKIVEQVFFNILCYLSTTMTIKNSKKTNY 946
+ T+ F + +G S I E M + I E+V +I S+T+TIK +K+ N
Sbjct: 278 VATISFQKL*IGMIECFSNSSLCICHEFRMLD*IAEKVLLHIFSCSSSTVTIKYAKQPNS 99
Query: 947 LAINTINFCLIEVFHGCPFTRGACIAIAK 1033
L+IN I+ CL+E+ H CPF AC I +
Sbjct: 98 LSINIIHSCLVEILH*CPFPSTACEPITE 12
Score = 37.3 bits (75), Expect(2) = 9e-050
Identities = 16/28 (57%), Positives = 19/28 (67%)
Frame = -2 / +2
Query: 1028 LWLCKLPW*KGIHGRLL*DKN*LC*WPD 945
LW+ KL W KGI+G L DK+ C*W D
Sbjct: 17 LWVRKLCWEKGINGGFLRDKSG*C*WRD 100
Score = 29.5 bits (58), Expect(3) = 2e-027
Identities = 11/19 (57%), Positives = 13/19 (68%)
Frame = +1 / -3
Query: 952 HQHNQFLSHRSLPWMPFYQ 1008
HQH+ LS R+ P MPF Q
Sbjct: 93 HQHHPLLSRRNPPLMPFSQ 37
Score = 29.5 bits (58), Expect(3) = 2e-027
Identities = 17/46 (36%), Positives = 19/46 (41%)
Frame = +3 / -2
Query: 771 LLSDSKNXXXXXXXXXXXXXXXXXMNFG*LTRLLNRFSLTYSATLA 908
LLS +N MNFG L +LL R TYSA A
Sbjct: 274 LLSAFRNSESV*LNVSAIAAFVSVMNFGCLIKLLKRCFFTYSAARA 137
>gb|BJ466264.1|BJ466264 BJ466264 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags31g06 3', mRNA sequence
Length = 604
Score = 173 bits (372), Expect(2) = 1e-047
Identities = 70/110 (63%), Positives = 90/110 (81%)
Frame = -3 / -2
Query: 616 QRIEDAGGFVMWAGTWRVGGVLAVSRAFGDKLLKQYVVVDPEIREEVVDDTLEFLILASD 437
+RIE+AGG V+WAGTWRVGGVLA+SRAFG++LLK +VV +PEI+EE+V+ LE L+LASD
Sbjct: 531 KRIENAGGVVIWAGTWRVGGVLAMSRAFGNRLLKPFVVAEPEIQEELVNGELESLVLASD 352
Query: 436 GLWDVVSNEEAVAMTRSIQDPEEAAKMLLQEAYKRESSDNITCVVVHFLH 287
GLWD V NEEAV++ ++ PE AA+ L + AY R S+DNITC+VV F H
Sbjct: 351 GLWDAVENEEAVSLAKTEDVPESAARKLTEIAYSRGSADNITCIVVQFHH 202
Score = 37.3 bits (75), Expect(2) = 1e-047
Identities = 14/25 (56%), Positives = 20/25 (80%)
Frame = -3 / -1
Query: 688 AIICREGNAIAVSKDHKPDQTDERQ 614
A+I + G A A+S DHKP++TDER+
Sbjct: 604 AVISKAGKARALSVDHKPNRTDERK 530
>gb|BQ464228.1|BQ464228 HF01L04T HF Hordeum vulgare subsp. vulgare cDNA clone HF01L04
5-PRIME, mRNA sequence
Length = 468
Score = 190 bits (409), Expect = 1e-047
Identities = 76/117 (64%), Positives = 98/117 (83%)
Frame = -3 / +2
Query: 643 HKPDQTDERQRIEDAGGFVMWAGTWRVGGVLAVSRAFGDKLLKQYVVVDPEIREEVVDDT 464
HKPD++DER+RIE+AGG V ++GTWRVGGVLA+SRAFGD+LLK++VV +PEI+E+ +DD
Sbjct: 11 HKPDRSDERERIENAGGVVTFSGTWRVGGVLAMSRAFGDRLLKRFVVAEPEIQEQEIDDE 190
Query: 463 LEFLILASDGLWDVVSNEEAVAMTRSIQDPEEAAKMLLQEAYKRESSDNITCVVVHF 293
LE+LILASDGLWDVVSNE AVA + PE AA+ L + A+ R S+DNITC+V+ F
Sbjct: 191 LEYLILASDGLWDVVSNEHAVAFVKGEVCPEAAARKLTEIAFARGSTDNITCIVIEF 361
>gb|BI957523.1|BI957523 HVSMEn0009P18f Hordeum vulgare rachis EST library HVcDNA0015 (normal)
Hordeum vulgare subsp. vulgare cDNA clone HVSMEn0009P18f,
mRNA sequence
Length = 679
Score = 181 bits (390), Expect(2) = 3e-047
Identities = 69/115 (60%), Positives = 93/115 (80%)
Frame = -3 / +2
Query: 1072 SSVSGGGLSQNGRFSYGYASSPGKRASMEDFYETKIDCVDGQIVGLFGVFDGHGGAKVAE 893
S +GGG+S+ GRFSYG+AS GKRASMEDFYET++D VDG+ VGLFGVFDGHGGA+ AE
Sbjct: 179 SPATGGGISEKGRFSYGFASCAGKRASMEDFYETRVDDVDGETVGLFGVFDGHGGARAAE 358
Query: 892 YVKENLFNNLVSHPKFISDTKVAIDDAYKSTDSEFLESDSSQNQCGSTASTAVLV 728
YVK++LF+NL+ HPKF++DTK AI + + TDSEFL++DSS + + ++ ++
Sbjct: 359 YVKKHLFSNLIKHPKFMTDTKAAIAETFNHTDSEFLKADSSHTRDAGSTASTAIL 523
Score = 68.9 bits (144), Expect(2) = 5e-021
Identities = 33/98 (33%), Positives = 51/98 (52%)
Frame = +2 / -1
Query: 767 LTTVRF*EFTVGAFISIIYSDFSITDELWMTNKIVEQVFFNILCYLSTTMTIKNSKKTNY 946
+ T+ F + +G S I E M + I E+V +I S+T+TIK +K+ N
Sbjct: 484 VATISFQKL*IGMIECFSNSSLCICHEFRMLD*IAEKVLLHIFSCSSSTVTIKYAKQPNS 305
Query: 947 LAINTINFCLIEVFHGCPFTRGACIAIAKSTILAEAAA 1060
L+IN I+ CL+E+ H CPF AC I + + A+
Sbjct: 304 LSINIIHSCLVEILH*CPFPSTACEPITEPAFFTDPAS 191
Score = 52.4 bits (108), Expect(2) = 5e-021
Identities = 24/38 (63%), Positives = 27/38 (71%)
Frame = +3 / -2
Query: 645 SFETAIAFPSLHMIALESPTFATKRRSPTSTAVDAVDP 758
S ETAIAF ALESPTFAT +R PT AV+AV+P
Sbjct: 609 SLETAIAFLP*ETTALESPTFATTKRPPTRIAVEAVEP 496
Score = 27.6 bits (54), Expect(2) = 3e-047
Identities = 9/25 (36%), Positives = 15/25 (60%)
Frame = -3 / +3
Query: 685 IICREGNAIAVSKDHKPDQTDERQR 611
+ +EG + ++ KPDQTD R +
Sbjct: 570 LFLKEGKLLPFPRNTKPDQTDHRHK 644
>gb|CA001846.1|CA001846 HS05M05r HS Hordeum vulgare subsp. vulgare cDNA clone HS05M05
5-PRIME, mRNA sequence
Length = 612
Score = 177 bits (382), Expect(2) = 9e-047
Identities = 68/113 (60%), Positives = 92/113 (81%)
Frame = -3 / +2
Query: 1066 VSGGGLSQNGRFSYGYASSPGKRASMEDFYETKIDCVDGQIVGLFGVFDGHGGAKVAEYV 887
VSGGG S+NG+FSYGYAS GKR+SMEDF+ET+ID VDG+ VGLFGVFDGHGGA+ AE+V
Sbjct: 107 VSGGGFSENGKFSYGYASCLGKRSSMEDFHETRIDGVDGETVGLFGVFDGHGGARAAEFV 286
Query: 886 KENLFNNLVSHPKFISDTKVAIDDAYKSTDSEFLESDSSQNQCGSTASTAVLV 728
K+NLF+NL+ HPKF +DTK AI + + TDSE L++D++ N+ + ++ ++
Sbjct: 287 KQNLFSNLIKHPKFFTDTKSAIAETFTHTDSELLKADTAHNRDAGSTASTAIL 445
Score = 144 bits (310), Expect(2) = 5e-042
Identities = 58/64 (90%), Positives = 62/64 (96%)
Frame = -3 / +2
Query: 757 GSTASTAVLVGDRLFVANVGDSRAIICREGNAIAVSKDHKPDQTDERQRIEDAGGFVMWA 578
GSTASTA+LVGDRL VANVGDSRA+ICR G+AIAVS+DHKPDQTDERQRIEDAGGFVMWA
Sbjct: 419 GSTASTAILVGDRLVVANVGDSRAVICRGGDAIAVSRDHKPDQTDERQRIEDAGGFVMWA 598
Query: 577 GTWR 566
GTWR
Sbjct: 599 GTWR 610
Score = 111 bits (238), Expect(2) = 8e-040
Identities = 50/65 (76%), Positives = 53/65 (81%)
Frame = +3 / -1
Query: 564 TRHVPAHITKPPASSIRCRSSV*SGL*SFETAIAFPSLHMIALESPTFATKRRSPTSTAV 743
TRHVPAH+TKPPASSI C SSV SGL S +TAIA P L M ALESPTFAT RRSPT AV
Sbjct: 612 TRHVPAHMTKPPASSILCLSSVWSGLWSLDTAIASPPLQMTALESPTFATTRRSPTRMAV 433
Query: 744 DAVDP 758
+AVDP
Sbjct: 432 EAVDP 418
Score = 72.5 bits (152), Expect(2) = 8e-040
Identities = 34/81 (41%), Positives = 51/81 (62%)
Frame = +2 / -3
Query: 824 SDFSITDELWMTNKIVEQVFFNILCYLSTTMTIKNSKKTNYLAINTINFCLIEVFHGCPF 1003
S I +ELW+ + + E+V + L S+TM ++N+++ + L+I+ I+ CL+EV HG F
Sbjct: 349 SRLGIGEELWVLD*VAEKVLLDELRRSSSTMAVENTEQPDGLSIDAIDSCLVEVLHGRSF 170
Query: 1004 TRGACIAIAKSTILAEAAAAD 1066
A I IAK TIL E AA D
Sbjct: 169 P*AARITIAKLTILTEPAATD 107
Score = 46.9 bits (96), Expect(2) = 5e-042
Identities = 30/77 (38%), Positives = 36/77 (46%)
Frame = -1 / +3
Query: 1065 SAAAASARMVDLAMAMQAPLVKGHPWKTSMRQKLIVLMARXXXXXXXXXXXXXLR*QSML 886
S AA S RMV LAM M+A K PW+TS RQ+ + M R L +S
Sbjct: 108 SVAAGSVRMVSLAMVMRAA*GKDLPWRTSTRQESMASMERPSGCSVFSTAMVELERRSSS 287
Query: 885 KKTCSTILLVIQSSSVI 835
+T S QSSS I
Sbjct: 288 SRTFSAT*SSTQSSSPI 338
Score = 29.9 bits (59), Expect(2) = 9e-047
Identities = 22/56 (39%), Positives = 25/56 (44%)
Frame = -2 / +1
Query: 734 TCW*SSLRRKCW*L*GYHMQGRKCYCCFKGSQA*SN**AAAY*RCWRFCDVGRNMA 567
+CW*S K W G H+ CY KG A* + A C R VGR MA
Sbjct: 442 SCW*SPGGGKRWGFQGRHL*RW*CYSGVKGP*A*PDRREAEDRGCRRLRHVGRYMA 609
>gb|CV056271.1|CV056271 BNEL15H10 Barley EST endosperm library Hordeum vulgare subsp. vulgare
cDNA clone BNEL15H10 5' similar to protein phosphatase
2C, mRNA sequence
Length = 583
Score = 177 bits (382), Expect(2) = 9e-047
Identities = 68/113 (60%), Positives = 92/113 (81%)
Frame = -3 / +1
Query: 1066 VSGGGLSQNGRFSYGYASSPGKRASMEDFYETKIDCVDGQIVGLFGVFDGHGGAKVAEYV 887
VSGGG S+NG+FSYGYAS GKR+SMEDF+ET+ID VDG+ VGLFGVFDGHGGA+ AE+V
Sbjct: 58 VSGGGFSENGKFSYGYASCLGKRSSMEDFHETRIDGVDGETVGLFGVFDGHGGARAAEFV 237
Query: 886 KENLFNNLVSHPKFISDTKVAIDDAYKSTDSEFLESDSSQNQCGSTASTAVLV 728
K+NLF+NL+ HPKF +DTK AI + + TDSE L++D++ N+ + ++ ++
Sbjct: 238 KQNLFSNLIKHPKFFTDTKSAIAETFTHTDSELLKADTAHNRDAGSTASTAIL 396
Score = 159 bits (342), Expect(2) = 2e-045
Identities = 65/71 (91%), Positives = 69/71 (97%)
Frame = -3 / +1
Query: 757 GSTASTAVLVGDRLFVANVGDSRAIICREGNAIAVSKDHKPDQTDERQRIEDAGGFVMWA 578
GSTASTA+LVGDRL VANVGDSRA+ICR G+AIAVS+DHKPDQTDERQRIEDAGGFVMWA
Sbjct: 370 GSTASTAILVGDRLVVANVGDSRAVICRGGDAIAVSRDHKPDQTDERQRIEDAGGFVMWA 549
Query: 577 GTWRVGGVLAV 545
GTWRVGGVLAV
Sbjct: 550 GTWRVGGVLAV 582
Score = 126 bits (270), Expect(2) = 7e-045
Identities = 56/71 (78%), Positives = 59/71 (83%)
Frame = +3 / -3
Query: 546 TASTPPTRHVPAHITKPPASSIRCRSSV*SGL*SFETAIAFPSLHMIALESPTFATKRRS 725
TASTPPTRHVPAH+TKPPASSI C SSV SGL S +TAIA P L M ALESPTFAT RRS
Sbjct: 581 TASTPPTRHVPAHMTKPPASSILCLSSVWSGLWSLDTAIASPPLQMTALESPTFATTRRS 402
Query: 726 PTSTAVDAVDP 758
PT AV+AVDP
Sbjct: 401 PTRMAVEAVDP 369
Score = 74.8 bits (157), Expect(2) = 7e-045
Identities = 35/81 (43%), Positives = 51/81 (62%)
Frame = +2 / -2
Query: 824 SDFSITDELWMTNKIVEQVFFNILCYLSTTMTIKNSKKTNYLAINTINFCLIEVFHGCPF 1003
S I +ELW+ + + E+V + L S+TM ++N+++ N L+I+ I+ CL+EV HG F
Sbjct: 300 SRLGIGEELWVLD*VAEKVLLDELRRSSSTMAVENTEQPNGLSIDAIDSCLVEVLHGRSF 121
Query: 1004 TRGACIAIAKSTILAEAAAAD 1066
A I IAK TIL E AA D
Sbjct: 120 P*AARITIAKLTILTEPAATD 58
Score = 46.0 bits (94), Expect(2) = 2e-045
Identities = 23/40 (57%), Positives = 25/40 (62%)
Frame = -2 / +3
Query: 1064 QRRRPQPEW*I*LWLCKLPW*KGIHGRLL*DKN*LC*WPD 945
Q RR Q EW*+*LWLC+LP K HG L DKN W D
Sbjct: 60 QWRRVQ*EW*V*LWLCELPREKIFHGGLPRDKNRWRRWRD 179
Score = 29.9 bits (59), Expect(2) = 9e-047
Identities = 22/56 (39%), Positives = 25/56 (44%)
Frame = -2 / +3
Query: 734 TCW*SSLRRKCW*L*GYHMQGRKCYCCFKGSQA*SN**AAAY*RCWRFCDVGRNMA 567
+CW*S K W G H+ CY KG A* + A C R VGR MA
Sbjct: 393 SCW*SPGGGKRWGFQGRHL*RW*CYSGVKGP*A*PDRREAEDRGCRRLRHVGRYMA 560
>gb|CA001021.1|CA001021 HS05M05u HS Hordeum vulgare subsp. vulgare cDNA clone HS05M05
3-PRIME, mRNA sequence
Length = 515
Score = 187 bits (403), Expect = 9e-047
Identities = 80/102 (78%), Positives = 88/102 (86%)
Frame = -3 / -2
Query: 586 MWAGTWRVGGVLAVSRAFGDKLLKQYVVVDPEIREEVVDDTLEFLILASDGLWDVVSNEE 407
MWAGTWRVGGVL VSRAFGDKLLKQYVV DPEI+EEVVD +LEFLILASDGLWDVV+NEE
Sbjct: 514 MWAGTWRVGGVLPVSRAFGDKLLKQYVVADPEIKEEVVDSSLEFLILASDGLWDVVTNEE 335
Query: 406 AVAMTRSIQDPEEAAKMLLQEAYKRESSDNITCVVVHFLHGQ 281
AVAM + I D ++AAK LL EA +R S+DNITCVVV FL Q
Sbjct: 334 AVAMVKPIVDSQQAAKKLLVEATRRGSADNITCVVVRFLDQQ 209
Score = 126 bits (270), Expect = 2e-028
Identities = 58/102 (56%), Positives = 64/102 (62%)
Frame = +3 / +3
Query: 282 CPCKKCTTTQVMLSLLSLLYASCKSIFAASSGS*MDLVIATASSLETTSHSPSLARIRNX 461
C +K TTTQVMLS L L AS +S AA S + +ATASSL TTSHSPSLAR+RN
Sbjct: 210 CWSRKRTTTQVMLSALPLRVASTRSFLAACCESTIGFTMATASSLVTTSHSPSLARMRNS 389
Query: 462 XXXXXXXXXXXXXXXXYCFKSLSPKARETASTPPTRHVPAHI 587
YCF SLSP ARET STPPTRHVPAH+
Sbjct: 390 RELSTTSSLISGSATTYCFNSLSPNARETGSTPPTRHVPAHM 515
>gb|CB881152.1|CB881152 HM08O20w HM Hordeum vulgare subsp. vulgare cDNA clone HM08O20
3-PRIME, mRNA sequence
Length = 630
Score = 186 bits (401), Expect = 2e-046
Identities = 83/101 (82%), Positives = 88/101 (87%)
Frame = -3 / -2
Query: 523 LLKQYVVVDPEIREEVVDDTLEFLILASDGLWDVVSNEEAVAMTRSIQDPEEAAKMLLQE 344
LLKQYVVVDPEIREE+VD++LEFLILASDGLWDVVSNEEAV MTRSIQDPEEAAK LLQE
Sbjct: 629 LLKQYVVVDPEIREEIVDESLEFLILASDGLWDVVSNEEAVDMTRSIQDPEEAAKRLLQE 450
Query: 343 AYKRESSDNITCVVVHFLHGQGSSGYA*SVAVKLFYAVVCS 221
AYKRESSDNITCVVV F HGQGSSG A*S L + C+
Sbjct: 449 AYKRESSDNITCVVVRFFHGQGSSGPA*SRCEALLTSGRCT 327
Score = 126 bits (270), Expect = 2e-028
Identities = 57/88 (64%), Positives = 65/88 (73%)
Frame = +2 / +3
Query: 257 ALSVSAATLPMQEVHDDASYVVTALPLVRLLQEHLCSLFWVLNGSSHRDSFLVRDHIPQP 436
ALS A L M+E H+DA YVVTALPLV LLQE L S WVL G H DS LVRDHIP+
Sbjct: 363 ALSRPATPLTMEEAHNDAGYVVTALPLVGLLQEPLRSFLWVLYGPGHVDSLLVRDHIPKS 542
Query: 437 ITCKDKKLECVINNLLSDLRIHNHILL* 520
I CKD+KL+ +IN+ L DL IHN+ILL*
Sbjct: 543 IACKDEKLQGLINDFLPDLWIHNYILL* 626
Score = 120 bits (257), Expect = 1e-026
Identities = 53/80 (66%), Positives = 57/80 (71%)
Frame = +1 / +2
Query: 280 LAHARSARRRKLCCHCSPSCTPLARASLQPLLGPEWI*SSRQLPR*RPHPTAHHLQG*ET 459
L H RSA+RR+LCCHCSP+C P ARAS Q LG W S RQ PR*RPHP H LQG*ET
Sbjct: 386 LDHGRSAQRRRLCCHCSPACRPPARASSQLPLGLVWTGSCRQPPR*RPHPKVHRLQG*ET 565
Query: 460 RVCHQQPPLGSPDPQPHIAL 519
HQ+ P GS DPQ HIAL
Sbjct: 566 PGTHQRFPPGSLDPQLHIAL 625
Score = 119 bits (254), Expect = 3e-026
Identities = 58/89 (65%), Positives = 62/89 (69%)
Frame = +3 / +1
Query: 258 L*AYPLLPCPCKKCTTTQVMLSLLSLLYASCKSIFAASSGS*MDLVIATASSLETTSHSP 437
L*A PLLP P KK TTTQVMLSLLS L ASCKS+FAASSGS MD V++TASSLETTS SP
Sbjct: 364 L*AGPLLP*PWKKRTTTQVMLSLLSRL*ASCKSLFAASSGSCMDRVMSTASSLETTSQSP 543
Query: 438 SLARIRNXXXXXXXXXXXXXXXXXYCFKS 524
SLAR+RN YCF S
Sbjct: 544 SLARMRNSRDSSTISSRISGSTTTYCFNS 630
Score = 111 bits (237), Expect = 7e-024
Identities = 54/88 (61%), Positives = 64/88 (72%)
Frame = -1 / -3
Query: 519 *SNMWLWIRRSERRLLMTHSSFLSLQVMGCGMWSLTRKLSR*LDPFRTQKRLQRCSCKRR 340
*SNM LWI+RS R+ LM+ SF SLQ M GMWSLTR+LS * P++TQ++L+R SC+R
Sbjct: 625 *SNM*LWIQRSGRKSLMSPWSFSSLQAMDFGMWSLTRRLST*PGPYKTQRKLRRGSCRRP 446
Query: 339 TRGRAVTT*LASSCTSCMGKVAADTLKA 256
T GRAVTT* AS C S M K A LKA
Sbjct: 445 TSGRAVTT*PASLCASSMVKGVAGLLKA 362
Score = 108 bits (231), Expect = 5e-023
Identities = 44/70 (62%), Positives = 52/70 (74%)
Frame = -2 / -1
Query: 521 LKAICGCGSGDPRGGC**HTRVSYPCK*WAVGCGL*RGSCRDD*IHSGPRRGCKDALARG 342
+KAIC CGS DP G ** VS+PCK W +GCGL*RG CR D +H+ PR C++ALA G
Sbjct: 627 IKAICSCGSRDPGGNR**VPGVSHPCKRWTLGCGL*RGGCRHDPVHTRPRGSCEEALAGG 448
Query: 341 VQEGEQ*QHN 312
+Q GEQ*QHN
Sbjct: 447 LQAGEQ*QHN 418
>gb|CA013229.1|CA013229 HT07M09r HT Hordeum vulgare subsp. vulgare cDNA clone HT07M09
5-PRIME, mRNA sequence
Length = 660
Score = 177 bits (382), Expect(2) = 8e-046
Identities = 68/113 (60%), Positives = 92/113 (81%)
Frame = -3 / +1
Query: 1066 VSGGGLSQNGRFSYGYASSPGKRASMEDFYETKIDCVDGQIVGLFGVFDGHGGAKVAEYV 887
VSGGG S+NG+FSYGYAS GKR+SMEDF+ET+ID VDG+ VGLFGVFDGHGGA+ AE+V
Sbjct: 166 VSGGGFSENGKFSYGYASCLGKRSSMEDFHETRIDGVDGETVGLFGVFDGHGGARAAEFV 345
Query: 886 KENLFNNLVSHPKFISDTKVAIDDAYKSTDSEFLESDSSQNQCGSTASTAVLV 728
K+NLF+NL+ HPKF +DTK AI + + TDSE L++D++ N+ + ++ ++
Sbjct: 346 KQNLFSNLIKHPKFFTDTKSAIAETFTHTDSELLKADTAHNRDAGSTASTAIL 504
Score = 135 bits (289), Expect(2) = 4e-039
Identities = 55/61 (90%), Positives = 59/61 (96%)
Frame = -3 / +1
Query: 757 GSTASTAVLVGDRLFVANVGDSRAIICREGNAIAVSKDHKPDQTDERQRIEDAGGFVMWA 578
GSTASTA+LVGDRL VANVGDSRA+ICR G+AIAVS+DHKPDQTDERQRIEDAGGFVMWA
Sbjct: 478 GSTASTAILVGDRLVVANVGDSRAVICRGGDAIAVSRDHKPDQTDERQRIEDAGGFVMWA 657
Query: 577 G 575
G
Sbjct: 658 G 660
Score = 101 bits (216), Expect(2) = 8e-037
Identities = 46/61 (75%), Positives = 49/61 (80%)
Frame = +3 / -2
Query: 576 PAHITKPPASSIRCRSSV*SGL*SFETAIAFPSLHMIALESPTFATKRRSPTSTAVDAVD 755
PAH+TKPPASSI C SSV SGL S +TAIA P L M ALESPTFAT RRSPT AV+AVD
Sbjct: 659 PAHMTKPPASSILCLSSVWSGLWSLDTAIASPPLQMTALESPTFATTRRSPTRMAVEAVD 480
Query: 756 P 758
P
Sbjct: 479 P 477
Score = 72.5 bits (152), Expect(2) = 8e-037
Identities = 34/81 (41%), Positives = 51/81 (62%)
Frame = +2 / -1
Query: 824 SDFSITDELWMTNKIVEQVFFNILCYLSTTMTIKNSKKTNYLAINTINFCLIEVFHGCPF 1003
S I +ELW+ + + E+V + L S+TM ++N+++ + L+I+ I+ CL+EV HG F
Sbjct: 408 SRLGIGEELWVLD*VAEKVLLDELRRSSSTMAVENTEQPDGLSIDAIDSCLVEVLHGRSF 229
Query: 1004 TRGACIAIAKSTILAEAAAAD 1066
A I IAK TIL E AA D
Sbjct: 228 P*AARITIAKLTILTEPAATD 166
Score = 46.9 bits (96), Expect(2) = 4e-039
Identities = 30/77 (38%), Positives = 36/77 (46%)
Frame = -1 / +2
Query: 1065 SAAAASARMVDLAMAMQAPLVKGHPWKTSMRQKLIVLMARXXXXXXXXXXXXXLR*QSML 886
S AA S RMV LAM M+A K PW+TS RQ+ + M R L +S
Sbjct: 167 SVAAGSVRMVSLAMVMRAA*GKDLPWRTSTRQESMASMERPSGCSVFSTAMVELERRSSS 346
Query: 885 KKTCSTILLVIQSSSVI 835
+T S QSSS I
Sbjct: 347 SRTFSAT*SSTQSSSPI 397
Score = 26.7 bits (52), Expect(2) = 8e-046
Identities = 20/53 (37%), Positives = 23/53 (43%)
Frame = -2 / +3
Query: 734 TCW*SSLRRKCW*L*GYHMQGRKCYCCFKGSQA*SN**AAAY*RCWRFCDVGR 576
+CW*S K W G H+ CY KG A* + A C R VGR
Sbjct: 501 SCW*SPGGGKRWGFQGRHL*RW*CYSGVKGP*A*PDRREAEDRGCRRLRHVGR 659
>gb|BG343905.2|BG343905 HVSMEg0007B08f Hordeum vulgare pre-anthesis spike EST library
HVcDNA0008 (white to yellow anther) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEg0007B08f, mRNA sequence
Length = 850
Score = 184 bits (396), Expect = 8e-046
Identities = 78/102 (76%), Positives = 90/102 (88%)
Frame = -3 / +1
Query: 577 GTWRVGGVLAVSRAFGDKLLKQYVVVDPEIREEVVDDTLEFLILASDGLWDVVSNEEAVA 398
GTWRVGGVLAVSRAFGDKLLKQYVV DP+I+EEVVD +LEFLILASDGLWDVV+N+EAVA
Sbjct: 1 GTWRVGGVLAVSRAFGDKLLKQYVVADPQIKEEVVDSSLEFLILASDGLWDVVTNDEAVA 180
Query: 397 MTRSIQDPEEAAKMLLQEAYKRESSDNITCVVVHFLHGQGSS 272
M + I+DPE+AAK LLQEA +R S+DNIT V+V FL G +S
Sbjct: 181 MVKPIEDPEQAAKGLLQEASRRGSADNITVVIVRFLDGTTTS 306
Score = 124 bits (265), Expect = 1e-027
Identities = 60/97 (61%), Positives = 63/97 (64%)
Frame = +3 / -3
Query: 285 PCKKCTTTQVMLSLLSLLYASCKSIFAASSGS*MDLVIATASSLETTSHSPSLARIRNXX 464
P KK T T VMLS L L AS S FAA SGS + L +ATASSL TTSHSPSLAR+RN
Sbjct: 293 PSKKRTMTTVMLSALPLREAS*SSPFAACSGSSIGLTMATASSLVTTSHSPSLARMRNSS 114
Query: 465 XXXXXXXXXXXXXXXYCFKSLSPKARETASTPPTRHV 575
YCFKSLSPKARETA TPPTRHV
Sbjct: 113 ELSTTSSLICGSATTYCFKSLSPKARETARTPPTRHV 3
>gb|BE421191.1|BE421191 HWM006.G04 ITEC HWM Barley Leaf Library Hordeum vulgare subsp.
vulgare cDNA clone HWM006.G04, mRNA sequence
Length = 811
Score = 181 bits (390), Expect = 6e-045
Identities = 69/115 (60%), Positives = 93/115 (80%)
Frame = -3 / +1
Query: 1072 SSVSGGGLSQNGRFSYGYASSPGKRASMEDFYETKIDCVDGQIVGLFGVFDGHGGAKVAE 893
S +GGG+S+ GRFSYG+AS GKRASMEDFYET++D VDG+ VGLFGVFDGHGGA+ AE
Sbjct: 163 SPATGGGISEKGRFSYGFASCAGKRASMEDFYETRVDDVDGETVGLFGVFDGHGGARAAE 342
Query: 892 YVKENLFNNLVSHPKFISDTKVAIDDAYKSTDSEFLESDSSQNQCGSTASTAVLV 728
YVK++LF+NL+ HPKF++DTK AI + + TDSEFL++DSS + + ++ ++
Sbjct: 343 YVKKHLFSNLIKHPKFMTDTKAAIAETFNHTDSEFLKADSSHTRDAGSTASTAIL 507
Score = 141 bits (302), Expect(2) = 3e-038
Identities = 57/73 (78%), Positives = 63/73 (86%)
Frame = -3 / +1
Query: 775 SSQNQCGSTASTAVLVGDRLFVANVGDSRAIICREGNAIAVSKDHKPDQTDERQRIEDAG 596
S GSTASTA+LVG RL VANVGDSRA++ + G AIAVS+DHKPDQTDERQRIE+AG
Sbjct: 463 SHTRDAGSTASTAILVGGRLVVANVGDSRAVVSKGGKAIAVSRDHKPDQTDERQRIEEAG 642
Query: 595 GFVMWAGTWRVGG 557
GFVMWAGTWRVGG
Sbjct: 643 GFVMWAGTWRVGG 681
Score = 119 bits (254), Expect(2) = 6e-041
Identities = 53/80 (66%), Positives = 59/80 (73%)
Frame = +3 / -3
Query: 519 KSLSPKARETASTPPTRHVPAHITKPPASSIRCRSSV*SGL*SFETAIAFPSLHMIALES 698
K ++ + + PPTRHVPAHITKPPASSI C SSV SGL*S ETAIAFP L ALES
Sbjct: 719 KFITNRLEKQQEQPPTRHVPAHITKPPASSILCLSSVWSGL*SLETAIAFPPLETTALES 540
Query: 699 PTFATKRRSPTSTAVDAVDP 758
PTFAT R PT AV+AV+P
Sbjct: 539 PTFATTNRPPTRIAVEAVEP 480
Score = 68.9 bits (144), Expect(2) = 6e-041
Identities = 33/98 (33%), Positives = 51/98 (52%)
Frame = +2 / -2
Query: 767 LTTVRF*EFTVGAFISIIYSDFSITDELWMTNKIVEQVFFNILCYLSTTMTIKNSKKTNY 946
+ T+ F + +G S I E M + I E+V +I S+T+TIK +K+ N
Sbjct: 468 VATISFQKL*IGMIECFSNSSLCICHEFRMLD*IAEKVLLHIFSCSSSTVTIKYAKQPNS 289
Query: 947 LAINTINFCLIEVFHGCPFTRGACIAIAKSTILAEAAA 1060
L+IN I+ CL+E+ H CPF AC I + + A+
Sbjct: 288 LSINIIHSCLVEILH*CPFPSTACEPITEPAFFTDPAS 175
Score = 40.9 bits (83), Expect(2) = 3e-038
Identities = 20/39 (51%), Positives = 25/39 (64%)
Frame = -2 / +3
Query: 1061 RRRPQPEW*I*LWLCKLPW*KGIHGRLL*DKN*LC*WPD 945
RRR Q + + LW+ KL W KGI+G L DK+ C*W D
Sbjct: 174 RRRDQ*KRQVQLWVRKLCWEKGINGGFLRDKSG*C*WRD 290
>gb|BQ470305.1|BQ470305 HX02H16r HX Hordeum vulgare subsp. vulgare cDNA clone HX02H16
5-PRIME, mRNA sequence
Length = 584
Score = 181 bits (390), Expect = 6e-045
Identities = 69/115 (60%), Positives = 93/115 (80%)
Frame = -3 / +3
Query: 1072 SSVSGGGLSQNGRFSYGYASSPGKRASMEDFYETKIDCVDGQIVGLFGVFDGHGGAKVAE 893
S +GGG+S+ GRFSYG+AS GKRASMEDFYET++D VDG+ VGLFGVFDGHGGA+ AE
Sbjct: 195 SPATGGGISEKGRFSYGFASCAGKRASMEDFYETRVDDVDGETVGLFGVFDGHGGARAAE 374
Query: 892 YVKENLFNNLVSHPKFISDTKVAIDDAYKSTDSEFLESDSSQNQCGSTASTAVLV 728
YVK++LF+NL+ HPKF++DTK AI + + TDSEFL++DSS + + ++ ++
Sbjct: 375 YVKKHLFSNLIKHPKFMTDTKAAIAETFNHTDSEFLKADSSHTRDAGSTASTAIL 539
>gb|BQ762722.1|BQ762722 EBro02_SQ004_J20_R root, 3 week, hydroponic grown, low nitrogen, cv
Optic, EBro02 Hordeum vulgare subsp. vulgare cDNA clone
EBro02_SQ004_J20 5', mRNA sequence
Length = 686
Score = 181 bits (390), Expect = 6e-045
Identities = 69/115 (60%), Positives = 93/115 (80%)
Frame = -3 / +1
Query: 1072 SSVSGGGLSQNGRFSYGYASSPGKRASMEDFYETKIDCVDGQIVGLFGVFDGHGGAKVAE 893
S +GGG+S+ GRFSYG+AS GKRASMEDFYET++D VDG+ VGLFGVFDGHGGA+ AE
Sbjct: 175 SPATGGGISEKGRFSYGFASCAGKRASMEDFYETRVDDVDGETVGLFGVFDGHGGARAAE 354
Query: 892 YVKENLFNNLVSHPKFISDTKVAIDDAYKSTDSEFLESDSSQNQCGSTASTAVLV 728
YVK++LF+NL+ HPKF++DTK AI + + TDSEFL++DSS + + ++ ++
Sbjct: 355 YVKKHLFSNLIKHPKFMTDTKAAIAETFNHTDSEFLKADSSHTRDAGSTASTAIL 519
Score = 127 bits (272), Expect(2) = 3e-034
Identities = 53/70 (75%), Positives = 57/70 (81%)
Frame = -3 / +1
Query: 775 SSQNQCGSTASTAVLVGDRLFVANVGDSRAIICREGNAIAVSKDHKPDQTDERQRIEDAG 596
S GSTASTA+LVG RL VANVGDSRA + G AIAVS+DH PDQTDERQRIE+AG
Sbjct: 475 SHTRDAGSTASTAILVGGRLVVANVGDSRAAASKGGKAIAVSRDHTPDQTDERQRIEEAG 654
Query: 595 GFVMWAGTWR 566
GFVMWAGTWR
Sbjct: 655 GFVMWAGTWR 684
Score = 111 bits (236), Expect(2) = 2e-038
Identities = 49/65 (75%), Positives = 53/65 (81%)
Frame = +3 / -1
Query: 564 TRHVPAHITKPPASSIRCRSSV*SGL*SFETAIAFPSLHMIALESPTFATKRRSPTSTAV 743
TRHVPAHITKPPASSI C SSV SG+*S ETAIAFP L ALESPTFAT +R PT AV
Sbjct: 686 TRHVPAHITKPPASSILCLSSVWSGV*SLETAIAFPPLEAAALESPTFATTKRPPTRIAV 507
Query: 744 DAVDP 758
+AV+P
Sbjct: 506 EAVEP 492
Score = 68.9 bits (144), Expect(2) = 2e-038
Identities = 33/98 (33%), Positives = 51/98 (52%)
Frame = +2 / -3
Query: 767 LTTVRF*EFTVGAFISIIYSDFSITDELWMTNKIVEQVFFNILCYLSTTMTIKNSKKTNY 946
+ T+ F + +G S I E M + I E+V +I S+T+TIK +K+ N
Sbjct: 480 VATISFQKL*IGMIECFSNSSLCICHEFRMLD*IAEKVLLHIFSCSSSTVTIKYAKQPNS 301
Query: 947 LAINTINFCLIEVFHGCPFTRGACIAIAKSTILAEAAA 1060
L+IN I+ CL+E+ H CPF AC I + + A+
Sbjct: 300 LSINIIHSCLVEILH*CPFPSTACEPITEPAFFTDPAS 187
Score = 40.9 bits (83), Expect(2) = 3e-034
Identities = 20/39 (51%), Positives = 25/39 (64%)
Frame = -2 / +3
Query: 1061 RRRPQPEW*I*LWLCKLPW*KGIHGRLL*DKN*LC*WPD 945
RRR Q + + LW+ KL W KGI+G L DK+ C*W D
Sbjct: 186 RRRDQ*KRQVQLWVRKLCWEKGINGGFLRDKSG*C*WRD 302
>gb|BQ764178.1|BQ764178 EBan01_SQ005_H05 _R anther, yellow stage, no treatment, cv Optic,
EBan01 Hordeum vulgare subsp. vulgare cDNA clone
EBan01_SQ005_H05 5', mRNA sequence
Length = 554
Score = 181 bits (390), Expect = 6e-045
Identities = 69/115 (60%), Positives = 93/115 (80%)
Frame = -3 / +2
Query: 1072 SSVSGGGLSQNGRFSYGYASSPGKRASMEDFYETKIDCVDGQIVGLFGVFDGHGGAKVAE 893
S +GGG+S+ GRFSYG+AS GKRASMEDFYET++D VDG+ VGLFGVFDGHGGA+ AE
Sbjct: 92 SPATGGGISEKGRFSYGFASCAGKRASMEDFYETRVDDVDGETVGLFGVFDGHGGARAAE 271
Query: 892 YVKENLFNNLVSHPKFISDTKVAIDDAYKSTDSEFLESDSSQNQCGSTASTAVLV 728
YVK++LF+NL+ HPKF++DTK AI + + TDSEFL++DSS + + ++ ++
Sbjct: 272 YVKKHLFSNLIKHPKFMTDTKAAIAETFNHTDSEFLKADSSHTRDAGSTASTAIL 436
Score = 93.2 bits (197), Expect(2) = 4e-024
Identities = 39/54 (72%), Positives = 44/54 (81%)
Frame = -3 / +2
Query: 775 SSQNQCGSTASTAVLVGDRLFVANVGDSRAIICREGNAIAVSKDHKPDQTDERQ 614
S GSTASTA+LVG RL VANVGDSRA++ + G AIAVS+DHKPDQTDERQ
Sbjct: 392 SHTRDAGSTASTAILVGGRLVVANVGDSRAVVSKGGKAIAVSRDHKPDQTDERQ 553
Score = 74.4 bits (156), Expect(2) = 2e-027
Identities = 34/48 (70%), Positives = 37/48 (77%)
Frame = +3 / -3
Query: 615 CRSSV*SGL*SFETAIAFPSLHMIALESPTFATKRRSPTSTAVDAVDP 758
C SSV SGL*S ETAIAFP L ALESPTFAT +R PT AV+AV+P
Sbjct: 552 CLSSVWSGL*SLETAIAFPPLETTALESPTFATTKRPPTRIAVEAVEP 409
Score = 68.9 bits (144), Expect(2) = 2e-027
Identities = 33/98 (33%), Positives = 51/98 (52%)
Frame = +2 / -2
Query: 767 LTTVRF*EFTVGAFISIIYSDFSITDELWMTNKIVEQVFFNILCYLSTTMTIKNSKKTNY 946
+ T+ F + +G S I E M + I E+V +I S+T+TIK +K+ N
Sbjct: 397 VATISFQKL*IGMIECFSNSSLCICHEFRMLD*IAEKVLLHIFSCSSSTVTIKYAKQPNS 218
Query: 947 LAINTINFCLIEVFHGCPFTRGACIAIAKSTILAEAAA 1060
L+IN I+ CL+E+ H CPF AC I + + A+
Sbjct: 217 LSINIIHSCLVEILH*CPFPSTACEPITEPAFFTDPAS 104
Score = 40.9 bits (83), Expect(2) = 4e-024
Identities = 20/39 (51%), Positives = 25/39 (64%)
Frame = -2 / +1
Query: 1061 RRRPQPEW*I*LWLCKLPW*KGIHGRLL*DKN*LC*WPD 945
RRR Q + + LW+ KL W KGI+G L DK+ C*W D
Sbjct: 103 RRRDQ*KRQVQLWVRKLCWEKGINGGFLRDKSG*C*WRD 219
>gb|BU997011.1|BU997011 HI06J17r HI Hordeum vulgare subsp. vulgare cDNA clone HI06J17
5-PRIME, mRNA sequence
Length = 555
Score = 181 bits (390), Expect = 6e-045
Identities = 69/115 (60%), Positives = 93/115 (80%)
Frame = -3 / +2
Query: 1072 SSVSGGGLSQNGRFSYGYASSPGKRASMEDFYETKIDCVDGQIVGLFGVFDGHGGAKVAE 893
S +GGG+S+ GRFSYG+AS GKRASMEDFYET++D VDG+ VGLFGVFDGHGGA+ AE
Sbjct: 188 SPATGGGISEKGRFSYGFASCAGKRASMEDFYETRVDDVDGETVGLFGVFDGHGGARAAE 367
Query: 892 YVKENLFNNLVSHPKFISDTKVAIDDAYKSTDSEFLESDSSQNQCGSTASTAVLV 728
YVK++LF+NL+ HPKF++DTK AI + + TDSEFL++DSS + + ++ ++
Sbjct: 368 YVKKHLFSNLIKHPKFMTDTKAAIAETFNHTDSEFLKADSSHTRDAGSTASTAIL 532
>gb|BU999717.1|BU999717 HI15H15r HI Hordeum vulgare subsp. vulgare cDNA clone HI15H15
5-PRIME, mRNA sequence
Length = 608
Score = 181 bits (390), Expect = 6e-045
Identities = 69/115 (60%), Positives = 93/115 (80%)
Frame = -3 / +3
Query: 1072 SSVSGGGLSQNGRFSYGYASSPGKRASMEDFYETKIDCVDGQIVGLFGVFDGHGGAKVAE 893
S +GGG+S+ GRFSYG+AS GKRASMEDFYET++D VDG+ VGLFGVFDGHGGA+ AE
Sbjct: 201 SPATGGGISEKGRFSYGFASCAGKRASMEDFYETRVDDVDGETVGLFGVFDGHGGARAAE 380
Query: 892 YVKENLFNNLVSHPKFISDTKVAIDDAYKSTDSEFLESDSSQNQCGSTASTAVLV 728
YVK++LF+NL+ HPKF++DTK AI + + TDSEFL++DSS + + ++ ++
Sbjct: 381 YVKKHLFSNLIKHPKFMTDTKAAIAETFNHTDSEFLKADSSHTRDAGSTASTAIL 545
>gb|CA027036.1|CA027036 HZ57L10r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ57L10
5-PRIME, mRNA sequence
Length = 397
Score = 181 bits (390), Expect = 6e-045
Identities = 69/115 (60%), Positives = 93/115 (80%)
Frame = -3 / +1
Query: 1072 SSVSGGGLSQNGRFSYGYASSPGKRASMEDFYETKIDCVDGQIVGLFGVFDGHGGAKVAE 893
S +GGG+S+ GRFSYG+AS GKRASMEDFYET++D VDG+ VGLFGVFDGHGGA+ AE
Sbjct: 4 SPATGGGISEKGRFSYGFASCAGKRASMEDFYETRVDDVDGETVGLFGVFDGHGGARAAE 183
Query: 892 YVKENLFNNLVSHPKFISDTKVAIDDAYKSTDSEFLESDSSQNQCGSTASTAVLV 728
YVK++LF+NL+ HPKF++DTK AI + + TDSEFL++DSS + + ++ ++
Sbjct: 184 YVKKHLFSNLIKHPKFMTDTKAAIAETFNHTDSEFLKADSSHTRDAGSTASTAIL 348
>gb|CA027334.1|CA027334 HZ58J11r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ58J11
5-PRIME, mRNA sequence
Length = 496
Score = 181 bits (390), Expect = 6e-045
Identities = 69/115 (60%), Positives = 93/115 (80%)
Frame = -3 / +2
Query: 1072 SSVSGGGLSQNGRFSYGYASSPGKRASMEDFYETKIDCVDGQIVGLFGVFDGHGGAKVAE 893
S +GGG+S+ GRFSYG+AS GKRASMEDFYET++D VDG+ VGLFGVFDGHGGA+ AE
Sbjct: 5 SPATGGGISEKGRFSYGFASCAGKRASMEDFYETRVDDVDGETVGLFGVFDGHGGARAAE 184
Query: 892 YVKENLFNNLVSHPKFISDTKVAIDDAYKSTDSEFLESDSSQNQCGSTASTAVLV 728
YVK++LF+NL+ HPKF++DTK AI + + TDSEFL++DSS + + ++ ++
Sbjct: 185 YVKKHLFSNLIKHPKFMTDTKAAIAETFNHTDSEFLKADSSHTRDAGSTASTAIL 349
Score = 114 bits (244), Expect(2) = 1e-030
Identities = 48/64 (75%), Positives = 54/64 (84%)
Frame = -3 / +2
Query: 775 SSQNQCGSTASTAVLVGDRLFVANVGDSRAIICREGNAIAVSKDHKPDQTDERQRIEDAG 596
S GSTASTA+LVG RL VANVGDSRA++ + G AIAVS+DHKPDQTDERQRIE+AG
Sbjct: 305 SHTRDAGSTASTAILVGGRLVVANVGDSRAVVSKGGKAIAVSRDHKPDQTDERQRIEEAG 484
Query: 595 GFVM 584
GFVM
Sbjct: 485 GFVM 496
Score = 93.6 bits (198), Expect(2) = 3e-033
Identities = 43/58 (74%), Positives = 46/58 (79%)
Frame = +3 / -2
Query: 585 ITKPPASSIRCRSSV*SGL*SFETAIAFPSLHMIALESPTFATKRRSPTSTAVDAVDP 758
ITKPPASSI C SSV SGL*S ETAIAFP L ALESPTFAT +R PT AV+AV+P
Sbjct: 495 ITKPPASSILCLSSVWSGL*SLETAIAFPPLETTALESPTFATTKRPPTRIAVEAVEP 322
Score = 68.9 bits (144), Expect(2) = 3e-033
Identities = 33/98 (33%), Positives = 51/98 (52%)
Frame = +2 / -1
Query: 767 LTTVRF*EFTVGAFISIIYSDFSITDELWMTNKIVEQVFFNILCYLSTTMTIKNSKKTNY 946
+ T+ F + +G S I E M + I E+V +I S+T+TIK +K+ N
Sbjct: 310 VATISFQKL*IGMIECFSNSSLCICHEFRMLD*IAEKVLLHIFSCSSSTVTIKYAKQPNS 131
Query: 947 LAINTINFCLIEVFHGCPFTRGACIAIAKSTILAEAAA 1060
L+IN I+ CL+E+ H CPF AC I + + A+
Sbjct: 130 LSINIIHSCLVEILH*CPFPSTACEPITEPAFFTDPAS 17
Score = 40.9 bits (83), Expect(2) = 1e-030
Identities = 20/39 (51%), Positives = 25/39 (64%)
Frame = -2 / +1
Query: 1061 RRRPQPEW*I*LWLCKLPW*KGIHGRLL*DKN*LC*WPD 945
RRR Q + + LW+ KL W KGI+G L DK+ C*W D
Sbjct: 16 RRRDQ*KRQVQLWVRKLCWEKGINGGFLRDKSG*C*WRD 132
>gb|BM443042.2|BM443042 EBro02_SQ002_E20_R root, 3 week, hydroponic grown, low nitrogen, cv
Optic, EBro02 Hordeum vulgare subsp. vulgare cDNA clone
EBro02_SQ002_E20 5', mRNA sequence
Length = 528
Score = 181 bits (389), Expect = 8e-045
Identities = 69/114 (60%), Positives = 92/114 (80%)
Frame = -3 / +3
Query: 1072 SSVSGGGLSQNGRFSYGYASSPGKRASMEDFYETKIDCVDGQIVGLFGVFDGHGGAKVAE 893
S +GGG+S+ GRFSYG+AS GKRASMEDFYET++D VDG+ VGLFGVFDGHGGA+ AE
Sbjct: 186 SPATGGGISEKGRFSYGFASCAGKRASMEDFYETRVDDVDGETVGLFGVFDGHGGARAAE 365
Query: 892 YVKENLFNNLVSHPKFISDTKVAIDDAYKSTDSEFLESDSSQNQCGSTASTAVL 731
YVK++LF+NL+ HPKF++DTK AI + + TDSEFL++DSS + + ++ +
Sbjct: 366 YVKKHLFSNLIKHPKFMTDTKAAIAETFNHTDSEFLKADSSHTRDAGSTASTAI 527
>gb|CB881884.1|CB881884 HM11D01w HM Hordeum vulgare subsp. vulgare cDNA clone HM11D01
3-PRIME, mRNA sequence
Length = 553
Score = 178 bits (383), Expect = 5e-044
Identities = 72/114 (63%), Positives = 94/114 (82%)
Frame = -3 / -1
Query: 634 DQTDERQRIEDAGGFVMWAGTWRVGGVLAVSRAFGDKLLKQYVVVDPEIREEVVDDTLEF 455
D++DER+RIE+AGG V ++GTWRVGGVLA+ RAFGD+LLK++VV +PEI+E+ +DD LE+
Sbjct: 553 DRSDERERIENAGGVVTFSGTWRVGGVLAMFRAFGDRLLKRFVVAEPEIQEQEIDDELEY 374
Query: 454 LILASDGLWDVVSNEEAVAMTRSIQDPEEAAKMLLQEAYKRESSDNITCVVVHF 293
LILASDGLWDVVSNE AVA + PE AA+ L + A+ R S+DNITC+V+ F
Sbjct: 373 LILASDGLWDVVSNEHAVAFVKGEVCPEAAARKLTEIAFARGSTDNITCIVIEF 212
>gb|BF255257.2|BF255257 HVSMEf0006G01f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEf0006G01f, mRNA sequence
Length = 600
Score = 177 bits (382), Expect = 7e-044
Identities = 70/122 (57%), Positives = 94/122 (77%)
Frame = -3 / +1
Query: 1072 SSVSGGGLSQNGRFSYGYASSPGKRASMEDFYETKIDCVDGQIVGLFGVFDGHGGAKVAE 893
S +GGG+S+ GRFSYG+AS GKRASMEDFYET++D VDG+ VGLFGV DGHGGA+ AE
Sbjct: 190 SPATGGGISEKGRFSYGFASCAGKRASMEDFYETRVDDVDGETVGLFGVSDGHGGARAAE 369
Query: 892 YVKENLFNNLVSHPKFISDTKVAIDDAYKSTDSEFLESDSSQNQCGSTASTAVLVGDRLF 713
YVK++LF++L+ HPKF++DTK AI D + TDSEFL++DSS + + ++ ++
Sbjct: 370 YVKKHLFSSLIKHPKFMTDTKAAIADTFNHTDSEFLKADSSHTRDAGSTASTAILVSGRL 549
Query: 712 VA 707
VA
Sbjct: 550 VA 555
>gb|BI949154.1|BI949154 HVSMEl0012J08f Hordeum vulgare spike EST library HVcDNA0012 (Fusarium
infected) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEl0012J08f, mRNA sequence
Length = 965
Score = 177 bits (382), Expect = 7e-044
Identities = 67/115 (58%), Positives = 92/115 (80%)
Frame = -3 / +2
Query: 1072 SSVSGGGLSQNGRFSYGYASSPGKRASMEDFYETKIDCVDGQIVGLFGVFDGHGGAKVAE 893
S +GGG+S+ GRFSYG+ S GKRASMEDFY+T++D VDG+ VGLFGVFDGHGGA+ AE
Sbjct: 146 SPATGGGISEKGRFSYGFTSCAGKRASMEDFYKTRVDDVDGETVGLFGVFDGHGGARAAE 325
Query: 892 YVKENLFNNLVSHPKFISDTKVAIDDAYKSTDSEFLESDSSQNQCGSTASTAVLV 728
YVK++LF+NL+ HPKF++DTK AI + + TDSEFL++DSS + + ++ ++
Sbjct: 326 YVKKHLFSNLIKHPKFMTDTKAAIAETFNHTDSEFLKADSSHTRDAGSTASTAIL 490
Score = 94.5 bits (200), Expect(2) = 3e-024
Identities = 40/67 (59%), Positives = 48/67 (71%)
Frame = -3 / +2
Query: 775 SSQNQCGSTASTAVLVGDRLFVANVGDSRAIICREGNAIAVSKDHKPDQTDERQRIEDAG 596
S GSTASTA+LVG RL ANVGDSR ++ + GNAIAVS+DH P QT +RQ+I +
Sbjct: 446 SHTRDAGSTASTAILVGGRLVAANVGDSRTVVPKGGNAIAVSRDHNPAQTGKRQKIGEP* 625
Query: 595 GFVMWAG 575
FV WAG
Sbjct: 626 SFVKWAG 646
Score = 77.1 bits (162), Expect(2) = 1e-027
Identities = 36/61 (59%), Positives = 41/61 (67%)
Frame = +3 / -3
Query: 576 PAHITKPPASSIRCRSSV*SGL*SFETAIAFPSLHMIALESPTFATKRRSPTSTAVDAVD 755
PAH+TK S I C V +GL*S ETAIAFP L LESPTFA +R PT AV+AV+
Sbjct: 645 PAHLTKLQGSPIFCLLPVWAGL*SLETAIAFPPLGTTVLESPTFAATKRPPTRIAVEAVE 466
Query: 756 P 758
P
Sbjct: 465 P 463
Score = 66.6 bits (139), Expect(2) = 1e-027
Identities = 32/98 (32%), Positives = 51/98 (52%)
Frame = +2 / -2
Query: 767 LTTVRF*EFTVGAFISIIYSDFSITDELWMTNKIVEQVFFNILCYLSTTMTIKNSKKTNY 946
+ T+ F + +G S I E M + I E+V +I S+T+TIK +K+ +
Sbjct: 451 VATISFQKL*IGMIECFSNSSLCICHEFRMLD*IAEKVLLHIFSCSSSTVTIKYAKQPDS 272
Query: 947 LAINTINFCLIEVFHGCPFTRGACIAIAKSTILAEAAA 1060
L+IN I+ CL+E+ H CPF AC I + + A+
Sbjct: 271 LSINIIHSCLVEILH*CPFPSTACEPITEPAFFTDPAS 158
Score = 40.9 bits (83), Expect(2) = 3e-024
Identities = 20/39 (51%), Positives = 25/39 (64%)
Frame = -2 / +1
Query: 1061 RRRPQPEW*I*LWLCKLPW*KGIHGRLL*DKN*LC*WPD 945
RRR Q + + LW+ KL W KGI+G L DK+ C*W D
Sbjct: 157 RRRDQ*KRQVQLWVHKLCWEKGINGGFLQDKSG*C*WRD 273
>gb|BM369492.2|BM369492 EBem07_SQ003_L23_R embryo, 28 DPA, no treatment, cv Optic, EBem07
Hordeum vulgare subsp. vulgare cDNA clone
EBem07_SQ003_L23 5', mRNA sequence
Length = 562
Score = 177 bits (382), Expect = 7e-044
Identities = 68/113 (60%), Positives = 92/113 (81%)
Frame = -3 / +3
Query: 1066 VSGGGLSQNGRFSYGYASSPGKRASMEDFYETKIDCVDGQIVGLFGVFDGHGGAKVAEYV 887
VSGGG S+NG+FSYGYAS GKR+SMEDF+ET+ID VDG+ VGLFGVFDGHGGA+ AE+V
Sbjct: 171 VSGGGFSENGKFSYGYASCLGKRSSMEDFHETRIDGVDGETVGLFGVFDGHGGARAAEFV 350
Query: 886 KENLFNNLVSHPKFISDTKVAIDDAYKSTDSEFLESDSSQNQCGSTASTAVLV 728
K+NLF+NL+ HPKF +DTK AI + + TDSE L++D++ N+ + ++ ++
Sbjct: 351 KQNLFSNLIKHPKFFTDTKSAIAETFTHTDSELLKADTAHNRDAGSTASTAIL 509
Score = 72.5 bits (152), Expect(2) = 3e-021
Identities = 34/81 (41%), Positives = 51/81 (62%)
Frame = +2 / -3
Query: 824 SDFSITDELWMTNKIVEQVFFNILCYLSTTMTIKNSKKTNYLAINTINFCLIEVFHGCPF 1003
S I +ELW+ + + E+V + L S+TM ++N+++ + L+I+ I+ CL+EV HG F
Sbjct: 413 SRLGIGEELWVLD*VAEKVLLDELRRSSSTMAVENTEQPDGLSIDAIDSCLVEVLHGRSF 234
Query: 1004 TRGACIAIAKSTILAEAAAAD 1066
A I IAK TIL E AA D
Sbjct: 233 P*AARITIAKLTILTEPAATD 171
Score = 49.6 bits (102), Expect(2) = 3e-021
Identities = 21/26 (80%), Positives = 22/26 (84%)
Frame = +3 / -1
Query: 681 MIALESPTFATKRRSPTSTAVDAVDP 758
M ALESPTFAT RRSPT AV+AVDP
Sbjct: 559 MTALESPTFATTRRSPTRMAVEAVDP 482
>gb|BM368454.2|BM368454 EBem08_SQ002_F06_R embryo, 40 DPA, no treatment, cv Optic, EBem08
Hordeum vulgare subsp. vulgare cDNA clone
EBem08_SQ002_F06 5', mRNA sequence
Length = 468
Score = 177 bits (382), Expect = 7e-044
Identities = 68/113 (60%), Positives = 92/113 (81%)
Frame = -3 / +1
Query: 1066 VSGGGLSQNGRFSYGYASSPGKRASMEDFYETKIDCVDGQIVGLFGVFDGHGGAKVAEYV 887
VSGGG S+NG+FSYGYAS GKR+SMEDF+ET+ID VDG+ VGLFGVFDGHGGA+ AE+V
Sbjct: 91 VSGGGFSENGKFSYGYASCLGKRSSMEDFHETRIDGVDGETVGLFGVFDGHGGARAAEFV 270
Query: 886 KENLFNNLVSHPKFISDTKVAIDDAYKSTDSEFLESDSSQNQCGSTASTAVLV 728
K+NLF+NL+ HPKF +DTK AI + + TDSE L++D++ N+ + ++ ++
Sbjct: 271 KQNLFSNLIKHPKFFTDTKSAIAETFTHTDSELLKADTAHNRDAGSTASTAIL 429
>gb|CA007409.1|CA007409 HU07O02r HU Hordeum vulgare subsp. vulgare cDNA clone HU07O02
5-PRIME, mRNA sequence
Length = 526
Score = 177 bits (382), Expect = 7e-044
Identities = 68/113 (60%), Positives = 92/113 (81%)
Frame = -3 / +2
Query: 1066 VSGGGLSQNGRFSYGYASSPGKRASMEDFYETKIDCVDGQIVGLFGVFDGHGGAKVAEYV 887
VSGGG S+NG+FSYGYAS GKR+SMEDF+ET+ID VDG+ VGLFGVFDGHGGA+ AE+V
Sbjct: 149 VSGGGFSENGKFSYGYASCLGKRSSMEDFHETRIDGVDGETVGLFGVFDGHGGARAAEFV 328
Query: 886 KENLFNNLVSHPKFISDTKVAIDDAYKSTDSEFLESDSSQNQCGSTASTAVLV 728
K+NLF+NL+ HPKF +DTK AI + + TDSE L++D++ N+ + ++ ++
Sbjct: 329 KQNLFSNLIKHPKFFTDTKSAIAETFTHTDSELLKADTAHNRDAGSTASTAIL 487
>gb|CA007733.1|CA007733 HU08N16r HU Hordeum vulgare subsp. vulgare cDNA clone HU08N16
5-PRIME, mRNA sequence
Length = 492
Score = 176 bits (378), Expect = 2e-043
Identities = 67/99 (67%), Positives = 85/99 (85%)
Frame = -3 / +2
Query: 1072 SSVSGGGLSQNGRFSYGYASSPGKRASMEDFYETKIDCVDGQIVGLFGVFDGHGGAKVAE 893
S +GGG+S+ GRFSYG+AS GKRASMEDFYET++D VDG+ VGLFGVFDGHGGA+ AE
Sbjct: 194 SPATGGGISEKGRFSYGFASCAGKRASMEDFYETRVDDVDGETVGLFGVFDGHGGARAAE 373
Query: 892 YVKENLFNNLVSHPKFISDTKVAIDDAYKSTDSEFLESD 776
YVK++LF+NL+ HPKF++DTK AI + + TDSEFL++D
Sbjct: 374 YVKKHLFSNLIKHPKFMTDTKAAIAETFNHTDSEFLKAD 490
Database: Hordeum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:16 PM
Number of letters in database: 175,134,539
Number of sequences in database: 312,970
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 476,018,996
Number of Sequences: 312970
Number of extensions: 7477846
Number of successful extensions: 63497
Number of sequences better than 1.0e-020: 137
length of database: 58,378,179
effective HSP length: 52
effective length of database: 42,103,739
effective search space used: 12841640395
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)