TBLASTX 2.2.10 [Oct-19-2004]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 2276642.2.1
         (1062 letters)

Database: Hordeum_nucl_with_EST.fasta 
           312,970 sequences; 175,134,539 total letters



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|BE420880.1|BE420880  HWM003.E05 ITEC HWM Barley Leaf Libr...   318   3e-086
gb|CK125352.1|CK125352  BES1824107m07 BES1824 Hordeum vulgar...   258   3e-075
gb|AV836787.1|AV836787  AV836787 K. Sato unpublished cDNA li...   103   2e-040
gb|AL505038.1|AL505038  AL505038 Hordeum vulgare Barke roots...   146   2e-034
gb|BM098175.2|BM098175  EBpi03_SQ002_M05_R pistil, 4 DPA, no...   125   5e-028
>gb|BE420880.1|BE420880 HWM003.E05 ITEC HWM Barley Leaf Library Hordeum vulgare subsp.
            vulgare cDNA clone HWM003.E05, mRNA sequence
          Length = 890

 Score =  318 bits (689), Expect = 3e-086
 Identities = 122/152 (80%), Positives = 134/152 (88%)
 Frame = -2 / +2

                                                                        
Query: 1061 SPPDTPLRLADLYDKKDVYTLDFPTMPIDGPPVIRTSVINSTYKNFLEIVFQNNDSTVQT 882
            SPP TPLRLADLY+KK+VYTLDFP MP DGPPVI +SVINSTYKNF+EIVFQNND+ VQT
Sbjct: 260  SPPATPLRLADLYEKKEVYTLDFPMMPSDGPPVIGSSVINSTYKNFMEIVFQNNDTKVQT 439

                                                                        
Query: 881  YHIDGYAFWVVGMDYGEWTENSRGTYNKWDGVSRCTTQVFPGAWTAVMLSLDSPGFWNVR 702
            YHIDGYAFWVVGMDYGEWT++SRGTYNKWDGVSRCTTQVFPGAWT  +L LDSP FWNVR
Sbjct: 440  YHIDGYAFWVVGMDYGEWTDSSRGTYNKWDGVSRCTTQVFPGAWTGGLLPLDSPAFWNVR 619

                                            
Query: 701  TENLDTWYLGQETYIRVVDPNGGYNVTEMVAP 606
            TENL  WYL QETY+RVV+P+G +N T    P
Sbjct: 620  TENLGPWYLWQETYLRVVEPDGSFNWTGFALP 715

 Score =  240 bits (518), Expect = 1e-062
 Identities = 116/159 (72%), Positives = 125/159 (78%)
 Frame = +1 / -3

                                                                        
Query: 586  PQ*SMLSGATISVTL*PPFGSTTLM*VS*PRYHVSRFSVRTFQNPGLSSDSITAVHAPGN 765
            P+  +  G+   V L  P GSTTL *VS  RY   RFSVRTFQN GLSS +   VHAPGN
Sbjct: 735  PKRGLCLGSANPVQLKLPSGSTTLR*VSCHRYQGPRFSVRTFQNAGLSSGNRPPVHAPGN 556

                                                                        
Query: 766  T*VVQRETPSHLL*VPRLFSVHSP*SIPTTQNAYPSMW*VWTVESLF*NTISKKFLYVEL 945
            T*VVQRETPSHLL VPRL SVHSP*SIPTTQNAYPS+W*V T  SLF*NTIS KFLYVEL
Sbjct: 555  T*VVQRETPSHLLYVPRLLSVHSP*SIPTTQNAYPSIW*V*TFVSLF*NTISMKFLYVEL 376

                                                   
Query: 946  MTDVLITGGPSIGIVGKSSV*TSFLSYRSANLRGVSGGE 1062
            MT+  ITGGPS GI+GKSSV*TSF S RSA+L GV+GGE
Sbjct: 375  MTEEPITGGPSDGIIGKSSV*TSFFS*RSASLNGVAGGE 259

 Score =  182 bits (391), Expect = 4e-045
 Identities = 80/140 (57%), Positives = 100/140 (71%)
 Frame = +3 / -2

                                                                        
Query: 621  SNIIASIWIHHPDVSLLTQIPRVQVFCPYIPKSWAVK*QHHSSPCSRKHLSRATRNTIPL 800
            S + AS+  HHP VSLL  +P  QV   ++P+  AV+ Q  + PCSRKHLS AT N IPL
Sbjct: 700  SPVEASVRFHHPKVSLLP*VPGAQVLRAHVPERRAVERQQAAGPCSRKHLSGATGNAIPL 521

                                                                        
Query: 801  VVSPTAILSPLTIVHSYNPECISINVVGLDS*VIVLKYNFQKVLVCGVNDRCSDHWRSIN 980
            VV PTA + PL IVHSYNPE ISI++VGL+  V+VLK+N  +VLV  V+DR +DH RSI 
Sbjct: 520  VVRPTAAVGPLAIVHSYNPERISIDMVGLNLRVVVLKHNLHEVLVRRVDDRRADHRRSIR 341

                                
Query: 981  WHCREVKCVDILLVVQICQP 1040
            WH  EV+CVD  L V+IC+P
Sbjct: 340  WHHWEVECVDFFLFVEICKP 281

 Score =  175 bits (376), Expect = 5e-043
 Identities = 82/139 (58%), Positives = 90/139 (64%)
 Frame = -3 / +3

                                                                        
Query: 1048 LL*GWQICTTRRMSTHLTSLQCQLMDRQ*SEHLSLTPHTRTFWKLYFRTMTQLSRPTTLM 869
            L *G QI T R+ STH TS  C LMDR+*S  LS T  TRT W+L FRT T+  RPT  M
Sbjct: 273  LH*GLQISTKRKKSTHSTSQ*CHLMDRR*SALLSSTRRTRTSWRLCFRTTTRRFRPTISM 452

                                                                        
Query: 868  DMHSGL*EWTMVSGLRIAVGLTTSGMVFLVARLRCFREHGLL*CCHLTAQDFGMYGQKTW 689
            DM SGL*EWTM SG   AVG TTSGM F VA LRCF EHG   CC  TA+  G   ++TW
Sbjct: 453  DMRSGL*EWTMASGPTAAVGRTTSGMAFPVAPLRCFLEHGPAACCRSTARRSGTCARRTW 632

                               
Query: 688  TRGIWVRRLTSGWWIQMEA 632
              G + RRLT GWW   EA
Sbjct: 633  APGTYGRRLTLGWWNLTEA 689

 Score =  170 bits (366), Expect = 1e-041
 Identities = 75/140 (53%), Positives = 93/140 (66%)
 Frame = -1 / +1

                                                                        
Query: 1062 FPTRHSSKVGRSVRQEGCLHT*LPYNAN*WTASDQNICH*LHIQELFGNCISEQ*LNCPD 883
            F   +S +  RS+R+E  LHT LP +A *WTA D+  CH L +QEL G+C+SEQ     D
Sbjct: 259  FTACYSIEACRSLRKERSLHTRLPNDAI*WTAGDRLFCHQLDVQELHGDCVSEQRHEGSD 438

                                                                        
Query: 882  LPH*WICILGCRNGLW*VD*E*PWDLQQVGWCFSLHDSGVSGSMDCCDAVT*QPRILECT 703
            LP+ WIC+LGCRNGLW VD + PWD+QQVGW F LH SGVS SMD       QP +LE  
Sbjct: 439  LPYRWICVLGCRNGLWRVDRQQPWDVQQVGWRFPLHHSGVSWSMDRRPVAARQPGVLERA 618

                                
Query: 702  DRKPGHVVSGSGDLHQGGGS 643
              +PG +V  +GDL  GGG+
Sbjct: 619  HGEPGPLVPMAGDLP*GGGT 678

 Score =  142 bits (305), Expect = 3e-033
 Identities = 64/108 (59%), Positives = 72/108 (66%)
 Frame = +2 / -1

                                                                        
Query: 710  SKILGCQVTASQQSMLPETPESCNEKHHPTCCKSHGYSQSTHHSPFLQPRMHIHQCGRSG 889
            S+  GC+    ++SML ETPE CN K HPTCC SHG  +ST HSPFLQPR HIH+ GRS 
Sbjct: 611  SRTPGCRAATGRRSMLQETPEWCNGKRHPTCCTSHGCCRSTRHSPFLQPRTHIHRYGRSE 432

                                                            
Query: 890  QLSHCSEIQFPKSSCMWS**QMF*SLAVHQLAL*GSQVCRHPSCRTDL 1033
                CSE Q P SSC  S**Q   S AVHQ+A  GS+VCR  S R DL
Sbjct: 431  PSCRCSETQSP*SSCTSS**QKSRSPAVHQMASLGSRVCRLLSFRRDL 288
>gb|CK125352.1|CK125352 BES1824107m07 BES1824 Hordeum vulgare subsp. vulgare cDNA clone
            MPMGp2010M077 5-PRIME, mRNA sequence
          Length = 930

 Score =  258 bits (557), Expect(2) = 3e-075
 Identities = 96/142 (67%), Positives = 117/142 (82%)
 Frame = -2 / +2

                                                                        
Query: 1061 SPPDTPLRLADLYDKKDVYTLDFPTMPIDGPPVIRTSVINSTYKNFLEIVFQNNDSTVQT 882
            SPP+TPLRLADL++   VY  DFPTMP D PP   +SV+N++YK FLE+VFQNN++ VQT
Sbjct: 347  SPPETPLRLADLHNLTGVYGTDFPTMPSDVPPRRASSVLNASYKGFLEMVFQNNETDVQT 526

                                                                        
Query: 881  YHIDGYAFWVVGMDYGEWTENSRGTYNKWDGVSRCTTQVFPGAWTAVMLSLDSPGFWNVR 702
            YH+DGY+F+VVGMDYGEWT NSRG+YNKWD +SR TTQVFPG WTAV++SLD+ G WN+R
Sbjct: 527  YHLDGYSFFVVGMDYGEWTPNSRGSYNKWDAISRSTTQVFPGGWTAVLVSLDNVGIWNIR 706

                                  
Query: 701  TENLDTWYLGQETYIRVVDPNG 636
             E LD WY GQE Y++V DP G
Sbjct: 707  AEKLDNWYNGQEVYVKVADPLG 772

 Score =  167 bits (360), Expect(2) = 2e-043
 Identities = 86/142 (60%), Positives = 94/142 (66%)
 Frame = +1 / -1

                                                                        
Query: 637  PFGSTTLM*VS*PRYHVSRFSVRTFQNPGLSSDSITAVHAPGNT*VVQRETPSHLL*VPR 816
            P GS T  * S P Y +S FS R FQ P LSSD+ TAVH PGNT VV RE  SHLL  P 
Sbjct: 771  PSGSATFT*TSCPLYQLSSFSARIFQMPTLSSDTRTAVHPPGNTCVVLREMASHLLYEPL 592

                                                                        
Query: 817  LFSVHSP*SIPTTQNAYPSMW*VWTVESLF*NTISKKFLYVELMTDVLITGGPSIGIVGK 996
            LF VHSP*SIPTT+N  PS W*V T  SLF  TIS+K L     TD  + GG S+GIVGK
Sbjct: 591  LFGVHSP*SIPTTKNE*PSRW*V*TSVSLFWKTISRKPL*EAFSTDEALLGGTSLGIVGK 412

                                  
Query: 997  SSV*TSFLSYRSANLRGVSGGE 1062
            S  *T    +RSA+L GVSGGE
Sbjct: 411  SVP*TPVRLWRSASLSGVSGGE 346

 Score =  105 bits (223), Expect(2) = 7e-024
 Identities = 54/142 (38%), Positives = 80/142 (56%)
 Frame = +3 / -3

                                                                        
Query: 630  IASIWIHHPDVSLLTQIPRVQVFCPYIPKSWAVK*QHHSSPCSRKHLSRATRNTIPLVVS 809
            + + WI +  ++LL  +P +Q+   YIP ++ V+      P S +HL    R+ IPLVV 
Sbjct: 778  VVAQWISNFHINLLPIVPIIQLLGTYIPDAYVVQRYQDCGPPSGEHLCGTARDGIPLVV* 599

                                                                        
Query: 810  PTAILSPLTIVHSYNPECISINVVGLDS*VIVLKYNFQKVLVCGVNDRCSDHWRSINWHC 989
              A+  PL IVH    E I+I +VGL+  +IVL+ + ++ LV  +  R S  W  I WHC
Sbjct: 598  TPAVWRPLAIVHPDYKE*ITIQMVGLNIGLIVLEDHLEEALVRSIQHR*SPPWWHIAWHC 419

                                  
Query: 990  REVKCVDILLVVQICQP*RSVG 1055
             EV  VD   VV+I +P  S+G
Sbjct: 418  GEVCSVDPCKVVEISKPQWSLG 353

 Score = 45.1 bits (92), Expect(2) = 3e-075
 Identities = 17/27 (62%), Positives = 20/27 (74%)
 Frame = -2 / +2

                                      
Query: 635 GYNVTEMVAPDNMLYCGLLKDKQKAQK 555
           GYNVTEM+AP   LYCGLLK   K+ +
Sbjct: 770 GYNVTEMIAPKXTLYCGLLKRHXKSHR 850

 Score = 28.6 bits (56), Expect(2) = 2e-043
 Identities = 14/23 (60%), Positives = 16/23 (69%)
 Frame = +1 / -1

                                  
Query: 583 RPQ*SMLSGATISVTL*PPFGST 651
           RPQ* +  GA ISVTL*P   +T
Sbjct: 822 RPQ*RVFFGAIISVTL*PSGSAT 754

 Score = 25.8 bits (50), Expect(2) = 7e-024
 Identities = 7/19 (36%), Positives = 13/19 (68%)
 Frame = +3 / -3

                              
Query: 579 EEATVEHVVWSHHLSNIIA 635
           ++ TVE  +WS H  +++A
Sbjct: 826 QQTTVESXLWSDHFGDVVA 770
>gb|AV836787.1|AV836787 AV836787 K. Sato unpublished cDNA library: Hordeum vulgare subsp.
           vulgare seedling leaves second leaf stage Hordeum
           vulgare subsp. vulgare cDNA clone basd2p19, mRNA
           sequence
          Length = 696

 Score =  103 bits (219), Expect(4) = 2e-040
 Identities = 40/50 (80%), Positives = 46/50 (92%)
 Frame = -2 / -2

                                                             
Query: 674 GQETYIRVVDPNGGYNVTEMVAPDNMLYCGLLKDKQKAQKPHGSRSSASA 525
           GQETYIRVVDP+GGYNVTE V PDN L+CGLLK+KQKAQKPHGS SS+++
Sbjct: 560 GQETYIRVVDPDGGYNVTESVLPDNALFCGLLKEKQKAQKPHGSSSSSAS 411

 Score = 73.0 bits (153), Expect(3) = 7e-026
 Identities = 33/52 (63%), Positives = 37/52 (71%)
 Frame = +3 / +3

                                                               
Query: 543 RTMRLLSLLFILEEATVEHVVWSHHLSNIIASIWIHHPDVSLLTQIPRVQVF 698
           R MRLLSLLF LEEAT E VVW H  S++IAS+ IHHPDV LL +  R   F
Sbjct: 429 RPMRLLSLLFFLEEATEEGVVW*HRFSHVIASVRIHHPDVRLLARGTRCPDF 584

 Score = 63.4 bits (132), Expect(4) = 2e-040
 Identities = 23/26 (88%), Positives = 26/26 (100%)
 Frame = -2 / -3

                                     
Query: 773 TQVFPGAWTAVMLSLDSPGFWNVRTE 696
           ++VFPGAWTAV+LSLDSPGFWNVRTE
Sbjct: 661 SRVFPGAWTAVLLSLDSPGFWNVRTE 584

 Score = 57.4 bits (119), Expect(3) = 7e-026
 Identities = 23/25 (92%), Positives = 24/25 (96%)
 Frame = +1 / +3

                                    
Query: 694 FSVRTFQNPGLSSDSITAVHAPGNT 768
           FSVRTFQNPGLSSD+ TAVHAPGNT
Sbjct: 582 FSVRTFQNPGLSSDNRTAVHAPGNT 656

 Score = 30.4 bits (60), Expect(4) = 2e-040
 Identities = 10/10 (100%), Positives = 10/10 (100%)
 Frame = -2 / -1

                     
Query: 800 KWDGVSRCTT 771
           KWDGVSRCTT
Sbjct: 690 KWDGVSRCTT 661

 Score = 25.4 bits (49), Expect(4) = 2e-040
 Identities = 8/8 (100%), Positives = 8/8 (100%)
 Frame = -2 / -1

                   
Query: 695 NLDTWYLG 672
           NLDTWYLG
Sbjct: 582 NLDTWYLG 559

 Score = 24.9 bits (48), Expect(3) = 7e-026
 Identities = 9/11 (81%), Positives = 10/11 (90%)
 Frame = +1 / +2

                      
Query: 772 VVQRETPSHLL 804
           VVQRETPSH +
Sbjct: 662 VVQRETPSHFV 694
>gb|AL505038.1|AL505038 AL505038 Hordeum vulgare Barke roots Hordeum vulgare subsp. vulgare
           cDNA clone HW07D06V 5', mRNA sequence
          Length = 694

 Score =  146 bits (313), Expect = 2e-034
 Identities = 55/106 (51%), Positives = 76/106 (71%)
 Frame = -2 / +3

                                                                       
Query: 992 PTMPIDGPPVIRTSVINSTYKNFLEIVFQNNDSTVQTYHIDGYAFWVVGMDYGEWTENSR 813
           P  P  GP  ++TSV+ S  ++++E+VF+N +  VQ++HIDGYAFWVVGMD G+WT  SR
Sbjct: 18  PDSPSGGPAYLQTSVMASNMRDYVEVVFENAEGYVQSWHIDGYAFWVVGMDGGQWTPASR 197

                                                         
Query: 812 GTYNKWDGVSRCTTQVFPGAWTAVMLSLDSPGFWNVRTENLDTWYL 675
             YN  D ++R T QV+PGAWTA+ + LD+ G WNVR+E+    YL
Sbjct: 198 QNYNLRDAIARYTLQVYPGAWTAIYMPLDNVGMWNVRSESWGRQYL 335
>gb|BM098175.2|BM098175 EBpi03_SQ002_M05_R pistil, 4 DPA, no treatment, cv Optic, EBpi03
           Hordeum vulgare subsp. vulgare cDNA clone
           EBpi03_SQ002_M05 5', mRNA sequence
          Length = 525

 Score =  125 bits (267), Expect = 5e-028
 Identities = 48/58 (82%), Positives = 54/58 (93%)
 Frame = -2 / +2

                                                                     
Query: 698 ENLDTWYLGQETYIRVVDPNGGYNVTEMVAPDNMLYCGLLKDKQKAQKPHGSRSSASA 525
           ENLDTWYLGQETYIRVVDP+GGYNVTE V PDN L+CGLLK+KQKAQKPHGS SS+++
Sbjct: 2   ENLDTWYLGQETYIRVVDPDGGYNVTESVLPDNALFCGLLKEKQKAQKPHGSSSSSAS 175
  Database: Hordeum_nucl_with_EST.fasta
    Posted date:  Feb 7, 2006  2:16 PM
  Number of letters in database: 175,134,539
  Number of sequences in database:  312,970
  
Lambda     K      H
   0.318    0.134    0.401 


Matrix: BLOSUM62
Number of Hits to DB: 552,344,206
Number of Sequences: 312970
Number of extensions: 9288189
Number of successful extensions: 52835
Number of sequences better than 1.0e-020: 9
length of database: 58,378,179
effective HSP length: 52
effective length of database: 42,103,739
effective search space used: 12673225439
frameshift window, decay const: 40,  0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)