TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2276343.2.2
(1340 letters)
Database: Hordeum_nucl_with_EST.fasta
312,970 sequences; 175,134,539 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|AL503659.1|AL503659 AL503659 Hordeum vulgare Barke roots... 328 e-115
gb|BU986846.1|BU986846 HF13B07r HF Hordeum vulgare subsp. v... 377 e-104
gb|BM373009.2|BM373009 EBma04_SQ002_L18_R maternal, 10 DPA,... 364 e-100
gb|AV833509.1|AV833509 AV833509 K. Sato unpublished cDNA li... 336 2e-091
gb|BU985063.1|BU985063 HF06A11r HF Hordeum vulgare subsp. v... 331 6e-090
gb|BU971653.1|BU971653 HB19E05r BC Hordeum vulgare subsp. v... 309 3e-084
gb|BM368693.2|BM368693 EBem08_SQ004_F13_R embryo, 40 DPA, n... 305 3e-082
gb|BU985246.1|BU985246 HF06J02r HF Hordeum vulgare subsp. v... 297 7e-080
gb|BJ468329.1|BJ468329 BJ468329 K. Sato unpublished cDNA li... 204 4e-073
gb|CB876070.1|CB876070 HX10D01w HX Hordeum vulgare subsp. v... 237 3e-064
gb|CA025459.1|CA025459 HZ52D16r HZ Hordeum vulgare subsp. v... 234 1e-060
gb|CA032561.1|CA032561 HX13H09r HX Hordeum vulgare subsp. v... 232 5e-060
gb|BU972360.1|BU972360 HB21G23r BC Hordeum vulgare subsp. v... 227 8e-059
gb|CA021204.1|CA021204 HZ39G19r HZ Hordeum vulgare subsp. v... 209 2e-057
gb|BF256777.3|BF256777 HVSMEf0010P19f Hordeum vulgare seedl... 197 1e-049
gb|BE215462.1|BE215462 HV_CEb0006N21f Hordeum vulgare seedl... 168 5e-046
gb|BQ657817.1|BQ657817 HA06O04u HA Hordeum vulgare subsp. v... 170 1e-044
gb|BQ664626.1|BQ664626 HV04C11u HV Hordeum vulgare subsp. v... 168 6e-044
gb|CB876029.1|CB876029 HX10B04w HX Hordeum vulgare subsp. v... 166 3e-043
gb|BF616053.1|BF616053 HVSMEc0001F09f Hordeum vulgare seedl... 166 3e-040
gb|BU986511.1|BU986511 HF12B08r HF Hordeum vulgare subsp. v... 148 6e-038
gb|AL502574.1|AL502574 AL502574 Hordeum vulgare Barke roots... 154 1e-036
gb|AL501545.1|AL501545 AL501545 Hordeum vulgare Barke roots... 142 3e-036
gb|CA016485.1|CA016485 HV08K11u HV Hordeum vulgare subsp. v... 139 2e-035
gb|AJ460229.1|AJ460229 AJ460229 S00002 Hordeum vulgare subs... 148 8e-035
gb|BI952927.1|BI952927 HVSMEm0008H15f Hordeum vulgare green... 128 3e-032
gb|AV922348.1|AV922348 AV922348 K. Sato unpublished cDNA li... 127 4e-032
gb|BG310207.1|BG310207 HVSMEc0016H14f Hordeum vulgare seedl... 138 9e-032
gb|CA010606.1|CA010606 HT09H02u HT Hordeum vulgare subsp. v... 113 2e-024
>gb|AL503659.1|AL503659 AL503659 Hordeum vulgare Barke roots Hordeum vulgare subsp. vulgare
cDNA clone HW02P18T 5', mRNA sequence
Length = 696
Score = 328 bits (711), Expect(3) = e-115
Identities = 130/156 (83%), Positives = 143/156 (91%)
Frame = +1 / +3
Query: 229 AKPPLGVFFAAIAPRLQPRYYSISSSPKMAPSRIHVTCALVYGPSPTGRIHQGVCSTWMK 408
AKPPLGVFFAAIAPRLQPRYYSISSSP+MAP+RIHVTC+LV+G SPTGRIH+GVCSTWMK
Sbjct: 15 AKPPLGVFFAAIAPRLQPRYYSISSSPRMAPTRIHVTCSLVHGQSPTGRIHKGVCSTWMK 194
Query: 409 NTIPLEYSEECSWAPIFVRQSNFKLPADPSTPIIMIGPGTGLAPFRGFLQERLALKQSGA 588
N+ P E SEECSWAPIFVRQSNFKLPADP+ PIIM+GPGTGLAPFRGFLQERLALK++G
Sbjct: 195 NSTPSEESEECSWAPIFVRQSNFKLPADPTVPIIMVGPGTGLAPFRGFLQERLALKETGV 374
Query: 589 ELGTSILFFGCRNRNMDYIYEDELQTFLEEGALSEL 696
ELG +ILFFGCRNR MD+IYEDEL F E GALS +
Sbjct: 375 ELGRAILFFGCRNRQMDFIYEDELNNFTESGALSRV 482
Score = 251 bits (542), Expect(2) = 9e-079
Identities = 112/164 (68%), Positives = 125/164 (76%)
Frame = -1 / -3
Query: 719 PSRENATISSESAPSSRKVCNSSSYM*SILRFLHPKKRIEVPSSAPDCFSANLSCKKPLK 540
P + + + AP S K+ +SSSYM SI RFLHPK R+ PSS P F ANLSCKKPLK
Sbjct: 505 PHEKRQRPTRDRAPDSVKLFSSSSYMKSIWRFLHPKNRMARPSSTPVSFKANLSCKKPLK 326
Query: 539 GASPVPGPIMIIGVDGSAGNLKFDCLTNMGAQLHSSLYSRGIVFFIHVEQTPWWILPVGE 360
GA PVPGP +IIG GSAGNLKFDCLT +GAQLHSSL S G+ FFI VEQTP WILPVG
Sbjct: 325 GARPVPGPTIIIGTVGSAGNLKFDCLTKIGAQLHSSLSSDGVEFFIQVEQTPLWILPVGL 146
Query: 359 GP*TNAHVT*ILEGAIFGDDEIE*YRGCRRGAIAAKNTPSGGLA 228
P*T+ HVT*IL GAI G+++IE*Y G RRGAIAAK TPSGG A
Sbjct: 145 CP*TSEHVT*ILVGAILGEEDIE*YLG*RRGAIAAKKTPSGGFA 14
Score = 136 bits (292), Expect(3) = 2e-040
Identities = 69/141 (48%), Positives = 91/141 (64%)
Frame = -3 / -2
Query: 663 LQLIFIYVVHITVPASKEKD*SAQFCSRLFQC*PFLQEASKRSQPCPRTNHDNRSGWVSR 484
+QL+ +Y VH+ V A +E+D +AQF + LF * FL EA +R + PR H NR +S
Sbjct: 449 VQLVLVYEVHLAVSAPEEQDGTAQFHTSLF*S*SFL*EAPERCKASPRAYHYNRHCRISG 270
Query: 483 *LEI*LPHKYGSPAAFFAIFQRNCILHPC*TNSLVDPSCW*RPIN*CTCYMNSGGSHLWR 304
E+*LPHK SPAAFFA+F+ + ILHP TNS +DPS P+N* TCYMNS H W
Sbjct: 269 QFEV*LPHKNWSPAAFFALFRWS*ILHPSGTNSFMDPSSGALPMN**TCYMNSCWCHSW* 90
Query: 303 **N*VVSWLQTRSYCCEKHSQ 241
*VVS L+ RS C++ ++
Sbjct: 89 GRY*VVSRLKARSNSCKEDTK 27
Score = 135 bits (290), Expect(2) = 1e-037
Identities = 64/130 (49%), Positives = 84/130 (64%)
Frame = +3 / +2
Query: 258 SNSSSSATTILLNFIISKDGSLQNSCNMCISLWAFTNRKDPPRSLFNMDEEYNSSGI*RR 437
S SS + ILLN ++K+G+ +NSCNM S WA + KDP RSLF++DEE+NS G RR
Sbjct: 44 SYCSSPSAEILLNIFLTKNGTNKNSCNMFTSSWAKPHWKDP*RSLFHLDEEFNSIGRERR 223
Query: 438 MQLGSHICEAVKFQVTC*PIHSDYHDWSWDRAGSF*RLLAGKVSTETIWSRTGHFNPFLW 617
MQLGS+ CEAVK Q+ * + Y+ WD +F LL GK+S + W TG +P L
Sbjct: 224 MQLGSNFCEAVKLQIAR*SYSAYYNGRPWDWPCTFQGLLTGKISFKRDWCGTGPCHPVLR 403
Query: 618 MQEP*YGLHI 647
+Q+P GLHI
Sbjct: 404 VQKPPDGLHI 433
Score = 90.9 bits (192), Expect(3) = e-115
Identities = 33/44 (75%), Positives = 38/44 (86%)
Frame = +1 / +2
Query: 727 KEYVQHKMVEKATDIWNIISNGGYLYVCGDAKGMARDVHKMLHT 858
K VQHKM EKA D+W+I+S GGY+YVCGDAKGMARDVH+ LHT
Sbjct: 515 KSTVQHKMAEKAADLWSIVSQGGYVYVCGDAKGMARDVHRALHT 646
Score = 86.8 bits (183), Expect(3) = 7e-026
Identities = 44/72 (61%), Positives = 48/72 (66%)
Frame = +2 / +1
Query: 266 LLVCNHDTTQFHHLQRWLPPEFM*HVH*FMGLHQQEGSTKEFVQHG*RIQFLWNIAKNAA 445
LL + DTTQ+ Q W EFM*HVH*FMG EGS KEFV G*RIQ AKNAA
Sbjct: 52 LLAFSRDTTQYLPHQEWHQQEFM*HVH*FMGKAPLEGSIKEFVPLG*RIQLHRKRAKNAA 231
Query: 446 GLPYL*GSQISS 481
GL +L*GSQ S+
Sbjct: 232 GLQFL*GSQTSN 267
Score = 81.3 bits (171), Expect(3) = 3e-022
Identities = 44/80 (55%), Positives = 52/80 (65%)
Frame = -2 / -1
Query: 490 QQVT*NLTASQIWEPSCILRYIPEELYSSSMLNKLLGGSFLLVKAHKLMHMLHEFWREPS 311
Q+ *+LTASQ EPSCILR +P EL SSS NKLL GSF AH+L++MLHEF P
Sbjct: 276 QRAI*SLTASQKLEPSCILRSLPMELNSSSKWNKLLYGSFQWGFAHELVNMLHEFLLVPF 97
Query: 310 LEMMKLSSIVVADEELLLRK 251
L LSSI EE L++
Sbjct: 96 LVRKILSSISAEGEEQ*LQR 37
Score = 63.8 bits (133), Expect(2) = 9e-079
Identities = 28/42 (66%), Positives = 30/42 (71%)
Frame = -1 / -1
Query: 851 SILCTSLAIPLASPQTYK*PPFEMMFQISVAFSTILCCTYSF 726
S CTSLA+PLASPQTY *PP+E M S AFS ILC T F
Sbjct: 639 SARCTSLAMPLASPQTYT*PPWETMLHRSAAFSAILCWTVLF 514
Score = 41.8 bits (85), Expect(2) = 1e-037
Identities = 16/37 (43%), Positives = 23/37 (62%)
Frame = +3 / +1
Query: 747 DGGKGHRYLEHHLKWWLLICLR*CQGNG*RCTQNASY 857
+G +G R +EH WL +CLR CQG+G R A++
Sbjct: 535 NGREGCRSMEHSFPGWLCVCLRRCQGHGERRAPRAAH 645
Score = 37.3 bits (75), Expect(3) = e-115
Identities = 14/15 (93%), Positives = 15/15 (100%)
Frame = +1 / +1
Query: 691 ELIVAFSREGPTKEY 735
EL+VAFSREGPTKEY
Sbjct: 478 ELVVAFSREGPTKEY 522
Score = 36.8 bits (74), Expect(3) = 2e-040
Identities = 15/35 (42%), Positives = 23/35 (65%)
Frame = -3 / -3
Query: 843 VYISSHSLGITANI*VTTI*DDVPNICGLFHHLML 739
V++S H+LGI A+I + T+ + P IC L H +L
Sbjct: 631 VHVSRHALGIAADIHIATLGNYAP*ICSLLCHFVL 527
Score = 36.3 bits (73), Expect(3) = 7e-026
Identities = 21/46 (45%), Positives = 24/46 (52%)
Frame = +2 / +1
Query: 521 LGQGWLLLEASCRKG*H*NNLEQNWALQSFSLDAGTVIWTTYMKMS 658
LG L AS RK * * L NWA+ S S A T WT+Y + S
Sbjct: 307 LGLALHLSGASYRKD*L*KRLVWNWAVPSCSSGAETARWTSYTRTS 444
Score = 32.7 bits (65), Expect(3) = 7e-026
Identities = 14/33 (42%), Positives = 17/33 (51%)
Frame = +2 / +3
Query: 746 RWWKRPQIFGTSSQMVVTYMFAVMPREWLEMYT 844
+W +R QI+G V M A MPR W E T
Sbjct: 534 KWQRRLQIYGA*FPRVAMCMSAAMPRAWRETCT 632
Score = 31.8 bits (63), Expect(3) = 3e-022
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = -2 / -2
Query: 829 PFPWHHRKHISNHHLR*CSKYLWPFPP 749
P PWH R+H +H + CS L P P
Sbjct: 617 PCPWHRRRHTHSHPGKLCSIDLQPSLP 537
Score = 31.3 bits (62), Expect(3) = 2e-040
Identities = 14/24 (58%), Positives = 15/24 (62%)
Frame = -1 / -2
Query: 734 YSFVGPSRENATISSESAPSSRKV 663
YSFVGPSRE AT +S KV
Sbjct: 521 YSFVGPSREKATTNSGQGSRFGKV 450
Score = 30.4 bits (60), Expect(3) = 3e-022
Identities = 18/40 (45%), Positives = 20/40 (50%)
Frame = -2 / -1
Query: 640 SPYYGSCIQRKGLKCPVLLQIVSVLTFPARSL*KEPALSQ 521
SP G C +R G PV Q + L FP RS *K SQ
Sbjct: 426 SPSGGFCTRRTGWHGPVPHQSLLKLIFPVRSP*KVQGQSQ 307
>gb|BU986846.1|BU986846 HF13B07r HF Hordeum vulgare subsp. vulgare cDNA clone HF13B07
5-PRIME, mRNA sequence
Length = 552
Score = 377 bits (817), Expect = e-104
Identities = 151/181 (83%), Positives = 167/181 (92%)
Frame = +1 / +1
Query: 169 SQWITASQRSLLEVMAAFPSAKPPLGVFFAAIAPRLQPRYYSISSSPKMAPSRIHVTCAL 348
+QWI ASQRSLLEV++ FPSAKPPLGVFFAAIAPRLQPRYYSISSSP+MAP+RIHVTC+L
Sbjct: 10 AQWIIASQRSLLEVISEFPSAKPPLGVFFAAIAPRLQPRYYSISSSPRMAPTRIHVTCSL 189
Query: 349 VYGPSPTGRIHQGVCSTWMKNTIPLEYSEECSWAPIFVRQSNFKLPADPSTPIIMIGPGT 528
V+G SPTGRIH+GVCSTWMKN+ P E SEECSWAPIFVRQSNFKLPADP+ PIIM+GPGT
Sbjct: 190 VHGQSPTGRIHKGVCSTWMKNSTPSEESEECSWAPIFVRQSNFKLPADPTVPIIMVGPGT 369
Query: 529 GLAPFRGFLQERLALKQSGAELGTSILFFGCRNRNMDYIYEDELQTFLEEGALSELIVAF 708
GLAPFRGFLQERLALK++G ELG +ILFFGCRNR MD+IYEDEL F E GALSEL+VAF
Sbjct: 370 GLAPFRGFLQERLALKETGVELGRAILFFGCRNRQMDFIYEDELNNFTESGALSELVVAF 549
Query: 709 S 711
S
Sbjct: 550 S 552
Score = 289 bits (625), Expect = 3e-077
Identities = 129/180 (71%), Positives = 145/180 (80%)
Frame = -1 / -2
Query: 710 ENATISSESAPSSRKVCNSSSYM*SILRFLHPKKRIEVPSSAPDCFSANLSCKKPLKGAS 531
E AT +S+ AP S K+ +SSSYM SI RFLHPK R+ PSS P F ANLSCKKPLKGA
Sbjct: 551 EKATTNSDRAPDSVKLFSSSSYMKSIWRFLHPKNRMARPSSTPVSFKANLSCKKPLKGAR 372
Query: 530 PVPGPIMIIGVDGSAGNLKFDCLTNMGAQLHSSLYSRGIVFFIHVEQTPWWILPVGEGP* 351
PVPGP +IIG GSAGNLKFDCLT +GAQLHSSL S G+ FFI VEQTP WILPVG P*
Sbjct: 371 PVPGPTIIIGTVGSAGNLKFDCLTKIGAQLHSSLSSDGVEFFIQVEQTPLWILPVGLCP* 192
Query: 350 TNAHVT*ILEGAIFGDDEIE*YRGCRRGAIAAKNTPSGGLAEGNAAITSRRLL*LAVIH* 171
T+ HVT*IL GAI G+++IE*Y G RRGAIAAK TPSGG A+GN+ ITS+RLL*LA+IH*
Sbjct: 191 TSEHVT*ILVGAILGEEDIE*YLG*RRGAIAAKKTPSGGFADGNSEITSKRLL*LAIIH* 12
Score = 156 bits (335), Expect = 3e-037
Identities = 82/183 (44%), Positives = 114/183 (62%)
Frame = -3 / -1
Query: 711 RECNN*LRKRPLLKESLQLIFIYVVHITVPASKEKD*SAQFCSRLFQC*PFLQEASKRSQ 532
R+ N+ L + + +QL+ +Y VH+ V A +E+D +AQF + LF * FL EA +R +
Sbjct: 552 RKGNDQLGQGSRFGKVVQLVLVYEVHLAVSAPEEQDGTAQFHTSLF*S*SFL*EAPERCK 373
Query: 531 PCPRTNHDNRSGWVSR*LEI*LPHKYGSPAAFFAIFQRNCILHPC*TNSLVDPSCW*RPI 352
PR H NR +S E+*LPHK SPAAFFA+F+ + ILHP TNS +DPS P+
Sbjct: 372 ASPRAYHYNRHCRISGQFEV*LPHKNWSPAAFFALFRWS*ILHPSGTNSFMDPSSGALPM 193
Query: 351 N*CTCYMNSGGSHLWR**N*VVSWLQTRSYCCEKHSQWWLS*RECSHNFKKTPLTSSYPL 172
N* TCYMNS H W *VVS L+ RS C++ ++ * + +NF++T LTS YPL
Sbjct: 192 N**TCYMNSCWCHSW*GRY*VVSRLKARSNSCKEDTKRRFR*WKLRNNFQETSLTSDYPL 13
Query: 171 RIL 163
++
Sbjct: 12 SLV 4
Score = 138 bits (295), Expect = 9e-032
Identities = 69/159 (43%), Positives = 93/159 (58%)
Frame = +3 / +3
Query: 171 SMDNCXXXXXXXXYGCIPFS*ATTGSVFRSNSSSSATTILLNFIISKDGSLQNSCNMCIS 350
S+DN Y + S + + S SS + ILLN ++K+G+ +NSCNM S
Sbjct: 12 SVDNR*SKKSLGSYFGVSISETSAWCLLCSYCSSPSAEILLNIFLTKNGTNKNSCNMFTS 191
Query: 351 LWAFTNRKDPPRSLFNMDEEYNSSGI*RRMQLGSHICEAVKFQVTC*PIHSDYHDWSWDR 530
WA + KDP RSLF++DEE+NS G RRMQLGS+ CEAVK Q+ * + Y+ WD
Sbjct: 192 SWAKPHWKDP*RSLFHLDEEFNSIGRERRMQLGSNFCEAVKLQIAR*SYSAYYNGRPWDW 371
Query: 531 AGSF*RLLAGKVSTETIWSRTGHFNPFLWMQEP*YGLHI 647
+F LL GK+S + W TG +P L +Q+P GLHI
Sbjct: 372 PCTFQGLLTGKISFKRDWCGTGPCHPVLRVQKPPDGLHI 488
Score = 86.8 bits (183), Expect(2) = 2e-021
Identities = 44/72 (61%), Positives = 48/72 (66%)
Frame = +2 / +2
Query: 266 LLVCNHDTTQFHHLQRWLPPEFM*HVH*FMGLHQQEGSTKEFVQHG*RIQFLWNIAKNAA 445
LL + DTTQ+ Q W EFM*HVH*FMG EGS KEFV G*RIQ AKNAA
Sbjct: 107 LLAFSRDTTQYLPHQEWHQQEFM*HVH*FMGKAPLEGSIKEFVPLG*RIQLHRKRAKNAA 286
Query: 446 GLPYL*GSQISS 481
GL +L*GSQ S+
Sbjct: 287 GLQFL*GSQTSN 322
Score = 36.3 bits (73), Expect(2) = 2e-021
Identities = 21/46 (45%), Positives = 24/46 (52%)
Frame = +2 / +2
Query: 521 LGQGWLLLEASCRKG*H*NNLEQNWALQSFSLDAGTVIWTTYMKMS 658
LG L AS RK * * L NWA+ S S A T WT+Y + S
Sbjct: 362 LGLALHLSGASYRKD*L*KRLVWNWAVPSCSSGAETARWTSYTRTS 499
>gb|BM373009.2|BM373009 EBma04_SQ002_L18_R maternal, 10 DPA, no treatment, cv Optic, EBma04
Hordeum vulgare subsp. vulgare cDNA clone
EBma04_SQ002_L18 5', mRNA sequence
Length = 570
Score = 364 bits (789), Expect = e-100
Identities = 145/167 (86%), Positives = 162/167 (97%)
Frame = +1 / +2
Query: 454 IFVRQSNFKLPADPSTPIIMIGPGTGLAPFRGFLQERLALKQSGAELGTSILFFGCRNRN 633
IFVRQSNF+LPADPSTPIIMIGPGTGLAPFRGFLQERLALK+SG ELG+S+LFFGCRNR+
Sbjct: 2 IFVRQSNFRLPADPSTPIIMIGPGTGLAPFRGFLQERLALKESGVELGSSVLFFGCRNRD 181
Query: 634 MDYIYEDELQTFLEEGALSELIVAFSREGPTKEYVQHKMVEKATDIWNIISNGGYLYVCG 813
MDYIYEDEL FL+EGALSELIVA+SREGPTKEYVQHKM++KAT+IWN+IS GGY+YVCG
Sbjct: 182 MDYIYEDELLNFLQEGALSELIVAYSREGPTKEYVQHKMIDKATEIWNVISQGGYIYVCG 361
Query: 814 DAKGMARDVHKMLHTIVQEQGSLDNSKTESYVKSLQMEGRYLRDVW* 954
DAKGMA+DVH++LHTIVQ+QGSLDNSKTE YVK+LQMEGRYLRDVW*
Sbjct: 362 DAKGMAKDVHRVLHTIVQKQGSLDNSKTELYVKNLQMEGRYLRDVW* 502
Score = 307 bits (665), Expect = 8e-083
Identities = 132/168 (78%), Positives = 142/168 (84%)
Frame = -1 / -1
Query: 956 CHHTSRRYLPSICRLFT*LSVLELSKDPCSWTIV*SILCTSLAIPLASPQTYK*PPFEMM 777
C+HTSRRYLPSICR FT SV ELSKDPC TIV* LCTS A+PLASPQTY *PP EM
Sbjct: 504 CYHTSRRYLPSICRFFTYSSVFELSKDPCF*TIV*RTLCTSFAMPLASPQTYM*PP*EMT 325
Query: 776 FQISVAFSTILCCTYSFVGPSRENATISSESAPSSRKVCNSSSYM*SILRFLHPKKRIEV 597
FQISVA S ILCCTYS VGPSRE ATISSESAPS RK NSSSY+*S+ RFLHPKK E+
Sbjct: 324 FQISVALSIILCCTYSLVGPSREYATISSESAPS*RKFSNSSSYI*SMSRFLHPKKSTEL 145
Query: 596 PSSAPDCFSANLSCKKPLKGASPVPGPIMIIGVDGSAGNLKFDCLTNM 453
P+S PD F A+LSCKKPLKGASPVPGPIM++GVDGSAGNLKFDCLT +
Sbjct: 144 PNSTPDSFRASLSCKKPLKGASPVPGPIMMMGVDGSAGNLKFDCLTKI 1
Score = 233 bits (504), Expect = 1e-060
Identities = 106/169 (62%), Positives = 127/169 (75%)
Frame = -3 / -3
Query: 963 GDVSPYITEVPSFHLQALYIALGFGVIQRSLLLDYCMKHFVYISSHSLGITANI*VTTI* 784
G + P+ITEVP+FHL LYI LGF VIQRSLLL+YC+K+ VYI H+LGIT NI VTT+
Sbjct: 511 GVLLPHITEVPAFHL*VLYIQLGFRVIQRSLLLNYCVKNPVYILRHALGITTNIYVTTLR 332
Query: 783 DDVPNICGLFHHLMLHIFFRWPFPRECNN*LRKRPLLKESLQLIFIYVVHITVPASKEKD 604
DDVPN+ GL +HLMLHIFF W F R +N*L + P LKE LI +Y+VH+ VPASKE+
Sbjct: 331 DDVPNLGGLVNHLMLHIFFGWSFTRVRDN*LGECPFLKEI**LILVYIVHVAVPASKEEH 152
Query: 603 *SAQFCSRLFQC*PFLQEASKRSQPCPRTNHDNRSGWVSR*LEI*LPHK 457
*+AQF SR F * FLQ+A KR PRTNHD+ SGW+ R +I*LPHK
Sbjct: 151 *TAQFNSRFF*S*SFLQKAPKRC*SSPRTNHDDGSGWICRQPKI*LPHK 5
Score = 227 bits (491), Expect = 8e-059
Identities = 98/166 (59%), Positives = 115/166 (69%)
Frame = +3 / +1
Query: 459 CEAVKFQVTC*PIHSDYHDWSWDRAGSF*RLLAGKVSTETIWSRTGHFNPFLWMQEP*YG 638
CEAVKF V C IHS +HDWSWD +F* L AGK S++ IWS G F+ LWMQEP +G
Sbjct: 7 CEAVKF*VACRSIHSHHHDWSWDWTSTF*GLFAGKTSSKRIWS*IGQFSALLWMQEPRHG 186
Query: 639 LHI*R*VXXXXXXXXXXXXXCCILSGRANERICAA*DGGKGHRYLEHHLKWWLLICLR*C 818
L+I *V C +LS R N+RICAA*D +GHR LE HL WL ICL *C
Sbjct: 187 LYIRG*VTKFPSGRGTLRANCRVLS*RTNQRICAA*DD*QGHRDLERHLSRWLHICLW*C 366
Query: 819 QGNG*RCTQNASYNSPRAGIFG*LQNRELCKEPADGRKVPP*CMVT 956
QG+G CTQ +S+NS AGIFG*L+NR +CKEP DGR+VPP*C+VT
Sbjct: 367 QGHGEGCTQGSSHNSSEAGIFG*LENRAVCKEPTDGRQVPP*CVVT 504
Score = 227 bits (490), Expect = 1e-058
Identities = 104/166 (62%), Positives = 114/166 (68%)
Frame = -2 / -2
Query: 955 VTIHHGGTFLPSAGSLHSSRFWSYPKIPALGLLYEAFCVHL*PFPWHHRKHISNHHLR*C 776
VT HHGGT LPS GSLH++RF SYPKIPA LL E CVH P PWHH KHI NH R*
Sbjct: 503 VTTHHGGTCLPSVGSLHTARFSSYPKIPASELLCEEPCVHPSPCPWHHHKHICNHLER*R 324
Query: 775 SKYLWPFPPSYAAHILSLALPERMQQLAQKAPPPQGKFATHLHICSPYYGSCIQRKGLKC 596
SK WP SYAAHIL L L E +QLA++ P P+G TH I SP GSCIQR+ L C
Sbjct: 323 SKSRWPCQSSYAAHILWLVLHESTRQLARRVPLPEGNLVTHPRIYSPCRGSCIQRRALNC 144
Query: 595 PVLLQIVSVLTFPARSL*KEPALSQDQS**SEWMGQQVT*NLTASQ 458
P+ LQI+ L FPA+S *K SQDQS** EWM Q T*NLTASQ
Sbjct: 143 PIQLQILLELVFPAKSP*KVLVQSQDQS**WEWMDLQAT*NLTASQ 6
Score = 125 bits (267), Expect(2) = 1e-046
Identities = 55/84 (65%), Positives = 59/84 (70%)
Frame = +2 / +3
Query: 716 KGQRKNMCSIRWWKRPQIFGTSSQMVVTYMFAVMPREWLEMYTKCFIQ*SKSRDLWITPK 895
K Q KNMCSIR RP FGTSS VVTYMF VMPR W MYT F Q* +SRDLWIT K
Sbjct: 264 KDQPKNMCSIR*LTRPPRFGTSSLKVVTYMFVVMPRAWRRMYTGFFTQ*FRSRDLWITRK 443
Query: 896 PRAM*RACRWKEGTSVMYGDTSPQ 967
P M*R RWK GTSVM G+ +P+
Sbjct: 444 PSCM*RTYRWKAGTSVMCGNNTPR 515
Score = 82.6 bits (174), Expect(2) = 1e-046
Identities = 42/68 (61%), Positives = 45/68 (66%)
Frame = +2 / +3
Query: 455 YL*GSQISSYLLTHPLRLS*LVLGQGWLLLEASCRKG*H*NNLEQNWALQSFSLDAGTVI 634
+L*GSQI L HPL S*LVLG LL A CRK * * NLE NWA+Q SLDAGT
Sbjct: 3 FL*GSQILGCLQIHPLPSS*LVLGLD*HLLGAFCRKD*L*KNLELNWAVQCSSLDAGTAT 182
Query: 635 WTTYMKMS 658
WT Y +MS
Sbjct: 183 WTIYTRMS 206
>gb|AV833509.1|AV833509 AV833509 K. Sato unpublished cDNA library: Hordeum vulgare subsp.
vulgare shoots germination Hordeum vulgare subsp.
vulgare cDNA clone bags13p18, mRNA sequence
Length = 431
Score = 336 bits (727), Expect = 2e-091
Identities = 134/143 (93%), Positives = 141/143 (98%)
Frame = +1 / +2
Query: 130 LRFLASPAGKDEYSQWITASQRSLLEVMAAFPSAKPPLGVFFAAIAPRLQPRYYSISSSP 309
LRFLASPAGKDEY+QWI ASQRSLLEVMAAFPSAKPPLGVFFAA+APRLQPR+YSISSSP
Sbjct: 2 LRFLASPAGKDEYAQWIVASQRSLLEVMAAFPSAKPPLGVFFAAVAPRLQPRFYSISSSP 181
Query: 310 KMAPSRIHVTCALVYGPSPTGRIHQGVCSTWMKNTIPLEYSEECSWAPIFVRQSNFKLPA 489
K+APSRIHVTCALVYGP+PT RIHQGVCSTWMKNT+PLEYSEECSWAPIFVRQSNF+LPA
Sbjct: 182 KLAPSRIHVTCALVYGPTPTERIHQGVCSTWMKNTLPLEYSEECSWAPIFVRQSNFRLPA 361
Query: 490 DPSTPIIMIGPGTGLAPFRGFLQ 558
DPSTPIIMIGPGTGLAPFRGFLQ
Sbjct: 362 DPSTPIIMIGPGTGLAPFRGFLQ 430
Score = 295 bits (639), Expect = 3e-079
Identities = 125/142 (88%), Positives = 130/142 (91%)
Frame = -1 / -3
Query: 557 CKKPLKGASPVPGPIMIIGVDGSAGNLKFDCLTNMGAQLHSSLYSRGIVFFIHVEQTPWW 378
CKKPLKGASPVPGPIM++GVDGSAGNLKFDCLT +GAQLHSSLYS G VFFIHVEQTPWW
Sbjct: 429 CKKPLKGASPVPGPIMMMGVDGSAGNLKFDCLTKIGAQLHSSLYSSGSVFFIHVEQTPWW 250
Query: 377 ILPVGEGP*TNAHVT*ILEGAIFGDDEIE*YRGCRRGAIAAKNTPSGGLAEGNAAITSRR 198
IL VG GP*TNAHVT*ILEGA FGDD++E* RGCRRGA AAKNTP GGLAEGNAAITSRR
Sbjct: 249 ILSVGVGP*TNAHVT*ILEGANFGDDDME*NRGCRRGATAAKNTPKGGLAEGNAAITSRR 70
Query: 197 LL*LAVIH*EYSSFPAGEAKNL 132
LL LA IH* YSSFPAGEAKNL
Sbjct: 69 LLWLATIH*AYSSFPAGEAKNL 4
Score = 225 bits (486), Expect = 4e-058
Identities = 98/143 (68%), Positives = 108/143 (75%)
Frame = -3 / -2
Query: 558 LQEASKRSQPCPRTNHDNRSGWVSR*LEI*LPHKYGSPAAFFAIFQRNCILHPC*TNSLV 379
LQ+A KR PRTNHD+ SGW+ R +I*LPHK P AFFAIFQ C+LHPC TNSLV
Sbjct: 430 LQKAPKRC*SSPRTNHDDGSGWICRQPKI*LPHKNRCPTAFFAIFQWKCVLHPCRTNSLV 251
Query: 378 DPSCW*RPIN*CTCYMNSGGSHLWR**N*VVSWLQTRSYCCEKHSQWWLS*RECSHNFKK 199
DP CW RPIN*CT YMNS GS LWR** V SWL TRSY C+++ Q S*RECSHNFKK
Sbjct: 250 DPFCWCRPIN*CTRYMNSRGSQLWR**YGVESWL*TRSYRCKEYPQGRFS*RECSHNFKK 71
Query: 198 TPLTSSYPLRILILSSRRGQEPK 130
PL S YPL ILILSSRR Q+P+
Sbjct: 70 APLASYYPLSILILSSRRSQKPQ 2
Score = 216 bits (467), Expect = 2e-055
Identities = 94/143 (65%), Positives = 105/143 (73%)
Frame = +3 / +1
Query: 129 T*VLGLSCWKG*VFSMDNCXXXXXXXXYGCIPFS*ATTGSVFRSNSSSSATTILLNFIIS 308
T V G SCWKG*V SMD+ YGCIPFS* G + S SSSS TILL+ IIS
Sbjct: 1 TEVFGFSCWKG*VCSMDSS*PEEPS*SYGCIPFS*TALGGILCSGSSSSTATILLHIIIS 180
Query: 309 KDGSLQNSCNMCISLWAFTNRKDPPRSLFNMDEEYNSSGI*RRMQLGSHICEAVKFQVTC 488
K GSL NSCN+CISLWA+TNRKDPPRSLF+MDEE+ S+GI*RRMQLG+ CEAVKF V C
Sbjct: 181 KVGSL*NSCNVCISLWAYTNRKDPPRSLFDMDEEHTSTGI*RRMQLGTDFCEAVKF*VAC 360
Query: 489 *PIHSDYHDWSWDRAGSF*RLLA 557
IHS +HDWSWD +F* L A
Sbjct: 361 RSIHSHHHDWSWDWTSTF*GLFA 429
Score = 207 bits (446), Expect = 1e-052
Identities = 101/142 (71%), Positives = 110/142 (77%)
Frame = -2 / -1
Query: 559 PARSL*KEPALSQDQS**SEWMGQQVT*NLTASQIWEPSCILRYIPEELYSSSMLNKLLG 380
PA+S *K SQDQS** EWM Q T*NLTASQ P+CILRYIP E+ SSSM NKLLG
Sbjct: 431 PAKSP*KVLVQSQDQS**WEWMDLQAT*NLTASQKSVPNCILRYIPVEVCSSSMSNKLLG 252
Query: 379 GSFLLVKAHKLMHMLHEFWREPSLEMMKLSSIVVADEELLLRKTLPVVA*LKGMQP*LQE 200
GSFLLV AHKLMH LHEF REP+LEMM S IV DEEL L++ P *LKGMQP*LQE
Sbjct: 251 GSFLLV*AHKLMHTLHEF*REPTLEMMIWSRIVAVDEELPLQRIPPRAV*LKGMQP*LQE 72
Query: 199 DSSD*QLSIENTHPFQQERPRT 134
SS * LSIE+THPFQQE+P+T
Sbjct: 71 GSSG*LLSIEHTHPFQQEKPKT 6
Score = 152 bits (326), Expect(2) = 1e-041
Identities = 70/101 (69%), Positives = 77/101 (76%)
Frame = +2 / +3
Query: 257 QQ*LLVCNHDTTQFHHLQRWLPPEFM*HVH*FMGLHQQEGSTKEFVQHG*RIQFLWNIAK 436
Q+*LLV +HD+T +HHLQ WLP EFM* VH*FMGLHQQ+GSTKEFV+HG*R F WNIAK
Sbjct: 129 QR*LLVYSHDSTPYHHLQSWLPLEFM*RVH*FMGLHQQKGSTKEFVRHG*RTHFHWNIAK 308
Query: 437 NAAGLPYL*GSQISSYLLTHPLRLS*LVLGQGWLLLEASCR 559
NA G +L*GSQI L HPL S*LVLG LL A CR
Sbjct: 309 NAVGHRFL*GSQILGCLQIHPLPSS*LVLGLD*HLLGAFCR 431
Score = 38.6 bits (78), Expect(2) = 1e-041
Identities = 17/23 (73%), Positives = 18/23 (78%)
Frame = +2 / +3
Query: 134 GSWPLLLERMSILNG*LLVRGVF 202
G W LLLERMS+LNG* L RG F
Sbjct: 6 GFWLLLLERMSMLNG**LARGAF 74
>gb|BU985063.1|BU985063 HF06A11r HF Hordeum vulgare subsp. vulgare cDNA clone HF06A11
5-PRIME, mRNA sequence
Length = 611
Score = 331 bits (717), Expect = 6e-090
Identities = 136/168 (80%), Positives = 143/168 (85%)
Frame = +1 / +1
Query: 22 TLRTALLRYXXXXXXXXXXXXXXXXXXXXXXXEAERLRFLASPAGKDEYSQWITASQRSL 201
TLRTALLRY EAERLRFLASPAGKDEY+QWI ASQRSL
Sbjct: 106 TLRTALLRYADLLNSPKKAALTALAAHASDPAEAERLRFLASPAGKDEYAQWIVASQRSL 285
Query: 202 LEVMAAFPSAKPPLGVFFAAIAPRLQPRYYSISSSPKMAPSRIHVTCALVYGPSPTGRIH 381
LEVMAAFPSAKPPLGVFFAA+APRLQPR+YSISSSPK+APSRIHVTCALVYGP+PT RIH
Sbjct: 286 LEVMAAFPSAKPPLGVFFAAVAPRLQPRFYSISSSPKLAPSRIHVTCALVYGPTPTERIH 465
Query: 382 QGVCSTWMKNTIPLEYSEECSWAPIFVRQSNFKLPADPSTPIIMIGPG 525
QGVCSTWMKNT+PLEYSEECSWAPIFVRQSNF+LPADPSTPIIMIGPG
Sbjct: 466 QGVCSTWMKNTLPLEYSEECSWAPIFVRQSNFRLPADPSTPIIMIGPG 609
Score = 300 bits (650), Expect = 1e-080
Identities = 132/169 (78%), Positives = 138/169 (81%)
Frame = -1 / -1
Query: 527 VPGPIMIIGVDGSAGNLKFDCLTNMGAQLHSSLYSRGIVFFIHVEQTPWWILPVGEGP*T 348
VPGPIM++GVDGSAGNLKFDCLT +GAQLHSSLYS G VFFIHVEQTPWWIL VG GP*T
Sbjct: 611 VPGPIMMMGVDGSAGNLKFDCLTKIGAQLHSSLYSSGSVFFIHVEQTPWWILSVGVGP*T 432
Query: 347 NAHVT*ILEGAIFGDDEIE*YRGCRRGAIAAKNTPSGGLAEGNAAITSRRLL*LAVIH*E 168
NAHVT*ILEGA FGDD++E* RGCRRGA AAKNTP GGLAEGNAAITSRRLL LA IH*
Sbjct: 431 NAHVT*ILEGANFGDDDME*NRGCRRGATAAKNTPKGGLAEGNAAITSRRLLWLATIH*A 252
Query: 167 YSSFPAGEAKNLXXXXXXXXXXXXXXXXXXAFFGGLSRSAYRRSAVRKV 21
YSSFPAGEAKNL AFFG LS+SAYRRSAVRKV
Sbjct: 251 YSSFPAGEAKNLSRSASAGSEA*AAKAVKAAFFGELSKSAYRRSAVRKV 105
Score = 267 bits (578), Expect = 8e-071
Identities = 120/169 (71%), Positives = 131/169 (77%)
Frame = -3 / -3
Query: 525 PRTNHDNRSGWVSR*LEI*LPHKYGSPAAFFAIFQRNCILHPC*TNSLVDPSCW*RPIN* 346
PRTNHD+ SGW+ R +I*LPHK P AFFAIFQ C+LHPC TNSLVDP CW RPIN*
Sbjct: 609 PRTNHDDGSGWICRQPKI*LPHKNRCPTAFFAIFQWKCVLHPCRTNSLVDPFCWCRPIN* 430
Query: 345 CTCYMNSGGSHLWR**N*VVSWLQTRSYCCEKHSQWWLS*RECSHNFKKTPLTSSYPLRI 166
CT YMNS GS LWR** V SWL TRSY C+++ Q S*RECSHNFKK PL S YPL I
Sbjct: 429 CTRYMNSRGSQLWR**YGVESWL*TRSYRCKEYPQGRFS*RECSHNFKKAPLASYYPLSI 250
Query: 165 LILSSRRGQEPKSFSFSWIRCMRS*SKQSSLLRWIE*ISIS*KRSPQGT 19
LILSSRR Q+P+SFSFSW+R M S*S QSSLL IE*+SIS*K S GT
Sbjct: 249 LILSSRRSQKPQSFSFSWVRSMSS*SSQSSLLWRIE*VSIS*KCSS*GT 103
Score = 256 bits (553), Expect = 2e-067
Identities = 122/169 (72%), Positives = 133/169 (78%)
Frame = -2 / -2
Query: 526 SQDQS**SEWMGQQVT*NLTASQIWEPSCILRYIPEELYSSSMLNKLLGGSFLLVKAHKL 347
SQDQS** EWM Q T*NLTASQ P+CILRYIP E+ SSSM NKLLGGSFLLV AHKL
Sbjct: 610 SQDQS**WEWMDLQAT*NLTASQKSVPNCILRYIPVEVCSSSMSNKLLGGSFLLV*AHKL 431
Query: 346 MHMLHEFWREPSLEMMKLSSIVVADEELLLRKTLPVVA*LKGMQP*LQEDSSD*QLSIEN 167
MH LHEF REP+LEMM S IV DEEL L++ P *LKGMQP*LQE SS * LSIE+
Sbjct: 430 MHTLHEF*REPTLEMMIWSRIVAVDEELPLQRIPPRAV*LKGMQP*LQEGSSG*LLSIEH 251
Query: 166 THPFQQERPRT*VVQLQLDQMHEKLKQAKQPSSVD*VDQHIVEAQSARY 20
THPFQQE+P+T VVQLQL Q HE+LKQ+KQPS +*V QHIVE Q RY
Sbjct: 250 THPFQQEKPKTSVVQLQLGQKHEQLKQSKQPSLAN*VSQHIVEVQFVRY 104
Score = 214 bits (462), Expect(2) = 2e-058
Identities = 92/135 (68%), Positives = 102/135 (75%)
Frame = +3 / +3
Query: 123 *TT*VLGLSCWKG*VFSMDNCXXXXXXXXYGCIPFS*ATTGSVFRSNSSSSATTILLNFI 302
*TT V G SCWKG*V SMD+ YGCIPFS* G + S SSSS TILL+ I
Sbjct: 207 *TTEVFGFSCWKG*VCSMDSS*PEEPS*SYGCIPFS*TALGGILCSGSSSSTATILLHII 386
Query: 303 ISKDGSLQNSCNMCISLWAFTNRKDPPRSLFNMDEEYNSSGI*RRMQLGSHICEAVKFQV 482
ISK GSL NSCN+CISLWA+TNRKDPPRSLF+MDEE+ S+GI*RRMQLG+ CEAVKF V
Sbjct: 387 ISKVGSL*NSCNVCISLWAYTNRKDPPRSLFDMDEEHTSTGI*RRMQLGTDFCEAVKF*V 566
Query: 483 TC*PIHSDYHDWSWD 527
C IHS +HDWSWD
Sbjct: 567 ACRSIHSHHHDWSWD 611
Score = 146 bits (314), Expect(3) = 6e-045
Identities = 65/90 (72%), Positives = 72/90 (80%)
Frame = +2 / +2
Query: 257 QQ*LLVCNHDTTQFHHLQRWLPPEFM*HVH*FMGLHQQEGSTKEFVQHG*RIQFLWNIAK 436
Q+*LLV +HD+T +HHLQ WLP EFM* VH*FMGLHQQ+GSTKEFV+HG*R F WNIAK
Sbjct: 341 QR*LLVYSHDSTPYHHLQSWLPLEFM*RVH*FMGLHQQKGSTKEFVRHG*RTHFHWNIAK 520
Query: 437 NAAGLPYL*GSQISSYLLTHPLRLS*LVLG 526
NA G +L*GSQI L HPL S*LVLG
Sbjct: 521 NAVGHRFL*GSQILGCLQIHPLPSS*LVLG 610
Score = 42.3 bits (86), Expect(3) = 6e-045
Identities = 19/26 (73%), Positives = 20/26 (76%)
Frame = +2 / +2
Query: 125 NDLGSWPLLLERMSILNG*LLVRGVF 202
ND G W LLLERMS+LNG* L RG F
Sbjct: 209 ND*GFWLLLLERMSMLNG**LARGAF 286
Score = 32.2 bits (64), Expect(2) = 2e-058
Identities = 13/19 (68%), Positives = 14/19 (73%)
Frame = +2 / +2
Query: 20 VPCGLRFYDMLIYSIHRRR 76
VP L FYDML YSI +RR
Sbjct: 104 VPYELHFYDMLTYSIRQRR 160
Score = 31.3 bits (62), Expect(3) = 6e-045
Identities = 12/19 (63%), Positives = 14/19 (73%)
Frame = +3 / +3
Query: 21 YLADCASTIC*STQSTEEG 77
YL +C STIC* TQ +EG
Sbjct: 105 YLTNCTSTIC*LTQFAKEG 161
>gb|BU971653.1|BU971653 HB19E05r BC Hordeum vulgare subsp. vulgare cDNA clone HB19E05
5-PRIME, mRNA sequence
Length = 659
Score = 309 bits (669), Expect(2) = 3e-084
Identities = 122/142 (85%), Positives = 138/142 (97%)
Frame = +1 / +1
Query: 529 GLAPFRGFLQERLALKQSGAELGTSILFFGCRNRNMDYIYEDELQTFLEEGALSELIVAF 708
GLAPFRGFLQERLALK+SG ELG+S+LFFGCRNR+MDYIYEDELQ FL+EGALSELIVA+
Sbjct: 37 GLAPFRGFLQERLALKESGVELGSSVLFFGCRNRDMDYIYEDELQNFLQEGALSELIVAY 216
Query: 709 SREGPTKEYVQHKMVEKATDIWNIISNGGYLYVCGDAKGMARDVHKMLHTIVQEQGSLDN 888
SREGPTKEYVQHKM++KAT+IWN+IS GGY+YVCGDAKGMA+DVH++LHTIVQ+QGSLDN
Sbjct: 217 SREGPTKEYVQHKMIDKATEIWNVISQGGYIYVCGDAKGMAKDVHRVLHTIVQKQGSLDN 396
Query: 889 SKTESYVKSLQMEGRYLRDVW* 954
SKTE YVK+LQMEGRYLRDVW*
Sbjct: 397 SKTELYVKNLQMEGRYLRDVW* 462
Score = 258 bits (558), Expect(2) = 1e-068
Identities = 112/143 (78%), Positives = 119/143 (83%)
Frame = -1 / -1
Query: 956 CHHTSRRYLPSICRLFT*LSVLELSKDPCSWTIV*SILCTSLAIPLASPQTYK*PPFEMM 777
C+HTSRRYLPSICR FT SV ELSKDPC TIV* LCTS A+PLASPQTY *PP EM
Sbjct: 464 CYHTSRRYLPSICRFFTYSSVFELSKDPCF*TIV*RTLCTSFAMPLASPQTYM*PP*EMT 285
Query: 776 FQISVAFSTILCCTYSFVGPSRENATISSESAPSSRKVCNSSSYM*SILRFLHPKKRIEV 597
FQISVA S ILCCTYS VGPSRE ATISSESAPS RK CNSSSY+*S+ RFLHPKK E+
Sbjct: 284 FQISVALSIILCCTYSLVGPSREYATISSESAPS*RKFCNSSSYI*SMSRFLHPKKSTEL 105
Query: 596 PSSAPDCFSANLSCKKPLKGASP 528
P+S PD F A+LSCKKPLKGASP
Sbjct: 104 PNSTPDSFRASLSCKKPLKGASP 36
Score = 200 bits (432), Expect = 1e-050
Identities = 91/142 (64%), Positives = 109/142 (76%)
Frame = -3 / -3
Query: 963 GDVSPYITEVPSFHLQALYIALGFGVIQRSLLLDYCMKHFVYISSHSLGITANI*VTTI* 784
G + P+ITEVP+FHL LYI LGF VIQRSLLL+YC+K+ VYI H+LGIT NI VTT+
Sbjct: 471 GVLLPHITEVPAFHL*VLYIQLGFRVIQRSLLLNYCVKNPVYILRHALGITTNIYVTTLR 292
Query: 783 DDVPNICGLFHHLMLHIFFRWPFPRECNN*LRKRPLLKESLQLIFIYVVHITVPASKEKD 604
DDVPN+ GL +HLMLHIFF W F R +N*L + P LKE L LI +Y+VH+ VPASKE+
Sbjct: 291 DDVPNLGGLVNHLMLHIFFGWSFTRVRDN*LGECPFLKEIL*LILVYIVHVAVPASKEEH 112
Query: 603 *SAQFCSRLFQC*PFLQEASKR 538
*+AQF SR F * FLQ+A KR
Sbjct: 111 *TAQFNSRFF*S*SFLQKAPKR 46
Score = 196 bits (423), Expect = 2e-049
Identities = 86/139 (61%), Positives = 96/139 (69%)
Frame = -2 / -2
Query: 955 VTIHHGGTFLPSAGSLHSSRFWSYPKIPALGLLYEAFCVHL*PFPWHHRKHISNHHLR*C 776
VT HHGGT LPS GSLH++RF SYPKIPA LL E CVH P PWHH KHI NH R*
Sbjct: 463 VTTHHGGTCLPSVGSLHTARFSSYPKIPASELLCEEPCVHPSPCPWHHHKHICNHLER*R 284
Query: 775 SKYLWPFPPSYAAHILSLALPERMQQLAQKAPPPQGKFATHLHICSPYYGSCIQRKGLKC 596
SK WP SYAAHIL L L E +QLA++ P P+G F TH I SP GSCIQR+ L C
Sbjct: 283 SKSRWPCQSSYAAHILWLVLHESTRQLARRVPLPEGNFVTHPRIYSPCRGSCIQRRALNC 104
Query: 595 PVLLQIVSVLTFPARSL*K 539
P+ LQI+ L FPA+S *K
Sbjct: 103 PIQLQILLELVFPAKSP*K 47
Score = 183 bits (394), Expect = 2e-045
Identities = 81/140 (57%), Positives = 97/140 (69%)
Frame = +3 / +3
Query: 537 SF*RLLAGKVSTETIWSRTGHFNPFLWMQEP*YGLHI*R*VXXXXXXXXXXXXXCCILSG 716
+F* L AGK S++ IWS G F+ LWMQEP +GL+I *V C +LS
Sbjct: 45 TF*GLFAGKTSSKRIWS*IGQFSALLWMQEPRHGLYIRG*VTKFPSGRGTLRANCRVLS* 224
Query: 717 RANERICAA*DGGKGHRYLEHHLKWWLLICLR*CQGNG*RCTQNASYNSPRAGIFG*LQN 896
R N+RICAA*D +GHR LE HL WL ICL *CQG+G CTQ +S+NS AGIFG*L+N
Sbjct: 225 RTNQRICAA*DD*QGHRDLERHLSRWLHICLW*CQGHGEGCTQGSSHNSSEAGIFG*LEN 404
Query: 897 RELCKEPADGRKVPP*CMVT 956
R +CKEP DGR+VPP*C+VT
Sbjct: 405 RAVCKEPTDGRQVPP*CVVT 464
Score = 125 bits (267), Expect(3) = 2e-041
Identities = 55/84 (65%), Positives = 59/84 (70%)
Frame = +2 / +2
Query: 716 KGQRKNMCSIRWWKRPQIFGTSSQMVVTYMFAVMPREWLEMYTKCFIQ*SKSRDLWITPK 895
K Q KNMCSIR RP FGTSS VVTYMF VMPR W MYT F Q* +SRDLWIT K
Sbjct: 224 KDQPKNMCSIR*LTRPPRFGTSSLKVVTYMFVVMPRAWRRMYTGFFTQ*FRSRDLWITRK 403
Query: 896 PRAM*RACRWKEGTSVMYGDTSPQ 967
P M*R RWK GTSVM G+ +P+
Sbjct: 404 PSCM*RTYRWKAGTSVMCGNNTPR 475
Score = 60.2 bits (125), Expect(3) = 2e-041
Identities = 27/42 (64%), Positives = 29/42 (69%)
Frame = +2 / +2
Query: 539 LLEASCRKG*H*NNLEQNWALQSFSLDAGTVIWTTYMKMSCK 664
LL A CRK * * NLE NWA+Q SLDAGT WT Y +MS K
Sbjct: 47 LLGAFCRKD*L*KNLELNWAVQCSSLDAGTATWTIYTRMSYK 172
Score = 27.2 bits (53), Expect(2) = 3e-084
Identities = 9/15 (60%), Positives = 14/15 (93%)
Frame = +2 / +1
Query: 1085 VDQCNSLTSNYLLLY 1129
V++CNSLTSN +L++
Sbjct: 595 VNRCNSLTSNMVLIF 639
Score = 23.1 bits (44), Expect(3) = 2e-041
Identities = 10/16 (62%), Positives = 12/16 (75%)
Frame = +3 / +2
Query: 1083 ELISAIL*HLTIYYYM 1130
ELI IL*HLT + Y+
Sbjct: 593 ELIGVIL*HLTWF*YL 640
Score = 22.6 bits (43), Expect(2) = 1e-068
Identities = 9/11 (81%), Positives = 9/11 (81%)
Frame = -2 / -3
Query: 1114 VRCQRIALINS 1082
VRCQRI INS
Sbjct: 624 VRCQRITPINS 592
>gb|BM368693.2|BM368693 EBem08_SQ004_F13_R embryo, 40 DPA, no treatment, cv Optic, EBem08
Hordeum vulgare subsp. vulgare cDNA clone
EBem08_SQ004_F13 5', mRNA sequence
Length = 430
Score = 305 bits (661), Expect = 3e-082
Identities = 119/143 (83%), Positives = 131/143 (91%)
Frame = +1 / +1
Query: 436 ECSWAPIFVRQSNFKLPADPSTPIIMIGPGTGLAPFRGFLQERLALKQSGAELGTSILFF 615
ECSWAPIFVRQSNFKLPADP+ PIIM+GPGTGLAPFRGFLQERLALK++G ELG +ILFF
Sbjct: 1 ECSWAPIFVRQSNFKLPADPTVPIIMVGPGTGLAPFRGFLQERLALKETGVELGRAILFF 180
Query: 616 GCRNRNMDYIYEDELQTFLEEGALSELIVAFSREGPTKEYVQHKMVEKATDIWNIISNGG 795
GCRNR MD+IYEDEL F E GALSEL+VAFSREGPTKEYVQHKM EKA D+W+I+S GG
Sbjct: 181 GCRNRQMDFIYEDELNNFTESGALSELVVAFSREGPTKEYVQHKMAEKAADLWSIVSQGG 360
Query: 796 YLYVCGDAKGMARDVHKMLHTIV 864
Y+YVCGDAKGMARDVH+ LHTIV
Sbjct: 361 YVYVCGDAKGMARDVHRALHTIV 429
Score = 231 bits (499), Expect = 7e-060
Identities = 101/142 (71%), Positives = 111/142 (78%)
Frame = -1 / -3
Query: 863 TIV*SILCTSLAIPLASPQTYK*PPFEMMFQISVAFSTILCCTYSFVGPSRENATISSES 684
T+V S CTSLA+PLASPQTY *PP+E M S AFS ILC TYSFVGPSRE AT +S+
Sbjct: 428 TMVCSARCTSLAMPLASPQTYT*PPWETMLHRSAAFSAILCWTYSFVGPSREKATTNSDR 249
Query: 683 APSSRKVCNSSSYM*SILRFLHPKKRIEVPSSAPDCFSANLSCKKPLKGASPVPGPIMII 504
AP S K+ +SSSYM SI RFLHPK R+ PSS P F ANLSCKKPLKGA PVPGP +II
Sbjct: 248 APDSVKLFSSSSYMKSIWRFLHPKNRMARPSSTPVSFKANLSCKKPLKGARPVPGPTIII 69
Query: 503 GVDGSAGNLKFDCLTNMGAQLH 438
G GSAGNLKFDCLT +GAQLH
Sbjct: 68 GTVGSAGNLKFDCLTKIGAQLH 3
Score = 112 bits (240), Expect = 3e-024
Identities = 57/143 (39%), Positives = 85/143 (59%)
Frame = -3 / -2
Query: 864 DYCMKHFVYISSHSLGITANI*VTTI*DDVPNICGLFHHLMLHIFFRWPFPRECNN*LRK 685
+Y ++ V++S H+LGI A+I + T+ + P IC L H +L + F R+ N+ L +
Sbjct: 429 NYGVQRAVHVSRHALGIAADIHIATLGNYAP*ICSLLCHFVLDVLFCRTLTRKGNDQLGQ 250
Query: 684 RPLLKESLQLIFIYVVHITVPASKEKD*SAQFCSRLFQC*PFLQEASKRSQPCPRTNHDN 505
+ +QL+ +Y VH+ V A +E+D +AQF + LF * FL EA +R + PR H N
Sbjct: 249 GSRFGKVVQLVLVYEVHLAVSAPEEQDGTAQFHTSLF*S*SFL*EAPERCKASPRAYHYN 70
Query: 504 RSGWVSR*LEI*LPHKYGSPAAF 436
R +S E+*LPHK SPAAF
Sbjct: 69 RHCRISGQFEV*LPHKNWSPAAF 1
>gb|BU985246.1|BU985246 HF06J02r HF Hordeum vulgare subsp. vulgare cDNA clone HF06J02
5-PRIME, mRNA sequence
Length = 623
Score = 297 bits (644), Expect = 7e-080
Identities = 120/139 (86%), Positives = 130/139 (93%)
Frame = +1 / +3
Query: 118 EAERLRFLASPAGKDEYSQWITASQRSLLEVMAAFPSAKPPLGVFFAAIAPRLQPRYYSI 297
EAERLR LASPAGK EYSQWI ASQRSLLEV++ FPSAKPPLGVFFAAIAPRLQPRYYSI
Sbjct: 207 EAERLRHLASPAGKKEYSQWIIASQRSLLEVISEFPSAKPPLGVFFAAIAPRLQPRYYSI 386
Query: 298 SSSPKMAPSRIHVTCALVYGPSPTGRIHQGVCSTWMKNTIPLEYSEECSWAPIFVRQSNF 477
SSSP+MAP+RIHVTC+LV+G SPTGRIH+GVCSTWMKN+ P E SEECSWAPIFVRQSNF
Sbjct: 387 SSSPRMAPTRIHVTCSLVHGQSPTGRIHKGVCSTWMKNSTPSEESEECSWAPIFVRQSNF 566
Query: 478 KLPADPSTPIIMIGPGTGL 534
KLPADP+ PIIM+GPGTGL
Sbjct: 567 KLPADPTVPIIMVGPGTGL 623
Score = 237 bits (512), Expect = 1e-061
Identities = 108/170 (63%), Positives = 122/170 (71%)
Frame = -1 / -2
Query: 530 PVPGPIMIIGVDGSAGNLKFDCLTNMGAQLHSSLYSRGIVFFIHVEQTPWWILPVGEGP* 351
PVPGP +IIG GSAGNLKFDCLT +GAQLHSSL S G+ FFI VEQTP WILPVG P*
Sbjct: 619 PVPGPTIIIGTVGSAGNLKFDCLTKIGAQLHSSLSSDGVEFFIQVEQTPLWILPVGLCP* 440
Query: 350 TNAHVT*ILEGAIFGDDEIE*YRGCRRGAIAAKNTPSGGLAEGNAAITSRRLL*LAVIH* 171
T+ HVT*IL GAI G+++IE*Y G RRGAIAAK TPSGG A+GN+ ITS+RLL*LA+IH*
Sbjct: 439 TSEHVT*ILVGAILGEEDIE*YLG*RRGAIAAKKTPSGGFADGNSEITSKRLL*LAIIH* 260
Query: 170 EYSSFPAGEAKNLXXXXXXXXXXXXXXXXXXAFFGGLSRSAYRRSAVRKV 21
EYS FPAG+A+ L F G +RSAY SA V
Sbjct: 259 EYSFFPAGDARCLSRSASLGSDA*AAKASKTLFLGEFNRSAYLASATLTV 110
Score = 127 bits (272), Expect(2) = 4e-034
Identities = 65/126 (51%), Positives = 81/126 (64%)
Frame = -3 / -1
Query: 525 PRTNHDNRSGWVSR*LEI*LPHKYGSPAAFFAIFQRNCILHPC*TNSLVDPSCW*RPIN* 346
PR H NR +S E+*LPHK SPAAFFA+F+ + ILHP TNS +DPS P+N*
Sbjct: 614 PRAYHYNRHCRISGQFEV*LPHKNWSPAAFFALFRWS*ILHPSGTNSFMDPSSGALPMN* 435
Query: 345 CTCYMNSGGSHLWR**N*VVSWLQTRSYCCEKHSQWWLS*RECSHNFKKTPLTSSYPLRI 166
TCYMNS H W *VVS L+ RS C++ ++ * + +NF++T LTS YPLRI
Sbjct: 434 *TCYMNSCWCHSW*GRY*VVSRLKARSNSCKEDTKRRFR*WKLRNNFQETSLTSDYPLRI 255
Query: 165 LILSSR 148
LSSR
Sbjct: 254 FFLSSR 237
Score = 120 bits (257), Expect = 2e-026
Identities = 56/128 (43%), Positives = 76/128 (59%)
Frame = +3 / +2
Query: 144 LSCWKG*VFSMDNCXXXXXXXXYGCIPFS*ATTGSVFRSNSSSSATTILLNFIISKDGSL 323
+ CWK +FS+DN Y + S + + S SS + ILLN ++K+G+
Sbjct: 233 IPCWKERIFSVDNR*SKKSLGSYFGVSISETSAWCLLCSYCSSPSAEILLNIFLTKNGTN 412
Query: 324 QNSCNMCISLWAFTNRKDPPRSLFNMDEEYNSSGI*RRMQLGSHICEAVKFQVTC*PIHS 503
+NSCNM S WA + KDP RSLF++DEE+NS G RRMQLGS+ CEAVK Q+ * +
Sbjct: 413 KNSCNMFTSSWAKPHWKDP*RSLFHLDEEFNSIGRERRMQLGSNFCEAVKLQIAR*SYSA 592
Query: 504 DYHDWSWD 527
Y+ WD
Sbjct: 593 YYNGRPWD 616
Score = 95.0 bits (201), Expect(2) = 2e-023
Identities = 57/114 (50%), Positives = 66/114 (57%)
Frame = -2 / -3
Query: 490 QQVT*NLTASQIWEPSCILRYIPEELYSSSMLNKLLGGSFLLVKAHKLMHMLHEFWREPS 311
Q+ *+LTASQ EPSCILR +P EL SSS NKLL GSF AH+L++MLHEF P
Sbjct: 579 QRAI*SLTASQKLEPSCILRSLPMELNSSSKWNKLLYGSFQWGFAHELVNMLHEFLLVPF 400
Query: 310 LEMMKLSSIVVADEELLLRKTLPVVA*LKGMQP*LQEDSSD*QLSIENTHPFQQ 149
L LSSI EE L++ L *L D D*+LS EN FQQ
Sbjct: 399 LVRKILSSISAEGEEQ*LQRRHQAEVSLMETPK*LPRDFFD*RLSTENILSFQQ 238
Score = 38.2 bits (77), Expect(2) = 4e-034
Identities = 16/31 (51%), Positives = 21/31 (67%)
Frame = -2 / -3
Query: 112 DQMHEKLKQAKQPSSVD*VDQHIVEAQSARY 20
DQMHE+ KQ K S V+ D+HI + Q +RY
Sbjct: 201 DQMHEQPKQVKHSS*VNSTDRHIWQVQPSRY 109
Score = 34.5 bits (69), Expect(2) = 2e-023
Identities = 18/31 (58%), Positives = 22/31 (70%)
Frame = -3 / -1
Query: 111 IRCMRS*SKQSSLLRWIE*ISIS*KRSPQGT 19
IRCM S SK ++LLR I+ I IS K +P GT
Sbjct: 200 IRCMSSQSK*NTLLR*IQQIGISGKCNPHGT 108
>gb|BJ468329.1|BJ468329 BJ468329 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags38e09 3', mRNA sequence
Length = 714
Score = 204 bits (441), Expect(2) = 4e-073
Identities = 81/99 (81%), Positives = 90/99 (90%)
Frame = +1 / -1
Query: 664 TFLEEGALSELIVAFSREGPTKEYVQHKMVEKATDIWNIISNGGYLYVCGDAKGMARDVH 843
TF E GALSEL+VAFSREGPTKEYVQHKM EKA D+W+I+S GGY+YVCGDAKGMARDVH
Sbjct: 579 TFTESGALSELVVAFSREGPTKEYVQHKMAEKAADLWSIVSQGGYVYVCGDAKGMARDVH 400
Query: 844 KMLHTIVQEQGSLDNSKTESYVKSLQMEGRYLRDVW*HI 960
+ LHTIVQEQGSLD+SKTE YVK+LQ EGRYLRDVW* +
Sbjct: 399 RALHTIVQEQGSLDSSKTEGYVKNLQTEGRYLRDVW*QL 283
Score = 150 bits (323), Expect(2) = 6e-051
Identities = 68/102 (66%), Positives = 77/102 (75%)
Frame = -1 / +2
Query: 968 FEVMCHHTSRRYLPSICRLFT*LSVLELSKDPCSWTIV*SILCTSLAIPLASPQTYK*PP 789
F C+ TS RYLPS+ R FT* SVLELS++PCS T+V S CTSLA+PLASPQTY *PP
Sbjct: 275 FRRNCYQTSLRYLPSV*RFFT*PSVLELSREPCS*TMVCSARCTSLAMPLASPQTYT*PP 454
Query: 788 FEMMFQISVAFSTILCCTYSFVGPSRENATISSESAPSSRKV 663
+E M S AFS ILC TYSFVGPSRE AT +S+ AP S KV
Sbjct: 455 WETMLHRSAAFSAILCWTYSFVGPSREKATTNSDRAPDSVKV 580
Score = 91.3 bits (193), Expect(2) = 4e-073
Identities = 36/46 (78%), Positives = 40/46 (86%)
Frame = +1 / -3
Query: 532 LAPFRGFLQERLALKQSGAELGTSILFFGCRNRNMDYIYEDELQTF 669
LAP RGFLQERLALK++G ELG +ILFFGCRNR MD+IYEDEL F
Sbjct: 712 LAPXRGFLQERLALKETGVELGRAILFFGCRNRQMDFIYEDELNNF 575
Score = 71.2 bits (149), Expect(2) = 6e-051
Identities = 31/45 (68%), Positives = 34/45 (75%)
Frame = -1 / +3
Query: 668 KVCNSSSYM*SILRFLHPKKRIEVPSSAPDCFSANLSCKKPLKGA 534
K+ +SSSYM SI RFLHPK R+ PSS P F ANLSCKKPL GA
Sbjct: 576 KLFSSSSYMKSIWRFLHPKNRMARPSSTPVSFKANLSCKKPLXGA 710
>gb|CB876070.1|CB876070 HX10D01w HX Hordeum vulgare subsp. vulgare cDNA clone HX10D01
3-PRIME, mRNA sequence
Length = 681
Score = 237 bits (512), Expect(3) = 3e-064
Identities = 93/109 (85%), Positives = 106/109 (97%)
Frame = +1 / -1
Query: 628 RNMDYIYEDELQTFLEEGALSELIVAFSREGPTKEYVQHKMVEKATDIWNIISNGGYLYV 807
R+MDYIYEDELQ FL+EGALSELIVA+SREGPTKEYVQHKM++KAT+IWN+IS GGY+YV
Sbjct: 681 RDMDYIYEDELQNFLQEGALSELIVAYSREGPTKEYVQHKMIDKATEIWNVISQGGYIYV 502
Query: 808 CGDAKGMARDVHKMLHTIVQEQGSLDNSKTESYVKSLQMEGRYLRDVW* 954
CGDAKGMA+DVH++LHTIVQ+QGSLDNSKTE YVK+LQMEGRYLRDVW*
Sbjct: 501 CGDAKGMAKDVHRVLHTIVQKQGSLDNSKTELYVKNLQMEGRYLRDVW* 355
Score = 194 bits (418), Expect(2) = 2e-049
Identities = 86/108 (79%), Positives = 90/108 (83%)
Frame = -1 / +2
Query: 956 CHHTSRRYLPSICRLFT*LSVLELSKDPCSWTIV*SILCTSLAIPLASPQTYK*PPFEMM 777
C+HTSRRYLPSICR FT SV ELSKDPC TIV* LCTS A+PLASPQTY *PP EM
Sbjct: 353 CYHTSRRYLPSICRFFTYSSVFELSKDPCF*TIV*RTLCTSFAMPLASPQTYM*PP*EMT 532
Query: 776 FQISVAFSTILCCTYSFVGPSRENATISSESAPSSRKVCNSSSYM*SI 633
FQISVA S ILCCTYS VGPSRE ATISSESAPS RK CNSSSY+*S+
Sbjct: 533 FQISVALSIILCCTYSLVGPSREYATISSESAPS*RKFCNSSSYI*SM 676
Score = 163 bits (350), Expect = 2e-039
Identities = 71/111 (63%), Positives = 86/111 (77%)
Frame = -3 / +1
Query: 963 GDVSPYITEVPSFHLQALYIALGFGVIQRSLLLDYCMKHFVYISSHSLGITANI*VTTI* 784
G + P+ITEVP+FHL LYI LGF VIQRSLLL+YC+K+ VYI H+LGIT NI VTT+
Sbjct: 346 GVLLPHITEVPAFHL*VLYIQLGFRVIQRSLLLNYCVKNPVYILRHALGITTNIYVTTLR 525
Query: 783 DDVPNICGLFHHLMLHIFFRWPFPRECNN*LRKRPLLKESLQLIFIYVVHI 631
DDVPN+ GL +HLMLHIFF W F R +N*L + P LKE L LI +Y+VH+
Sbjct: 526 DDVPNLGGLVNHLMLHIFFGWSFTRVRDN*LGECPFLKEIL*LILVYIVHV 678
Score = 154 bits (331), Expect = 1e-036
Identities = 67/107 (62%), Positives = 73/107 (68%)
Frame = -2 / +3
Query: 955 VTIHHGGTFLPSAGSLHSSRFWSYPKIPALGLLYEAFCVHL*PFPWHHRKHISNHHLR*C 776
VT HHGGT LPS GSLH++RF SYPKIPA LL E CVH P PWHH KHI NH R*
Sbjct: 354 VTTHHGGTCLPSVGSLHTARFSSYPKIPASELLCEEPCVHPSPCPWHHHKHICNHLER*R 533
Query: 775 SKYLWPFPPSYAAHILSLALPERMQQLAQKAPPPQGKFATHLHICSP 635
SK WP SYAAHIL L L E +QLA++ P P+G F TH I SP
Sbjct: 534 SKSRWPCQSSYAAHILWLVLHESTRQLARRVPLPEGNFVTHPRIYSP 674
Score = 142 bits (305), Expect(2) = 1e-033
Identities = 63/108 (58%), Positives = 75/108 (69%)
Frame = +3 / -3
Query: 633 YGLHI*R*VXXXXXXXXXXXXXCCILSGRANERICAA*DGGKGHRYLEHHLKWWLLICLR 812
+GL+I *V C +LS R N+RICAA*D +GHR LE HL WL ICL
Sbjct: 676 HGLYIRG*VTKFPSGRGTLRANCRVLS*RTNQRICAA*DD*QGHRDLERHLSRWLHICLW 497
Query: 813 *CQGNG*RCTQNASYNSPRAGIFG*LQNRELCKEPADGRKVPP*CMVT 956
*CQG+G CTQ +S+NS AGIFG*L+NR +CKEP DGR+VPP*C+VT
Sbjct: 496 *CQGHGEGCTQGSSHNSSEAGIFG*LENRAVCKEPTDGRQVPP*CVVT 353
Score = 125 bits (267), Expect = 7e-028
Identities = 55/84 (65%), Positives = 59/84 (70%)
Frame = +2 / -2
Query: 716 KGQRKNMCSIRWWKRPQIFGTSSQMVVTYMFAVMPREWLEMYTKCFIQ*SKSRDLWITPK 895
K Q KNMCSIR RP FGTSS VVTYMF VMPR W MYT F Q* +SRDLWIT K
Sbjct: 593 KDQPKNMCSIR*LTRPPRFGTSSLKVVTYMFVVMPRAWRRMYTGFFTQ*FRSRDLWITRK 414
Query: 896 PRAM*RACRWKEGTSVMYGDTSPQ 967
P M*R RWK GTSVM G+ +P+
Sbjct: 413 PSCM*RTYRWKAGTSVMCGNNTPR 342
Score = 27.2 bits (53), Expect(3) = 3e-064
Identities = 9/15 (60%), Positives = 14/15 (93%)
Frame = +2 / -1
Query: 1085 VDQCNSLTSNYLLLY 1129
V++CNSLTSN +L++
Sbjct: 222 VNRCNSLTSNMVLIF 178
Score = 25.8 bits (50), Expect(3) = 3e-064
Identities = 7/20 (35%), Positives = 13/20 (65%)
Frame = +3 / -1
Query: 1116 IYYYMRWEELMENKCCCRFV 1175
+ ++ W + +NKCCCR +
Sbjct: 189 VLIFIVWMDG*KNKCCCRLL 130
Score = 24.4 bits (47), Expect(2) = 1e-033
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = +3 / -2
Query: 1083 ELISAIL*HLTIYYYMRWEELME 1151
ELI IL*HLT + Y+ + ++E
Sbjct: 224 ELIGVIL*HLTWF*YLLYGWMVE 156
Score = 22.6 bits (43), Expect(2) = 2e-049
Identities = 9/11 (81%), Positives = 9/11 (81%)
Frame = -2 / +1
Query: 1114 VRCQRIALINS 1082
VRCQRI INS
Sbjct: 193 VRCQRITPINS 225
>gb|CA025459.1|CA025459 HZ52D16r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ52D16
5-PRIME, mRNA sequence
Length = 444
Score = 234 bits (505), Expect = 1e-060
Identities = 98/128 (76%), Positives = 103/128 (80%)
Frame = +1 / +1
Query: 22 TLRTALLRYXXXXXXXXXXXXXXXXXXXXXXXEAERLRFLASPAGKDEYSQWITASQRSL 201
TLRTALLRY EAERLRFLASPAGKDEY+QWI ASQRSL
Sbjct: 61 TLRTALLRYADLLNSPKKAALTALAAHASDPAEAERLRFLASPAGKDEYAQWIVASQRSL 240
Query: 202 LEVMAAFPSAKPPLGVFFAAIAPRLQPRYYSISSSPKMAPSRIHVTCALVYGPSPTGRIH 381
LEVMAAFPSAKPPLGVFFAA+APRLQPR+YSISSSPK+APSRIHVTCALVYGP+PT RIH
Sbjct: 241 LEVMAAFPSAKPPLGVFFAAVAPRLQPRFYSISSSPKLAPSRIHVTCALVYGPTPTERIH 420
Query: 382 QGVCSTWM 405
QGVCSTWM
Sbjct: 421 QGVCSTWM 444
Score = 215 bits (464), Expect = 4e-055
Identities = 97/128 (75%), Positives = 100/128 (78%)
Frame = -1 / -2
Query: 404 IHVEQTPWWILPVGEGP*TNAHVT*ILEGAIFGDDEIE*YRGCRRGAIAAKNTPSGGLAE 225
IHVEQTPWWIL VG GP*TNAHVT*ILEGA FGDD++E* RGCRRGA AAKNTP GGLAE
Sbjct: 443 IHVEQTPWWILSVGVGP*TNAHVT*ILEGANFGDDDME*NRGCRRGATAAKNTPKGGLAE 264
Query: 224 GNAAITSRRLL*LAVIH*EYSSFPAGEAKNLXXXXXXXXXXXXXXXXXXAFFGGLSRSAY 45
GNAAITSRRLL LA IH* YSSFPAGEAKNL AFFG LS+SAY
Sbjct: 263 GNAAITSRRLLWLATIH*AYSSFPAGEAKNLSRSASAGSEA*AAKAVKAAFFGELSKSAY 84
Query: 44 RRSAVRKV 21
RRSAVRKV
Sbjct: 83 RRSAVRKV 60
Score = 204 bits (441), Expect = 7e-052
Identities = 94/129 (72%), Positives = 101/129 (78%)
Frame = -3 / -1
Query: 405 HPC*TNSLVDPSCW*RPIN*CTCYMNSGGSHLWR**N*VVSWLQTRSYCCEKHSQWWLS* 226
HPC TNSLVDP CW RPIN*CT YMNS GS LWR** V SWL TRSY C+++ Q S*
Sbjct: 444 HPCRTNSLVDPFCWCRPIN*CTRYMNSRGSQLWR**YGVESWL*TRSYRCKEYPQGRFS* 265
Query: 225 RECSHNFKKTPLTSSYPLRILILSSRRGQEPKSFSFSWIRCMRS*SKQSSLLRWIE*ISI 46
RECSHNFKK PL S YPL ILILSSRR Q+P+SFSFSW+R M S*S QSSLL IE*+SI
Sbjct: 264 RECSHNFKKAPLASYYPLSILILSSRRSQKPQSFSFSWVRSMSS*SSQSSLLWRIE*VSI 85
Query: 45 S*KRSPQGT 19
S*K S GT
Sbjct: 84 S*KCSS*GT 58
Score = 196 bits (423), Expect = 2e-049
Identities = 92/128 (71%), Positives = 101/128 (78%)
Frame = -2 / -3
Query: 403 SMLNKLLGGSFLLVKAHKLMHMLHEFWREPSLEMMKLSSIVVADEELLLRKTLPVVA*LK 224
SM NKLLGGSFLLV AHKLMH LHEF REP+LEMM S IV DEEL L++ P *LK
Sbjct: 442 SMSNKLLGGSFLLV*AHKLMHTLHEF*REPTLEMMIWSRIVAVDEELPLQRIPPRAV*LK 263
Query: 223 GMQP*LQEDSSD*QLSIENTHPFQQERPRT*VVQLQLDQMHEKLKQAKQPSSVD*VDQHI 44
GMQP*LQE SS * LSIE+THPFQQE+P+T VVQLQL Q HE+LKQ+KQPS +*V QHI
Sbjct: 262 GMQP*LQEGSSG*LLSIEHTHPFQQEKPKTSVVQLQLGQKHEQLKQSKQPSLAN*VSQHI 83
Query: 43 VEAQSARY 20
VE Q RY
Sbjct: 82 VEVQFVRY 59
Score = 142 bits (304), Expect(2) = 1e-036
Identities = 63/94 (67%), Positives = 69/94 (73%)
Frame = +3 / +3
Query: 123 *TT*VLGLSCWKG*VFSMDNCXXXXXXXXYGCIPFS*ATTGSVFRSNSSSSATTILLNFI 302
*TT V G SCWKG*V SMD+ YGCIPFS* G + S SSSS TILL+ I
Sbjct: 162 *TTEVFGFSCWKG*VCSMDSS*PEEPS*SYGCIPFS*TALGGILCSGSSSSTATILLHII 341
Query: 303 ISKDGSLQNSCNMCISLWAFTNRKDPPRSLFNMD 404
ISK GSL NSCN+CISLWA+TNRKDPPRSLF+MD
Sbjct: 342 ISKVGSL*NSCNVCISLWAYTNRKDPPRSLFDMD 443
Score = 95.9 bits (203), Expect(3) = 6e-030
Identities = 38/49 (77%), Positives = 44/49 (89%)
Frame = +2 / +2
Query: 257 QQ*LLVCNHDTTQFHHLQRWLPPEFM*HVH*FMGLHQQEGSTKEFVQHG 403
Q+*LLV +HD+T +HHLQ WLP EFM* VH*FMGLHQQ+GSTKEFV+HG
Sbjct: 296 QR*LLVYSHDSTPYHHLQSWLPLEFM*RVH*FMGLHQQKGSTKEFVRHG 442
Score = 42.3 bits (86), Expect(3) = 6e-030
Identities = 19/26 (73%), Positives = 20/26 (76%)
Frame = +2 / +2
Query: 125 NDLGSWPLLLERMSILNG*LLVRGVF 202
ND G W LLLERMS+LNG* L RG F
Sbjct: 164 ND*GFWLLLLERMSMLNG**LARGAF 241
Score = 32.2 bits (64), Expect(2) = 1e-036
Identities = 13/19 (68%), Positives = 14/19 (73%)
Frame = +2 / +2
Query: 20 VPCGLRFYDMLIYSIHRRR 76
VP L FYDML YSI +RR
Sbjct: 59 VPYELHFYDMLTYSIRQRR 115
Score = 31.3 bits (62), Expect(3) = 6e-030
Identities = 12/19 (63%), Positives = 14/19 (73%)
Frame = +3 / +3
Query: 21 YLADCASTIC*STQSTEEG 77
YL +C STIC* TQ +EG
Sbjct: 60 YLTNCTSTIC*LTQFAKEG 116
>gb|CA032561.1|CA032561 HX13H09r HX Hordeum vulgare subsp. vulgare cDNA clone HX13H09
5-PRIME, mRNA sequence
Length = 311
Score = 232 bits (500), Expect = 5e-060
Identities = 90/103 (87%), Positives = 97/103 (94%)
Frame = +1 / +1
Query: 334 VTCALVYGPSPTGRIHQGVCSTWMKNTIPLEYSEECSWAPIFVRQSNFKLPADPSTPIIM 513
VTCALVYGP+PT RIHQGVCSTWMKNT+PLEYSE CSWAPIFVRQ+NF LPADPSTPIIM
Sbjct: 1 VTCALVYGPTPTERIHQGVCSTWMKNTLPLEYSE*CSWAPIFVRQTNFTLPADPSTPIIM 180
Query: 514 IGPGTGLAPFRGFLQERLALKQSGAELGTSILFFGCRNRNMDY 642
IGPGTGLAPFRGFLQERL LK+SG ELG+S+LFFGC NR+MDY
Sbjct: 181 IGPGTGLAPFRGFLQERLTLKESGVELGSSVLFFGCTNRDMDY 309
Score = 197 bits (424), Expect = 1e-049
Identities = 79/103 (76%), Positives = 89/103 (86%)
Frame = -1 / -1
Query: 644 M*SILRFLHPKKRIEVPSSAPDCFSANLSCKKPLKGASPVPGPIMIIGVDGSAGNLKFDC 465
+*S+ RF+HPKK E+P+S PD F +LSCKKPLKGASPVPGPIM++GVDGSAGN+KF C
Sbjct: 311 I*SMSRFVHPKKSTELPNSTPDSFRVSLSCKKPLKGASPVPGPIMMMGVDGSAGNVKFVC 132
Query: 464 LTNMGAQLHSSLYSRGIVFFIHVEQTPWWILPVGEGP*TNAHV 336
LT +GAQLH SLYS G VFFIHVEQTPWWIL VG GP*TNAHV
Sbjct: 131 LTKIGAQLHYSLYSSGSVFFIHVEQTPWWILSVGVGP*TNAHV 3
Score = 166 bits (356), Expect = 3e-040
Identities = 65/103 (63%), Positives = 79/103 (76%)
Frame = +3 / +3
Query: 336 NMCISLWAFTNRKDPPRSLFNMDEEYNSSGI*RRMQLGSHICEAVKFQVTC*PIHSDYHD 515
N+CISLWA+TNRKDPPRSLF+MDEE+ S+GI*R MQLG+ CEA KF V C IHS +HD
Sbjct: 3 NVCISLWAYTNRKDPPRSLFDMDEEHTSTGI*RIMQLGTDFCEADKFYVACRSIHSHHHD 182
Query: 516 WSWDRAGSF*RLLAGKVSTETIWSRTGHFNPFLWMQEP*YGLH 644
WSWD +F* L AGK +++ IWS G F+ LWM EP +GL+
Sbjct: 183 WSWDWTSTF*GLFAGKTNSKRIWS*IGQFSALLWMHEPRHGLY 311
Score = 150 bits (322), Expect = 2e-035
Identities = 65/103 (63%), Positives = 74/103 (71%)
Frame = -3 / -3
Query: 642 VVHITVPASKEKD*SAQFCSRLFQC*PFLQEASKRSQPCPRTNHDNRSGWVSR*LEI*LP 463
+VH+ V ASKE+ *+AQF SR F * FLQ+A KR PRTNHD+ SGW+ R +I LP
Sbjct: 309 IVHVAVRASKEEH*TAQFNSRFF*S*SFLQKAPKRC*SSPRTNHDDGSGWICRQRKICLP 130
Query: 462 HKYGSPAAFFAIFQRNCILHPC*TNSLVDPSCW*RPIN*CTCY 334
HK P A FAIFQ C+LHPC TNSLVDP CW RPIN*CT Y
Sbjct: 129 HKNRCPTALFAIFQWKCVLHPCRTNSLVDPFCWCRPIN*CTRY 1
Score = 146 bits (313), Expect = 3e-034
Identities = 69/102 (67%), Positives = 77/102 (75%)
Frame = -2 / -2
Query: 640 SPYYGSCIQRKGLKCPVLLQIVSVLTFPARSL*KEPALSQDQS**SEWMGQQVT*NLTAS 461
SP GSCIQR+ L CP+ LQI+ L FPA+S *K SQDQS** EWM Q T*NL+AS
Sbjct: 307 SPCRGSCIQRRALNCPIQLQILLELVFPAKSP*KVLVQSQDQS**WEWMDLQAT*NLSAS 128
Query: 460 QIWEPSCILRYIPEELYSSSMLNKLLGGSFLLVKAHKLMHML 335
Q P+CI+RYIP E+ SSSM NKLLGGSFLLV AHKLMH L
Sbjct: 127 QKSVPNCIIRYIPVEVCSSSMSNKLLGGSFLLV*AHKLMHTL 2
Score = 136 bits (292), Expect = 2e-031
Identities = 67/102 (65%), Positives = 71/102 (69%)
Frame = +2 / +2
Query: 335 *HVH*FMGLHQQEGSTKEFVQHG*RIQFLWNIAKNAAGLPYL*GSQISSYLLTHPLRLS* 514
* VH*FMGLHQQ+GSTKEFV+HG*R F WNIA NA G +L*G QI L HPL S*
Sbjct: 2 *RVH*FMGLHQQKGSTKEFVRHG*RTHFHWNIANNAVGHRFL*GRQILRCLQIHPLPSS* 181
Query: 515 LVLGQGWLLLEASCRKG*H*NNLEQNWALQSFSLDAGTVIWT 640
LVLG LL A CRK * * NLE NWA+Q SLDA T WT
Sbjct: 182 LVLGLD*HLLGAFCRKD*L*KNLELNWAVQCSSLDARTATWT 307
>gb|BU972360.1|BU972360 HB21G23r BC Hordeum vulgare subsp. vulgare cDNA clone HB21G23
5-PRIME, mRNA sequence
Length = 563
Score = 227 bits (491), Expect = 8e-059
Identities = 93/109 (85%), Positives = 101/109 (92%)
Frame = +1 / +1
Query: 118 EAERLRFLASPAGKDEYSQWITASQRSLLEVMAAFPSAKPPLGVFFAAIAPRLQPRYYSI 297
EAERLR LASPAGK EYSQWI ASQRSLLEV++ FPSAKPPLGVFFAAIAPRLQPRYYSI
Sbjct: 235 EAERLRHLASPAGKKEYSQWIIASQRSLLEVISEFPSAKPPLGVFFAAIAPRLQPRYYSI 414
Query: 298 SSSPKMAPSRIHVTCALVYGPSPTGRIHQGVCSTWMKNTIPLEYSEECS 444
SSSP+MAP+RIHVTC+LV+G SPTGRIH+GVCSTWMKN+ P E SEECS
Sbjct: 415 SSSPRMAPTRIHVTCSLVHGQSPTGRIHKGVCSTWMKNSTPSEESEECS 561
Score = 183 bits (394), Expect = 2e-045
Identities = 86/142 (60%), Positives = 98/142 (69%)
Frame = -1 / -1
Query: 446 QLHSSLYSRGIVFFIHVEQTPWWILPVGEGP*TNAHVT*ILEGAIFGDDEIE*YRGCRRG 267
QLHSSL S G+ FFI VEQTP WILPVG P*T+ HVT*IL GAI G+++IE*Y G RRG
Sbjct: 563 QLHSSLSSDGVEFFIQVEQTPLWILPVGLCP*TSEHVT*ILVGAILGEEDIE*YLG*RRG 384
Query: 266 AIAAKNTPSGGLAEGNAAITSRRLL*LAVIH*EYSSFPAGEAKNLXXXXXXXXXXXXXXX 87
AIAAK TPSGG A+GN+ ITS+RLL*LA+IH*EYS FPAG+A+ L
Sbjct: 383 AIAAKKTPSGGFADGNSEITSKRLL*LAIIH*EYSFFPAGDARCLSRSASLGSDA*AAKA 204
Query: 86 XXXAFFGGLSRSAYRRSAVRKV 21
F G +RSAY SA V
Sbjct: 203 SKTLFLGEFNRSAYLASATLTV 138
Score = 100 bits (212), Expect(2) = 6e-026
Identities = 51/99 (51%), Positives = 65/99 (65%)
Frame = -3 / -3
Query: 444 AAFFAIFQRNCILHPC*TNSLVDPSCW*RPIN*CTCYMNSGGSHLWR**N*VVSWLQTRS 265
AAFFA+F+ + ILHP TNS +DPS P+N* TCYMNS H W *VVS L+ RS
Sbjct: 561 AAFFALFRWS*ILHPSGTNSFMDPSSGALPMN**TCYMNSCWCHSW*GRY*VVSRLKARS 382
Query: 264 YCCEKHSQWWLS*RECSHNFKKTPLTSSYPLRILILSSR 148
C++ ++ * + +NF++T LTS YPLRI LSSR
Sbjct: 381 NSCKEDTKRRFR*WKLRNNFQETSLTSDYPLRIFFLSSR 265
Score = 38.2 bits (77), Expect(2) = 6e-026
Identities = 16/31 (51%), Positives = 21/31 (67%)
Frame = -2 / -2
Query: 112 DQMHEKLKQAKQPSSVD*VDQHIVEAQSARY 20
DQMHE+ KQ K S V+ D+HI + Q +RY
Sbjct: 229 DQMHEQPKQVKHSS*VNSTDRHIWQVQPSRY 137
>gb|CA021204.1|CA021204 HZ39G19r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ39G19
5-PRIME, mRNA sequence
Length = 387
Score = 209 bits (450), Expect(2) = 4e-055
Identities = 83/94 (88%), Positives = 89/94 (94%)
Frame = +1 / +2
Query: 136 FLASPAGKDEYSQWITASQRSLLEVMAAFPSAKPPLGVFFAAIAPRLQPRYYSISSSPKM 315
F SPAGKDEY+QWI ASQRSLLEVMAAFPSAKPPLGVFFAA+APRLQPR+YSISSSPK+
Sbjct: 104 FWPSPAGKDEYAQWIVASQRSLLEVMAAFPSAKPPLGVFFAAVAPRLQPRFYSISSSPKL 283
Query: 316 APSRIHVTCALVYGPSPTGRIHQGVCSTWMKNTI 417
APSRIHVTCAL YGP+PT RIHQGVCSTWMKNT+
Sbjct: 284 APSRIHVTCALFYGPTPTERIHQGVCSTWMKNTL 385
Score = 183 bits (394), Expect(2) = 2e-057
Identities = 79/94 (84%), Positives = 82/94 (87%)
Frame = -1 / -1
Query: 419 GIVFFIHVEQTPWWILPVGEGP*TNAHVT*ILEGAIFGDDEIE*YRGCRRGAIAAKNTPS 240
G VFFIHVEQTPWWIL VG GP* NAHVT*ILEGA FGDD++E* RGCRRGA AAKNTP
Sbjct: 387 GSVFFIHVEQTPWWILSVGVGP*NNAHVT*ILEGANFGDDDME*NRGCRRGATAAKNTPK 208
Query: 239 GGLAEGNAAITSRRLL*LAVIH*EYSSFPAGEAK 138
GGLAEGNAAITSRRLL LA IH* YSSFPAGE +
Sbjct: 207 GGLAEGNAAITSRRLLWLATIH*AYSSFPAGEGQ 106
Score = 151 bits (324), Expect(2) = 3e-047
Identities = 65/90 (72%), Positives = 69/90 (76%)
Frame = -3 / -3
Query: 414 CILHPC*TNSLVDPSCW*RPIN*CTCYMNSGGSHLWR**N*VVSWLQTRSYCCEKHSQWW 235
C+LHPC TNSLVDP CW RPI *C YMNS GS LWR** V SWL TRSY C+++ Q
Sbjct: 382 CVLHPCRTNSLVDPFCWCRPIK*CARYMNSRGSQLWR**YGVESWL*TRSYRCKEYPQGR 203
Query: 234 LS*RECSHNFKKTPLTSSYPLRILILSSRR 145
S*RECSHNFKK PL S YPL ILILSSRR
Sbjct: 202 FS*RECSHNFKKAPLASYYPLSILILSSRR 113
Score = 136 bits (292), Expect(2) = 2e-035
Identities = 65/94 (69%), Positives = 73/94 (77%)
Frame = -2 / -2
Query: 418 ELYSSSMLNKLLGGSFLLVKAHKLMHMLHEFWREPSLEMMKLSSIVVADEELLLRKTLPV 239
E+ SSSM NKLLGGSFLLV AHK+M LHEF REP+LEMM S IV DEEL L++ P
Sbjct: 386 EVCSSSMSNKLLGGSFLLV*AHKIMRTLHEF*REPTLEMMIWSRIVAVDEELPLQRIPPR 207
Query: 238 VA*LKGMQP*LQEDSSD*QLSIENTHPFQQERPR 137
*LKGMQP*LQE SS * LSIE+THPFQQE+ +
Sbjct: 206 AV*LKGMQP*LQEGSSG*LLSIEHTHPFQQEKAK 105
Score = 135 bits (289), Expect(2) = 5e-033
Identities = 60/94 (63%), Positives = 67/94 (71%)
Frame = +3 / +1
Query: 138 LGLSCWKG*VFSMDNCXXXXXXXXYGCIPFS*ATTGSVFRSNSSSSATTILLNFIISKDG 317
L SCWKG*V SMD+ YGCIPFS* G + S SSSS TILL+ IISK G
Sbjct: 106 LAFSCWKG*VCSMDSS*PEEPS*SYGCIPFS*TALGGILCSGSSSSTATILLHIIISKVG 285
Query: 318 SLQNSCNMCISLWAFTNRKDPPRSLFNMDEEYNS 419
SL NSCN+ I LWA+TNRKDPPRSLF+MDEE+ S
Sbjct: 286 SL*NSCNVRIILWAYTNRKDPPRSLFDMDEEHTS 387
Score = 96.8 bits (205), Expect(2) = 2e-023
Identities = 39/54 (72%), Positives = 45/54 (83%)
Frame = +2 / +3
Query: 257 QQ*LLVCNHDTTQFHHLQRWLPPEFM*HVH*FMGLHQQEGSTKEFVQHG*RIQF 418
Q+*LLV +HD+T +HHLQ WLP EFM* H FMGLHQQ+GSTKEFV+HG*R F
Sbjct: 225 QR*LLVYSHDSTPYHHLQSWLPLEFM*RAHYFMGLHQQKGSTKEFVRHG*RTHF 386
Score = 60.2 bits (125), Expect(2) = 2e-057
Identities = 26/38 (68%), Positives = 31/38 (81%)
Frame = -2 / -3
Query: 151 QERPRT*VVQLQLDQMHEKLKQAKQPSSVD*VDQHIVE 38
+ RP+T VVQLQL Q HE+LKQ+KQPS +*V QHIVE
Sbjct: 118 RRRPKTSVVQLQLGQKHEQLKQSKQPSLAN*VSQHIVE 5
Score = 58.3 bits (121), Expect(2) = 3e-047
Identities = 27/36 (75%), Positives = 31/36 (86%)
Frame = -3 / -1
Query: 144 GQEPKSFSFSWIRCMRS*SKQSSLLRWIE*ISIS*K 37
GQ+P+SFSFSW+R M S*S QSSLL IE*+SIS*K
Sbjct: 111 GQKPQSFSFSWVRSMSS*SSQSSLLWRIE*VSIS*K 4
Score = 33.6 bits (67), Expect(2) = 2e-035
Identities = 17/41 (41%), Positives = 19/41 (46%)
Frame = -1 / -2
Query: 158 FPAGEAKNLXXXXXXXXXXXXXXXXXXAFFGGLSRSAYRRS 36
F +AKNL AFFG LS+SAYRRS
Sbjct: 125 FQQEKAKNLSRSASAGSEA*AAKAVKAAFFGELSKSAYRRS 3
Score = 33.1 bits (66), Expect(2) = 2e-023
Identities = 15/19 (78%), Positives = 16/19 (84%)
Frame = +2 / +3
Query: 146 LLLERMSILNG*LLVRGVF 202
LLLERMS+LNG* L RG F
Sbjct: 114 LLLERMSMLNG**LARGAF 170
Score = 27.2 bits (53), Expect(2) = 4e-055
Identities = 10/13 (76%), Positives = 11/13 (84%)
Frame = +2 / +2
Query: 38 FYDMLIYSIHRRR 76
FYDML YSI +RR
Sbjct: 5 FYDMLTYSIRQRR 43
Score = 26.7 bits (52), Expect(2) = 5e-033
Identities = 14/37 (37%), Positives = 14/37 (37%)
Frame = +1 / +1
Query: 34 ALLRYXXXXXXXXXXXXXXXXXXXXXXXEAERLRFLA 144
ALLRY EAERLRFLA
Sbjct: 1 ALLRYADLLNSPKKAALTALAAHASDPAEAERLRFLA 111
>gb|BF256777.3|BF256777 HVSMEf0010P19f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEf0010P19f, mRNA sequence
Length = 608
Score = 197 bits (424), Expect = 1e-049
Identities = 77/100 (77%), Positives = 89/100 (89%)
Frame = +1 / +2
Query: 673 EEGALSELIVAFSREGPTKEYVQHKMVEKATDIWNIISNGGYLYVCGDAKGMARDVHKML 852
E GALSEL+VAFSREGPT+EY QHKM KA D+W+I+S+GGY+YVCGDAKGMARDVH+ L
Sbjct: 5 ESGALSELVVAFSREGPTREYFQHKMA*KAADLWSIVSHGGYVYVCGDAKGMARDVHRAL 184
Query: 853 HTIVQEQGSLDNSKTESYVKSLQMEGRYLRDVW*HITSNK 972
HTIVQEQGSLD+SKTE YVK+LQ EGRYLRDVW*H+ +
Sbjct: 185 HTIVQEQGSLDSSKTEGYVKNLQTEGRYLRDVW*HLLGKR 304
Score = 140 bits (300), Expect = 2e-032
Identities = 63/99 (63%), Positives = 72/99 (72%)
Frame = -1 / -3
Query: 968 FEVMCHHTSRRYLPSICRLFT*LSVLELSKDPCSWTIV*SILCTSLAIPLASPQTYK*PP 789
F C+ TS RYLPS+ R FT* SVLELS++PCS T+V S CTSLA+PLASPQTY *PP
Sbjct: 300 FPSKCYQTSLRYLPSV*RFFT*PSVLELSREPCS*TMVCSARCTSLAMPLASPQTYT*PP 121
Query: 788 FEMMFQISVAFSTILCCTYSFVGPSRENATISSESAPSS 672
+E M S AF ILC YS VGPSRE AT +S+ AP S
Sbjct: 120 WETMLHRSAAFYAILCWKYSLVGPSREKATTNSDRAPDS 4
>gb|BE215462.1|BE215462 HV_CEb0006N21f Hordeum vulgare seedling green leaf EST library
HVcDNA0005 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEb0006N21f, mRNA sequence
Length = 949
Score = 168 bits (362), Expect(2) = 5e-046
Identities = 67/96 (69%), Positives = 80/96 (83%)
Frame = +1 / +3
Query: 529 GLAPFRGFLQERLALKQSGAELGTSILFFGCRNRNMDYIYEDELQTFLEEGALSELIVAF 708
GLAPFRGFLQERLALK++G ELG +ILFFGCRNR MD+IYEDEL F E GALSEL+V+F
Sbjct: 3 GLAPFRGFLQERLALKETGVELGRAILFFGCRNRQMDFIYEDELNNFTESGALSELVVSF 182
Query: 709 SREGPTKEYVQHKMVEKATDIWNIISNGGYLYVCGD 816
S EGPTKEYVQHKM +KA ++W+I+ G +V G+
Sbjct: 183 SGEGPTKEYVQHKMAKKAANLWDIVGPRGLWWVGGE 290
Score = 127 bits (271), Expect = 2e-028
Identities = 60/105 (57%), Positives = 67/105 (63%)
Frame = -1 / -1
Query: 842 CTSLAIPLASPQTYK*PPFEMMFQISVAFSTILCCTYSFVGPSRENATISSESAPSSRKV 663
C S +SP T+ P M AF ILCCTYSFVGPS E T +S+ AP S K+
Sbjct: 316 CLSPRPSPSSPPTHHSPLGPTMSHRFAAFFAILCCTYSFVGPSPEKLTTNSDRAPDSVKL 137
Query: 662 CNSSSYM*SILRFLHPKKRIEVPSSAPDCFSANLSCKKPLKGASP 528
+SSSYM SI RFLHPK R+ PSS P F ANLSCKKPLKGA P
Sbjct: 136 FSSSSYMKSI*RFLHPKNRMARPSSTPVSFKANLSCKKPLKGARP 2
Score = 36.8 bits (74), Expect(2) = 5e-046
Identities = 14/31 (45%), Positives = 22/31 (70%)
Frame = +1 / +1
Query: 802 YVCGDAKGMARDVHKMLHTIVQEQGSLDNSK 894
+V A G+ RD+H+ L T+ EQGS+DN++
Sbjct: 280 WVARMAMGVGRDMHRALDTVGGEQGSVDNAR 372
>gb|BQ657817.1|BQ657817 HA06O04u HA Hordeum vulgare subsp. vulgare cDNA clone HA06O04
3-PRIME, mRNA sequence
Length = 587
Score = 170 bits (366), Expect(3) = 1e-044
Identities = 65/77 (84%), Positives = 75/77 (97%)
Frame = +1 / -2
Query: 724 TKEYVQHKMVEKATDIWNIISNGGYLYVCGDAKGMARDVHKMLHTIVQEQGSLDNSKTES 903
TKEYVQHKM++KAT+IWN+IS GGY+YVCGDAKGMA+DVH++LHTIVQ+QGSLDNSKTE
Sbjct: 586 TKEYVQHKMIDKATEIWNVISQGGYIYVCGDAKGMAKDVHRVLHTIVQKQGSLDNSKTEL 407
Query: 904 YVKSLQMEGRYLRDVW* 954
YVK+LQMEGRYLRDVW*
Sbjct: 406 YVKNLQMEGRYLRDVW* 356
Score = 141 bits (302), Expect(2) = 1e-033
Identities = 61/78 (78%), Positives = 63/78 (80%)
Frame = -1 / +3
Query: 956 CHHTSRRYLPSICRLFT*LSVLELSKDPCSWTIV*SILCTSLAIPLASPQTYK*PPFEMM 777
C+HTSRRYLPSICR FT SV ELSKDPC TIV* LCTS A+PLASPQTY *PP EM
Sbjct: 354 CYHTSRRYLPSICRFFTYSSVFELSKDPCF*TIV*RTLCTSFAMPLASPQTYM*PP*EMT 533
Query: 776 FQISVAFSTILCCTYSFV 723
FQISVA S ILCCTYS V
Sbjct: 534 FQISVALSIILCCTYSLV 587
Score = 131 bits (280), Expect(2) = 3e-030
Identities = 54/78 (69%), Positives = 63/78 (80%)
Frame = +3 / -1
Query: 723 NERICAA*DGGKGHRYLEHHLKWWLLICLR*CQGNG*RCTQNASYNSPRAGIFG*LQNRE 902
N+RICAA*D +GHR LE HL WL ICL *CQG+G CTQ +S+NS AGIFG*L+NR
Sbjct: 587 NQRICAA*DD*QGHRDLERHLSRWLHICLW*CQGHGEGCTQGSSHNSSEAGIFG*LENRA 408
Query: 903 LCKEPADGRKVPP*CMVT 956
+CKEP DGR+VPP*C+VT
Sbjct: 407 VCKEPTDGRQVPP*CVVT 354
Score = 128 bits (274), Expect = 7e-029
Identities = 55/79 (69%), Positives = 65/79 (82%)
Frame = -3 / +2
Query: 963 GDVSPYITEVPSFHLQALYIALGFGVIQRSLLLDYCMKHFVYISSHSLGITANI*VTTI* 784
G + P+ITEVP+FHL LYI LGF VIQRSLLL+YC+K+ VYI H+LGIT NI VTT+
Sbjct: 347 GVLLPHITEVPAFHL*VLYIQLGFRVIQRSLLLNYCVKNPVYILRHALGITTNIYVTTLR 526
Query: 783 DDVPNICGLFHHLMLHIFF 727
DDVPN+ GL +HLMLHIFF
Sbjct: 527 DDVPNLGGLVNHLMLHIFF 583
Score = 122 bits (260), Expect = 6e-027
Identities = 52/76 (68%), Positives = 54/76 (71%)
Frame = -2 / +1
Query: 955 VTIHHGGTFLPSAGSLHSSRFWSYPKIPALGLLYEAFCVHL*PFPWHHRKHISNHHLR*C 776
VT HHGGT LPS GSLH++RF SYPKIPA LL E CVH P PWHH KHI NH R*
Sbjct: 355 VTTHHGGTCLPSVGSLHTARFSSYPKIPASELLCEEPCVHPSPCPWHHHKHICNHLER*R 534
Query: 775 SKYLWPFPPSYAAHIL 728
SK WP SYAAHIL
Sbjct: 535 SKSRWPCQSSYAAHIL 582
Score = 122 bits (260), Expect = 6e-027
Identities = 53/80 (66%), Positives = 57/80 (71%)
Frame = +2 / -3
Query: 728 KNMCSIRWWKRPQIFGTSSQMVVTYMFAVMPREWLEMYTKCFIQ*SKSRDLWITPKPRAM 907
KNMCSIR RP FGTSS VVTYMF VMPR W MYT F Q* +SRDLWIT KP M
Sbjct: 582 KNMCSIR*LTRPPRFGTSSLKVVTYMFVVMPRAWRRMYTGFFTQ*FRSRDLWITRKPSCM 403
Query: 908 *RACRWKEGTSVMYGDTSPQ 967
*R RWK GTSVM G+ +P+
Sbjct: 402 *RTYRWKAGTSVMCGNNTPR 343
Score = 27.2 bits (53), Expect(3) = 1e-044
Identities = 9/15 (60%), Positives = 14/15 (93%)
Frame = +2 / -2
Query: 1085 VDQCNSLTSNYLLLY 1129
V++CNSLTSN +L++
Sbjct: 223 VNRCNSLTSNMVLIF 179
Score = 25.8 bits (50), Expect(3) = 1e-044
Identities = 7/20 (35%), Positives = 13/20 (65%)
Frame = +3 / -2
Query: 1116 IYYYMRWEELMENKCCCRFV 1175
+ ++ W + +NKCCCR +
Sbjct: 190 VLIFIVWMDG*KNKCCCRLL 131
Score = 24.4 bits (47), Expect(2) = 3e-030
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = +3 / -3
Query: 1083 ELISAIL*HLTIYYYMRWEELME 1151
ELI IL*HLT + Y+ + ++E
Sbjct: 225 ELIGVIL*HLTWF*YLLYGWMVE 157
Score = 22.6 bits (43), Expect(2) = 1e-033
Identities = 9/11 (81%), Positives = 9/11 (81%)
Frame = -2 / +2
Query: 1114 VRCQRIALINS 1082
VRCQRI INS
Sbjct: 194 VRCQRITPINS 226
>gb|BQ664626.1|BQ664626 HV04C11u HV Hordeum vulgare subsp. vulgare cDNA clone HV04C11
3-PRIME, mRNA sequence
Length = 583
Score = 168 bits (361), Expect(3) = 6e-044
Identities = 64/76 (84%), Positives = 74/76 (97%)
Frame = +1 / -3
Query: 727 KEYVQHKMVEKATDIWNIISNGGYLYVCGDAKGMARDVHKMLHTIVQEQGSLDNSKTESY 906
KEYVQHKM++KAT+IWN+IS GGY+YVCGDAKGMA+DVH++LHTIVQ+QGSLDNSKTE Y
Sbjct: 581 KEYVQHKMIDKATEIWNVISQGGYIYVCGDAKGMAKDVHRVLHTIVQKQGSLDNSKTELY 402
Query: 907 VKSLQMEGRYLRDVW* 954
VK+LQMEGRYLRDVW*
Sbjct: 401 VKNLQMEGRYLRDVW* 354
Score = 139 bits (298), Expect(2) = 5e-033
Identities = 60/76 (78%), Positives = 62/76 (81%)
Frame = -1 / +1
Query: 956 CHHTSRRYLPSICRLFT*LSVLELSKDPCSWTIV*SILCTSLAIPLASPQTYK*PPFEMM 777
C+HTSRRYLPSICR FT SV ELSKDPC TIV* LCTS A+PLASPQTY *PP EM
Sbjct: 352 CYHTSRRYLPSICRFFTYSSVFELSKDPCF*TIV*RTLCTSFAMPLASPQTYM*PP*EMT 531
Query: 776 FQISVAFSTILCCTYS 729
FQISVA S ILCCTYS
Sbjct: 532 FQISVALSIILCCTYS 579
Score = 128 bits (274), Expect = 7e-029
Identities = 55/79 (69%), Positives = 65/79 (82%)
Frame = -3 / +3
Query: 963 GDVSPYITEVPSFHLQALYIALGFGVIQRSLLLDYCMKHFVYISSHSLGITANI*VTTI* 784
G + P+ITEVP+FHL LYI LGF VIQRSLLL+YC+K+ VYI H+LGIT NI VTT+
Sbjct: 345 GVLLPHITEVPAFHL*VLYIQLGFRVIQRSLLLNYCVKNPVYILRHALGITTNIYVTTLR 524
Query: 783 DDVPNICGLFHHLMLHIFF 727
DDVPN+ GL +HLMLHIFF
Sbjct: 525 DDVPNLGGLVNHLMLHIFF 581
Score = 128 bits (274), Expect(2) = 2e-029
Identities = 53/77 (68%), Positives = 62/77 (80%)
Frame = +3 / -2
Query: 726 ERICAA*DGGKGHRYLEHHLKWWLLICLR*CQGNG*RCTQNASYNSPRAGIFG*LQNREL 905
+RICAA*D +GHR LE HL WL ICL *CQG+G CTQ +S+NS AGIFG*L+NR +
Sbjct: 582 QRICAA*DD*QGHRDLERHLSRWLHICLW*CQGHGEGCTQGSSHNSSEAGIFG*LENRAV 403
Query: 906 CKEPADGRKVPP*CMVT 956
CKEP DGR+VPP*C+VT
Sbjct: 402 CKEPTDGRQVPP*CVVT 352
Score = 122 bits (260), Expect = 6e-027
Identities = 52/76 (68%), Positives = 54/76 (71%)
Frame = -2 / +2
Query: 955 VTIHHGGTFLPSAGSLHSSRFWSYPKIPALGLLYEAFCVHL*PFPWHHRKHISNHHLR*C 776
VT HHGGT LPS GSLH++RF SYPKIPA LL E CVH P PWHH KHI NH R*
Sbjct: 353 VTTHHGGTCLPSVGSLHTARFSSYPKIPASELLCEEPCVHPSPCPWHHHKHICNHLER*R 532
Query: 775 SKYLWPFPPSYAAHIL 728
SK WP SYAAHIL
Sbjct: 533 SKSRWPCQSSYAAHIL 580
Score = 122 bits (260), Expect = 6e-027
Identities = 53/80 (66%), Positives = 57/80 (71%)
Frame = +2 / -1
Query: 728 KNMCSIRWWKRPQIFGTSSQMVVTYMFAVMPREWLEMYTKCFIQ*SKSRDLWITPKPRAM 907
KNMCSIR RP FGTSS VVTYMF VMPR W MYT F Q* +SRDLWIT KP M
Sbjct: 580 KNMCSIR*LTRPPRFGTSSLKVVTYMFVVMPRAWRRMYTGFFTQ*FRSRDLWITRKPSCM 401
Query: 908 *RACRWKEGTSVMYGDTSPQ 967
*R RWK GTSVM G+ +P+
Sbjct: 400 *RTYRWKAGTSVMCGNNTPR 341
Score = 27.2 bits (53), Expect(3) = 6e-044
Identities = 9/15 (60%), Positives = 14/15 (93%)
Frame = +2 / -3
Query: 1085 VDQCNSLTSNYLLLY 1129
V++CNSLTSN +L++
Sbjct: 221 VNRCNSLTSNMVLIF 177
Score = 25.8 bits (50), Expect(3) = 6e-044
Identities = 7/20 (35%), Positives = 13/20 (65%)
Frame = +3 / -3
Query: 1116 IYYYMRWEELMENKCCCRFV 1175
+ ++ W + +NKCCCR +
Sbjct: 188 VLIFIVWMDG*KNKCCCRLL 129
Score = 24.4 bits (47), Expect(2) = 2e-029
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = +3 / -1
Query: 1083 ELISAIL*HLTIYYYMRWEELME 1151
ELI IL*HLT + Y+ + ++E
Sbjct: 223 ELIGVIL*HLTWF*YLLYGWMVE 155
Score = 22.6 bits (43), Expect(2) = 5e-033
Identities = 9/11 (81%), Positives = 9/11 (81%)
Frame = -2 / +3
Query: 1114 VRCQRIALINS 1082
VRCQRI INS
Sbjct: 192 VRCQRITPINS 224
>gb|CB876029.1|CB876029 HX10B04w HX Hordeum vulgare subsp. vulgare cDNA clone HX10B04
3-PRIME, mRNA sequence
Length = 579
Score = 166 bits (356), Expect(3) = 3e-043
Identities = 63/75 (84%), Positives = 73/75 (97%)
Frame = +1 / -2
Query: 730 EYVQHKMVEKATDIWNIISNGGYLYVCGDAKGMARDVHKMLHTIVQEQGSLDNSKTESYV 909
EYVQHKM++KAT+IWN+IS GGY+YVCGDAKGMA+DVH++LHTIVQ+QGSLDNSKTE YV
Sbjct: 578 EYVQHKMIDKATEIWNVISQGGYIYVCGDAKGMAKDVHRVLHTIVQKQGSLDNSKTELYV 399
Query: 910 KSLQMEGRYLRDVW* 954
K+LQMEGRYLRDVW*
Sbjct: 398 KNLQMEGRYLRDVW* 354
Score = 139 bits (298), Expect(2) = 5e-033
Identities = 60/76 (78%), Positives = 62/76 (81%)
Frame = -1 / +1
Query: 956 CHHTSRRYLPSICRLFT*LSVLELSKDPCSWTIV*SILCTSLAIPLASPQTYK*PPFEMM 777
C+HTSRRYLPSICR FT SV ELSKDPC TIV* LCTS A+PLASPQTY *PP EM
Sbjct: 352 CYHTSRRYLPSICRFFTYSSVFELSKDPCF*TIV*RTLCTSFAMPLASPQTYM*PP*EMT 531
Query: 776 FQISVAFSTILCCTYS 729
FQISVA S ILCCTYS
Sbjct: 532 FQISVALSIILCCTYS 579
Score = 127 bits (272), Expect(2) = 3e-029
Identities = 53/76 (69%), Positives = 61/76 (80%)
Frame = +3 / -1
Query: 729 RICAA*DGGKGHRYLEHHLKWWLLICLR*CQGNG*RCTQNASYNSPRAGIFG*LQNRELC 908
RICAA*D +GHR LE HL WL ICL *CQG+G CTQ +S+NS AGIFG*L+NR +C
Sbjct: 579 RICAA*DD*QGHRDLERHLSRWLHICLW*CQGHGEGCTQGSSHNSSEAGIFG*LENRAVC 400
Query: 909 KEPADGRKVPP*CMVT 956
KEP DGR+VPP*C+VT
Sbjct: 399 KEPTDGRQVPP*CVVT 352
Score = 125 bits (268), Expect = 5e-028
Identities = 54/78 (69%), Positives = 64/78 (82%)
Frame = -3 / +3
Query: 963 GDVSPYITEVPSFHLQALYIALGFGVIQRSLLLDYCMKHFVYISSHSLGITANI*VTTI* 784
G + P+ITEVP+FHL LYI LGF VIQRSLLL+YC+K+ VYI H+LGIT NI VTT+
Sbjct: 345 GVLLPHITEVPAFHL*VLYIQLGFRVIQRSLLLNYCVKNPVYILRHALGITTNIYVTTLR 524
Query: 783 DDVPNICGLFHHLMLHIF 730
DDVPN+ GL +HLMLHIF
Sbjct: 525 DDVPNLGGLVNHLMLHIF 578
Score = 120 bits (256), Expect = 2e-026
Identities = 51/75 (68%), Positives = 53/75 (70%)
Frame = -2 / +2
Query: 955 VTIHHGGTFLPSAGSLHSSRFWSYPKIPALGLLYEAFCVHL*PFPWHHRKHISNHHLR*C 776
VT HHGGT LPS GSLH++RF SYPKIPA LL E CVH P PWHH KHI NH R*
Sbjct: 353 VTTHHGGTCLPSVGSLHTARFSSYPKIPASELLCEEPCVHPSPCPWHHHKHICNHLER*R 532
Query: 775 SKYLWPFPPSYAAHI 731
SK WP SYAAHI
Sbjct: 533 SKSRWPCQSSYAAHI 577
Score = 119 bits (255), Expect = 3e-026
Identities = 52/79 (65%), Positives = 56/79 (70%)
Frame = +2 / -3
Query: 731 NMCSIRWWKRPQIFGTSSQMVVTYMFAVMPREWLEMYTKCFIQ*SKSRDLWITPKPRAM* 910
NMCSIR RP FGTSS VVTYMF VMPR W MYT F Q* +SRDLWIT KP M*
Sbjct: 577 NMCSIR*LTRPPRFGTSSLKVVTYMFVVMPRAWRRMYTGFFTQ*FRSRDLWITRKPSCM* 398
Query: 911 RACRWKEGTSVMYGDTSPQ 967
R RWK GTSVM G+ +P+
Sbjct: 397 RTYRWKAGTSVMCGNNTPR 341
Score = 27.2 bits (53), Expect(3) = 3e-043
Identities = 9/15 (60%), Positives = 14/15 (93%)
Frame = +2 / -2
Query: 1085 VDQCNSLTSNYLLLY 1129
V++CNSLTSN +L++
Sbjct: 221 VNRCNSLTSNMVLIF 177
Score = 25.8 bits (50), Expect(3) = 3e-043
Identities = 7/20 (35%), Positives = 13/20 (65%)
Frame = +3 / -2
Query: 1116 IYYYMRWEELMENKCCCRFV 1175
+ ++ W + +NKCCCR +
Sbjct: 188 VLIFIVWMDG*KNKCCCRLL 129
Score = 24.4 bits (47), Expect(2) = 3e-029
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = +3 / -3
Query: 1083 ELISAIL*HLTIYYYMRWEELME 1151
ELI IL*HLT + Y+ + ++E
Sbjct: 223 ELIGVIL*HLTWF*YLLYGWMVE 155
Score = 22.6 bits (43), Expect(2) = 5e-033
Identities = 9/11 (81%), Positives = 9/11 (81%)
Frame = -2 / +3
Query: 1114 VRCQRIALINS 1082
VRCQRI INS
Sbjct: 192 VRCQRITPINS 224
>gb|BF616053.1|BF616053 HVSMEc0001F09f Hordeum vulgare seedling shoot EST library
HVcDNA0003 (Etiolated and unstressed) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEc0001F09f, mRNA sequence
Length = 630
Score = 166 bits (357), Expect = 3e-040
Identities = 64/82 (78%), Positives = 72/82 (87%)
Frame = +1 / +1
Query: 400 WMKNTIPLEYSEECSWAPIFVRQSNFKLPADPSTPIIMIGPGTGLAPFRGFLQERLALKQ 579
WM N+ P E SEECSWAPIFVRQSNFKLPADP+ PIIM+GPGTGLAPFRGFLQERLALK
Sbjct: 49 WMTNSTPSEESEECSWAPIFVRQSNFKLPADPTVPIIMVGPGTGLAPFRGFLQERLALKD 228
Query: 580 SGAELGTSILFFGCRNRNMDYI 645
+G ELG +ILFFGC+NR +D +
Sbjct: 229 TGVELGRAILFFGCKNRQIDNV 294
Score = 135 bits (289), Expect = 6e-031
Identities = 57/79 (72%), Positives = 62/79 (78%)
Frame = -1 / -2
Query: 638 SILRFLHPKKRIEVPSSAPDCFSANLSCKKPLKGASPVPGPIMIIGVDGSAGNLKFDCLT 459
SI RFLHPK R+ PSS P F ANLSCKKPLKGA PVPGP ++IG GSAGNLKFDCLT
Sbjct: 287 SIWRFLHPKNRMARPSSTPVSFKANLSCKKPLKGARPVPGPTIMIGTVGSAGNLKFDCLT 108
Query: 458 NMGAQLHSSLYSRGIVFFI 402
+GAQLHSSL S G+ F I
Sbjct: 107 KIGAQLHSSLSSDGVEFVI 51
>gb|BU986511.1|BU986511 HF12B08r HF Hordeum vulgare subsp. vulgare cDNA clone HF12B08
5-PRIME, mRNA sequence
Length = 589
Score = 148 bits (317), Expect(3) = 6e-038
Identities = 56/68 (82%), Positives = 66/68 (97%)
Frame = +1 / +3
Query: 751 VEKATDIWNIISNGGYLYVCGDAKGMARDVHKMLHTIVQEQGSLDNSKTESYVKSLQMEG 930
++KAT+IWN+IS GGY+YVCGDAKGMA+DVH++LHTIVQ+QGSLDNSKTE YVK+LQMEG
Sbjct: 12 IDKATEIWNVISQGGYIYVCGDAKGMAKDVHRVLHTIVQKQGSLDNSKTELYVKNLQMEG 191
Query: 931 RYLRDVW* 954
RYLRDVW*
Sbjct: 192 RYLRDVW* 215
Score = 120 bits (257), Expect(2) = 2e-027
Identities = 53/68 (77%), Positives = 55/68 (80%)
Frame = -1 / -1
Query: 956 CHHTSRRYLPSICRLFT*LSVLELSKDPCSWTIV*SILCTSLAIPLASPQTYK*PPFEMM 777
C+HTSRRYLPSICR FT SV ELSKDPC TIV* LCTS A+PLASPQTY *PP EM
Sbjct: 217 CYHTSRRYLPSICRFFTYSSVFELSKDPCF*TIV*RTLCTSFAMPLASPQTYM*PP*EMT 38
Query: 776 FQISVAFS 753
FQISVA S
Sbjct: 37 FQISVALS 14
Score = 114 bits (244), Expect(2) = 2e-025
Identities = 46/67 (68%), Positives = 54/67 (80%)
Frame = +3 / +2
Query: 756 KGHRYLEHHLKWWLLICLR*CQGNG*RCTQNASYNSPRAGIFG*LQNRELCKEPADGRKV 935
+GHR LE HL WL ICL *CQG+G CTQ +S+NS AGIFG*L+NR +CKEP DGR+V
Sbjct: 17 QGHRDLERHLSRWLHICLW*CQGHGEGCTQGSSHNSSEAGIFG*LENRAVCKEPTDGRQV 196
Query: 936 PP*CMVT 956
PP*C+VT
Sbjct: 197 PP*CVVT 217
Score = 107 bits (229), Expect = 1e-022
Identities = 45/66 (68%), Positives = 47/66 (71%)
Frame = -2 / -2
Query: 955 VTIHHGGTFLPSAGSLHSSRFWSYPKIPALGLLYEAFCVHL*PFPWHHRKHISNHHLR*C 776
VT HHGGT LPS GSLH++RF SYPKIPA LL E CVH P PWHH KHI NH R*
Sbjct: 216 VTTHHGGTCLPSVGSLHTARFSSYPKIPASELLCEEPCVHPSPCPWHHHKHICNHLER*R 37
Query: 775 SKYLWP 758
SK WP
Sbjct: 36 SKSRWP 19
Score = 107 bits (229), Expect = 1e-022
Identities = 47/69 (68%), Positives = 56/69 (81%)
Frame = -3 / -3
Query: 963 GDVSPYITEVPSFHLQALYIALGFGVIQRSLLLDYCMKHFVYISSHSLGITANI*VTTI* 784
G + P+ITEVP+FHL LYI LGF VIQRSLLL+YC+K+ VYI H+LGIT NI VTT+
Sbjct: 224 GVLLPHITEVPAFHL*VLYIQLGFRVIQRSLLLNYCVKNPVYILRHALGITTNIYVTTLR 45
Query: 783 DDVPNICGL 757
DDVPN+ GL
Sbjct: 44 DDVPNLGGL 18
Score = 107 bits (229), Expect = 1e-022
Identities = 46/70 (65%), Positives = 50/70 (71%)
Frame = +2 / +1
Query: 758 RPQIFGTSSQMVVTYMFAVMPREWLEMYTKCFIQ*SKSRDLWITPKPRAM*RACRWKEGT 937
RP FGTSS VVTYMF VMPR W MYT F Q* +SRDLWIT KP M*R RWK GT
Sbjct: 19 RPPRFGTSSLKVVTYMFVVMPRAWRRMYTGFFTQ*FRSRDLWITRKPSCM*RTYRWKAGT 198
Query: 938 SVMYGDTSPQ 967
SVM G+ +P+
Sbjct: 199 SVMCGNNTPR 228
Score = 27.2 bits (53), Expect(3) = 6e-038
Identities = 9/15 (60%), Positives = 14/15 (93%)
Frame = +2 / +3
Query: 1085 VDQCNSLTSNYLLLY 1129
V++CNSLTSN +L++
Sbjct: 348 VNRCNSLTSNMVLIF 392
Score = 25.8 bits (50), Expect(3) = 6e-038
Identities = 7/20 (35%), Positives = 13/20 (65%)
Frame = +3 / +3
Query: 1116 IYYYMRWEELMENKCCCRFV 1175
+ ++ W + +NKCCCR +
Sbjct: 381 VLIFIVWMDG*KNKCCCRLL 440
Score = 24.4 bits (47), Expect(2) = 2e-025
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = +3 / +1
Query: 1083 ELISAIL*HLTIYYYMRWEELME 1151
ELI IL*HLT + Y+ + ++E
Sbjct: 346 ELIGVIL*HLTWF*YLLYGWMVE 414
Score = 22.6 bits (43), Expect(2) = 2e-027
Identities = 9/11 (81%), Positives = 9/11 (81%)
Frame = -2 / -3
Query: 1114 VRCQRIALINS 1082
VRCQRI INS
Sbjct: 377 VRCQRITPINS 345
>gb|AL502574.1|AL502574 AL502574 Hordeum vulgare Barke roots Hordeum vulgare subsp. vulgare
cDNA clone HW08A19u 3', mRNA sequence
Length = 546
Score = 154 bits (330), Expect = 1e-036
Identities = 60/78 (76%), Positives = 68/78 (87%)
Frame = +1 / -3
Query: 727 KEYVQHKMVEKATDIWNIISNGGYLYVCGDAKGMARDVHKMLHTIVQEQGSLDNSKTESY 906
K QHKM EKA D+W+I+S GGY+YVCGDAKGMARDVH+ LHTIVQEQGSLD+SKTE Y
Sbjct: 442 KSTSQHKMAEKAADLWSIVSQGGYVYVCGDAKGMARDVHRALHTIVQEQGSLDSSKTEGY 263
Query: 907 VKSLQMEGRYLRDVW*HI 960
VK+LQ EGRYLRDVW* +
Sbjct: 262 VKNLQTEGRYLRDVW*QL 209
Score = 111 bits (237), Expect = 9e-024
Identities = 50/76 (65%), Positives = 57/76 (75%)
Frame = -1 / +3
Query: 968 FEVMCHHTSRRYLPSICRLFT*LSVLELSKDPCSWTIV*SILCTSLAIPLASPQTYK*PP 789
F C+ TS RYLPS+ R FT* SVLELS++PCS T+V S CTSLA+PLASPQTY *PP
Sbjct: 201 FRRNCYQTSLRYLPSV*RFFT*PSVLELSREPCS*TMVCSARCTSLAMPLASPQTYT*PP 380
Query: 788 FEMMFQISVAFSTILC 741
+E M S AFS ILC
Sbjct: 381 WETMLHRSAAFSAILC 428
>gb|AL501545.1|AL501545 AL501545 Hordeum vulgare Barke roots Hordeum vulgare subsp. vulgare
cDNA clone HW04I24u 3', mRNA sequence
Length = 569
Score = 142 bits (304), Expect(3) = 3e-036
Identities = 55/66 (83%), Positives = 63/66 (95%)
Frame = +1 / -1
Query: 757 KATDIWNIISNGGYLYVCGDAKGMARDVHKMLHTIVQEQGSLDNSKTESYVKSLQMEGRY 936
KAT+IWN+IS GG +YVCGDAKGMA+DVH++LHTIVQ+QGSLDNSKTE YVK+LQMEGRY
Sbjct: 569 KATEIWNVISQGGXIYVCGDAKGMAKDVHRVLHTIVQKQGSLDNSKTELYVKNLQMEGRY 390
Query: 937 LRDVW* 954
LRDVW*
Sbjct: 389 LRDVW* 372
Score = 116 bits (248), Expect(2) = 3e-026
Identities = 51/66 (77%), Positives = 53/66 (80%)
Frame = -1 / +1
Query: 956 CHHTSRRYLPSICRLFT*LSVLELSKDPCSWTIV*SILCTSLAIPLASPQTYK*PPFEMM 777
C+HTSRRYLPSICR FT SV ELSKDPC TIV* LCTS A+PLASPQTY PP EM
Sbjct: 370 CYHTSRRYLPSICRFFTYSSVFELSKDPCF*TIV*RTLCTSFAMPLASPQTYMXPP*EMT 549
Query: 776 FQISVA 759
FQISVA
Sbjct: 550 FQISVA 567
Score = 111 bits (238), Expect(2) = 1e-024
Identities = 45/66 (68%), Positives = 52/66 (78%)
Frame = +3 / -3
Query: 759 GHRYLEHHLKWWLLICLR*CQGNG*RCTQNASYNSPRAGIFG*LQNRELCKEPADGRKVP 938
GHR LE HL W ICL *CQG+G CTQ +S+NS AGIFG*L+NR +CKEP DGR+VP
Sbjct: 567 GHRDLERHLSRWXHICLW*CQGHGEGCTQGSSHNSSEAGIFG*LENRAVCKEPTDGRQVP 388
Query: 939 P*CMVT 956
P*C+VT
Sbjct: 387 P*CVVT 370
Score = 107 bits (229), Expect = 1e-022
Identities = 47/69 (68%), Positives = 56/69 (81%)
Frame = -3 / +3
Query: 963 GDVSPYITEVPSFHLQALYIALGFGVIQRSLLLDYCMKHFVYISSHSLGITANI*VTTI* 784
G + P+ITEVP+FHL LYI LGF VIQRSLLL+YC+K+ VYI H+LGIT NI VTT+
Sbjct: 363 GVLLPHITEVPAFHL*VLYIQLGFRVIQRSLLLNYCVKNPVYILRHALGITTNIYVTTLR 542
Query: 783 DDVPNICGL 757
DDVPN+ GL
Sbjct: 543 DDVPNLGGL 569
Score = 107 bits (229), Expect = 1e-022
Identities = 46/70 (65%), Positives = 50/70 (71%)
Frame = +2 / -2
Query: 758 RPQIFGTSSQMVVTYMFAVMPREWLEMYTKCFIQ*SKSRDLWITPKPRAM*RACRWKEGT 937
RP FGTSS VVTYMF VMPR W MYT F Q* +SRDLWIT KP M*R RWK GT
Sbjct: 568 RPPRFGTSSLKVVTYMFVVMPRAWRRMYTGFFTQ*FRSRDLWITRKPSCM*RTYRWKAGT 389
Query: 938 SVMYGDTSPQ 967
SVM G+ +P+
Sbjct: 388 SVMCGNNTPR 359
Score = 104 bits (222), Expect = 1e-021
Identities = 44/66 (66%), Positives = 46/66 (69%)
Frame = -2 / +2
Query: 955 VTIHHGGTFLPSAGSLHSSRFWSYPKIPALGLLYEAFCVHL*PFPWHHRKHISNHHLR*C 776
VT HHGGT LPS GSLH++RF SYPKIPA LL E CVH P PWHH KHI H R*
Sbjct: 371 VTTHHGGTCLPSVGSLHTARFSSYPKIPASELLCEEPCVHPSPCPWHHHKHICXHLER*R 550
Query: 775 SKYLWP 758
SK WP
Sbjct: 551 SKSRWP 568
Score = 27.2 bits (53), Expect(3) = 3e-036
Identities = 9/15 (60%), Positives = 14/15 (93%)
Frame = +2 / -1
Query: 1085 VDQCNSLTSNYLLLY 1129
V++CNSLTSN +L++
Sbjct: 239 VNRCNSLTSNMVLIF 195
Score = 25.8 bits (50), Expect(3) = 3e-036
Identities = 7/20 (35%), Positives = 13/20 (65%)
Frame = +3 / -1
Query: 1116 IYYYMRWEELMENKCCCRFV 1175
+ ++ W + +NKCCCR +
Sbjct: 206 VLIFIVWMDG*KNKCCCRLL 147
Score = 24.4 bits (47), Expect(2) = 1e-024
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = +3 / -2
Query: 1083 ELISAIL*HLTIYYYMRWEELME 1151
ELI IL*HLT + Y+ + ++E
Sbjct: 241 ELIGVIL*HLTWF*YLLYGWMVE 173
Score = 22.6 bits (43), Expect(2) = 3e-026
Identities = 9/11 (81%), Positives = 9/11 (81%)
Frame = -2 / +3
Query: 1114 VRCQRIALINS 1082
VRCQRI INS
Sbjct: 210 VRCQRITPINS 242
>gb|CA016485.1|CA016485 HV08K11u HV Hordeum vulgare subsp. vulgare cDNA clone HV08K11
3-PRIME, mRNA sequence
Length = 542
Score = 139 bits (298), Expect(3) = 2e-035
Identities = 53/63 (84%), Positives = 61/63 (96%)
Frame = +1 / -1
Query: 766 DIWNIISNGGYLYVCGDAKGMARDVHKMLHTIVQEQGSLDNSKTESYVKSLQMEGRYLRD 945
+IWN+IS GGY+YVCGDAKGMA+DVH++LHTIVQ+QGSLDNSKTE YVK+LQMEGRYLRD
Sbjct: 542 EIWNVISQGGYIYVCGDAKGMAKDVHRVLHTIVQKQGSLDNSKTELYVKNLQMEGRYLRD 363
Query: 946 VW* 954
VW*
Sbjct: 362 VW* 354
Score = 113 bits (241), Expect(2) = 3e-025
Identities = 49/63 (77%), Positives = 51/63 (80%)
Frame = -1 / +1
Query: 956 CHHTSRRYLPSICRLFT*LSVLELSKDPCSWTIV*SILCTSLAIPLASPQTYK*PPFEMM 777
C+HTSRRYLPSICR FT SV ELSKDPC TIV* LCTS A+PLASPQTY *PP EM
Sbjct: 352 CYHTSRRYLPSICRFFTYSSVFELSKDPCF*TIV*RTLCTSFAMPLASPQTYM*PP*EMT 531
Query: 776 FQI 768
FQI
Sbjct: 532 FQI 540
Score = 106 bits (227), Expect(2) = 4e-023
Identities = 43/62 (69%), Positives = 50/62 (80%)
Frame = +3 / -3
Query: 771 LEHHLKWWLLICLR*CQGNG*RCTQNASYNSPRAGIFG*LQNRELCKEPADGRKVPP*CM 950
LE HL WL ICL *CQG+G CTQ +S+NS AGIFG*L+NR +CKEP DGR+VPP*C+
Sbjct: 537 LERHLSRWLHICLW*CQGHGEGCTQGSSHNSSEAGIFG*LENRAVCKEPTDGRQVPP*CV 358
Query: 951 VT 956
VT
Sbjct: 357 VT 352
Score = 104 bits (222), Expect = 1e-021
Identities = 45/66 (68%), Positives = 54/66 (81%)
Frame = -3 / +3
Query: 963 GDVSPYITEVPSFHLQALYIALGFGVIQRSLLLDYCMKHFVYISSHSLGITANI*VTTI* 784
G + P+ITEVP+FHL LYI LGF VIQRSLLL+YC+K+ VYI H+LGIT NI VTT+
Sbjct: 345 GVLLPHITEVPAFHL*VLYIQLGFRVIQRSLLLNYCVKNPVYILRHALGITTNIYVTTLR 524
Query: 783 DDVPNI 766
DDVPN+
Sbjct: 525 DDVPNL 542
Score = 104 bits (221), Expect = 1e-021
Identities = 44/66 (66%), Positives = 48/66 (72%)
Frame = +2 / -2
Query: 770 FGTSSQMVVTYMFAVMPREWLEMYTKCFIQ*SKSRDLWITPKPRAM*RACRWKEGTSVMY 949
FGTSS VVTYMF VMPR W MYT F Q* +SRDLWIT KP M*R RWK GTSVM
Sbjct: 538 FGTSSLKVVTYMFVVMPRAWRRMYTGFFTQ*FRSRDLWITRKPSCM*RTYRWKAGTSVMC 359
Query: 950 GDTSPQ 967
G+ +P+
Sbjct: 358 GNNTPR 341
Score = 101 bits (215), Expect = 1e-020
Identities = 43/62 (69%), Positives = 45/62 (72%)
Frame = -2 / +2
Query: 955 VTIHHGGTFLPSAGSLHSSRFWSYPKIPALGLLYEAFCVHL*PFPWHHRKHISNHHLR*C 776
VT HHGGT LPS GSLH++RF SYPKIPA LL E CVH P PWHH KHI NH R*
Sbjct: 353 VTTHHGGTCLPSVGSLHTARFSSYPKIPASELLCEEPCVHPSPCPWHHHKHICNHLER*R 532
Query: 775 SK 770
SK
Sbjct: 533 SK 538
Score = 27.2 bits (53), Expect(3) = 2e-035
Identities = 9/15 (60%), Positives = 14/15 (93%)
Frame = +2 / -1
Query: 1085 VDQCNSLTSNYLLLY 1129
V++CNSLTSN +L++
Sbjct: 221 VNRCNSLTSNMVLIF 177
Score = 25.8 bits (50), Expect(3) = 2e-035
Identities = 7/20 (35%), Positives = 13/20 (65%)
Frame = +3 / -1
Query: 1116 IYYYMRWEELMENKCCCRFV 1175
+ ++ W + +NKCCCR +
Sbjct: 188 VLIFIVWMDG*KNKCCCRLL 129
Score = 24.4 bits (47), Expect(2) = 4e-023
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = +3 / -2
Query: 1083 ELISAIL*HLTIYYYMRWEELME 1151
ELI IL*HLT + Y+ + ++E
Sbjct: 223 ELIGVIL*HLTWF*YLLYGWMVE 155
Score = 22.6 bits (43), Expect(2) = 3e-025
Identities = 9/11 (81%), Positives = 9/11 (81%)
Frame = -2 / +3
Query: 1114 VRCQRIALINS 1082
VRCQRI INS
Sbjct: 192 VRCQRITPINS 224
>gb|AJ460229.1|AJ460229 AJ460229 S00002 Hordeum vulgare subsp. vulgare cDNA clone
S0000200073H02F1, mRNA sequence
Length = 360
Score = 148 bits (317), Expect = 8e-035
Identities = 56/68 (82%), Positives = 66/68 (97%)
Frame = +1 / +2
Query: 751 VEKATDIWNIISNGGYLYVCGDAKGMARDVHKMLHTIVQEQGSLDNSKTESYVKSLQMEG 930
++KAT+IWN+IS GGY+YVCGDAKGMA+DVH++LHTIVQ+QGSLDNSKTE YVK+LQMEG
Sbjct: 11 IDKATEIWNVISQGGYIYVCGDAKGMAKDVHRVLHTIVQKQGSLDNSKTELYVKNLQMEG 190
Query: 931 RYLRDVW* 954
RYLRDVW*
Sbjct: 191 RYLRDVW* 214
Score = 120 bits (257), Expect = 2e-026
Identities = 53/68 (77%), Positives = 55/68 (80%)
Frame = -1 / -1
Query: 956 CHHTSRRYLPSICRLFT*LSVLELSKDPCSWTIV*SILCTSLAIPLASPQTYK*PPFEMM 777
C+HTSRRYLPSICR FT SV ELSKDPC TIV* LCTS A+PLASPQTY *PP EM
Sbjct: 216 CYHTSRRYLPSICRFFTYSSVFELSKDPCF*TIV*RTLCTSFAMPLASPQTYM*PP*EMT 37
Query: 776 FQISVAFS 753
FQISVA S
Sbjct: 36 FQISVALS 13
Score = 114 bits (244), Expect = 1e-024
Identities = 46/67 (68%), Positives = 54/67 (80%)
Frame = +3 / +1
Query: 756 KGHRYLEHHLKWWLLICLR*CQGNG*RCTQNASYNSPRAGIFG*LQNRELCKEPADGRKV 935
+GHR LE HL WL ICL *CQG+G CTQ +S+NS AGIFG*L+NR +CKEP DGR+V
Sbjct: 16 QGHRDLERHLSRWLHICLW*CQGHGEGCTQGSSHNSSEAGIFG*LENRAVCKEPTDGRQV 195
Query: 936 PP*CMVT 956
PP*C+VT
Sbjct: 196 PP*CVVT 216
Score = 109 bits (233), Expect = 3e-023
Identities = 48/73 (65%), Positives = 58/73 (79%)
Frame = -3 / -3
Query: 963 GDVSPYITEVPSFHLQALYIALGFGVIQRSLLLDYCMKHFVYISSHSLGITANI*VTTI* 784
G + P+ITEVP+FHL LYI LGF VIQRSLLL+YC+K+ VYI H+LGIT NI VTT+
Sbjct: 223 GVLLPHITEVPAFHL*VLYIQLGFRVIQRSLLLNYCVKNPVYILRHALGITTNIYVTTLR 44
Query: 783 DDVPNICGLFHHL 745
DDVPN+ GL + L
Sbjct: 43 DDVPNLGGLVNRL 5
Score = 107 bits (229), Expect = 1e-022
Identities = 45/66 (68%), Positives = 47/66 (71%)
Frame = -2 / -2
Query: 955 VTIHHGGTFLPSAGSLHSSRFWSYPKIPALGLLYEAFCVHL*PFPWHHRKHISNHHLR*C 776
VT HHGGT LPS GSLH++RF SYPKIPA LL E CVH P PWHH KHI NH R*
Sbjct: 215 VTTHHGGTCLPSVGSLHTARFSSYPKIPASELLCEEPCVHPSPCPWHHHKHICNHLER*R 36
Query: 775 SKYLWP 758
SK WP
Sbjct: 35 SKSRWP 18
Score = 107 bits (229), Expect = 1e-022
Identities = 46/70 (65%), Positives = 50/70 (71%)
Frame = +2 / +3
Query: 758 RPQIFGTSSQMVVTYMFAVMPREWLEMYTKCFIQ*SKSRDLWITPKPRAM*RACRWKEGT 937
RP FGTSS VVTYMF VMPR W MYT F Q* +SRDLWIT KP M*R RWK GT
Sbjct: 18 RPPRFGTSSLKVVTYMFVVMPRAWRRMYTGFFTQ*FRSRDLWITRKPSCM*RTYRWKAGT 197
Query: 938 SVMYGDTSPQ 967
SVM G+ +P+
Sbjct: 198 SVMCGNNTPR 227
>gb|BI952927.1|BI952927 HVSMEm0008H15f Hordeum vulgare green seedling EST library
HVcDNA0014 (Blumeria infected) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEm0008H15f, mRNA sequence
Length = 575
Score = 128 bits (275), Expect(3) = 3e-032
Identities = 50/60 (83%), Positives = 57/60 (95%)
Frame = +1 / +2
Query: 775 NIISNGGYLYVCGDAKGMARDVHKMLHTIVQEQGSLDNSKTESYVKSLQMEGRYLRDVW* 954
N+IS GGY+YVCGDAKGMA+DVH++LHTIVQ+QGSLDNSKTE YVK+LQ EGRYLRDVW*
Sbjct: 17 NVISQGGYIYVCGDAKGMAKDVHRVLHTIVQKQGSLDNSKTELYVKNLQREGRYLRDVW* 196
Score = 108 bits (230), Expect(2) = 9e-024
Identities = 46/61 (75%), Positives = 49/61 (80%)
Frame = -1 / -3
Query: 956 CHHTSRRYLPSICRLFT*LSVLELSKDPCSWTIV*SILCTSLAIPLASPQTYK*PPFEMM 777
C+HTSRRYLPS+CR FT SV ELSKDPC TIV* LCTS A+PLASPQTY *PP EM
Sbjct: 198 CYHTSRRYLPSLCRFFTYSSVFELSKDPCF*TIV*RTLCTSFAMPLASPQTYM*PP*EMT 19
Query: 776 F 774
F
Sbjct: 18 F 16
Score = 105 bits (223), Expect(2) = 2e-022
Identities = 42/66 (63%), Positives = 51/66 (77%)
Frame = +3 / +1
Query: 759 GHRYLEHHLKWWLLICLR*CQGNG*RCTQNASYNSPRAGIFG*LQNRELCKEPADGRKVP 938
G + E HL WL ICL *CQG+G CTQ +S+NS AGIFG*L+NR +CKEP +GR+VP
Sbjct: 1 GREHGERHLSRWLHICLW*CQGHGEGCTQGSSHNSSEAGIFG*LENRAVCKEPTEGRQVP 180
Query: 939 P*CMVT 956
P*C+VT
Sbjct: 181 P*CVVT 198
Score = 27.2 bits (53), Expect(3) = 3e-032
Identities = 9/15 (60%), Positives = 14/15 (93%)
Frame = +2 / +2
Query: 1085 VDQCNSLTSNYLLLY 1129
V++CNSLTSN +L++
Sbjct: 329 VNRCNSLTSNMVLIF 373
Score = 25.8 bits (50), Expect(3) = 3e-032
Identities = 7/20 (35%), Positives = 13/20 (65%)
Frame = +3 / +2
Query: 1116 IYYYMRWEELMENKCCCRFV 1175
+ ++ W + +NKCCCR +
Sbjct: 362 VLIFIVWMDG*KNKCCCRLL 421
Score = 24.4 bits (47), Expect(2) = 2e-022
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = +3 / +3
Query: 1083 ELISAIL*HLTIYYYMRWEELME 1151
ELI IL*HLT + Y+ + ++E
Sbjct: 327 ELIGVIL*HLTWF*YLLYGWMVE 395
Score = 22.6 bits (43), Expect(2) = 9e-024
Identities = 9/11 (81%), Positives = 9/11 (81%)
Frame = -2 / -2
Query: 1114 VRCQRIALINS 1082
VRCQRI INS
Sbjct: 358 VRCQRITPINS 326
>gb|AV922348.1|AV922348 AV922348 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags3n02 3', mRNA sequence
Length = 459
Score = 127 bits (272), Expect(3) = 4e-032
Identities = 50/58 (86%), Positives = 56/58 (96%)
Frame = +1 / -2
Query: 781 ISNGGYLYVCGDAKGMARDVHKMLHTIVQEQGSLDNSKTESYVKSLQMEGRYLRDVW* 954
IS GGY+YVCGDAKGMA+DVH++LHTIVQ+QGSLDNSKTE YVK+LQMEGRYLRDVW*
Sbjct: 458 ISQGGYIYVCGDAKGMAKDVHRVLHTIVQKQGSLDNSKTELYVKNLQMEGRYLRDVW* 285
Score = 106 bits (227), Expect(2) = 2e-023
Identities = 46/59 (77%), Positives = 48/59 (81%)
Frame = -1 / +1
Query: 956 CHHTSRRYLPSICRLFT*LSVLELSKDPCSWTIV*SILCTSLAIPLASPQTYK*PPFEM 780
C+HTSRRYLPSICR FT SV ELSKDPC TIV* LCTS A+PLASPQTY *PP EM
Sbjct: 283 CYHTSRRYLPSICRFFTYSSVFELSKDPCF*TIV*RTLCTSFAMPLASPQTYM*PP*EM 459
Score = 102 bits (218), Expect(2) = 6e-022
Identities = 41/59 (69%), Positives = 48/59 (81%)
Frame = +3 / -1
Query: 780 HLKWWLLICLR*CQGNG*RCTQNASYNSPRAGIFG*LQNRELCKEPADGRKVPP*CMVT 956
HL WL ICL *CQG+G CTQ +S+NS AGIFG*L+NR +CKEP DGR+VPP*C+VT
Sbjct: 459 HLSRWLHICLW*CQGHGEGCTQGSSHNSSEAGIFG*LENRAVCKEPTDGRQVPP*CVVT 283
Score = 27.2 bits (53), Expect(3) = 4e-032
Identities = 9/15 (60%), Positives = 14/15 (93%)
Frame = +2 / -2
Query: 1085 VDQCNSLTSNYLLLY 1129
V++CNSLTSN +L++
Sbjct: 152 VNRCNSLTSNMVLIF 108
Score = 25.8 bits (50), Expect(3) = 4e-032
Identities = 7/20 (35%), Positives = 13/20 (65%)
Frame = +3 / -2
Query: 1116 IYYYMRWEELMENKCCCRFV 1175
+ ++ W + +NKCCCR +
Sbjct: 119 VLIFIVWMDG*KNKCCCRLL 60
Score = 24.4 bits (47), Expect(2) = 6e-022
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = +3 / -3
Query: 1083 ELISAIL*HLTIYYYMRWEELME 1151
ELI IL*HLT + Y+ + ++E
Sbjct: 154 ELIGVIL*HLTWF*YLLYGWMVE 86
Score = 22.6 bits (43), Expect(2) = 2e-023
Identities = 9/11 (81%), Positives = 9/11 (81%)
Frame = -2 / +3
Query: 1114 VRCQRIALINS 1082
VRCQRI INS
Sbjct: 123 VRCQRITPINS 155
>gb|BG310207.1|BG310207 HVSMEc0016H14f Hordeum vulgare seedling shoot EST library
HVcDNA0003 (Etiolated and unstressed) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEc0016H14f, mRNA sequence
Length = 779
Score = 138 bits (295), Expect = 9e-032
Identities = 56/92 (60%), Positives = 71/92 (77%)
Frame = +1 / -1
Query: 679 GALSELIVAFSREGPTKEYVQHKMVEKATDIWNIISNGGYLYVCGDAKGMARDVHKMLHT 858
GALS+L+V FS GPTKE V HKM E+ D+W+I+S GGY YVCGD+KGM ++V + LH
Sbjct: 590 GALSKLVVPFSCGGPTKEEVHHKMAERVADLWSIVSQGGYGYVCGDSKGMGKNVPRALHP 411
Query: 859 IVQEQGSLDNSKTESYVKSLQMEGRYLRDVW* 954
IV EQG LD+SKT +VK+LQ EG+ L+ VW*
Sbjct: 410 IV*EQGFLDSSKTGGFVKTLQTEGKSLKKVW* 315
>gb|CA010606.1|CA010606 HT09H02u HT Hordeum vulgare subsp. vulgare cDNA clone HT09H02
3-PRIME, mRNA sequence
Length = 438
Score = 113 bits (242), Expect = 2e-024
Identities = 45/54 (83%), Positives = 50/54 (92%)
Frame = +1 / -3
Query: 799 LYVCGDAKGMARDVHKMLHTIVQEQGSLDNSKTESYVKSLQMEGRYLRDVW*HI 960
+YVCGDAKGMARDVH+ LHTIVQEQGSLD+SKTE YVK+LQ EGRYLRDVW* +
Sbjct: 436 VYVCGDAKGMARDVHRALHTIVQEQGSLDSSKTEGYVKNLQTEGRYLRDVW*QL 275
Database: Hordeum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:16 PM
Number of letters in database: 175,134,539
Number of sequences in database: 312,970
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 634,285,431
Number of Sequences: 312970
Number of extensions: 10617355
Number of successful extensions: 47198
Number of sequences better than 1.0e-020: 36
length of database: 58,378,179
effective HSP length: 53
effective length of database: 41,790,769
effective search space used: 16423772217
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)