TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2193041.2.1
(877 letters)
Database: Hordeum_nucl_with_EST.fasta
312,970 sequences; 175,134,539 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BF627260.2|BF627260 HVSMEb0004G03f Hordeum vulgare seedl... 421 e-117
gb|BG418403.2|BG418403 HVSMEk0022J07f Hordeum vulgare testa... 421 e-117
gb|BQ460366.1|BQ460366 HA09O18r HA Hordeum vulgare subsp. v... 419 e-117
gb|BU977345.1|BU977345 HA11E06r HA Hordeum vulgare subsp. v... 419 e-117
gb|CA009098.1|CA009098 HU13C18r HU Hordeum vulgare subsp. v... 419 e-117
gb|BU998242.1|BU998242 HI10G24r HI Hordeum vulgare subsp. v... 413 e-115
gb|CA029760.1|CA029760 HX05C06r HX Hordeum vulgare subsp. v... 413 e-115
gb|CA029893.1|CA029893 HX05I04r HX Hordeum vulgare subsp. v... 413 e-115
gb|CA031805.1|CA031805 HX11C24r HX Hordeum vulgare subsp. v... 413 e-115
gb|CA028584.1|CA028584 HZ62I08r HZ Hordeum vulgare subsp. v... 406 e-112
gb|BU979070.1|BU979070 HA15B06r HA Hordeum vulgare subsp. v... 405 e-112
gb|BU998287.1|BU998287 HI10J07r HI Hordeum vulgare subsp. v... 395 e-109
gb|BQ470360.1|BQ470360 HX02L09r HX Hordeum vulgare subsp. v... 391 e-108
gb|BU990707.1|BU990707 HF25N06r HF Hordeum vulgare subsp. v... 391 e-108
gb|AV936748.1|AV936748 AV936748 K. Sato unpublished cDNA li... 248 e-107
gb|BE602150.2|BE602150 HVSMEh0102M04f Hordeum vulgare 5-45 ... 248 e-107
gb|AL506939.1|AL506939 AL506939 Hordeum vulgare Barke devel... 248 e-107
gb|AV919247.1|AV919247 AV919247 K. Sato unpublished cDNA li... 248 e-107
gb|BQ764842.1|BQ764842 EBca01_SQ005_F02_R carpel, pre-anthe... 248 e-107
gb|BQ469660.1|BQ469660 HZ01H18r HZ Hordeum vulgare subsp. v... 386 e-107
gb|CA018031.1|CA018031 HV07D06r HV Hordeum vulgare subsp. v... 386 e-107
gb|CK122291.1|CK122291 BES1824102m01 BES1824 Hordeum vulgar... 243 e-106
gb|CA013022.1|CA013022 HT07C16r HT Hordeum vulgare subsp. v... 248 e-106
gb|AV913597.1|AV913597 AV913597 K. Sato unpublished cDNA li... 382 e-105
gb|AV914207.1|AV914207 AV914207 K. Sato unpublished cDNA li... 239 e-105
gb|CA031123.1|CA031123 HX09B09r HX Hordeum vulgare subsp. v... 239 e-105
gb|BJ454353.1|BJ454353 BJ454353 K. Sato unpublished cDNA li... 239 e-105
gb|CA031784.1|CA031784 HX11C02r HX Hordeum vulgare subsp. v... 237 e-104
gb|CA013879.1|CA013879 HT09M01r HT Hordeum vulgare subsp. v... 237 e-104
gb|CV057277.1|CV057277 BNEL26a2 Barley EST endosperm librar... 234 e-103
gb|CV059672.1|CV059672 BNEL4F8 Barley EST endosperm library... 230 e-102
gb|BU978921.1|BU978921 HA14K10r HA Hordeum vulgare subsp. v... 230 e-102
gb|AV934278.1|AV934278 AV934278 K. Sato unpublished cDNA li... 230 e-102
gb|BU978046.1|BU978046 HA12H18r HA Hordeum vulgare subsp. v... 227 e-101
gb|CK123379.1|CK123379 BES1824103m02 BES1824 Hordeum vulgar... 284 e-101
gb|BU982839.1|BU982839 HA27M06r HA Hordeum vulgare subsp. v... 225 e-101
gb|BQ458700.1|BQ458700 HA04H18r HA Hordeum vulgare subsp. v... 225 e-101
gb|AV933195.1|AV933195 AV933195 K. Sato unpublished cDNA li... 225 e-101
gb|BG343542.1|BG343542 HVSMEg0006F12f Hordeum vulgare pre-a... 199 e-100
gb|CV061335.1|CV061335 BNEL67f4 Barley EST endosperm librar... 223 e-100
gb|BQ459597.1|BQ459597 HA08K13r HA Hordeum vulgare subsp. v... 230 e-100
gb|BU989855.1|BU989855 HF22O04r HF Hordeum vulgare subsp. v... 222 e-100
gb|CA019512.1|CA019512 HV12D11r HV Hordeum vulgare subsp. v... 222 e-100
gb|BJ471147.1|BJ471147 BJ471147 K. Sato unpublished cDNA li... 222 e-100
gb|BM370156.2|BM370156 EBro08_SQ003_C16_R root, 3 week, dro... 222 e-100
gb|CK125351.1|CK125351 BES1824107m06 BES1824 Hordeum vulgar... 246 e-100
gb|CK125500.1|CK125500 BES1824108m14 BES1824 Hordeum vulgar... 205 2e-099
gb|BG343847.1|BG343847 HVSMEg0006O16f Hordeum vulgare pre-a... 204 5e-099
gb|BU971281.1|BU971281 HB17C13r BC Hordeum vulgare subsp. v... 360 7e-099
gb|BU976861.1|BU976861 HA10H03r HA Hordeum vulgare subsp. v... 217 1e-098
gb|BJ452177.1|BJ452177 BJ452177 K. Sato unpublished cDNA li... 356 9e-098
gb|CV054364.1|CV054364 BNEL109f7 Barley EST endosperm libra... 214 1e-097
gb|BI778124.2|BI778124 EBro07_SQ002_E18_R root, 3 week, red... 213 2e-097
gb|BU976772.1|BU976772 HA10E16r HA Hordeum vulgare subsp. v... 211 1e-096
gb|BU978459.1|BU978459 HA13E18r HA Hordeum vulgare subsp. v... 211 1e-096
gb|BI778592.2|BI778592 EBro07_SQ003_L22_R root, 3 week, red... 211 1e-096
gb|BU978754.1|BU978754 HA14C20r HA Hordeum vulgare subsp. v... 211 1e-096
gb|BQ471559.1|BQ471559 HV02M17r HV Hordeum vulgare subsp. v... 211 1e-096
gb|BQ470577.1|BQ470577 HX03G08r HX Hordeum vulgare subsp. v... 352 2e-096
gb|CA025841.1|CA025841 HZ53E20r HZ Hordeum vulgare subsp. v... 351 3e-096
gb|BM373292.2|BM373292 EBma04_SQ003_N23_R maternal, 10 DPA,... 350 5e-096
gb|BQ768758.1|BQ768758 EBro08_SQ012_H18_R root, 3 week, dro... 208 7e-096
gb|BU979485.1|BU979485 HA16F02r HA Hordeum vulgare subsp. v... 206 4e-095
gb|CV056528.1|CV056528 BNEL18G7 Barley EST endosperm librar... 211 9e-095
gb|CA018350.1|CA018350 HV08F24r HV Hordeum vulgare subsp. v... 204 2e-094
gb|BI778501.2|BI778501 EBro07_SQ003_H16_R root, 3 week, red... 204 2e-094
gb|BQ767131.1|BQ767131 EBro08_SQ008_F02_R root, 3 week, dro... 204 2e-094
gb|BU979856.1|BU979856 HA17I22r HA Hordeum vulgare subsp. v... 343 9e-094
gb|BI954832.1|BI954832 HVSMEm0019P18f Hordeum vulgare green... 223 1e-093
gb|CV058568.1|CV058568 BNEL39d6 Barley EST endosperm librar... 200 2e-093
gb|CV062378.1|CV062378 BNEL79d12 Barley EST endosperm libra... 199 3e-093
gb|AV933307.1|AV933307 AV933307 K. Sato unpublished cDNA li... 199 6e-093
gb|CA032965.1|CA032965 HX14L13r HX Hordeum vulgare subsp. v... 197 2e-092
gb|BU983328.1|BU983328 HA29F18r HA Hordeum vulgare subsp. v... 197 2e-092
gb|CV057808.1|CV057808 BNEL31a8 Barley EST endosperm librar... 196 4e-092
gb|CV060336.1|CV060336 BNEL57a3 Barley EST endosperm librar... 194 1e-091
gb|BQ135343.1|BQ135343 LP10074 Lemma/palea-enriched cDNA li... 248 2e-091
gb|CV063934.1|CV063934 BNEL94h10 Barley EST endosperm libra... 248 2e-090
gb|AV936754.1|AV936754 AV936754 K. Sato unpublished cDNA li... 246 8e-090
gb|BM371894.2|BM371894 EBma08_SQ004_F19_R maternal, 28 DPA,... 188 8e-090
gb|AV918900.1|AV918900 AV918900 K. Sato unpublished cDNA li... 314 2e-089
gb|BQ464242.1|BQ464242 HF01L18T HF Hordeum vulgare subsp. v... 248 3e-089
gb|AV935799.1|AV935799 AV935799 K. Sato unpublished cDNA li... 248 4e-088
gb|AV936534.1|AV936534 AV936534 K. Sato unpublished cDNA li... 248 4e-088
gb|BJ473776.1|BJ473776 BJ473776 K. Sato unpublished cDNA li... 248 4e-088
gb|BF258436.2|BF258436 HVSMEf0015L13f Hordeum vulgare seedl... 193 4e-088
gb|AV933357.1|AV933357 AV933357 K. Sato unpublished cDNA li... 165 4e-088
gb|BG416306.1|BG416306 HVSMEk0011C24f Hordeum vulgare testa... 311 1e-087
gb|BQ469398.1|BQ469398 HM04H19r HM Hordeum vulgare subsp. v... 322 1e-087
gb|BG344234.2|BG344234 HVSMEg0008E12f Hordeum vulgare pre-a... 162 2e-087
gb|BM097568.2|BM097568 EBem04_SQ002_B04_R embryo, 12 DPA, n... 321 3e-087
gb|BM377349.2|BM377349 EBem05_SQ004_N19_R embryo, 14 DPA, n... 201 3e-087
gb|CA001574.1|CA001574 HS17F10u HS Hordeum vulgare subsp. v... 248 6e-087
gb|BM375743.2|BM375743 EBem06_SQ004_E15_R embryo, 21 DPA, n... 193 1e-086
gb|BQ764834.1|BQ764834 EBca01_SQ005_D06_R carpel, pre-anthe... 159 1e-086
gb|AJ436336.1|AJ436336 AJ436336 S00002 Hordeum vulgare subs... 248 2e-085
gb|CA017379.1|CA017379 HV05A14r HV Hordeum vulgare subsp. v... 312 2e-084
gb|BU989701.1|BU989701 HF22H09r HF Hordeum vulgare subsp. v... 169 3e-084
gb|BF253836.2|BF253836 HVSMEf0002E04f Hordeum vulgare seedl... 310 5e-084
gb|BU982329.1|BU982329 HA26D05r HA Hordeum vulgare subsp. v... 167 1e-083
gb|CV058392.1|CV058392 BNEL37e7 Barley EST endosperm librar... 167 1e-083
gb|BU989804.1|BU989804 HF22L23r HF Hordeum vulgare subsp. v... 167 1e-083
gb|CV054026.1|CV054026 BNEL105h7 Barley EST endosperm libra... 248 2e-083
gb|AV935750.1|AV935750 AV935750 K. Sato unpublished cDNA li... 248 4e-082
gb|BJ459730.1|BJ459730 BJ459730 K. Sato unpublished cDNA li... 304 5e-082
gb|BQ460477.1|BQ460477 HA09H03r HA Hordeum vulgare subsp. v... 162 7e-082
gb|CA025110.1|CA025110 HZ51D20r HZ Hordeum vulgare subsp. v... 162 2e-081
gb|CA025033.1|CA025033 HZ51A13r HZ Hordeum vulgare subsp. v... 162 2e-081
gb|BU995863.1|BU995863 HM11J20r HM Hordeum vulgare subsp. v... 162 2e-081
gb|CB874518.1|CB874518 HX05I04w HX Hordeum vulgare subsp. v... 299 1e-080
gb|AW983358.3|AW983358 HVSMEg0010F13f Hordeum vulgare pre-a... 248 2e-079
gb|BJ462463.1|BJ462463 BJ462463 K. Sato unpublished cDNA li... 248 2e-079
gb|BU967494.1|BU967494 HB04H05r BC Hordeum vulgare subsp. v... 217 4e-079
gb|CV060273.1|CV060273 BNEL56d1 Barley EST endosperm librar... 291 5e-078
gb|BF254234.3|BF254234 HVSMEf0003G09f Hordeum vulgare seedl... 161 1e-077
gb|BU994700.1|BU994700 HM07O12r HM Hordeum vulgare subsp. v... 288 3e-077
gb|CB880234.1|CB880234 HM05O12w HM Hordeum vulgare subsp. v... 288 3e-077
gb|BM099421.2|BM099421 EBes01_SQ003_D07_R embryo sac, 4-6 D... 162 6e-077
gb|AV932300.1|AV932300 AV932300 K. Sato unpublished cDNA li... 162 3e-076
gb|BI779913.2|BI779913 EBem07_SQ001_J03_R embryo, 28 DPA, n... 162 3e-076
gb|BQ765813.1|BQ765813 EBro03_SQ008_B09_R root, 3 week, wat... 282 1e-075
gb|BJ447244.1|BJ447244 BJ447244 K. Sato unpublished cDNA li... 199 2e-075
gb|BU979192.1|BU979192 HA15G17r HA Hordeum vulgare subsp. v... 162 2e-075
gb|BQ472232.1|BQ472232 HV04M15r HV Hordeum vulgare subsp. v... 281 3e-075
gb|CV058518.1|CV058518 BNEL38h3 Barley EST endosperm librar... 165 7e-075
gb|CV058145.1|CV058145 BNEL34g9 Barley EST endosperm librar... 255 2e-074
gb|BJ462156.1|BJ462156 BJ462156 K. Sato unpublished cDNA li... 248 9e-074
gb|BQ665241.1|BQ665241 HX02L09u HX Hordeum vulgare subsp. v... 275 2e-073
gb|BQ665390.1|BQ665390 HX03G08u HX Hordeum vulgare subsp. v... 275 2e-073
gb|CB876406.1|CB876406 HX11C24w HX Hordeum vulgare subsp. v... 275 2e-073
gb|CV054900.1|CV054900 BNEL114e7 Barley EST endosperm libra... 273 8e-073
gb|CV055276.1|CV055276 BNEL118g4 Barley EST endosperm libra... 273 8e-073
gb|CV059910.1|CV059910 BNEL52c4 Barley EST endosperm librar... 273 8e-073
gb|CA012061.1|CA012061 HT04F08r HT Hordeum vulgare subsp. v... 162 2e-072
gb|BQ657044.1|BQ657044 HA09O18u HA Hordeum vulgare subsp. v... 271 4e-072
gb|AJ463558.1|AJ463558 AJ463558 S00002 Hordeum vulgare subs... 165 1e-071
gb|CA017700.1|CA017700 HV05P11r HV Hordeum vulgare subsp. v... 161 1e-070
gb|BQ657440.1|BQ657440 HA08G03u HA Hordeum vulgare subsp. v... 265 2e-070
gb|AV932301.1|AV932301 AV932301 K. Sato unpublished cDNA li... 162 6e-070
gb|CA023743.1|CA023743 HZ47E12r HZ Hordeum vulgare subsp. v... 162 6e-070
gb|BU971081.1|BU971081 HB16I21r BC Hordeum vulgare subsp. v... 261 4e-069
gb|CV058582.1|CV058582 BNEL39e8 Barley EST endosperm librar... 260 8e-069
gb|BF256931.2|BF256931 HVSMEf0011G13f Hordeum vulgare seedl... 256 1e-067
gb|CV055991.1|CV055991 BNEL12G10 Barley EST endosperm libra... 254 5e-067
gb|BI948222.1|BI948222 HVSMEl0008K16f Hordeum vulgare spike... 163 2e-066
gb|BQ763126.1|BQ763126 EBro02_SQ007_E11_R root, 3 week, hyd... 162 1e-065
gb|BM369445.2|BM369445 EBem07_SQ003_J16_R embryo, 28 DPA, n... 248 2e-065
gb|AV935143.1|AV935143 AV935143 K. Sato unpublished cDNA li... 248 4e-065
gb|AV935144.1|AV935144 AV935144 K. Sato unpublished cDNA li... 248 4e-065
gb|AV935645.1|AV935645 AV935645 K. Sato unpublished cDNA li... 248 4e-065
gb|AJ463448.1|AJ463448 AJ463448 S00002 Hordeum vulgare subs... 248 4e-065
gb|AJ463449.1|AJ463449 AJ463449 S00002 Hordeum vulgare subs... 248 4e-065
gb|AJ463450.1|AJ463450 AJ463450 S00002 Hordeum vulgare subs... 248 4e-065
gb|BQ762867.1|BQ762867 EBro02_SQ006_I10_R root, 3 week, hyd... 248 4e-065
gb|BQ765363.1|BQ765363 EBro03_SQ006_O23_R root, 3 week, wat... 248 4e-065
gb|BU976773.1|BU976773 HA10E16u HA Hordeum vulgare subsp. v... 248 4e-065
gb|BU990491.1|BU990491 HF25D09r HF Hordeum vulgare subsp. v... 248 4e-065
gb|CA000812.1|CA000812 HS06N09u HS Hordeum vulgare subsp. v... 248 4e-065
gb|CA016531.1|CA016531 HV08F24u HV Hordeum vulgare subsp. v... 248 4e-065
gb|CA026526.1|CA026526 HZ56C18r HZ Hordeum vulgare subsp. v... 248 4e-065
gb|CA026545.1|CA026545 HZ56D14r HZ Hordeum vulgare subsp. v... 248 4e-065
gb|CB875696.1|CB875696 HX09B09w HX Hordeum vulgare subsp. v... 248 4e-065
gb|CB876387.1|CB876387 HX11C02w HX Hordeum vulgare subsp. v... 248 4e-065
gb|CA003637.1|CA003637 HS15B16r HS Hordeum vulgare subsp. v... 246 1e-064
gb|BM368095.2|BM368095 EBed01_SQ002_C16_R endosperm, 6 DPA,... 246 2e-064
gb|BG416508.1|BG416508 HVSMEk0012K12f Hordeum vulgare testa... 242 3e-063
gb|BM442927.2|BM442927 EBro02_SQ001_O04_R root, 3 week, hyd... 162 3e-063
gb|CV059589.1|CV059589 BNEL49g5 Barley EST endosperm librar... 241 5e-063
gb|CV061700.1|CV061700 BNEL70h5 Barley EST endosperm librar... 240 1e-062
gb|CD663736.1|CD663736 UCRHV18_06bh08_b1 Drought-stressed D... 239 1e-062
gb|CV062733.1|CV062733 BNEL82d12 Barley EST endosperm libra... 160 2e-062
gb|CV058463.1|CV058463 BNEL38c8 Barley EST endosperm librar... 239 2e-062
gb|BM097891.2|BM097891 EBpi03_SQ001_P07_R pistil, 4 DPA, no... 237 6e-062
gb|CB859432.1|CB859432 HI10G24w HI Hordeum vulgare subsp. v... 237 9e-062
gb|BQ756195.1|BQ756195 EBem05_SQ004_B21_R embryo, 14 DPA, n... 135 1e-061
gb|CV057539.1|CV057539 BNEL29a12 Barley EST endosperm libra... 235 2e-061
gb|AJ463451.1|AJ463451 AJ463451 S00002 Hordeum vulgare subs... 220 4e-061
gb|BQ766559.1|BQ766559 EBro08_SQ006_N12_R root, 3 week, dro... 167 4e-061
gb|BQ656443.1|BQ656443 HA04H18u HA Hordeum vulgare subsp. v... 230 8e-060
gb|BQ658065.1|BQ658065 HA05O07u HA Hordeum vulgare subsp. v... 230 8e-060
gb|BU979960.1|BU979960 HA17P09r HA Hordeum vulgare subsp. v... 162 1e-059
gb|BQ664305.1|BQ664305 HV02M17u HV Hordeum vulgare subsp. v... 227 5e-059
gb|CB882016.1|CB882016 HM11J20w HM Hordeum vulgare subsp. v... 227 5e-059
gb|AL510360.1|AL510360 AL510360 Hordeum vulgare Barke devel... 225 2e-058
gb|CA020678.1|CA020678 HZ37C14r HZ Hordeum vulgare subsp. v... 225 2e-058
gb|CV060168.1|CV060168 BNEL55b7 Barley EST endosperm librar... 225 2e-058
gb|BG414786.2|BG414786 HVSMEk0003L13f Hordeum vulgare testa... 225 3e-058
gb|CA028864.1|CA028864 HZ63H13r HZ Hordeum vulgare subsp. v... 224 6e-058
gb|AJ460241.1|AJ460241 AJ460241 S00002 Hordeum vulgare subs... 122 1e-057
gb|BU977346.1|BU977346 HA11E06u HA Hordeum vulgare subsp. v... 222 2e-057
gb|CV056807.1|CV056807 BNEL20g8 Barley EST endosperm librar... 222 2e-057
gb|BQ765744.1|BQ765744 EBro03_SQ008_E04_R root, 3 week, wat... 215 9e-057
gb|CA002209.1|CA002209 HS06N09r HS Hordeum vulgare subsp. v... 162 4e-056
gb|CA022550.1|CA022550 HZ43J15r HZ Hordeum vulgare subsp. v... 162 2e-055
gb|AJ461834.1|AJ461834 AJ461834 S00002 Hordeum vulgare subs... 210 1e-053
gb|BQ664765.1|BQ664765 HV04M15u HV Hordeum vulgare subsp. v... 207 8e-053
gb|AV933035.1|AV933035 AV933035 K. Sato unpublished cDNA li... 205 2e-052
gb|CB874394.1|CB874394 HX05C06w HX Hordeum vulgare subsp. v... 205 3e-052
gb|CV059713.1|CV059713 BNEL50b3 Barley EST endosperm librar... 205 3e-052
gb|AJ463452.1|AJ463452 AJ463452 S00002 Hordeum vulgare subs... 203 1e-051
gb|BJ454745.1|BJ454745 BJ454745 K. Sato unpublished cDNA li... 199 1e-051
gb|BG299572.1|BG299572 HVSMEa0020N06f Hordeum vulgare seedl... 118 5e-050
gb|BQ661641.1|BQ661641 HM04H19u HM Hordeum vulgare subsp. v... 193 8e-049
gb|BU980097.1|BU980097 HA18J04r HA Hordeum vulgare subsp. v... 193 1e-048
gb|CV058711.1|CV058711 BNEL40a3 Barley EST endosperm librar... 191 4e-048
gb|BQ657155.1|BQ657155 HA09H03u HA Hordeum vulgare subsp. v... 191 5e-048
gb|AL505846.1|AL505846 AL505846 Hordeum vulgare Barke roots... 187 1e-046
gb|AJ434208.1|AJ434208 AJ434208 S00002 Hordeum vulgare subs... 185 2e-046
gb|AJ463447.1|AJ463447 AJ463447 S00002 Hordeum vulgare subs... 165 3e-046
gb|BG417915.1|BG417915 HVSMEk0019P10f Hordeum vulgare testa... 184 5e-046
gb|AJ461833.1|AJ461833 AJ461833 S00002 Hordeum vulgare subs... 183 1e-045
gb|BQ665894.1|BQ665894 HZ01H18u HZ Hordeum vulgare subsp. v... 183 1e-045
gb|BU978047.1|BU978047 HA12H18u HA Hordeum vulgare subsp. v... 179 2e-044
gb|AV933201.1|AV933201 AV933201 K. Sato unpublished cDNA li... 152 3e-043
gb|AL509400.1|AL509400 AL509400 Hordeum vulgare Barke devel... 134 1e-042
gb|BQ763130.1|BQ763130 EBro02_SQ007_F11_R root, 3 week, hyd... 157 1e-042
gb|CA015764.1|CA015764 HV12D11u HV Hordeum vulgare subsp. v... 172 2e-042
gb|CV058133.1|CV058133 BNEL34f8 Barley EST endosperm librar... 168 4e-041
gb|BU987960.1|BU987960 HF16E10r HF Hordeum vulgare subsp. v... 167 6e-041
gb|CA017068.1|CA017068 HV05A14u HV Hordeum vulgare subsp. v... 163 1e-039
gb|BQ767885.1|BQ767885 EBro08_SQ010_I03_R root, 3 week, dro... 110 2e-039
gb|AJ434156.1|AJ434156 AJ434156 S00002 Hordeum vulgare subs... 151 4e-036
gb|BU979767.1|BU979767 HA17D16r HA Hordeum vulgare subsp. v... 151 5e-036
gb|BJ464279.1|BJ464279 BJ464279 K. Sato unpublished cDNA li... 147 7e-035
gb|BU985431.1|BU985431 HF07C23r HF Hordeum vulgare subsp. v... 145 3e-034
gb|BJ449495.1|BJ449495 BJ449495 K. Sato unpublished cDNA li... 142 2e-033
gb|CA026081.1|CA026081 HZ54D02r HZ Hordeum vulgare subsp. v... 141 6e-033
gb|BJ456936.1|BJ456936 BJ456936 K. Sato unpublished cDNA li... 136 2e-031
gb|BQ761390.1|BQ761390 EBro06_SQ001_K04_R root, 3 week, dro... 133 1e-030
gb|BF261159.1|BF261159 HVSMEf0023O15f Hordeum vulgare seedl... 133 2e-030
gb|BM370471.2|BM370471 EBro08_SQ004_F08_R root, 3 week, dro... 93 8e-030
gb|BM369591.2|BM369591 EBem07_SQ004_B02_R embryo, 28 DPA, n... 93 4e-029
gb|CB876592.1|CB876592 HX11M07w HX Hordeum vulgare subsp. v... 127 8e-029
gb|BQ468214.1|BQ468214 HP01G19T HP Hordeum vulgare subsp. v... 89 1e-024
>gb|BF627260.2|BF627260 HVSMEb0004G03f Hordeum vulgare seedling shoot EST library
HVcDNA0002 (Dehydration stress) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEb0004G03f, mRNA sequence
Length = 770
Score = 421 bits (914), Expect = e-117
Identities = 179/207 (86%), Positives = 189/207 (91%)
Frame = +3 / +2
Query: 60 HRTAMGIDLVAGGRNKKTKRTAPKSDDVYLKLLVKLYRFLVRRTKSNFNAVILKRLFMSK 239
HR MGIDLVAGGRNK+TKRTAPKSDDVYLKLLVKLYRFLVRRTKS FNAVILKRLFMSK
Sbjct: 41 HRGTMGIDLVAGGRNKRTKRTAPKSDDVYLKLLVKLYRFLVRRTKSQFNAVILKRLFMSK 220
Query: 240 TNRPPLSMRRLVRFMEGKGDQIAVIVGTVTDDKRISEVPAMKVCALRFTETARARIINAG 419
TNRPPLSMRRLVRFM+GK D+IAVIVGT+TDD+R+ E+PAMKV ALRFTETARARI+NAG
Sbjct: 221 TNRPPLSMRRLVRFMDGKADKIAVIVGTITDDQRVYEIPAMKVAALRFTETARARIVNAG 400
Query: 420 GECLTFDQLALRAPLGQNTVLLRGPKNAREAVRHFGPAPGVPHSHTKPYVRSKGRKFEKA 599
GECLTFDQLALRAPLGQNT+LLRGPKNAREAVRHFG APGVPHSHTKPYVRSKGRKFEKA
Sbjct: 401 GECLTFDQLALRAPLGQNTLLLRGPKNAREAVRHFGKAPGVPHSHTKPYVRSKGRKFEKA 580
Query: 600 RGRRNSRGFKV*VATALPI*CRFARVS 680
RGRRNSRGFKV* CR +S
Sbjct: 581 RGRRNSRGFKV*AVEIWAPSCRILLLS 661
Score = 287 bits (621), Expect = 6e-077
Identities = 135/184 (73%), Positives = 139/184 (75%)
Frame = -1 / -3
Query: 574 ERT*GLVWL*GTPGAGPKCLTASLAFLGPLSRTVFCPSGARSASWSKVRHSPPALMILAL 395
ERT GLVWL GTPGA PKCLTASLAFLGPL R+VFCPSGAR ASWSKVRHSPPAL ILAL
Sbjct: 555 ERTYGLVWLCGTPGALPKCLTASLAFLGPLRRSVFCPSGARRASWSKVRHSPPALTILAL 376
Query: 394 AVSVNLSAQTFIAGTSLILLSSVTVPTITAI*SPFPSMNLTRRRIESGGRLVLLMKRRLR 215
AVSVNLSA TFIAG S L SSV VPTITAI S FPSMNLTRRRIESGGR VLLMK R R
Sbjct: 375 AVSVNLSAATFIAGIS*TLWSSVMVPTITAILSAFPSMNLTRRRIESGGRFVLLMKSRFR 196
Query: 214 ITALKLLFVXXXXXXXXXXXXXXXXXSDLGAVRLVFLLRPPATRSIPMAVRWRLQRRQDG 35
ITAL L V SDLGAVRLV LLRPPATRSIPM RW +Q+R+
Sbjct: 195 ITALNWLLVLRTRKR*SLTSSLRYTSSDLGAVRLVLLLRPPATRSIPMVPRWWMQQRRGS 16
Query: 34 RGAR 23
R R
Sbjct: 15 RRQR 4
Score = 249 bits (539), Expect(2) = 2e-077
Identities = 105/155 (67%), Positives = 124/155 (80%)
Frame = -3 / -2
Query: 635 LDLEAPAVPPSSRLLKLPTLRANIRLGVAVRHSWCRPEVPDSFPSVLRTPQQNRVLPKWG 456
L+LEAPAVPPSS LL+ P L A+I LGVAV HSW +VP+SFP VL TPQ+ RVL K
Sbjct: 616 LNLEAPAVPPSSCLLEFPALGADIWLGVAVWHSWSFAKVPNSFPGVLGTPQEKRVLSKRS 437
Query: 455 TERELVEGEALSASIDDPGPRCLSEPERADLHRRHLADPLVVGHGAHNHGDLITLPLHEP 276
TE ELV+G+AL+ S+D+PGPR L EPER LH R+L DPLV+G GAH+H DL+ LP+HEP
Sbjct: 436 TEGELVKGKALATSVDNPGPRRLGEPERGHLHCRYLVDPLVIGDGAHDHSDLVRLPIHEP 257
Query: 275 DEAAHRERRAVGLAHEEALEDHGVEVALCPAHKEA 171
DEAAHRERR V LAHEE L+DHGVE+AL P H+EA
Sbjct: 256 DEAAHRERRPVCLAHEEPLQDHGVELALGPPHQEA 152
Score = 143 bits (307), Expect(2) = 1e-039
Identities = 64/127 (50%), Positives = 73/127 (57%)
Frame = +2 / +1
Query: 188 DKEQLQRRDPQAPLHEXXXXXXXXXXXXRQVHGGEG*SDRRDCGHRDRRQEDQRGAGDEG 367
D+E +QRRDP+A LHE RQVHG EG DR D GH R E R G+EG
Sbjct: 169 DQEPVQRRDPEAALHEQDKPAAALDAPPRQVHGWEGGQDRCDRGHHHR*PEGLRDTGNEG 348
Query: 368 LRAQVH*DSEGQDHQCWRRVPHLRPARAPCPTWAKHXXXXXXXXXXXXCQALRACTRSAS 547
RAQVH D EGQD Q W RVP+L PAR PC W +H C AL +RSA+
Sbjct: 349 GRAQVHRDGEGQDCQRWWRVPYL*PARPPCSAWTEHASPEGSQERQGSC*ALWQSSRSAT 528
Query: 548 QPHQALC 568
QPHQA+C
Sbjct: 529 QPHQAIC 549
Score = 60.2 bits (125), Expect(2) = 2e-077
Identities = 19/21 (90%), Positives = 19/21 (90%)
Frame = -2 / -1
Query: 132 TWAPCAWSSCCGRRLRDRYPW 70
TWAPCAWSSCCGRR R RYPW
Sbjct: 113 TWAPCAWSSCCGRRRRGRYPW 51
Score = 40.0 bits (81), Expect(2) = 1e-039
Identities = 16/23 (69%), Positives = 16/23 (69%)
Frame = +2 / +1
Query: 71 HGYXXXXXXPQQEDQAHGAQVRR 139
HGY PQQEDQAHGAQV R
Sbjct: 52 HGYRPRRRRPQQEDQAHGAQVGR 120
>gb|BG418403.2|BG418403 HVSMEk0022J07f Hordeum vulgare testa/pericarp EST library
HVcDNA0013 (normal) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEk0022J07f, mRNA sequence
Length = 811
Score = 421 bits (913), Expect = e-117
Identities = 179/207 (86%), Positives = 189/207 (91%)
Frame = +3 / +1
Query: 60 HRTAMGIDLVAGGRNKKTKRTAPKSDDVYLKLLVKLYRFLVRRTKSNFNAVILKRLFMSK 239
HR MGIDLVAGGRNK+TKRTAPKSDDVYLKLLVKLYRFLVRRTKS FNAVILKRLFMSK
Sbjct: 25 HRGTMGIDLVAGGRNKRTKRTAPKSDDVYLKLLVKLYRFLVRRTKSQFNAVILKRLFMSK 204
Query: 240 TNRPPLSMRRLVRFMEGKGDQIAVIVGTVTDDKRISEVPAMKVCALRFTETARARIINAG 419
TNRPPLSMRRLVRFM+GK D+IAVIVGT+TDD+R+ E+PAMKV ALRFTETARARI+NAG
Sbjct: 205 TNRPPLSMRRLVRFMDGKADKIAVIVGTITDDQRVYEIPAMKVAALRFTETARARIVNAG 384
Query: 420 GECLTFDQLALRAPLGQNTVLLRGPKNAREAVRHFGPAPGVPHSHTKPYVRSKGRKFEKA 599
GECLTFDQLALRAPLGQNT+LLRGPKNAREAVRHFG APGVPHSHTKPYVRSKGRKFEKA
Sbjct: 385 GECLTFDQLALRAPLGQNTLLLRGPKNAREAVRHFGKAPGVPHSHTKPYVRSKGRKFEKA 564
Query: 600 RGRRNSRGFKV*VATALPI*CRFARVS 680
RGRRNSRGFKV* CR +S
Sbjct: 565 RGRRNSRGFKV*AVEFWAPSCRILLLS 645
Score = 284 bits (615), Expect = 4e-076
Identities = 133/178 (74%), Positives = 137/178 (76%)
Frame = -1 / -3
Query: 574 ERT*GLVWL*GTPGAGPKCLTASLAFLGPLSRTVFCPSGARSASWSKVRHSPPALMILAL 395
ERT GLVWL GTPGA PKCLTASLAFLGPL R+VFCPSGAR ASWSKVRHSPPAL ILAL
Sbjct: 539 ERTYGLVWLCGTPGALPKCLTASLAFLGPLRRSVFCPSGARRASWSKVRHSPPALTILAL 360
Query: 394 AVSVNLSAQTFIAGTSLILLSSVTVPTITAI*SPFPSMNLTRRRIESGGRLVLLMKRRLR 215
AVSVNLSA TFIAG S L SSV VPTITAI S FPSMNLTRRRIESGGR VLLMK R R
Sbjct: 359 AVSVNLSAATFIAGIS*TLWSSVMVPTITAILSAFPSMNLTRRRIESGGRFVLLMKSRFR 180
Query: 214 ITALKLLFVXXXXXXXXXXXXXXXXXSDLGAVRLVFLLRPPATRSIPMAVRWRLQRRQ 41
ITAL L V SDLGAVRLV LLRPPATRSIPM RW +Q+R+
Sbjct: 179 ITALNWLLVLRTRKR*SLTSSLRYTSSDLGAVRLVLLLRPPATRSIPMVPRWWMQQRR 6
Score = 249 bits (539), Expect(2) = 2e-077
Identities = 105/155 (67%), Positives = 124/155 (80%)
Frame = -3 / -2
Query: 635 LDLEAPAVPPSSRLLKLPTLRANIRLGVAVRHSWCRPEVPDSFPSVLRTPQQNRVLPKWG 456
L+LEAPAVPPSS LL+ P L A+I LGVAV HSW +VP+SFP VL TPQ+ RVL K
Sbjct: 600 LNLEAPAVPPSSCLLEFPALGADIWLGVAVWHSWSFAKVPNSFPGVLGTPQEKRVLSKRS 421
Query: 455 TERELVEGEALSASIDDPGPRCLSEPERADLHRRHLADPLVVGHGAHNHGDLITLPLHEP 276
TE ELV+G+AL+ S+D+PGPR L EPER LH R+L DPLV+G GAH+H DL+ LP+HEP
Sbjct: 420 TEGELVKGKALATSVDNPGPRRLGEPERGHLHCRYLVDPLVIGDGAHDHSDLVRLPIHEP 241
Query: 275 DEAAHRERRAVGLAHEEALEDHGVEVALCPAHKEA 171
DEAAHRERR V LAHEE L+DHGVE+AL P H+EA
Sbjct: 240 DEAAHRERRPVCLAHEEPLQDHGVELALGPPHQEA 136
Score = 143 bits (307), Expect(3) = 1e-040
Identities = 64/127 (50%), Positives = 73/127 (57%)
Frame = +2 / +3
Query: 188 DKEQLQRRDPQAPLHEXXXXXXXXXXXXRQVHGGEG*SDRRDCGHRDRRQEDQRGAGDEG 367
D+E +QRRDP+A LHE RQVHG EG DR D GH R E R G+EG
Sbjct: 153 DQEPVQRRDPEAALHEQDKPAAALDAPPRQVHGWEGGQDRCDRGHHHR*PEGLRDTGNEG 332
Query: 368 LRAQVH*DSEGQDHQCWRRVPHLRPARAPCPTWAKHXXXXXXXXXXXXCQALRACTRSAS 547
RAQVH D EGQD Q W RVP+L PAR PC W +H C AL +RSA+
Sbjct: 333 GRAQVHRDGEGQDCQRWWRVPYL*PARPPCSAWTEHASPEGSQERQGSC*ALWQSSRSAT 512
Query: 548 QPHQALC 568
QPHQA+C
Sbjct: 513 QPHQAIC 533
Score = 60.2 bits (125), Expect(2) = 2e-077
Identities = 19/21 (90%), Positives = 19/21 (90%)
Frame = -2 / -1
Query: 132 TWAPCAWSSCCGRRLRDRYPW 70
TWAPCAWSSCCGRR R RYPW
Sbjct: 97 TWAPCAWSSCCGRRRRGRYPW 35
Score = 40.0 bits (81), Expect(3) = 1e-040
Identities = 16/23 (69%), Positives = 16/23 (69%)
Frame = +2 / +3
Query: 71 HGYXXXXXXPQQEDQAHGAQVRR 139
HGY PQQEDQAHGAQV R
Sbjct: 36 HGYRPRRRRPQQEDQAHGAQVGR 104
Score = 25.4 bits (49), Expect(3) = 1e-040
Identities = 7/24 (29%), Positives = 14/24 (58%)
Frame = +3 / +1
Query: 693 FWCHSCNVLVVGISCHYRISNQSN 764
FW SC +L++ + H+ Q++
Sbjct: 610 FWAPSCRILLLSVYYHHLFGYQNH 681
>gb|BQ460366.1|BQ460366 HA09O18r HA Hordeum vulgare subsp. vulgare cDNA clone HA09O18
5-PRIME, mRNA sequence
Length = 632
Score = 419 bits (910), Expect = e-117
Identities = 176/192 (91%), Positives = 185/192 (96%)
Frame = +3 / +1
Query: 60 HRTAMGIDLVAGGRNKKTKRTAPKSDDVYLKLLVKLYRFLVRRTKSNFNAVILKRLFMSK 239
HR MGIDLVAGGRNK+TKRTAPKSDDVYLKLLVKLYRFLVRRTKS FNAVILKRLFMSK
Sbjct: 55 HRGTMGIDLVAGGRNKRTKRTAPKSDDVYLKLLVKLYRFLVRRTKSQFNAVILKRLFMSK 234
Query: 240 TNRPPLSMRRLVRFMEGKGDQIAVIVGTVTDDKRISEVPAMKVCALRFTETARARIINAG 419
TNRPPLSMRRLVRFM+GK D+IAVIVGT+TDD+R+ E+PAMKV ALRFTETARARI+NAG
Sbjct: 235 TNRPPLSMRRLVRFMDGKADKIAVIVGTITDDQRVYEIPAMKVAALRFTETARARIVNAG 414
Query: 420 GECLTFDQLALRAPLGQNTVLLRGPKNAREAVRHFGPAPGVPHSHTKPYVRSKGRKFEKA 599
GECLTFDQLALRAPLGQNT+LLRGPKNAREAVRHFG APGVPHSHTKPYVRSKGRKFEKA
Sbjct: 415 GECLTFDQLALRAPLGQNTLLLRGPKNAREAVRHFGKAPGVPHSHTKPYVRSKGRKFEKA 594
Query: 600 RGRRNSRGFKV* 635
RGRRNSRGFKV*
Sbjct: 595 RGRRNSRGFKV* 630
Score = 287 bits (621), Expect = 6e-077
Identities = 135/184 (73%), Positives = 139/184 (75%)
Frame = -1 / -1
Query: 574 ERT*GLVWL*GTPGAGPKCLTASLAFLGPLSRTVFCPSGARSASWSKVRHSPPALMILAL 395
ERT GLVWL GTPGA PKCLTASLAFLGPL R+VFCPSGAR ASWSKVRHSPPAL ILAL
Sbjct: 569 ERTYGLVWLCGTPGALPKCLTASLAFLGPLRRSVFCPSGARRASWSKVRHSPPALTILAL 390
Query: 394 AVSVNLSAQTFIAGTSLILLSSVTVPTITAI*SPFPSMNLTRRRIESGGRLVLLMKRRLR 215
AVSVNLSA TFIAG S L SSV VPTITAI S FPSMNLTRRRIESGGR VLLMK R R
Sbjct: 389 AVSVNLSAATFIAGIS*TLWSSVMVPTITAILSAFPSMNLTRRRIESGGRFVLLMKSRFR 210
Query: 214 ITALKLLFVXXXXXXXXXXXXXXXXXSDLGAVRLVFLLRPPATRSIPMAVRWRLQRRQDG 35
ITAL L V SDLGAVRLV LLRPPATRSIPM RW +Q+R+
Sbjct: 209 ITALNWLLVLRTRKR*SLTSSLRYTSSDLGAVRLVLLLRPPATRSIPMVPRWWMQQRRGS 30
Query: 34 RGAR 23
R R
Sbjct: 29 RRQR 18
Score = 249 bits (539), Expect(2) = 2e-077
Identities = 105/155 (67%), Positives = 124/155 (80%)
Frame = -3 / -3
Query: 635 LDLEAPAVPPSSRLLKLPTLRANIRLGVAVRHSWCRPEVPDSFPSVLRTPQQNRVLPKWG 456
L+LEAPAVPPSS LL+ P L A+I LGVAV HSW +VP+SFP VL TPQ+ RVL K
Sbjct: 630 LNLEAPAVPPSSCLLEFPALGADIWLGVAVWHSWSFAKVPNSFPGVLGTPQEKRVLSKRS 451
Query: 455 TERELVEGEALSASIDDPGPRCLSEPERADLHRRHLADPLVVGHGAHNHGDLITLPLHEP 276
TE ELV+G+AL+ S+D+PGPR L EPER LH R+L DPLV+G GAH+H DL+ LP+HEP
Sbjct: 450 TEGELVKGKALATSVDNPGPRRLGEPERGHLHCRYLVDPLVIGDGAHDHSDLVRLPIHEP 271
Query: 275 DEAAHRERRAVGLAHEEALEDHGVEVALCPAHKEA 171
DEAAHRERR V LAHEE L+DHGVE+AL P H+EA
Sbjct: 270 DEAAHRERRPVCLAHEEPLQDHGVELALGPPHQEA 166
Score = 143 bits (307), Expect(2) = 1e-039
Identities = 64/127 (50%), Positives = 73/127 (57%)
Frame = +2 / +3
Query: 188 DKEQLQRRDPQAPLHEXXXXXXXXXXXXRQVHGGEG*SDRRDCGHRDRRQEDQRGAGDEG 367
D+E +QRRDP+A LHE RQVHG EG DR D GH R E R G+EG
Sbjct: 183 DQEPVQRRDPEAALHEQDKPAAALDAPPRQVHGWEGGQDRCDRGHHHR*PEGLRDTGNEG 362
Query: 368 LRAQVH*DSEGQDHQCWRRVPHLRPARAPCPTWAKHXXXXXXXXXXXXCQALRACTRSAS 547
RAQVH D EGQD Q W RVP+L PAR PC W +H C AL +RSA+
Sbjct: 363 GRAQVHRDGEGQDCQRWWRVPYL*PARPPCSAWTEHASPEGSQERQGSC*ALWQSSRSAT 542
Query: 548 QPHQALC 568
QPHQA+C
Sbjct: 543 QPHQAIC 563
Score = 60.2 bits (125), Expect(2) = 2e-077
Identities = 19/21 (90%), Positives = 19/21 (90%)
Frame = -2 / -2
Query: 132 TWAPCAWSSCCGRRLRDRYPW 70
TWAPCAWSSCCGRR R RYPW
Sbjct: 127 TWAPCAWSSCCGRRRRGRYPW 65
Score = 40.0 bits (81), Expect(2) = 1e-039
Identities = 16/23 (69%), Positives = 16/23 (69%)
Frame = +2 / +3
Query: 71 HGYXXXXXXPQQEDQAHGAQVRR 139
HGY PQQEDQAHGAQV R
Sbjct: 66 HGYRPRRRRPQQEDQAHGAQVGR 134
>gb|BU977345.1|BU977345 HA11E06r HA Hordeum vulgare subsp. vulgare cDNA clone HA11E06
5-PRIME, mRNA sequence
Length = 617
Score = 419 bits (910), Expect = e-117
Identities = 176/192 (91%), Positives = 185/192 (96%)
Frame = +3 / +1
Query: 60 HRTAMGIDLVAGGRNKKTKRTAPKSDDVYLKLLVKLYRFLVRRTKSNFNAVILKRLFMSK 239
HR MGIDLVAGGRNK+TKRTAPKSDDVYLKLLVKLYRFLVRRTKS FNAVILKRLFMSK
Sbjct: 22 HRGTMGIDLVAGGRNKRTKRTAPKSDDVYLKLLVKLYRFLVRRTKSQFNAVILKRLFMSK 201
Query: 240 TNRPPLSMRRLVRFMEGKGDQIAVIVGTVTDDKRISEVPAMKVCALRFTETARARIINAG 419
TNRPPLSMRRLVRFM+GK D+IAVIVGT+TDD+R+ E+PAMKV ALRFTETARARI+NAG
Sbjct: 202 TNRPPLSMRRLVRFMDGKADKIAVIVGTITDDQRVYEIPAMKVAALRFTETARARIVNAG 381
Query: 420 GECLTFDQLALRAPLGQNTVLLRGPKNAREAVRHFGPAPGVPHSHTKPYVRSKGRKFEKA 599
GECLTFDQLALRAPLGQNT+LLRGPKNAREAVRHFG APGVPHSHTKPYVRSKGRKFEKA
Sbjct: 382 GECLTFDQLALRAPLGQNTLLLRGPKNAREAVRHFGKAPGVPHSHTKPYVRSKGRKFEKA 561
Query: 600 RGRRNSRGFKV* 635
RGRRNSRGFKV*
Sbjct: 562 RGRRNSRGFKV* 597
Score = 281 bits (608), Expect = 4e-075
Identities = 132/175 (75%), Positives = 134/175 (76%)
Frame = -1 / -1
Query: 574 ERT*GLVWL*GTPGAGPKCLTASLAFLGPLSRTVFCPSGARSASWSKVRHSPPALMILAL 395
ERT GLVWL GTPGA PKCLTASLAFLGPL R+VFCPSGAR ASWSKVRHSPPAL ILAL
Sbjct: 536 ERTYGLVWLCGTPGALPKCLTASLAFLGPLRRSVFCPSGARRASWSKVRHSPPALTILAL 357
Query: 394 AVSVNLSAQTFIAGTSLILLSSVTVPTITAI*SPFPSMNLTRRRIESGGRLVLLMKRRLR 215
AVSVNLSA TFIAG S L SSV VPTITAI S FPSMNLTRRRIESGGR VLLMK R R
Sbjct: 356 AVSVNLSAATFIAGIS*TLWSSVMVPTITAILSAFPSMNLTRRRIESGGRFVLLMKSRFR 177
Query: 214 ITALKLLFVXXXXXXXXXXXXXXXXXSDLGAVRLVFLLRPPATRSIPMAVRWRLQ 50
ITAL L V SDLGAVRLV LLRPPATRSIPM RW +Q
Sbjct: 176 ITALNWLLVLRTRKR*SLTSSLRYTSSDLGAVRLVLLLRPPATRSIPMVPRWWMQ 12
Score = 249 bits (539), Expect(2) = 2e-077
Identities = 105/155 (67%), Positives = 124/155 (80%)
Frame = -3 / -3
Query: 635 LDLEAPAVPPSSRLLKLPTLRANIRLGVAVRHSWCRPEVPDSFPSVLRTPQQNRVLPKWG 456
L+LEAPAVPPSS LL+ P L A+I LGVAV HSW +VP+SFP VL TPQ+ RVL K
Sbjct: 597 LNLEAPAVPPSSCLLEFPALGADIWLGVAVWHSWSFAKVPNSFPGVLGTPQEKRVLSKRS 418
Query: 455 TERELVEGEALSASIDDPGPRCLSEPERADLHRRHLADPLVVGHGAHNHGDLITLPLHEP 276
TE ELV+G+AL+ S+D+PGPR L EPER LH R+L DPLV+G GAH+H DL+ LP+HEP
Sbjct: 417 TEGELVKGKALATSVDNPGPRRLGEPERGHLHCRYLVDPLVIGDGAHDHSDLVRLPIHEP 238
Query: 275 DEAAHRERRAVGLAHEEALEDHGVEVALCPAHKEA 171
DEAAHRERR V LAHEE L+DHGVE+AL P H+EA
Sbjct: 237 DEAAHRERRPVCLAHEEPLQDHGVELALGPPHQEA 133
Score = 143 bits (307), Expect(2) = 1e-039
Identities = 64/127 (50%), Positives = 73/127 (57%)
Frame = +2 / +3
Query: 188 DKEQLQRRDPQAPLHEXXXXXXXXXXXXRQVHGGEG*SDRRDCGHRDRRQEDQRGAGDEG 367
D+E +QRRDP+A LHE RQVHG EG DR D GH R E R G+EG
Sbjct: 150 DQEPVQRRDPEAALHEQDKPAAALDAPPRQVHGWEGGQDRCDRGHHHR*PEGLRDTGNEG 329
Query: 368 LRAQVH*DSEGQDHQCWRRVPHLRPARAPCPTWAKHXXXXXXXXXXXXCQALRACTRSAS 547
RAQVH D EGQD Q W RVP+L PAR PC W +H C AL +RSA+
Sbjct: 330 GRAQVHRDGEGQDCQRWWRVPYL*PARPPCSAWTEHASPEGSQERQGSC*ALWQSSRSAT 509
Query: 548 QPHQALC 568
QPHQA+C
Sbjct: 510 QPHQAIC 530
Score = 60.2 bits (125), Expect(2) = 2e-077
Identities = 19/21 (90%), Positives = 19/21 (90%)
Frame = -2 / -2
Query: 132 TWAPCAWSSCCGRRLRDRYPW 70
TWAPCAWSSCCGRR R RYPW
Sbjct: 94 TWAPCAWSSCCGRRRRGRYPW 32
Score = 40.0 bits (81), Expect(2) = 1e-039
Identities = 16/23 (69%), Positives = 16/23 (69%)
Frame = +2 / +3
Query: 71 HGYXXXXXXPQQEDQAHGAQVRR 139
HGY PQQEDQAHGAQV R
Sbjct: 33 HGYRPRRRRPQQEDQAHGAQVGR 101
>gb|CA009098.1|CA009098 HU13C18r HU Hordeum vulgare subsp. vulgare cDNA clone HU13C18
5-PRIME, mRNA sequence
Length = 600
Score = 419 bits (910), Expect = e-117
Identities = 176/192 (91%), Positives = 185/192 (96%)
Frame = +3 / +3
Query: 60 HRTAMGIDLVAGGRNKKTKRTAPKSDDVYLKLLVKLYRFLVRRTKSNFNAVILKRLFMSK 239
HR MGIDLVAGGRNK+TKRTAPKSDDVYLKLLVKLYRFLVRRTKS FNAVILKRLFMSK
Sbjct: 15 HRGTMGIDLVAGGRNKRTKRTAPKSDDVYLKLLVKLYRFLVRRTKSQFNAVILKRLFMSK 194
Query: 240 TNRPPLSMRRLVRFMEGKGDQIAVIVGTVTDDKRISEVPAMKVCALRFTETARARIINAG 419
TNRPPLSMRRLVRFM+GK D+IAVIVGT+TDD+R+ E+PAMKV ALRFTETARARI+NAG
Sbjct: 195 TNRPPLSMRRLVRFMDGKADKIAVIVGTITDDQRVYEIPAMKVAALRFTETARARIVNAG 374
Query: 420 GECLTFDQLALRAPLGQNTVLLRGPKNAREAVRHFGPAPGVPHSHTKPYVRSKGRKFEKA 599
GECLTFDQLALRAPLGQNT+LLRGPKNAREAVRHFG APGVPHSHTKPYVRSKGRKFEKA
Sbjct: 375 GECLTFDQLALRAPLGQNTLLLRGPKNAREAVRHFGKAPGVPHSHTKPYVRSKGRKFEKA 554
Query: 600 RGRRNSRGFKV* 635
RGRRNSRGFKV*
Sbjct: 555 RGRRNSRGFKV* 590
Score = 281 bits (609), Expect = 3e-075
Identities = 132/176 (75%), Positives = 135/176 (76%)
Frame = -1 / -3
Query: 574 ERT*GLVWL*GTPGAGPKCLTASLAFLGPLSRTVFCPSGARSASWSKVRHSPPALMILAL 395
ERT GLVWL GTPGA PKCLTASLAFLGPL R+VFCPSGAR ASWSKVRHSPPAL ILAL
Sbjct: 529 ERTYGLVWLCGTPGALPKCLTASLAFLGPLRRSVFCPSGARRASWSKVRHSPPALTILAL 350
Query: 394 AVSVNLSAQTFIAGTSLILLSSVTVPTITAI*SPFPSMNLTRRRIESGGRLVLLMKRRLR 215
AVSVNLSA TFIAG S L SSV VPTITAI S FPSMNLTRRRIESGGR VLLMK R R
Sbjct: 349 AVSVNLSAATFIAGIS*TLWSSVMVPTITAILSAFPSMNLTRRRIESGGRFVLLMKSRFR 170
Query: 214 ITALKLLFVXXXXXXXXXXXXXXXXXSDLGAVRLVFLLRPPATRSIPMAVRWRLQR 47
ITAL L V SDLGAVRLV LLRPPATRSIPM RW +Q+
Sbjct: 169 ITALNWLLVLRTRKR*SLTSSLRYTSSDLGAVRLVLLLRPPATRSIPMVPRWWMQQ 2
Score = 249 bits (539), Expect(2) = 2e-077
Identities = 105/155 (67%), Positives = 124/155 (80%)
Frame = -3 / -2
Query: 635 LDLEAPAVPPSSRLLKLPTLRANIRLGVAVRHSWCRPEVPDSFPSVLRTPQQNRVLPKWG 456
L+LEAPAVPPSS LL+ P L A+I LGVAV HSW +VP+SFP VL TPQ+ RVL K
Sbjct: 590 LNLEAPAVPPSSCLLEFPALGADIWLGVAVWHSWSFAKVPNSFPGVLGTPQEKRVLSKRS 411
Query: 455 TERELVEGEALSASIDDPGPRCLSEPERADLHRRHLADPLVVGHGAHNHGDLITLPLHEP 276
TE ELV+G+AL+ S+D+PGPR L EPER LH R+L DPLV+G GAH+H DL+ LP+HEP
Sbjct: 410 TEGELVKGKALATSVDNPGPRRLGEPERGHLHCRYLVDPLVIGDGAHDHSDLVRLPIHEP 231
Query: 275 DEAAHRERRAVGLAHEEALEDHGVEVALCPAHKEA 171
DEAAHRERR V LAHEE L+DHGVE+AL P H+EA
Sbjct: 230 DEAAHRERRPVCLAHEEPLQDHGVELALGPPHQEA 126
Score = 143 bits (307), Expect(2) = 1e-039
Identities = 64/127 (50%), Positives = 73/127 (57%)
Frame = +2 / +2
Query: 188 DKEQLQRRDPQAPLHEXXXXXXXXXXXXRQVHGGEG*SDRRDCGHRDRRQEDQRGAGDEG 367
D+E +QRRDP+A LHE RQVHG EG DR D GH R E R G+EG
Sbjct: 143 DQEPVQRRDPEAALHEQDKPAAALDAPPRQVHGWEGGQDRCDRGHHHR*PEGLRDTGNEG 322
Query: 368 LRAQVH*DSEGQDHQCWRRVPHLRPARAPCPTWAKHXXXXXXXXXXXXCQALRACTRSAS 547
RAQVH D EGQD Q W RVP+L PAR PC W +H C AL +RSA+
Sbjct: 323 GRAQVHRDGEGQDCQRWWRVPYL*PARPPCSAWTEHASPEGSQERQGSC*ALWQSSRSAT 502
Query: 548 QPHQALC 568
QPHQA+C
Sbjct: 503 QPHQAIC 523
Score = 60.2 bits (125), Expect(2) = 2e-077
Identities = 19/21 (90%), Positives = 19/21 (90%)
Frame = -2 / -1
Query: 132 TWAPCAWSSCCGRRLRDRYPW 70
TWAPCAWSSCCGRR R RYPW
Sbjct: 87 TWAPCAWSSCCGRRRRGRYPW 25
Score = 40.0 bits (81), Expect(2) = 1e-039
Identities = 16/23 (69%), Positives = 16/23 (69%)
Frame = +2 / +2
Query: 71 HGYXXXXXXPQQEDQAHGAQVRR 139
HGY PQQEDQAHGAQV R
Sbjct: 26 HGYRPRRRRPQQEDQAHGAQVGR 94
>gb|BU998242.1|BU998242 HI10G24r HI Hordeum vulgare subsp. vulgare cDNA clone HI10G24
5-PRIME, mRNA sequence
Length = 638
Score = 413 bits (896), Expect = e-115
Identities = 173/188 (92%), Positives = 183/188 (97%)
Frame = +3 / +1
Query: 72 MGIDLVAGGRNKKTKRTAPKSDDVYLKLLVKLYRFLVRRTKSNFNAVILKRLFMSKTNRP 251
+GIDLVAGGRNK+TKRTAPKSDDVYLKLLVKLYRFLVRRTKS FNAVILKRLFMSKTNRP
Sbjct: 46 LGIDLVAGGRNKRTKRTAPKSDDVYLKLLVKLYRFLVRRTKSQFNAVILKRLFMSKTNRP 225
Query: 252 PLSMRRLVRFMEGKGDQIAVIVGTVTDDKRISEVPAMKVCALRFTETARARIINAGGECL 431
PLSMRRLVRFM+GK D+IAVIVGT+TDD+R+ E+PAMKV ALRFTETARARI+NAGGECL
Sbjct: 226 PLSMRRLVRFMDGKADKIAVIVGTITDDQRVYEIPAMKVAALRFTETARARIVNAGGECL 405
Query: 432 TFDQLALRAPLGQNTVLLRGPKNAREAVRHFGPAPGVPHSHTKPYVRSKGRKFEKARGRR 611
TFDQLALRAPLGQNT+LLRGPKNAREAVRHFG APGVPHSHTKPYVRSKGRKFEKARGRR
Sbjct: 406 TFDQLALRAPLGQNTLLLRGPKNAREAVRHFGKAPGVPHSHTKPYVRSKGRKFEKARGRR 585
Query: 612 NSRGFKV* 635
NSRGFKV*
Sbjct: 586 NSRGFKV* 609
Score = 270 bits (585), Expect = 5e-072
Identities = 128/167 (76%), Positives = 129/167 (77%)
Frame = -1 / -1
Query: 574 ERT*GLVWL*GTPGAGPKCLTASLAFLGPLSRTVFCPSGARSASWSKVRHSPPALMILAL 395
ERT GLVWL GTPGA PKCLTASLAFLGPL R+VFCPSGAR ASWSKVRHSPPAL ILAL
Sbjct: 548 ERTYGLVWLCGTPGALPKCLTASLAFLGPLRRSVFCPSGARRASWSKVRHSPPALTILAL 369
Query: 394 AVSVNLSAQTFIAGTSLILLSSVTVPTITAI*SPFPSMNLTRRRIESGGRLVLLMKRRLR 215
AVSVNLSA TFIAG S L SSV VPTITAI S FPSMNLTRRRIESGGR VLLMK R R
Sbjct: 368 AVSVNLSAATFIAGIS*TLWSSVMVPTITAILSAFPSMNLTRRRIESGGRFVLLMKSRFR 189
Query: 214 ITALKLLFVXXXXXXXXXXXXXXXXXSDLGAVRLVFLLRPPATRSIP 74
ITAL L V SDLGAVRLV LLRPPATRSIP
Sbjct: 188 ITALNWLLVLRTRKR*SLTSSLRYTSSDLGAVRLVLLLRPPATRSIP 48
Score = 249 bits (539), Expect(2) = 6e-076
Identities = 105/155 (67%), Positives = 124/155 (80%)
Frame = -3 / -3
Query: 635 LDLEAPAVPPSSRLLKLPTLRANIRLGVAVRHSWCRPEVPDSFPSVLRTPQQNRVLPKWG 456
L+LEAPAVPPSS LL+ P L A+I LGVAV HSW +VP+SFP VL TPQ+ RVL K
Sbjct: 609 LNLEAPAVPPSSCLLEFPALGADIWLGVAVWHSWSFAKVPNSFPGVLGTPQEKRVLSKRS 430
Query: 455 TERELVEGEALSASIDDPGPRCLSEPERADLHRRHLADPLVVGHGAHNHGDLITLPLHEP 276
TE ELV+G+AL+ S+D+PGPR L EPER LH R+L DPLV+G GAH+H DL+ LP+HEP
Sbjct: 429 TEGELVKGKALATSVDNPGPRRLGEPERGHLHCRYLVDPLVIGDGAHDHSDLVRLPIHEP 250
Query: 275 DEAAHRERRAVGLAHEEALEDHGVEVALCPAHKEA 171
DEAAHRERR V LAHEE L+DHGVE+AL P H+EA
Sbjct: 249 DEAAHRERRPVCLAHEEPLQDHGVELALGPPHQEA 145
Score = 143 bits (307), Expect(2) = 1e-038
Identities = 64/127 (50%), Positives = 73/127 (57%)
Frame = +2 / +3
Query: 188 DKEQLQRRDPQAPLHEXXXXXXXXXXXXRQVHGGEG*SDRRDCGHRDRRQEDQRGAGDEG 367
D+E +QRRDP+A LHE RQVHG EG DR D GH R E R G+EG
Sbjct: 162 DQEPVQRRDPEAALHEQDKPAAALDAPPRQVHGWEGGQDRCDRGHHHR*PEGLRDTGNEG 341
Query: 368 LRAQVH*DSEGQDHQCWRRVPHLRPARAPCPTWAKHXXXXXXXXXXXXCQALRACTRSAS 547
RAQVH D EGQD Q W RVP+L PAR PC W +H C AL +RSA+
Sbjct: 342 GRAQVHRDGEGQDCQRWWRVPYL*PARPPCSAWTEHASPEGSQERQGSC*ALWQSSRSAT 521
Query: 548 QPHQALC 568
QPHQA+C
Sbjct: 522 QPHQAIC 542
Score = 55.1 bits (114), Expect(2) = 6e-076
Identities = 18/20 (90%), Positives = 18/20 (90%)
Frame = -2 / -2
Query: 132 TWAPCAWSSCCGRRLRDRYP 73
TWAPCAWSSCCGRR R RYP
Sbjct: 106 TWAPCAWSSCCGRRRRGRYP 47
Score = 36.3 bits (73), Expect(2) = 1e-038
Identities = 15/22 (68%), Positives = 15/22 (68%)
Frame = +2 / +3
Query: 74 GYXXXXXXPQQEDQAHGAQVRR 139
GY PQQEDQAHGAQV R
Sbjct: 48 GYRPRRRRPQQEDQAHGAQVGR 113
>gb|CA029760.1|CA029760 HX05C06r HX Hordeum vulgare subsp. vulgare cDNA clone HX05C06
5-PRIME, mRNA sequence
Length = 664
Score = 413 bits (896), Expect = e-115
Identities = 173/188 (92%), Positives = 183/188 (97%)
Frame = +3 / +2
Query: 72 MGIDLVAGGRNKKTKRTAPKSDDVYLKLLVKLYRFLVRRTKSNFNAVILKRLFMSKTNRP 251
+GIDLVAGGRNK+TKRTAPKSDDVYLKLLVKLYRFLVRRTKS FNAVILKRLFMSKTNRP
Sbjct: 74 LGIDLVAGGRNKRTKRTAPKSDDVYLKLLVKLYRFLVRRTKSQFNAVILKRLFMSKTNRP 253
Query: 252 PLSMRRLVRFMEGKGDQIAVIVGTVTDDKRISEVPAMKVCALRFTETARARIINAGGECL 431
PLSMRRLVRFM+GK D+IAVIVGT+TDD+R+ E+PAMKV ALRFTETARARI+NAGGECL
Sbjct: 254 PLSMRRLVRFMDGKADKIAVIVGTITDDQRVYEIPAMKVAALRFTETARARIVNAGGECL 433
Query: 432 TFDQLALRAPLGQNTVLLRGPKNAREAVRHFGPAPGVPHSHTKPYVRSKGRKFEKARGRR 611
TFDQLALRAPLGQNT+LLRGPKNAREAVRHFG APGVPHSHTKPYVRSKGRKFEKARGRR
Sbjct: 434 TFDQLALRAPLGQNTLLLRGPKNAREAVRHFGKAPGVPHSHTKPYVRSKGRKFEKARGRR 613
Query: 612 NSRGFKV* 635
NSRGFKV*
Sbjct: 614 NSRGFKV* 637
Score = 270 bits (585), Expect = 5e-072
Identities = 128/167 (76%), Positives = 129/167 (77%)
Frame = -1 / -2
Query: 574 ERT*GLVWL*GTPGAGPKCLTASLAFLGPLSRTVFCPSGARSASWSKVRHSPPALMILAL 395
ERT GLVWL GTPGA PKCLTASLAFLGPL R+VFCPSGAR ASWSKVRHSPPAL ILAL
Sbjct: 576 ERTYGLVWLCGTPGALPKCLTASLAFLGPLRRSVFCPSGARRASWSKVRHSPPALTILAL 397
Query: 394 AVSVNLSAQTFIAGTSLILLSSVTVPTITAI*SPFPSMNLTRRRIESGGRLVLLMKRRLR 215
AVSVNLSA TFIAG S L SSV VPTITAI S FPSMNLTRRRIESGGR VLLMK R R
Sbjct: 396 AVSVNLSAATFIAGIS*TLWSSVMVPTITAILSAFPSMNLTRRRIESGGRFVLLMKSRFR 217
Query: 214 ITALKLLFVXXXXXXXXXXXXXXXXXSDLGAVRLVFLLRPPATRSIP 74
ITAL L V SDLGAVRLV LLRPPATRSIP
Sbjct: 216 ITALNWLLVLRTRKR*SLTSSLRYTSSDLGAVRLVLLLRPPATRSIP 76
Score = 249 bits (539), Expect(2) = 6e-076
Identities = 105/155 (67%), Positives = 124/155 (80%)
Frame = -3 / -1
Query: 635 LDLEAPAVPPSSRLLKLPTLRANIRLGVAVRHSWCRPEVPDSFPSVLRTPQQNRVLPKWG 456
L+LEAPAVPPSS LL+ P L A+I LGVAV HSW +VP+SFP VL TPQ+ RVL K
Sbjct: 637 LNLEAPAVPPSSCLLEFPALGADIWLGVAVWHSWSFAKVPNSFPGVLGTPQEKRVLSKRS 458
Query: 455 TERELVEGEALSASIDDPGPRCLSEPERADLHRRHLADPLVVGHGAHNHGDLITLPLHEP 276
TE ELV+G+AL+ S+D+PGPR L EPER LH R+L DPLV+G GAH+H DL+ LP+HEP
Sbjct: 457 TEGELVKGKALATSVDNPGPRRLGEPERGHLHCRYLVDPLVIGDGAHDHSDLVRLPIHEP 278
Query: 275 DEAAHRERRAVGLAHEEALEDHGVEVALCPAHKEA 171
DEAAHRERR V LAHEE L+DHGVE+AL P H+EA
Sbjct: 277 DEAAHRERRPVCLAHEEPLQDHGVELALGPPHQEA 173
Score = 143 bits (307), Expect(2) = 1e-038
Identities = 64/127 (50%), Positives = 73/127 (57%)
Frame = +2 / +1
Query: 188 DKEQLQRRDPQAPLHEXXXXXXXXXXXXRQVHGGEG*SDRRDCGHRDRRQEDQRGAGDEG 367
D+E +QRRDP+A LHE RQVHG EG DR D GH R E R G+EG
Sbjct: 190 DQEPVQRRDPEAALHEQDKPAAALDAPPRQVHGWEGGQDRCDRGHHHR*PEGLRDTGNEG 369
Query: 368 LRAQVH*DSEGQDHQCWRRVPHLRPARAPCPTWAKHXXXXXXXXXXXXCQALRACTRSAS 547
RAQVH D EGQD Q W RVP+L PAR PC W +H C AL +RSA+
Sbjct: 370 GRAQVHRDGEGQDCQRWWRVPYL*PARPPCSAWTEHASPEGSQERQGSC*ALWQSSRSAT 549
Query: 548 QPHQALC 568
QPHQA+C
Sbjct: 550 QPHQAIC 570
Score = 55.1 bits (114), Expect(2) = 6e-076
Identities = 18/20 (90%), Positives = 18/20 (90%)
Frame = -2 / -3
Query: 132 TWAPCAWSSCCGRRLRDRYP 73
TWAPCAWSSCCGRR R RYP
Sbjct: 134 TWAPCAWSSCCGRRRRGRYP 75
Score = 36.3 bits (73), Expect(2) = 1e-038
Identities = 15/22 (68%), Positives = 15/22 (68%)
Frame = +2 / +1
Query: 74 GYXXXXXXPQQEDQAHGAQVRR 139
GY PQQEDQAHGAQV R
Sbjct: 76 GYRPRRRRPQQEDQAHGAQVGR 141
>gb|CA029893.1|CA029893 HX05I04r HX Hordeum vulgare subsp. vulgare cDNA clone HX05I04
5-PRIME, mRNA sequence
Length = 665
Score = 413 bits (896), Expect = e-115
Identities = 173/188 (92%), Positives = 183/188 (97%)
Frame = +3 / +1
Query: 72 MGIDLVAGGRNKKTKRTAPKSDDVYLKLLVKLYRFLVRRTKSNFNAVILKRLFMSKTNRP 251
+GIDLVAGGRNK+TKRTAPKSDDVYLKLLVKLYRFLVRRTKS FNAVILKRLFMSKTNRP
Sbjct: 73 LGIDLVAGGRNKRTKRTAPKSDDVYLKLLVKLYRFLVRRTKSQFNAVILKRLFMSKTNRP 252
Query: 252 PLSMRRLVRFMEGKGDQIAVIVGTVTDDKRISEVPAMKVCALRFTETARARIINAGGECL 431
PLSMRRLVRFM+GK D+IAVIVGT+TDD+R+ E+PAMKV ALRFTETARARI+NAGGECL
Sbjct: 253 PLSMRRLVRFMDGKADKIAVIVGTITDDQRVYEIPAMKVAALRFTETARARIVNAGGECL 432
Query: 432 TFDQLALRAPLGQNTVLLRGPKNAREAVRHFGPAPGVPHSHTKPYVRSKGRKFEKARGRR 611
TFDQLALRAPLGQNT+LLRGPKNAREAVRHFG APGVPHSHTKPYVRSKGRKFEKARGRR
Sbjct: 433 TFDQLALRAPLGQNTLLLRGPKNAREAVRHFGKAPGVPHSHTKPYVRSKGRKFEKARGRR 612
Query: 612 NSRGFKV* 635
NSRGFKV*
Sbjct: 613 NSRGFKV* 636
Score = 270 bits (585), Expect = 5e-072
Identities = 128/167 (76%), Positives = 129/167 (77%)
Frame = -1 / -1
Query: 574 ERT*GLVWL*GTPGAGPKCLTASLAFLGPLSRTVFCPSGARSASWSKVRHSPPALMILAL 395
ERT GLVWL GTPGA PKCLTASLAFLGPL R+VFCPSGAR ASWSKVRHSPPAL ILAL
Sbjct: 575 ERTYGLVWLCGTPGALPKCLTASLAFLGPLRRSVFCPSGARRASWSKVRHSPPALTILAL 396
Query: 394 AVSVNLSAQTFIAGTSLILLSSVTVPTITAI*SPFPSMNLTRRRIESGGRLVLLMKRRLR 215
AVSVNLSA TFIAG S L SSV VPTITAI S FPSMNLTRRRIESGGR VLLMK R R
Sbjct: 395 AVSVNLSAATFIAGIS*TLWSSVMVPTITAILSAFPSMNLTRRRIESGGRFVLLMKSRFR 216
Query: 214 ITALKLLFVXXXXXXXXXXXXXXXXXSDLGAVRLVFLLRPPATRSIP 74
ITAL L V SDLGAVRLV LLRPPATRSIP
Sbjct: 215 ITALNWLLVLRTRKR*SLTSSLRYTSSDLGAVRLVLLLRPPATRSIP 75
Score = 249 bits (539), Expect(2) = 6e-076
Identities = 105/155 (67%), Positives = 124/155 (80%)
Frame = -3 / -3
Query: 635 LDLEAPAVPPSSRLLKLPTLRANIRLGVAVRHSWCRPEVPDSFPSVLRTPQQNRVLPKWG 456
L+LEAPAVPPSS LL+ P L A+I LGVAV HSW +VP+SFP VL TPQ+ RVL K
Sbjct: 636 LNLEAPAVPPSSCLLEFPALGADIWLGVAVWHSWSFAKVPNSFPGVLGTPQEKRVLSKRS 457
Query: 455 TERELVEGEALSASIDDPGPRCLSEPERADLHRRHLADPLVVGHGAHNHGDLITLPLHEP 276
TE ELV+G+AL+ S+D+PGPR L EPER LH R+L DPLV+G GAH+H DL+ LP+HEP
Sbjct: 456 TEGELVKGKALATSVDNPGPRRLGEPERGHLHCRYLVDPLVIGDGAHDHSDLVRLPIHEP 277
Query: 275 DEAAHRERRAVGLAHEEALEDHGVEVALCPAHKEA 171
DEAAHRERR V LAHEE L+DHGVE+AL P H+EA
Sbjct: 276 DEAAHRERRPVCLAHEEPLQDHGVELALGPPHQEA 172
Score = 143 bits (307), Expect(2) = 1e-038
Identities = 64/127 (50%), Positives = 73/127 (57%)
Frame = +2 / +3
Query: 188 DKEQLQRRDPQAPLHEXXXXXXXXXXXXRQVHGGEG*SDRRDCGHRDRRQEDQRGAGDEG 367
D+E +QRRDP+A LHE RQVHG EG DR D GH R E R G+EG
Sbjct: 189 DQEPVQRRDPEAALHEQDKPAAALDAPPRQVHGWEGGQDRCDRGHHHR*PEGLRDTGNEG 368
Query: 368 LRAQVH*DSEGQDHQCWRRVPHLRPARAPCPTWAKHXXXXXXXXXXXXCQALRACTRSAS 547
RAQVH D EGQD Q W RVP+L PAR PC W +H C AL +RSA+
Sbjct: 369 GRAQVHRDGEGQDCQRWWRVPYL*PARPPCSAWTEHASPEGSQERQGSC*ALWQSSRSAT 548
Query: 548 QPHQALC 568
QPHQA+C
Sbjct: 549 QPHQAIC 569
Score = 55.1 bits (114), Expect(2) = 6e-076
Identities = 18/20 (90%), Positives = 18/20 (90%)
Frame = -2 / -2
Query: 132 TWAPCAWSSCCGRRLRDRYP 73
TWAPCAWSSCCGRR R RYP
Sbjct: 133 TWAPCAWSSCCGRRRRGRYP 74
Score = 36.3 bits (73), Expect(2) = 1e-038
Identities = 15/22 (68%), Positives = 15/22 (68%)
Frame = +2 / +3
Query: 74 GYXXXXXXPQQEDQAHGAQVRR 139
GY PQQEDQAHGAQV R
Sbjct: 75 GYRPRRRRPQQEDQAHGAQVGR 140
>gb|CA031805.1|CA031805 HX11C24r HX Hordeum vulgare subsp. vulgare cDNA clone HX11C24
5-PRIME, mRNA sequence
Length = 636
Score = 413 bits (896), Expect = e-115
Identities = 173/188 (92%), Positives = 183/188 (97%)
Frame = +3 / +3
Query: 72 MGIDLVAGGRNKKTKRTAPKSDDVYLKLLVKLYRFLVRRTKSNFNAVILKRLFMSKTNRP 251
+GIDLVAGGRNK+TKRTAPKSDDVYLKLLVKLYRFLVRRTKS FNAVILKRLFMSKTNRP
Sbjct: 60 LGIDLVAGGRNKRTKRTAPKSDDVYLKLLVKLYRFLVRRTKSQFNAVILKRLFMSKTNRP 239
Query: 252 PLSMRRLVRFMEGKGDQIAVIVGTVTDDKRISEVPAMKVCALRFTETARARIINAGGECL 431
PLSMRRLVRFM+GK D+IAVIVGT+TDD+R+ E+PAMKV ALRFTETARARI+NAGGECL
Sbjct: 240 PLSMRRLVRFMDGKADKIAVIVGTITDDQRVYEIPAMKVAALRFTETARARIVNAGGECL 419
Query: 432 TFDQLALRAPLGQNTVLLRGPKNAREAVRHFGPAPGVPHSHTKPYVRSKGRKFEKARGRR 611
TFDQLALRAPLGQNT+LLRGPKNAREAVRHFG APGVPHSHTKPYVRSKGRKFEKARGRR
Sbjct: 420 TFDQLALRAPLGQNTLLLRGPKNAREAVRHFGKAPGVPHSHTKPYVRSKGRKFEKARGRR 599
Query: 612 NSRGFKV* 635
NSRGFKV*
Sbjct: 600 NSRGFKV* 623
Score = 270 bits (585), Expect = 5e-072
Identities = 128/167 (76%), Positives = 129/167 (77%)
Frame = -1 / -3
Query: 574 ERT*GLVWL*GTPGAGPKCLTASLAFLGPLSRTVFCPSGARSASWSKVRHSPPALMILAL 395
ERT GLVWL GTPGA PKCLTASLAFLGPL R+VFCPSGAR ASWSKVRHSPPAL ILAL
Sbjct: 562 ERTYGLVWLCGTPGALPKCLTASLAFLGPLRRSVFCPSGARRASWSKVRHSPPALTILAL 383
Query: 394 AVSVNLSAQTFIAGTSLILLSSVTVPTITAI*SPFPSMNLTRRRIESGGRLVLLMKRRLR 215
AVSVNLSA TFIAG S L SSV VPTITAI S FPSMNLTRRRIESGGR VLLMK R R
Sbjct: 382 AVSVNLSAATFIAGIS*TLWSSVMVPTITAILSAFPSMNLTRRRIESGGRFVLLMKSRFR 203
Query: 214 ITALKLLFVXXXXXXXXXXXXXXXXXSDLGAVRLVFLLRPPATRSIP 74
ITAL L V SDLGAVRLV LLRPPATRSIP
Sbjct: 202 ITALNWLLVLRTRKR*SLTSSLRYTSSDLGAVRLVLLLRPPATRSIP 62
Score = 249 bits (539), Expect(2) = 6e-076
Identities = 105/155 (67%), Positives = 124/155 (80%)
Frame = -3 / -2
Query: 635 LDLEAPAVPPSSRLLKLPTLRANIRLGVAVRHSWCRPEVPDSFPSVLRTPQQNRVLPKWG 456
L+LEAPAVPPSS LL+ P L A+I LGVAV HSW +VP+SFP VL TPQ+ RVL K
Sbjct: 623 LNLEAPAVPPSSCLLEFPALGADIWLGVAVWHSWSFAKVPNSFPGVLGTPQEKRVLSKRS 444
Query: 455 TERELVEGEALSASIDDPGPRCLSEPERADLHRRHLADPLVVGHGAHNHGDLITLPLHEP 276
TE ELV+G+AL+ S+D+PGPR L EPER LH R+L DPLV+G GAH+H DL+ LP+HEP
Sbjct: 443 TEGELVKGKALATSVDNPGPRRLGEPERGHLHCRYLVDPLVIGDGAHDHSDLVRLPIHEP 264
Query: 275 DEAAHRERRAVGLAHEEALEDHGVEVALCPAHKEA 171
DEAAHRERR V LAHEE L+DHGVE+AL P H+EA
Sbjct: 263 DEAAHRERRPVCLAHEEPLQDHGVELALGPPHQEA 159
Score = 143 bits (307), Expect(2) = 1e-038
Identities = 64/127 (50%), Positives = 73/127 (57%)
Frame = +2 / +2
Query: 188 DKEQLQRRDPQAPLHEXXXXXXXXXXXXRQVHGGEG*SDRRDCGHRDRRQEDQRGAGDEG 367
D+E +QRRDP+A LHE RQVHG EG DR D GH R E R G+EG
Sbjct: 176 DQEPVQRRDPEAALHEQDKPAAALDAPPRQVHGWEGGQDRCDRGHHHR*PEGLRDTGNEG 355
Query: 368 LRAQVH*DSEGQDHQCWRRVPHLRPARAPCPTWAKHXXXXXXXXXXXXCQALRACTRSAS 547
RAQVH D EGQD Q W RVP+L PAR PC W +H C AL +RSA+
Sbjct: 356 GRAQVHRDGEGQDCQRWWRVPYL*PARPPCSAWTEHASPEGSQERQGSC*ALWQSSRSAT 535
Query: 548 QPHQALC 568
QPHQA+C
Sbjct: 536 QPHQAIC 556
Score = 55.1 bits (114), Expect(2) = 6e-076
Identities = 18/20 (90%), Positives = 18/20 (90%)
Frame = -2 / -1
Query: 132 TWAPCAWSSCCGRRLRDRYP 73
TWAPCAWSSCCGRR R RYP
Sbjct: 120 TWAPCAWSSCCGRRRRGRYP 61
Score = 36.3 bits (73), Expect(2) = 1e-038
Identities = 15/22 (68%), Positives = 15/22 (68%)
Frame = +2 / +2
Query: 74 GYXXXXXXPQQEDQAHGAQVRR 139
GY PQQEDQAHGAQV R
Sbjct: 62 GYRPRRRRPQQEDQAHGAQVGR 127
>gb|CA028584.1|CA028584 HZ62I08r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ62I08
5-PRIME, mRNA sequence
Length = 561
Score = 406 bits (880), Expect = e-112
Identities = 170/186 (91%), Positives = 179/186 (96%)
Frame = +3 / +2
Query: 63 RTAMGIDLVAGGRNKKTKRTAPKSDDVYLKLLVKLYRFLVRRTKSNFNAVILKRLFMSKT 242
R MGIDLVAGGRNK+TKRTAPKSDDVYLKLLVKLYRFLVRRTKS FNAVILKRLFMSKT
Sbjct: 2 RGTMGIDLVAGGRNKRTKRTAPKSDDVYLKLLVKLYRFLVRRTKSQFNAVILKRLFMSKT 181
Query: 243 NRPPLSMRRLVRFMEGKGDQIAVIVGTVTDDKRISEVPAMKVCALRFTETARARIINAGG 422
NRPPLSMRRLVRFM+GK D+IAVIVGT+TDD+R+ E+PAMKV ALRFTETARARI+NAGG
Sbjct: 182 NRPPLSMRRLVRFMDGKADKIAVIVGTITDDQRVYEIPAMKVAALRFTETARARIVNAGG 361
Query: 423 ECLTFDQLALRAPLGQNTVLLRGPKNAREAVRHFGPAPGVPHSHTKPYVRSKGRKFEKAR 602
ECLTFDQLALRAPLGQNT+LLRGPKNAREAVRHFG APGVPHSHTKPYVRSKGRKFEKAR
Sbjct: 362 ECLTFDQLALRAPLGQNTLLLRGPKNAREAVRHFGKAPGVPHSHTKPYVRSKGRKFEKAR 541
Query: 603 GRRNSR 620
GRRNSR
Sbjct: 542 GRRNSR 559
Score = 274 bits (593), Expect = 4e-073
Identities = 130/171 (76%), Positives = 131/171 (76%)
Frame = -1 / -1
Query: 574 ERT*GLVWL*GTPGAGPKCLTASLAFLGPLSRTVFCPSGARSASWSKVRHSPPALMILAL 395
ERT GLVWL GTPGA PKCLTASLAFLGPL R+VFCPSGAR ASWSKVRHSPPAL ILAL
Sbjct: 513 ERTYGLVWLCGTPGALPKCLTASLAFLGPLRRSVFCPSGARRASWSKVRHSPPALTILAL 334
Query: 394 AVSVNLSAQTFIAGTSLILLSSVTVPTITAI*SPFPSMNLTRRRIESGGRLVLLMKRRLR 215
AVSVNLSA TFIAG S L SSV VPTITAI S FPSMNLTRRRIESGGR VLLMK R R
Sbjct: 333 AVSVNLSAATFIAGIS*TLWSSVMVPTITAILSAFPSMNLTRRRIESGGRFVLLMKSRFR 154
Query: 214 ITALKLLFVXXXXXXXXXXXXXXXXXSDLGAVRLVFLLRPPATRSIPMAVR 62
ITAL L V SDLGAVRLV LLRPPATRSIPM R
Sbjct: 153 ITALNWLLVLRTRKR*SLTSSLRYTSSDLGAVRLVLLLRPPATRSIPMVPR 1
Score = 241 bits (521), Expect(2) = 5e-075
Identities = 101/150 (67%), Positives = 119/150 (79%)
Frame = -3 / -3
Query: 620 PAVPPSSRLLKLPTLRANIRLGVAVRHSWCRPEVPDSFPSVLRTPQQNRVLPKWGTEREL 441
PAVPPSS LL+ P L A+I LGVAV HSW +VP+SFP VL TPQ+ RVL K TE EL
Sbjct: 559 PAVPPSSCLLEFPALGADIWLGVAVWHSWSFAKVPNSFPGVLGTPQEKRVLSKRSTEGEL 380
Query: 440 VEGEALSASIDDPGPRCLSEPERADLHRRHLADPLVVGHGAHNHGDLITLPLHEPDEAAH 261
V+G+AL+ S+D+PGPR L EPER LH R+L DPLV+G GAH+H DL+ LP+HEPDEAAH
Sbjct: 379 VKGKALATSVDNPGPRRLGEPERGHLHCRYLVDPLVIGDGAHDHSDLVRLPIHEPDEAAH 200
Query: 260 RERRAVGLAHEEALEDHGVEVALCPAHKEA 171
RERR V LAHEE L+DHGVE+AL P H+EA
Sbjct: 199 RERRPVCLAHEEPLQDHGVELALGPPHQEA 110
Score = 143 bits (307), Expect(2) = 1e-039
Identities = 64/127 (50%), Positives = 73/127 (57%)
Frame = +2 / +1
Query: 188 DKEQLQRRDPQAPLHEXXXXXXXXXXXXRQVHGGEG*SDRRDCGHRDRRQEDQRGAGDEG 367
D+E +QRRDP+A LHE RQVHG EG DR D GH R E R G+EG
Sbjct: 127 DQEPVQRRDPEAALHEQDKPAAALDAPPRQVHGWEGGQDRCDRGHHHR*PEGLRDTGNEG 306
Query: 368 LRAQVH*DSEGQDHQCWRRVPHLRPARAPCPTWAKHXXXXXXXXXXXXCQALRACTRSAS 547
RAQVH D EGQD Q W RVP+L PAR PC W +H C AL +RSA+
Sbjct: 307 GRAQVHRDGEGQDCQRWWRVPYL*PARPPCSAWTEHASPEGSQERQGSC*ALWQSSRSAT 486
Query: 548 QPHQALC 568
QPHQA+C
Sbjct: 487 QPHQAIC 507
Score = 60.2 bits (125), Expect(2) = 5e-075
Identities = 19/21 (90%), Positives = 19/21 (90%)
Frame = -2 / -2
Query: 132 TWAPCAWSSCCGRRLRDRYPW 70
TWAPCAWSSCCGRR R RYPW
Sbjct: 71 TWAPCAWSSCCGRRRRGRYPW 9
Score = 40.0 bits (81), Expect(2) = 1e-039
Identities = 16/23 (69%), Positives = 16/23 (69%)
Frame = +2 / +1
Query: 71 HGYXXXXXXPQQEDQAHGAQVRR 139
HGY PQQEDQAHGAQV R
Sbjct: 10 HGYRPRRRRPQQEDQAHGAQVGR 78
>gb|BU979070.1|BU979070 HA15B06r HA Hordeum vulgare subsp. vulgare cDNA clone HA15B06
5-PRIME, mRNA sequence
Length = 576
Score = 405 bits (879), Expect = e-112
Identities = 169/185 (91%), Positives = 178/185 (96%)
Frame = +3 / +1
Query: 60 HRTAMGIDLVAGGRNKKTKRTAPKSDDVYLKLLVKLYRFLVRRTKSNFNAVILKRLFMSK 239
HR MGIDLVAGGRNK+TKRTAPKSDDVYLKLLVKLYRFLVRRTKS FNAVILKRLFMSK
Sbjct: 22 HRGTMGIDLVAGGRNKRTKRTAPKSDDVYLKLLVKLYRFLVRRTKSQFNAVILKRLFMSK 201
Query: 240 TNRPPLSMRRLVRFMEGKGDQIAVIVGTVTDDKRISEVPAMKVCALRFTETARARIINAG 419
TNRPPLSMRRLVRFM+GK D+IAVIVGT+TDD+R+ E+PAMKV ALRFTETARARI+NAG
Sbjct: 202 TNRPPLSMRRLVRFMDGKADKIAVIVGTITDDQRVYEIPAMKVAALRFTETARARIVNAG 381
Query: 420 GECLTFDQLALRAPLGQNTVLLRGPKNAREAVRHFGPAPGVPHSHTKPYVRSKGRKFEKA 599
GECLTFDQLALRAPLGQNT+LLRGPKNAREAVRHFG APGVPHSHTKPYVRSKGRKFEKA
Sbjct: 382 GECLTFDQLALRAPLGQNTLLLRGPKNAREAVRHFGKAPGVPHSHTKPYVRSKGRKFEKA 561
Query: 600 RGRRN 614
RGRRN
Sbjct: 562 RGRRN 576
Score = 281 bits (608), Expect = 4e-075
Identities = 132/175 (75%), Positives = 134/175 (76%)
Frame = -1 / -2
Query: 574 ERT*GLVWL*GTPGAGPKCLTASLAFLGPLSRTVFCPSGARSASWSKVRHSPPALMILAL 395
ERT GLVWL GTPGA PKCLTASLAFLGPL R+VFCPSGAR ASWSKVRHSPPAL ILAL
Sbjct: 536 ERTYGLVWLCGTPGALPKCLTASLAFLGPLRRSVFCPSGARRASWSKVRHSPPALTILAL 357
Query: 394 AVSVNLSAQTFIAGTSLILLSSVTVPTITAI*SPFPSMNLTRRRIESGGRLVLLMKRRLR 215
AVSVNLSA TFIAG S L SSV VPTITAI S FPSMNLTRRRIESGGR VLLMK R R
Sbjct: 356 AVSVNLSAATFIAGIS*TLWSSVMVPTITAILSAFPSMNLTRRRIESGGRFVLLMKSRFR 177
Query: 214 ITALKLLFVXXXXXXXXXXXXXXXXXSDLGAVRLVFLLRPPATRSIPMAVRWRLQ 50
ITAL L V SDLGAVRLV LLRPPATRSIPM RW +Q
Sbjct: 176 ITALNWLLVLRTRKR*SLTSSLRYTSSDLGAVRLVLLLRPPATRSIPMVPRWWMQ 12
Score = 236 bits (510), Expect(2) = 2e-073
Identities = 99/148 (66%), Positives = 117/148 (79%)
Frame = -3 / -1
Query: 614 VPPSSRLLKLPTLRANIRLGVAVRHSWCRPEVPDSFPSVLRTPQQNRVLPKWGTERELVE 435
VPPSS LL+ P L A+I LGVAV HSW +VP+SFP VL TPQ+ RVL K TE ELV+
Sbjct: 576 VPPSSCLLEFPALGADIWLGVAVWHSWSFAKVPNSFPGVLGTPQEKRVLSKRSTEGELVK 397
Query: 434 GEALSASIDDPGPRCLSEPERADLHRRHLADPLVVGHGAHNHGDLITLPLHEPDEAAHRE 255
G+AL+ S+D+PGPR L EPER LH R+L DPLV+G GAH+H DL+ LP+HEPDEAAHRE
Sbjct: 396 GKALATSVDNPGPRRLGEPERGHLHCRYLVDPLVIGDGAHDHSDLVRLPIHEPDEAAHRE 217
Query: 254 RRAVGLAHEEALEDHGVEVALCPAHKEA 171
RR V LAHEE L+DHGVE+AL P H+EA
Sbjct: 216 RRPVCLAHEEPLQDHGVELALGPPHQEA 133
Score = 143 bits (307), Expect(2) = 1e-039
Identities = 64/127 (50%), Positives = 73/127 (57%)
Frame = +2 / +3
Query: 188 DKEQLQRRDPQAPLHEXXXXXXXXXXXXRQVHGGEG*SDRRDCGHRDRRQEDQRGAGDEG 367
D+E +QRRDP+A LHE RQVHG EG DR D GH R E R G+EG
Sbjct: 150 DQEPVQRRDPEAALHEQDKPAAALDAPPRQVHGWEGGQDRCDRGHHHR*PEGLRDTGNEG 329
Query: 368 LRAQVH*DSEGQDHQCWRRVPHLRPARAPCPTWAKHXXXXXXXXXXXXCQALRACTRSAS 547
RAQVH D EGQD Q W RVP+L PAR PC W +H C AL +RSA+
Sbjct: 330 GRAQVHRDGEGQDCQRWWRVPYL*PARPPCSAWTEHASPEGSQERQGSC*ALWQSSRSAT 509
Query: 548 QPHQALC 568
QPHQA+C
Sbjct: 510 QPHQAIC 530
Score = 60.2 bits (125), Expect(2) = 2e-073
Identities = 19/21 (90%), Positives = 19/21 (90%)
Frame = -2 / -3
Query: 132 TWAPCAWSSCCGRRLRDRYPW 70
TWAPCAWSSCCGRR R RYPW
Sbjct: 94 TWAPCAWSSCCGRRRRGRYPW 32
Score = 40.0 bits (81), Expect(2) = 1e-039
Identities = 16/23 (69%), Positives = 16/23 (69%)
Frame = +2 / +3
Query: 71 HGYXXXXXXPQQEDQAHGAQVRR 139
HGY PQQEDQAHGAQV R
Sbjct: 33 HGYRPRRRRPQQEDQAHGAQVGR 101
>gb|BU998287.1|BU998287 HI10J07r HI Hordeum vulgare subsp. vulgare cDNA clone HI10J07
5-PRIME, mRNA sequence
Length = 597
Score = 395 bits (857), Expect = e-109
Identities = 165/181 (91%), Positives = 174/181 (96%)
Frame = +3 / +3
Query: 60 HRTAMGIDLVAGGRNKKTKRTAPKSDDVYLKLLVKLYRFLVRRTKSNFNAVILKRLFMSK 239
HR MGIDLVAGGRNK+TKRTAPKSDDVYLKLLVKLYRFLVRRTKS FNAVILKRLFMSK
Sbjct: 54 HRGTMGIDLVAGGRNKRTKRTAPKSDDVYLKLLVKLYRFLVRRTKSQFNAVILKRLFMSK 233
Query: 240 TNRPPLSMRRLVRFMEGKGDQIAVIVGTVTDDKRISEVPAMKVCALRFTETARARIINAG 419
TNRPPLSMRRLVRFM+GK D+IAVIVGT+TDD+R+ E+PAMKV ALRFTETARARI+NAG
Sbjct: 234 TNRPPLSMRRLVRFMDGKADKIAVIVGTITDDQRVYEIPAMKVAALRFTETARARIVNAG 413
Query: 420 GECLTFDQLALRAPLGQNTVLLRGPKNAREAVRHFGPAPGVPHSHTKPYVRSKGRKFEKA 599
GECLTFDQLALRAPLGQNT+LLRGPKNAREAVRHFG APGVPHSHTKPYVRSKGRKFEKA
Sbjct: 414 GECLTFDQLALRAPLGQNTLLLRGPKNAREAVRHFGKAPGVPHSHTKPYVRSKGRKFEKA 593
Query: 600 R 602
R
Sbjct: 594 R 596
Score = 287 bits (621), Expect = 6e-077
Identities = 135/184 (73%), Positives = 139/184 (75%)
Frame = -1 / -3
Query: 574 ERT*GLVWL*GTPGAGPKCLTASLAFLGPLSRTVFCPSGARSASWSKVRHSPPALMILAL 395
ERT GLVWL GTPGA PKCLTASLAFLGPL R+VFCPSGAR ASWSKVRHSPPAL ILAL
Sbjct: 568 ERTYGLVWLCGTPGALPKCLTASLAFLGPLRRSVFCPSGARRASWSKVRHSPPALTILAL 389
Query: 394 AVSVNLSAQTFIAGTSLILLSSVTVPTITAI*SPFPSMNLTRRRIESGGRLVLLMKRRLR 215
AVSVNLSA TFIAG S L SSV VPTITAI S FPSMNLTRRRIESGGR VLLMK R R
Sbjct: 388 AVSVNLSAATFIAGIS*TLWSSVMVPTITAILSAFPSMNLTRRRIESGGRFVLLMKSRFR 209
Query: 214 ITALKLLFVXXXXXXXXXXXXXXXXXSDLGAVRLVFLLRPPATRSIPMAVRWRLQRRQDG 35
ITAL L V SDLGAVRLV LLRPPATRSIPM RW +Q+R+
Sbjct: 208 ITALNWLLVLRTRKR*SLTSSLRYTSSDLGAVRLVLLLRPPATRSIPMVPRWWMQQRRGS 29
Query: 34 RGAR 23
R R
Sbjct: 28 RRQR 17
Score = 226 bits (488), Expect(2) = 2e-070
Identities = 95/144 (65%), Positives = 113/144 (78%)
Frame = -3 / -2
Query: 602 SRLLKLPTLRANIRLGVAVRHSWCRPEVPDSFPSVLRTPQQNRVLPKWGTERELVEGEAL 423
S LL+ P L A+I LGVAV HSW +VP+SFP VL TPQ+ RVL K TE ELV+G+AL
Sbjct: 596 SCLLEFPALGADIWLGVAVWHSWSFAKVPNSFPGVLGTPQEKRVLSKRSTEGELVKGKAL 417
Query: 422 SASIDDPGPRCLSEPERADLHRRHLADPLVVGHGAHNHGDLITLPLHEPDEAAHRERRAV 243
+ S+D+PGPR L EPER LH R+L DPLV+G GAH+H DL+ LP+HEPDEAAHRERR V
Sbjct: 416 ATSVDNPGPRRLGEPERGHLHCRYLVDPLVIGDGAHDHSDLVRLPIHEPDEAAHRERRPV 237
Query: 242 GLAHEEALEDHGVEVALCPAHKEA 171
LAHEE L+DHGVE+AL P H+EA
Sbjct: 236 CLAHEEPLQDHGVELALGPPHQEA 165
Score = 143 bits (307), Expect(2) = 1e-039
Identities = 64/127 (50%), Positives = 73/127 (57%)
Frame = +2 / +2
Query: 188 DKEQLQRRDPQAPLHEXXXXXXXXXXXXRQVHGGEG*SDRRDCGHRDRRQEDQRGAGDEG 367
D+E +QRRDP+A LHE RQVHG EG DR D GH R E R G+EG
Sbjct: 182 DQEPVQRRDPEAALHEQDKPAAALDAPPRQVHGWEGGQDRCDRGHHHR*PEGLRDTGNEG 361
Query: 368 LRAQVH*DSEGQDHQCWRRVPHLRPARAPCPTWAKHXXXXXXXXXXXXCQALRACTRSAS 547
RAQVH D EGQD Q W RVP+L PAR PC W +H C AL +RSA+
Sbjct: 362 GRAQVHRDGEGQDCQRWWRVPYL*PARPPCSAWTEHASPEGSQERQGSC*ALWQSSRSAT 541
Query: 548 QPHQALC 568
QPHQA+C
Sbjct: 542 QPHQAIC 562
Score = 60.2 bits (125), Expect(2) = 2e-070
Identities = 19/21 (90%), Positives = 19/21 (90%)
Frame = -2 / -1
Query: 132 TWAPCAWSSCCGRRLRDRYPW 70
TWAPCAWSSCCGRR R RYPW
Sbjct: 126 TWAPCAWSSCCGRRRRGRYPW 64
Score = 40.0 bits (81), Expect(2) = 1e-039
Identities = 16/23 (69%), Positives = 16/23 (69%)
Frame = +2 / +2
Query: 71 HGYXXXXXXPQQEDQAHGAQVRR 139
HGY PQQEDQAHGAQV R
Sbjct: 65 HGYRPRRRRPQQEDQAHGAQVGR 133
>gb|BQ470360.1|BQ470360 HX02L09r HX Hordeum vulgare subsp. vulgare cDNA clone HX02L09
5-PRIME, mRNA sequence
Length = 592
Score = 391 bits (848), Expect = e-108
Identities = 163/179 (91%), Positives = 172/179 (96%)
Frame = +3 / +1
Query: 60 HRTAMGIDLVAGGRNKKTKRTAPKSDDVYLKLLVKLYRFLVRRTKSNFNAVILKRLFMSK 239
HR MGIDLVAGGRNK+TKRTAPKSDDVYLKLLVKLYRFLVRRTKS FNAVILKRLFMSK
Sbjct: 55 HRGTMGIDLVAGGRNKRTKRTAPKSDDVYLKLLVKLYRFLVRRTKSQFNAVILKRLFMSK 234
Query: 240 TNRPPLSMRRLVRFMEGKGDQIAVIVGTVTDDKRISEVPAMKVCALRFTETARARIINAG 419
TNRPPLSMRRLVRFM+GK D+IAVIVGT+TDD+R+ E+PAMKV ALRFTETARARI+NAG
Sbjct: 235 TNRPPLSMRRLVRFMDGKADKIAVIVGTITDDQRVYEIPAMKVAALRFTETARARIVNAG 414
Query: 420 GECLTFDQLALRAPLGQNTVLLRGPKNAREAVRHFGPAPGVPHSHTKPYVRSKGRKFEK 596
GECLTFDQLALRAPLGQNT+LLRGPKNAREAVRHFG APGVPHSHTKPYVRSKGRKFEK
Sbjct: 415 GECLTFDQLALRAPLGQNTLLLRGPKNAREAVRHFGKAPGVPHSHTKPYVRSKGRKFEK 591
Score = 287 bits (621), Expect = 6e-077
Identities = 135/184 (73%), Positives = 139/184 (75%)
Frame = -1 / -3
Query: 574 ERT*GLVWL*GTPGAGPKCLTASLAFLGPLSRTVFCPSGARSASWSKVRHSPPALMILAL 395
ERT GLVWL GTPGA PKCLTASLAFLGPL R+VFCPSGAR ASWSKVRHSPPAL ILAL
Sbjct: 569 ERTYGLVWLCGTPGALPKCLTASLAFLGPLRRSVFCPSGARRASWSKVRHSPPALTILAL 390
Query: 394 AVSVNLSAQTFIAGTSLILLSSVTVPTITAI*SPFPSMNLTRRRIESGGRLVLLMKRRLR 215
AVSVNLSA TFIAG S L SSV VPTITAI S FPSMNLTRRRIESGGR VLLMK R R
Sbjct: 389 AVSVNLSAATFIAGIS*TLWSSVMVPTITAILSAFPSMNLTRRRIESGGRFVLLMKSRFR 210
Query: 214 ITALKLLFVXXXXXXXXXXXXXXXXXSDLGAVRLVFLLRPPATRSIPMAVRWRLQRRQDG 35
ITAL L V SDLGAVRLV LLRPPATRSIPM RW +Q+R+
Sbjct: 209 ITALNWLLVLRTRKR*SLTSSLRYTSSDLGAVRLVLLLRPPATRSIPMVPRWWMQQRRGS 30
Query: 34 RGAR 23
R R
Sbjct: 29 RRQR 18
Score = 226 bits (487), Expect(2) = 2e-070
Identities = 94/142 (66%), Positives = 112/142 (78%)
Frame = -3 / -2
Query: 596 LLKLPTLRANIRLGVAVRHSWCRPEVPDSFPSVLRTPQQNRVLPKWGTERELVEGEALSA 417
LL+ P L A+I LGVAV HSW +VP+SFP VL TPQ+ RVL K TE ELV+G+AL+
Sbjct: 591 LLEFPALGADIWLGVAVWHSWSFAKVPNSFPGVLGTPQEKRVLSKRSTEGELVKGKALAT 412
Query: 416 SIDDPGPRCLSEPERADLHRRHLADPLVVGHGAHNHGDLITLPLHEPDEAAHRERRAVGL 237
S+D+PGPR L EPER LH R+L DPLV+G GAH+H DL+ LP+HEPDEAAHRERR V L
Sbjct: 411 SVDNPGPRRLGEPERGHLHCRYLVDPLVIGDGAHDHSDLVRLPIHEPDEAAHRERRPVCL 232
Query: 236 AHEEALEDHGVEVALCPAHKEA 171
AHEE L+DHGVE+AL P H+EA
Sbjct: 231 AHEEPLQDHGVELALGPPHQEA 166
Score = 143 bits (307), Expect(2) = 1e-039
Identities = 64/127 (50%), Positives = 73/127 (57%)
Frame = +2 / +3
Query: 188 DKEQLQRRDPQAPLHEXXXXXXXXXXXXRQVHGGEG*SDRRDCGHRDRRQEDQRGAGDEG 367
D+E +QRRDP+A LHE RQVHG EG DR D GH R E R G+EG
Sbjct: 183 DQEPVQRRDPEAALHEQDKPAAALDAPPRQVHGWEGGQDRCDRGHHHR*PEGLRDTGNEG 362
Query: 368 LRAQVH*DSEGQDHQCWRRVPHLRPARAPCPTWAKHXXXXXXXXXXXXCQALRACTRSAS 547
RAQVH D EGQD Q W RVP+L PAR PC W +H C AL +RSA+
Sbjct: 363 GRAQVHRDGEGQDCQRWWRVPYL*PARPPCSAWTEHASPEGSQERQGSC*ALWQSSRSAT 542
Query: 548 QPHQALC 568
QPHQA+C
Sbjct: 543 QPHQAIC 563
Score = 60.2 bits (125), Expect(2) = 2e-070
Identities = 19/21 (90%), Positives = 19/21 (90%)
Frame = -2 / -1
Query: 132 TWAPCAWSSCCGRRLRDRYPW 70
TWAPCAWSSCCGRR R RYPW
Sbjct: 127 TWAPCAWSSCCGRRRRGRYPW 65
Score = 40.0 bits (81), Expect(2) = 1e-039
Identities = 16/23 (69%), Positives = 16/23 (69%)
Frame = +2 / +3
Query: 71 HGYXXXXXXPQQEDQAHGAQVRR 139
HGY PQQEDQAHGAQV R
Sbjct: 66 HGYRPRRRRPQQEDQAHGAQVGR 134
>gb|BU990707.1|BU990707 HF25N06r HF Hordeum vulgare subsp. vulgare cDNA clone HF25N06
5-PRIME, mRNA sequence
Length = 562
Score = 391 bits (848), Expect = e-108
Identities = 163/179 (91%), Positives = 172/179 (96%)
Frame = +3 / +2
Query: 60 HRTAMGIDLVAGGRNKKTKRTAPKSDDVYLKLLVKLYRFLVRRTKSNFNAVILKRLFMSK 239
HR MGIDLVAGGRNK+TKRTAPKSDDVYLKLLVKLYRFLVRRTKS FNAVILKRLFMSK
Sbjct: 26 HRGTMGIDLVAGGRNKRTKRTAPKSDDVYLKLLVKLYRFLVRRTKSQFNAVILKRLFMSK 205
Query: 240 TNRPPLSMRRLVRFMEGKGDQIAVIVGTVTDDKRISEVPAMKVCALRFTETARARIINAG 419
TNRPPLSMRRLVRFM+GK D+IAVIVGT+TDD+R+ E+PAMKV ALRFTETARARI+NAG
Sbjct: 206 TNRPPLSMRRLVRFMDGKADKIAVIVGTITDDQRVYEIPAMKVAALRFTETARARIVNAG 385
Query: 420 GECLTFDQLALRAPLGQNTVLLRGPKNAREAVRHFGPAPGVPHSHTKPYVRSKGRKFEK 596
GECLTFDQLALRAPLGQNT+LLRGPKNAREAVRHFG APGVPHSHTKPYVRSKGRKFEK
Sbjct: 386 GECLTFDQLALRAPLGQNTLLLRGPKNAREAVRHFGKAPGVPHSHTKPYVRSKGRKFEK 562
Score = 284 bits (615), Expect = 4e-076
Identities = 133/178 (74%), Positives = 137/178 (76%)
Frame = -1 / -2
Query: 574 ERT*GLVWL*GTPGAGPKCLTASLAFLGPLSRTVFCPSGARSASWSKVRHSPPALMILAL 395
ERT GLVWL GTPGA PKCLTASLAFLGPL R+VFCPSGAR ASWSKVRHSPPAL ILAL
Sbjct: 540 ERTYGLVWLCGTPGALPKCLTASLAFLGPLRRSVFCPSGARRASWSKVRHSPPALTILAL 361
Query: 394 AVSVNLSAQTFIAGTSLILLSSVTVPTITAI*SPFPSMNLTRRRIESGGRLVLLMKRRLR 215
AVSVNLSA TFIAG S L SSV VPTITAI S FPSMNLTRRRIESGGR VLLMK R R
Sbjct: 360 AVSVNLSAATFIAGIS*TLWSSVMVPTITAILSAFPSMNLTRRRIESGGRFVLLMKSRFR 181
Query: 214 ITALKLLFVXXXXXXXXXXXXXXXXXSDLGAVRLVFLLRPPATRSIPMAVRWRLQRRQ 41
ITAL L V SDLGAVRLV LLRPPATRSIPM RW +Q+R+
Sbjct: 180 ITALNWLLVLRTRKR*SLTSSLRYTSSDLGAVRLVLLLRPPATRSIPMVPRWWMQQRR 7
Score = 226 bits (487), Expect(2) = 2e-070
Identities = 94/142 (66%), Positives = 112/142 (78%)
Frame = -3 / -1
Query: 596 LLKLPTLRANIRLGVAVRHSWCRPEVPDSFPSVLRTPQQNRVLPKWGTERELVEGEALSA 417
LL+ P L A+I LGVAV HSW +VP+SFP VL TPQ+ RVL K TE ELV+G+AL+
Sbjct: 562 LLEFPALGADIWLGVAVWHSWSFAKVPNSFPGVLGTPQEKRVLSKRSTEGELVKGKALAT 383
Query: 416 SIDDPGPRCLSEPERADLHRRHLADPLVVGHGAHNHGDLITLPLHEPDEAAHRERRAVGL 237
S+D+PGPR L EPER LH R+L DPLV+G GAH+H DL+ LP+HEPDEAAHRERR V L
Sbjct: 382 SVDNPGPRRLGEPERGHLHCRYLVDPLVIGDGAHDHSDLVRLPIHEPDEAAHRERRPVCL 203
Query: 236 AHEEALEDHGVEVALCPAHKEA 171
AHEE L+DHGVE+AL P H+EA
Sbjct: 202 AHEEPLQDHGVELALGPPHQEA 137
Score = 143 bits (307), Expect(2) = 1e-039
Identities = 64/127 (50%), Positives = 73/127 (57%)
Frame = +2 / +1
Query: 188 DKEQLQRRDPQAPLHEXXXXXXXXXXXXRQVHGGEG*SDRRDCGHRDRRQEDQRGAGDEG 367
D+E +QRRDP+A LHE RQVHG EG DR D GH R E R G+EG
Sbjct: 154 DQEPVQRRDPEAALHEQDKPAAALDAPPRQVHGWEGGQDRCDRGHHHR*PEGLRDTGNEG 333
Query: 368 LRAQVH*DSEGQDHQCWRRVPHLRPARAPCPTWAKHXXXXXXXXXXXXCQALRACTRSAS 547
RAQVH D EGQD Q W RVP+L PAR PC W +H C AL +RSA+
Sbjct: 334 GRAQVHRDGEGQDCQRWWRVPYL*PARPPCSAWTEHASPEGSQERQGSC*ALWQSSRSAT 513
Query: 548 QPHQALC 568
QPHQA+C
Sbjct: 514 QPHQAIC 534
Score = 60.2 bits (125), Expect(2) = 2e-070
Identities = 19/21 (90%), Positives = 19/21 (90%)
Frame = -2 / -3
Query: 132 TWAPCAWSSCCGRRLRDRYPW 70
TWAPCAWSSCCGRR R RYPW
Sbjct: 98 TWAPCAWSSCCGRRRRGRYPW 36
Score = 40.0 bits (81), Expect(2) = 1e-039
Identities = 16/23 (69%), Positives = 16/23 (69%)
Frame = +2 / +1
Query: 71 HGYXXXXXXPQQEDQAHGAQVRR 139
HGY PQQEDQAHGAQV R
Sbjct: 37 HGYRPRRRRPQQEDQAHGAQVGR 105
>gb|AV936748.1|AV936748 AV936748 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal5m06 3', mRNA sequence
Length = 741
Score = 248 bits (535), Expect(2) = e-107
Identities = 102/113 (90%), Positives = 108/113 (95%)
Frame = +3 / -1
Query: 303 IAVIVGTVTDDKRISEVPAMKVCALRFTETARARIINAGGECLTFDQLALRAPLGQNTVL 482
IAV+VGT+TDD RI E+PAMKV ALRFTETARARI+NAGGECLTFDQLALRAP G+NT+L
Sbjct: 498 IAVVVGTITDDMRIQEIPAMKVTALRFTETARARIVNAGGECLTFDQLALRAPTGENTIL 319
Query: 483 LRGPKNAREAVRHFGPAPGVPHSHTKPYVRSKGRKFEKARGRRNSRGFKV*VA 641
LRGPKNAREAVRHFG APGVPHSHTKPYVRSKGRKFEKARGRRNSRGFKV*VA
Sbjct: 318 LRGPKNAREAVRHFGKAPGVPHSHTKPYVRSKGRKFEKARGRRNSRGFKV*VA 160
Score = 162 bits (349), Expect(2) = e-107
Identities = 70/83 (84%), Positives = 75/83 (90%)
Frame = +3 / -1
Query: 69 AMGIDLVAGGRNKKTKRTAPKSDDVYLKLLVKLYRFLVRRTKSNFNAVILKRLFMSKTNR 248
AMGIDLVAGGRNK+TKR APKSDDVYLKLLVKLYRFLVRRTKS FNAVILKRLFMSKTNR
Sbjct: 735 AMGIDLVAGGRNKRTKRVAPKSDDVYLKLLVKLYRFLVRRTKSKFNAVILKRLFMSKTNR 556
Query: 249 PPLSMRRLVRFMEGKGDQIAVIV 317
PPLSMRRL FM+GK ++ +V
Sbjct: 555 PPLSMRRLSNFMKGKEEKNIAVV 487
Score = 160 bits (344), Expect(3) = 2e-060
Identities = 73/91 (80%), Positives = 76/91 (83%)
Frame = -1 / +2
Query: 574 ERT*GLVWL*GTPGAGPKCLTASLAFLGPLSRTVFCPSGARSASWSKVRHSPPALMILAL 395
ERT*GLVWL GTPGA PKCLTAS AFLGPL+R VF P GAR ASWSKVRHSPPAL ILAL
Sbjct: 227 ERT*GLVWLCGTPGALPKCLTASRAFLGPLNRIVFSPVGARRASWSKVRHSPPALTILAL 406
Query: 394 AVSVNLSAQTFIAGTSLILLSSVTVPTITAI 302
AVSVNL A TFIAG S I +SSV VPT TA+
Sbjct: 407 AVSVNLRAVTFIAGISWIRMSSVIVPTTTAM 499
Score = 146 bits (314), Expect = 1e-034
Identities = 64/117 (54%), Positives = 83/117 (70%)
Frame = -3 / +1
Query: 641 GHLDLEAPAVPPSSRLLKLPTLRANIRLGVAVRHSWCRPEVPDSFPSVLRTPQQNRVLPK 462
G+L+LEA AVPP++ LLKLPTL A+I LGVAVRH+ EVP +L +PQQ+RVLP
Sbjct: 160 GNLNLEATAVPPTTSLLKLPTLGAHIGLGVAVRHTRSLAEVPHRLTGILGSPQQDRVLPS 339
Query: 461 WGTERELVEGEALSASIDDPGPRCLSEPERADLHRRHLADPLVVGHGAHNHGDLITL 291
W TE +LV+ EAL SID+P PRCL EP+ +LH L DP V+ A+NH +++ L
Sbjct: 340 WSTESKLVKSEALPTSIDNPCPRCLCEPQSGNLHCWDLLDPHVICDCANNHSNVLLL 510
Score = 92.7 bits (196), Expect(3) = 1e-027
Identities = 48/89 (53%), Positives = 51/89 (57%)
Frame = -1 / +2
Query: 334 SSVTVPTITAI*SPFPSMNLTRRRIESGGRLVLLMKRRLRITALKLLFVXXXXXXXXXXX 155
S + T S FP M L RRR+ESGGRLVLLMK LR+TAL LL V
Sbjct: 470 SVIVPTTTAMFFSSFPFMKLERRRMESGGRLVLLMKSLLRMTALNLLLVLLTRKR*SLTR 649
Query: 154 XXXXXXSDLGAVRLVFLLRPPATRSIPMA 68
SDLGA RLV L PPATRSIPMA
Sbjct: 650 SLRYTSSDLGATRLVLLFLPPATRSIPMA 736
Score = 73.0 bits (153), Expect(4) = 2e-034
Identities = 27/54 (50%), Positives = 33/54 (61%)
Frame = +2 / -3
Query: 314 CGHRDRRQEDQRGAGDEGLRAQVH*DSEGQDHQCWRRVPHLRPARAPCPTWAKH 475
C H R D R +EG R++VH DSEG+D QCW VPH PA +PC W +H
Sbjct: 487 CWHNHR*HADPRDPSNEGYRSEVHRDSEGKDCQCWWGVPHF*PACSPCSNWGEH 326
Score = 69.8 bits (146), Expect(3) = 2e-060
Identities = 30/43 (69%), Positives = 33/43 (76%)
Frame = -3 / +1
Query: 302 LITLPLHEPDEAAHRERRAVGLAHEEALEDHGVEVALCPAHKE 174
L+ L LHE E AH ERRAVGLAHEE LED GVE+AL P H+E
Sbjct: 502 LLLLSLHEVGETAHGERRAVGLAHEEPLEDDGVELALGPPHQE 630
Score = 62.9 bits (131), Expect(4) = 2e-034
Identities = 36/63 (57%), Positives = 38/63 (60%)
Frame = +1 / -2
Query: 454 VPHLGKTRFC*GVLRTLGKLSGTSGLHQECLTATPSLMFARRVGSLRRREEGGTAGASRS 633
V LG+TR C*G R + GTS C TATPS M A RVGSLRR GGTA ASR
Sbjct: 347 VLQLGRTRSC*GDPRMPVRR*GTSARLLVCRTATPSPMCAPRVGSLRRLVVGGTAVASRF 168
Query: 634 KWP 642
K P
Sbjct: 167 KLP 159
Score = 41.8 bits (85), Expect(3) = 1e-027
Identities = 16/25 (64%), Positives = 17/25 (68%)
Frame = -2 / +3
Query: 591 QTSYPSSEHKAWCGCEALLVQARSA 517
QTSYP S H+AWCGC A RSA
Sbjct: 210 QTSYPWSAHRAWCGCAAHQEPCRSA 284
Score = 41.4 bits (84), Expect(3) = 2e-060
Identities = 14/21 (66%), Positives = 15/21 (71%)
Frame = -2 / +3
Query: 132 TWAPCAWSSCCGRRLRDRYPW 70
TWA AWSSC R+ R RYPW
Sbjct: 672 TWARRAWSSCSSRQRRGRYPW 734
Score = 35.4 bits (71), Expect(4) = 2e-034
Identities = 15/36 (41%), Positives = 19/36 (52%)
Frame = +2 / -3
Query: 188 DKEQLQRRDPQAPLHEXXXXXXXXXXXXRQVHGGEG 295
D+EQ+QRR PQ LHE Q+H G+G
Sbjct: 616 DQEQVQRRHPQEALHEQDQPPAALHAPSLQLHEGKG 509
Score = 30.4 bits (60), Expect(4) = 2e-034
Identities = 13/23 (56%), Positives = 14/23 (60%)
Frame = +2 / -3
Query: 71 HGYXXXXXXPQQEDQAHGAQVRR 139
HGY +QEDQA AQVRR
Sbjct: 733 HGYRPRRWREEQEDQARRAQVRR 665
Score = 26.7 bits (52), Expect(3) = 1e-027
Identities = 17/37 (45%), Positives = 18/37 (48%)
Frame = -2 / +3
Query: 489 PSAEPCFAQVGHXXXXXXXXGTLRQH**SWPSLSQ*T 379
PS C Q+ H GT QH* S PSLS *T
Sbjct: 312 PSTGSCSPQLEHGEQAGQK*GTPHQH*QSLPSLSL*T 422
>gb|BE602150.2|BE602150 HVSMEh0102M04f Hordeum vulgare 5-45 DAP spike EST library
HVcDNA0009 (5 to 45 DAP) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEh0102M04f, mRNA sequence
Length = 726
Score = 248 bits (535), Expect(2) = e-107
Identities = 102/113 (90%), Positives = 108/113 (95%)
Frame = +3 / +3
Query: 303 IAVIVGTVTDDKRISEVPAMKVCALRFTETARARIINAGGECLTFDQLALRAPLGQNTVL 482
IAV+VGT+TDD RI E+PAMKV ALRFTETARARI+NAGGECLTFDQLALRAP G+NT+L
Sbjct: 300 IAVVVGTITDDMRIQEIPAMKVTALRFTETARARIVNAGGECLTFDQLALRAPTGENTIL 479
Query: 483 LRGPKNAREAVRHFGPAPGVPHSHTKPYVRSKGRKFEKARGRRNSRGFKV*VA 641
LRGPKNAREAVRHFG APGVPHSHTKPYVRSKGRKFEKARGRRNSRGFKV*VA
Sbjct: 480 LRGPKNAREAVRHFGKAPGVPHSHTKPYVRSKGRKFEKARGRRNSRGFKV*VA 638
Score = 162 bits (349), Expect(2) = e-107
Identities = 70/83 (84%), Positives = 75/83 (90%)
Frame = +3 / +3
Query: 69 AMGIDLVAGGRNKKTKRTAPKSDDVYLKLLVKLYRFLVRRTKSNFNAVILKRLFMSKTNR 248
AMGIDLVAGGRNK+TKR APKSDDVYLKLLVKLYRFLVRRTKS FNAVILKRLFMSKTNR
Sbjct: 63 AMGIDLVAGGRNKRTKRVAPKSDDVYLKLLVKLYRFLVRRTKSKFNAVILKRLFMSKTNR 242
Query: 249 PPLSMRRLVRFMEGKGDQIAVIV 317
PPLSMRRL FM+GK ++ +V
Sbjct: 243 PPLSMRRLSNFMKGKEEKNIAVV 311
Score = 160 bits (344), Expect(3) = 2e-060
Identities = 73/91 (80%), Positives = 76/91 (83%)
Frame = -1 / -3
Query: 574 ERT*GLVWL*GTPGAGPKCLTASLAFLGPLSRTVFCPSGARSASWSKVRHSPPALMILAL 395
ERT*GLVWL GTPGA PKCLTAS AFLGPL+R VF P GAR ASWSKVRHSPPAL ILAL
Sbjct: 571 ERT*GLVWLCGTPGALPKCLTASRAFLGPLNRIVFSPVGARRASWSKVRHSPPALTILAL 392
Query: 394 AVSVNLSAQTFIAGTSLILLSSVTVPTITAI 302
AVSVNL A TFIAG S I +SSV VPT TA+
Sbjct: 391 AVSVNLRAVTFIAGISWIRMSSVIVPTTTAM 299
Score = 146 bits (314), Expect = 1e-034
Identities = 64/117 (54%), Positives = 83/117 (70%)
Frame = -3 / -2
Query: 641 GHLDLEAPAVPPSSRLLKLPTLRANIRLGVAVRHSWCRPEVPDSFPSVLRTPQQNRVLPK 462
G+L+LEA AVPP++ LLKLPTL A+I LGVAVRH+ EVP +L +PQQ+RVLP
Sbjct: 638 GNLNLEATAVPPTTSLLKLPTLGAHIGLGVAVRHTRSLAEVPHRLTGILGSPQQDRVLPS 459
Query: 461 WGTERELVEGEALSASIDDPGPRCLSEPERADLHRRHLADPLVVGHGAHNHGDLITL 291
W TE +LV+ EAL SID+P PRCL EP+ +LH L DP V+ A+NH +++ L
Sbjct: 458 WSTESKLVKSEALPTSIDNPCPRCLCEPQSGNLHCWDLLDPHVICDCANNHSNVLLL 288
Score = 92.7 bits (196), Expect(3) = 1e-027
Identities = 48/89 (53%), Positives = 51/89 (57%)
Frame = -1 / -3
Query: 334 SSVTVPTITAI*SPFPSMNLTRRRIESGGRLVLLMKRRLRITALKLLFVXXXXXXXXXXX 155
S + T S FP M L RRR+ESGGRLVLLMK LR+TAL LL V
Sbjct: 328 SVIVPTTTAMFFSSFPFMKLERRRMESGGRLVLLMKSLLRMTALNLLLVLLTRKR*SLTR 149
Query: 154 XXXXXXSDLGAVRLVFLLRPPATRSIPMA 68
SDLGA RLV L PPATRSIPMA
Sbjct: 148 SLRYTSSDLGATRLVLLFLPPATRSIPMA 62
Score = 73.0 bits (153), Expect(4) = 2e-034
Identities = 27/54 (50%), Positives = 33/54 (61%)
Frame = +2 / +2
Query: 314 CGHRDRRQEDQRGAGDEGLRAQVH*DSEGQDHQCWRRVPHLRPARAPCPTWAKH 475
C H R D R +EG R++VH DSEG+D QCW VPH PA +PC W +H
Sbjct: 311 CWHNHR*HADPRDPSNEGYRSEVHRDSEGKDCQCWWGVPHF*PACSPCSNWGEH 472
Score = 69.8 bits (146), Expect(3) = 2e-060
Identities = 30/43 (69%), Positives = 33/43 (76%)
Frame = -3 / -2
Query: 302 LITLPLHEPDEAAHRERRAVGLAHEEALEDHGVEVALCPAHKE 174
L+ L LHE E AH ERRAVGLAHEE LED GVE+AL P H+E
Sbjct: 296 LLLLSLHEVGETAHGERRAVGLAHEEPLEDDGVELALGPPHQE 168
Score = 62.9 bits (131), Expect(4) = 2e-034
Identities = 36/63 (57%), Positives = 38/63 (60%)
Frame = +1 / +1
Query: 454 VPHLGKTRFC*GVLRTLGKLSGTSGLHQECLTATPSLMFARRVGSLRRREEGGTAGASRS 633
V LG+TR C*G R + GTS C TATPS M A RVGSLRR GGTA ASR
Sbjct: 451 VLQLGRTRSC*GDPRMPVRR*GTSARLLVCRTATPSPMCAPRVGSLRRLVVGGTAVASRF 630
Query: 634 KWP 642
K P
Sbjct: 631 KLP 639
Score = 41.8 bits (85), Expect(3) = 1e-027
Identities = 16/25 (64%), Positives = 17/25 (68%)
Frame = -2 / -1
Query: 591 QTSYPSSEHKAWCGCEALLVQARSA 517
QTSYP S H+AWCGC A RSA
Sbjct: 588 QTSYPWSAHRAWCGCAAHQEPCRSA 514
Score = 41.4 bits (84), Expect(3) = 2e-060
Identities = 14/21 (66%), Positives = 15/21 (71%)
Frame = -2 / -1
Query: 132 TWAPCAWSSCCGRRLRDRYPW 70
TWA AWSSC R+ R RYPW
Sbjct: 126 TWARRAWSSCSSRQRRGRYPW 64
Score = 35.4 bits (71), Expect(4) = 2e-034
Identities = 15/36 (41%), Positives = 19/36 (52%)
Frame = +2 / +2
Query: 188 DKEQLQRRDPQAPLHEXXXXXXXXXXXXRQVHGGEG 295
D+EQ+QRR PQ LHE Q+H G+G
Sbjct: 182 DQEQVQRRHPQEALHEQDQPPAALHAPSLQLHEGKG 289
Score = 30.4 bits (60), Expect(4) = 2e-034
Identities = 13/23 (56%), Positives = 14/23 (60%)
Frame = +2 / +2
Query: 71 HGYXXXXXXPQQEDQAHGAQVRR 139
HGY +QEDQA AQVRR
Sbjct: 65 HGYRPRRWREEQEDQARRAQVRR 133
Score = 26.7 bits (52), Expect(3) = 1e-027
Identities = 17/37 (45%), Positives = 18/37 (48%)
Frame = -2 / -1
Query: 489 PSAEPCFAQVGHXXXXXXXXGTLRQH**SWPSLSQ*T 379
PS C Q+ H GT QH* S PSLS *T
Sbjct: 486 PSTGSCSPQLEHGEQAGQK*GTPHQH*QSLPSLSL*T 376
>gb|AL506939.1|AL506939 AL506939 Hordeum vulgare Barke developing caryopsis (3.-15.DAP)
Hordeum vulgare subsp. vulgare cDNA clone HY04L02T 5',
mRNA sequence
Length = 700
Score = 248 bits (535), Expect(2) = e-107
Identities = 102/113 (90%), Positives = 108/113 (95%)
Frame = +3 / +1
Query: 303 IAVIVGTVTDDKRISEVPAMKVCALRFTETARARIINAGGECLTFDQLALRAPLGQNTVL 482
IAV+VGT+TDD RI E+PAMKV ALRFTETARARI+NAGGECLTFDQLALRAP G+NT+L
Sbjct: 301 IAVVVGTITDDMRIQEIPAMKVTALRFTETARARIVNAGGECLTFDQLALRAPTGENTIL 480
Query: 483 LRGPKNAREAVRHFGPAPGVPHSHTKPYVRSKGRKFEKARGRRNSRGFKV*VA 641
LRGPKNAREAVRHFG APGVPHSHTKPYVRSKGRKFEKARGRRNSRGFKV*VA
Sbjct: 481 LRGPKNAREAVRHFGKAPGVPHSHTKPYVRSKGRKFEKARGRRNSRGFKV*VA 639
Score = 162 bits (349), Expect(2) = e-107
Identities = 70/83 (84%), Positives = 75/83 (90%)
Frame = +3 / +1
Query: 69 AMGIDLVAGGRNKKTKRTAPKSDDVYLKLLVKLYRFLVRRTKSNFNAVILKRLFMSKTNR 248
AMGIDLVAGGRNK+TKR APKSDDVYLKLLVKLYRFLVRRTKS FNAVILKRLFMSKTNR
Sbjct: 64 AMGIDLVAGGRNKRTKRVAPKSDDVYLKLLVKLYRFLVRRTKSKFNAVILKRLFMSKTNR 243
Query: 249 PPLSMRRLVRFMEGKGDQIAVIV 317
PPLSMRRL FM+GK ++ +V
Sbjct: 244 PPLSMRRLSNFMKGKEEKNIAVV 312
Score = 160 bits (344), Expect(3) = 2e-060
Identities = 73/91 (80%), Positives = 76/91 (83%)
Frame = -1 / -3
Query: 574 ERT*GLVWL*GTPGAGPKCLTASLAFLGPLSRTVFCPSGARSASWSKVRHSPPALMILAL 395
ERT*GLVWL GTPGA PKCLTAS AFLGPL+R VF P GAR ASWSKVRHSPPAL ILAL
Sbjct: 572 ERT*GLVWLCGTPGALPKCLTASRAFLGPLNRIVFSPVGARRASWSKVRHSPPALTILAL 393
Query: 394 AVSVNLSAQTFIAGTSLILLSSVTVPTITAI 302
AVSVNL A TFIAG S I +SSV VPT TA+
Sbjct: 392 AVSVNLRAVTFIAGISWIRMSSVIVPTTTAM 300
Score = 146 bits (314), Expect = 1e-034
Identities = 64/117 (54%), Positives = 83/117 (70%)
Frame = -3 / -2
Query: 641 GHLDLEAPAVPPSSRLLKLPTLRANIRLGVAVRHSWCRPEVPDSFPSVLRTPQQNRVLPK 462
G+L+LEA AVPP++ LLKLPTL A+I LGVAVRH+ EVP +L +PQQ+RVLP
Sbjct: 639 GNLNLEATAVPPTTSLLKLPTLGAHIGLGVAVRHTRSLAEVPHRLTGILGSPQQDRVLPS 460
Query: 461 WGTERELVEGEALSASIDDPGPRCLSEPERADLHRRHLADPLVVGHGAHNHGDLITL 291
W TE +LV+ EAL SID+P PRCL EP+ +LH L DP V+ A+NH +++ L
Sbjct: 459 WSTESKLVKSEALPTSIDNPCPRCLCEPQSGNLHCWDLLDPHVICDCANNHSNVLLL 289
Score = 92.7 bits (196), Expect(3) = 1e-027
Identities = 48/89 (53%), Positives = 51/89 (57%)
Frame = -1 / -3
Query: 334 SSVTVPTITAI*SPFPSMNLTRRRIESGGRLVLLMKRRLRITALKLLFVXXXXXXXXXXX 155
S + T S FP M L RRR+ESGGRLVLLMK LR+TAL LL V
Sbjct: 329 SVIVPTTTAMFFSSFPFMKLERRRMESGGRLVLLMKSLLRMTALNLLLVLLTRKR*SLTR 150
Query: 154 XXXXXXSDLGAVRLVFLLRPPATRSIPMA 68
SDLGA RLV L PPATRSIPMA
Sbjct: 149 SLRYTSSDLGATRLVLLFLPPATRSIPMA 63
Score = 73.0 bits (153), Expect(4) = 2e-034
Identities = 27/54 (50%), Positives = 33/54 (61%)
Frame = +2 / +3
Query: 314 CGHRDRRQEDQRGAGDEGLRAQVH*DSEGQDHQCWRRVPHLRPARAPCPTWAKH 475
C H R D R +EG R++VH DSEG+D QCW VPH PA +PC W +H
Sbjct: 312 CWHNHR*HADPRDPSNEGYRSEVHRDSEGKDCQCWWGVPHF*PACSPCSNWGEH 473
Score = 69.8 bits (146), Expect(3) = 2e-060
Identities = 30/43 (69%), Positives = 33/43 (76%)
Frame = -3 / -2
Query: 302 LITLPLHEPDEAAHRERRAVGLAHEEALEDHGVEVALCPAHKE 174
L+ L LHE E AH ERRAVGLAHEE LED GVE+AL P H+E
Sbjct: 297 LLLLSLHEVGETAHGERRAVGLAHEEPLEDDGVELALGPPHQE 169
Score = 62.9 bits (131), Expect(4) = 2e-034
Identities = 36/63 (57%), Positives = 38/63 (60%)
Frame = +1 / +2
Query: 454 VPHLGKTRFC*GVLRTLGKLSGTSGLHQECLTATPSLMFARRVGSLRRREEGGTAGASRS 633
V LG+TR C*G R + GTS C TATPS M A RVGSLRR GGTA ASR
Sbjct: 452 VLQLGRTRSC*GDPRMPVRR*GTSARLLVCRTATPSPMCAPRVGSLRRLVVGGTAVASRF 631
Query: 634 KWP 642
K P
Sbjct: 632 KLP 640
Score = 41.8 bits (85), Expect(3) = 1e-027
Identities = 16/25 (64%), Positives = 17/25 (68%)
Frame = -2 / -1
Query: 591 QTSYPSSEHKAWCGCEALLVQARSA 517
QTSYP S H+AWCGC A RSA
Sbjct: 589 QTSYPWSAHRAWCGCAAHQEPCRSA 515
Score = 41.4 bits (84), Expect(3) = 2e-060
Identities = 14/21 (66%), Positives = 15/21 (71%)
Frame = -2 / -1
Query: 132 TWAPCAWSSCCGRRLRDRYPW 70
TWA AWSSC R+ R RYPW
Sbjct: 127 TWARRAWSSCSSRQRRGRYPW 65
Score = 35.4 bits (71), Expect(4) = 2e-034
Identities = 15/36 (41%), Positives = 19/36 (52%)
Frame = +2 / +3
Query: 188 DKEQLQRRDPQAPLHEXXXXXXXXXXXXRQVHGGEG 295
D+EQ+QRR PQ LHE Q+H G+G
Sbjct: 183 DQEQVQRRHPQEALHEQDQPPAALHAPSLQLHEGKG 290
Score = 30.4 bits (60), Expect(4) = 2e-034
Identities = 13/23 (56%), Positives = 14/23 (60%)
Frame = +2 / +3
Query: 71 HGYXXXXXXPQQEDQAHGAQVRR 139
HGY +QEDQA AQVRR
Sbjct: 66 HGYRPRRWREEQEDQARRAQVRR 134
Score = 26.7 bits (52), Expect(3) = 1e-027
Identities = 17/37 (45%), Positives = 18/37 (48%)
Frame = -2 / -1
Query: 489 PSAEPCFAQVGHXXXXXXXXGTLRQH**SWPSLSQ*T 379
PS C Q+ H GT QH* S PSLS *T
Sbjct: 487 PSTGSCSPQLEHGEQAGQK*GTPHQH*QSLPSLSL*T 377
>gb|AV919247.1|AV919247 AV919247 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags5c24 3', mRNA sequence
Length = 698
Score = 248 bits (535), Expect(2) = e-107
Identities = 102/113 (90%), Positives = 108/113 (95%)
Frame = +3 / -3
Query: 303 IAVIVGTVTDDKRISEVPAMKVCALRFTETARARIINAGGECLTFDQLALRAPLGQNTVL 482
IAV+VGT+TDD RI E+PAMKV ALRFTETARARI+NAGGECLTFDQLALRAP G+NT+L
Sbjct: 447 IAVVVGTITDDMRIQEIPAMKVTALRFTETARARIVNAGGECLTFDQLALRAPTGENTIL 268
Query: 483 LRGPKNAREAVRHFGPAPGVPHSHTKPYVRSKGRKFEKARGRRNSRGFKV*VA 641
LRGPKNAREAVRHFG APGVPHSHTKPYVRSKGRKFEKARGRRNSRGFKV*VA
Sbjct: 267 LRGPKNAREAVRHFGKAPGVPHSHTKPYVRSKGRKFEKARGRRNSRGFKV*VA 109
Score = 162 bits (349), Expect(2) = e-107
Identities = 70/83 (84%), Positives = 75/83 (90%)
Frame = +3 / -3
Query: 69 AMGIDLVAGGRNKKTKRTAPKSDDVYLKLLVKLYRFLVRRTKSNFNAVILKRLFMSKTNR 248
AMGIDLVAGGRNK+TKR APKSDDVYLKLLVKLYRFLVRRTKS FNAVILKRLFMSKTNR
Sbjct: 684 AMGIDLVAGGRNKRTKRVAPKSDDVYLKLLVKLYRFLVRRTKSKFNAVILKRLFMSKTNR 505
Query: 249 PPLSMRRLVRFMEGKGDQIAVIV 317
PPLSMRRL FM+GK ++ +V
Sbjct: 504 PPLSMRRLSNFMKGKEEKNIAVV 436
Score = 160 bits (344), Expect(3) = 3e-060
Identities = 73/91 (80%), Positives = 76/91 (83%)
Frame = -1 / +2
Query: 574 ERT*GLVWL*GTPGAGPKCLTASLAFLGPLSRTVFCPSGARSASWSKVRHSPPALMILAL 395
ERT*GLVWL GTPGA PKCLTAS AFLGPL+R VF P GAR ASWSKVRHSPPAL ILAL
Sbjct: 176 ERT*GLVWLCGTPGALPKCLTASRAFLGPLNRIVFSPVGARRASWSKVRHSPPALTILAL 355
Query: 394 AVSVNLSAQTFIAGTSLILLSSVTVPTITAI 302
AVSVNL A TFIAG S I +SSV VPT TA+
Sbjct: 356 AVSVNLRAVTFIAGISWIRMSSVIVPTTTAM 448
Score = 146 bits (314), Expect = 1e-034
Identities = 64/117 (54%), Positives = 83/117 (70%)
Frame = -3 / +1
Query: 641 GHLDLEAPAVPPSSRLLKLPTLRANIRLGVAVRHSWCRPEVPDSFPSVLRTPQQNRVLPK 462
G+L+LEA AVPP++ LLKLPTL A+I LGVAVRH+ EVP +L +PQQ+RVLP
Sbjct: 109 GNLNLEATAVPPTTSLLKLPTLGAHIGLGVAVRHTRSLAEVPHRLTGILGSPQQDRVLPS 288
Query: 461 WGTERELVEGEALSASIDDPGPRCLSEPERADLHRRHLADPLVVGHGAHNHGDLITL 291
W TE +LV+ EAL SID+P PRCL EP+ +LH L DP V+ A+NH +++ L
Sbjct: 289 WSTESKLVKSEALPTSIDNPCPRCLCEPQSGNLHCWDLLDPHVICDCANNHSNVLLL 459
Score = 92.7 bits (196), Expect(3) = 1e-027
Identities = 48/89 (53%), Positives = 51/89 (57%)
Frame = -1 / +2
Query: 334 SSVTVPTITAI*SPFPSMNLTRRRIESGGRLVLLMKRRLRITALKLLFVXXXXXXXXXXX 155
S + T S FP M L RRR+ESGGRLVLLMK LR+TAL LL V
Sbjct: 419 SVIVPTTTAMFFSSFPFMKLERRRMESGGRLVLLMKSLLRMTALNLLLVLLTRKR*SLTR 598
Query: 154 XXXXXXSDLGAVRLVFLLRPPATRSIPMA 68
SDLGA RLV L PPATRSIPMA
Sbjct: 599 SLRYTSSDLGATRLVLLFLPPATRSIPMA 685
Score = 73.0 bits (153), Expect(4) = 2e-034
Identities = 27/54 (50%), Positives = 33/54 (61%)
Frame = +2 / -2
Query: 314 CGHRDRRQEDQRGAGDEGLRAQVH*DSEGQDHQCWRRVPHLRPARAPCPTWAKH 475
C H R D R +EG R++VH DSEG+D QCW VPH PA +PC W +H
Sbjct: 436 CWHNHR*HADPRDPSNEGYRSEVHRDSEGKDCQCWWGVPHF*PACSPCSNWGEH 275
Score = 69.8 bits (146), Expect(3) = 3e-060
Identities = 30/43 (69%), Positives = 33/43 (76%)
Frame = -3 / +1
Query: 302 LITLPLHEPDEAAHRERRAVGLAHEEALEDHGVEVALCPAHKE 174
L+ L LHE E AH ERRAVGLAHEE LED GVE+AL P H+E
Sbjct: 451 LLLLSLHEVGETAHGERRAVGLAHEEPLEDDGVELALGPPHQE 579
Score = 62.9 bits (131), Expect(4) = 2e-034
Identities = 36/63 (57%), Positives = 38/63 (60%)
Frame = +1 / -1
Query: 454 VPHLGKTRFC*GVLRTLGKLSGTSGLHQECLTATPSLMFARRVGSLRRREEGGTAGASRS 633
V LG+TR C*G R + GTS C TATPS M A RVGSLRR GGTA ASR
Sbjct: 296 VLQLGRTRSC*GDPRMPVRR*GTSARLLVCRTATPSPMCAPRVGSLRRLVVGGTAVASRF 117
Query: 634 KWP 642
K P
Sbjct: 116 KLP 108
Score = 41.8 bits (85), Expect(3) = 1e-027
Identities = 16/25 (64%), Positives = 17/25 (68%)
Frame = -2 / +3
Query: 591 QTSYPSSEHKAWCGCEALLVQARSA 517
QTSYP S H+AWCGC A RSA
Sbjct: 159 QTSYPWSAHRAWCGCAAHQEPCRSA 233
Score = 40.9 bits (83), Expect(3) = 3e-060
Identities = 14/21 (66%), Positives = 15/21 (71%)
Frame = -2 / +3
Query: 132 TWAPCAWSSCCGRRLRDRYPW 70
TWA AWSSC R+ R RYPW
Sbjct: 621 TWARRAWSSCSXRQRRGRYPW 683
Score = 35.4 bits (71), Expect(4) = 2e-034
Identities = 15/36 (41%), Positives = 19/36 (52%)
Frame = +2 / -2
Query: 188 DKEQLQRRDPQAPLHEXXXXXXXXXXXXRQVHGGEG 295
D+EQ+QRR PQ LHE Q+H G+G
Sbjct: 565 DQEQVQRRHPQEALHEQDQPPAALHAPSLQLHEGKG 458
Score = 29.9 bits (59), Expect(4) = 2e-034
Identities = 13/23 (56%), Positives = 14/23 (60%)
Frame = +2 / -2
Query: 71 HGYXXXXXXPQQEDQAHGAQVRR 139
HGY +QEDQA AQVRR
Sbjct: 682 HGYRPRRWRXEQEDQARRAQVRR 614
Score = 26.7 bits (52), Expect(3) = 1e-027
Identities = 17/37 (45%), Positives = 18/37 (48%)
Frame = -2 / +3
Query: 489 PSAEPCFAQVGHXXXXXXXXGTLRQH**SWPSLSQ*T 379
PS C Q+ H GT QH* S PSLS *T
Sbjct: 261 PSTGSCSPQLEHGEQAGQK*GTPHQH*QSLPSLSL*T 371
>gb|BQ764842.1|BQ764842 EBca01_SQ005_F02_R carpel, pre-anthesis, no treatment, cv Optic,
EBca01 Hordeum vulgare subsp. vulgare cDNA clone
EBca01_SQ005_F02 5', mRNA sequence
Length = 698
Score = 248 bits (535), Expect(2) = e-107
Identities = 102/113 (90%), Positives = 108/113 (95%)
Frame = +3 / +2
Query: 303 IAVIVGTVTDDKRISEVPAMKVCALRFTETARARIINAGGECLTFDQLALRAPLGQNTVL 482
IAV+VGT+TDD RI E+PAMKV ALRFTETARARI+NAGGECLTFDQLALRAP G+NT+L
Sbjct: 311 IAVVVGTITDDMRIQEIPAMKVTALRFTETARARIVNAGGECLTFDQLALRAPTGENTIL 490
Query: 483 LRGPKNAREAVRHFGPAPGVPHSHTKPYVRSKGRKFEKARGRRNSRGFKV*VA 641
LRGPKNAREAVRHFG APGVPHSHTKPYVRSKGRKFEKARGRRNSRGFKV*VA
Sbjct: 491 LRGPKNAREAVRHFGKAPGVPHSHTKPYVRSKGRKFEKARGRRNSRGFKV*VA 649
Score = 162 bits (349), Expect(2) = e-107
Identities = 70/83 (84%), Positives = 75/83 (90%)
Frame = +3 / +2
Query: 69 AMGIDLVAGGRNKKTKRTAPKSDDVYLKLLVKLYRFLVRRTKSNFNAVILKRLFMSKTNR 248
AMGIDLVAGGRNK+TKR APKSDDVYLKLLVKLYRFLVRRTKS FNAVILKRLFMSKTNR
Sbjct: 74 AMGIDLVAGGRNKRTKRVAPKSDDVYLKLLVKLYRFLVRRTKSKFNAVILKRLFMSKTNR 253
Query: 249 PPLSMRRLVRFMEGKGDQIAVIV 317
PPLSMRRL FM+GK ++ +V
Sbjct: 254 PPLSMRRLSNFMKGKEEKNIAVV 322
Score = 160 bits (344), Expect(3) = 2e-060
Identities = 73/91 (80%), Positives = 76/91 (83%)
Frame = -1 / -3
Query: 574 ERT*GLVWL*GTPGAGPKCLTASLAFLGPLSRTVFCPSGARSASWSKVRHSPPALMILAL 395
ERT*GLVWL GTPGA PKCLTAS AFLGPL+R VF P GAR ASWSKVRHSPPAL ILAL
Sbjct: 582 ERT*GLVWLCGTPGALPKCLTASRAFLGPLNRIVFSPVGARRASWSKVRHSPPALTILAL 403
Query: 394 AVSVNLSAQTFIAGTSLILLSSVTVPTITAI 302
AVSVNL A TFIAG S I +SSV VPT TA+
Sbjct: 402 AVSVNLRAVTFIAGISWIRMSSVIVPTTTAM 310
Score = 146 bits (314), Expect = 1e-034
Identities = 64/117 (54%), Positives = 83/117 (70%)
Frame = -3 / -2
Query: 641 GHLDLEAPAVPPSSRLLKLPTLRANIRLGVAVRHSWCRPEVPDSFPSVLRTPQQNRVLPK 462
G+L+LEA AVPP++ LLKLPTL A+I LGVAVRH+ EVP +L +PQQ+RVLP
Sbjct: 649 GNLNLEATAVPPTTSLLKLPTLGAHIGLGVAVRHTRSLAEVPHRLTGILGSPQQDRVLPS 470
Query: 461 WGTERELVEGEALSASIDDPGPRCLSEPERADLHRRHLADPLVVGHGAHNHGDLITL 291
W TE +LV+ EAL SID+P PRCL EP+ +LH L DP V+ A+NH +++ L
Sbjct: 469 WSTESKLVKSEALPTSIDNPCPRCLCEPQSGNLHCWDLLDPHVICDCANNHSNVLLL 299
Score = 92.7 bits (196), Expect(3) = 1e-027
Identities = 48/89 (53%), Positives = 51/89 (57%)
Frame = -1 / -3
Query: 334 SSVTVPTITAI*SPFPSMNLTRRRIESGGRLVLLMKRRLRITALKLLFVXXXXXXXXXXX 155
S + T S FP M L RRR+ESGGRLVLLMK LR+TAL LL V
Sbjct: 339 SVIVPTTTAMFFSSFPFMKLERRRMESGGRLVLLMKSLLRMTALNLLLVLLTRKR*SLTR 160
Query: 154 XXXXXXSDLGAVRLVFLLRPPATRSIPMA 68
SDLGA RLV L PPATRSIPMA
Sbjct: 159 SLRYTSSDLGATRLVLLFLPPATRSIPMA 73
Score = 73.0 bits (153), Expect(4) = 2e-034
Identities = 27/54 (50%), Positives = 33/54 (61%)
Frame = +2 / +1
Query: 314 CGHRDRRQEDQRGAGDEGLRAQVH*DSEGQDHQCWRRVPHLRPARAPCPTWAKH 475
C H R D R +EG R++VH DSEG+D QCW VPH PA +PC W +H
Sbjct: 322 CWHNHR*HADPRDPSNEGYRSEVHRDSEGKDCQCWWGVPHF*PACSPCSNWGEH 483
Score = 69.8 bits (146), Expect(3) = 2e-060
Identities = 30/43 (69%), Positives = 33/43 (76%)
Frame = -3 / -2
Query: 302 LITLPLHEPDEAAHRERRAVGLAHEEALEDHGVEVALCPAHKE 174
L+ L LHE E AH ERRAVGLAHEE LED GVE+AL P H+E
Sbjct: 307 LLLLSLHEVGETAHGERRAVGLAHEEPLEDDGVELALGPPHQE 179
Score = 62.9 bits (131), Expect(4) = 2e-034
Identities = 36/63 (57%), Positives = 38/63 (60%)
Frame = +1 / +3
Query: 454 VPHLGKTRFC*GVLRTLGKLSGTSGLHQECLTATPSLMFARRVGSLRRREEGGTAGASRS 633
V LG+TR C*G R + GTS C TATPS M A RVGSLRR GGTA ASR
Sbjct: 462 VLQLGRTRSC*GDPRMPVRR*GTSARLLVCRTATPSPMCAPRVGSLRRLVVGGTAVASRF 641
Query: 634 KWP 642
K P
Sbjct: 642 KLP 650
Score = 41.8 bits (85), Expect(3) = 1e-027
Identities = 16/25 (64%), Positives = 17/25 (68%)
Frame = -2 / -1
Query: 591 QTSYPSSEHKAWCGCEALLVQARSA 517
QTSYP S H+AWCGC A RSA
Sbjct: 599 QTSYPWSAHRAWCGCAAHQEPCRSA 525
Score = 41.4 bits (84), Expect(3) = 2e-060
Identities = 14/21 (66%), Positives = 15/21 (71%)
Frame = -2 / -1
Query: 132 TWAPCAWSSCCGRRLRDRYPW 70
TWA AWSSC R+ R RYPW
Sbjct: 137 TWARRAWSSCSSRQRRGRYPW 75
Score = 35.4 bits (71), Expect(4) = 2e-034
Identities = 15/36 (41%), Positives = 19/36 (52%)
Frame = +2 / +1
Query: 188 DKEQLQRRDPQAPLHEXXXXXXXXXXXXRQVHGGEG 295
D+EQ+QRR PQ LHE Q+H G+G
Sbjct: 193 DQEQVQRRHPQEALHEQDQPPAALHAPSLQLHEGKG 300
Score = 30.4 bits (60), Expect(4) = 2e-034
Identities = 13/23 (56%), Positives = 14/23 (60%)
Frame = +2 / +1
Query: 71 HGYXXXXXXPQQEDQAHGAQVRR 139
HGY +QEDQA AQVRR
Sbjct: 76 HGYRPRRWREEQEDQARRAQVRR 144
Score = 26.7 bits (52), Expect(3) = 1e-027
Identities = 17/37 (45%), Positives = 18/37 (48%)
Frame = -2 / -1
Query: 489 PSAEPCFAQVGHXXXXXXXXGTLRQH**SWPSLSQ*T 379
PS C Q+ H GT QH* S PSLS *T
Sbjct: 497 PSTGSCSPQLEHGEQAGQK*GTPHQH*QSLPSLSL*T 387
>gb|BQ469660.1|BQ469660 HZ01H18r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ01H18
5-PRIME, mRNA sequence
Length = 574
Score = 386 bits (838), Expect = e-107
Identities = 161/177 (90%), Positives = 170/177 (96%)
Frame = +3 / +2
Query: 60 HRTAMGIDLVAGGRNKKTKRTAPKSDDVYLKLLVKLYRFLVRRTKSNFNAVILKRLFMSK 239
HR MGIDLVAGGRNK+TKRTAPKSDDVYLKLLVKLYRFLVRRTKS FNAVILKRLFMSK
Sbjct: 44 HRGTMGIDLVAGGRNKRTKRTAPKSDDVYLKLLVKLYRFLVRRTKSQFNAVILKRLFMSK 223
Query: 240 TNRPPLSMRRLVRFMEGKGDQIAVIVGTVTDDKRISEVPAMKVCALRFTETARARIINAG 419
TNRPPLSMRRLVRFM+GK D+IAVIVGT+TDD+R+ E+PAMKV ALRFTETARARI+NAG
Sbjct: 224 TNRPPLSMRRLVRFMDGKADKIAVIVGTITDDQRVYEIPAMKVAALRFTETARARIVNAG 403
Query: 420 GECLTFDQLALRAPLGQNTVLLRGPKNAREAVRHFGPAPGVPHSHTKPYVRSKGRKF 590
GECLTFDQLALRAPLGQNT+LLRGPKNAREAVRHFG APGVPHSHTKPYVRSKGRKF
Sbjct: 404 GECLTFDQLALRAPLGQNTLLLRGPKNAREAVRHFGKAPGVPHSHTKPYVRSKGRKF 574
Score = 287 bits (621), Expect = 6e-077
Identities = 135/184 (73%), Positives = 139/184 (75%)
Frame = -1 / -2
Query: 574 ERT*GLVWL*GTPGAGPKCLTASLAFLGPLSRTVFCPSGARSASWSKVRHSPPALMILAL 395
ERT GLVWL GTPGA PKCLTASLAFLGPL R+VFCPSGAR ASWSKVRHSPPAL ILAL
Sbjct: 558 ERTYGLVWLCGTPGALPKCLTASLAFLGPLRRSVFCPSGARRASWSKVRHSPPALTILAL 379
Query: 394 AVSVNLSAQTFIAGTSLILLSSVTVPTITAI*SPFPSMNLTRRRIESGGRLVLLMKRRLR 215
AVSVNLSA TFIAG S L SSV VPTITAI S FPSMNLTRRRIESGGR VLLMK R R
Sbjct: 378 AVSVNLSAATFIAGIS*TLWSSVMVPTITAILSAFPSMNLTRRRIESGGRFVLLMKSRFR 199
Query: 214 ITALKLLFVXXXXXXXXXXXXXXXXXSDLGAVRLVFLLRPPATRSIPMAVRWRLQRRQDG 35
ITAL L V SDLGAVRLV LLRPPATRSIPM RW +Q+R+
Sbjct: 198 ITALNWLLVLRTRKR*SLTSSLRYTSSDLGAVRLVLLLRPPATRSIPMVPRWWMQQRRGS 19
Query: 34 RGAR 23
R R
Sbjct: 18 RRQR 7
Score = 222 bits (479), Expect(2) = 3e-069
Identities = 92/140 (65%), Positives = 110/140 (78%)
Frame = -3 / -1
Query: 590 KLPTLRANIRLGVAVRHSWCRPEVPDSFPSVLRTPQQNRVLPKWGTERELVEGEALSASI 411
+ P L A+I LGVAV HSW +VP+SFP VL TPQ+ RVL K TE ELV+G+AL+ S+
Sbjct: 574 EFPALGADIWLGVAVWHSWSFAKVPNSFPGVLGTPQEKRVLSKRSTEGELVKGKALATSV 395
Query: 410 DDPGPRCLSEPERADLHRRHLADPLVVGHGAHNHGDLITLPLHEPDEAAHRERRAVGLAH 231
D+PGPR L EPER LH R+L DPLV+G GAH+H DL+ LP+HEPDEAAHRERR V LAH
Sbjct: 394 DNPGPRRLGEPERGHLHCRYLVDPLVIGDGAHDHSDLVRLPIHEPDEAAHRERRPVCLAH 215
Query: 230 EEALEDHGVEVALCPAHKEA 171
EE L+DHGVE+AL P H+EA
Sbjct: 214 EEPLQDHGVELALGPPHQEA 155
Score = 143 bits (307), Expect(2) = 1e-039
Identities = 64/127 (50%), Positives = 73/127 (57%)
Frame = +2 / +1
Query: 188 DKEQLQRRDPQAPLHEXXXXXXXXXXXXRQVHGGEG*SDRRDCGHRDRRQEDQRGAGDEG 367
D+E +QRRDP+A LHE RQVHG EG DR D GH R E R G+EG
Sbjct: 172 DQEPVQRRDPEAALHEQDKPAAALDAPPRQVHGWEGGQDRCDRGHHHR*PEGLRDTGNEG 351
Query: 368 LRAQVH*DSEGQDHQCWRRVPHLRPARAPCPTWAKHXXXXXXXXXXXXCQALRACTRSAS 547
RAQVH D EGQD Q W RVP+L PAR PC W +H C AL +RSA+
Sbjct: 352 GRAQVHRDGEGQDCQRWWRVPYL*PARPPCSAWTEHASPEGSQERQGSC*ALWQSSRSAT 531
Query: 548 QPHQALC 568
QPHQA+C
Sbjct: 532 QPHQAIC 552
Score = 60.2 bits (125), Expect(2) = 3e-069
Identities = 19/21 (90%), Positives = 19/21 (90%)
Frame = -2 / -3
Query: 132 TWAPCAWSSCCGRRLRDRYPW 70
TWAPCAWSSCCGRR R RYPW
Sbjct: 116 TWAPCAWSSCCGRRRRGRYPW 54
Score = 40.0 bits (81), Expect(2) = 1e-039
Identities = 16/23 (69%), Positives = 16/23 (69%)
Frame = +2 / +1
Query: 71 HGYXXXXXXPQQEDQAHGAQVRR 139
HGY PQQEDQAHGAQV R
Sbjct: 55 HGYRPRRRRPQQEDQAHGAQVGR 123
>gb|CA018031.1|CA018031 HV07D06r HV Hordeum vulgare subsp. vulgare cDNA clone HV07D06
5-PRIME, mRNA sequence
Length = 580
Score = 386 bits (838), Expect = e-107
Identities = 161/177 (90%), Positives = 170/177 (96%)
Frame = +3 / +1
Query: 60 HRTAMGIDLVAGGRNKKTKRTAPKSDDVYLKLLVKLYRFLVRRTKSNFNAVILKRLFMSK 239
HR MGIDLVAGGRNK+TKRTAPKSDDVYLKLLVKLYRFLVRRTKS FNAVILKRLFMSK
Sbjct: 49 HRGTMGIDLVAGGRNKRTKRTAPKSDDVYLKLLVKLYRFLVRRTKSQFNAVILKRLFMSK 228
Query: 240 TNRPPLSMRRLVRFMEGKGDQIAVIVGTVTDDKRISEVPAMKVCALRFTETARARIINAG 419
TNRPPLSMRRLVRFM+GK D+IAVIVGT+TDD+R+ E+PAMKV ALRFTETARARI+NAG
Sbjct: 229 TNRPPLSMRRLVRFMDGKADKIAVIVGTITDDQRVYEIPAMKVAALRFTETARARIVNAG 408
Query: 420 GECLTFDQLALRAPLGQNTVLLRGPKNAREAVRHFGPAPGVPHSHTKPYVRSKGRKF 590
GECLTFDQLALRAPLGQNT+LLRGPKNAREAVRHFG APGVPHSHTKPYVRSKGRKF
Sbjct: 409 GECLTFDQLALRAPLGQNTLLLRGPKNAREAVRHFGKAPGVPHSHTKPYVRSKGRKF 579
Score = 287 bits (621), Expect = 6e-077
Identities = 135/184 (73%), Positives = 139/184 (75%)
Frame = -1 / -3
Query: 574 ERT*GLVWL*GTPGAGPKCLTASLAFLGPLSRTVFCPSGARSASWSKVRHSPPALMILAL 395
ERT GLVWL GTPGA PKCLTASLAFLGPL R+VFCPSGAR ASWSKVRHSPPAL ILAL
Sbjct: 563 ERTYGLVWLCGTPGALPKCLTASLAFLGPLRRSVFCPSGARRASWSKVRHSPPALTILAL 384
Query: 394 AVSVNLSAQTFIAGTSLILLSSVTVPTITAI*SPFPSMNLTRRRIESGGRLVLLMKRRLR 215
AVSVNLSA TFIAG S L SSV VPTITAI S FPSMNLTRRRIESGGR VLLMK R R
Sbjct: 383 AVSVNLSAATFIAGIS*TLWSSVMVPTITAILSAFPSMNLTRRRIESGGRFVLLMKSRFR 204
Query: 214 ITALKLLFVXXXXXXXXXXXXXXXXXSDLGAVRLVFLLRPPATRSIPMAVRWRLQRRQDG 35
ITAL L V SDLGAVRLV LLRPPATRSIPM RW +Q+R+
Sbjct: 203 ITALNWLLVLRTRKR*SLTSSLRYTSSDLGAVRLVLLLRPPATRSIPMVPRWWMQQRRGS 24
Query: 34 RGAR 23
R R
Sbjct: 23 RRQR 12
Score = 222 bits (479), Expect(2) = 3e-069
Identities = 92/140 (65%), Positives = 110/140 (78%)
Frame = -3 / -2
Query: 590 KLPTLRANIRLGVAVRHSWCRPEVPDSFPSVLRTPQQNRVLPKWGTERELVEGEALSASI 411
+ P L A+I LGVAV HSW +VP+SFP VL TPQ+ RVL K TE ELV+G+AL+ S+
Sbjct: 579 EFPALGADIWLGVAVWHSWSFAKVPNSFPGVLGTPQEKRVLSKRSTEGELVKGKALATSV 400
Query: 410 DDPGPRCLSEPERADLHRRHLADPLVVGHGAHNHGDLITLPLHEPDEAAHRERRAVGLAH 231
D+PGPR L EPER LH R+L DPLV+G GAH+H DL+ LP+HEPDEAAHRERR V LAH
Sbjct: 399 DNPGPRRLGEPERGHLHCRYLVDPLVIGDGAHDHSDLVRLPIHEPDEAAHRERRPVCLAH 220
Query: 230 EEALEDHGVEVALCPAHKEA 171
EE L+DHGVE+AL P H+EA
Sbjct: 219 EEPLQDHGVELALGPPHQEA 160
Score = 143 bits (307), Expect(2) = 1e-039
Identities = 64/127 (50%), Positives = 73/127 (57%)
Frame = +2 / +3
Query: 188 DKEQLQRRDPQAPLHEXXXXXXXXXXXXRQVHGGEG*SDRRDCGHRDRRQEDQRGAGDEG 367
D+E +QRRDP+A LHE RQVHG EG DR D GH R E R G+EG
Sbjct: 177 DQEPVQRRDPEAALHEQDKPAAALDAPPRQVHGWEGGQDRCDRGHHHR*PEGLRDTGNEG 356
Query: 368 LRAQVH*DSEGQDHQCWRRVPHLRPARAPCPTWAKHXXXXXXXXXXXXCQALRACTRSAS 547
RAQVH D EGQD Q W RVP+L PAR PC W +H C AL +RSA+
Sbjct: 357 GRAQVHRDGEGQDCQRWWRVPYL*PARPPCSAWTEHASPEGSQERQGSC*ALWQSSRSAT 536
Query: 548 QPHQALC 568
QPHQA+C
Sbjct: 537 QPHQAIC 557
Score = 60.2 bits (125), Expect(2) = 3e-069
Identities = 19/21 (90%), Positives = 19/21 (90%)
Frame = -2 / -1
Query: 132 TWAPCAWSSCCGRRLRDRYPW 70
TWAPCAWSSCCGRR R RYPW
Sbjct: 121 TWAPCAWSSCCGRRRRGRYPW 59
Score = 40.0 bits (81), Expect(2) = 1e-039
Identities = 16/23 (69%), Positives = 16/23 (69%)
Frame = +2 / +3
Query: 71 HGYXXXXXXPQQEDQAHGAQVRR 139
HGY PQQEDQAHGAQV R
Sbjct: 60 HGYRPRRRRPQQEDQAHGAQVGR 128
>gb|CK122291.1|CK122291 BES1824102m01 BES1824 Hordeum vulgare subsp. vulgare cDNA clone
MPMGp2010M012 5-PRIME, mRNA sequence
Length = 774
Score = 243 bits (526), Expect(2) = e-106
Identities = 99/110 (90%), Positives = 105/110 (95%)
Frame = +3 / +2
Query: 303 IAVIVGTVTDDKRISEVPAMKVCALRFTETARARIINAGGECLTFDQLALRAPLGQNTVL 482
IAV+VGT+TDD RI E+PAMKV ALRFTETARARI+NAGGECLTFDQLALRAP G+NT+L
Sbjct: 308 IAVVVGTITDDMRIQEIPAMKVTALRFTETARARIVNAGGECLTFDQLALRAPTGENTIL 487
Query: 483 LRGPKNAREAVRHFGPAPGVPHSHTKPYVRSKGRKFEKARGRRNSRGFKV 632
LRGPKNAREAVRHFG APGVPHSHTKPYVRSKGRKFEKARGRRNSRGFKV
Sbjct: 488 LRGPKNAREAVRHFGKAPGVPHSHTKPYVRSKGRKFEKARGRRNSRGFKV 637
Score = 162 bits (349), Expect(2) = e-106
Identities = 70/83 (84%), Positives = 75/83 (90%)
Frame = +3 / +2
Query: 69 AMGIDLVAGGRNKKTKRTAPKSDDVYLKLLVKLYRFLVRRTKSNFNAVILKRLFMSKTNR 248
AMGIDLVAGGRNK+TKR APKSDDVYLKLLVKLYRFLVRRTKS FNAVILKRLFMSKTNR
Sbjct: 71 AMGIDLVAGGRNKRTKRVAPKSDDVYLKLLVKLYRFLVRRTKSKFNAVILKRLFMSKTNR 250
Query: 249 PPLSMRRLVRFMEGKGDQIAVIV 317
PPLSMRRL FM+GK ++ +V
Sbjct: 251 PPLSMRRLSNFMKGKEEKNIAVV 319
Score = 160 bits (344), Expect(3) = 2e-060
Identities = 73/91 (80%), Positives = 76/91 (83%)
Frame = -1 / -1
Query: 574 ERT*GLVWL*GTPGAGPKCLTASLAFLGPLSRTVFCPSGARSASWSKVRHSPPALMILAL 395
ERT*GLVWL GTPGA PKCLTAS AFLGPL+R VF P GAR ASWSKVRHSPPAL ILAL
Sbjct: 579 ERT*GLVWLCGTPGALPKCLTASRAFLGPLNRIVFSPVGARRASWSKVRHSPPALTILAL 400
Query: 394 AVSVNLSAQTFIAGTSLILLSSVTVPTITAI 302
AVSVNL A TFIAG S I +SSV VPT TA+
Sbjct: 399 AVSVNLRAVTFIAGISWIRMSSVIVPTTTAM 307
Score = 146 bits (313), Expect = 2e-034
Identities = 64/117 (54%), Positives = 82/117 (70%)
Frame = -3 / -3
Query: 641 GHLDLEAPAVPPSSRLLKLPTLRANIRLGVAVRHSWCRPEVPDSFPSVLRTPQQNRVLPK 462
G L+LEA AVPP++ LLKLPTL A+I LGVAVRH+ EVP +L +PQQ+RVLP
Sbjct: 646 GQLNLEATAVPPTTSLLKLPTLGAHIGLGVAVRHTRSLAEVPHRLTGILGSPQQDRVLPS 467
Query: 461 WGTERELVEGEALSASIDDPGPRCLSEPERADLHRRHLADPLVVGHGAHNHGDLITL 291
W TE +LV+ EAL SID+P PRCL EP+ +LH L DP V+ A+NH +++ L
Sbjct: 466 WSTESKLVKSEALPTSIDNPCPRCLCEPQSGNLHCWDLLDPHVICDCANNHSNVLLL 296
Score = 92.7 bits (196), Expect(3) = 1e-027
Identities = 48/89 (53%), Positives = 51/89 (57%)
Frame = -1 / -1
Query: 334 SSVTVPTITAI*SPFPSMNLTRRRIESGGRLVLLMKRRLRITALKLLFVXXXXXXXXXXX 155
S + T S FP M L RRR+ESGGRLVLLMK LR+TAL LL V
Sbjct: 336 SVIVPTTTAMFFSSFPFMKLERRRMESGGRLVLLMKSLLRMTALNLLLVLLTRKR*SLTR 157
Query: 154 XXXXXXSDLGAVRLVFLLRPPATRSIPMA 68
SDLGA RLV L PPATRSIPMA
Sbjct: 156 SLRYTSSDLGATRLVLLFLPPATRSIPMA 70
Score = 73.0 bits (153), Expect(4) = 8e-034
Identities = 27/54 (50%), Positives = 33/54 (61%)
Frame = +2 / +1
Query: 314 CGHRDRRQEDQRGAGDEGLRAQVH*DSEGQDHQCWRRVPHLRPARAPCPTWAKH 475
C H R D R +EG R++VH DSEG+D QCW VPH PA +PC W +H
Sbjct: 319 CWHNHR*HADPRDPSNEGYRSEVHRDSEGKDCQCWWGVPHF*PACSPCSNWGEH 480
Score = 69.8 bits (146), Expect(3) = 2e-060
Identities = 30/43 (69%), Positives = 33/43 (76%)
Frame = -3 / -3
Query: 302 LITLPLHEPDEAAHRERRAVGLAHEEALEDHGVEVALCPAHKE 174
L+ L LHE E AH ERRAVGLAHEE LED GVE+AL P H+E
Sbjct: 304 LLLLSLHEVGETAHGERRAVGLAHEEPLEDDGVELALGPPHQE 176
Score = 60.6 bits (126), Expect(4) = 8e-034
Identities = 35/63 (55%), Positives = 37/63 (58%)
Frame = +1 / +3
Query: 454 VPHLGKTRFC*GVLRTLGKLSGTSGLHQECLTATPSLMFARRVGSLRRREEGGTAGASRS 633
V LG+TR C*G R + GTS C TATPS M A RVGSLRR GGTA ASR
Sbjct: 459 VLQLGRTRSC*GDPRMPVRR*GTSARLLVCRTATPSPMCAPRVGSLRRLVVGGTAVASRL 638
Query: 634 KWP 642
P
Sbjct: 639 SCP 647
Score = 41.8 bits (85), Expect(3) = 1e-027
Identities = 16/25 (64%), Positives = 17/25 (68%)
Frame = -2 / -2
Query: 591 QTSYPSSEHKAWCGCEALLVQARSA 517
QTSYP S H+AWCGC A RSA
Sbjct: 596 QTSYPWSAHRAWCGCAAHQEPCRSA 522
Score = 41.4 bits (84), Expect(3) = 2e-060
Identities = 14/21 (66%), Positives = 15/21 (71%)
Frame = -2 / -2
Query: 132 TWAPCAWSSCCGRRLRDRYPW 70
TWA AWSSC R+ R RYPW
Sbjct: 134 TWARRAWSSCSSRQRRGRYPW 72
Score = 35.4 bits (71), Expect(4) = 8e-034
Identities = 15/36 (41%), Positives = 19/36 (52%)
Frame = +2 / +1
Query: 188 DKEQLQRRDPQAPLHEXXXXXXXXXXXXRQVHGGEG 295
D+EQ+QRR PQ LHE Q+H G+G
Sbjct: 190 DQEQVQRRHPQEALHEQDQPPAALHAPSLQLHEGKG 297
Score = 30.4 bits (60), Expect(4) = 8e-034
Identities = 13/23 (56%), Positives = 14/23 (60%)
Frame = +2 / +1
Query: 71 HGYXXXXXXPQQEDQAHGAQVRR 139
HGY +QEDQA AQVRR
Sbjct: 73 HGYRPRRWREEQEDQARRAQVRR 141
Score = 26.7 bits (52), Expect(3) = 1e-027
Identities = 17/37 (45%), Positives = 18/37 (48%)
Frame = -2 / -2
Query: 489 PSAEPCFAQVGHXXXXXXXXGTLRQH**SWPSLSQ*T 379
PS C Q+ H GT QH* S PSLS *T
Sbjct: 494 PSTGSCSPQLEHGEQAGQK*GTPHQH*QSLPSLSL*T 384
>gb|CA013022.1|CA013022 HT07C16r HT Hordeum vulgare subsp. vulgare cDNA clone HT07C16
5-PRIME, mRNA sequence
Length = 628
Score = 248 bits (535), Expect(2) = e-106
Identities = 102/113 (90%), Positives = 108/113 (95%)
Frame = +3 / +2
Query: 303 IAVIVGTVTDDKRISEVPAMKVCALRFTETARARIINAGGECLTFDQLALRAPLGQNTVL 482
IAV+VGT+TDD RI E+PAMKV ALRFTETARARI+NAGGECLTFDQLALRAP G+NT+L
Sbjct: 233 IAVVVGTITDDMRIQEIPAMKVTALRFTETARARIVNAGGECLTFDQLALRAPTGENTIL 412
Query: 483 LRGPKNAREAVRHFGPAPGVPHSHTKPYVRSKGRKFEKARGRRNSRGFKV*VA 641
LRGPKNAREAVRHFG APGVPHSHTKPYVRSKGRKFEKARGRRNSRGFKV*VA
Sbjct: 413 LRGPKNAREAVRHFGKAPGVPHSHTKPYVRSKGRKFEKARGRRNSRGFKV*VA 571
Score = 160 bits (344), Expect(3) = 6e-058
Identities = 73/91 (80%), Positives = 76/91 (83%)
Frame = -1 / -2
Query: 574 ERT*GLVWL*GTPGAGPKCLTASLAFLGPLSRTVFCPSGARSASWSKVRHSPPALMILAL 395
ERT*GLVWL GTPGA PKCLTAS AFLGPL+R VF P GAR ASWSKVRHSPPAL ILAL
Sbjct: 504 ERT*GLVWLCGTPGALPKCLTASRAFLGPLNRIVFSPVGARRASWSKVRHSPPALTILAL 325
Query: 394 AVSVNLSAQTFIAGTSLILLSSVTVPTITAI 302
AVSVNL A TFIAG S I +SSV VPT TA+
Sbjct: 324 AVSVNLRAVTFIAGISWIRMSSVIVPTTTAM 232
Score = 158 bits (340), Expect(2) = e-106
Identities = 68/81 (83%), Positives = 73/81 (90%)
Frame = +3 / +2
Query: 75 GIDLVAGGRNKKTKRTAPKSDDVYLKLLVKLYRFLVRRTKSNFNAVILKRLFMSKTNRPP 254
GIDLVAGGRNK+TKR APKSDDVYLKLLVKLYRFLVRRTKS FNAVILKRLFMSKTNRPP
Sbjct: 2 GIDLVAGGRNKRTKRVAPKSDDVYLKLLVKLYRFLVRRTKSKFNAVILKRLFMSKTNRPP 181
Query: 255 LSMRRLVRFMEGKGDQIAVIV 317
LSMRRL FM+GK ++ +V
Sbjct: 182 LSMRRLSNFMKGKEEKNIAVV 244
Score = 146 bits (314), Expect = 1e-034
Identities = 64/117 (54%), Positives = 83/117 (70%)
Frame = -3 / -1
Query: 641 GHLDLEAPAVPPSSRLLKLPTLRANIRLGVAVRHSWCRPEVPDSFPSVLRTPQQNRVLPK 462
G+L+LEA AVPP++ LLKLPTL A+I LGVAVRH+ EVP +L +PQQ+RVLP
Sbjct: 571 GNLNLEATAVPPTTSLLKLPTLGAHIGLGVAVRHTRSLAEVPHRLTGILGSPQQDRVLPS 392
Query: 461 WGTERELVEGEALSASIDDPGPRCLSEPERADLHRRHLADPLVVGHGAHNHGDLITL 291
W TE +LV+ EAL SID+P PRCL EP+ +LH L DP V+ A+NH +++ L
Sbjct: 391 WSTESKLVKSEALPTSIDNPCPRCLCEPQSGNLHCWDLLDPHVICDCANNHSNVLLL 221
Score = 88.6 bits (187), Expect(3) = 2e-026
Identities = 46/87 (52%), Positives = 49/87 (56%)
Frame = -1 / -2
Query: 334 SSVTVPTITAI*SPFPSMNLTRRRIESGGRLVLLMKRRLRITALKLLFVXXXXXXXXXXX 155
S + T S FP M L RRR+ESGGRLVLLMK LR+TAL LL V
Sbjct: 261 SVIVPTTTAMFFSSFPFMKLERRRMESGGRLVLLMKSLLRMTALNLLLVLLTRKR*SLTR 82
Query: 154 XXXXXXSDLGAVRLVFLLRPPATRSIP 74
SDLGA RLV L PPATRSIP
Sbjct: 81 SLRYTSSDLGATRLVLLFLPPATRSIP 1
Score = 73.0 bits (153), Expect(4) = 2e-033
Identities = 27/54 (50%), Positives = 33/54 (61%)
Frame = +2 / +1
Query: 314 CGHRDRRQEDQRGAGDEGLRAQVH*DSEGQDHQCWRRVPHLRPARAPCPTWAKH 475
C H R D R +EG R++VH DSEG+D QCW VPH PA +PC W +H
Sbjct: 244 CWHNHR*HADPRDPSNEGYRSEVHRDSEGKDCQCWWGVPHF*PACSPCSNWGEH 405
Score = 69.8 bits (146), Expect(3) = 6e-058
Identities = 30/43 (69%), Positives = 33/43 (76%)
Frame = -3 / -1
Query: 302 LITLPLHEPDEAAHRERRAVGLAHEEALEDHGVEVALCPAHKE 174
L+ L LHE E AH ERRAVGLAHEE LED GVE+AL P H+E
Sbjct: 229 LLLLSLHEVGETAHGERRAVGLAHEEPLEDDGVELALGPPHQE 101
Score = 62.9 bits (131), Expect(4) = 2e-033
Identities = 36/63 (57%), Positives = 38/63 (60%)
Frame = +1 / +3
Query: 454 VPHLGKTRFC*GVLRTLGKLSGTSGLHQECLTATPSLMFARRVGSLRRREEGGTAGASRS 633
V LG+TR C*G R + GTS C TATPS M A RVGSLRR GGTA ASR
Sbjct: 384 VLQLGRTRSC*GDPRMPVRR*GTSARLLVCRTATPSPMCAPRVGSLRRLVVGGTAVASRF 563
Query: 634 KWP 642
K P
Sbjct: 564 KLP 572
Score = 41.8 bits (85), Expect(3) = 2e-026
Identities = 16/25 (64%), Positives = 17/25 (68%)
Frame = -2 / -3
Query: 591 QTSYPSSEHKAWCGCEALLVQARSA 517
QTSYP S H+AWCGC A RSA
Sbjct: 521 QTSYPWSAHRAWCGCAAHQEPCRSA 447
Score = 35.4 bits (71), Expect(4) = 2e-033
Identities = 15/36 (41%), Positives = 19/36 (52%)
Frame = +2 / +1
Query: 188 DKEQLQRRDPQAPLHEXXXXXXXXXXXXRQVHGGEG 295
D+EQ+QRR PQ LHE Q+H G+G
Sbjct: 115 DQEQVQRRHPQEALHEQDQPPAALHAPSLQLHEGKG 222
Score = 33.1 bits (66), Expect(3) = 6e-058
Identities = 12/19 (63%), Positives = 13/19 (68%)
Frame = -2 / -3
Query: 132 TWAPCAWSSCCGRRLRDRY 76
TWA AWSSC R+ R RY
Sbjct: 59 TWARRAWSSCSSRQRRGRY 3
Score = 26.7 bits (52), Expect(3) = 2e-026
Identities = 17/37 (45%), Positives = 18/37 (48%)
Frame = -2 / -3
Query: 489 PSAEPCFAQVGHXXXXXXXXGTLRQH**SWPSLSQ*T 379
PS C Q+ H GT QH* S PSLS *T
Sbjct: 419 PSTGSCSPQLEHGEQAGQK*GTPHQH*QSLPSLSL*T 309
Score = 26.7 bits (52), Expect(4) = 2e-033
Identities = 12/22 (54%), Positives = 13/22 (59%)
Frame = +2 / +1
Query: 74 GYXXXXXXPQQEDQAHGAQVRR 139
GY +QEDQA AQVRR
Sbjct: 1 GYRPRRWREEQEDQARRAQVRR 66
>gb|AV913597.1|AV913597 AV913597 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags22k10 5', mRNA sequence
Length = 608
Score = 382 bits (829), Expect = e-105
Identities = 163/188 (86%), Positives = 172/188 (91%)
Frame = +3 / +2
Query: 117 RTAPKSDDVYLKLLVKLYRFLVRRTKSNFNAVILKRLFMSKTNRPPLSMRRLVRFMEGKG 296
RTAPKSDDVYLKLLVKLYRFLVRRTKS FNAVILKRLFMSKTNRPPLSMRRLVRFM+GK
Sbjct: 2 RTAPKSDDVYLKLLVKLYRFLVRRTKSQFNAVILKRLFMSKTNRPPLSMRRLVRFMDGKA 181
Query: 297 DQIAVIVGTVTDDKRISEVPAMKVCALRFTETARARIINAGGECLTFDQLALRAPLGQNT 476
D+IAVIVGT+TDD+R+ E+PAMKV ALRFTETARARI+NAGGECLTFDQLALRAPLGQNT
Sbjct: 182 DKIAVIVGTITDDQRVYEIPAMKVAALRFTETARARIVNAGGECLTFDQLALRAPLGQNT 361
Query: 477 VLLRGPKNAREAVRHFGPAPGVPHSHTKPYVRSKGRKFEKARGRRNSRGFKV*VATALPI 656
+LLRGPKNAREAVRHFG APGVPHSHTKPYVRSKGRKFEKARGRRNSRGFKV*
Sbjct: 362 LLLRGPKNAREAVRHFGKAPGVPHSHTKPYVRSKGRKFEKARGRRNSRGFKV*AVEFWAP 541
Query: 657 *CRFARVS 680
CR +S
Sbjct: 542 SCRILLLS 565
Score = 249 bits (539), Expect = 1e-065
Identities = 105/155 (67%), Positives = 124/155 (80%)
Frame = -3 / -2
Query: 635 LDLEAPAVPPSSRLLKLPTLRANIRLGVAVRHSWCRPEVPDSFPSVLRTPQQNRVLPKWG 456
L+LEAPAVPPSS LL+ P L A+I LGVAV HSW +VP+SFP VL TPQ+ RVL K
Sbjct: 520 LNLEAPAVPPSSCLLEFPALGADIWLGVAVWHSWSFAKVPNSFPGVLGTPQEKRVLSKRS 341
Query: 455 TERELVEGEALSASIDDPGPRCLSEPERADLHRRHLADPLVVGHGAHNHGDLITLPLHEP 276
TE ELV+G+AL+ S+D+PGPR L EPER LH R+L DPLV+G GAH+H DL+ LP+HEP
Sbjct: 340 TEGELVKGKALATSVDNPGPRRLGEPERGHLHCRYLVDPLVIGDGAHDHSDLVRLPIHEP 161
Query: 275 DEAAHRERRAVGLAHEEALEDHGVEVALCPAHKEA 171
DEAAHRERR V LAHEE L+DHGVE+AL P H+EA
Sbjct: 160 DEAAHRERRPVCLAHEEPLQDHGVELALGPPHQEA 56
Score = 241 bits (521), Expect = 4e-063
Identities = 115/153 (75%), Positives = 116/153 (75%)
Frame = -1 / -3
Query: 574 ERT*GLVWL*GTPGAGPKCLTASLAFLGPLSRTVFCPSGARSASWSKVRHSPPALMILAL 395
ERT GLVWL GTPGA PKCLTASLAFLGPL R+VFCPSGAR ASWSKVRHSPPAL ILAL
Sbjct: 459 ERTYGLVWLCGTPGALPKCLTASLAFLGPLRRSVFCPSGARRASWSKVRHSPPALTILAL 280
Query: 394 AVSVNLSAQTFIAGTSLILLSSVTVPTITAI*SPFPSMNLTRRRIESGGRLVLLMKRRLR 215
AVSVNLSA TFIAG S L SSV VPTITAI S FPSMNLTRRRIESGGR VLLMK R R
Sbjct: 279 AVSVNLSAATFIAGIS*TLWSSVMVPTITAILSAFPSMNLTRRRIESGGRFVLLMKSRFR 100
Query: 214 ITALKLLFVXXXXXXXXXXXXXXXXXSDLGAVR 116
ITAL L V SDLGAVR
Sbjct: 99 ITALNWLLVLRTRKR*SLTSSLRYTSSDLGAVR 1
Score = 143 bits (307), Expect(2) = 7e-035
Identities = 64/127 (50%), Positives = 73/127 (57%)
Frame = +2 / +1
Query: 188 DKEQLQRRDPQAPLHEXXXXXXXXXXXXRQVHGGEG*SDRRDCGHRDRRQEDQRGAGDEG 367
D+E +QRRDP+A LHE RQVHG EG DR D GH R E R G+EG
Sbjct: 73 DQEPVQRRDPEAALHEQDKPAAALDAPPRQVHGWEGGQDRCDRGHHHR*PEGLRDTGNEG 252
Query: 368 LRAQVH*DSEGQDHQCWRRVPHLRPARAPCPTWAKHXXXXXXXXXXXXCQALRACTRSAS 547
RAQVH D EGQD Q W RVP+L PAR PC W +H C AL +RSA+
Sbjct: 253 GRAQVHRDGEGQDCQRWWRVPYL*PARPPCSAWTEHASPEGSQERQGSC*ALWQSSRSAT 432
Query: 548 QPHQALC 568
QPHQA+C
Sbjct: 433 QPHQAIC 453
Score = 24.0 bits (46), Expect(2) = 7e-035
Identities = 6/17 (35%), Positives = 11/17 (64%)
Frame = +3 / +2
Query: 693 FWCHSCNVLVVGISCHY 743
FW SC +L++ + H+
Sbjct: 530 FWAPSCRILLLSVYYHH 580
>gb|AV914207.1|AV914207 AV914207 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags5c24 5', mRNA sequence
Length = 661
Score = 239 bits (517), Expect(2) = e-105
Identities = 97/108 (89%), Positives = 103/108 (95%)
Frame = +3 / +3
Query: 303 IAVIVGTVTDDKRISEVPAMKVCALRFTETARARIINAGGECLTFDQLALRAPLGQNTVL 482
IAV+VGT+TDD RI E+PAMKV ALRFTETARARI+NAGGECLTFDQLALRAP G+NT+L
Sbjct: 336 IAVVVGTITDDMRIQEIPAMKVTALRFTETARARIVNAGGECLTFDQLALRAPTGENTIL 515
Query: 483 LRGPKNAREAVRHFGPAPGVPHSHTKPYVRSKGRKFEKARGRRNSRGF 626
LRGPKNAREAVRHFG APGVPHSHTKPYVRSKGRKFEKARGRRNSRGF
Sbjct: 516 LRGPKNAREAVRHFGKAPGVPHSHTKPYVRSKGRKFEKARGRRNSRGF 659
Score = 162 bits (349), Expect(2) = e-105
Identities = 70/83 (84%), Positives = 75/83 (90%)
Frame = +3 / +3
Query: 69 AMGIDLVAGGRNKKTKRTAPKSDDVYLKLLVKLYRFLVRRTKSNFNAVILKRLFMSKTNR 248
AMGIDLVAGGRNK+TKR APKSDDVYLKLLVKLYRFLVRRTKS FNAVILKRLFMSKTNR
Sbjct: 99 AMGIDLVAGGRNKRTKRVAPKSDDVYLKLLVKLYRFLVRRTKSKFNAVILKRLFMSKTNR 278
Query: 249 PPLSMRRLVRFMEGKGDQIAVIV 317
PPLSMRRL FM+GK ++ +V
Sbjct: 279 PPLSMRRLSNFMKGKEEKNIAVV 347
Score = 160 bits (344), Expect(3) = 2e-060
Identities = 73/91 (80%), Positives = 76/91 (83%)
Frame = -1 / -1
Query: 574 ERT*GLVWL*GTPGAGPKCLTASLAFLGPLSRTVFCPSGARSASWSKVRHSPPALMILAL 395
ERT*GLVWL GTPGA PKCLTAS AFLGPL+R VF P GAR ASWSKVRHSPPAL ILAL
Sbjct: 607 ERT*GLVWLCGTPGALPKCLTASRAFLGPLNRIVFSPVGARRASWSKVRHSPPALTILAL 428
Query: 394 AVSVNLSAQTFIAGTSLILLSSVTVPTITAI 302
AVSVNL A TFIAG S I +SSV VPT TA+
Sbjct: 427 AVSVNLRAVTFIAGISWIRMSSVIVPTTTAM 335
Score = 139 bits (298), Expect = 2e-032
Identities = 61/112 (54%), Positives = 78/112 (69%)
Frame = -3 / -3
Query: 626 EAPAVPPSSRLLKLPTLRANIRLGVAVRHSWCRPEVPDSFPSVLRTPQQNRVLPKWGTER 447
EA AVPP++ LLKLPTL A+I LGVAVRH+ EVP +L +PQQ+RVLP W TE
Sbjct: 659 EATAVPPTTSLLKLPTLGAHIGLGVAVRHTRSLAEVPHRLTGILGSPQQDRVLPSWSTES 480
Query: 446 ELVEGEALSASIDDPGPRCLSEPERADLHRRHLADPLVVGHGAHNHGDLITL 291
+LV+ EAL SID+P PRCL EP+ +LH L DP V+ A+NH +++ L
Sbjct: 479 KLVKSEALPTSIDNPCPRCLCEPQSGNLHCWDLLDPHVICDCANNHSNVLLL 324
Score = 92.7 bits (196), Expect(3) = 1e-027
Identities = 48/89 (53%), Positives = 51/89 (57%)
Frame = -1 / -1
Query: 334 SSVTVPTITAI*SPFPSMNLTRRRIESGGRLVLLMKRRLRITALKLLFVXXXXXXXXXXX 155
S + T S FP M L RRR+ESGGRLVLLMK LR+TAL LL V
Sbjct: 364 SVIVPTTTAMFFSSFPFMKLERRRMESGGRLVLLMKSLLRMTALNLLLVLLTRKR*SLTR 185
Query: 154 XXXXXXSDLGAVRLVFLLRPPATRSIPMA 68
SDLGA RLV L PPATRSIPMA
Sbjct: 184 SLRYTSSDLGATRLVLLFLPPATRSIPMA 98
Score = 73.0 bits (153), Expect(4) = 9e-033
Identities = 27/54 (50%), Positives = 33/54 (61%)
Frame = +2 / +2
Query: 314 CGHRDRRQEDQRGAGDEGLRAQVH*DSEGQDHQCWRRVPHLRPARAPCPTWAKH 475
C H R D R +EG R++VH DSEG+D QCW VPH PA +PC W +H
Sbjct: 347 CWHNHR*HADPRDPSNEGYRSEVHRDSEGKDCQCWWGVPHF*PACSPCSNWGEH 508
Score = 69.8 bits (146), Expect(3) = 2e-060
Identities = 30/43 (69%), Positives = 33/43 (76%)
Frame = -3 / -3
Query: 302 LITLPLHEPDEAAHRERRAVGLAHEEALEDHGVEVALCPAHKE 174
L+ L LHE E AH ERRAVGLAHEE LED GVE+AL P H+E
Sbjct: 332 LLLLSLHEVGETAHGERRAVGLAHEEPLEDDGVELALGPPHQE 204
Score = 57.0 bits (118), Expect(4) = 9e-033
Identities = 33/58 (56%), Positives = 35/58 (60%)
Frame = +1 / +1
Query: 454 VPHLGKTRFC*GVLRTLGKLSGTSGLHQECLTATPSLMFARRVGSLRRREEGGTAGAS 627
V LG+TR C*G R + GTS C TATPS M A RVGSLRR GGTA AS
Sbjct: 487 VLQLGRTRSC*GDPRMPVRR*GTSARLLVCRTATPSPMCAPRVGSLRRLVVGGTAVAS 660
Score = 41.8 bits (85), Expect(3) = 1e-027
Identities = 16/25 (64%), Positives = 17/25 (68%)
Frame = -2 / -2
Query: 591 QTSYPSSEHKAWCGCEALLVQARSA 517
QTSYP S H+AWCGC A RSA
Sbjct: 624 QTSYPWSAHRAWCGCAAHQEPCRSA 550
Score = 41.4 bits (84), Expect(3) = 2e-060
Identities = 14/21 (66%), Positives = 15/21 (71%)
Frame = -2 / -2
Query: 132 TWAPCAWSSCCGRRLRDRYPW 70
TWA AWSSC R+ R RYPW
Sbjct: 162 TWARRAWSSCSSRQRRGRYPW 100
Score = 35.4 bits (71), Expect(4) = 9e-033
Identities = 15/36 (41%), Positives = 19/36 (52%)
Frame = +2 / +2
Query: 188 DKEQLQRRDPQAPLHEXXXXXXXXXXXXRQVHGGEG 295
D+EQ+QRR PQ LHE Q+H G+G
Sbjct: 218 DQEQVQRRHPQEALHEQDQPPAALHAPSLQLHEGKG 325
Score = 30.4 bits (60), Expect(4) = 9e-033
Identities = 13/23 (56%), Positives = 14/23 (60%)
Frame = +2 / +2
Query: 71 HGYXXXXXXPQQEDQAHGAQVRR 139
HGY +QEDQA AQVRR
Sbjct: 101 HGYRPRRWREEQEDQARRAQVRR 169
Score = 26.7 bits (52), Expect(3) = 1e-027
Identities = 17/37 (45%), Positives = 18/37 (48%)
Frame = -2 / -2
Query: 489 PSAEPCFAQVGHXXXXXXXXGTLRQH**SWPSLSQ*T 379
PS C Q+ H GT QH* S PSLS *T
Sbjct: 522 PSTGSCSPQLEHGEQAGQK*GTPHQH*QSLPSLSL*T 412
>gb|CA031123.1|CA031123 HX09B09r HX Hordeum vulgare subsp. vulgare cDNA clone HX09B09
5-PRIME, mRNA sequence
Length = 634
Score = 239 bits (517), Expect(2) = e-105
Identities = 97/108 (89%), Positives = 103/108 (95%)
Frame = +3 / +2
Query: 303 IAVIVGTVTDDKRISEVPAMKVCALRFTETARARIINAGGECLTFDQLALRAPLGQNTVL 482
IAV+VGT+TDD RI E+PAMKV ALRFTETARARI+NAGGECLTFDQLALRAP G+NT+L
Sbjct: 311 IAVVVGTITDDMRIQEIPAMKVTALRFTETARARIVNAGGECLTFDQLALRAPTGENTIL 490
Query: 483 LRGPKNAREAVRHFGPAPGVPHSHTKPYVRSKGRKFEKARGRRNSRGF 626
LRGPKNAREAVRHFG APGVPHSHTKPYVRSKGRKFEKARGRRNSRGF
Sbjct: 491 LRGPKNAREAVRHFGKAPGVPHSHTKPYVRSKGRKFEKARGRRNSRGF 634
Score = 162 bits (349), Expect(2) = e-105
Identities = 70/83 (84%), Positives = 75/83 (90%)
Frame = +3 / +2
Query: 69 AMGIDLVAGGRNKKTKRTAPKSDDVYLKLLVKLYRFLVRRTKSNFNAVILKRLFMSKTNR 248
AMGIDLVAGGRNK+TKR APKSDDVYLKLLVKLYRFLVRRTKS FNAVILKRLFMSKTNR
Sbjct: 74 AMGIDLVAGGRNKRTKRVAPKSDDVYLKLLVKLYRFLVRRTKSKFNAVILKRLFMSKTNR 253
Query: 249 PPLSMRRLVRFMEGKGDQIAVIV 317
PPLSMRRL FM+GK ++ +V
Sbjct: 254 PPLSMRRLSNFMKGKEEKNIAVV 322
Score = 160 bits (344), Expect(3) = 2e-060
Identities = 73/91 (80%), Positives = 76/91 (83%)
Frame = -1 / -2
Query: 574 ERT*GLVWL*GTPGAGPKCLTASLAFLGPLSRTVFCPSGARSASWSKVRHSPPALMILAL 395
ERT*GLVWL GTPGA PKCLTAS AFLGPL+R VF P GAR ASWSKVRHSPPAL ILAL
Sbjct: 582 ERT*GLVWLCGTPGALPKCLTASRAFLGPLNRIVFSPVGARRASWSKVRHSPPALTILAL 403
Query: 394 AVSVNLSAQTFIAGTSLILLSSVTVPTITAI 302
AVSVNL A TFIAG S I +SSV VPT TA+
Sbjct: 402 AVSVNLRAVTFIAGISWIRMSSVIVPTTTAM 310
Score = 139 bits (298), Expect = 2e-032
Identities = 61/112 (54%), Positives = 78/112 (69%)
Frame = -3 / -1
Query: 626 EAPAVPPSSRLLKLPTLRANIRLGVAVRHSWCRPEVPDSFPSVLRTPQQNRVLPKWGTER 447
EA AVPP++ LLKLPTL A+I LGVAVRH+ EVP +L +PQQ+RVLP W TE
Sbjct: 634 EATAVPPTTSLLKLPTLGAHIGLGVAVRHTRSLAEVPHRLTGILGSPQQDRVLPSWSTES 455
Query: 446 ELVEGEALSASIDDPGPRCLSEPERADLHRRHLADPLVVGHGAHNHGDLITL 291
+LV+ EAL SID+P PRCL EP+ +LH L DP V+ A+NH +++ L
Sbjct: 454 KLVKSEALPTSIDNPCPRCLCEPQSGNLHCWDLLDPHVICDCANNHSNVLLL 299
Score = 92.7 bits (196), Expect(3) = 1e-027
Identities = 48/89 (53%), Positives = 51/89 (57%)
Frame = -1 / -2
Query: 334 SSVTVPTITAI*SPFPSMNLTRRRIESGGRLVLLMKRRLRITALKLLFVXXXXXXXXXXX 155
S + T S FP M L RRR+ESGGRLVLLMK LR+TAL LL V
Sbjct: 339 SVIVPTTTAMFFSSFPFMKLERRRMESGGRLVLLMKSLLRMTALNLLLVLLTRKR*SLTR 160
Query: 154 XXXXXXSDLGAVRLVFLLRPPATRSIPMA 68
SDLGA RLV L PPATRSIPMA
Sbjct: 159 SLRYTSSDLGATRLVLLFLPPATRSIPMA 73
Score = 73.0 bits (153), Expect(4) = 3e-032
Identities = 27/54 (50%), Positives = 33/54 (61%)
Frame = +2 / +1
Query: 314 CGHRDRRQEDQRGAGDEGLRAQVH*DSEGQDHQCWRRVPHLRPARAPCPTWAKH 475
C H R D R +EG R++VH DSEG+D QCW VPH PA +PC W +H
Sbjct: 322 CWHNHR*HADPRDPSNEGYRSEVHRDSEGKDCQCWWGVPHF*PACSPCSNWGEH 483
Score = 69.8 bits (146), Expect(3) = 2e-060
Identities = 30/43 (69%), Positives = 33/43 (76%)
Frame = -3 / -1
Query: 302 LITLPLHEPDEAAHRERRAVGLAHEEALEDHGVEVALCPAHKE 174
L+ L LHE E AH ERRAVGLAHEE LED GVE+AL P H+E
Sbjct: 307 LLLLSLHEVGETAHGERRAVGLAHEEPLEDDGVELALGPPHQE 179
Score = 55.1 bits (114), Expect(4) = 3e-032
Identities = 32/57 (56%), Positives = 34/57 (59%)
Frame = +1 / +3
Query: 454 VPHLGKTRFC*GVLRTLGKLSGTSGLHQECLTATPSLMFARRVGSLRRREEGGTAGA 624
V LG+TR C*G R + GTS C TATPS M A RVGSLRR GGTA A
Sbjct: 462 VLQLGRTRSC*GDPRMPVRR*GTSARLLVCRTATPSPMCAPRVGSLRRLVVGGTAVA 632
Score = 41.8 bits (85), Expect(3) = 1e-027
Identities = 16/25 (64%), Positives = 17/25 (68%)
Frame = -2 / -3
Query: 591 QTSYPSSEHKAWCGCEALLVQARSA 517
QTSYP S H+AWCGC A RSA
Sbjct: 599 QTSYPWSAHRAWCGCAAHQEPCRSA 525
Score = 41.4 bits (84), Expect(3) = 2e-060
Identities = 14/21 (66%), Positives = 15/21 (71%)
Frame = -2 / -3
Query: 132 TWAPCAWSSCCGRRLRDRYPW 70
TWA AWSSC R+ R RYPW
Sbjct: 137 TWARRAWSSCSSRQRRGRYPW 75
Score = 35.4 bits (71), Expect(4) = 3e-032
Identities = 15/36 (41%), Positives = 19/36 (52%)
Frame = +2 / +1
Query: 188 DKEQLQRRDPQAPLHEXXXXXXXXXXXXRQVHGGEG 295
D+EQ+QRR PQ LHE Q+H G+G
Sbjct: 193 DQEQVQRRHPQEALHEQDQPPAALHAPSLQLHEGKG 300
Score = 30.4 bits (60), Expect(4) = 3e-032
Identities = 13/23 (56%), Positives = 14/23 (60%)
Frame = +2 / +1
Query: 71 HGYXXXXXXPQQEDQAHGAQVRR 139
HGY +QEDQA AQVRR
Sbjct: 76 HGYRPRRWREEQEDQARRAQVRR 144
Score = 26.7 bits (52), Expect(3) = 1e-027
Identities = 17/37 (45%), Positives = 18/37 (48%)
Frame = -2 / -3
Query: 489 PSAEPCFAQVGHXXXXXXXXGTLRQH**SWPSLSQ*T 379
PS C Q+ H GT QH* S PSLS *T
Sbjct: 497 PSTGSCSPQLEHGEQAGQK*GTPHQH*QSLPSLSL*T 387
>gb|BJ454353.1|BJ454353 BJ454353 K. Sato unpublished cDNA library, cv. Akashinriki
vegetative stage leaves Hordeum vulgare subsp. vulgare
cDNA clone baak24b19 5', mRNA sequence
Length = 633
Score = 239 bits (517), Expect(2) = e-105
Identities = 97/108 (89%), Positives = 103/108 (95%)
Frame = +3 / +3
Query: 303 IAVIVGTVTDDKRISEVPAMKVCALRFTETARARIINAGGECLTFDQLALRAPLGQNTVL 482
IAV+VGT+TDD RI E+PAMKV ALRFTETARARI+NAGGECLTFDQLALRAP G+NT+L
Sbjct: 309 IAVVVGTITDDMRIQEIPAMKVTALRFTETARARIVNAGGECLTFDQLALRAPTGENTIL 488
Query: 483 LRGPKNAREAVRHFGPAPGVPHSHTKPYVRSKGRKFEKARGRRNSRGF 626
LRGPKNAREAVRHFG APGVPHSHTKPYVRSKGRKFEKARGRRNSRGF
Sbjct: 489 LRGPKNAREAVRHFGKAPGVPHSHTKPYVRSKGRKFEKARGRRNSRGF 632
Score = 162 bits (349), Expect(2) = e-105
Identities = 70/83 (84%), Positives = 75/83 (90%)
Frame = +3 / +3
Query: 69 AMGIDLVAGGRNKKTKRTAPKSDDVYLKLLVKLYRFLVRRTKSNFNAVILKRLFMSKTNR 248
AMGIDLVAGGRNK+TKR APKSDDVYLKLLVKLYRFLVRRTKS FNAVILKRLFMSKTNR
Sbjct: 72 AMGIDLVAGGRNKRTKRVAPKSDDVYLKLLVKLYRFLVRRTKSKFNAVILKRLFMSKTNR 251
Query: 249 PPLSMRRLVRFMEGKGDQIAVIV 317
PPLSMRRL FM+GK ++ +V
Sbjct: 252 PPLSMRRLSNFMKGKEEKNIAVV 320
Score = 160 bits (344), Expect(3) = 2e-060
Identities = 73/91 (80%), Positives = 76/91 (83%)
Frame = -1 / -3
Query: 574 ERT*GLVWL*GTPGAGPKCLTASLAFLGPLSRTVFCPSGARSASWSKVRHSPPALMILAL 395
ERT*GLVWL GTPGA PKCLTAS AFLGPL+R VF P GAR ASWSKVRHSPPAL ILAL
Sbjct: 580 ERT*GLVWLCGTPGALPKCLTASRAFLGPLNRIVFSPVGARRASWSKVRHSPPALTILAL 401
Query: 394 AVSVNLSAQTFIAGTSLILLSSVTVPTITAI 302
AVSVNL A TFIAG S I +SSV VPT TA+
Sbjct: 400 AVSVNLRAVTFIAGISWIRMSSVIVPTTTAM 308
Score = 139 bits (298), Expect = 2e-032
Identities = 61/112 (54%), Positives = 78/112 (69%)
Frame = -3 / -2
Query: 626 EAPAVPPSSRLLKLPTLRANIRLGVAVRHSWCRPEVPDSFPSVLRTPQQNRVLPKWGTER 447
EA AVPP++ LLKLPTL A+I LGVAVRH+ EVP +L +PQQ+RVLP W TE
Sbjct: 632 EATAVPPTTSLLKLPTLGAHIGLGVAVRHTRSLAEVPHRLTGILGSPQQDRVLPSWSTES 453
Query: 446 ELVEGEALSASIDDPGPRCLSEPERADLHRRHLADPLVVGHGAHNHGDLITL 291
+LV+ EAL SID+P PRCL EP+ +LH L DP V+ A+NH +++ L
Sbjct: 452 KLVKSEALPTSIDNPCPRCLCEPQSGNLHCWDLLDPHVICDCANNHSNVLLL 297
Score = 92.7 bits (196), Expect(3) = 1e-027
Identities = 48/89 (53%), Positives = 51/89 (57%)
Frame = -1 / -3
Query: 334 SSVTVPTITAI*SPFPSMNLTRRRIESGGRLVLLMKRRLRITALKLLFVXXXXXXXXXXX 155
S + T S FP M L RRR+ESGGRLVLLMK LR+TAL LL V
Sbjct: 337 SVIVPTTTAMFFSSFPFMKLERRRMESGGRLVLLMKSLLRMTALNLLLVLLTRKR*SLTR 158
Query: 154 XXXXXXSDLGAVRLVFLLRPPATRSIPMA 68
SDLGA RLV L PPATRSIPMA
Sbjct: 157 SLRYTSSDLGATRLVLLFLPPATRSIPMA 71
Score = 73.0 bits (153), Expect(4) = 9e-033
Identities = 27/54 (50%), Positives = 33/54 (61%)
Frame = +2 / +2
Query: 314 CGHRDRRQEDQRGAGDEGLRAQVH*DSEGQDHQCWRRVPHLRPARAPCPTWAKH 475
C H R D R +EG R++VH DSEG+D QCW VPH PA +PC W +H
Sbjct: 320 CWHNHR*HADPRDPSNEGYRSEVHRDSEGKDCQCWWGVPHF*PACSPCSNWGEH 481
Score = 69.8 bits (146), Expect(3) = 2e-060
Identities = 30/43 (69%), Positives = 33/43 (76%)
Frame = -3 / -2
Query: 302 LITLPLHEPDEAAHRERRAVGLAHEEALEDHGVEVALCPAHKE 174
L+ L LHE E AH ERRAVGLAHEE LED GVE+AL P H+E
Sbjct: 305 LLLLSLHEVGETAHGERRAVGLAHEEPLEDDGVELALGPPHQE 177
Score = 57.0 bits (118), Expect(4) = 9e-033
Identities = 33/58 (56%), Positives = 35/58 (60%)
Frame = +1 / +1
Query: 454 VPHLGKTRFC*GVLRTLGKLSGTSGLHQECLTATPSLMFARRVGSLRRREEGGTAGAS 627
V LG+TR C*G R + GTS C TATPS M A RVGSLRR GGTA AS
Sbjct: 460 VLQLGRTRSC*GDPRMPVRR*GTSARLLVCRTATPSPMCAPRVGSLRRLVVGGTAVAS 633
Score = 41.8 bits (85), Expect(3) = 1e-027
Identities = 16/25 (64%), Positives = 17/25 (68%)
Frame = -2 / -1
Query: 591 QTSYPSSEHKAWCGCEALLVQARSA 517
QTSYP S H+AWCGC A RSA
Sbjct: 597 QTSYPWSAHRAWCGCAAHQEPCRSA 523
Score = 41.4 bits (84), Expect(3) = 2e-060
Identities = 14/21 (66%), Positives = 15/21 (71%)
Frame = -2 / -1
Query: 132 TWAPCAWSSCCGRRLRDRYPW 70
TWA AWSSC R+ R RYPW
Sbjct: 135 TWARRAWSSCSSRQRRGRYPW 73
Score = 35.4 bits (71), Expect(4) = 9e-033
Identities = 15/36 (41%), Positives = 19/36 (52%)
Frame = +2 / +2
Query: 188 DKEQLQRRDPQAPLHEXXXXXXXXXXXXRQVHGGEG 295
D+EQ+QRR PQ LHE Q+H G+G
Sbjct: 191 DQEQVQRRHPQEALHEQDQPPAALHAPSLQLHEGKG 298
Score = 30.4 bits (60), Expect(4) = 9e-033
Identities = 13/23 (56%), Positives = 14/23 (60%)
Frame = +2 / +2
Query: 71 HGYXXXXXXPQQEDQAHGAQVRR 139
HGY +QEDQA AQVRR
Sbjct: 74 HGYRPRRWREEQEDQARRAQVRR 142
Score = 26.7 bits (52), Expect(3) = 1e-027
Identities = 17/37 (45%), Positives = 18/37 (48%)
Frame = -2 / -1
Query: 489 PSAEPCFAQVGHXXXXXXXXGTLRQH**SWPSLSQ*T 379
PS C Q+ H GT QH* S PSLS *T
Sbjct: 495 PSTGSCSPQLEHGEQAGQK*GTPHQH*QSLPSLSL*T 385
>gb|CA031784.1|CA031784 HX11C02r HX Hordeum vulgare subsp. vulgare cDNA clone HX11C02
5-PRIME, mRNA sequence
Length = 640
Score = 237 bits (511), Expect(2) = e-104
Identities = 96/107 (89%), Positives = 102/107 (95%)
Frame = +3 / +3
Query: 303 IAVIVGTVTDDKRISEVPAMKVCALRFTETARARIINAGGECLTFDQLALRAPLGQNTVL 482
IAV+VGT+TDD RI E+PAMKV ALRFTETARARI+NAGGECLTFDQLALRAP G+NT+L
Sbjct: 318 IAVVVGTITDDMRIQEIPAMKVTALRFTETARARIVNAGGECLTFDQLALRAPTGENTIL 497
Query: 483 LRGPKNAREAVRHFGPAPGVPHSHTKPYVRSKGRKFEKARGRRNSRG 623
LRGPKNAREAVRHFG APGVPHSHTKPYVRSKGRKFEKARGRRNSRG
Sbjct: 498 LRGPKNAREAVRHFGKAPGVPHSHTKPYVRSKGRKFEKARGRRNSRG 638
Score = 162 bits (349), Expect(2) = e-104
Identities = 70/83 (84%), Positives = 75/83 (90%)
Frame = +3 / +3
Query: 69 AMGIDLVAGGRNKKTKRTAPKSDDVYLKLLVKLYRFLVRRTKSNFNAVILKRLFMSKTNR 248
AMGIDLVAGGRNK+TKR APKSDDVYLKLLVKLYRFLVRRTKS FNAVILKRLFMSKTNR
Sbjct: 81 AMGIDLVAGGRNKRTKRVAPKSDDVYLKLLVKLYRFLVRRTKSKFNAVILKRLFMSKTNR 260
Query: 249 PPLSMRRLVRFMEGKGDQIAVIV 317
PPLSMRRL FM+GK ++ +V
Sbjct: 261 PPLSMRRLSNFMKGKEEKNIAVV 329
Score = 160 bits (344), Expect(3) = 2e-060
Identities = 73/91 (80%), Positives = 76/91 (83%)
Frame = -1 / -1
Query: 574 ERT*GLVWL*GTPGAGPKCLTASLAFLGPLSRTVFCPSGARSASWSKVRHSPPALMILAL 395
ERT*GLVWL GTPGA PKCLTAS AFLGPL+R VF P GAR ASWSKVRHSPPAL ILAL
Sbjct: 589 ERT*GLVWLCGTPGALPKCLTASRAFLGPLNRIVFSPVGARRASWSKVRHSPPALTILAL 410
Query: 394 AVSVNLSAQTFIAGTSLILLSSVTVPTITAI 302
AVSVNL A TFIAG S I +SSV VPT TA+
Sbjct: 409 AVSVNLRAVTFIAGISWIRMSSVIVPTTTAM 317
Score = 137 bits (293), Expect = 1e-031
Identities = 60/111 (54%), Positives = 77/111 (69%)
Frame = -3 / -3
Query: 623 APAVPPSSRLLKLPTLRANIRLGVAVRHSWCRPEVPDSFPSVLRTPQQNRVLPKWGTERE 444
A AVPP++ LLKLPTL A+I LGVAVRH+ EVP +L +PQQ+RVLP W TE +
Sbjct: 638 ATAVPPTTSLLKLPTLGAHIGLGVAVRHTRSLAEVPHRLTGILGSPQQDRVLPSWSTESK 459
Query: 443 LVEGEALSASIDDPGPRCLSEPERADLHRRHLADPLVVGHGAHNHGDLITL 291
LV+ EAL SID+P PRCL EP+ +LH L DP V+ A+NH +++ L
Sbjct: 458 LVKSEALPTSIDNPCPRCLCEPQSGNLHCWDLLDPHVICDCANNHSNVLLL 306
Score = 92.7 bits (196), Expect(3) = 1e-027
Identities = 48/89 (53%), Positives = 51/89 (57%)
Frame = -1 / -1
Query: 334 SSVTVPTITAI*SPFPSMNLTRRRIESGGRLVLLMKRRLRITALKLLFVXXXXXXXXXXX 155
S + T S FP M L RRR+ESGGRLVLLMK LR+TAL LL V
Sbjct: 346 SVIVPTTTAMFFSSFPFMKLERRRMESGGRLVLLMKSLLRMTALNLLLVLLTRKR*SLTR 167
Query: 154 XXXXXXSDLGAVRLVFLLRPPATRSIPMA 68
SDLGA RLV L PPATRSIPMA
Sbjct: 166 SLRYTSSDLGATRLVLLFLPPATRSIPMA 80
Score = 73.0 bits (153), Expect(4) = 3e-032
Identities = 27/54 (50%), Positives = 33/54 (61%)
Frame = +2 / +2
Query: 314 CGHRDRRQEDQRGAGDEGLRAQVH*DSEGQDHQCWRRVPHLRPARAPCPTWAKH 475
C H R D R +EG R++VH DSEG+D QCW VPH PA +PC W +H
Sbjct: 329 CWHNHR*HADPRDPSNEGYRSEVHRDSEGKDCQCWWGVPHF*PACSPCSNWGEH 490
Score = 69.8 bits (146), Expect(3) = 2e-060
Identities = 30/43 (69%), Positives = 33/43 (76%)
Frame = -3 / -3
Query: 302 LITLPLHEPDEAAHRERRAVGLAHEEALEDHGVEVALCPAHKE 174
L+ L LHE E AH ERRAVGLAHEE LED GVE+AL P H+E
Sbjct: 314 LLLLSLHEVGETAHGERRAVGLAHEEPLEDDGVELALGPPHQE 186
Score = 55.1 bits (114), Expect(4) = 3e-032
Identities = 32/57 (56%), Positives = 34/57 (59%)
Frame = +1 / +1
Query: 454 VPHLGKTRFC*GVLRTLGKLSGTSGLHQECLTATPSLMFARRVGSLRRREEGGTAGA 624
V LG+TR C*G R + GTS C TATPS M A RVGSLRR GGTA A
Sbjct: 469 VLQLGRTRSC*GDPRMPVRR*GTSARLLVCRTATPSPMCAPRVGSLRRLVVGGTAVA 639
Score = 41.8 bits (85), Expect(3) = 1e-027
Identities = 16/25 (64%), Positives = 17/25 (68%)
Frame = -2 / -2
Query: 591 QTSYPSSEHKAWCGCEALLVQARSA 517
QTSYP S H+AWCGC A RSA
Sbjct: 606 QTSYPWSAHRAWCGCAAHQEPCRSA 532
Score = 41.4 bits (84), Expect(3) = 2e-060
Identities = 14/21 (66%), Positives = 15/21 (71%)
Frame = -2 / -2
Query: 132 TWAPCAWSSCCGRRLRDRYPW 70
TWA AWSSC R+ R RYPW
Sbjct: 144 TWARRAWSSCSSRQRRGRYPW 82
Score = 35.4 bits (71), Expect(4) = 3e-032
Identities = 15/36 (41%), Positives = 19/36 (52%)
Frame = +2 / +2
Query: 188 DKEQLQRRDPQAPLHEXXXXXXXXXXXXRQVHGGEG 295
D+EQ+QRR PQ LHE Q+H G+G
Sbjct: 200 DQEQVQRRHPQEALHEQDQPPAALHAPSLQLHEGKG 307
Score = 30.4 bits (60), Expect(4) = 3e-032
Identities = 13/23 (56%), Positives = 14/23 (60%)
Frame = +2 / +2
Query: 71 HGYXXXXXXPQQEDQAHGAQVRR 139
HGY +QEDQA AQVRR
Sbjct: 83 HGYRPRRWREEQEDQARRAQVRR 151
Score = 26.7 bits (52), Expect(3) = 1e-027
Identities = 17/37 (45%), Positives = 18/37 (48%)
Frame = -2 / -2
Query: 489 PSAEPCFAQVGHXXXXXXXXGTLRQH**SWPSLSQ*T 379
PS C Q+ H GT QH* S PSLS *T
Sbjct: 504 PSTGSCSPQLEHGEQAGQK*GTPHQH*QSLPSLSL*T 394
>gb|CA013879.1|CA013879 HT09M01r HT Hordeum vulgare subsp. vulgare cDNA clone HT09M01
5-PRIME, mRNA sequence
Length = 639
Score = 237 bits (511), Expect(2) = e-104
Identities = 96/107 (89%), Positives = 102/107 (95%)
Frame = +3 / +2
Query: 303 IAVIVGTVTDDKRISEVPAMKVCALRFTETARARIINAGGECLTFDQLALRAPLGQNTVL 482
IAV+VGT+TDD RI E+PAMKV ALRFTETARARI+NAGGECLTFDQLALRAP G+NT+L
Sbjct: 317 IAVVVGTITDDMRIQEIPAMKVTALRFTETARARIVNAGGECLTFDQLALRAPTGENTIL 496
Query: 483 LRGPKNAREAVRHFGPAPGVPHSHTKPYVRSKGRKFEKARGRRNSRG 623
LRGPKNAREAVRHFG APGVPHSHTKPYVRSKGRKFEKARGRRNSRG
Sbjct: 497 LRGPKNAREAVRHFGKAPGVPHSHTKPYVRSKGRKFEKARGRRNSRG 637
Score = 162 bits (349), Expect(2) = e-104
Identities = 70/83 (84%), Positives = 75/83 (90%)
Frame = +3 / +2
Query: 69 AMGIDLVAGGRNKKTKRTAPKSDDVYLKLLVKLYRFLVRRTKSNFNAVILKRLFMSKTNR 248
AMGIDLVAGGRNK+TKR APKSDDVYLKLLVKLYRFLVRRTKS FNAVILKRLFMSKTNR
Sbjct: 80 AMGIDLVAGGRNKRTKRVAPKSDDVYLKLLVKLYRFLVRRTKSKFNAVILKRLFMSKTNR 259
Query: 249 PPLSMRRLVRFMEGKGDQIAVIV 317
PPLSMRRL FM+GK ++ +V
Sbjct: 260 PPLSMRRLSNFMKGKEEKNIAVV 328
Score = 160 bits (344), Expect(3) = 2e-060
Identities = 73/91 (80%), Positives = 76/91 (83%)
Frame = -1 / -1
Query: 574 ERT*GLVWL*GTPGAGPKCLTASLAFLGPLSRTVFCPSGARSASWSKVRHSPPALMILAL 395
ERT*GLVWL GTPGA PKCLTAS AFLGPL+R VF P GAR ASWSKVRHSPPAL ILAL
Sbjct: 588 ERT*GLVWLCGTPGALPKCLTASRAFLGPLNRIVFSPVGARRASWSKVRHSPPALTILAL 409
Query: 394 AVSVNLSAQTFIAGTSLILLSSVTVPTITAI 302
AVSVNL A TFIAG S I +SSV VPT TA+
Sbjct: 408 AVSVNLRAVTFIAGISWIRMSSVIVPTTTAM 316
Score = 137 bits (293), Expect = 1e-031
Identities = 60/111 (54%), Positives = 77/111 (69%)
Frame = -3 / -3
Query: 623 APAVPPSSRLLKLPTLRANIRLGVAVRHSWCRPEVPDSFPSVLRTPQQNRVLPKWGTERE 444
A AVPP++ LLKLPTL A+I LGVAVRH+ EVP +L +PQQ+RVLP W TE +
Sbjct: 637 ATAVPPTTSLLKLPTLGAHIGLGVAVRHTRSLAEVPHRLTGILGSPQQDRVLPSWSTESK 458
Query: 443 LVEGEALSASIDDPGPRCLSEPERADLHRRHLADPLVVGHGAHNHGDLITL 291
LV+ EAL SID+P PRCL EP+ +LH L DP V+ A+NH +++ L
Sbjct: 457 LVKSEALPTSIDNPCPRCLCEPQSGNLHCWDLLDPHVICDCANNHSNVLLL 305
Score = 92.7 bits (196), Expect(3) = 1e-027
Identities = 48/89 (53%), Positives = 51/89 (57%)
Frame = -1 / -1
Query: 334 SSVTVPTITAI*SPFPSMNLTRRRIESGGRLVLLMKRRLRITALKLLFVXXXXXXXXXXX 155
S + T S FP M L RRR+ESGGRLVLLMK LR+TAL LL V
Sbjct: 345 SVIVPTTTAMFFSSFPFMKLERRRMESGGRLVLLMKSLLRMTALNLLLVLLTRKR*SLTR 166
Query: 154 XXXXXXSDLGAVRLVFLLRPPATRSIPMA 68
SDLGA RLV L PPATRSIPMA
Sbjct: 165 SLRYTSSDLGATRLVLLFLPPATRSIPMA 79
Score = 73.0 bits (153), Expect(4) = 3e-032
Identities = 27/54 (50%), Positives = 33/54 (61%)
Frame = +2 / +1
Query: 314 CGHRDRRQEDQRGAGDEGLRAQVH*DSEGQDHQCWRRVPHLRPARAPCPTWAKH 475
C H R D R +EG R++VH DSEG+D QCW VPH PA +PC W +H
Sbjct: 328 CWHNHR*HADPRDPSNEGYRSEVHRDSEGKDCQCWWGVPHF*PACSPCSNWGEH 489
Score = 69.8 bits (146), Expect(3) = 2e-060
Identities = 30/43 (69%), Positives = 33/43 (76%)
Frame = -3 / -3
Query: 302 LITLPLHEPDEAAHRERRAVGLAHEEALEDHGVEVALCPAHKE 174
L+ L LHE E AH ERRAVGLAHEE LED GVE+AL P H+E
Sbjct: 313 LLLLSLHEVGETAHGERRAVGLAHEEPLEDDGVELALGPPHQE 185
Score = 55.1 bits (114), Expect(4) = 3e-032
Identities = 32/57 (56%), Positives = 34/57 (59%)
Frame = +1 / +3
Query: 454 VPHLGKTRFC*GVLRTLGKLSGTSGLHQECLTATPSLMFARRVGSLRRREEGGTAGA 624
V LG+TR C*G R + GTS C TATPS M A RVGSLRR GGTA A
Sbjct: 468 VLQLGRTRSC*GDPRMPVRR*GTSARLLVCRTATPSPMCAPRVGSLRRLVVGGTAVA 638
Score = 41.8 bits (85), Expect(3) = 1e-027
Identities = 16/25 (64%), Positives = 17/25 (68%)
Frame = -2 / -2
Query: 591 QTSYPSSEHKAWCGCEALLVQARSA 517
QTSYP S H+AWCGC A RSA
Sbjct: 605 QTSYPWSAHRAWCGCAAHQEPCRSA 531
Score = 41.4 bits (84), Expect(3) = 2e-060
Identities = 14/21 (66%), Positives = 15/21 (71%)
Frame = -2 / -2
Query: 132 TWAPCAWSSCCGRRLRDRYPW 70
TWA AWSSC R+ R RYPW
Sbjct: 143 TWARRAWSSCSSRQRRGRYPW 81
Score = 35.4 bits (71), Expect(4) = 3e-032
Identities = 15/36 (41%), Positives = 19/36 (52%)
Frame = +2 / +1
Query: 188 DKEQLQRRDPQAPLHEXXXXXXXXXXXXRQVHGGEG 295
D+EQ+QRR PQ LHE Q+H G+G
Sbjct: 199 DQEQVQRRHPQEALHEQDQPPAALHAPSLQLHEGKG 306
Score = 30.4 bits (60), Expect(4) = 3e-032
Identities = 13/23 (56%), Positives = 14/23 (60%)
Frame = +2 / +1
Query: 71 HGYXXXXXXPQQEDQAHGAQVRR 139
HGY +QEDQA AQVRR
Sbjct: 82 HGYRPRRWREEQEDQARRAQVRR 150
Score = 26.7 bits (52), Expect(3) = 1e-027
Identities = 17/37 (45%), Positives = 18/37 (48%)
Frame = -2 / -2
Query: 489 PSAEPCFAQVGHXXXXXXXXGTLRQH**SWPSLSQ*T 379
PS C Q+ H GT QH* S PSLS *T
Sbjct: 503 PSTGSCSPQLEHGEQAGQK*GTPHQH*QSLPSLSL*T 393
>gb|CV057277.1|CV057277 BNEL26a2 Barley EST endosperm library Hordeum vulgare subsp.
vulgare cDNA clone BNEL26a2 5' similar to cytoplasmic
ribosomal protein L18, mRNA sequence
Length = 609
Score = 234 bits (505), Expect(2) = e-103
Identities = 95/106 (89%), Positives = 101/106 (95%)
Frame = +3 / +1
Query: 303 IAVIVGTVTDDKRISEVPAMKVCALRFTETARARIINAGGECLTFDQLALRAPLGQNTVL 482
IAV+VGT+TDD RI E+PAMKV ALRFTETARARI+NAGGECLTFDQLALRAP G+NT+L
Sbjct: 292 IAVVVGTITDDMRIQEIPAMKVTALRFTETARARIVNAGGECLTFDQLALRAPTGENTIL 471
Query: 483 LRGPKNAREAVRHFGPAPGVPHSHTKPYVRSKGRKFEKARGRRNSR 620
LRGPKNAREAVRHFG APGVPHSHTKPYVRSKGRKFEKARGRRNSR
Sbjct: 472 LRGPKNAREAVRHFGKAPGVPHSHTKPYVRSKGRKFEKARGRRNSR 609
Score = 162 bits (349), Expect(2) = e-103
Identities = 70/83 (84%), Positives = 75/83 (90%)
Frame = +3 / +1
Query: 69 AMGIDLVAGGRNKKTKRTAPKSDDVYLKLLVKLYRFLVRRTKSNFNAVILKRLFMSKTNR 248
AMGIDLVAGGRNK+TKR APKSDDVYLKLLVKLYRFLVRRTKS FNAVILKRLFMSKTNR
Sbjct: 55 AMGIDLVAGGRNKRTKRVAPKSDDVYLKLLVKLYRFLVRRTKSKFNAVILKRLFMSKTNR 234
Query: 249 PPLSMRRLVRFMEGKGDQIAVIV 317
PPLSMRRL FM+GK ++ +V
Sbjct: 235 PPLSMRRLSNFMKGKEEKNIAVV 303
Score = 160 bits (344), Expect(3) = 2e-060
Identities = 73/91 (80%), Positives = 76/91 (83%)
Frame = -1 / -2
Query: 574 ERT*GLVWL*GTPGAGPKCLTASLAFLGPLSRTVFCPSGARSASWSKVRHSPPALMILAL 395
ERT*GLVWL GTPGA PKCLTAS AFLGPL+R VF P GAR ASWSKVRHSPPAL ILAL
Sbjct: 563 ERT*GLVWLCGTPGALPKCLTASRAFLGPLNRIVFSPVGARRASWSKVRHSPPALTILAL 384
Query: 394 AVSVNLSAQTFIAGTSLILLSSVTVPTITAI 302
AVSVNL A TFIAG S I +SSV VPT TA+
Sbjct: 383 AVSVNLRAVTFIAGISWIRMSSVIVPTTTAM 291
Score = 138 bits (297), Expect = 3e-032
Identities = 60/110 (54%), Positives = 77/110 (70%)
Frame = -3 / -1
Query: 620 PAVPPSSRLLKLPTLRANIRLGVAVRHSWCRPEVPDSFPSVLRTPQQNRVLPKWGTEREL 441
PAVPP++ LLKLPTL A+I LGVAVRH+ EVP +L +PQQ+RVLP W TE +L
Sbjct: 609 PAVPPTTSLLKLPTLGAHIGLGVAVRHTRSLAEVPHRLTGILGSPQQDRVLPSWSTESKL 430
Query: 440 VEGEALSASIDDPGPRCLSEPERADLHRRHLADPLVVGHGAHNHGDLITL 291
V+ EAL SID+P PRCL EP+ +LH L DP V+ A+NH +++ L
Sbjct: 429 VKSEALPTSIDNPCPRCLCEPQSGNLHCWDLLDPHVICDCANNHSNVLLL 280
Score = 92.7 bits (196), Expect(3) = 1e-027
Identities = 48/89 (53%), Positives = 51/89 (57%)
Frame = -1 / -2
Query: 334 SSVTVPTITAI*SPFPSMNLTRRRIESGGRLVLLMKRRLRITALKLLFVXXXXXXXXXXX 155
S + T S FP M L RRR+ESGGRLVLLMK LR+TAL LL V
Sbjct: 320 SVIVPTTTAMFFSSFPFMKLERRRMESGGRLVLLMKSLLRMTALNLLLVLLTRKR*SLTR 141
Query: 154 XXXXXXSDLGAVRLVFLLRPPATRSIPMA 68
SDLGA RLV L PPATRSIPMA
Sbjct: 140 SLRYTSSDLGATRLVLLFLPPATRSIPMA 54
Score = 73.0 bits (153), Expect(4) = 4e-032
Identities = 27/54 (50%), Positives = 33/54 (61%)
Frame = +2 / +3
Query: 314 CGHRDRRQEDQRGAGDEGLRAQVH*DSEGQDHQCWRRVPHLRPARAPCPTWAKH 475
C H R D R +EG R++VH DSEG+D QCW VPH PA +PC W +H
Sbjct: 303 CWHNHR*HADPRDPSNEGYRSEVHRDSEGKDCQCWWGVPHF*PACSPCSNWGEH 464
Score = 69.8 bits (146), Expect(3) = 2e-060
Identities = 30/43 (69%), Positives = 33/43 (76%)
Frame = -3 / -1
Query: 302 LITLPLHEPDEAAHRERRAVGLAHEEALEDHGVEVALCPAHKE 174
L+ L LHE E AH ERRAVGLAHEE LED GVE+AL P H+E
Sbjct: 288 LLLLSLHEVGETAHGERRAVGLAHEEPLEDDGVELALGPPHQE 160
Score = 54.7 bits (113), Expect(4) = 4e-032
Identities = 31/55 (56%), Positives = 33/55 (60%)
Frame = +1 / +2
Query: 454 VPHLGKTRFC*GVLRTLGKLSGTSGLHQECLTATPSLMFARRVGSLRRREEGGTA 618
V LG+TR C*G R + GTS C TATPS M A RVGSLRR GGTA
Sbjct: 443 VLQLGRTRSC*GDPRMPVRR*GTSARLLVCRTATPSPMCAPRVGSLRRLVVGGTA 607
Score = 41.8 bits (85), Expect(3) = 1e-027
Identities = 16/25 (64%), Positives = 17/25 (68%)
Frame = -2 / -3
Query: 591 QTSYPSSEHKAWCGCEALLVQARSA 517
QTSYP S H+AWCGC A RSA
Sbjct: 580 QTSYPWSAHRAWCGCAAHQEPCRSA 506
Score = 41.4 bits (84), Expect(3) = 2e-060
Identities = 14/21 (66%), Positives = 15/21 (71%)
Frame = -2 / -3
Query: 132 TWAPCAWSSCCGRRLRDRYPW 70
TWA AWSSC R+ R RYPW
Sbjct: 118 TWARRAWSSCSSRQRRGRYPW 56
Score = 35.4 bits (71), Expect(4) = 4e-032
Identities = 15/36 (41%), Positives = 19/36 (52%)
Frame = +2 / +3
Query: 188 DKEQLQRRDPQAPLHEXXXXXXXXXXXXRQVHGGEG 295
D+EQ+QRR PQ LHE Q+H G+G
Sbjct: 174 DQEQVQRRHPQEALHEQDQPPAALHAPSLQLHEGKG 281
Score = 30.4 bits (60), Expect(4) = 4e-032
Identities = 13/23 (56%), Positives = 14/23 (60%)
Frame = +2 / +3
Query: 71 HGYXXXXXXPQQEDQAHGAQVRR 139
HGY +QEDQA AQVRR
Sbjct: 57 HGYRPRRWREEQEDQARRAQVRR 125
Score = 26.7 bits (52), Expect(3) = 1e-027
Identities = 17/37 (45%), Positives = 18/37 (48%)
Frame = -2 / -3
Query: 489 PSAEPCFAQVGHXXXXXXXXGTLRQH**SWPSLSQ*T 379
PS C Q+ H GT QH* S PSLS *T
Sbjct: 478 PSTGSCSPQLEHGEQAGQK*GTPHQH*QSLPSLSL*T 368
>gb|CV059672.1|CV059672 BNEL4F8 Barley EST endosperm library Hordeum vulgare subsp. vulgare
cDNA clone BNEL4F8 5' similar to cytoplasmic ribosomal
protein L18, mRNA sequence
Length = 635
Score = 230 bits (497), Expect(2) = e-102
Identities = 93/105 (88%), Positives = 100/105 (95%)
Frame = +3 / +3
Query: 303 IAVIVGTVTDDKRISEVPAMKVCALRFTETARARIINAGGECLTFDQLALRAPLGQNTVL 482
IAV+VGT+TDD RI E+PAMKV ALRFTETARARI+NAGGECLTFDQLALRAP G+NT+L
Sbjct: 321 IAVVVGTITDDMRIQEIPAMKVTALRFTETARARIVNAGGECLTFDQLALRAPTGENTIL 500
Query: 483 LRGPKNAREAVRHFGPAPGVPHSHTKPYVRSKGRKFEKARGRRNS 617
LRGPKNAREAVRHFG APGVPHSHTKPYVRSKGRKFEKARGRRN+
Sbjct: 501 LRGPKNAREAVRHFGKAPGVPHSHTKPYVRSKGRKFEKARGRRNT 635
Score = 162 bits (349), Expect(2) = e-102
Identities = 70/83 (84%), Positives = 75/83 (90%)
Frame = +3 / +3
Query: 69 AMGIDLVAGGRNKKTKRTAPKSDDVYLKLLVKLYRFLVRRTKSNFNAVILKRLFMSKTNR 248
AMGIDLVAGGRNK+TKR APKSDDVYLKLLVKLYRFLVRRTKS FNAVILKRLFMSKTNR
Sbjct: 84 AMGIDLVAGGRNKRTKRVAPKSDDVYLKLLVKLYRFLVRRTKSKFNAVILKRLFMSKTNR 263
Query: 249 PPLSMRRLVRFMEGKGDQIAVIV 317
PPLSMRRL FM+GK ++ +V
Sbjct: 264 PPLSMRRLSNFMKGKEEKNIAVV 332
Score = 160 bits (344), Expect(3) = 2e-060
Identities = 73/91 (80%), Positives = 76/91 (83%)
Frame = -1 / -2
Query: 574 ERT*GLVWL*GTPGAGPKCLTASLAFLGPLSRTVFCPSGARSASWSKVRHSPPALMILAL 395
ERT*GLVWL GTPGA PKCLTAS AFLGPL+R VF P GAR ASWSKVRHSPPAL ILAL
Sbjct: 592 ERT*GLVWLCGTPGALPKCLTASRAFLGPLNRIVFSPVGARRASWSKVRHSPPALTILAL 413
Query: 394 AVSVNLSAQTFIAGTSLILLSSVTVPTITAI 302
AVSVNL A TFIAG S I +SSV VPT TA+
Sbjct: 412 AVSVNLRAVTFIAGISWIRMSSVIVPTTTAM 320
Score = 133 bits (286), Expect = 1e-030
Identities = 58/108 (53%), Positives = 75/108 (69%)
Frame = -3 / -1
Query: 614 VPPSSRLLKLPTLRANIRLGVAVRHSWCRPEVPDSFPSVLRTPQQNRVLPKWGTERELVE 435
VPP++ LLKLPTL A+I LGVAVRH+ EVP +L +PQQ+RVLP W TE +LV+
Sbjct: 632 VPPTTSLLKLPTLGAHIGLGVAVRHTRSLAEVPHRLTGILGSPQQDRVLPSWSTESKLVK 453
Query: 434 GEALSASIDDPGPRCLSEPERADLHRRHLADPLVVGHGAHNHGDLITL 291
EAL SID+P PRCL EP+ +LH L DP V+ A+NH +++ L
Sbjct: 452 SEALPTSIDNPCPRCLCEPQSGNLHCWDLLDPHVICDCANNHSNVLLL 309
Score = 92.7 bits (196), Expect(3) = 1e-027
Identities = 48/89 (53%), Positives = 51/89 (57%)
Frame = -1 / -2
Query: 334 SSVTVPTITAI*SPFPSMNLTRRRIESGGRLVLLMKRRLRITALKLLFVXXXXXXXXXXX 155
S + T S FP M L RRR+ESGGRLVLLMK LR+TAL LL V
Sbjct: 349 SVIVPTTTAMFFSSFPFMKLERRRMESGGRLVLLMKSLLRMTALNLLLVLLTRKR*SLTR 170
Query: 154 XXXXXXSDLGAVRLVFLLRPPATRSIPMA 68
SDLGA RLV L PPATRSIPMA
Sbjct: 169 SLRYTSSDLGATRLVLLFLPPATRSIPMA 83
Score = 73.0 bits (153), Expect(4) = 1e-031
Identities = 27/54 (50%), Positives = 33/54 (61%)
Frame = +2 / +2
Query: 314 CGHRDRRQEDQRGAGDEGLRAQVH*DSEGQDHQCWRRVPHLRPARAPCPTWAKH 475
C H R D R +EG R++VH DSEG+D QCW VPH PA +PC W +H
Sbjct: 332 CWHNHR*HADPRDPSNEGYRSEVHRDSEGKDCQCWWGVPHF*PACSPCSNWGEH 493
Score = 69.8 bits (146), Expect(3) = 2e-060
Identities = 30/43 (69%), Positives = 33/43 (76%)
Frame = -3 / -1
Query: 302 LITLPLHEPDEAAHRERRAVGLAHEEALEDHGVEVALCPAHKE 174
L+ L LHE E AH ERRAVGLAHEE LED GVE+AL P H+E
Sbjct: 317 LLLLSLHEVGETAHGERRAVGLAHEEPLEDDGVELALGPPHQE 189
Score = 52.8 bits (109), Expect(4) = 1e-031
Identities = 30/54 (55%), Positives = 32/54 (59%)
Frame = +1 / +1
Query: 454 VPHLGKTRFC*GVLRTLGKLSGTSGLHQECLTATPSLMFARRVGSLRRREEGGT 615
V LG+TR C*G R + GTS C TATPS M A RVGSLRR GGT
Sbjct: 472 VLQLGRTRSC*GDPRMPVRR*GTSARLLVCRTATPSPMCAPRVGSLRRLVVGGT 633
Score = 41.8 bits (85), Expect(3) = 1e-027
Identities = 16/25 (64%), Positives = 17/25 (68%)
Frame = -2 / -3
Query: 591 QTSYPSSEHKAWCGCEALLVQARSA 517
QTSYP S H+AWCGC A RSA
Sbjct: 609 QTSYPWSAHRAWCGCAAHQEPCRSA 535
Score = 41.4 bits (84), Expect(3) = 2e-060
Identities = 14/21 (66%), Positives = 15/21 (71%)
Frame = -2 / -3
Query: 132 TWAPCAWSSCCGRRLRDRYPW 70
TWA AWSSC R+ R RYPW
Sbjct: 147 TWARRAWSSCSSRQRRGRYPW 85
Score = 35.4 bits (71), Expect(4) = 1e-031
Identities = 15/36 (41%), Positives = 19/36 (52%)
Frame = +2 / +2
Query: 188 DKEQLQRRDPQAPLHEXXXXXXXXXXXXRQVHGGEG 295
D+EQ+QRR PQ LHE Q+H G+G
Sbjct: 203 DQEQVQRRHPQEALHEQDQPPAALHAPSLQLHEGKG 310
Score = 30.4 bits (60), Expect(4) = 1e-031
Identities = 13/23 (56%), Positives = 14/23 (60%)
Frame = +2 / +2
Query: 71 HGYXXXXXXPQQEDQAHGAQVRR 139
HGY +QEDQA AQVRR
Sbjct: 86 HGYRPRRWREEQEDQARRAQVRR 154
Score = 26.7 bits (52), Expect(3) = 1e-027
Identities = 17/37 (45%), Positives = 18/37 (48%)
Frame = -2 / -3
Query: 489 PSAEPCFAQVGHXXXXXXXXGTLRQH**SWPSLSQ*T 379
PS C Q+ H GT QH* S PSLS *T
Sbjct: 507 PSTGSCSPQLEHGEQAGQK*GTPHQH*QSLPSLSL*T 397
>gb|BU978921.1|BU978921 HA14K10r HA Hordeum vulgare subsp. vulgare cDNA clone HA14K10
5-PRIME, mRNA sequence
Length = 629
Score = 230 bits (496), Expect(2) = e-102
Identities = 93/104 (89%), Positives = 99/104 (95%)
Frame = +3 / +3
Query: 303 IAVIVGTVTDDKRISEVPAMKVCALRFTETARARIINAGGECLTFDQLALRAPLGQNTVL 482
IAV+VGT+TDD RI E+PAMKV ALRFTETARARI+NAGGECLTFDQLALRAP G+NT+L
Sbjct: 318 IAVVVGTITDDMRIQEIPAMKVTALRFTETARARIVNAGGECLTFDQLALRAPTGENTIL 497
Query: 483 LRGPKNAREAVRHFGPAPGVPHSHTKPYVRSKGRKFEKARGRRN 614
LRGPKNAREAVRHFG APGVPHSHTKPYVRSKGRKFEKARGRRN
Sbjct: 498 LRGPKNAREAVRHFGKAPGVPHSHTKPYVRSKGRKFEKARGRRN 629
Score = 162 bits (349), Expect(2) = e-102
Identities = 70/83 (84%), Positives = 75/83 (90%)
Frame = +3 / +3
Query: 69 AMGIDLVAGGRNKKTKRTAPKSDDVYLKLLVKLYRFLVRRTKSNFNAVILKRLFMSKTNR 248
AMGIDLVAGGRNK+TKR APKSDDVYLKLLVKLYRFLVRRTKS FNAVILKRLFMSKTNR
Sbjct: 81 AMGIDLVAGGRNKRTKRVAPKSDDVYLKLLVKLYRFLVRRTKSKFNAVILKRLFMSKTNR 260
Query: 249 PPLSMRRLVRFMEGKGDQIAVIV 317
PPLSMRRL FM+GK ++ +V
Sbjct: 261 PPLSMRRLSNFMKGKEEKNIAVV 329
Score = 160 bits (344), Expect(3) = 2e-060
Identities = 73/91 (80%), Positives = 76/91 (83%)
Frame = -1 / -2
Query: 574 ERT*GLVWL*GTPGAGPKCLTASLAFLGPLSRTVFCPSGARSASWSKVRHSPPALMILAL 395
ERT*GLVWL GTPGA PKCLTAS AFLGPL+R VF P GAR ASWSKVRHSPPAL ILAL
Sbjct: 589 ERT*GLVWLCGTPGALPKCLTASRAFLGPLNRIVFSPVGARRASWSKVRHSPPALTILAL 410
Query: 394 AVSVNLSAQTFIAGTSLILLSSVTVPTITAI 302
AVSVNL A TFIAG S I +SSV VPT TA+
Sbjct: 409 AVSVNLRAVTFIAGISWIRMSSVIVPTTTAM 317
Score = 133 bits (286), Expect = 1e-030
Identities = 58/108 (53%), Positives = 75/108 (69%)
Frame = -3 / -1
Query: 614 VPPSSRLLKLPTLRANIRLGVAVRHSWCRPEVPDSFPSVLRTPQQNRVLPKWGTERELVE 435
VPP++ LLKLPTL A+I LGVAVRH+ EVP +L +PQQ+RVLP W TE +LV+
Sbjct: 629 VPPTTSLLKLPTLGAHIGLGVAVRHTRSLAEVPHRLTGILGSPQQDRVLPSWSTESKLVK 450
Query: 434 GEALSASIDDPGPRCLSEPERADLHRRHLADPLVVGHGAHNHGDLITL 291
EAL SID+P PRCL EP+ +LH L DP V+ A+NH +++ L
Sbjct: 449 SEALPTSIDNPCPRCLCEPQSGNLHCWDLLDPHVICDCANNHSNVLLL 306
Score = 92.7 bits (196), Expect(3) = 1e-027
Identities = 48/89 (53%), Positives = 51/89 (57%)
Frame = -1 / -2
Query: 334 SSVTVPTITAI*SPFPSMNLTRRRIESGGRLVLLMKRRLRITALKLLFVXXXXXXXXXXX 155
S + T S FP M L RRR+ESGGRLVLLMK LR+TAL LL V
Sbjct: 346 SVIVPTTTAMFFSSFPFMKLERRRMESGGRLVLLMKSLLRMTALNLLLVLLTRKR*SLTR 167
Query: 154 XXXXXXSDLGAVRLVFLLRPPATRSIPMA 68
SDLGA RLV L PPATRSIPMA
Sbjct: 166 SLRYTSSDLGATRLVLLFLPPATRSIPMA 80
Score = 73.0 bits (153), Expect(4) = 7e-031
Identities = 27/54 (50%), Positives = 33/54 (61%)
Frame = +2 / +2
Query: 314 CGHRDRRQEDQRGAGDEGLRAQVH*DSEGQDHQCWRRVPHLRPARAPCPTWAKH 475
C H R D R +EG R++VH DSEG+D QCW VPH PA +PC W +H
Sbjct: 329 CWHNHR*HADPRDPSNEGYRSEVHRDSEGKDCQCWWGVPHF*PACSPCSNWGEH 490
Score = 69.8 bits (146), Expect(3) = 2e-060
Identities = 30/43 (69%), Positives = 33/43 (76%)
Frame = -3 / -1
Query: 302 LITLPLHEPDEAAHRERRAVGLAHEEALEDHGVEVALCPAHKE 174
L+ L LHE E AH ERRAVGLAHEE LED GVE+AL P H+E
Sbjct: 314 LLLLSLHEVGETAHGERRAVGLAHEEPLEDDGVELALGPPHQE 186
Score = 50.6 bits (104), Expect(4) = 7e-031
Identities = 29/53 (54%), Positives = 31/53 (58%)
Frame = +1 / +1
Query: 454 VPHLGKTRFC*GVLRTLGKLSGTSGLHQECLTATPSLMFARRVGSLRRREEGG 612
V LG+TR C*G R + GTS C TATPS M A RVGSLRR GG
Sbjct: 469 VLQLGRTRSC*GDPRMPVRR*GTSARLLVCRTATPSPMCAPRVGSLRRLVVGG 627
Score = 41.8 bits (85), Expect(3) = 1e-027
Identities = 16/25 (64%), Positives = 17/25 (68%)
Frame = -2 / -3
Query: 591 QTSYPSSEHKAWCGCEALLVQARSA 517
QTSYP S H+AWCGC A RSA
Sbjct: 606 QTSYPWSAHRAWCGCAAHQEPCRSA 532
Score = 41.4 bits (84), Expect(3) = 2e-060
Identities = 14/21 (66%), Positives = 15/21 (71%)
Frame = -2 / -3
Query: 132 TWAPCAWSSCCGRRLRDRYPW 70
TWA AWSSC R+ R RYPW
Sbjct: 144 TWARRAWSSCSSRQRRGRYPW 82
Score = 35.4 bits (71), Expect(4) = 7e-031
Identities = 15/36 (41%), Positives = 19/36 (52%)
Frame = +2 / +2
Query: 188 DKEQLQRRDPQAPLHEXXXXXXXXXXXXRQVHGGEG 295
D+EQ+QRR PQ LHE Q+H G+G
Sbjct: 200 DQEQVQRRHPQEALHEQDQPPAALHAPSLQLHEGKG 307
Score = 30.4 bits (60), Expect(4) = 7e-031
Identities = 13/23 (56%), Positives = 14/23 (60%)
Frame = +2 / +2
Query: 71 HGYXXXXXXPQQEDQAHGAQVRR 139
HGY +QEDQA AQVRR
Sbjct: 83 HGYRPRRWREEQEDQARRAQVRR 151
Score = 26.7 bits (52), Expect(3) = 1e-027
Identities = 17/37 (45%), Positives = 18/37 (48%)
Frame = -2 / -3
Query: 489 PSAEPCFAQVGHXXXXXXXXGTLRQH**SWPSLSQ*T 379
PS C Q+ H GT QH* S PSLS *T
Sbjct: 504 PSTGSCSPQLEHGEQAGQK*GTPHQH*QSLPSLSL*T 394
>gb|AV934278.1|AV934278 AV934278 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal11m09 5', mRNA sequence
Length = 617
Score = 230 bits (496), Expect(2) = e-102
Identities = 93/104 (89%), Positives = 99/104 (95%)
Frame = +3 / +2
Query: 303 IAVIVGTVTDDKRISEVPAMKVCALRFTETARARIINAGGECLTFDQLALRAPLGQNTVL 482
IAV+VGT+TDD RI E+PAMKV ALRFTETARARI+NAGGECLTFDQLALRAP G+NT+L
Sbjct: 305 IAVVVGTITDDMRIQEIPAMKVTALRFTETARARIVNAGGECLTFDQLALRAPTGENTIL 484
Query: 483 LRGPKNAREAVRHFGPAPGVPHSHTKPYVRSKGRKFEKARGRRN 614
LRGPKNAREAVRHFG APGVPHSHTKPYVRSKGRKFEKARGRRN
Sbjct: 485 LRGPKNAREAVRHFGKAPGVPHSHTKPYVRSKGRKFEKARGRRN 616
Score = 162 bits (349), Expect(2) = e-102
Identities = 70/83 (84%), Positives = 75/83 (90%)
Frame = +3 / +2
Query: 69 AMGIDLVAGGRNKKTKRTAPKSDDVYLKLLVKLYRFLVRRTKSNFNAVILKRLFMSKTNR 248
AMGIDLVAGGRNK+TKR APKSDDVYLKLLVKLYRFLVRRTKS FNAVILKRLFMSKTNR
Sbjct: 68 AMGIDLVAGGRNKRTKRVAPKSDDVYLKLLVKLYRFLVRRTKSKFNAVILKRLFMSKTNR 247
Query: 249 PPLSMRRLVRFMEGKGDQIAVIV 317
PPLSMRRL FM+GK ++ +V
Sbjct: 248 PPLSMRRLSNFMKGKEEKNIAVV 316
Score = 160 bits (344), Expect(3) = 2e-060
Identities = 73/91 (80%), Positives = 76/91 (83%)
Frame = -1 / -3
Query: 574 ERT*GLVWL*GTPGAGPKCLTASLAFLGPLSRTVFCPSGARSASWSKVRHSPPALMILAL 395
ERT*GLVWL GTPGA PKCLTAS AFLGPL+R VF P GAR ASWSKVRHSPPAL ILAL
Sbjct: 576 ERT*GLVWLCGTPGALPKCLTASRAFLGPLNRIVFSPVGARRASWSKVRHSPPALTILAL 397
Query: 394 AVSVNLSAQTFIAGTSLILLSSVTVPTITAI 302
AVSVNL A TFIAG S I +SSV VPT TA+
Sbjct: 396 AVSVNLRAVTFIAGISWIRMSSVIVPTTTAM 304
Score = 133 bits (286), Expect = 1e-030
Identities = 58/108 (53%), Positives = 75/108 (69%)
Frame = -3 / -2
Query: 614 VPPSSRLLKLPTLRANIRLGVAVRHSWCRPEVPDSFPSVLRTPQQNRVLPKWGTERELVE 435
VPP++ LLKLPTL A+I LGVAVRH+ EVP +L +PQQ+RVLP W TE +LV+
Sbjct: 616 VPPTTSLLKLPTLGAHIGLGVAVRHTRSLAEVPHRLTGILGSPQQDRVLPSWSTESKLVK 437
Query: 434 GEALSASIDDPGPRCLSEPERADLHRRHLADPLVVGHGAHNHGDLITL 291
EAL SID+P PRCL EP+ +LH L DP V+ A+NH +++ L
Sbjct: 436 SEALPTSIDNPCPRCLCEPQSGNLHCWDLLDPHVICDCANNHSNVLLL 293
Score = 92.7 bits (196), Expect(3) = 1e-027
Identities = 48/89 (53%), Positives = 51/89 (57%)
Frame = -1 / -3
Query: 334 SSVTVPTITAI*SPFPSMNLTRRRIESGGRLVLLMKRRLRITALKLLFVXXXXXXXXXXX 155
S + T S FP M L RRR+ESGGRLVLLMK LR+TAL LL V
Sbjct: 333 SVIVPTTTAMFFSSFPFMKLERRRMESGGRLVLLMKSLLRMTALNLLLVLLTRKR*SLTR 154
Query: 154 XXXXXXSDLGAVRLVFLLRPPATRSIPMA 68
SDLGA RLV L PPATRSIPMA
Sbjct: 153 SLRYTSSDLGATRLVLLFLPPATRSIPMA 67
Score = 73.0 bits (153), Expect(4) = 1e-031
Identities = 27/54 (50%), Positives = 33/54 (61%)
Frame = +2 / +1
Query: 314 CGHRDRRQEDQRGAGDEGLRAQVH*DSEGQDHQCWRRVPHLRPARAPCPTWAKH 475
C H R D R +EG R++VH DSEG+D QCW VPH PA +PC W +H
Sbjct: 316 CWHNHR*HADPRDPSNEGYRSEVHRDSEGKDCQCWWGVPHF*PACSPCSNWGEH 477
Score = 69.8 bits (146), Expect(3) = 2e-060
Identities = 30/43 (69%), Positives = 33/43 (76%)
Frame = -3 / -2
Query: 302 LITLPLHEPDEAAHRERRAVGLAHEEALEDHGVEVALCPAHKE 174
L+ L LHE E AH ERRAVGLAHEE LED GVE+AL P H+E
Sbjct: 301 LLLLSLHEVGETAHGERRAVGLAHEEPLEDDGVELALGPPHQE 173
Score = 52.8 bits (109), Expect(4) = 1e-031
Identities = 30/54 (55%), Positives = 32/54 (59%)
Frame = +1 / +3
Query: 454 VPHLGKTRFC*GVLRTLGKLSGTSGLHQECLTATPSLMFARRVGSLRRREEGGT 615
V LG+TR C*G R + GTS C TATPS M A RVGSLRR GGT
Sbjct: 456 VLQLGRTRSC*GDPRMPVRR*GTSARLLVCRTATPSPMCAPRVGSLRRLVVGGT 617
Score = 41.8 bits (85), Expect(3) = 1e-027
Identities = 16/25 (64%), Positives = 17/25 (68%)
Frame = -2 / -1
Query: 591 QTSYPSSEHKAWCGCEALLVQARSA 517
QTSYP S H+AWCGC A RSA
Sbjct: 593 QTSYPWSAHRAWCGCAAHQEPCRSA 519
Score = 41.4 bits (84), Expect(3) = 2e-060
Identities = 14/21 (66%), Positives = 15/21 (71%)
Frame = -2 / -1
Query: 132 TWAPCAWSSCCGRRLRDRYPW 70
TWA AWSSC R+ R RYPW
Sbjct: 131 TWARRAWSSCSSRQRRGRYPW 69
Score = 35.4 bits (71), Expect(4) = 1e-031
Identities = 15/36 (41%), Positives = 19/36 (52%)
Frame = +2 / +1
Query: 188 DKEQLQRRDPQAPLHEXXXXXXXXXXXXRQVHGGEG 295
D+EQ+QRR PQ LHE Q+H G+G
Sbjct: 187 DQEQVQRRHPQEALHEQDQPPAALHAPSLQLHEGKG 294
Score = 30.4 bits (60), Expect(4) = 1e-031
Identities = 13/23 (56%), Positives = 14/23 (60%)
Frame = +2 / +1
Query: 71 HGYXXXXXXPQQEDQAHGAQVRR 139
HGY +QEDQA AQVRR
Sbjct: 70 HGYRPRRWREEQEDQARRAQVRR 138
Score = 26.7 bits (52), Expect(3) = 1e-027
Identities = 17/37 (45%), Positives = 18/37 (48%)
Frame = -2 / -1
Query: 489 PSAEPCFAQVGHXXXXXXXXGTLRQH**SWPSLSQ*T 379
PS C Q+ H GT QH* S PSLS *T
Sbjct: 491 PSTGSCSPQLEHGEQAGQK*GTPHQH*QSLPSLSL*T 381
>gb|BU978046.1|BU978046 HA12H18r HA Hordeum vulgare subsp. vulgare cDNA clone HA12H18
5-PRIME, mRNA sequence
Length = 615
Score = 227 bits (490), Expect(2) = e-101
Identities = 92/103 (89%), Positives = 98/103 (95%)
Frame = +3 / +1
Query: 303 IAVIVGTVTDDKRISEVPAMKVCALRFTETARARIINAGGECLTFDQLALRAPLGQNTVL 482
IAV+VGT+TDD RI E+PAMKV ALRFTETARARI+NAGGECLTFDQLALRAP G+NT+L
Sbjct: 307 IAVVVGTITDDMRIQEIPAMKVTALRFTETARARIVNAGGECLTFDQLALRAPTGENTIL 486
Query: 483 LRGPKNAREAVRHFGPAPGVPHSHTKPYVRSKGRKFEKARGRR 611
LRGPKNAREAVRHFG APGVPHSHTKPYVRSKGRKFEKARGRR
Sbjct: 487 LRGPKNAREAVRHFGKAPGVPHSHTKPYVRSKGRKFEKARGRR 615
Score = 162 bits (349), Expect(2) = e-101
Identities = 70/83 (84%), Positives = 75/83 (90%)
Frame = +3 / +1
Query: 69 AMGIDLVAGGRNKKTKRTAPKSDDVYLKLLVKLYRFLVRRTKSNFNAVILKRLFMSKTNR 248
AMGIDLVAGGRNK+TKR APKSDDVYLKLLVKLYRFLVRRTKS FNAVILKRLFMSKTNR
Sbjct: 70 AMGIDLVAGGRNKRTKRVAPKSDDVYLKLLVKLYRFLVRRTKSKFNAVILKRLFMSKTNR 249
Query: 249 PPLSMRRLVRFMEGKGDQIAVIV 317
PPLSMRRL FM+GK ++ +V
Sbjct: 250 PPLSMRRLSNFMKGKEEKNIAVV 318
Score = 160 bits (344), Expect(3) = 2e-060
Identities = 73/91 (80%), Positives = 76/91 (83%)
Frame = -1 / -2
Query: 574 ERT*GLVWL*GTPGAGPKCLTASLAFLGPLSRTVFCPSGARSASWSKVRHSPPALMILAL 395
ERT*GLVWL GTPGA PKCLTAS AFLGPL+R VF P GAR ASWSKVRHSPPAL ILAL
Sbjct: 578 ERT*GLVWLCGTPGALPKCLTASRAFLGPLNRIVFSPVGARRASWSKVRHSPPALTILAL 399
Query: 394 AVSVNLSAQTFIAGTSLILLSSVTVPTITAI 302
AVSVNL A TFIAG S I +SSV VPT TA+
Sbjct: 398 AVSVNLRAVTFIAGISWIRMSSVIVPTTTAM 306
Score = 132 bits (282), Expect = 3e-030
Identities = 57/107 (53%), Positives = 74/107 (69%)
Frame = -3 / -1
Query: 611 PPSSRLLKLPTLRANIRLGVAVRHSWCRPEVPDSFPSVLRTPQQNRVLPKWGTERELVEG 432
PP++ LLKLPTL A+I LGVAVRH+ EVP +L +PQQ+RVLP W TE +LV+
Sbjct: 615 PPTTSLLKLPTLGAHIGLGVAVRHTRSLAEVPHRLTGILGSPQQDRVLPSWSTESKLVKS 436
Query: 431 EALSASIDDPGPRCLSEPERADLHRRHLADPLVVGHGAHNHGDLITL 291
EAL SID+P PRCL EP+ +LH L DP V+ A+NH +++ L
Sbjct: 435 EALPTSIDNPCPRCLCEPQSGNLHCWDLLDPHVICDCANNHSNVLLL 295
Score = 92.7 bits (196), Expect(3) = 1e-027
Identities = 48/89 (53%), Positives = 51/89 (57%)
Frame = -1 / -2
Query: 334 SSVTVPTITAI*SPFPSMNLTRRRIESGGRLVLLMKRRLRITALKLLFVXXXXXXXXXXX 155
S + T S FP M L RRR+ESGGRLVLLMK LR+TAL LL V
Sbjct: 335 SVIVPTTTAMFFSSFPFMKLERRRMESGGRLVLLMKSLLRMTALNLLLVLLTRKR*SLTR 156
Query: 154 XXXXXXSDLGAVRLVFLLRPPATRSIPMA 68
SDLGA RLV L PPATRSIPMA
Sbjct: 155 SLRYTSSDLGATRLVLLFLPPATRSIPMA 69
Score = 73.0 bits (153), Expect(4) = 4e-030
Identities = 27/54 (50%), Positives = 33/54 (61%)
Frame = +2 / +3
Query: 314 CGHRDRRQEDQRGAGDEGLRAQVH*DSEGQDHQCWRRVPHLRPARAPCPTWAKH 475
C H R D R +EG R++VH DSEG+D QCW VPH PA +PC W +H
Sbjct: 318 CWHNHR*HADPRDPSNEGYRSEVHRDSEGKDCQCWWGVPHF*PACSPCSNWGEH 479
Score = 69.8 bits (146), Expect(3) = 2e-060
Identities = 30/43 (69%), Positives = 33/43 (76%)
Frame = -3 / -1
Query: 302 LITLPLHEPDEAAHRERRAVGLAHEEALEDHGVEVALCPAHKE 174
L+ L LHE E AH ERRAVGLAHEE LED GVE+AL P H+E
Sbjct: 303 LLLLSLHEVGETAHGERRAVGLAHEEPLEDDGVELALGPPHQE 175
Score = 47.8 bits (98), Expect(4) = 4e-030
Identities = 27/48 (56%), Positives = 29/48 (60%)
Frame = +1 / +2
Query: 454 VPHLGKTRFC*GVLRTLGKLSGTSGLHQECLTATPSLMFARRVGSLRR 597
V LG+TR C*G R + GTS C TATPS M A RVGSLRR
Sbjct: 458 VLQLGRTRSC*GDPRMPVRR*GTSARLLVCRTATPSPMCAPRVGSLRR 601
Score = 41.8 bits (85), Expect(3) = 1e-027
Identities = 16/25 (64%), Positives = 17/25 (68%)
Frame = -2 / -3
Query: 591 QTSYPSSEHKAWCGCEALLVQARSA 517
QTSYP S H+AWCGC A RSA
Sbjct: 595 QTSYPWSAHRAWCGCAAHQEPCRSA 521
Score = 41.4 bits (84), Expect(3) = 2e-060
Identities = 14/21 (66%), Positives = 15/21 (71%)
Frame = -2 / -3
Query: 132 TWAPCAWSSCCGRRLRDRYPW 70
TWA AWSSC R+ R RYPW
Sbjct: 133 TWARRAWSSCSSRQRRGRYPW 71
Score = 35.4 bits (71), Expect(4) = 4e-030
Identities = 15/36 (41%), Positives = 19/36 (52%)
Frame = +2 / +3
Query: 188 DKEQLQRRDPQAPLHEXXXXXXXXXXXXRQVHGGEG 295
D+EQ+QRR PQ LHE Q+H G+G
Sbjct: 189 DQEQVQRRHPQEALHEQDQPPAALHAPSLQLHEGKG 296
Score = 30.4 bits (60), Expect(4) = 4e-030
Identities = 13/23 (56%), Positives = 14/23 (60%)
Frame = +2 / +3
Query: 71 HGYXXXXXXPQQEDQAHGAQVRR 139
HGY +QEDQA AQVRR
Sbjct: 72 HGYRPRRWREEQEDQARRAQVRR 140
Score = 26.7 bits (52), Expect(3) = 1e-027
Identities = 17/37 (45%), Positives = 18/37 (48%)
Frame = -2 / -3
Query: 489 PSAEPCFAQVGHXXXXXXXXGTLRQH**SWPSLSQ*T 379
PS C Q+ H GT QH* S PSLS *T
Sbjct: 493 PSTGSCSPQLEHGEQAGQK*GTPHQH*QSLPSLSL*T 383
>gb|CK123379.1|CK123379 BES1824103m02 BES1824 Hordeum vulgare subsp. vulgare cDNA clone
MPMGp2010M023 5-PRIME, mRNA sequence
Length = 724
Score = 284 bits (615), Expect(2) = e-101
Identities = 120/132 (90%), Positives = 128/132 (96%)
Frame = +3 / +2
Query: 111 TKRTAPKSDDVYLKLLVKLYRFLVRRTKSNFNAVILKRLFMSKTNRPPLSMRRLVRFMEG 290
TKRTAPKSDDVYLKLLVKLYRFLVRRTKS FNAVILKRLFMSKTNRPPLSMRRLVRFM+G
Sbjct: 2 TKRTAPKSDDVYLKLLVKLYRFLVRRTKSQFNAVILKRLFMSKTNRPPLSMRRLVRFMDG 181
Query: 291 KGDQIAVIVGTVTDDKRISEVPAMKVCALRFTETARARIINAGGECLTFDQLALRAPLGQ 470
K D+IAVIVGT+TDD+R+ E+PAMKV ALRFTETARARI+NAGGECLTFDQLALRAPLGQ
Sbjct: 182 KADKIAVIVGTITDDQRVYEIPAMKVAALRFTETARARIVNAGGECLTFDQLALRAPLGQ 361
Query: 471 NTVLLRGPKNAR 506
NT+LLRGPKNAR
Sbjct: 362 NTLLLRGPKNAR 397
Score = 200 bits (431), Expect(2) = 4e-064
Identities = 97/132 (73%), Positives = 98/132 (74%)
Frame = -1 / -2
Query: 505 LAFLGPLSRTVFCPSGARSASWSKVRHSPPALMILALAVSVNLSAQTFIAGTSLILLSSV 326
LAFLGPL R+VFCPSGAR ASWSKVRHSPPAL ILALAVSVNLSA TFIAG S L SSV
Sbjct: 396 LAFLGPLRRSVFCPSGARRASWSKVRHSPPALTILALAVSVNLSAATFIAGIS*TLWSSV 217
Query: 325 TVPTITAI*SPFPSMNLTRRRIESGGRLVLLMKRRLRITALKLLFVXXXXXXXXXXXXXX 146
VPTITAI S FPSMNLTRRRIESGGR VLLMK R RITAL L V
Sbjct: 216 MVPTITAILSAFPSMNLTRRRIESGGRFVLLMKSRFRITALNWLLVLRTRKR*SLTSSLR 37
Query: 145 XXXSDLGAVRLV 110
SDLGAVRLV
Sbjct: 36 YTSSDLGAVRLV 1
Score = 188 bits (406), Expect(3) = 3e-055
Identities = 77/119 (64%), Positives = 93/119 (78%)
Frame = -3 / -1
Query: 527 PEVPDSFPSVLRTPQQNRVLPKWGTERELVEGEALSASIDDPGPRCLSEPERADLHRRHL 348
P+ + P VL TPQ+ RVL K TE ELV+G+AL+ S+D+PGPR L EPER LH R+L
Sbjct: 418 PKCLTAXPGVLGTPQEKRVLSKRSTEGELVKGKALATSVDNPGPRRLGEPERGHLHCRYL 239
Query: 347 ADPLVVGHGAHNHGDLITLPLHEPDEAAHRERRAVGLAHEEALEDHGVEVALCPAHKEA 171
DPLV+G GAH+H DL+ LP+HEPDEAAHRERR V LAHEE L+DHGVE+AL P H+EA
Sbjct: 238 VDPLVIGDGAHDHSDLVRLPIHEPDEAAHRERRPVCLAHEEPLQDHGVELALGPPHQEA 62
Score = 118 bits (253), Expect(3) = 4e-041
Identities = 52/96 (54%), Positives = 58/96 (60%)
Frame = +2 / +1
Query: 188 DKEQLQRRDPQAPLHEXXXXXXXXXXXXRQVHGGEG*SDRRDCGHRDRRQEDQRGAGDEG 367
D+E +QRRDP+A LHE RQVHG EG DR D GH R E R G+EG
Sbjct: 79 DQEPVQRRDPEAALHEQDKPAAALDAPPRQVHGWEGGQDRCDRGHHHR*PEGLRDTGNEG 258
Query: 368 LRAQVH*DSEGQDHQCWRRVPHLRPARAPCPTWAKH 475
RAQVH D EGQD Q W RVP+L PAR PC W +H
Sbjct: 259 GRAQVHRDGEGQDCQRWWRVPYL*PARPPCSAWTEH 366
Score = 104 bits (221), Expect(2) = e-101
Identities = 42/48 (87%), Positives = 43/48 (89%)
Frame = +3 / +3
Query: 492 PKNAREAVRHFGPAPGVPHSHTKPYVRSKGRKFEKARGRRNSRGFKV* 635
P+ AVRHFG APGVPHSHTKPYVRSKGRKFEKARGRRNSRGFKV*
Sbjct: 384 PRTPGXAVRHFGKAPGVPHSHTKPYVRSKGRKFEKARGRRNSRGFKV* 527
Score = 65.2 bits (136), Expect(2) = 4e-064
Identities = 29/44 (65%), Positives = 34/44 (77%)
Frame = -3 / -3
Query: 635 LDLEAPAVPPSSRLLKLPTLRANIRLGVAVRHSWCRPEVPDSFP 504
L+LEAPAVPPSS LL+ P L A+I LGVAV HSW +VP+S P
Sbjct: 527 LNLEAPAVPPSSCLLEFPALGADIWLGVAVWHSWSFAKVPNSXP 396
Score = 64.3 bits (134), Expect(3) = 4e-041
Identities = 30/44 (68%), Positives = 32/44 (72%)
Frame = +1 / +1
Query: 505 GKLSGTSGLHQECLTATPSLMFARRVGSLRRREEGGTAGASRSK 636
GKL GT QEC TATPS M A R G+ RR+EEGGTAGASR K
Sbjct: 397 GKLLGTLAKLQECHTATPSHMSAPRAGNSRRQEEGGTAGASRFK 528
Score = 39.1 bits (79), Expect(3) = 3e-055
Identities = 17/26 (65%), Positives = 18/26 (69%)
Frame = -2 / -2
Query: 585 SYPSSEHKAWCGCEALLVQARSA*QL 508
S P S H AWCGC ALL +SA*QL
Sbjct: 477 SCPWSGHMAWCGCVALLELCQSA*QL 400
Score = 26.3 bits (51), Expect(3) = 3e-055
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = -2 / -3
Query: 132 TWAPCAW 112
TWAPCAW
Sbjct: 23 TWAPCAW 3
Score = 23.5 bits (45), Expect(3) = 4e-041
Identities = 9/10 (90%), Positives = 9/10 (90%)
Frame = +2 / +1
Query: 110 DQAHGAQVRR 139
DQAHGAQV R
Sbjct: 1 DQAHGAQVGR 30
>gb|BU982839.1|BU982839 HA27M06r HA Hordeum vulgare subsp. vulgare cDNA clone HA27M06
5-PRIME, mRNA sequence
Length = 619
Score = 225 bits (485), Expect(2) = e-101
Identities = 91/102 (89%), Positives = 97/102 (95%)
Frame = +3 / +2
Query: 303 IAVIVGTVTDDKRISEVPAMKVCALRFTETARARIINAGGECLTFDQLALRAPLGQNTVL 482
IAV+VGT+TDD RI E+PAMKV ALRFTETARARI+NAGGECLTFDQLALRAP G+NT+L
Sbjct: 314 IAVVVGTITDDMRIQEIPAMKVTALRFTETARARIVNAGGECLTFDQLALRAPTGENTIL 493
Query: 483 LRGPKNAREAVRHFGPAPGVPHSHTKPYVRSKGRKFEKARGR 608
LRGPKNAREAVRHFG APGVPHSHTKPYVRSKGRKFEKARGR
Sbjct: 494 LRGPKNAREAVRHFGKAPGVPHSHTKPYVRSKGRKFEKARGR 619
Score = 162 bits (349), Expect(2) = e-101
Identities = 70/83 (84%), Positives = 75/83 (90%)
Frame = +3 / +2
Query: 69 AMGIDLVAGGRNKKTKRTAPKSDDVYLKLLVKLYRFLVRRTKSNFNAVILKRLFMSKTNR 248
AMGIDLVAGGRNK+TKR APKSDDVYLKLLVKLYRFLVRRTKS FNAVILKRLFMSKTNR
Sbjct: 77 AMGIDLVAGGRNKRTKRVAPKSDDVYLKLLVKLYRFLVRRTKSKFNAVILKRLFMSKTNR 256
Query: 249 PPLSMRRLVRFMEGKGDQIAVIV 317
PPLSMRRL FM+GK ++ +V
Sbjct: 257 PPLSMRRLSNFMKGKEEKNIAVV 325
Score = 160 bits (344), Expect(3) = 2e-060
Identities = 73/91 (80%), Positives = 76/91 (83%)
Frame = -1 / -2
Query: 574 ERT*GLVWL*GTPGAGPKCLTASLAFLGPLSRTVFCPSGARSASWSKVRHSPPALMILAL 395
ERT*GLVWL GTPGA PKCLTAS AFLGPL+R VF P GAR ASWSKVRHSPPAL ILAL
Sbjct: 585 ERT*GLVWLCGTPGALPKCLTASRAFLGPLNRIVFSPVGARRASWSKVRHSPPALTILAL 406
Query: 394 AVSVNLSAQTFIAGTSLILLSSVTVPTITAI 302
AVSVNL A TFIAG S I +SSV VPT TA+
Sbjct: 405 AVSVNLRAVTFIAGISWIRMSSVIVPTTTAM 313
Score = 128 bits (275), Expect = 3e-029
Identities = 56/106 (52%), Positives = 73/106 (68%)
Frame = -3 / -1
Query: 608 PSSRLLKLPTLRANIRLGVAVRHSWCRPEVPDSFPSVLRTPQQNRVLPKWGTERELVEGE 429
P++ LLKLPTL A+I LGVAVRH+ EVP +L +PQQ+RVLP W TE +LV+ E
Sbjct: 619 PTTSLLKLPTLGAHIGLGVAVRHTRSLAEVPHRLTGILGSPQQDRVLPSWSTESKLVKSE 440
Query: 428 ALSASIDDPGPRCLSEPERADLHRRHLADPLVVGHGAHNHGDLITL 291
AL SID+P PRCL EP+ +LH L DP V+ A+NH +++ L
Sbjct: 439 ALPTSIDNPCPRCLCEPQSGNLHCWDLLDPHVICDCANNHSNVLLL 302
Score = 92.7 bits (196), Expect(3) = 1e-027
Identities = 48/89 (53%), Positives = 51/89 (57%)
Frame = -1 / -2
Query: 334 SSVTVPTITAI*SPFPSMNLTRRRIESGGRLVLLMKRRLRITALKLLFVXXXXXXXXXXX 155
S + T S FP M L RRR+ESGGRLVLLMK LR+TAL LL V
Sbjct: 342 SVIVPTTTAMFFSSFPFMKLERRRMESGGRLVLLMKSLLRMTALNLLLVLLTRKR*SLTR 163
Query: 154 XXXXXXSDLGAVRLVFLLRPPATRSIPMA 68
SDLGA RLV L PPATRSIPMA
Sbjct: 162 SLRYTSSDLGATRLVLLFLPPATRSIPMA 76
Score = 73.0 bits (153), Expect(4) = 4e-030
Identities = 27/54 (50%), Positives = 33/54 (61%)
Frame = +2 / +1
Query: 314 CGHRDRRQEDQRGAGDEGLRAQVH*DSEGQDHQCWRRVPHLRPARAPCPTWAKH 475
C H R D R +EG R++VH DSEG+D QCW VPH PA +PC W +H
Sbjct: 325 CWHNHR*HADPRDPSNEGYRSEVHRDSEGKDCQCWWGVPHF*PACSPCSNWGEH 486
Score = 69.8 bits (146), Expect(3) = 2e-060
Identities = 30/43 (69%), Positives = 33/43 (76%)
Frame = -3 / -1
Query: 302 LITLPLHEPDEAAHRERRAVGLAHEEALEDHGVEVALCPAHKE 174
L+ L LHE E AH ERRAVGLAHEE LED GVE+AL P H+E
Sbjct: 310 LLLLSLHEVGETAHGERRAVGLAHEEPLEDDGVELALGPPHQE 182
Score = 47.8 bits (98), Expect(4) = 4e-030
Identities = 27/48 (56%), Positives = 29/48 (60%)
Frame = +1 / +3
Query: 454 VPHLGKTRFC*GVLRTLGKLSGTSGLHQECLTATPSLMFARRVGSLRR 597
V LG+TR C*G R + GTS C TATPS M A RVGSLRR
Sbjct: 465 VLQLGRTRSC*GDPRMPVRR*GTSARLLVCRTATPSPMCAPRVGSLRR 608
Score = 41.8 bits (85), Expect(3) = 1e-027
Identities = 16/25 (64%), Positives = 17/25 (68%)
Frame = -2 / -3
Query: 591 QTSYPSSEHKAWCGCEALLVQARSA 517
QTSYP S H+AWCGC A RSA
Sbjct: 602 QTSYPWSAHRAWCGCAAHQEPCRSA 528
Score = 41.4 bits (84), Expect(3) = 2e-060
Identities = 14/21 (66%), Positives = 15/21 (71%)
Frame = -2 / -3
Query: 132 TWAPCAWSSCCGRRLRDRYPW 70
TWA AWSSC R+ R RYPW
Sbjct: 140 TWARRAWSSCSSRQRRGRYPW 78
Score = 35.4 bits (71), Expect(4) = 4e-030
Identities = 15/36 (41%), Positives = 19/36 (52%)
Frame = +2 / +1
Query: 188 DKEQLQRRDPQAPLHEXXXXXXXXXXXXRQVHGGEG 295
D+EQ+QRR PQ LHE Q+H G+G
Sbjct: 196 DQEQVQRRHPQEALHEQDQPPAALHAPSLQLHEGKG 303
Score = 30.4 bits (60), Expect(4) = 4e-030
Identities = 13/23 (56%), Positives = 14/23 (60%)
Frame = +2 / +1
Query: 71 HGYXXXXXXPQQEDQAHGAQVRR 139
HGY +QEDQA AQVRR
Sbjct: 79 HGYRPRRWREEQEDQARRAQVRR 147
Score = 26.7 bits (52), Expect(3) = 1e-027
Identities = 17/37 (45%), Positives = 18/37 (48%)
Frame = -2 / -3
Query: 489 PSAEPCFAQVGHXXXXXXXXGTLRQH**SWPSLSQ*T 379
PS C Q+ H GT QH* S PSLS *T
Sbjct: 500 PSTGSCSPQLEHGEQAGQK*GTPHQH*QSLPSLSL*T 390
>gb|BQ458700.1|BQ458700 HA04H18r HA Hordeum vulgare subsp. vulgare cDNA clone HA04H18
5-PRIME, mRNA sequence
Length = 616
Score = 225 bits (485), Expect(2) = e-101
Identities = 91/102 (89%), Positives = 97/102 (95%)
Frame = +3 / +2
Query: 303 IAVIVGTVTDDKRISEVPAMKVCALRFTETARARIINAGGECLTFDQLALRAPLGQNTVL 482
IAV+VGT+TDD RI E+PAMKV ALRFTETARARI+NAGGECLTFDQLALRAP G+NT+L
Sbjct: 311 IAVVVGTITDDMRIQEIPAMKVTALRFTETARARIVNAGGECLTFDQLALRAPTGENTIL 490
Query: 483 LRGPKNAREAVRHFGPAPGVPHSHTKPYVRSKGRKFEKARGR 608
LRGPKNAREAVRHFG APGVPHSHTKPYVRSKGRKFEKARGR
Sbjct: 491 LRGPKNAREAVRHFGKAPGVPHSHTKPYVRSKGRKFEKARGR 616
Score = 162 bits (349), Expect(2) = e-101
Identities = 70/83 (84%), Positives = 75/83 (90%)
Frame = +3 / +2
Query: 69 AMGIDLVAGGRNKKTKRTAPKSDDVYLKLLVKLYRFLVRRTKSNFNAVILKRLFMSKTNR 248
AMGIDLVAGGRNK+TKR APKSDDVYLKLLVKLYRFLVRRTKS FNAVILKRLFMSKTNR
Sbjct: 74 AMGIDLVAGGRNKRTKRVAPKSDDVYLKLLVKLYRFLVRRTKSKFNAVILKRLFMSKTNR 253
Query: 249 PPLSMRRLVRFMEGKGDQIAVIV 317
PPLSMRRL FM+GK ++ +V
Sbjct: 254 PPLSMRRLSNFMKGKEEKNIAVV 322
Score = 160 bits (344), Expect(3) = 2e-060
Identities = 73/91 (80%), Positives = 76/91 (83%)
Frame = -1 / -2
Query: 574 ERT*GLVWL*GTPGAGPKCLTASLAFLGPLSRTVFCPSGARSASWSKVRHSPPALMILAL 395
ERT*GLVWL GTPGA PKCLTAS AFLGPL+R VF P GAR ASWSKVRHSPPAL ILAL
Sbjct: 582 ERT*GLVWLCGTPGALPKCLTASRAFLGPLNRIVFSPVGARRASWSKVRHSPPALTILAL 403
Query: 394 AVSVNLSAQTFIAGTSLILLSSVTVPTITAI 302
AVSVNL A TFIAG S I +SSV VPT TA+
Sbjct: 402 AVSVNLRAVTFIAGISWIRMSSVIVPTTTAM 310
Score = 128 bits (275), Expect = 3e-029
Identities = 56/106 (52%), Positives = 73/106 (68%)
Frame = -3 / -1
Query: 608 PSSRLLKLPTLRANIRLGVAVRHSWCRPEVPDSFPSVLRTPQQNRVLPKWGTERELVEGE 429
P++ LLKLPTL A+I LGVAVRH+ EVP +L +PQQ+RVLP W TE +LV+ E
Sbjct: 616 PTTSLLKLPTLGAHIGLGVAVRHTRSLAEVPHRLTGILGSPQQDRVLPSWSTESKLVKSE 437
Query: 428 ALSASIDDPGPRCLSEPERADLHRRHLADPLVVGHGAHNHGDLITL 291
AL SID+P PRCL EP+ +LH L DP V+ A+NH +++ L
Sbjct: 436 ALPTSIDNPCPRCLCEPQSGNLHCWDLLDPHVICDCANNHSNVLLL 299
Score = 92.7 bits (196), Expect(3) = 1e-027
Identities = 48/89 (53%), Positives = 51/89 (57%)
Frame = -1 / -2
Query: 334 SSVTVPTITAI*SPFPSMNLTRRRIESGGRLVLLMKRRLRITALKLLFVXXXXXXXXXXX 155
S + T S FP M L RRR+ESGGRLVLLMK LR+TAL LL V
Sbjct: 339 SVIVPTTTAMFFSSFPFMKLERRRMESGGRLVLLMKSLLRMTALNLLLVLLTRKR*SLTR 160
Query: 154 XXXXXXSDLGAVRLVFLLRPPATRSIPMA 68
SDLGA RLV L PPATRSIPMA
Sbjct: 159 SLRYTSSDLGATRLVLLFLPPATRSIPMA 73
Score = 73.0 bits (153), Expect(4) = 4e-030
Identities = 27/54 (50%), Positives = 33/54 (61%)
Frame = +2 / +1
Query: 314 CGHRDRRQEDQRGAGDEGLRAQVH*DSEGQDHQCWRRVPHLRPARAPCPTWAKH 475
C H R D R +EG R++VH DSEG+D QCW VPH PA +PC W +H
Sbjct: 322 CWHNHR*HADPRDPSNEGYRSEVHRDSEGKDCQCWWGVPHF*PACSPCSNWGEH 483
Score = 69.8 bits (146), Expect(3) = 2e-060
Identities = 30/43 (69%), Positives = 33/43 (76%)
Frame = -3 / -1
Query: 302 LITLPLHEPDEAAHRERRAVGLAHEEALEDHGVEVALCPAHKE 174
L+ L LHE E AH ERRAVGLAHEE LED GVE+AL P H+E
Sbjct: 307 LLLLSLHEVGETAHGERRAVGLAHEEPLEDDGVELALGPPHQE 179
Score = 47.8 bits (98), Expect(4) = 4e-030
Identities = 27/48 (56%), Positives = 29/48 (60%)
Frame = +1 / +3
Query: 454 VPHLGKTRFC*GVLRTLGKLSGTSGLHQECLTATPSLMFARRVGSLRR 597
V LG+TR C*G R + GTS C TATPS M A RVGSLRR
Sbjct: 462 VLQLGRTRSC*GDPRMPVRR*GTSARLLVCRTATPSPMCAPRVGSLRR 605
Score = 41.8 bits (85), Expect(3) = 1e-027
Identities = 16/25 (64%), Positives = 17/25 (68%)
Frame = -2 / -3
Query: 591 QTSYPSSEHKAWCGCEALLVQARSA 517
QTSYP S H+AWCGC A RSA
Sbjct: 599 QTSYPWSAHRAWCGCAAHQEPCRSA 525
Score = 41.4 bits (84), Expect(3) = 2e-060
Identities = 14/21 (66%), Positives = 15/21 (71%)
Frame = -2 / -3
Query: 132 TWAPCAWSSCCGRRLRDRYPW 70
TWA AWSSC R+ R RYPW
Sbjct: 137 TWARRAWSSCSSRQRRGRYPW 75
Score = 35.4 bits (71), Expect(4) = 4e-030
Identities = 15/36 (41%), Positives = 19/36 (52%)
Frame = +2 / +1
Query: 188 DKEQLQRRDPQAPLHEXXXXXXXXXXXXRQVHGGEG 295
D+EQ+QRR PQ LHE Q+H G+G
Sbjct: 193 DQEQVQRRHPQEALHEQDQPPAALHAPSLQLHEGKG 300
Score = 30.4 bits (60), Expect(4) = 4e-030
Identities = 13/23 (56%), Positives = 14/23 (60%)
Frame = +2 / +1
Query: 71 HGYXXXXXXPQQEDQAHGAQVRR 139
HGY +QEDQA AQVRR
Sbjct: 76 HGYRPRRWREEQEDQARRAQVRR 144
Score = 26.7 bits (52), Expect(3) = 1e-027
Identities = 17/37 (45%), Positives = 18/37 (48%)
Frame = -2 / -3
Query: 489 PSAEPCFAQVGHXXXXXXXXGTLRQH**SWPSLSQ*T 379
PS C Q+ H GT QH* S PSLS *T
Sbjct: 497 PSTGSCSPQLEHGEQAGQK*GTPHQH*QSLPSLSL*T 387
>gb|AV933195.1|AV933195 AV933195 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal5m06 5', mRNA sequence
Length = 612
Score = 225 bits (485), Expect(2) = e-101
Identities = 91/102 (89%), Positives = 97/102 (95%)
Frame = +3 / +2
Query: 303 IAVIVGTVTDDKRISEVPAMKVCALRFTETARARIINAGGECLTFDQLALRAPLGQNTVL 482
IAV+VGT+TDD RI E+PAMKV ALRFTETARARI+NAGGECLTFDQLALRAP G+NT+L
Sbjct: 305 IAVVVGTITDDMRIQEIPAMKVTALRFTETARARIVNAGGECLTFDQLALRAPTGENTIL 484
Query: 483 LRGPKNAREAVRHFGPAPGVPHSHTKPYVRSKGRKFEKARGR 608
LRGPKNAREAVRHFG APGVPHSHTKPYVRSKGRKFEKARGR
Sbjct: 485 LRGPKNAREAVRHFGKAPGVPHSHTKPYVRSKGRKFEKARGR 610
Score = 162 bits (349), Expect(2) = e-101
Identities = 70/83 (84%), Positives = 75/83 (90%)
Frame = +3 / +2
Query: 69 AMGIDLVAGGRNKKTKRTAPKSDDVYLKLLVKLYRFLVRRTKSNFNAVILKRLFMSKTNR 248
AMGIDLVAGGRNK+TKR APKSDDVYLKLLVKLYRFLVRRTKS FNAVILKRLFMSKTNR
Sbjct: 68 AMGIDLVAGGRNKRTKRVAPKSDDVYLKLLVKLYRFLVRRTKSKFNAVILKRLFMSKTNR 247
Query: 249 PPLSMRRLVRFMEGKGDQIAVIV 317
PPLSMRRL FM+GK ++ +V
Sbjct: 248 PPLSMRRLSNFMKGKEEKNIAVV 316
Score = 160 bits (344), Expect(3) = 2e-060
Identities = 73/91 (80%), Positives = 76/91 (83%)
Frame = -1 / -1
Query: 574 ERT*GLVWL*GTPGAGPKCLTASLAFLGPLSRTVFCPSGARSASWSKVRHSPPALMILAL 395
ERT*GLVWL GTPGA PKCLTAS AFLGPL+R VF P GAR ASWSKVRHSPPAL ILAL
Sbjct: 576 ERT*GLVWLCGTPGALPKCLTASRAFLGPLNRIVFSPVGARRASWSKVRHSPPALTILAL 397
Query: 394 AVSVNLSAQTFIAGTSLILLSSVTVPTITAI 302
AVSVNL A TFIAG S I +SSV VPT TA+
Sbjct: 396 AVSVNLRAVTFIAGISWIRMSSVIVPTTTAM 304
Score = 128 bits (275), Expect = 3e-029
Identities = 56/106 (52%), Positives = 73/106 (68%)
Frame = -3 / -3
Query: 608 PSSRLLKLPTLRANIRLGVAVRHSWCRPEVPDSFPSVLRTPQQNRVLPKWGTERELVEGE 429
P++ LLKLPTL A+I LGVAVRH+ EVP +L +PQQ+RVLP W TE +LV+ E
Sbjct: 610 PTTSLLKLPTLGAHIGLGVAVRHTRSLAEVPHRLTGILGSPQQDRVLPSWSTESKLVKSE 431
Query: 428 ALSASIDDPGPRCLSEPERADLHRRHLADPLVVGHGAHNHGDLITL 291
AL SID+P PRCL EP+ +LH L DP V+ A+NH +++ L
Sbjct: 430 ALPTSIDNPCPRCLCEPQSGNLHCWDLLDPHVICDCANNHSNVLLL 293
Score = 92.7 bits (196), Expect(3) = 1e-027
Identities = 48/89 (53%), Positives = 51/89 (57%)
Frame = -1 / -1
Query: 334 SSVTVPTITAI*SPFPSMNLTRRRIESGGRLVLLMKRRLRITALKLLFVXXXXXXXXXXX 155
S + T S FP M L RRR+ESGGRLVLLMK LR+TAL LL V
Sbjct: 333 SVIVPTTTAMFFSSFPFMKLERRRMESGGRLVLLMKSLLRMTALNLLLVLLTRKR*SLTR 154
Query: 154 XXXXXXSDLGAVRLVFLLRPPATRSIPMA 68
SDLGA RLV L PPATRSIPMA
Sbjct: 153 SLRYTSSDLGATRLVLLFLPPATRSIPMA 67
Score = 73.0 bits (153), Expect(4) = 4e-030
Identities = 27/54 (50%), Positives = 33/54 (61%)
Frame = +2 / +1
Query: 314 CGHRDRRQEDQRGAGDEGLRAQVH*DSEGQDHQCWRRVPHLRPARAPCPTWAKH 475
C H R D R +EG R++VH DSEG+D QCW VPH PA +PC W +H
Sbjct: 316 CWHNHR*HADPRDPSNEGYRSEVHRDSEGKDCQCWWGVPHF*PACSPCSNWGEH 477
Score = 69.8 bits (146), Expect(3) = 2e-060
Identities = 30/43 (69%), Positives = 33/43 (76%)
Frame = -3 / -3
Query: 302 LITLPLHEPDEAAHRERRAVGLAHEEALEDHGVEVALCPAHKE 174
L+ L LHE E AH ERRAVGLAHEE LED GVE+AL P H+E
Sbjct: 301 LLLLSLHEVGETAHGERRAVGLAHEEPLEDDGVELALGPPHQE 173
Score = 47.8 bits (98), Expect(4) = 4e-030
Identities = 27/48 (56%), Positives = 29/48 (60%)
Frame = +1 / +3
Query: 454 VPHLGKTRFC*GVLRTLGKLSGTSGLHQECLTATPSLMFARRVGSLRR 597
V LG+TR C*G R + GTS C TATPS M A RVGSLRR
Sbjct: 456 VLQLGRTRSC*GDPRMPVRR*GTSARLLVCRTATPSPMCAPRVGSLRR 599
Score = 41.8 bits (85), Expect(3) = 1e-027
Identities = 16/25 (64%), Positives = 17/25 (68%)
Frame = -2 / -2
Query: 591 QTSYPSSEHKAWCGCEALLVQARSA 517
QTSYP S H+AWCGC A RSA
Sbjct: 593 QTSYPWSAHRAWCGCAAHQEPCRSA 519
Score = 41.4 bits (84), Expect(3) = 2e-060
Identities = 14/21 (66%), Positives = 15/21 (71%)
Frame = -2 / -2
Query: 132 TWAPCAWSSCCGRRLRDRYPW 70
TWA AWSSC R+ R RYPW
Sbjct: 131 TWARRAWSSCSSRQRRGRYPW 69
Score = 35.4 bits (71), Expect(4) = 4e-030
Identities = 15/36 (41%), Positives = 19/36 (52%)
Frame = +2 / +1
Query: 188 DKEQLQRRDPQAPLHEXXXXXXXXXXXXRQVHGGEG 295
D+EQ+QRR PQ LHE Q+H G+G
Sbjct: 187 DQEQVQRRHPQEALHEQDQPPAALHAPSLQLHEGKG 294
Score = 30.4 bits (60), Expect(4) = 4e-030
Identities = 13/23 (56%), Positives = 14/23 (60%)
Frame = +2 / +1
Query: 71 HGYXXXXXXPQQEDQAHGAQVRR 139
HGY +QEDQA AQVRR
Sbjct: 70 HGYRPRRWREEQEDQARRAQVRR 138
Score = 26.7 bits (52), Expect(3) = 1e-027
Identities = 17/37 (45%), Positives = 18/37 (48%)
Frame = -2 / -2
Query: 489 PSAEPCFAQVGHXXXXXXXXGTLRQH**SWPSLSQ*T 379
PS C Q+ H GT QH* S PSLS *T
Sbjct: 491 PSTGSCSPQLEHGEQAGQK*GTPHQH*QSLPSLSL*T 381
>gb|BG343542.1|BG343542 HVSMEg0006F12f Hordeum vulgare pre-anthesis spike EST library
HVcDNA0008 (white to yellow anther) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEg0006F12f, mRNA sequence
Length = 995
Score = 199 bits (430), Expect(3) = e-100
Identities = 80/92 (86%), Positives = 87/92 (94%)
Frame = +3 / +2
Query: 303 IAVIVGTVTDDKRISEVPAMKVCALRFTETARARIINAGGECLTFDQLALRAPLGQNTVL 482
IAV+VGT+TDD RI E+PAMKV ALRFTETARARI+NAGGECLTFDQLALRAP G+NT+L
Sbjct: 308 IAVVVGTITDDMRIQEIPAMKVTALRFTETARARIVNAGGECLTFDQLALRAPTGENTIL 487
Query: 483 LRGPKNAREAVRHFGPAPGVPHSHTKPYVRSK 578
LRGPKNAREAVRHFG APGVPHSHTKPYVRS+
Sbjct: 488 LRGPKNAREAVRHFGKAPGVPHSHTKPYVRSR 583
Score = 162 bits (349), Expect(3) = e-100
Identities = 70/83 (84%), Positives = 75/83 (90%)
Frame = +3 / +2
Query: 69 AMGIDLVAGGRNKKTKRTAPKSDDVYLKLLVKLYRFLVRRTKSNFNAVILKRLFMSKTNR 248
AMGIDLVAGGRNK+TKR APKSDDVYLKLLVKLYRFLVRRTKS FNAVILKRLFMSKTNR
Sbjct: 71 AMGIDLVAGGRNKRTKRVAPKSDDVYLKLLVKLYRFLVRRTKSKFNAVILKRLFMSKTNR 250
Query: 249 PPLSMRRLVRFMEGKGDQIAVIV 317
PPLSMRRL FM+GK ++ +V
Sbjct: 251 PPLSMRRLSNFMKGKEEKNIAVV 319
Score = 160 bits (344), Expect(4) = 1e-064
Identities = 73/91 (80%), Positives = 76/91 (83%)
Frame = -1 / -3
Query: 574 ERT*GLVWL*GTPGAGPKCLTASLAFLGPLSRTVFCPSGARSASWSKVRHSPPALMILAL 395
ERT*GLVWL GTPGA PKCLTAS AFLGPL+R VF P GAR ASWSKVRHSPPAL ILAL
Sbjct: 579 ERT*GLVWLCGTPGALPKCLTASRAFLGPLNRIVFSPVGARRASWSKVRHSPPALTILAL 400
Query: 394 AVSVNLSAQTFIAGTSLILLSSVTVPTITAI 302
AVSVNL A TFIAG S I +SSV VPT TA+
Sbjct: 399 AVSVNLRAVTFIAGISWIRMSSVIVPTTTAM 307
Score = 111 bits (236), Expect = 8e-024
Identities = 48/94 (51%), Positives = 63/94 (67%)
Frame = -3 / -2
Query: 572 ANIRLGVAVRHSWCRPEVPDSFPSVLRTPQQNRVLPKWGTERELVEGEALSASIDDPGPR 393
A+I LGVAVRH+ EVP +L +PQQ+RVLP W TE +LV+ EAL SID+P PR
Sbjct: 577 AHIGLGVAVRHTRSLAEVPHRLTGILGSPQQDRVLPSWSTESKLVKSEALPTSIDNPCPR 398
Query: 392 CLSEPERADLHRRHLADPLVVGHGAHNHGDLITL 291
CL EP+ +LH L DP V+ A+NH +++ L
Sbjct: 397 CLCEPQSGNLHCWDLLDPHVICDCANNHSNVLLL 296
Score = 92.7 bits (196), Expect(3) = 7e-025
Identities = 48/89 (53%), Positives = 51/89 (57%)
Frame = -1 / -3
Query: 334 SSVTVPTITAI*SPFPSMNLTRRRIESGGRLVLLMKRRLRITALKLLFVXXXXXXXXXXX 155
S + T S FP M L RRR+ESGGRLVLLMK LR+TAL LL V
Sbjct: 336 SVIVPTTTAMFFSSFPFMKLERRRMESGGRLVLLMKSLLRMTALNLLLVLLTRKR*SLTR 157
Query: 154 XXXXXXSDLGAVRLVFLLRPPATRSIPMA 68
SDLGA RLV L PPATRSIPMA
Sbjct: 156 SLRYTSSDLGATRLVLLFLPPATRSIPMA 70
Score = 73.0 bits (153), Expect(5) = 1e-029
Identities = 27/54 (50%), Positives = 33/54 (61%)
Frame = +2 / +1
Query: 314 CGHRDRRQEDQRGAGDEGLRAQVH*DSEGQDHQCWRRVPHLRPARAPCPTWAKH 475
C H R D R +EG R++VH DSEG+D QCW VPH PA +PC W +H
Sbjct: 319 CWHNHR*HADPRDPSNEGYRSEVHRDSEGKDCQCWWGVPHF*PACSPCSNWGEH 480
Score = 69.8 bits (146), Expect(4) = 1e-064
Identities = 30/43 (69%), Positives = 33/43 (76%)
Frame = -3 / -2
Query: 302 LITLPLHEPDEAAHRERRAVGLAHEEALEDHGVEVALCPAHKE 174
L+ L LHE E AH ERRAVGLAHEE LED GVE+AL P H+E
Sbjct: 304 LLLLSLHEVGETAHGERRAVGLAHEEPLEDDGVELALGPPHQE 176
Score = 42.8 bits (87), Expect(3) = e-100
Identities = 16/18 (88%), Positives = 18/18 (100%)
Frame = +3 / +1
Query: 576 KGRKFEKARGRRNSRGFK 629
+GRKFEKARGRRNSRGF+
Sbjct: 580 QGRKFEKARGRRNSRGFR 633
Score = 41.4 bits (84), Expect(4) = 1e-064
Identities = 14/21 (66%), Positives = 15/21 (71%)
Frame = -2 / -1
Query: 132 TWAPCAWSSCCGRRLRDRYPW 70
TWA AWSSC R+ R RYPW
Sbjct: 134 TWARRAWSSCSSRQRRGRYPW 72
Score = 35.4 bits (71), Expect(5) = 1e-029
Identities = 15/36 (41%), Positives = 19/36 (52%)
Frame = +2 / +1
Query: 188 DKEQLQRRDPQAPLHEXXXXXXXXXXXXRQVHGGEG 295
D+EQ+QRR PQ LHE Q+H G+G
Sbjct: 190 DQEQVQRRHPQEALHEQDQPPAALHAPSLQLHEGKG 297
Score = 33.6 bits (67), Expect(5) = 1e-029
Identities = 20/40 (50%), Positives = 22/40 (55%)
Frame = +1 / +3
Query: 454 VPHLGKTRFC*GVLRTLGKLSGTSGLHQECLTATPSLMFA 573
V LG+TR C*G R + GTS C TATPS M A
Sbjct: 459 VLQLGRTRSC*GDPRMPVRR*GTSARLLVCRTATPSPMCA 578
Score = 32.2 bits (64), Expect(3) = 7e-025
Identities = 12/21 (57%), Positives = 13/21 (61%)
Frame = -2 / -1
Query: 579 PSSEHKAWCGCEALLVQARSA 517
P S H+AWCGC A RSA
Sbjct: 584 PWSAHRAWCGCAAHQEPCRSA 522
Score = 32.2 bits (64), Expect(4) = 1e-064
Identities = 13/17 (76%), Positives = 15/17 (88%)
Frame = -3 / -3
Query: 626 EAPAVPPSSRLLKLPTL 576
EA AVPP++ LLKLPTL
Sbjct: 630 EATAVPPTTSLLKLPTL 580
Score = 30.4 bits (60), Expect(5) = 1e-029
Identities = 13/23 (56%), Positives = 14/23 (60%)
Frame = +2 / +1
Query: 71 HGYXXXXXXPQQEDQAHGAQVRR 139
HGY +QEDQA AQVRR
Sbjct: 73 HGYRPRRWREEQEDQARRAQVRR 141
Score = 29.5 bits (58), Expect(5) = 1e-029
Identities = 15/22 (68%), Positives = 15/22 (68%)
Frame = +1 / +2
Query: 577 RVGSLRRREEGGTAGASRSKWP 642
RVGSLRR GGTA AS K P
Sbjct: 581 RVGSLRRLVVGGTAVASGVKVP 646
Score = 26.7 bits (52), Expect(3) = 7e-025
Identities = 17/37 (45%), Positives = 18/37 (48%)
Frame = -2 / -1
Query: 489 PSAEPCFAQVGHXXXXXXXXGTLRQH**SWPSLSQ*T 379
PS C Q+ H GT QH* S PSLS *T
Sbjct: 494 PSTGSCSPQLEHGEQAGQK*GTPHQH*QSLPSLSL*T 384
>gb|CV061335.1|CV061335 BNEL67f4 Barley EST endosperm library Hordeum vulgare subsp.
vulgare cDNA clone BNEL67f4 5' similar to cytoplasmic
ribosomal protein L18, mRNA sequence
Length = 633
Score = 223 bits (481), Expect(2) = e-100
Identities = 91/104 (87%), Positives = 97/104 (93%)
Frame = +3 / +3
Query: 303 IAVIVGTVTDDKRISEVPAMKVCALRFTETARARIINAGGECLTFDQLALRAPLGQNTVL 482
IAV+VGT+TDD RI E+PAMKV ALRFTETARARI+NAGGECLTFDQLALRAP G+NT+L
Sbjct: 321 IAVVVGTITDDMRIQEIPAMKVTALRFTETARARIVNAGGECLTFDQLALRAPTGENTIL 500
Query: 483 LRGPKNAREAVRHFGPAPGVPHSHTKPYVRSKGRKFEKARGRRN 614
LRGPKNAREAVRHFG A GVPHSHTKPYVRSKGRK EKARGRRN
Sbjct: 501 LRGPKNAREAVRHFGKASGVPHSHTKPYVRSKGRKXEKARGRRN 632
Score = 162 bits (349), Expect(2) = e-100
Identities = 70/83 (84%), Positives = 75/83 (90%)
Frame = +3 / +3
Query: 69 AMGIDLVAGGRNKKTKRTAPKSDDVYLKLLVKLYRFLVRRTKSNFNAVILKRLFMSKTNR 248
AMGIDLVAGGRNK+TKR APKSDDVYLKLLVKLYRFLVRRTKS FNAVILKRLFMSKTNR
Sbjct: 84 AMGIDLVAGGRNKRTKRVAPKSDDVYLKLLVKLYRFLVRRTKSKFNAVILKRLFMSKTNR 263
Query: 249 PPLSMRRLVRFMEGKGDQIAVIV 317
PPLSMRRL FM+GK ++ +V
Sbjct: 264 PPLSMRRLSNFMKGKEEKNIAVV 332
Score = 156 bits (336), Expect(3) = 3e-059
Identities = 72/91 (79%), Positives = 75/91 (82%)
Frame = -1 / -3
Query: 574 ERT*GLVWL*GTPGAGPKCLTASLAFLGPLSRTVFCPSGARSASWSKVRHSPPALMILAL 395
ERT*GLVWL GTP A PKCLTAS AFLGPL+R VF P GAR ASWSKVRHSPPAL ILAL
Sbjct: 592 ERT*GLVWLCGTPEALPKCLTASRAFLGPLNRIVFSPVGARRASWSKVRHSPPALTILAL 413
Query: 394 AVSVNLSAQTFIAGTSLILLSSVTVPTITAI 302
AVSVNL A TFIAG S I +SSV VPT TA+
Sbjct: 412 AVSVNLRAVTFIAGISWIRMSSVIVPTTTAM 320
Score = 131 bits (280), Expect = 6e-030
Identities = 57/108 (52%), Positives = 74/108 (68%)
Frame = -3 / -2
Query: 614 VPPSSRLLKLPTLRANIRLGVAVRHSWCRPEVPDSFPSVLRTPQQNRVLPKWGTERELVE 435
VPP++ LL LPTL A+I LGVAVRH+ EVP +L +PQQ+RVLP W TE +LV+
Sbjct: 632 VPPTTSLLXLPTLGAHIGLGVAVRHTRSLAEVPHRLTGILGSPQQDRVLPSWSTESKLVK 453
Query: 434 GEALSASIDDPGPRCLSEPERADLHRRHLADPLVVGHGAHNHGDLITL 291
EAL SID+P PRCL EP+ +LH L DP V+ A+NH +++ L
Sbjct: 452 SEALPTSIDNPCPRCLCEPQSGNLHCWDLLDPHVICDCANNHSNVLLL 309
Score = 92.7 bits (196), Expect(3) = 5e-027
Identities = 48/89 (53%), Positives = 51/89 (57%)
Frame = -1 / -3
Query: 334 SSVTVPTITAI*SPFPSMNLTRRRIESGGRLVLLMKRRLRITALKLLFVXXXXXXXXXXX 155
S + T S FP M L RRR+ESGGRLVLLMK LR+TAL LL V
Sbjct: 349 SVIVPTTTAMFFSSFPFMKLERRRMESGGRLVLLMKSLLRMTALNLLLVLLTRKR*SLTR 170
Query: 154 XXXXXXSDLGAVRLVFLLRPPATRSIPMA 68
SDLGA RLV L PPATRSIPMA
Sbjct: 169 SLRYTSSDLGATRLVLLFLPPATRSIPMA 83
Score = 73.0 bits (153), Expect(4) = 7e-031
Identities = 27/54 (50%), Positives = 33/54 (61%)
Frame = +2 / +2
Query: 314 CGHRDRRQEDQRGAGDEGLRAQVH*DSEGQDHQCWRRVPHLRPARAPCPTWAKH 475
C H R D R +EG R++VH DSEG+D QCW VPH PA +PC W +H
Sbjct: 332 CWHNHR*HADPRDPSNEGYRSEVHRDSEGKDCQCWWGVPHF*PACSPCSNWGEH 493
Score = 69.8 bits (146), Expect(3) = 3e-059
Identities = 30/43 (69%), Positives = 33/43 (76%)
Frame = -3 / -2
Query: 302 LITLPLHEPDEAAHRERRAVGLAHEEALEDHGVEVALCPAHKE 174
L+ L LHE E AH ERRAVGLAHEE LED GVE+AL P H+E
Sbjct: 317 LLLLSLHEVGETAHGERRAVGLAHEEPLEDDGVELALGPPHQE 189
Score = 50.6 bits (104), Expect(4) = 7e-031
Identities = 29/54 (53%), Positives = 31/54 (57%)
Frame = +1 / +1
Query: 454 VPHLGKTRFC*GVLRTLGKLSGTSGLHQECLTATPSLMFARRVGSLRRREEGGT 615
V LG+TR C*G R + GTS C TATPS M A RVGS RR GGT
Sbjct: 472 VLQLGRTRSC*GDPRMPVRR*GTSARLLVCRTATPSPMCAPRVGSXRRLVVGGT 633
Score = 41.4 bits (84), Expect(3) = 3e-059
Identities = 14/21 (66%), Positives = 15/21 (71%)
Frame = -2 / -1
Query: 132 TWAPCAWSSCCGRRLRDRYPW 70
TWA AWSSC R+ R RYPW
Sbjct: 147 TWARRAWSSCSSRQRRGRYPW 85
Score = 39.6 bits (80), Expect(3) = 5e-027
Identities = 15/24 (62%), Positives = 16/24 (66%)
Frame = -2 / -1
Query: 588 TSYPSSEHKAWCGCEALLVQARSA 517
TSYP S H+AWCGC A RSA
Sbjct: 606 TSYPWSAHRAWCGCAAHQKPCRSA 535
Score = 35.4 bits (71), Expect(4) = 7e-031
Identities = 15/36 (41%), Positives = 19/36 (52%)
Frame = +2 / +2
Query: 188 DKEQLQRRDPQAPLHEXXXXXXXXXXXXRQVHGGEG 295
D+EQ+QRR PQ LHE Q+H G+G
Sbjct: 203 DQEQVQRRHPQEALHEQDQPPAALHAPSLQLHEGKG 310
Score = 30.4 bits (60), Expect(4) = 7e-031
Identities = 13/23 (56%), Positives = 14/23 (60%)
Frame = +2 / +2
Query: 71 HGYXXXXXXPQQEDQAHGAQVRR 139
HGY +QEDQA AQVRR
Sbjct: 86 HGYRPRRWREEQEDQARRAQVRR 154
Score = 26.7 bits (52), Expect(3) = 5e-027
Identities = 17/37 (45%), Positives = 18/37 (48%)
Frame = -2 / -1
Query: 489 PSAEPCFAQVGHXXXXXXXXGTLRQH**SWPSLSQ*T 379
PS C Q+ H GT QH* S PSLS *T
Sbjct: 507 PSTGSCSPQLEHGEQAGQK*GTPHQH*QSLPSLSL*T 397
>gb|BQ459597.1|BQ459597 HA08K13r HA Hordeum vulgare subsp. vulgare cDNA clone HA08K13
5-PRIME, mRNA sequence
Length = 550
Score = 230 bits (496), Expect(2) = e-100
Identities = 93/104 (89%), Positives = 99/104 (95%)
Frame = +3 / +2
Query: 303 IAVIVGTVTDDKRISEVPAMKVCALRFTETARARIINAGGECLTFDQLALRAPLGQNTVL 482
IAV+VGT+TDD RI E+PAMKV ALRFTETARARI+NAGGECLTFDQLALRAP G+NT+L
Sbjct: 239 IAVVVGTITDDMRIQEIPAMKVTALRFTETARARIVNAGGECLTFDQLALRAPTGENTIL 418
Query: 483 LRGPKNAREAVRHFGPAPGVPHSHTKPYVRSKGRKFEKARGRRN 614
LRGPKNAREAVRHFG APGVPHSHTKPYVRSKGRKFEKARGRRN
Sbjct: 419 LRGPKNAREAVRHFGKAPGVPHSHTKPYVRSKGRKFEKARGRRN 550
Score = 160 bits (344), Expect(3) = 5e-057
Identities = 73/91 (80%), Positives = 76/91 (83%)
Frame = -1 / -2
Query: 574 ERT*GLVWL*GTPGAGPKCLTASLAFLGPLSRTVFCPSGARSASWSKVRHSPPALMILAL 395
ERT*GLVWL GTPGA PKCLTAS AFLGPL+R VF P GAR ASWSKVRHSPPAL ILAL
Sbjct: 510 ERT*GLVWLCGTPGALPKCLTASRAFLGPLNRIVFSPVGARRASWSKVRHSPPALTILAL 331
Query: 394 AVSVNLSAQTFIAGTSLILLSSVTVPTITAI 302
AVSVNL A TFIAG S I +SSV VPT TA+
Sbjct: 330 AVSVNLRAVTFIAGISWIRMSSVIVPTTTAM 238
Score = 155 bits (334), Expect(2) = e-100
Identities = 67/80 (83%), Positives = 72/80 (90%)
Frame = +3 / +2
Query: 78 IDLVAGGRNKKTKRTAPKSDDVYLKLLVKLYRFLVRRTKSNFNAVILKRLFMSKTNRPPL 257
IDLVAGGRNK+TKR APKSDDVYLKLLVKLYRFLVRRTKS FNAVILKRLFMSKTNRPPL
Sbjct: 11 IDLVAGGRNKRTKRVAPKSDDVYLKLLVKLYRFLVRRTKSKFNAVILKRLFMSKTNRPPL 190
Query: 258 SMRRLVRFMEGKGDQIAVIV 317
SMRRL FM+GK ++ +V
Sbjct: 191 SMRRLSNFMKGKEEKNIAVV 250
Score = 133 bits (286), Expect = 1e-030
Identities = 58/108 (53%), Positives = 75/108 (69%)
Frame = -3 / -1
Query: 614 VPPSSRLLKLPTLRANIRLGVAVRHSWCRPEVPDSFPSVLRTPQQNRVLPKWGTERELVE 435
VPP++ LLKLPTL A+I LGVAVRH+ EVP +L +PQQ+RVLP W TE +LV+
Sbjct: 550 VPPTTSLLKLPTLGAHIGLGVAVRHTRSLAEVPHRLTGILGSPQQDRVLPSWSTESKLVK 371
Query: 434 GEALSASIDDPGPRCLSEPERADLHRRHLADPLVVGHGAHNHGDLITL 291
EAL SID+P PRCL EP+ +LH L DP V+ A+NH +++ L
Sbjct: 370 SEALPTSIDNPCPRCLCEPQSGNLHCWDLLDPHVICDCANNHSNVLLL 227
Score = 85.4 bits (180), Expect(3) = 1e-025
Identities = 45/86 (52%), Positives = 48/86 (55%)
Frame = -1 / -2
Query: 334 SSVTVPTITAI*SPFPSMNLTRRRIESGGRLVLLMKRRLRITALKLLFVXXXXXXXXXXX 155
S + T S FP M L RRR+ESGGRLVLLMK LR+TAL LL V
Sbjct: 267 SVIVPTTTAMFFSSFPFMKLERRRMESGGRLVLLMKSLLRMTALNLLLVLLTRKR*SLTR 88
Query: 154 XXXXXXSDLGAVRLVFLLRPPATRSI 77
SDLGA RLV L PPATRSI
Sbjct: 87 SLRYTSSDLGATRLVLLFLPPATRSI 10
Score = 73.0 bits (153), Expect(4) = 3e-029
Identities = 27/54 (50%), Positives = 33/54 (61%)
Frame = +2 / +1
Query: 314 CGHRDRRQEDQRGAGDEGLRAQVH*DSEGQDHQCWRRVPHLRPARAPCPTWAKH 475
C H R D R +EG R++VH DSEG+D QCW VPH PA +PC W +H
Sbjct: 250 CWHNHR*HADPRDPSNEGYRSEVHRDSEGKDCQCWWGVPHF*PACSPCSNWGEH 411
Score = 69.8 bits (146), Expect(3) = 5e-057
Identities = 30/43 (69%), Positives = 33/43 (76%)
Frame = -3 / -1
Query: 302 LITLPLHEPDEAAHRERRAVGLAHEEALEDHGVEVALCPAHKE 174
L+ L LHE E AH ERRAVGLAHEE LED GVE+AL P H+E
Sbjct: 235 LLLLSLHEVGETAHGERRAVGLAHEEPLEDDGVELALGPPHQE 107
Score = 50.6 bits (104), Expect(4) = 3e-029
Identities = 29/53 (54%), Positives = 31/53 (58%)
Frame = +1 / +3
Query: 454 VPHLGKTRFC*GVLRTLGKLSGTSGLHQECLTATPSLMFARRVGSLRRREEGG 612
V LG+TR C*G R + GTS C TATPS M A RVGSLRR GG
Sbjct: 390 VLQLGRTRSC*GDPRMPVRR*GTSARLLVCRTATPSPMCAPRVGSLRRLVVGG 548
Score = 41.8 bits (85), Expect(3) = 1e-025
Identities = 16/25 (64%), Positives = 17/25 (68%)
Frame = -2 / -3
Query: 591 QTSYPSSEHKAWCGCEALLVQARSA 517
QTSYP S H+AWCGC A RSA
Sbjct: 527 QTSYPWSAHRAWCGCAAHQEPCRSA 453
Score = 35.4 bits (71), Expect(4) = 3e-029
Identities = 15/36 (41%), Positives = 19/36 (52%)
Frame = +2 / +1
Query: 188 DKEQLQRRDPQAPLHEXXXXXXXXXXXXRQVHGGEG 295
D+EQ+QRR PQ LHE Q+H G+G
Sbjct: 121 DQEQVQRRHPQEALHEQDQPPAALHAPSLQLHEGKG 228
Score = 29.9 bits (59), Expect(3) = 5e-057
Identities = 11/18 (61%), Positives = 12/18 (66%)
Frame = -2 / -3
Query: 132 TWAPCAWSSCCGRRLRDR 79
TWA AWSSC R+ R R
Sbjct: 65 TWARRAWSSCSSRQRRGR 12
Score = 26.7 bits (52), Expect(3) = 1e-025
Identities = 17/37 (45%), Positives = 18/37 (48%)
Frame = -2 / -3
Query: 489 PSAEPCFAQVGHXXXXXXXXGTLRQH**SWPSLSQ*T 379
PS C Q+ H GT QH* S PSLS *T
Sbjct: 425 PSTGSCSPQLEHGEQAGQK*GTPHQH*QSLPSLSL*T 315
Score = 24.9 bits (48), Expect(4) = 3e-029
Identities = 10/13 (76%), Positives = 11/13 (84%)
Frame = +2 / +1
Query: 101 QQEDQAHGAQVRR 139
+QEDQA AQVRR
Sbjct: 34 EQEDQARRAQVRR 72
>gb|BU989855.1|BU989855 HF22O04r HF Hordeum vulgare subsp. vulgare cDNA clone HF22O04
5-PRIME, mRNA sequence
Length = 623
Score = 222 bits (480), Expect(2) = e-100
Identities = 90/101 (89%), Positives = 96/101 (95%)
Frame = +3 / +3
Query: 303 IAVIVGTVTDDKRISEVPAMKVCALRFTETARARIINAGGECLTFDQLALRAPLGQNTVL 482
IAV+VGT+TDD RI E+PAMKV ALRFTETARARI+NAGGECLTFDQLALRAP G+NT+L
Sbjct: 321 IAVVVGTITDDMRIQEIPAMKVTALRFTETARARIVNAGGECLTFDQLALRAPTGENTIL 500
Query: 483 LRGPKNAREAVRHFGPAPGVPHSHTKPYVRSKGRKFEKARG 605
LRGPKNAREAVRHFG APGVPHSHTKPYVRSKGRKFEKARG
Sbjct: 501 LRGPKNAREAVRHFGKAPGVPHSHTKPYVRSKGRKFEKARG 623
Score = 162 bits (349), Expect(2) = e-100
Identities = 70/83 (84%), Positives = 75/83 (90%)
Frame = +3 / +3
Query: 69 AMGIDLVAGGRNKKTKRTAPKSDDVYLKLLVKLYRFLVRRTKSNFNAVILKRLFMSKTNR 248
AMGIDLVAGGRNK+TKR APKSDDVYLKLLVKLYRFLVRRTKS FNAVILKRLFMSKTNR
Sbjct: 84 AMGIDLVAGGRNKRTKRVAPKSDDVYLKLLVKLYRFLVRRTKSKFNAVILKRLFMSKTNR 263
Query: 249 PPLSMRRLVRFMEGKGDQIAVIV 317
PPLSMRRL FM+GK ++ +V
Sbjct: 264 PPLSMRRLSNFMKGKEEKNIAVV 332
Score = 160 bits (344), Expect(3) = 2e-060
Identities = 73/91 (80%), Positives = 76/91 (83%)
Frame = -1 / -2
Query: 574 ERT*GLVWL*GTPGAGPKCLTASLAFLGPLSRTVFCPSGARSASWSKVRHSPPALMILAL 395
ERT*GLVWL GTPGA PKCLTAS AFLGPL+R VF P GAR ASWSKVRHSPPAL ILAL
Sbjct: 592 ERT*GLVWLCGTPGALPKCLTASRAFLGPLNRIVFSPVGARRASWSKVRHSPPALTILAL 413
Query: 394 AVSVNLSAQTFIAGTSLILLSSVTVPTITAI 302
AVSVNL A TFIAG S I +SSV VPT TA+
Sbjct: 412 AVSVNLRAVTFIAGISWIRMSSVIVPTTTAM 320
Score = 125 bits (268), Expect = 3e-028
Identities = 55/105 (52%), Positives = 72/105 (68%)
Frame = -3 / -1
Query: 605 SSRLLKLPTLRANIRLGVAVRHSWCRPEVPDSFPSVLRTPQQNRVLPKWGTERELVEGEA 426
++ LLKLPTL A+I LGVAVRH+ EVP +L +PQQ+RVLP W TE +LV+ EA
Sbjct: 623 TTSLLKLPTLGAHIGLGVAVRHTRSLAEVPHRLTGILGSPQQDRVLPSWSTESKLVKSEA 444
Query: 425 LSASIDDPGPRCLSEPERADLHRRHLADPLVVGHGAHNHGDLITL 291
L SID+P PRCL EP+ +LH L DP V+ A+NH +++ L
Sbjct: 443 LPTSIDNPCPRCLCEPQSGNLHCWDLLDPHVICDCANNHSNVLLL 309
Score = 92.7 bits (196), Expect(3) = 1e-027
Identities = 48/89 (53%), Positives = 51/89 (57%)
Frame = -1 / -2
Query: 334 SSVTVPTITAI*SPFPSMNLTRRRIESGGRLVLLMKRRLRITALKLLFVXXXXXXXXXXX 155
S + T S FP M L RRR+ESGGRLVLLMK LR+TAL LL V
Sbjct: 349 SVIVPTTTAMFFSSFPFMKLERRRMESGGRLVLLMKSLLRMTALNLLLVLLTRKR*SLTR 170
Query: 154 XXXXXXSDLGAVRLVFLLRPPATRSIPMA 68
SDLGA RLV L PPATRSIPMA
Sbjct: 169 SLRYTSSDLGATRLVLLFLPPATRSIPMA 83
Score = 73.0 bits (153), Expect(4) = 4e-030
Identities = 27/54 (50%), Positives = 33/54 (61%)
Frame = +2 / +2
Query: 314 CGHRDRRQEDQRGAGDEGLRAQVH*DSEGQDHQCWRRVPHLRPARAPCPTWAKH 475
C H R D R +EG R++VH DSEG+D QCW VPH PA +PC W +H
Sbjct: 332 CWHNHR*HADPRDPSNEGYRSEVHRDSEGKDCQCWWGVPHF*PACSPCSNWGEH 493
Score = 69.8 bits (146), Expect(3) = 2e-060
Identities = 30/43 (69%), Positives = 33/43 (76%)
Frame = -3 / -1
Query: 302 LITLPLHEPDEAAHRERRAVGLAHEEALEDHGVEVALCPAHKE 174
L+ L LHE E AH ERRAVGLAHEE LED GVE+AL P H+E
Sbjct: 317 LLLLSLHEVGETAHGERRAVGLAHEEPLEDDGVELALGPPHQE 189
Score = 47.8 bits (98), Expect(4) = 4e-030
Identities = 27/48 (56%), Positives = 29/48 (60%)
Frame = +1 / +1
Query: 454 VPHLGKTRFC*GVLRTLGKLSGTSGLHQECLTATPSLMFARRVGSLRR 597
V LG+TR C*G R + GTS C TATPS M A RVGSLRR
Sbjct: 472 VLQLGRTRSC*GDPRMPVRR*GTSARLLVCRTATPSPMCAPRVGSLRR 615
Score = 41.8 bits (85), Expect(3) = 1e-027
Identities = 16/25 (64%), Positives = 17/25 (68%)
Frame = -2 / -3
Query: 591 QTSYPSSEHKAWCGCEALLVQARSA 517
QTSYP S H+AWCGC A RSA
Sbjct: 609 QTSYPWSAHRAWCGCAAHQEPCRSA 535
Score = 41.4 bits (84), Expect(3) = 2e-060
Identities = 14/21 (66%), Positives = 15/21 (71%)
Frame = -2 / -3
Query: 132 TWAPCAWSSCCGRRLRDRYPW 70
TWA AWSSC R+ R RYPW
Sbjct: 147 TWARRAWSSCSSRQRRGRYPW 85
Score = 35.4 bits (71), Expect(4) = 4e-030
Identities = 15/36 (41%), Positives = 19/36 (52%)
Frame = +2 / +2
Query: 188 DKEQLQRRDPQAPLHEXXXXXXXXXXXXRQVHGGEG 295
D+EQ+QRR PQ LHE Q+H G+G
Sbjct: 203 DQEQVQRRHPQEALHEQDQPPAALHAPSLQLHEGKG 310
Score = 30.4 bits (60), Expect(4) = 4e-030
Identities = 13/23 (56%), Positives = 14/23 (60%)
Frame = +2 / +2
Query: 71 HGYXXXXXXPQQEDQAHGAQVRR 139
HGY +QEDQA AQVRR
Sbjct: 86 HGYRPRRWREEQEDQARRAQVRR 154
Score = 26.7 bits (52), Expect(3) = 1e-027
Identities = 17/37 (45%), Positives = 18/37 (48%)
Frame = -2 / -3
Query: 489 PSAEPCFAQVGHXXXXXXXXGTLRQH**SWPSLSQ*T 379
PS C Q+ H GT QH* S PSLS *T
Sbjct: 507 PSTGSCSPQLEHGEQAGQK*GTPHQH*QSLPSLSL*T 397
>gb|CA019512.1|CA019512 HV12D11r HV Hordeum vulgare subsp. vulgare cDNA clone HV12D11
5-PRIME, mRNA sequence
Length = 610
Score = 222 bits (480), Expect(2) = e-100
Identities = 90/101 (89%), Positives = 96/101 (95%)
Frame = +3 / +2
Query: 303 IAVIVGTVTDDKRISEVPAMKVCALRFTETARARIINAGGECLTFDQLALRAPLGQNTVL 482
IAV+VGT+TDD RI E+PAMKV ALRFTETARARI+NAGGECLTFDQLALRAP G+NT+L
Sbjct: 308 IAVVVGTITDDMRIQEIPAMKVTALRFTETARARIVNAGGECLTFDQLALRAPTGENTIL 487
Query: 483 LRGPKNAREAVRHFGPAPGVPHSHTKPYVRSKGRKFEKARG 605
LRGPKNAREAVRHFG APGVPHSHTKPYVRSKGRKFEKARG
Sbjct: 488 LRGPKNAREAVRHFGKAPGVPHSHTKPYVRSKGRKFEKARG 610
Score = 162 bits (349), Expect(2) = e-100
Identities = 70/83 (84%), Positives = 75/83 (90%)
Frame = +3 / +2
Query: 69 AMGIDLVAGGRNKKTKRTAPKSDDVYLKLLVKLYRFLVRRTKSNFNAVILKRLFMSKTNR 248
AMGIDLVAGGRNK+TKR APKSDDVYLKLLVKLYRFLVRRTKS FNAVILKRLFMSKTNR
Sbjct: 71 AMGIDLVAGGRNKRTKRVAPKSDDVYLKLLVKLYRFLVRRTKSKFNAVILKRLFMSKTNR 250
Query: 249 PPLSMRRLVRFMEGKGDQIAVIV 317
PPLSMRRL FM+GK ++ +V
Sbjct: 251 PPLSMRRLSNFMKGKEEKNIAVV 319
Score = 160 bits (344), Expect(3) = 2e-060
Identities = 73/91 (80%), Positives = 76/91 (83%)
Frame = -1 / -2
Query: 574 ERT*GLVWL*GTPGAGPKCLTASLAFLGPLSRTVFCPSGARSASWSKVRHSPPALMILAL 395
ERT*GLVWL GTPGA PKCLTAS AFLGPL+R VF P GAR ASWSKVRHSPPAL ILAL
Sbjct: 579 ERT*GLVWLCGTPGALPKCLTASRAFLGPLNRIVFSPVGARRASWSKVRHSPPALTILAL 400
Query: 394 AVSVNLSAQTFIAGTSLILLSSVTVPTITAI 302
AVSVNL A TFIAG S I +SSV VPT TA+
Sbjct: 399 AVSVNLRAVTFIAGISWIRMSSVIVPTTTAM 307
Score = 125 bits (268), Expect = 3e-028
Identities = 55/105 (52%), Positives = 72/105 (68%)
Frame = -3 / -1
Query: 605 SSRLLKLPTLRANIRLGVAVRHSWCRPEVPDSFPSVLRTPQQNRVLPKWGTERELVEGEA 426
++ LLKLPTL A+I LGVAVRH+ EVP +L +PQQ+RVLP W TE +LV+ EA
Sbjct: 610 TTSLLKLPTLGAHIGLGVAVRHTRSLAEVPHRLTGILGSPQQDRVLPSWSTESKLVKSEA 431
Query: 425 LSASIDDPGPRCLSEPERADLHRRHLADPLVVGHGAHNHGDLITL 291
L SID+P PRCL EP+ +LH L DP V+ A+NH +++ L
Sbjct: 430 LPTSIDNPCPRCLCEPQSGNLHCWDLLDPHVICDCANNHSNVLLL 296
Score = 92.7 bits (196), Expect(3) = 1e-027
Identities = 48/89 (53%), Positives = 51/89 (57%)
Frame = -1 / -2
Query: 334 SSVTVPTITAI*SPFPSMNLTRRRIESGGRLVLLMKRRLRITALKLLFVXXXXXXXXXXX 155
S + T S FP M L RRR+ESGGRLVLLMK LR+TAL LL V
Sbjct: 336 SVIVPTTTAMFFSSFPFMKLERRRMESGGRLVLLMKSLLRMTALNLLLVLLTRKR*SLTR 157
Query: 154 XXXXXXSDLGAVRLVFLLRPPATRSIPMA 68
SDLGA RLV L PPATRSIPMA
Sbjct: 156 SLRYTSSDLGATRLVLLFLPPATRSIPMA 70
Score = 73.0 bits (153), Expect(4) = 4e-030
Identities = 27/54 (50%), Positives = 33/54 (61%)
Frame = +2 / +1
Query: 314 CGHRDRRQEDQRGAGDEGLRAQVH*DSEGQDHQCWRRVPHLRPARAPCPTWAKH 475
C H R D R +EG R++VH DSEG+D QCW VPH PA +PC W +H
Sbjct: 319 CWHNHR*HADPRDPSNEGYRSEVHRDSEGKDCQCWWGVPHF*PACSPCSNWGEH 480
Score = 69.8 bits (146), Expect(3) = 2e-060
Identities = 30/43 (69%), Positives = 33/43 (76%)
Frame = -3 / -1
Query: 302 LITLPLHEPDEAAHRERRAVGLAHEEALEDHGVEVALCPAHKE 174
L+ L LHE E AH ERRAVGLAHEE LED GVE+AL P H+E
Sbjct: 304 LLLLSLHEVGETAHGERRAVGLAHEEPLEDDGVELALGPPHQE 176
Score = 47.8 bits (98), Expect(4) = 4e-030
Identities = 27/48 (56%), Positives = 29/48 (60%)
Frame = +1 / +3
Query: 454 VPHLGKTRFC*GVLRTLGKLSGTSGLHQECLTATPSLMFARRVGSLRR 597
V LG+TR C*G R + GTS C TATPS M A RVGSLRR
Sbjct: 459 VLQLGRTRSC*GDPRMPVRR*GTSARLLVCRTATPSPMCAPRVGSLRR 602
Score = 41.8 bits (85), Expect(3) = 1e-027
Identities = 16/25 (64%), Positives = 17/25 (68%)
Frame = -2 / -3
Query: 591 QTSYPSSEHKAWCGCEALLVQARSA 517
QTSYP S H+AWCGC A RSA
Sbjct: 596 QTSYPWSAHRAWCGCAAHQEPCRSA 522
Score = 41.4 bits (84), Expect(3) = 2e-060
Identities = 14/21 (66%), Positives = 15/21 (71%)
Frame = -2 / -3
Query: 132 TWAPCAWSSCCGRRLRDRYPW 70
TWA AWSSC R+ R RYPW
Sbjct: 134 TWARRAWSSCSSRQRRGRYPW 72
Score = 35.4 bits (71), Expect(4) = 4e-030
Identities = 15/36 (41%), Positives = 19/36 (52%)
Frame = +2 / +1
Query: 188 DKEQLQRRDPQAPLHEXXXXXXXXXXXXRQVHGGEG 295
D+EQ+QRR PQ LHE Q+H G+G
Sbjct: 190 DQEQVQRRHPQEALHEQDQPPAALHAPSLQLHEGKG 297
Score = 30.4 bits (60), Expect(4) = 4e-030
Identities = 13/23 (56%), Positives = 14/23 (60%)
Frame = +2 / +1
Query: 71 HGYXXXXXXPQQEDQAHGAQVRR 139
HGY +QEDQA AQVRR
Sbjct: 73 HGYRPRRWREEQEDQARRAQVRR 141
Score = 26.7 bits (52), Expect(3) = 1e-027
Identities = 17/37 (45%), Positives = 18/37 (48%)
Frame = -2 / -3
Query: 489 PSAEPCFAQVGHXXXXXXXXGTLRQH**SWPSLSQ*T 379
PS C Q+ H GT QH* S PSLS *T
Sbjct: 494 PSTGSCSPQLEHGEQAGQK*GTPHQH*QSLPSLSL*T 384
>gb|BJ471147.1|BJ471147 BJ471147 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal17a03 5', mRNA sequence
Length = 608
Score = 222 bits (480), Expect(2) = e-100
Identities = 90/101 (89%), Positives = 96/101 (95%)
Frame = +3 / +2
Query: 303 IAVIVGTVTDDKRISEVPAMKVCALRFTETARARIINAGGECLTFDQLALRAPLGQNTVL 482
IAV+VGT+TDD RI E+PAMKV ALRFTETARARI+NAGGECLTFDQLALRAP G+NT+L
Sbjct: 305 IAVVVGTITDDMRIQEIPAMKVTALRFTETARARIVNAGGECLTFDQLALRAPTGENTIL 484
Query: 483 LRGPKNAREAVRHFGPAPGVPHSHTKPYVRSKGRKFEKARG 605
LRGPKNAREAVRHFG APGVPHSHTKPYVRSKGRKFEKARG
Sbjct: 485 LRGPKNAREAVRHFGKAPGVPHSHTKPYVRSKGRKFEKARG 607
Score = 162 bits (349), Expect(2) = e-100
Identities = 70/83 (84%), Positives = 75/83 (90%)
Frame = +3 / +2
Query: 69 AMGIDLVAGGRNKKTKRTAPKSDDVYLKLLVKLYRFLVRRTKSNFNAVILKRLFMSKTNR 248
AMGIDLVAGGRNK+TKR APKSDDVYLKLLVKLYRFLVRRTKS FNAVILKRLFMSKTNR
Sbjct: 68 AMGIDLVAGGRNKRTKRVAPKSDDVYLKLLVKLYRFLVRRTKSKFNAVILKRLFMSKTNR 247
Query: 249 PPLSMRRLVRFMEGKGDQIAVIV 317
PPLSMRRL FM+GK ++ +V
Sbjct: 248 PPLSMRRLSNFMKGKEEKNIAVV 316
Score = 160 bits (344), Expect(3) = 2e-060
Identities = 73/91 (80%), Positives = 76/91 (83%)
Frame = -1 / -3
Query: 574 ERT*GLVWL*GTPGAGPKCLTASLAFLGPLSRTVFCPSGARSASWSKVRHSPPALMILAL 395
ERT*GLVWL GTPGA PKCLTAS AFLGPL+R VF P GAR ASWSKVRHSPPAL ILAL
Sbjct: 576 ERT*GLVWLCGTPGALPKCLTASRAFLGPLNRIVFSPVGARRASWSKVRHSPPALTILAL 397
Query: 394 AVSVNLSAQTFIAGTSLILLSSVTVPTITAI 302
AVSVNL A TFIAG S I +SSV VPT TA+
Sbjct: 396 AVSVNLRAVTFIAGISWIRMSSVIVPTTTAM 304
Score = 125 bits (268), Expect = 3e-028
Identities = 55/105 (52%), Positives = 72/105 (68%)
Frame = -3 / -2
Query: 605 SSRLLKLPTLRANIRLGVAVRHSWCRPEVPDSFPSVLRTPQQNRVLPKWGTERELVEGEA 426
++ LLKLPTL A+I LGVAVRH+ EVP +L +PQQ+RVLP W TE +LV+ EA
Sbjct: 607 TTSLLKLPTLGAHIGLGVAVRHTRSLAEVPHRLTGILGSPQQDRVLPSWSTESKLVKSEA 428
Query: 425 LSASIDDPGPRCLSEPERADLHRRHLADPLVVGHGAHNHGDLITL 291
L SID+P PRCL EP+ +LH L DP V+ A+NH +++ L
Sbjct: 427 LPTSIDNPCPRCLCEPQSGNLHCWDLLDPHVICDCANNHSNVLLL 293
Score = 92.7 bits (196), Expect(3) = 1e-027
Identities = 48/89 (53%), Positives = 51/89 (57%)
Frame = -1 / -3
Query: 334 SSVTVPTITAI*SPFPSMNLTRRRIESGGRLVLLMKRRLRITALKLLFVXXXXXXXXXXX 155
S + T S FP M L RRR+ESGGRLVLLMK LR+TAL LL V
Sbjct: 333 SVIVPTTTAMFFSSFPFMKLERRRMESGGRLVLLMKSLLRMTALNLLLVLLTRKR*SLTR 154
Query: 154 XXXXXXSDLGAVRLVFLLRPPATRSIPMA 68
SDLGA RLV L PPATRSIPMA
Sbjct: 153 SLRYTSSDLGATRLVLLFLPPATRSIPMA 67
Score = 73.0 bits (153), Expect(4) = 4e-030
Identities = 27/54 (50%), Positives = 33/54 (61%)
Frame = +2 / +1
Query: 314 CGHRDRRQEDQRGAGDEGLRAQVH*DSEGQDHQCWRRVPHLRPARAPCPTWAKH 475
C H R D R +EG R++VH DSEG+D QCW VPH PA +PC W +H
Sbjct: 316 CWHNHR*HADPRDPSNEGYRSEVHRDSEGKDCQCWWGVPHF*PACSPCSNWGEH 477
Score = 69.8 bits (146), Expect(3) = 2e-060
Identities = 30/43 (69%), Positives = 33/43 (76%)
Frame = -3 / -2
Query: 302 LITLPLHEPDEAAHRERRAVGLAHEEALEDHGVEVALCPAHKE 174
L+ L LHE E AH ERRAVGLAHEE LED GVE+AL P H+E
Sbjct: 301 LLLLSLHEVGETAHGERRAVGLAHEEPLEDDGVELALGPPHQE 173
Score = 47.8 bits (98), Expect(4) = 4e-030
Identities = 27/48 (56%), Positives = 29/48 (60%)
Frame = +1 / +3
Query: 454 VPHLGKTRFC*GVLRTLGKLSGTSGLHQECLTATPSLMFARRVGSLRR 597
V LG+TR C*G R + GTS C TATPS M A RVGSLRR
Sbjct: 456 VLQLGRTRSC*GDPRMPVRR*GTSARLLVCRTATPSPMCAPRVGSLRR 599
Score = 41.8 bits (85), Expect(3) = 1e-027
Identities = 16/25 (64%), Positives = 17/25 (68%)
Frame = -2 / -1
Query: 591 QTSYPSSEHKAWCGCEALLVQARSA 517
QTSYP S H+AWCGC A RSA
Sbjct: 593 QTSYPWSAHRAWCGCAAHQEPCRSA 519
Score = 41.4 bits (84), Expect(3) = 2e-060
Identities = 14/21 (66%), Positives = 15/21 (71%)
Frame = -2 / -1
Query: 132 TWAPCAWSSCCGRRLRDRYPW 70
TWA AWSSC R+ R RYPW
Sbjct: 131 TWARRAWSSCSSRQRRGRYPW 69
Score = 35.4 bits (71), Expect(4) = 4e-030
Identities = 15/36 (41%), Positives = 19/36 (52%)
Frame = +2 / +1
Query: 188 DKEQLQRRDPQAPLHEXXXXXXXXXXXXRQVHGGEG 295
D+EQ+QRR PQ LHE Q+H G+G
Sbjct: 187 DQEQVQRRHPQEALHEQDQPPAALHAPSLQLHEGKG 294
Score = 30.4 bits (60), Expect(4) = 4e-030
Identities = 13/23 (56%), Positives = 14/23 (60%)
Frame = +2 / +1
Query: 71 HGYXXXXXXPQQEDQAHGAQVRR 139
HGY +QEDQA AQVRR
Sbjct: 70 HGYRPRRWREEQEDQARRAQVRR 138
Score = 26.7 bits (52), Expect(3) = 1e-027
Identities = 17/37 (45%), Positives = 18/37 (48%)
Frame = -2 / -1
Query: 489 PSAEPCFAQVGHXXXXXXXXGTLRQH**SWPSLSQ*T 379
PS C Q+ H GT QH* S PSLS *T
Sbjct: 491 PSTGSCSPQLEHGEQAGQK*GTPHQH*QSLPSLSL*T 381
>gb|BM370156.2|BM370156 EBro08_SQ003_C16_R root, 3 week, drought-stressed, cv Optic, EBro08
Hordeum vulgare subsp. vulgare cDNA clone
EBro08_SQ003_C16 5', mRNA sequence
Length = 607
Score = 222 bits (480), Expect(2) = e-100
Identities = 90/101 (89%), Positives = 96/101 (95%)
Frame = +3 / +2
Query: 303 IAVIVGTVTDDKRISEVPAMKVCALRFTETARARIINAGGECLTFDQLALRAPLGQNTVL 482
IAV+VGT+TDD RI E+PAMKV ALRFTETARARI+NAGGECLTFDQLALRAP G+NT+L
Sbjct: 305 IAVVVGTITDDMRIQEIPAMKVTALRFTETARARIVNAGGECLTFDQLALRAPTGENTIL 484
Query: 483 LRGPKNAREAVRHFGPAPGVPHSHTKPYVRSKGRKFEKARG 605
LRGPKNAREAVRHFG APGVPHSHTKPYVRSKGRKFEKARG
Sbjct: 485 LRGPKNAREAVRHFGKAPGVPHSHTKPYVRSKGRKFEKARG 607
Score = 162 bits (349), Expect(2) = e-100
Identities = 70/83 (84%), Positives = 75/83 (90%)
Frame = +3 / +2
Query: 69 AMGIDLVAGGRNKKTKRTAPKSDDVYLKLLVKLYRFLVRRTKSNFNAVILKRLFMSKTNR 248
AMGIDLVAGGRNK+TKR APKSDDVYLKLLVKLYRFLVRRTKS FNAVILKRLFMSKTNR
Sbjct: 68 AMGIDLVAGGRNKRTKRVAPKSDDVYLKLLVKLYRFLVRRTKSKFNAVILKRLFMSKTNR 247
Query: 249 PPLSMRRLVRFMEGKGDQIAVIV 317
PPLSMRRL FM+GK ++ +V
Sbjct: 248 PPLSMRRLSNFMKGKEEKNIAVV 316
Score = 160 bits (344), Expect(3) = 2e-060
Identities = 73/91 (80%), Positives = 76/91 (83%)
Frame = -1 / -2
Query: 574 ERT*GLVWL*GTPGAGPKCLTASLAFLGPLSRTVFCPSGARSASWSKVRHSPPALMILAL 395
ERT*GLVWL GTPGA PKCLTAS AFLGPL+R VF P GAR ASWSKVRHSPPAL ILAL
Sbjct: 576 ERT*GLVWLCGTPGALPKCLTASRAFLGPLNRIVFSPVGARRASWSKVRHSPPALTILAL 397
Query: 394 AVSVNLSAQTFIAGTSLILLSSVTVPTITAI 302
AVSVNL A TFIAG S I +SSV VPT TA+
Sbjct: 396 AVSVNLRAVTFIAGISWIRMSSVIVPTTTAM 304
Score = 125 bits (268), Expect = 3e-028
Identities = 55/105 (52%), Positives = 72/105 (68%)
Frame = -3 / -1
Query: 605 SSRLLKLPTLRANIRLGVAVRHSWCRPEVPDSFPSVLRTPQQNRVLPKWGTERELVEGEA 426
++ LLKLPTL A+I LGVAVRH+ EVP +L +PQQ+RVLP W TE +LV+ EA
Sbjct: 607 TTSLLKLPTLGAHIGLGVAVRHTRSLAEVPHRLTGILGSPQQDRVLPSWSTESKLVKSEA 428
Query: 425 LSASIDDPGPRCLSEPERADLHRRHLADPLVVGHGAHNHGDLITL 291
L SID+P PRCL EP+ +LH L DP V+ A+NH +++ L
Sbjct: 427 LPTSIDNPCPRCLCEPQSGNLHCWDLLDPHVICDCANNHSNVLLL 293
Score = 92.7 bits (196), Expect(3) = 1e-027
Identities = 48/89 (53%), Positives = 51/89 (57%)
Frame = -1 / -2
Query: 334 SSVTVPTITAI*SPFPSMNLTRRRIESGGRLVLLMKRRLRITALKLLFVXXXXXXXXXXX 155
S + T S FP M L RRR+ESGGRLVLLMK LR+TAL LL V
Sbjct: 333 SVIVPTTTAMFFSSFPFMKLERRRMESGGRLVLLMKSLLRMTALNLLLVLLTRKR*SLTR 154
Query: 154 XXXXXXSDLGAVRLVFLLRPPATRSIPMA 68
SDLGA RLV L PPATRSIPMA
Sbjct: 153 SLRYTSSDLGATRLVLLFLPPATRSIPMA 67
Score = 73.0 bits (153), Expect(4) = 4e-030
Identities = 27/54 (50%), Positives = 33/54 (61%)
Frame = +2 / +1
Query: 314 CGHRDRRQEDQRGAGDEGLRAQVH*DSEGQDHQCWRRVPHLRPARAPCPTWAKH 475
C H R D R +EG R++VH DSEG+D QCW VPH PA +PC W +H
Sbjct: 316 CWHNHR*HADPRDPSNEGYRSEVHRDSEGKDCQCWWGVPHF*PACSPCSNWGEH 477
Score = 69.8 bits (146), Expect(3) = 2e-060
Identities = 30/43 (69%), Positives = 33/43 (76%)
Frame = -3 / -1
Query: 302 LITLPLHEPDEAAHRERRAVGLAHEEALEDHGVEVALCPAHKE 174
L+ L LHE E AH ERRAVGLAHEE LED GVE+AL P H+E
Sbjct: 301 LLLLSLHEVGETAHGERRAVGLAHEEPLEDDGVELALGPPHQE 173
Score = 47.8 bits (98), Expect(4) = 4e-030
Identities = 27/48 (56%), Positives = 29/48 (60%)
Frame = +1 / +3
Query: 454 VPHLGKTRFC*GVLRTLGKLSGTSGLHQECLTATPSLMFARRVGSLRR 597
V LG+TR C*G R + GTS C TATPS M A RVGSLRR
Sbjct: 456 VLQLGRTRSC*GDPRMPVRR*GTSARLLVCRTATPSPMCAPRVGSLRR 599
Score = 41.8 bits (85), Expect(3) = 1e-027
Identities = 16/25 (64%), Positives = 17/25 (68%)
Frame = -2 / -3
Query: 591 QTSYPSSEHKAWCGCEALLVQARSA 517
QTSYP S H+AWCGC A RSA
Sbjct: 593 QTSYPWSAHRAWCGCAAHQEPCRSA 519
Score = 41.4 bits (84), Expect(3) = 2e-060
Identities = 14/21 (66%), Positives = 15/21 (71%)
Frame = -2 / -3
Query: 132 TWAPCAWSSCCGRRLRDRYPW 70
TWA AWSSC R+ R RYPW
Sbjct: 131 TWARRAWSSCSSRQRRGRYPW 69
Score = 35.4 bits (71), Expect(4) = 4e-030
Identities = 15/36 (41%), Positives = 19/36 (52%)
Frame = +2 / +1
Query: 188 DKEQLQRRDPQAPLHEXXXXXXXXXXXXRQVHGGEG 295
D+EQ+QRR PQ LHE Q+H G+G
Sbjct: 187 DQEQVQRRHPQEALHEQDQPPAALHAPSLQLHEGKG 294
Score = 30.4 bits (60), Expect(4) = 4e-030
Identities = 13/23 (56%), Positives = 14/23 (60%)
Frame = +2 / +1
Query: 71 HGYXXXXXXPQQEDQAHGAQVRR 139
HGY +QEDQA AQVRR
Sbjct: 70 HGYRPRRWREEQEDQARRAQVRR 138
Score = 26.7 bits (52), Expect(3) = 1e-027
Identities = 17/37 (45%), Positives = 18/37 (48%)
Frame = -2 / -3
Query: 489 PSAEPCFAQVGHXXXXXXXXGTLRQH**SWPSLSQ*T 379
PS C Q+ H GT QH* S PSLS *T
Sbjct: 491 PSTGSCSPQLEHGEQAGQK*GTPHQH*QSLPSLSL*T 381
>gb|CK125351.1|CK125351 BES1824107m06 BES1824 Hordeum vulgare subsp. vulgare cDNA clone
MPMGp2010M067 5-PRIME, mRNA sequence
Length = 736
Score = 246 bits (531), Expect(3) = e-100
Identities = 101/113 (89%), Positives = 107/113 (94%)
Frame = +3 / +3
Query: 303 IAVIVGTVTDDKRISEVPAMKVCALRFTETARARIINAGGECLTFDQLALRAPLGQNTVL 482
IAV+VGT+TDD RI E+PAMKV LRFTETARARI+NAGGECLTFDQLALRAP G+NT+L
Sbjct: 309 IAVVVGTITDDMRIQEIPAMKVTXLRFTETARARIVNAGGECLTFDQLALRAPTGENTIL 488
Query: 483 LRGPKNAREAVRHFGPAPGVPHSHTKPYVRSKGRKFEKARGRRNSRGFKV*VA 641
LRGPKNAREAVRHFG APGVPHSHTKPYVRSKGRKFEKARGRRNSRGFKV*VA
Sbjct: 489 LRGPKNAREAVRHFGKAPGVPHSHTKPYVRSKGRKFEKARGRRNSRGFKV*VA 647
Score = 158 bits (340), Expect(4) = 2e-055
Identities = 72/91 (79%), Positives = 75/91 (82%)
Frame = -1 / -1
Query: 574 ERT*GLVWL*GTPGAGPKCLTASLAFLGPLSRTVFCPSGARSASWSKVRHSPPALMILAL 395
ERT*GLVWL GTPGA PKCLTAS AFLGPL+R VF P GAR ASWSKVRHSPPAL ILAL
Sbjct: 580 ERT*GLVWLCGTPGALPKCLTASRAFLGPLNRIVFSPVGARRASWSKVRHSPPALTILAL 401
Query: 394 AVSVNLSAQTFIAGTSLILLSSVTVPTITAI 302
AVSVNL TFIAG S I +SSV VPT TA+
Sbjct: 400 AVSVNLRXVTFIAGISWIRMSSVIVPTTTAM 308
Score = 146 bits (314), Expect(2) = 1e-034
Identities = 64/117 (54%), Positives = 83/117 (70%)
Frame = -3 / -3
Query: 641 GHLDLEAPAVPPSSRLLKLPTLRANIRLGVAVRHSWCRPEVPDSFPSVLRTPQQNRVLPK 462
G+L+LEA AVPP++ LLKLPTL A+I LGVAVRH+ EVP +L +PQQ+RVLP
Sbjct: 647 GNLNLEATAVPPTTSLLKLPTLGAHIGLGVAVRHTRSLAEVPHRLTGILGSPQQDRVLPS 468
Query: 461 WGTERELVEGEALSASIDDPGPRCLSEPERADLHRRHLADPLVVGHGAHNHGDLITL 291
W TE +LV+ EAL SID+P PRCL EP+ +LH L DP V+ A+NH +++ L
Sbjct: 467 WSTESKLVKSEALPTSIDNPCPRCLCEPQXGNLHCWDLLDPHVICDCANNHSNVLLL 297
Score = 135 bits (290), Expect(3) = e-100
Identities = 58/72 (80%), Positives = 63/72 (87%)
Frame = +3 / +3
Query: 102 NKKTKRTAPKSDDVYLKLLVKLYRFLVRRTKSNFNAVILKRLFMSKTNRPPLSMRRLVRF 281
NK+TKR APKSDDVYLKLLVKLYRFL RRTKS FNAVILKRLFMSKTNRPPLSMRRL F
Sbjct: 105 NKRTKRVAPKSDDVYLKLLVKLYRFLXRRTKSKFNAVILKRLFMSKTNRPPLSMRRLSNF 284
Query: 282 MEGKGDQIAVIV 317
M+GK ++ +V
Sbjct: 285 MKGKEEKNIAVV 320
Score = 73.0 bits (153), Expect(4) = 1e-032
Identities = 27/54 (50%), Positives = 33/54 (61%)
Frame = +2 / +2
Query: 314 CGHRDRRQEDQRGAGDEGLRAQVH*DSEGQDHQCWRRVPHLRPARAPCPTWAKH 475
C H R D R +EG R++VH DSEG+D QCW VPH PA +PC W +H
Sbjct: 320 CWHNHR*HADPRDPSNEGYRSEVHRDSEGKDCQCWWGVPHF*PACSPCSNWGEH 481
Score = 65.7 bits (137), Expect(4) = 2e-055
Identities = 29/43 (67%), Positives = 32/43 (74%)
Frame = -3 / -3
Query: 302 LITLPLHEPDEAAHRERRAVGLAHEEALEDHGVEVALCPAHKE 174
L+ L LHE E AH ERRAVGLAHEE LED GVE+AL P +E
Sbjct: 305 LLLLSLHEVGETAHGERRAVGLAHEEPLEDDGVELALGPPXQE 177
Score = 62.9 bits (131), Expect(4) = 1e-032
Identities = 36/63 (57%), Positives = 38/63 (60%)
Frame = +1 / +1
Query: 454 VPHLGKTRFC*GVLRTLGKLSGTSGLHQECLTATPSLMFARRVGSLRRREEGGTAGASRS 633
V LG+TR C*G R + GTS C TATPS M A RVGSLRR GGTA ASR
Sbjct: 460 VLQLGRTRSC*GDPRMPVRR*GTSARLLVCRTATPSPMCAPRVGSLRRLVVGGTAVASRF 639
Query: 634 KWP 642
K P
Sbjct: 640 KLP 648
Score = 35.4 bits (71), Expect(4) = 1e-032
Identities = 15/36 (41%), Positives = 19/36 (52%)
Frame = +2 / +2
Query: 188 DKEQLQRRDPQAPLHEXXXXXXXXXXXXRQVHGGEG 295
D+EQ+QRR PQ LHE Q+H G+G
Sbjct: 191 DQEQVQRRHPQEALHEQDQPPAALHAPSLQLHEGKG 298
Score = 24.4 bits (47), Expect(4) = 2e-055
Identities = 8/10 (80%), Positives = 8/10 (80%)
Frame = -2 / -2
Query: 132 TWAPCAWSSC 103
TWA AWSSC
Sbjct: 135 TWARRAWSSC 106
Score = 24.0 bits (46), Expect(4) = 2e-055
Identities = 9/11 (81%), Positives = 10/11 (90%)
Frame = -1 / -2
Query: 100 RPPATRSIPMA 68
+ PATRSIPMA
Sbjct: 102 KTPATRSIPMA 70
Score = 24.0 bits (46), Expect(4) = 1e-032
Identities = 10/12 (83%), Positives = 10/12 (83%)
Frame = +2 / +2
Query: 104 QEDQAHGAQVRR 139
QEDQA AQVRR
Sbjct: 107 QEDQARRAQVRR 142
Score = 22.6 bits (43), Expect(2) = 1e-034
Identities = 9/12 (75%), Positives = 10/12 (83%)
Frame = -1 / -1
Query: 133 DLGAVRLVFLLR 98
DLGA RLV LL+
Sbjct: 136 DLGATRLVLLLK 101
Score = 22.6 bits (43), Expect(3) = e-100
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = +3 / +2
Query: 69 AMGIDLVAG 95
AMGIDLVAG
Sbjct: 71 AMGIDLVAG 97
>gb|CK125500.1|CK125500 BES1824108m14 BES1824 Hordeum vulgare subsp. vulgare cDNA clone
MPMGp2010M148 5-PRIME, mRNA sequence
Length = 692
Score = 205 bits (442), Expect(3) = 2e-099
Identities = 83/95 (87%), Positives = 89/95 (93%)
Frame = +3 / +2
Query: 303 IAVIVGTVTDDKRISEVPAMKVCALRFTETARARIINAGGECLTFDQLALRAPLGQNTVL 482
IAV+VGT+TDD RI E+PAMKV ALRFTETARARI+NAGGECLTFDQLALRAP G+NT+L
Sbjct: 308 IAVVVGTITDDMRIQEIPAMKVTALRFTETARARIVNAGGECLTFDQLALRAPTGENTIL 487
Query: 483 LRGPKNAREAVRHFGPAPGVPHSHTKPYVRSKGRK 587
LRGPKNAREA RHFG APGVPHSHTKPYVRSKGRK
Sbjct: 488 LRGPKNAREAGRHFGKAPGVPHSHTKPYVRSKGRK 592
Score = 162 bits (349), Expect(3) = 2e-099
Identities = 70/83 (84%), Positives = 75/83 (90%)
Frame = +3 / +2
Query: 69 AMGIDLVAGGRNKKTKRTAPKSDDVYLKLLVKLYRFLVRRTKSNFNAVILKRLFMSKTNR 248
AMGIDLVAGGRNK+TKR APKSDDVYLKLLVKLYRFLVRRTKS FNAVILKRLFMSKTNR
Sbjct: 71 AMGIDLVAGGRNKRTKRVAPKSDDVYLKLLVKLYRFLVRRTKSKFNAVILKRLFMSKTNR 250
Query: 249 PPLSMRRLVRFMEGKGDQIAVIV 317
PPLSMRRL FM+GK ++ +V
Sbjct: 251 PPLSMRRLSNFMKGKEEKNIAVV 319
Score = 157 bits (338), Expect(4) = 5e-061
Identities = 72/91 (79%), Positives = 75/91 (82%)
Frame = -1 / -3
Query: 574 ERT*GLVWL*GTPGAGPKCLTASLAFLGPLSRTVFCPSGARSASWSKVRHSPPALMILAL 395
ERT*GLVWL GTPGA PKCL AS AFLGPL+R VF P GAR ASWSKVRHSPPAL ILAL
Sbjct: 579 ERT*GLVWLCGTPGALPKCLPASRAFLGPLNRIVFSPVGARRASWSKVRHSPPALTILAL 400
Query: 394 AVSVNLSAQTFIAGTSLILLSSVTVPTITAI 302
AVSVNL A TFIAG S I +SSV VPT TA+
Sbjct: 399 AVSVNLRAVTFIAGISWIRMSSVIVPTTTAM 307
Score = 117 bits (250), Expect = 9e-026
Identities = 51/98 (52%), Positives = 66/98 (67%)
Frame = -3 / -2
Query: 584 PTLRANIRLGVAVRHSWCRPEVPDSFPSVLRTPQQNRVLPKWGTERELVEGEALSASIDD 405
PTL A+I LGVAVRH+ EVP +L +PQQ+RVLP W TE +LV+ EAL SID+
Sbjct: 589 PTLGAHIGLGVAVRHTRSLAEVPPRLTGILGSPQQDRVLPSWSTESKLVKSEALPTSIDN 410
Query: 404 PGPRCLSEPERADLHRRHLADPLVVGHGAHNHGDLITL 291
P PRCL EP+ +LH L DP V+ A+NH +++ L
Sbjct: 409 PCPRCLCEPQSGNLHCWDLLDPHVICDCANNHSNVLLL 296
Score = 92.7 bits (196), Expect(3) = 2e-026
Identities = 48/89 (53%), Positives = 51/89 (57%)
Frame = -1 / -3
Query: 334 SSVTVPTITAI*SPFPSMNLTRRRIESGGRLVLLMKRRLRITALKLLFVXXXXXXXXXXX 155
S + T S FP M L RRR+ESGGRLVLLMK LR+TAL LL V
Sbjct: 336 SVIVPTTTAMFFSSFPFMKLERRRMESGGRLVLLMKSLLRMTALNLLLVLLTRKR*SLTR 157
Query: 154 XXXXXXSDLGAVRLVFLLRPPATRSIPMA 68
SDLGA RLV L PPATRSIPMA
Sbjct: 156 SLRYTSSDLGATRLVLLFLPPATRSIPMA 70
Score = 73.0 bits (153), Expect(4) = 3e-028
Identities = 27/54 (50%), Positives = 33/54 (61%)
Frame = +2 / +1
Query: 314 CGHRDRRQEDQRGAGDEGLRAQVH*DSEGQDHQCWRRVPHLRPARAPCPTWAKH 475
C H R D R +EG R++VH DSEG+D QCW VPH PA +PC W +H
Sbjct: 319 CWHNHR*HADPRDPSNEGYRSEVHRDSEGKDCQCWWGVPHF*PACSPCSNWGEH 480
Score = 69.8 bits (146), Expect(4) = 5e-061
Identities = 30/43 (69%), Positives = 33/43 (76%)
Frame = -3 / -2
Query: 302 LITLPLHEPDEAAHRERRAVGLAHEEALEDHGVEVALCPAHKE 174
L+ L LHE E AH ERRAVGLAHEE LED GVE+AL P H+E
Sbjct: 304 LLLLSLHEVGETAHGERRAVGLAHEEPLEDDGVELALGPPHQE 176
Score = 41.4 bits (84), Expect(4) = 5e-061
Identities = 14/21 (66%), Positives = 15/21 (71%)
Frame = -2 / -1
Query: 132 TWAPCAWSSCCGRRLRDRYPW 70
TWA AWSSC R+ R RYPW
Sbjct: 134 TWARRAWSSCSSRQRRGRYPW 72
Score = 41.4 bits (84), Expect(4) = 3e-028
Identities = 23/44 (52%), Positives = 25/44 (56%)
Frame = +1 / +3
Query: 454 VPHLGKTRFC*GVLRTLGKLSGTSGLHQECLTATPSLMFARRVG 585
V LG+TR C*G R + GTS C TATPS M A RVG
Sbjct: 459 VLQLGRTRSC*GDPRMPVRRGGTSARLLVCRTATPSPMCAPRVG 590
Score = 37.3 bits (75), Expect(3) = 2e-026
Identities = 14/23 (60%), Positives = 15/23 (65%)
Frame = -2 / -1
Query: 585 SYPSSEHKAWCGCEALLVQARSA 517
SYP S H+AWCGC A RSA
Sbjct: 590 SYPWSAHRAWCGCAAHQEPCRSA 522
Score = 35.4 bits (71), Expect(4) = 3e-028
Identities = 15/36 (41%), Positives = 19/36 (52%)
Frame = +2 / +1
Query: 188 DKEQLQRRDPQAPLHEXXXXXXXXXXXXRQVHGGEG 295
D+EQ+QRR PQ LHE Q+H G+G
Sbjct: 190 DQEQVQRRHPQEALHEQDQPPAALHAPSLQLHEGKG 297
Score = 34.5 bits (69), Expect(3) = 2e-099
Identities = 15/18 (83%), Positives = 15/18 (83%)
Frame = +3 / +3
Query: 585 KFEKARGRRNSRGFKV*V 638
KFE ARGR NSRGF V*V
Sbjct: 591 KFEXARGRXNSRGFXV*V 644
Score = 30.4 bits (60), Expect(4) = 3e-028
Identities = 13/23 (56%), Positives = 14/23 (60%)
Frame = +2 / +1
Query: 71 HGYXXXXXXPQQEDQAHGAQVRR 139
HGY +QEDQA AQVRR
Sbjct: 73 HGYRPRRWREEQEDQARRAQVRR 141
Score = 26.7 bits (52), Expect(3) = 2e-026
Identities = 17/37 (45%), Positives = 18/37 (48%)
Frame = -2 / -1
Query: 489 PSAEPCFAQVGHXXXXXXXXGTLRQH**SWPSLSQ*T 379
PS C Q+ H GT QH* S PSLS *T
Sbjct: 494 PSTGSCSPQLEHGEQAGQK*GTPHQH*QSLPSLSL*T 384
Score = 23.1 bits (44), Expect(4) = 5e-061
Identities = 10/18 (55%), Positives = 14/18 (77%)
Frame = -3 / -1
Query: 638 HLDLEAPAVPPSSRLLKL 585
+L+LEA AV P++ LKL
Sbjct: 644 NLNLEATAVXPTTSXLKL 591
>gb|BG343847.1|BG343847 HVSMEg0006O16f Hordeum vulgare pre-anthesis spike EST library
HVcDNA0008 (white to yellow anther) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEg0006O16f, mRNA sequence
Length = 987
Score = 204 bits (439), Expect(3) = 5e-099
Identities = 82/93 (88%), Positives = 88/93 (94%)
Frame = +3 / +2
Query: 303 IAVIVGTVTDDKRISEVPAMKVCALRFTETARARIINAGGECLTFDQLALRAPLGQNTVL 482
IAV+VGT+TDD RI E+PAMKV ALRFTETARARI+NAGGECLTFDQLALRAP G+NT+L
Sbjct: 311 IAVVVGTITDDMRIQEIPAMKVTALRFTETARARIVNAGGECLTFDQLALRAPTGENTIL 490
Query: 483 LRGPKNAREAVRHFGPAPGVPHSHTKPYVRSKG 581
LRGPKNAREAVRHFG APGVPHSHTKPYVRSKG
Sbjct: 491 LRGPKNAREAVRHFGKAPGVPHSHTKPYVRSKG 589
Score = 162 bits (349), Expect(3) = 5e-099
Identities = 70/83 (84%), Positives = 75/83 (90%)
Frame = +3 / +2
Query: 69 AMGIDLVAGGRNKKTKRTAPKSDDVYLKLLVKLYRFLVRRTKSNFNAVILKRLFMSKTNR 248
AMGIDLVAGGRNK+TKR APKSDDVYLKLLVKLYRFLVRRTKS FNAVILKRLFMSKTNR
Sbjct: 74 AMGIDLVAGGRNKRTKRVAPKSDDVYLKLLVKLYRFLVRRTKSKFNAVILKRLFMSKTNR 253
Query: 249 PPLSMRRLVRFMEGKGDQIAVIV 317
PPLSMRRL FM+GK ++ +V
Sbjct: 254 PPLSMRRLSNFMKGKEEKNIAVV 322
Score = 160 bits (344), Expect(3) = 2e-060
Identities = 73/91 (80%), Positives = 76/91 (83%)
Frame = -1 / -1
Query: 574 ERT*GLVWL*GTPGAGPKCLTASLAFLGPLSRTVFCPSGARSASWSKVRHSPPALMILAL 395
ERT*GLVWL GTPGA PKCLTAS AFLGPL+R VF P GAR ASWSKVRHSPPAL ILAL
Sbjct: 582 ERT*GLVWLCGTPGALPKCLTASRAFLGPLNRIVFSPVGARRASWSKVRHSPPALTILAL 403
Query: 394 AVSVNLSAQTFIAGTSLILLSSVTVPTITAI 302
AVSVNL A TFIAG S I +SSV VPT TA+
Sbjct: 402 AVSVNLRAVTFIAGISWIRMSSVIVPTTTAM 310
Score = 114 bits (243), Expect = 8e-025
Identities = 50/97 (51%), Positives = 65/97 (67%)
Frame = -3 / -3
Query: 581 TLRANIRLGVAVRHSWCRPEVPDSFPSVLRTPQQNRVLPKWGTERELVEGEALSASIDDP 402
TL A+I LGVAVRH+ EVP +L +PQQ+RVLP W TE +LV+ EAL SID+P
Sbjct: 589 TLGAHIGLGVAVRHTRSLAEVPHRLTGILGSPQQDRVLPSWSTESKLVKSEALPTSIDNP 410
Query: 401 GPRCLSEPERADLHRRHLADPLVVGHGAHNHGDLITL 291
PRCL EP+ +LH L DP V+ A+NH +++ L
Sbjct: 409 CPRCLCEPQSGNLHCWDLLDPHVICDCANNHSNVLLL 299
Score = 92.7 bits (196), Expect(3) = 7e-026
Identities = 48/89 (53%), Positives = 51/89 (57%)
Frame = -1 / -1
Query: 334 SSVTVPTITAI*SPFPSMNLTRRRIESGGRLVLLMKRRLRITALKLLFVXXXXXXXXXXX 155
S + T S FP M L RRR+ESGGRLVLLMK LR+TAL LL V
Sbjct: 339 SVIVPTTTAMFFSSFPFMKLERRRMESGGRLVLLMKSLLRMTALNLLLVLLTRKR*SLTR 160
Query: 154 XXXXXXSDLGAVRLVFLLRPPATRSIPMA 68
SDLGA RLV L PPATRSIPMA
Sbjct: 159 SLRYTSSDLGATRLVLLFLPPATRSIPMA 73
Score = 73.0 bits (153), Expect(4) = 7e-027
Identities = 27/54 (50%), Positives = 33/54 (61%)
Frame = +2 / +1
Query: 314 CGHRDRRQEDQRGAGDEGLRAQVH*DSEGQDHQCWRRVPHLRPARAPCPTWAKH 475
C H R D R +EG R++VH DSEG+D QCW VPH PA +PC W +H
Sbjct: 322 CWHNHR*HADPRDPSNEGYRSEVHRDSEGKDCQCWWGVPHF*PACSPCSNWGEH 483
Score = 69.8 bits (146), Expect(3) = 2e-060
Identities = 30/43 (69%), Positives = 33/43 (76%)
Frame = -3 / -3
Query: 302 LITLPLHEPDEAAHRERRAVGLAHEEALEDHGVEVALCPAHKE 174
L+ L LHE E AH ERRAVGLAHEE LED GVE+AL P H+E
Sbjct: 307 LLLLSLHEVGETAHGERRAVGLAHEEPLEDDGVELALGPPHQE 179
Score = 41.4 bits (84), Expect(3) = 2e-060
Identities = 14/21 (66%), Positives = 15/21 (71%)
Frame = -2 / -2
Query: 132 TWAPCAWSSCCGRRLRDRYPW 70
TWA AWSSC R+ R RYPW
Sbjct: 137 TWARRAWSSCSSRQRRGRYPW 75
Score = 36.8 bits (74), Expect(4) = 7e-027
Identities = 22/43 (51%), Positives = 24/43 (55%)
Frame = +1 / +3
Query: 454 VPHLGKTRFC*GVLRTLGKLSGTSGLHQECLTATPSLMFARRV 582
V LG+TR C*G R + GTS C TATPS M A RV
Sbjct: 462 VLQLGRTRSC*GDPRMPVRR*GTSARLLVCRTATPSPMCAPRV 590
Score = 35.4 bits (71), Expect(3) = 7e-026
Identities = 13/22 (59%), Positives = 14/22 (63%)
Frame = -2 / -2
Query: 582 YPSSEHKAWCGCEALLVQARSA 517
YP S H+AWCGC A RSA
Sbjct: 590 YPWSAHRAWCGCAAHQEPCRSA 525
Score = 35.4 bits (71), Expect(4) = 7e-027
Identities = 15/36 (41%), Positives = 19/36 (52%)
Frame = +2 / +1
Query: 188 DKEQLQRRDPQAPLHEXXXXXXXXXXXXRQVHGGEG 295
D+EQ+QRR PQ LHE Q+H G+G
Sbjct: 193 DQEQVQRRHPQEALHEQDQPPAALHAPSLQLHEGKG 300
Score = 34.5 bits (69), Expect(3) = 5e-099
Identities = 16/27 (59%), Positives = 18/27 (66%)
Frame = +3 / +3
Query: 561 PYVRSKGRKFEKARGRRNSRGFKV*VA 641
P + K EKARG RNSRG +V*VA
Sbjct: 570 PMCAPRVXKXEKARGXRNSRGLQV*VA 650
Score = 30.4 bits (60), Expect(4) = 7e-027
Identities = 13/23 (56%), Positives = 14/23 (60%)
Frame = +2 / +1
Query: 71 HGYXXXXXXPQQEDQAHGAQVRR 139
HGY +QEDQA AQVRR
Sbjct: 76 HGYRPRRWREEQEDQARRAQVRR 144
Score = 26.7 bits (52), Expect(3) = 7e-026
Identities = 17/37 (45%), Positives = 18/37 (48%)
Frame = -2 / -2
Query: 489 PSAEPCFAQVGHXXXXXXXXGTLRQH**SWPSLSQ*T 379
PS C Q+ H GT QH* S PSLS *T
Sbjct: 497 PSTGSCSPQLEHGEQAGQK*GTPHQH*QSLPSLSL*T 387
>gb|BU971281.1|BU971281 HB17C13r BC Hordeum vulgare subsp. vulgare cDNA clone HB17C13
5-PRIME, mRNA sequence
Length = 505
Score = 360 bits (780), Expect = 7e-099
Identities = 151/164 (92%), Positives = 159/164 (96%)
Frame = +3 / +3
Query: 144 YLKLLVKLYRFLVRRTKSNFNAVILKRLFMSKTNRPPLSMRRLVRFMEGKGDQIAVIVGT 323
YLKLLVKLYRFLVRRTKS FNAVILKRLFMSKTNRPPLSMRRLVRFM+GK D+IAVIVGT
Sbjct: 12 YLKLLVKLYRFLVRRTKSQFNAVILKRLFMSKTNRPPLSMRRLVRFMDGKADKIAVIVGT 191
Query: 324 VTDDKRISEVPAMKVCALRFTETARARIINAGGECLTFDQLALRAPLGQNTVLLRGPKNA 503
+TDD+R+ E+PAMKV ALRFTETARARI+NAGGECLTFDQLALRAPLGQNT+LLRGPKNA
Sbjct: 192 ITDDQRVYEIPAMKVAALRFTETARARIVNAGGECLTFDQLALRAPLGQNTLLLRGPKNA 371
Query: 504 REAVRHFGPAPGVPHSHTKPYVRSKGRKFEKARGRRNSRGFKV* 635
REAVRHFG APGVPHSHTKPYVRSKGRKFEKARGRRNSRGFKV*
Sbjct: 372 REAVRHFGKAPGVPHSHTKPYVRSKGRKFEKARGRRNSRGFKV* 503
Score = 249 bits (539), Expect = 1e-065
Identities = 105/155 (67%), Positives = 124/155 (80%)
Frame = -3 / -3
Query: 635 LDLEAPAVPPSSRLLKLPTLRANIRLGVAVRHSWCRPEVPDSFPSVLRTPQQNRVLPKWG 456
L+LEAPAVPPSS LL+ P L A+I LGVAV HSW +VP+SFP VL TPQ+ RVL K
Sbjct: 503 LNLEAPAVPPSSCLLEFPALGADIWLGVAVWHSWSFAKVPNSFPGVLGTPQEKRVLSKRS 324
Query: 455 TERELVEGEALSASIDDPGPRCLSEPERADLHRRHLADPLVVGHGAHNHGDLITLPLHEP 276
TE ELV+G+AL+ S+D+PGPR L EPER LH R+L DPLV+G GAH+H DL+ LP+HEP
Sbjct: 323 TEGELVKGKALATSVDNPGPRRLGEPERGHLHCRYLVDPLVIGDGAHDHSDLVRLPIHEP 144
Query: 275 DEAAHRERRAVGLAHEEALEDHGVEVALCPAHKEA 171
DEAAHRERR V LAHEE L+DHGVE+AL P H+EA
Sbjct: 143 DEAAHRERRPVCLAHEEPLQDHGVELALGPPHQEA 39
Score = 234 bits (505), Expect = 6e-061
Identities = 108/129 (83%), Positives = 109/129 (84%)
Frame = -1 / -1
Query: 574 ERT*GLVWL*GTPGAGPKCLTASLAFLGPLSRTVFCPSGARSASWSKVRHSPPALMILAL 395
ERT GLVWL GTPGA PKCLTASLAFLGPL R+VFCPSGAR ASWSKVRHSPPAL ILAL
Sbjct: 442 ERTYGLVWLCGTPGALPKCLTASLAFLGPLRRSVFCPSGARRASWSKVRHSPPALTILAL 263
Query: 394 AVSVNLSAQTFIAGTSLILLSSVTVPTITAI*SPFPSMNLTRRRIESGGRLVLLMKRRLR 215
AVSVNLSA TFIAG S L SSV VPTITAI S FPSMNLTRRRIESGGR VLLMK R R
Sbjct: 262 AVSVNLSAATFIAGIS*TLWSSVMVPTITAILSAFPSMNLTRRRIESGGRFVLLMKSRFR 83
Query: 214 ITALKLLFV 188
ITAL L V
Sbjct: 82 ITALNWLLV 56
Score = 143 bits (307), Expect = 1e-033
Identities = 64/127 (50%), Positives = 73/127 (57%)
Frame = +2 / +2
Query: 188 DKEQLQRRDPQAPLHEXXXXXXXXXXXXRQVHGGEG*SDRRDCGHRDRRQEDQRGAGDEG 367
D+E +QRRDP+A LHE RQVHG EG DR D GH R E R G+EG
Sbjct: 56 DQEPVQRRDPEAALHEQDKPAAALDAPPRQVHGWEGGQDRCDRGHHHR*PEGLRDTGNEG 235
Query: 368 LRAQVH*DSEGQDHQCWRRVPHLRPARAPCPTWAKHXXXXXXXXXXXXCQALRACTRSAS 547
RAQVH D EGQD Q W RVP+L PAR PC W +H C AL +RSA+
Sbjct: 236 GRAQVHRDGEGQDCQRWWRVPYL*PARPPCSAWTEHASPEGSQERQGSC*ALWQSSRSAT 415
Query: 548 QPHQALC 568
QPHQA+C
Sbjct: 416 QPHQAIC 436
>gb|BU976861.1|BU976861 HA10H03r HA Hordeum vulgare subsp. vulgare cDNA clone HA10H03
5-PRIME, mRNA sequence
Length = 607
Score = 217 bits (469), Expect(2) = 1e-098
Identities = 88/99 (88%), Positives = 94/99 (94%)
Frame = +3 / +2
Query: 303 IAVIVGTVTDDKRISEVPAMKVCALRFTETARARIINAGGECLTFDQLALRAPLGQNTVL 482
IAV+VGT+TDD RI E+PAMKV ALRFTETARARI+NAGGECLTFDQLALRAP G+NT+L
Sbjct: 311 IAVVVGTITDDMRIQEIPAMKVTALRFTETARARIVNAGGECLTFDQLALRAPTGENTIL 490
Query: 483 LRGPKNAREAVRHFGPAPGVPHSHTKPYVRSKGRKFEKA 599
LRGPKNAREAVRHFG APGVPHSHTKPYVRSKGRKFEKA
Sbjct: 491 LRGPKNAREAVRHFGKAPGVPHSHTKPYVRSKGRKFEKA 607
Score = 162 bits (349), Expect(2) = 1e-098
Identities = 70/83 (84%), Positives = 75/83 (90%)
Frame = +3 / +2
Query: 69 AMGIDLVAGGRNKKTKRTAPKSDDVYLKLLVKLYRFLVRRTKSNFNAVILKRLFMSKTNR 248
AMGIDLVAGGRNK+TKR APKSDDVYLKLLVKLYRFLVRRTKS FNAVILKRLFMSKTNR
Sbjct: 74 AMGIDLVAGGRNKRTKRVAPKSDDVYLKLLVKLYRFLVRRTKSKFNAVILKRLFMSKTNR 253
Query: 249 PPLSMRRLVRFMEGKGDQIAVIV 317
PPLSMRRL FM+GK ++ +V
Sbjct: 254 PPLSMRRLSNFMKGKEEKNIAVV 322
Score = 160 bits (344), Expect(3) = 2e-060
Identities = 73/91 (80%), Positives = 76/91 (83%)
Frame = -1 / -2
Query: 574 ERT*GLVWL*GTPGAGPKCLTASLAFLGPLSRTVFCPSGARSASWSKVRHSPPALMILAL 395
ERT*GLVWL GTPGA PKCLTAS AFLGPL+R VF P GAR ASWSKVRHSPPAL ILAL
Sbjct: 582 ERT*GLVWLCGTPGALPKCLTASRAFLGPLNRIVFSPVGARRASWSKVRHSPPALTILAL 403
Query: 394 AVSVNLSAQTFIAGTSLILLSSVTVPTITAI 302
AVSVNL A TFIAG S I +SSV VPT TA+
Sbjct: 402 AVSVNLRAVTFIAGISWIRMSSVIVPTTTAM 310
Score = 125 bits (267), Expect = 4e-028
Identities = 55/102 (53%), Positives = 70/102 (68%)
Frame = -3 / -1
Query: 596 LLKLPTLRANIRLGVAVRHSWCRPEVPDSFPSVLRTPQQNRVLPKWGTERELVEGEALSA 417
LLKLPTL A+I LGVAVRH+ EVP +L +PQQ+RVLP W TE +LV+ EAL
Sbjct: 604 LLKLPTLGAHIGLGVAVRHTRSLAEVPHRLTGILGSPQQDRVLPSWSTESKLVKSEALPT 425
Query: 416 SIDDPGPRCLSEPERADLHRRHLADPLVVGHGAHNHGDLITL 291
SID+P PRCL EP+ +LH L DP V+ A+NH +++ L
Sbjct: 424 SIDNPCPRCLCEPQSGNLHCWDLLDPHVICDCANNHSNVLLL 299
Score = 92.7 bits (196), Expect(3) = 1e-027
Identities = 48/89 (53%), Positives = 51/89 (57%)
Frame = -1 / -2
Query: 334 SSVTVPTITAI*SPFPSMNLTRRRIESGGRLVLLMKRRLRITALKLLFVXXXXXXXXXXX 155
S + T S FP M L RRR+ESGGRLVLLMK LR+TAL LL V
Sbjct: 339 SVIVPTTTAMFFSSFPFMKLERRRMESGGRLVLLMKSLLRMTALNLLLVLLTRKR*SLTR 160
Query: 154 XXXXXXSDLGAVRLVFLLRPPATRSIPMA 68
SDLGA RLV L PPATRSIPMA
Sbjct: 159 SLRYTSSDLGATRLVLLFLPPATRSIPMA 73
Score = 73.0 bits (153), Expect(4) = 4e-030
Identities = 27/54 (50%), Positives = 33/54 (61%)
Frame = +2 / +1
Query: 314 CGHRDRRQEDQRGAGDEGLRAQVH*DSEGQDHQCWRRVPHLRPARAPCPTWAKH 475
C H R D R +EG R++VH DSEG+D QCW VPH PA +PC W +H
Sbjct: 322 CWHNHR*HADPRDPSNEGYRSEVHRDSEGKDCQCWWGVPHF*PACSPCSNWGEH 483
Score = 69.8 bits (146), Expect(3) = 2e-060
Identities = 30/43 (69%), Positives = 33/43 (76%)
Frame = -3 / -1
Query: 302 LITLPLHEPDEAAHRERRAVGLAHEEALEDHGVEVALCPAHKE 174
L+ L LHE E AH ERRAVGLAHEE LED GVE+AL P H+E
Sbjct: 307 LLLLSLHEVGETAHGERRAVGLAHEEPLEDDGVELALGPPHQE 179
Score = 47.8 bits (98), Expect(4) = 4e-030
Identities = 27/48 (56%), Positives = 29/48 (60%)
Frame = +1 / +3
Query: 454 VPHLGKTRFC*GVLRTLGKLSGTSGLHQECLTATPSLMFARRVGSLRR 597
V LG+TR C*G R + GTS C TATPS M A RVGSLRR
Sbjct: 462 VLQLGRTRSC*GDPRMPVRR*GTSARLLVCRTATPSPMCAPRVGSLRR 605
Score = 41.8 bits (85), Expect(3) = 1e-027
Identities = 16/25 (64%), Positives = 17/25 (68%)
Frame = -2 / -3
Query: 591 QTSYPSSEHKAWCGCEALLVQARSA 517
QTSYP S H+AWCGC A RSA
Sbjct: 599 QTSYPWSAHRAWCGCAAHQEPCRSA 525
Score = 41.4 bits (84), Expect(3) = 2e-060
Identities = 14/21 (66%), Positives = 15/21 (71%)
Frame = -2 / -3
Query: 132 TWAPCAWSSCCGRRLRDRYPW 70
TWA AWSSC R+ R RYPW
Sbjct: 137 TWARRAWSSCSSRQRRGRYPW 75
Score = 35.4 bits (71), Expect(4) = 4e-030
Identities = 15/36 (41%), Positives = 19/36 (52%)
Frame = +2 / +1
Query: 188 DKEQLQRRDPQAPLHEXXXXXXXXXXXXRQVHGGEG 295
D+EQ+QRR PQ LHE Q+H G+G
Sbjct: 193 DQEQVQRRHPQEALHEQDQPPAALHAPSLQLHEGKG 300
Score = 30.4 bits (60), Expect(4) = 4e-030
Identities = 13/23 (56%), Positives = 14/23 (60%)
Frame = +2 / +1
Query: 71 HGYXXXXXXPQQEDQAHGAQVRR 139
HGY +QEDQA AQVRR
Sbjct: 76 HGYRPRRWREEQEDQARRAQVRR 144
Score = 26.7 bits (52), Expect(3) = 1e-027
Identities = 17/37 (45%), Positives = 18/37 (48%)
Frame = -2 / -3
Query: 489 PSAEPCFAQVGHXXXXXXXXGTLRQH**SWPSLSQ*T 379
PS C Q+ H GT QH* S PSLS *T
Sbjct: 497 PSTGSCSPQLEHGEQAGQK*GTPHQH*QSLPSLSL*T 387
Database: Hordeum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:16 PM
Number of letters in database: 175,134,539
Number of sequences in database: 312,970
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 351,215,188
Number of Sequences: 312970
Number of extensions: 5129222
Number of successful extensions: 61121
Number of sequences better than 1.0e-020: 274
length of database: 58,378,179
effective HSP length: 52
effective length of database: 42,103,739
effective search space used: 10062793621
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)