TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2192909.2.3
(674 letters)
Database: Hordeum_nucl_with_EST.fasta
312,970 sequences; 175,134,539 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BU969768.1|BU969768 HB12J07r BC Hordeum vulgare subsp. v... 236 1e-061
gb|CB874364.1|CB874364 HX05A22w HX Hordeum vulgare subsp. v... 236 1e-061
gb|BG345064.2|BG345064 HVSMEg0018I07f Hordeum vulgare pre-a... 235 2e-061
gb|BI957043.1|BI957043 HVSMEn0007B24f Hordeum vulgare rachi... 234 3e-061
gb|BI959354.1|BI959354 HVSMEn0019F13f Hordeum vulgare rachi... 234 3e-061
gb|BI959736.1|BI959736 HVSMEn0021B08f Hordeum vulgare rachi... 234 3e-061
gb|BI959887.1|BI959887 HVSMEn0022D15f Hordeum vulgare rachi... 233 6e-061
gb|BF259059.3|BF259059 HVSMEf0017I24f Hordeum vulgare seedl... 228 3e-059
gb|BI960224.1|BI960224 HVSMEn0023M14f Hordeum vulgare rachi... 227 4e-059
gb|BF260117.2|BF260117 HVSMEf0021C12f Hordeum vulgare seedl... 227 5e-059
gb|BQ762437.1|BQ762437 EBro01_SQ005_H23_R root, 3 week, hyd... 130 2e-058
gb|CB881059.1|CB881059 HM08K10w HM Hordeum vulgare subsp. v... 224 3e-058
gb|AL501186.1|AL501186 AL501186 Hordeum vulgare Barke roots... 180 2e-055
gb|AL511495.1|AL511495 AL511495 Hordeum vulgare Barke devel... 206 8e-055
gb|CB882078.1|CB882078 HM11M20w HM Hordeum vulgare subsp. v... 206 2e-053
gb|BI960616.1|BI960616 HVSMEn0025G07f Hordeum vulgare rachi... 205 2e-052
gb|BQ661663.1|BQ661663 HM04K24u HM Hordeum vulgare subsp. v... 201 3e-051
gb|AL503031.1|AL503031 AL503031 Hordeum vulgare Barke roots... 183 4e-051
gb|BM443031.2|BM443031 EBro02_SQ002_E04_R root, 3 week, hyd... 198 2e-050
gb|BF257679.2|BF257679 HVSMEf0013I17f Hordeum vulgare seedl... 196 1e-049
gb|CK122964.1|CK122964 BES1824101i06 BES1824 Hordeum vulgar... 192 2e-048
gb|BQ661260.1|BQ661260 HM02K23u HM Hordeum vulgare subsp. v... 191 4e-048
gb|BU997286.1|BU997286 HI07I07r HI Hordeum vulgare subsp. v... 188 2e-047
gb|BF257029.2|BF257029 HVSMEf0011K17f Hordeum vulgare seedl... 179 1e-044
gb|AV917656.1|AV917656 AV917656 K. Sato unpublished cDNA li... 178 3e-044
gb|AV918498.1|AV918498 AV918498 K. Sato unpublished cDNA li... 178 3e-044
gb|AV920163.1|AV920163 AV920163 K. Sato unpublished cDNA li... 178 3e-044
gb|AV921873.1|AV921873 AV921873 K. Sato unpublished cDNA li... 178 3e-044
gb|AV930818.1|AV930818 AV930818 K. Sato unpublished cDNA li... 178 3e-044
gb|BJ466353.1|BJ466353 BJ466353 K. Sato unpublished cDNA li... 178 3e-044
gb|BJ466470.1|BJ466470 BJ466470 K. Sato unpublished cDNA li... 178 3e-044
gb|BJ466471.1|BJ466471 BJ466471 K. Sato unpublished cDNA li... 178 3e-044
gb|BJ466778.1|BJ466778 BJ466778 K. Sato unpublished cDNA li... 178 3e-044
gb|BJ468102.1|BJ468102 BJ468102 K. Sato unpublished cDNA li... 178 3e-044
gb|BQ657250.1|BQ657250 HA09B21u HA Hordeum vulgare subsp. v... 178 3e-044
gb|BQ756546.1|BQ756546 EBem09_SQ003_A13_R embryo, 1 Day ger... 177 8e-044
gb|BF260877.2|BF260877 HVSMEf0023C21f Hordeum vulgare seedl... 175 3e-043
gb|BF256678.3|BF256678 HVSMEf0010L01f Hordeum vulgare seedl... 175 3e-043
gb|BQ472105.1|BQ472105 HV04G21r HV Hordeum vulgare subsp. v... 175 3e-043
gb|AJ462914.1|AJ462914 AJ462914 S00002 Hordeum vulgare subs... 173 1e-042
gb|AL501895.1|AL501895 AL501895 Hordeum vulgare Barke roots... 172 2e-042
gb|BF255126.2|BF255126 HVSMEf0006A10f Hordeum vulgare seedl... 170 6e-042
gb|AJ462915.1|AJ462915 AJ462915 S00002 Hordeum vulgare subs... 167 6e-041
gb|AL505163.1|AL505163 AL505163 Hordeum vulgare Barke roots... 166 1e-040
gb|BM817348.1|BM817348 HC105H12_T3.ab1 HC Hordeum vulgare s... 162 2e-039
gb|AJ433184.1|AJ433184 AJ433184 S00002 Hordeum vulgare subs... 160 7e-039
gb|BQ768004.1|BQ768004 EBro08_SQ010_M12_R root, 3 week, dro... 158 3e-038
gb|BQ760872.1|BQ760872 EBro03_SQ003_L10_R root, 3 week, wat... 156 9e-038
gb|BI956488.1|BI956488 HVSMEn0003K24f Hordeum vulgare rachi... 114 3e-037
gb|BQ662057.1|BQ662057 HR01G02u HR Hordeum vulgare subsp. v... 150 6e-036
gb|AJ462913.1|AJ462913 AJ462913 S00002 Hordeum vulgare subs... 149 2e-035
gb|AL503024.1|AL503024 AL503024 Hordeum vulgare Barke roots... 145 2e-034
gb|CB881619.1|CB881619 HM10F21w HM Hordeum vulgare subsp. v... 144 6e-034
gb|AJ462910.1|AJ462910 AJ462910 S00002 Hordeum vulgare subs... 143 9e-034
gb|AL505122.1|AL505122 AL505122 Hordeum vulgare Barke roots... 143 1e-033
gb|AL501253.1|AL501253 AL501253 Hordeum vulgare Barke roots... 136 1e-031
gb|BF257544.2|BF257544 HVSMEf0013D06f Hordeum vulgare seedl... 135 2e-031
gb|BQ471958.1|BQ471958 HV03P22r HV Hordeum vulgare subsp. v... 134 5e-031
gb|BF254437.3|BF254437 HVSMEf0004A08f Hordeum vulgare seedl... 133 7e-031
gb|AL500065.1|AL500065 AL500065 Hordeum vulgare Barke etiol... 111 1e-030
gb|AL502439.1|AL502439 AL502439 Hordeum vulgare Barke roots... 129 1e-029
gb|BE421983.1|BE421983 HWM018cA.04r ITEC HWM Barley Leaf Li... 127 6e-029
gb|AL511163.1|AL511163 AL511163 Hordeum vulgare Barke devel... 127 6e-029
gb|BM444496.1|BM444496 EBem09_SQ005_H02_R embryo, 1 Day ger... 127 6e-029
gb|AV836827.1|AV836827 AV836827 K. Sato unpublished cDNA li... 109 2e-027
gb|BQ664689.1|BQ664689 HV04G21u HV Hordeum vulgare subsp. v... 117 6e-026
gb|BF263008.3|BF263008 HV_CEa0005I22f Hordeum vulgare seedl... 105 9e-025
gb|BQ664590.1|BQ664590 HV03P22u HV Hordeum vulgare subsp. v... 112 2e-024
gb|U43498.1|HVU43498 Hordeum vulgare 0-methyltransferase mR... 99 5e-023
gb|AV922546.1|AV922546 AV922546 K. Sato unpublished cDNA li... 99 5e-023
gb|AV917798.1|AV917798 AV917798 K. Sato unpublished cDNA li... 99 5e-023
gb|BJ467726.1|BJ467726 BJ467726 K. Sato unpublished cDNA li... 99 5e-023
gb|AV922569.1|AV922569 AV922569 K. Sato unpublished cDNA li... 99 5e-023
gb|BJ468391.1|BJ468391 BJ468391 K. Sato unpublished cDNA li... 99 5e-023
gb|AV918770.1|AV918770 AV918770 K. Sato unpublished cDNA li... 99 5e-023
gb|AV920187.1|AV920187 AV920187 K. Sato unpublished cDNA li... 99 5e-023
gb|AV921423.1|AV921423 AV921423 K. Sato unpublished cDNA li... 99 5e-023
gb|AV920093.1|AV920093 AV920093 K. Sato unpublished cDNA li... 99 5e-023
gb|BJ468293.1|BJ468293 BJ468293 K. Sato unpublished cDNA li... 99 5e-023
gb|AV921300.1|AV921300 AV921300 K. Sato unpublished cDNA li... 99 5e-023
gb|AV920132.1|AV920132 AV920132 K. Sato unpublished cDNA li... 99 5e-023
gb|BJ465651.1|BJ465651 BJ465651 K. Sato unpublished cDNA li... 99 5e-023
gb|AV917391.1|AV917391 AV917391 K. Sato unpublished cDNA li... 99 5e-023
gb|AV930903.1|AV930903 AV930903 K. Sato unpublished cDNA li... 99 5e-023
gb|AV921717.1|AV921717 AV921717 K. Sato unpublished cDNA li... 99 5e-023
gb|AV921750.1|AV921750 AV921750 K. Sato unpublished cDNA li... 99 5e-023
gb|AV918052.1|AV918052 AV918052 K. Sato unpublished cDNA li... 99 5e-023
gb|AV920718.1|AV920718 AV920718 K. Sato unpublished cDNA li... 99 5e-023
gb|AV921493.1|AV921493 AV921493 K. Sato unpublished cDNA li... 99 5e-023
gb|AV917726.1|AV917726 AV917726 K. Sato unpublished cDNA li... 99 5e-023
gb|AV920270.1|AV920270 AV920270 K. Sato unpublished cDNA li... 99 5e-023
gb|BJ467613.1|BJ467613 BJ467613 K. Sato unpublished cDNA li... 99 5e-023
gb|AV918207.1|AV918207 AV918207 K. Sato unpublished cDNA li... 99 5e-023
gb|AV919503.1|AV919503 AV919503 K. Sato unpublished cDNA li... 99 5e-023
gb|BJ465999.1|BJ465999 BJ465999 K. Sato unpublished cDNA li... 99 5e-023
gb|AV921326.1|AV921326 AV921326 K. Sato unpublished cDNA li... 99 5e-023
gb|BJ466487.1|BJ466487 BJ466487 K. Sato unpublished cDNA li... 99 5e-023
gb|BJ467518.1|BJ467518 BJ467518 K. Sato unpublished cDNA li... 99 5e-023
gb|AV916289.1|AV916289 AV916289 K. Sato unpublished cDNA li... 99 5e-023
gb|AV913720.1|AV913720 AV913720 K. Sato unpublished cDNA li... 99 5e-023
gb|AV918761.1|AV918761 AV918761 K. Sato unpublished cDNA li... 99 5e-023
gb|AV919115.1|AV919115 AV919115 K. Sato unpublished cDNA li... 99 5e-023
gb|CA016587.1|CA016587 HV08D09u HV Hordeum vulgare subsp. v... 99 5e-023
gb|BJ465916.1|BJ465916 BJ465916 K. Sato unpublished cDNA li... 99 5e-023
gb|CA015766.1|CA015766 HV12D16u HV Hordeum vulgare subsp. v... 99 5e-023
gb|BJ465776.1|BJ465776 BJ465776 K. Sato unpublished cDNA li... 99 5e-023
gb|AV914737.1|AV914737 AV914737 K. Sato unpublished cDNA li... 99 5e-023
gb|AV922403.1|AV922403 AV922403 K. Sato unpublished cDNA li... 99 5e-023
gb|CA016078.1|CA016078 HV10B12u HV Hordeum vulgare subsp. v... 99 5e-023
gb|AV919834.1|AV919834 AV919834 K. Sato unpublished cDNA li... 99 5e-023
gb|AV930125.1|AV930125 AV930125 K. Sato unpublished cDNA li... 99 5e-023
gb|AV922333.1|AV922333 AV922333 K. Sato unpublished cDNA li... 98 1e-022
gb|AJ461125.1|AJ461125 AJ461125 S00002 Hordeum vulgare subs... 105 2e-022
gb|AV917637.1|AV917637 AV917637 K. Sato unpublished cDNA li... 99 2e-022
gb|AV918629.1|AV918629 AV918629 K. Sato unpublished cDNA li... 96 5e-022
gb|AV918321.1|AV918321 AV918321 K. Sato unpublished cDNA li... 96 5e-022
gb|AV922266.1|AV922266 AV922266 K. Sato unpublished cDNA li... 95 6e-022
gb|BF256785.2|BF256785 HVSMEf0011A04f Hordeum vulgare seedl... 84 6e-022
gb|AJ462916.1|AJ462916 AJ462916 S00002 Hordeum vulgare subs... 100 8e-021
>gb|BU969768.1|BU969768 HB12J07r BC Hordeum vulgare subsp. vulgare cDNA clone HB12J07
5-PRIME, mRNA sequence
Length = 488
Score = 236 bits (509), Expect = 1e-061
Identities = 95/118 (80%), Positives = 103/118 (87%)
Frame = -1 / +3
Query: 674 PAGDAILMKWILHDWSDAHCATLLKNCYDALPENGKVIVVECVLPVNTEATPKAQGVFHV 495
P+GDAILMKWILHDWSD HCATLLKNCYDALP +GKV++VEC+LPVN EATPKAQGVFHV
Sbjct: 60 PSGDAILMKWILHDWSDEHCATLLKNCYDALPAHGKVVLVECILPVNPEATPKAQGVFHV 239
Query: 494 DMIMLAHNPGGKERYEREFRELAKGAGFSGFKATYIYANAWAIEFIK*IRLPPSPR*D 321
DMIMLAHNPGG+ERYEREF LAKGAGF+ K TYIYANA+AIEF K*I P *D
Sbjct: 240 DMIMLAHNPGGRERYEREFEALAKGAGFAAMKTTYIYANAFAIEFTK*IHGNRPPI*D 413
Score = 171 bits (367), Expect = 5e-042
Identities = 72/86 (83%), Positives = 76/86 (88%)
Frame = +1 / -2
Query: 412 KPAPLASSRNSRSYRSLPPGLCASMIMSTWNTPCALGVASVLTGSTHSTTMTLPFSGSAS 591
KPAPLA + NS SY SLPPGLCASMIMSTWNTPCALGVAS TG HST+ TLP +GSAS
Sbjct: 322 KPAPLARASNSLSYLSLPPGLCASMIMSTWNTPCALGVASGFTGRMHSTSTTLPCAGSAS 143
Query: 592 *QFLSSVAQCASLQSWRIHFMRMASP 669
*QFLSSVAQC+SLQSWRIHFMRMASP
Sbjct: 142 *QFLSSVAQCSSLQSWRIHFMRMASP 65
>gb|CB874364.1|CB874364 HX05A22w HX Hordeum vulgare subsp. vulgare cDNA clone HX05A22
3-PRIME, mRNA sequence
Length = 646
Score = 236 bits (509), Expect = 1e-061
Identities = 95/118 (80%), Positives = 103/118 (87%)
Frame = -1 / -2
Query: 674 PAGDAILMKWILHDWSDAHCATLLKNCYDALPENGKVIVVECVLPVNTEATPKAQGVFHV 495
P+GDAILMKWILHDWSD HCATLLKNCYDALP +GKV++VEC+LPVN EATPKAQGVFHV
Sbjct: 558 PSGDAILMKWILHDWSDEHCATLLKNCYDALPAHGKVVLVECILPVNPEATPKAQGVFHV 379
Query: 494 DMIMLAHNPGGKERYEREFRELAKGAGFSGFKATYIYANAWAIEFIK*IRLPPSPR*D 321
DMIMLAHNPGG+ERYEREF LAKGAGF+ K TYIYANA+AIEF K*I P *D
Sbjct: 378 DMIMLAHNPGGRERYEREFEALAKGAGFAAMKTTYIYANAFAIEFTK*IHGNRPPI*D 205
Score = 171 bits (367), Expect = 5e-042
Identities = 72/86 (83%), Positives = 76/86 (88%)
Frame = +1 / +2
Query: 412 KPAPLASSRNSRSYRSLPPGLCASMIMSTWNTPCALGVASVLTGSTHSTTMTLPFSGSAS 591
KPAPLA + NS SY SLPPGLCASMIMSTWNTPCALGVAS TG HST+ TLP +GSAS
Sbjct: 296 KPAPLARASNSLSYLSLPPGLCASMIMSTWNTPCALGVASGFTGRMHSTSTTLPCAGSAS 475
Query: 592 *QFLSSVAQCASLQSWRIHFMRMASP 669
*QFLSSVAQC+SLQSWRIHFMRMASP
Sbjct: 476 *QFLSSVAQCSSLQSWRIHFMRMASP 553
>gb|BG345064.2|BG345064 HVSMEg0018I07f Hordeum vulgare pre-anthesis spike EST library
HVcDNA0008 (white to yellow anther) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEg0018I07f, mRNA sequence
Length = 621
Score = 235 bits (507), Expect = 2e-061
Identities = 92/109 (84%), Positives = 100/109 (91%)
Frame = -1 / +3
Query: 674 PAGDAILMKWILHDWSDAHCATLLKNCYDALPENGKVIVVECVLPVNTEATPKAQGVFHV 495
P+GDAILMKWILHDWSD HCATLLKNCYDALP +GKV++VEC+LPVN EATPKAQGVFHV
Sbjct: 48 PSGDAILMKWILHDWSDEHCATLLKNCYDALPAHGKVVLVECILPVNPEATPKAQGVFHV 227
Query: 494 DMIMLAHNPGGKERYEREFRELAKGAGFSGFKATYIYANAWAIEFIK*I 348
DMIMLAHNPGG+ERYEREF LAKGAGF+ K TYIYANA+AIEF K*I
Sbjct: 228 DMIMLAHNPGGRERYEREFEALAKGAGFAAMKTTYIYANAFAIEFTK*I 374
Score = 171 bits (367), Expect = 5e-042
Identities = 72/86 (83%), Positives = 76/86 (88%)
Frame = +1 / -3
Query: 412 KPAPLASSRNSRSYRSLPPGLCASMIMSTWNTPCALGVASVLTGSTHSTTMTLPFSGSAS 591
KPAPLA + NS SY SLPPGLCASMIMSTWNTPCALGVAS TG HST+ TLP +GSAS
Sbjct: 310 KPAPLARASNSLSYLSLPPGLCASMIMSTWNTPCALGVASGFTGRMHSTSTTLPCAGSAS 131
Query: 592 *QFLSSVAQCASLQSWRIHFMRMASP 669
*QFLSSVAQC+SLQSWRIHFMRMASP
Sbjct: 130 *QFLSSVAQCSSLQSWRIHFMRMASP 53
>gb|BI957043.1|BI957043 HVSMEn0007B24f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0007B24f, mRNA sequence
Length = 876
Score = 234 bits (506), Expect = 3e-061
Identities = 90/109 (82%), Positives = 99/109 (90%)
Frame = -1 / -1
Query: 674 PAGDAILMKWILHDWSDAHCATLLKNCYDALPENGKVIVVECVLPVNTEATPKAQGVFHV 495
P+GDAILMKWILHDWSD HCATLLKNCYDALP +GKV++VEC+LPVN EATP+ QGVFHV
Sbjct: 519 PSGDAILMKWILHDWSDEHCATLLKNCYDALPAHGKVVLVECILPVNPEATPEVQGVFHV 340
Query: 494 DMIMLAHNPGGKERYEREFRELAKGAGFSGFKATYIYANAWAIEFIK*I 348
DMIMLAHNPGG+ERYEREF LAKGAGF+ K TYIYANAWAIEF K*+
Sbjct: 339 DMIMLAHNPGGRERYEREFEALAKGAGFAAMKTTYIYANAWAIEFTK*M 193
Score = 162 bits (348), Expect = 2e-039
Identities = 68/85 (80%), Positives = 72/85 (84%)
Frame = +1 / +2
Query: 415 PAPLASSRNSRSYRSLPPGLCASMIMSTWNTPCALGVASVLTGSTHSTTMTLPFSGSAS* 594
PAPLA + NS SY SLPPGLCASMIMSTWNTPC GVAS TG HST+ TLP +G AS*
Sbjct: 260 PAPLARASNSLSYLSLPPGLCASMIMSTWNTPCTSGVASGFTGRMHSTSTTLPCAGKAS* 439
Query: 595 QFLSSVAQCASLQSWRIHFMRMASP 669
QFLSSVAQC+SLQSWRIHFMRMASP
Sbjct: 440 QFLSSVAQCSSLQSWRIHFMRMASP 514
>gb|BI959354.1|BI959354 HVSMEn0019F13f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0019F13f, mRNA sequence
Length = 648
Score = 234 bits (506), Expect = 3e-061
Identities = 90/109 (82%), Positives = 99/109 (90%)
Frame = -1 / -3
Query: 674 PAGDAILMKWILHDWSDAHCATLLKNCYDALPENGKVIVVECVLPVNTEATPKAQGVFHV 495
P+GDAILMKWILHDWSD HCATLLKNCYDALP +GKV++VEC+LPVN EATP+ QGVFHV
Sbjct: 421 PSGDAILMKWILHDWSDEHCATLLKNCYDALPAHGKVVLVECILPVNPEATPEVQGVFHV 242
Query: 494 DMIMLAHNPGGKERYEREFRELAKGAGFSGFKATYIYANAWAIEFIK*I 348
DMIMLAHNPGG+ERYEREF LAKGAGF+ K TYIYANAWAIEF K*+
Sbjct: 241 DMIMLAHNPGGRERYEREFEALAKGAGFAAMKTTYIYANAWAIEFTK*M 95
Score = 162 bits (348), Expect = 2e-039
Identities = 68/85 (80%), Positives = 72/85 (84%)
Frame = +1 / +3
Query: 415 PAPLASSRNSRSYRSLPPGLCASMIMSTWNTPCALGVASVLTGSTHSTTMTLPFSGSAS* 594
PAPLA + NS SY SLPPGLCASMIMSTWNTPC GVAS TG HST+ TLP +G AS*
Sbjct: 162 PAPLARASNSLSYLSLPPGLCASMIMSTWNTPCTSGVASGFTGRMHSTSTTLPCAGKAS* 341
Query: 595 QFLSSVAQCASLQSWRIHFMRMASP 669
QFLSSVAQC+SLQSWRIHFMRMASP
Sbjct: 342 QFLSSVAQCSSLQSWRIHFMRMASP 416
>gb|BI959736.1|BI959736 HVSMEn0021B08f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0021B08f, mRNA sequence
Length = 654
Score = 234 bits (506), Expect = 3e-061
Identities = 90/109 (82%), Positives = 99/109 (90%)
Frame = -1 / +3
Query: 674 PAGDAILMKWILHDWSDAHCATLLKNCYDALPENGKVIVVECVLPVNTEATPKAQGVFHV 495
P+GDAILMKWILHDWSD HCATLLKNCYDALP +GKV++VEC+LPVN EATP+ QGVFHV
Sbjct: 288 PSGDAILMKWILHDWSDEHCATLLKNCYDALPAHGKVVLVECILPVNPEATPEVQGVFHV 467
Query: 494 DMIMLAHNPGGKERYEREFRELAKGAGFSGFKATYIYANAWAIEFIK*I 348
DMIMLAHNPGG+ERYEREF LAKGAGF+ K TYIYANAWAIEF K*+
Sbjct: 468 DMIMLAHNPGGRERYEREFEALAKGAGFAAMKTTYIYANAWAIEFTK*M 614
Score = 162 bits (348), Expect = 2e-039
Identities = 68/85 (80%), Positives = 72/85 (84%)
Frame = +1 / -3
Query: 415 PAPLASSRNSRSYRSLPPGLCASMIMSTWNTPCALGVASVLTGSTHSTTMTLPFSGSAS* 594
PAPLA + NS SY SLPPGLCASMIMSTWNTPC GVAS TG HST+ TLP +G AS*
Sbjct: 547 PAPLARASNSLSYLSLPPGLCASMIMSTWNTPCTSGVASGFTGRMHSTSTTLPCAGKAS* 368
Query: 595 QFLSSVAQCASLQSWRIHFMRMASP 669
QFLSSVAQC+SLQSWRIHFMRMASP
Sbjct: 367 QFLSSVAQCSSLQSWRIHFMRMASP 293
>gb|BI959887.1|BI959887 HVSMEn0022D15f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0022D15f, mRNA sequence
Length = 661
Score = 233 bits (504), Expect = 6e-061
Identities = 90/109 (82%), Positives = 98/109 (89%)
Frame = -1 / -2
Query: 674 PAGDAILMKWILHDWSDAHCATLLKNCYDALPENGKVIVVECVLPVNTEATPKAQGVFHV 495
P GDAILMKWILHDWSD HCATLLKNCYDALP +GKV++VEC+LPVN EATP+ QGVFHV
Sbjct: 546 PPGDAILMKWILHDWSDEHCATLLKNCYDALPAHGKVVLVECILPVNPEATPEVQGVFHV 367
Query: 494 DMIMLAHNPGGKERYEREFRELAKGAGFSGFKATYIYANAWAIEFIK*I 348
DMIMLAHNPGG+ERYEREF LAKGAGF+ K TYIYANAWAIEF K*+
Sbjct: 366 DMIMLAHNPGGRERYEREFEALAKGAGFAAMKTTYIYANAWAIEFTK*M 220
Score = 162 bits (348), Expect = 2e-039
Identities = 68/85 (80%), Positives = 72/85 (84%)
Frame = +1 / +2
Query: 415 PAPLASSRNSRSYRSLPPGLCASMIMSTWNTPCALGVASVLTGSTHSTTMTLPFSGSAS* 594
PAPLA + NS SY SLPPGLCASMIMSTWNTPC GVAS TG HST+ TLP +G AS*
Sbjct: 287 PAPLARASNSLSYLSLPPGLCASMIMSTWNTPCTSGVASGFTGRMHSTSTTLPCAGKAS* 466
Query: 595 QFLSSVAQCASLQSWRIHFMRMASP 669
QFLSSVAQC+SLQSWRIHFMRMASP
Sbjct: 467 QFLSSVAQCSSLQSWRIHFMRMASP 541
>gb|BF259059.3|BF259059 HVSMEf0017I24f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEf0017I24f, mRNA sequence
Length = 645
Score = 228 bits (492), Expect = 3e-059
Identities = 88/109 (80%), Positives = 98/109 (89%)
Frame = -1 / +3
Query: 674 PAGDAILMKWILHDWSDAHCATLLKNCYDALPENGKVIVVECVLPVNTEATPKAQGVFHV 495
P+GDAILMKWILHDWSD HCATLLKNCYDALP +GKV++VEC+LPVN EATPKAQGVF++
Sbjct: 78 PSGDAILMKWILHDWSDEHCATLLKNCYDALPAHGKVVLVECILPVNPEATPKAQGVFNL 257
Query: 494 DMIMLAHNPGGKERYEREFRELAKGAGFSGFKATYIYANAWAIEFIK*I 348
DMIMLAHNP G+ERYEREF LAKG GF+ KATYIYANAWAIE K*+
Sbjct: 258 DMIMLAHNPSGRERYEREFEALAKGGGFASIKATYIYANAWAIELTK*M 404
Score = 146 bits (313), Expect = 1e-034
Identities = 66/85 (77%), Positives = 70/85 (82%)
Frame = +1 / -3
Query: 415 PAPLASSRNSRSYRSLPPGLCASMIMSTWNTPCALGVASVLTGSTHSTTMTLPFSGSAS* 594
P PLA + NS SY SLP GLCASMIMS NTPCALGVAS LTG HST+ TLP +GSAS*
Sbjct: 337 PPPLARASNSLSYLSLPLGLCASMIMSRLNTPCALGVASGLTGRMHSTSTTLPCAGSAS* 158
Query: 595 QFLSSVAQCASLQSWRIHFMRMASP 669
QF SSVAQC+SLQS RIHFMRMASP
Sbjct: 157 QFFSSVAQCSSLQS*RIHFMRMASP 83
>gb|BI960224.1|BI960224 HVSMEn0023M14f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0023M14f, mRNA sequence
Length = 648
Score = 227 bits (491), Expect = 4e-059
Identities = 87/109 (79%), Positives = 97/109 (88%)
Frame = -1 / +2
Query: 674 PAGDAILMKWILHDWSDAHCATLLKNCYDALPENGKVIVVECVLPVNTEATPKAQGVFHV 495
P+GDAILMKWILHDWSD HCATLLKNCYDALP +GKV++VEC+LPVN EATP+ QGVFHV
Sbjct: 311 PSGDAILMKWILHDWSDEHCATLLKNCYDALPAHGKVVLVECILPVNPEATPEVQGVFHV 490
Query: 494 DMIMLAHNPGGKERYEREFRELAKGAGFSGFKATYIYANAWAIEFIK*I 348
DMIMLAHNPGG+ERYEREF L +GAG + K TYIYANAWAIEF K*+
Sbjct: 491 DMIMLAHNPGGRERYEREFEALXQGAGVAAMKTTYIYANAWAIEFTK*M 637
Score = 157 bits (338), Expect = 5e-038
Identities = 66/85 (77%), Positives = 70/85 (82%)
Frame = +1 / -1
Query: 415 PAPLASSRNSRSYRSLPPGLCASMIMSTWNTPCALGVASVLTGSTHSTTMTLPFSGSAS* 594
PAP + NS SY SLPPGLCASMIMSTWNTPC GVAS TG HST+ TLP +G AS*
Sbjct: 570 PAPWXRASNSLSYLSLPPGLCASMIMSTWNTPCTSGVASGFTGRMHSTSTTLPCAGKAS* 391
Query: 595 QFLSSVAQCASLQSWRIHFMRMASP 669
QFLSSVAQC+SLQSWRIHFMRMASP
Sbjct: 390 QFLSSVAQCSSLQSWRIHFMRMASP 316
>gb|BF260117.2|BF260117 HVSMEf0021C12f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEf0021C12f, mRNA sequence
Length = 797
Score = 227 bits (490), Expect = 5e-059
Identities = 88/109 (80%), Positives = 97/109 (88%)
Frame = -1 / +1
Query: 674 PAGDAILMKWILHDWSDAHCATLLKNCYDALPENGKVIVVECVLPVNTEATPKAQGVFHV 495
P+GDAILMKWILHDWSD HCATLLKNCYDALP +GKV++VEC+LPVN EATP+ QGVFHV
Sbjct: 217 PSGDAILMKWILHDWSDEHCATLLKNCYDALPAHGKVVLVECILPVNPEATPEVQGVFHV 396
Query: 494 DMIMLAHNPGGKERYEREFRELAKGAGFSGFKATYIYANAWAIEFIK*I 348
DMIMLAHNPGG+ERYEREF LA GAGF+ K TYIYANAWAIE K*+
Sbjct: 397 DMIMLAHNPGGRERYEREFEALAXGAGFAVMKTTYIYANAWAIEVTK*M 543
Score = 162 bits (348), Expect = 2e-039
Identities = 68/85 (80%), Positives = 72/85 (84%)
Frame = +1 / -1
Query: 415 PAPLASSRNSRSYRSLPPGLCASMIMSTWNTPCALGVASVLTGSTHSTTMTLPFSGSAS* 594
PAPLA + NS SY SLPPGLCASMIMSTWNTPC GVAS TG HST+ TLP +G AS*
Sbjct: 476 PAPLARASNSLSYLSLPPGLCASMIMSTWNTPCTSGVASGFTGRMHSTSTTLPCAGKAS* 297
Query: 595 QFLSSVAQCASLQSWRIHFMRMASP 669
QFLSSVAQC+SLQSWRIHFMRMASP
Sbjct: 296 QFLSSVAQCSSLQSWRIHFMRMASP 222
>gb|BQ762437.1|BQ762437 EBro01_SQ005_H23_R root, 3 week, hydroponic grown, no treatment, cv
Optic, EBro01 Hordeum vulgare subsp. vulgare cDNA clone
EBro01_SQ005_H23 5', mRNA sequence
Length = 643
Score = 130 bits (278), Expect(2) = 2e-058
Identities = 48/56 (85%), Positives = 53/56 (94%)
Frame = -1 / +1
Query: 674 PAGDAILMKWILHDWSDAHCATLLKNCYDALPENGKVIVVECVLPVNTEATPKAQG 507
P+GDAILMKWILHDWSD HCATLLKNCYDALP +GKV++VEC+LPVN EATPKAQG
Sbjct: 70 PSGDAILMKWILHDWSDEHCATLLKNCYDALPAHGKVVLVECILPVNPEATPKAQG 237
Score = 115 bits (246), Expect(2) = 2e-058
Identities = 49/67 (73%), Positives = 54/67 (80%)
Frame = -1 / +2
Query: 521 PKAQGVFHVDMIMLAHNPGGKERYEREFRELAKGAGFSGFKATYIYANAWAIEFIK*IRL 342
P+ +GVFHVDMIMLAHNPGG+ERYEREF LAKGAGF+ K TYIYANA+AIEF K*I
Sbjct: 224 PRRRGVFHVDMIMLAHNPGGRERYEREFEALAKGAGFAAMKTTYIYANAFAIEFTK*IHG 403
Query: 341 PPSPR*D 321
P *D
Sbjct: 404 NRPPI*D 424
Score = 106 bits (226), Expect(2) = 6e-039
Identities = 45/54 (83%), Positives = 48/54 (88%)
Frame = +1 / -3
Query: 508 PCALGVASVLTGSTHSTTMTLPFSGSAS*QFLSSVAQCASLQSWRIHFMRMASP 669
PCALGVAS TG HST+ TLP +GSAS*QFLSSVAQC+SLQSWRIHFMRMASP
Sbjct: 236 PCALGVASGFTGRMHSTSTTLPCAGSAS*QFLSSVAQCSSLQSWRIHFMRMASP 75
Score = 74.4 bits (156), Expect(2) = 6e-039
Identities = 30/37 (81%), Positives = 31/37 (83%)
Frame = +1 / -2
Query: 412 KPAPLASSRNSRSYRSLPPGLCASMIMSTWNTPCALG 522
KPAPLA + NS SY SLPPGLCASMIMSTWNTP LG
Sbjct: 333 KPAPLARASNSLSYLSLPPGLCASMIMSTWNTPLRLG 223
>gb|CB881059.1|CB881059 HM08K10w HM Hordeum vulgare subsp. vulgare cDNA clone HM08K10
3-PRIME, mRNA sequence
Length = 590
Score = 224 bits (484), Expect = 3e-058
Identities = 91/114 (79%), Positives = 98/114 (85%)
Frame = -1 / -3
Query: 662 AILMKWILHDWSDAHCATLLKNCYDALPENGKVIVVECVLPVNTEATPKAQGVFHVDMIM 483
AILMKWILHDWSD HCATLLKNCYDALP +GKV++VEC+LPVN EATPKAQGVFHVDMIM
Sbjct: 588 AILMKWILHDWSDEHCATLLKNCYDALPAHGKVVLVECILPVNPEATPKAQGVFHVDMIM 409
Query: 482 LAHNPGGKERYEREFRELAKGAGFSGFKATYIYANAWAIEFIK*IRLPPSPR*D 321
LAHNPGG+ERYEREF AKGAGF+ K TYIYANA+AIEF K*I P *D
Sbjct: 408 LAHNPGGRERYEREFEAXAKGAGFAAMKTTYIYANAFAIEFTK*IHGNRPPI*D 247
Score = 166 bits (357), Expect = 1e-040
Identities = 70/84 (83%), Positives = 74/84 (88%)
Frame = +1 / +2
Query: 412 KPAPLASSRNSRSYRSLPPGLCASMIMSTWNTPCALGVASVLTGSTHSTTMTLPFSGSAS 591
KPAPLA + NS SY SLPPGLCASMIMSTWNTPCALGVAS TG HST+ TLP +GSAS
Sbjct: 338 KPAPLAXASNSLSYLSLPPGLCASMIMSTWNTPCALGVASGFTGRMHSTSTTLPCAGSAS 517
Query: 592 *QFLSSVAQCASLQSWRIHFMRMA 663
*QFLSSVAQC+SLQSWRIHFMRMA
Sbjct: 518 *QFLSSVAQCSSLQSWRIHFMRMA 589
>gb|AL501186.1|AL501186 AL501186 Hordeum vulgare Barke roots Hordeum vulgare subsp. vulgare
cDNA clone HW03F14u 3', mRNA sequence
Length = 635
Score = 180 bits (388), Expect(2) = 2e-055
Identities = 75/96 (78%), Positives = 82/96 (85%)
Frame = -1 / -2
Query: 608 LLKNCYDALPENGKVIVVECVLPVNTEATPKAQGVFHVDMIMLAHNPGGKERYEREFREL 429
LLKNCYDALP +GKV++VEC+LPVN EATPKAQGVFHVDMIMLAHNPGG+ERYEREF L
Sbjct: 487 LLKNCYDALPAHGKVVLVECILPVNPEATPKAQGVFHVDMIMLAHNPGGRERYEREFEAL 308
Query: 428 AKGAGFSGFKATYIYANAWAIEFIK*IRLPPSPR*D 321
AKGAGF+ K TYIYANA+AIEF K*I P *D
Sbjct: 307 AKGAGFAAMKTTYIYANAFAIEFTK*IHGNRPPI*D 200
Score = 121 bits (259), Expect(2) = 2e-035
Identities = 52/65 (80%), Positives = 55/65 (84%)
Frame = +1 / +3
Query: 412 KPAPLASSRNSRSYRSLPPGLCASMIMSTWNTPCALGVASVLTGSTHSTTMTLPFSGSAS 591
KPAPLA + NS SY SLPPGLCASMIMSTWNTPCALGVAS TG HST+ TLP +GSAS
Sbjct: 291 KPAPLARASNSLSYLSLPPGLCASMIMSTWNTPCALGVASGFTGRMHSTSTTLPCAGSAS 470
Query: 592 *QFLS 606
*QFLS
Sbjct: 471 *QFLS 485
Score = 55.6 bits (115), Expect(2) = 2e-055
Identities = 19/23 (82%), Positives = 20/23 (86%)
Frame = -1 / -1
Query: 674 PAGDAILMKWILHDWSDAHCATL 606
P+GDAI MKWI HDWSD HCATL
Sbjct: 554 PSGDAIXMKWIXHDWSDEHCATL 486
Score = 47.3 bits (97), Expect(2) = 2e-035
Identities = 18/22 (81%), Positives = 20/22 (90%)
Frame = +1 / +1
Query: 604 SSVAQCASLQSWRIHFMRMASP 669
+SVAQC+SLQSW IHFM MASP
Sbjct: 484 ASVAQCSSLQSWXIHFMXMASP 549
>gb|AL511495.1|AL511495 AL511495 Hordeum vulgare Barke developing caryopsis (3.-15.DAP)
Hordeum vulgare subsp. vulgare cDNA clone HY08E03u 3',
mRNA sequence
Length = 522
Score = 206 bits (445), Expect(2) = 8e-055
Identities = 85/108 (78%), Positives = 92/108 (85%)
Frame = -1 / -3
Query: 644 ILHDWSDAHCATLLKNCYDALPENGKVIVVECVLPVNTEATPKAQGVFHVDMIMLAHNPG 465
ILHDWSD HCATLLKN YDALP +GKV++VEC+LPVN EATPKAQGVFHVDMIMLAHNPG
Sbjct: 466 ILHDWSDEHCATLLKNXYDALPAHGKVVLVECILPVNPEATPKAQGVFHVDMIMLAHNPG 287
Query: 464 GKERYEREFRELAKGAGFSGFKATYIYANAWAIEFIK*IRLPPSPR*D 321
G+ERYEREF LAKGAGF+ K TYIYANA+AIEF K*I P *D
Sbjct: 286 GRERYEREFEALAKGAGFAAMKTTYIYANAFAIEFTK*IHGNRPPI*D 143
Score = 148 bits (318), Expect(2) = 9e-037
Identities = 63/78 (80%), Positives = 67/78 (85%)
Frame = +1 / +3
Query: 412 KPAPLASSRNSRSYRSLPPGLCASMIMSTWNTPCALGVASVLTGSTHSTTMTLPFSGSAS 591
KPAPLA + NS SY SLPPGLCASMIMSTWNTPCALGVAS TG HST+ TLP +GSAS
Sbjct: 234 KPAPLARASNSLSYLSLPPGLCASMIMSTWNTPCALGVASGFTGRMHSTSTTLPCAGSAS 413
Query: 592 *QFLSSVAQCASLQSWRI 645
QFLSSVAQC+SLQSWRI
Sbjct: 414 XQFLSSVAQCSSLQSWRI 467
Score = 27.2 bits (53), Expect(2) = 8e-055
Identities = 9/10 (90%), Positives = 10/10 (100%)
Frame = -1 / -2
Query: 674 PAGDAILMKW 645
P+GDAILMKW
Sbjct: 497 PSGDAILMKW 468
Score = 24.9 bits (48), Expect(2) = 9e-037
Identities = 9/10 (90%), Positives = 9/10 (90%)
Frame = +3 / +3
Query: 645 PLHEDGVAGG 674
PLHEDGVA G
Sbjct: 468 PLHEDGVARG 497
>gb|CB882078.1|CB882078 HM11M20w HM Hordeum vulgare subsp. vulgare cDNA clone HM11M20
3-PRIME, mRNA sequence
Length = 492
Score = 206 bits (445), Expect(2) = 2e-053
Identities = 85/108 (78%), Positives = 92/108 (85%)
Frame = -1 / -3
Query: 644 ILHDWSDAHCATLLKNCYDALPENGKVIVVECVLPVNTEATPKAQGVFHVDMIMLAHNPG 465
ILHDWSD HCATLLKN YDALP +GKV++VEC+LPVN EATPKAQGVFHVDMIMLAHNPG
Sbjct: 427 ILHDWSDEHCATLLKNXYDALPAHGKVVLVECILPVNPEATPKAQGVFHVDMIMLAHNPG 248
Query: 464 GKERYEREFRELAKGAGFSGFKATYIYANAWAIEFIK*IRLPPSPR*D 321
G+ERYEREF LAKGAGF+ K TYIYANA+AIEF K*I P *D
Sbjct: 247 GRERYEREFEALAKGAGFAAMKTTYIYANAFAIEFTK*IHGNRPPI*D 104
Score = 148 bits (318), Expect(2) = 3e-036
Identities = 63/78 (80%), Positives = 67/78 (85%)
Frame = +1 / +3
Query: 412 KPAPLASSRNSRSYRSLPPGLCASMIMSTWNTPCALGVASVLTGSTHSTTMTLPFSGSAS 591
KPAPLA + NS SY SLPPGLCASMIMSTWNTPCALGVAS TG HST+ TLP +GSAS
Sbjct: 195 KPAPLARASNSLSYLSLPPGLCASMIMSTWNTPCALGVASGFTGRMHSTSTTLPCAGSAS 374
Query: 592 *QFLSSVAQCASLQSWRI 645
QFLSSVAQC+SLQSWRI
Sbjct: 375 XQFLSSVAQCSSLQSWRI 428
Score = 23.1 bits (44), Expect(2) = 3e-036
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = +1 / +2
Query: 646 HFMRMASP 669
HFMRMASP
Sbjct: 428 HFMRMASP 451
Score = 22.1 bits (42), Expect(2) = 2e-053
Identities = 8/9 (88%), Positives = 9/9 (100%)
Frame = -1 / -1
Query: 674 PAGDAILMK 648
P+GDAILMK
Sbjct: 456 PSGDAILMK 430
>gb|BI960616.1|BI960616 HVSMEn0025G07f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0025G07f, mRNA sequence
Length = 641
Score = 205 bits (443), Expect = 2e-052
Identities = 78/97 (80%), Positives = 86/97 (88%)
Frame = -1 / +3
Query: 674 PAGDAILMKWILHDWSDAHCATLLKNCYDALPENGKVIVVECVLPVNTEATPKAQGVFHV 495
P+GDAILMKWILHDWSD HCATLLKNCYDALP +GKV++VEC+LPVN EATP+ QGVFHV
Sbjct: 351 PSGDAILMKWILHDWSDEHCATLLKNCYDALPAHGKVVLVECILPVNPEATPEVQGVFHV 530
Query: 494 DMIMLAHNPGGKERYEREFRELAKGAGFSGFKATYIY 384
DMIMLAHNPGG+ERY REF LAKGAGF K TY+Y
Sbjct: 531 DMIMLAHNPGGRERY*REFEALAKGAGFPAMKTTYLY 641
Score = 158 bits (340), Expect = 2e-038
Identities = 67/85 (78%), Positives = 71/85 (83%)
Frame = +1 / -2
Query: 415 PAPLASSRNSRSYRSLPPGLCASMIMSTWNTPCALGVASVLTGSTHSTTMTLPFSGSAS* 594
PAPLA + NS Y SLPPGLCASMIMSTWNTPC GVAS TG HST+ TLP +G AS*
Sbjct: 610 PAPLARASNSL*YLSLPPGLCASMIMSTWNTPCTSGVASGFTGRMHSTSTTLPCAGKAS* 431
Query: 595 QFLSSVAQCASLQSWRIHFMRMASP 669
QFLSSVAQC+SLQSWRIHFMRMASP
Sbjct: 430 QFLSSVAQCSSLQSWRIHFMRMASP 356
>gb|BQ661663.1|BQ661663 HM04K24u HM Hordeum vulgare subsp. vulgare cDNA clone HM04K24
3-PRIME, mRNA sequence
Length = 559
Score = 201 bits (434), Expect = 3e-051
Identities = 82/104 (78%), Positives = 89/104 (85%)
Frame = -1 / -3
Query: 632 WSDAHCATLLKNCYDALPENGKVIVVECVLPVNTEATPKAQGVFHVDMIMLAHNPGGKER 453
WSD HCATLLKNCYDALP +GKV++VEC+LPVN EATPKAQGVFHVDMIMLAHNPGG+ER
Sbjct: 557 WSDEHCATLLKNCYDALPAHGKVVLVECILPVNPEATPKAQGVFHVDMIMLAHNPGGRER 378
Query: 452 YEREFRELAKGAGFSGFKATYIYANAWAIEFIK*IRLPPSPR*D 321
YEREF LAKGAGF+ K TYIYANA+AIEF K*I P *D
Sbjct: 377 YEREFEALAKGAGFAAMKTTYIYANAFAIEFTK*IHGNRPPI*D 246
Score = 139 bits (299), Expect = 1e-032
Identities = 60/74 (81%), Positives = 64/74 (86%)
Frame = +1 / +1
Query: 412 KPAPLASSRNSRSYRSLPPGLCASMIMSTWNTPCALGVASVLTGSTHSTTMTLPFSGSAS 591
KPAPLA + NS SY SLPPGLCASMIMSTWNTPCALGVAS TG HST+ TLP +GSAS
Sbjct: 337 KPAPLARASNSLSYLSLPPGLCASMIMSTWNTPCALGVASGFTGRMHSTSTTLPCAGSAS 516
Query: 592 *QFLSSVAQCASLQ 633
*QFLSSVAQC+SLQ
Sbjct: 517 *QFLSSVAQCSSLQ 558
>gb|AL503031.1|AL503031 AL503031 Hordeum vulgare Barke roots Hordeum vulgare subsp. vulgare
cDNA clone HW09H24u 3', mRNA sequence
Length = 573
Score = 183 bits (395), Expect(2) = 4e-051
Identities = 73/92 (79%), Positives = 81/92 (88%)
Frame = -1 / -3
Query: 623 AHCATLLKNCYDALPENGKVIVVECVLPVNTEATPKAQGVFHVDMIMLAHNPGGKERYER 444
A ATLLKNCYDALP +GKV++VEC+LPVN EATP+ QGVFHVDMIMLAHNPGG+ERYER
Sbjct: 475 ALAATLLKNCYDALPAHGKVVLVECILPVNPEATPEVQGVFHVDMIMLAHNPGGRERYER 296
Query: 443 EFRELAKGAGFSGFKATYIYANAWAIEFIK*I 348
EF LAKGAGF+ K TYIYANAWAIEF K*+
Sbjct: 295 EFEALAKGAGFAAMKTTYIYANAWAIEFTK*M 200
Score = 119 bits (255), Expect(2) = 2e-031
Identities = 53/74 (71%), Positives = 56/74 (75%)
Frame = +1 / +3
Query: 415 PAPLASSRNSRSYRSLPPGLCASMIMSTWNTPCALGVASVLTGSTHSTTMTLPFSGSAS* 594
PAPLA + NS SY SLPPGLCASMIMSTWNTPC GVAS TG HST+ TLP +G AS*
Sbjct: 267 PAPLARASNSLSYLSLPPGLCASMIMSTWNTPCTSGVASGFTGRMHSTSTTLPCAGKAS* 446
Query: 595 QFLSSVAQCASLQS 636
QFLSSVA A S
Sbjct: 447 QFLSSVAASARRSS 488
Score = 37.7 bits (76), Expect(2) = 4e-051
Identities = 14/14 (100%), Positives = 14/14 (100%)
Frame = -3 / -3
Query: 657 PHEVDPPRLERRAL 616
PHEVDPPRLERRAL
Sbjct: 511 PHEVDPPRLERRAL 470
Score = 35.9 bits (72), Expect(2) = 2e-031
Identities = 12/14 (85%), Positives = 14/14 (100%)
Frame = +1 / +2
Query: 616 QCASLQSWRIHFMR 657
+C+SLQSWRIHFMR
Sbjct: 470 KCSSLQSWRIHFMR 511
>gb|BM443031.2|BM443031 EBro02_SQ002_E04_R root, 3 week, hydroponic grown, low nitrogen, cv
Optic, EBro02 Hordeum vulgare subsp. vulgare cDNA clone
EBro02_SQ002_E04 5', mRNA sequence
Length = 560
Score = 198 bits (427), Expect = 2e-050
Identities = 77/95 (81%), Positives = 86/95 (90%)
Frame = -1 / +2
Query: 632 WSDAHCATLLKNCYDALPENGKVIVVECVLPVNTEATPKAQGVFHVDMIMLAHNPGGKER 453
WSD HCATLLKNCYDALP +GKV++VEC+LPVN EATPKAQGVF++DMIMLAHNPGG+ER
Sbjct: 2 WSDEHCATLLKNCYDALPAHGKVVLVECILPVNPEATPKAQGVFNLDMIMLAHNPGGRER 181
Query: 452 YEREFRELAKGAGFSGFKATYIYANAWAIEFIK*I 348
YEREF LAKGAGF+ KATYIYANAWAIE K*+
Sbjct: 182 YEREFEALAKGAGFASIKATYIYANAWAIELTK*M 286
Score = 128 bits (275), Expect = 2e-029
Identities = 57/73 (78%), Positives = 61/73 (83%)
Frame = +1 / -3
Query: 415 PAPLASSRNSRSYRSLPPGLCASMIMSTWNTPCALGVASVLTGSTHSTTMTLPFSGSAS* 594
PAPLA + NS SY SLPPGLCASMIMS NTPCALGVAS LTG HST+ TLP +GSAS*
Sbjct: 219 PAPLARASNSLSYLSLPPGLCASMIMSRLNTPCALGVASGLTGRMHSTSTTLPCAGSAS* 40
Query: 595 QFLSSVAQCASLQ 633
QF SSVAQC+SLQ
Sbjct: 39 QFFSSVAQCSSLQ 1
>gb|BF257679.2|BF257679 HVSMEf0013I17f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEf0013I17f, mRNA sequence
Length = 524
Score = 196 bits (422), Expect = 1e-049
Identities = 75/93 (80%), Positives = 85/93 (91%)
Frame = -1 / +2
Query: 674 PAGDAILMKWILHDWSDAHCATLLKNCYDALPENGKVIVVECVLPVNTEATPKAQGVFHV 495
P GDAILMKWILHDWSD HCATLLKNCYDALP +GKV++VEC+LPVN EATPKAQGVF++
Sbjct: 245 P*GDAILMKWILHDWSDEHCATLLKNCYDALPAHGKVVLVECILPVNPEATPKAQGVFNL 424
Query: 494 DMIMLAHNPGGKERYEREFRELAKGAGFSGFKA 396
DMIML+HNPGG+ERYEREF+ LAKG GF+ KA
Sbjct: 425 DMIMLSHNPGGRERYEREFKALAKGGGFAFIKA 523
Score = 148 bits (318), Expect = 3e-035
Identities = 66/85 (77%), Positives = 70/85 (82%)
Frame = +1 / -3
Query: 415 PAPLASSRNSRSYRSLPPGLCASMIMSTWNTPCALGVASVLTGSTHSTTMTLPFSGSAS* 594
P P A + NS SY SLPPGLC SMIMS NTPCALGVAS LTGS HST+ TLP +GSAS*
Sbjct: 504 PPPFARALNSLSYLSLPPGLCESMIMSRLNTPCALGVASGLTGSMHSTSTTLPCAGSAS* 325
Query: 595 QFLSSVAQCASLQSWRIHFMRMASP 669
QF SSVAQC+SLQS RIHFMRMASP
Sbjct: 324 QFFSSVAQCSSLQS*RIHFMRMASP 250
>gb|CK122964.1|CK122964 BES1824101i06 BES1824 Hordeum vulgare subsp. vulgare cDNA clone
MPMGp2010I061 5-PRIME, mRNA sequence
Length = 507
Score = 192 bits (414), Expect = 2e-048
Identities = 79/100 (79%), Positives = 86/100 (86%)
Frame = -1 / +1
Query: 620 HCATLLKNCYDALPENGKVIVVECVLPVNTEATPKAQGVFHVDMIMLAHNPGGKERYERE 441
HCATLLKNCYDALP +GKV++VEC+LPVN EATPKAQGVFHVDMIMLAHNPGG+ERYERE
Sbjct: 1 HCATLLKNCYDALPAHGKVVLVECILPVNPEATPKAQGVFHVDMIMLAHNPGGRERYERE 180
Query: 440 FRELAKGAGFSGFKATYIYANAWAIEFIK*IRLPPSPR*D 321
F LAKGAGF+ K TYIYANA+AIEF K*I P *D
Sbjct: 181 FEALAKGAGFAAMKTTYIYANAFAIEFTK*IHGNRPPI*D 300
Score = 129 bits (276), Expect = 2e-029
Identities = 56/69 (81%), Positives = 59/69 (85%)
Frame = +1 / -2
Query: 412 KPAPLASSRNSRSYRSLPPGLCASMIMSTWNTPCALGVASVLTGSTHSTTMTLPFSGSAS 591
KPAPLA + NS SY SLPPGLCASMIMSTWNTPCALGVAS TG HST+ TLP +GSAS
Sbjct: 209 KPAPLARASNSLSYLSLPPGLCASMIMSTWNTPCALGVASGFTGRMHSTSTTLPCAGSAS 30
Query: 592 *QFLSSVAQ 618
*QFLSSVAQ
Sbjct: 29 *QFLSSVAQ 3
>gb|BQ661260.1|BQ661260 HM02K23u HM Hordeum vulgare subsp. vulgare cDNA clone HM02K23
3-PRIME, mRNA sequence
Length = 483
Score = 191 bits (411), Expect = 4e-048
Identities = 78/100 (78%), Positives = 86/100 (86%)
Frame = -1 / -3
Query: 620 HCATLLKNCYDALPENGKVIVVECVLPVNTEATPKAQGVFHVDMIMLAHNPGGKERYERE 441
HCATLLKNCYDALP +GKV++VEC+LPVN EATPKAQGVFHVDMIMLAHNPGG+ERY+RE
Sbjct: 478 HCATLLKNCYDALPAHGKVVLVECILPVNPEATPKAQGVFHVDMIMLAHNPGGRERYQRE 299
Query: 440 FRELAKGAGFSGFKATYIYANAWAIEFIK*IRLPPSPR*D 321
F LAKGAGF+ K TYIYANA+AIEF K*I P *D
Sbjct: 298 FEALAKGAGFAAMKTTYIYANAFAIEFTK*IHGNRPPI*D 179
Score = 130 bits (279), Expect = 6e-030
Identities = 56/71 (78%), Positives = 60/71 (84%)
Frame = +1 / +3
Query: 412 KPAPLASSRNSRSYRSLPPGLCASMIMSTWNTPCALGVASVLTGSTHSTTMTLPFSGSAS 591
KPAPLA + NS Y SLPPGLCASMIMSTWNTPCALGVAS TG HST+ TLP +GSAS
Sbjct: 270 KPAPLARASNSLWYLSLPPGLCASMIMSTWNTPCALGVASGFTGRMHSTSTTLPCAGSAS 449
Query: 592 *QFLSSVAQCA 624
*QFLSSVAQC+
Sbjct: 450 *QFLSSVAQCS 482
>gb|BU997286.1|BU997286 HI07I07r HI Hordeum vulgare subsp. vulgare cDNA clone HI07I07
5-PRIME, mRNA sequence
Length = 474
Score = 188 bits (406), Expect = 2e-047
Identities = 78/99 (78%), Positives = 85/99 (85%)
Frame = -1 / +3
Query: 617 CATLLKNCYDALPENGKVIVVECVLPVNTEATPKAQGVFHVDMIMLAHNPGGKERYEREF 438
CATLLKNCYDALP +GKV++VEC+LPVN EATPKAQGVFHVDMIMLAHNPGG+ERYEREF
Sbjct: 3 CATLLKNCYDALPAHGKVVLVECILPVNPEATPKAQGVFHVDMIMLAHNPGGRERYEREF 182
Query: 437 RELAKGAGFSGFKATYIYANAWAIEFIK*IRLPPSPR*D 321
LAKGAGF+ K TYIYANA+AIEF K*I P *D
Sbjct: 183 EALAKGAGFAAMKTTYIYANAFAIEFTK*IHGNRPPI*D 299
Score = 129 bits (276), Expect = 2e-029
Identities = 56/69 (81%), Positives = 59/69 (85%)
Frame = +1 / -3
Query: 412 KPAPLASSRNSRSYRSLPPGLCASMIMSTWNTPCALGVASVLTGSTHSTTMTLPFSGSAS 591
KPAPLA + NS SY SLPPGLCASMIMSTWNTPCALGVAS TG HST+ TLP +GSAS
Sbjct: 208 KPAPLARASNSLSYLSLPPGLCASMIMSTWNTPCALGVASGFTGRMHSTSTTLPCAGSAS 29
Query: 592 *QFLSSVAQ 618
*QFLSSVAQ
Sbjct: 28 *QFLSSVAQ 2
>gb|BF257029.2|BF257029 HVSMEf0011K17f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEf0011K17f, mRNA sequence
Length = 582
Score = 179 bits (386), Expect = 1e-044
Identities = 70/97 (72%), Positives = 82/97 (84%)
Frame = -1 / +3
Query: 674 PAGDAILMKWILHDWSDAHCATLLKNCYDALPENGKVIVVECVLPVNTEATPKAQGVFHV 495
P+GDAILMKWILHDWSD HCATLLKNCYDALP +GKV++VEC+LPVN ATPKAQGVF++
Sbjct: 288 PSGDAILMKWILHDWSDEHCATLLKNCYDALPAHGKVVLVECILPVNP*ATPKAQGVFNL 467
Query: 494 DMIMLAHNPGGKERYEREFRELAKGAGFSGFKATYIY 384
DMIMLAHN GG+ERYE+EF+ +G F + T IY
Sbjct: 468 DMIMLAHNQGGRERYEKEFQGPGQGPRFRLHQGTNIY 578
Score = 134 bits (288), Expect = 4e-031
Identities = 61/77 (79%), Positives = 64/77 (83%)
Frame = +1 / -3
Query: 439 NSRSYRSLPPGLCASMIMSTWNTPCALGVASVLTGSTHSTTMTLPFSGSAS*QFLSSVAQ 618
NS SY SLPP LCASMIMS NTPCALGVA LTG HST+ TLP +GSAS*QF SSVAQ
Sbjct: 523 NSFSYLSLPPWLCASMIMSRLNTPCALGVAYGLTGRMHSTSTTLPCAGSAS*QFFSSVAQ 344
Query: 619 CASLQSWRIHFMRMASP 669
C+SLQS RIHFMRMASP
Sbjct: 343 CSSLQS*RIHFMRMASP 293
>gb|AV917656.1|AV917656 AV917656 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags10o13 3', mRNA sequence
Length = 700
Score = 178 bits (383), Expect = 3e-044
Identities = 67/111 (60%), Positives = 85/111 (76%)
Frame = -1 / -1
Query: 674 PAGDAILMKWILHDWSDAHCATLLKNCYDALPENGKVIVVECVLPVNTEATPKAQGVFHV 495
P+GDAI++KW+LH+W+D HC TLL+NCYDALP +GKV +VE +LP+ +AT + Q
Sbjct: 442 PSGDAIILKWMLHNWTDEHCTTLLRNCYDALPPHGKVFIVENILPLKPDATSRGQQTSLS 263
Query: 494 DMIMLAHNPGGKERYEREFRELAKGAGFSGFKATYIYANAWAIEFIK*IRL 342
DMIML H P G+ER +REF+EL K AGF+GFK TYIY N+W IE *IRL
Sbjct: 262 DMIMLMHTPAGRERSQREFQELGKAAGFTGFKTTYIYGNSWVIELTT*IRL 110
Score = 101 bits (215), Expect = 4e-021
Identities = 50/88 (56%), Positives = 56/88 (63%)
Frame = +1 / +3
Query: 406 PEKPAPLASSRNSRSYRSLPPGLCASMIMSTWNTPCALGVASVLTGSTHSTTMTLPFSGS 585
P PA L SS NS SLP G+C SMIMS + L VAS L+G ST TLP G+
Sbjct: 174 PVNPAALPSSWNSLWLLSLPAGVCMSMIMSLRDVCWPLDVASGLSGRMFSTMKTLPCGGN 353
Query: 586 AS*QFLSSVAQCASLQSWRIHFMRMASP 669
AS*QFLS V QC+S+Q W IHF MASP
Sbjct: 354 AS*QFLSRVVQCSSVQLWSIHFKMMASP 437
>gb|AV918498.1|AV918498 AV918498 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags21e05 3', mRNA sequence
Length = 585
Score = 178 bits (383), Expect = 3e-044
Identities = 67/111 (60%), Positives = 85/111 (76%)
Frame = -1 / -3
Query: 674 PAGDAILMKWILHDWSDAHCATLLKNCYDALPENGKVIVVECVLPVNTEATPKAQGVFHV 495
P+GDAI++KW+LH+W+D HC TLL+NCYDALP +GKV +VE +LP+ +AT + Q
Sbjct: 442 PSGDAIILKWMLHNWTDEHCTTLLRNCYDALPPHGKVFIVENILPLKPDATSRGQQTSLS 263
Query: 494 DMIMLAHNPGGKERYEREFRELAKGAGFSGFKATYIYANAWAIEFIK*IRL 342
DMIML H P G+ER +REF+EL K AGF+GFK TYIY N+W IE *IRL
Sbjct: 262 DMIMLMHTPAGRERSQREFQELGKAAGFTGFKTTYIYGNSWVIELTT*IRL 110
Score = 101 bits (215), Expect = 4e-021
Identities = 50/88 (56%), Positives = 56/88 (63%)
Frame = +1 / +3
Query: 406 PEKPAPLASSRNSRSYRSLPPGLCASMIMSTWNTPCALGVASVLTGSTHSTTMTLPFSGS 585
P PA L SS NS SLP G+C SMIMS + L VAS L+G ST TLP G+
Sbjct: 174 PVNPAALPSSWNSLWLLSLPAGVCMSMIMSLRDVCWPLDVASGLSGRMFSTMKTLPCGGN 353
Query: 586 AS*QFLSSVAQCASLQSWRIHFMRMASP 669
AS*QFLS V QC+S+Q W IHF MASP
Sbjct: 354 AS*QFLSRVVQCSSVQLWSIHFKMMASP 437
>gb|AV920163.1|AV920163 AV920163 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags9i11 3', mRNA sequence
Length = 749
Score = 178 bits (383), Expect = 3e-044
Identities = 67/111 (60%), Positives = 85/111 (76%)
Frame = -1 / -2
Query: 674 PAGDAILMKWILHDWSDAHCATLLKNCYDALPENGKVIVVECVLPVNTEATPKAQGVFHV 495
P+GDAI++KW+LH+W+D HC TLL+NCYDALP +GKV +VE +LP+ +AT + Q
Sbjct: 442 PSGDAIILKWMLHNWTDEHCTTLLRNCYDALPPHGKVFIVENILPLKPDATSRGQQTSLS 263
Query: 494 DMIMLAHNPGGKERYEREFRELAKGAGFSGFKATYIYANAWAIEFIK*IRL 342
DMIML H P G+ER +REF+EL K AGF+GFK TYIY N+W IE *IRL
Sbjct: 262 DMIMLMHTPAGRERSQREFQELGKAAGFTGFKTTYIYGNSWVIELTT*IRL 110
Score = 101 bits (215), Expect = 4e-021
Identities = 50/88 (56%), Positives = 56/88 (63%)
Frame = +1 / +3
Query: 406 PEKPAPLASSRNSRSYRSLPPGLCASMIMSTWNTPCALGVASVLTGSTHSTTMTLPFSGS 585
P PA L SS NS SLP G+C SMIMS + L VAS L+G ST TLP G+
Sbjct: 174 PVNPAALPSSWNSLWLLSLPAGVCMSMIMSLRDVCWPLDVASGLSGRMFSTMKTLPCGGN 353
Query: 586 AS*QFLSSVAQCASLQSWRIHFMRMASP 669
AS*QFLS V QC+S+Q W IHF MASP
Sbjct: 354 AS*QFLSRVVQCSSVQLWSIHFKMMASP 437
>gb|AV921873.1|AV921873 AV921873 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags13m21 3', mRNA sequence
Length = 584
Score = 178 bits (383), Expect = 3e-044
Identities = 67/111 (60%), Positives = 85/111 (76%)
Frame = -1 / -3
Query: 674 PAGDAILMKWILHDWSDAHCATLLKNCYDALPENGKVIVVECVLPVNTEATPKAQGVFHV 495
P+GDAI++KW+LH+W+D HC TLL+NCYDALP +GKV +VE +LP+ +AT + Q
Sbjct: 441 PSGDAIILKWMLHNWTDEHCTTLLRNCYDALPPHGKVFIVENILPLKPDATSRGQQTSLS 262
Query: 494 DMIMLAHNPGGKERYEREFRELAKGAGFSGFKATYIYANAWAIEFIK*IRL 342
DMIML H P G+ER +REF+EL K AGF+GFK TYIY N+W IE *IRL
Sbjct: 261 DMIMLMHTPAGRERSQREFQELGKAAGFTGFKTTYIYGNSWVIELTT*IRL 109
Score = 101 bits (215), Expect = 4e-021
Identities = 50/88 (56%), Positives = 56/88 (63%)
Frame = +1 / +2
Query: 406 PEKPAPLASSRNSRSYRSLPPGLCASMIMSTWNTPCALGVASVLTGSTHSTTMTLPFSGS 585
P PA L SS NS SLP G+C SMIMS + L VAS L+G ST TLP G+
Sbjct: 173 PVNPAALPSSWNSLWLLSLPAGVCMSMIMSLRDVCWPLDVASGLSGRMFSTMKTLPCGGN 352
Query: 586 AS*QFLSSVAQCASLQSWRIHFMRMASP 669
AS*QFLS V QC+S+Q W IHF MASP
Sbjct: 353 AS*QFLSRVVQCSSVQLWSIHFKMMASP 436
>gb|AV930818.1|AV930818 AV930818 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp.
vulgare cDNA clone basd25f17 3', mRNA sequence
Length = 680
Score = 178 bits (383), Expect = 3e-044
Identities = 67/111 (60%), Positives = 85/111 (76%)
Frame = -1 / -2
Query: 674 PAGDAILMKWILHDWSDAHCATLLKNCYDALPENGKVIVVECVLPVNTEATPKAQGVFHV 495
P+GDAI++KW+LH+W+D HC TLL+NCYDALP +GKV +VE +LP+ +AT + Q
Sbjct: 433 PSGDAIILKWMLHNWTDEHCTTLLRNCYDALPPHGKVFIVENILPLKPDATSRGQQTSLS 254
Query: 494 DMIMLAHNPGGKERYEREFRELAKGAGFSGFKATYIYANAWAIEFIK*IRL 342
DMIML H P G+ER +REF+EL K AGF+GFK TYIY N+W IE *IRL
Sbjct: 253 DMIMLMHTPAGRERSQREFQELGKAAGFTGFKTTYIYGNSWVIELTT*IRL 101
Score = 101 bits (215), Expect = 4e-021
Identities = 50/88 (56%), Positives = 56/88 (63%)
Frame = +1 / +3
Query: 406 PEKPAPLASSRNSRSYRSLPPGLCASMIMSTWNTPCALGVASVLTGSTHSTTMTLPFSGS 585
P PA L SS NS SLP G+C SMIMS + L VAS L+G ST TLP G+
Sbjct: 165 PVNPAALPSSWNSLWLLSLPAGVCMSMIMSLRDVCWPLDVASGLSGRMFSTMKTLPCGGN 344
Query: 586 AS*QFLSSVAQCASLQSWRIHFMRMASP 669
AS*QFLS V QC+S+Q W IHF MASP
Sbjct: 345 AS*QFLSRVVQCSSVQLWSIHFKMMASP 428
>gb|BJ466353.1|BJ466353 BJ466353 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags31l22 3', mRNA sequence
Length = 665
Score = 178 bits (383), Expect = 3e-044
Identities = 67/111 (60%), Positives = 85/111 (76%)
Frame = -1 / -2
Query: 674 PAGDAILMKWILHDWSDAHCATLLKNCYDALPENGKVIVVECVLPVNTEATPKAQGVFHV 495
P+GDAI++KW+LH+W+D HC TLL+NCYDALP +GKV +VE +LP+ +AT + Q
Sbjct: 406 PSGDAIILKWMLHNWTDEHCTTLLRNCYDALPPHGKVFIVENILPLKPDATSRGQQTSLS 227
Query: 494 DMIMLAHNPGGKERYEREFRELAKGAGFSGFKATYIYANAWAIEFIK*IRL 342
DMIML H P G+ER +REF+EL K AGF+GFK TYIY N+W IE *IRL
Sbjct: 226 DMIMLMHTPAGRERSQREFQELGKAAGFTGFKTTYIYGNSWVIELTT*IRL 74
Score = 101 bits (215), Expect = 4e-021
Identities = 50/88 (56%), Positives = 56/88 (63%)
Frame = +1 / +3
Query: 406 PEKPAPLASSRNSRSYRSLPPGLCASMIMSTWNTPCALGVASVLTGSTHSTTMTLPFSGS 585
P PA L SS NS SLP G+C SMIMS + L VAS L+G ST TLP G+
Sbjct: 138 PVNPAALPSSWNSLWLLSLPAGVCMSMIMSLRDVCWPLDVASGLSGRMFSTMKTLPCGGN 317
Query: 586 AS*QFLSSVAQCASLQSWRIHFMRMASP 669
AS*QFLS V QC+S+Q W IHF MASP
Sbjct: 318 AS*QFLSRVVQCSSVQLWSIHFKMMASP 401
>gb|BJ466470.1|BJ466470 BJ466470 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags32e16 3', mRNA sequence
Length = 466
Score = 178 bits (383), Expect = 3e-044
Identities = 67/111 (60%), Positives = 85/111 (76%)
Frame = -1 / -1
Query: 674 PAGDAILMKWILHDWSDAHCATLLKNCYDALPENGKVIVVECVLPVNTEATPKAQGVFHV 495
P+GDAI++KW+LH+W+D HC TLL+NCYDALP +GKV +VE +LP+ +AT + Q
Sbjct: 391 PSGDAIILKWMLHNWTDEHCTTLLRNCYDALPPHGKVFIVENILPLKPDATSRGQQTSLS 212
Query: 494 DMIMLAHNPGGKERYEREFRELAKGAGFSGFKATYIYANAWAIEFIK*IRL 342
DMIML H P G+ER +REF+EL K AGF+GFK TYIY N+W IE *IRL
Sbjct: 211 DMIMLMHTPAGRERSQREFQELGKAAGFTGFKTTYIYGNSWVIELTT*IRL 59
Score = 101 bits (215), Expect = 4e-021
Identities = 50/88 (56%), Positives = 56/88 (63%)
Frame = +1 / +3
Query: 406 PEKPAPLASSRNSRSYRSLPPGLCASMIMSTWNTPCALGVASVLTGSTHSTTMTLPFSGS 585
P PA L SS NS SLP G+C SMIMS + L VAS L+G ST TLP G+
Sbjct: 123 PVNPAALPSSWNSLWLLSLPAGVCMSMIMSLRDVCWPLDVASGLSGRMFSTMKTLPCGGN 302
Query: 586 AS*QFLSSVAQCASLQSWRIHFMRMASP 669
AS*QFLS V QC+S+Q W IHF MASP
Sbjct: 303 AS*QFLSRVVQCSSVQLWSIHFKMMASP 386
>gb|BJ466471.1|BJ466471 BJ466471 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags32e17 3', mRNA sequence
Length = 693
Score = 178 bits (383), Expect = 3e-044
Identities = 67/111 (60%), Positives = 85/111 (76%)
Frame = -1 / -3
Query: 674 PAGDAILMKWILHDWSDAHCATLLKNCYDALPENGKVIVVECVLPVNTEATPKAQGVFHV 495
P+GDAI++KW+LH+W+D HC TLL+NCYDALP +GKV +VE +LP+ +AT + Q
Sbjct: 409 PSGDAIILKWMLHNWTDEHCTTLLRNCYDALPPHGKVFIVENILPLKPDATSRGQQTSLS 230
Query: 494 DMIMLAHNPGGKERYEREFRELAKGAGFSGFKATYIYANAWAIEFIK*IRL 342
DMIML H P G+ER +REF+EL K AGF+GFK TYIY N+W IE *IRL
Sbjct: 229 DMIMLMHTPAGRERSQREFQELGKAAGFTGFKTTYIYGNSWVIELTT*IRL 77
Score = 101 bits (215), Expect = 4e-021
Identities = 50/88 (56%), Positives = 56/88 (63%)
Frame = +1 / +3
Query: 406 PEKPAPLASSRNSRSYRSLPPGLCASMIMSTWNTPCALGVASVLTGSTHSTTMTLPFSGS 585
P PA L SS NS SLP G+C SMIMS + L VAS L+G ST TLP G+
Sbjct: 141 PVNPAALPSSWNSLWLLSLPAGVCMSMIMSLRDVCWPLDVASGLSGRMFSTMKTLPCGGN 320
Query: 586 AS*QFLSSVAQCASLQSWRIHFMRMASP 669
AS*QFLS V QC+S+Q W IHF MASP
Sbjct: 321 AS*QFLSRVVQCSSVQLWSIHFKMMASP 404
>gb|BJ466778.1|BJ466778 BJ466778 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags33n24 3', mRNA sequence
Length = 666
Score = 178 bits (383), Expect = 3e-044
Identities = 67/111 (60%), Positives = 85/111 (76%)
Frame = -1 / -3
Query: 674 PAGDAILMKWILHDWSDAHCATLLKNCYDALPENGKVIVVECVLPVNTEATPKAQGVFHV 495
P+GDAI++KW+LH+W+D HC TLL+NCYDALP +GKV +VE +LP+ +AT + Q
Sbjct: 436 PSGDAIILKWMLHNWTDEHCTTLLRNCYDALPPHGKVFIVENILPLKPDATSRGQQTSLS 257
Query: 494 DMIMLAHNPGGKERYEREFRELAKGAGFSGFKATYIYANAWAIEFIK*IRL 342
DMIML H P G+ER +REF+EL K AGF+GFK TYIY N+W IE *IRL
Sbjct: 256 DMIMLMHTPAGRERSQREFQELGKAAGFTGFKTTYIYGNSWVIELTT*IRL 104
Score = 101 bits (215), Expect = 4e-021
Identities = 50/88 (56%), Positives = 56/88 (63%)
Frame = +1 / +3
Query: 406 PEKPAPLASSRNSRSYRSLPPGLCASMIMSTWNTPCALGVASVLTGSTHSTTMTLPFSGS 585
P PA L SS NS SLP G+C SMIMS + L VAS L+G ST TLP G+
Sbjct: 168 PVNPAALPSSWNSLWLLSLPAGVCMSMIMSLRDVCWPLDVASGLSGRMFSTMKTLPCGGN 347
Query: 586 AS*QFLSSVAQCASLQSWRIHFMRMASP 669
AS*QFLS V QC+S+Q W IHF MASP
Sbjct: 348 AS*QFLSRVVQCSSVQLWSIHFKMMASP 431
>gb|BJ468102.1|BJ468102 BJ468102 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags37b21 3', mRNA sequence
Length = 658
Score = 178 bits (383), Expect = 3e-044
Identities = 67/111 (60%), Positives = 85/111 (76%)
Frame = -1 / -1
Query: 674 PAGDAILMKWILHDWSDAHCATLLKNCYDALPENGKVIVVECVLPVNTEATPKAQGVFHV 495
P+GDAI++KW+LH+W+D HC TLL+NCYDALP +GKV +VE +LP+ +AT + Q
Sbjct: 442 PSGDAIILKWMLHNWTDEHCTTLLRNCYDALPPHGKVFIVENILPLKPDATSRGQQTSLS 263
Query: 494 DMIMLAHNPGGKERYEREFRELAKGAGFSGFKATYIYANAWAIEFIK*IRL 342
DMIML H P G+ER +REF+EL K AGF+GFK TYIY N+W IE *IRL
Sbjct: 262 DMIMLMHTPAGRERSQREFQELGKAAGFTGFKTTYIYGNSWVIELTT*IRL 110
Score = 101 bits (215), Expect = 4e-021
Identities = 50/88 (56%), Positives = 56/88 (63%)
Frame = +1 / +3
Query: 406 PEKPAPLASSRNSRSYRSLPPGLCASMIMSTWNTPCALGVASVLTGSTHSTTMTLPFSGS 585
P PA L SS NS SLP G+C SMIMS + L VAS L+G ST TLP G+
Sbjct: 174 PVNPAALPSSWNSLWLLSLPAGVCMSMIMSLRDVCWPLDVASGLSGRMFSTMKTLPCGGN 353
Query: 586 AS*QFLSSVAQCASLQSWRIHFMRMASP 669
AS*QFLS V QC+S+Q W IHF MASP
Sbjct: 354 AS*QFLSRVVQCSSVQLWSIHFKMMASP 437
>gb|BQ657250.1|BQ657250 HA09B21u HA Hordeum vulgare subsp. vulgare cDNA clone HA09B21
3-PRIME, mRNA sequence
Length = 497
Score = 178 bits (383), Expect = 3e-044
Identities = 67/111 (60%), Positives = 85/111 (76%)
Frame = -1 / -2
Query: 674 PAGDAILMKWILHDWSDAHCATLLKNCYDALPENGKVIVVECVLPVNTEATPKAQGVFHV 495
P+GDAI++KW+LH+W+D HC TLL+NCYDALP +GKV +VE +LP+ +AT + Q
Sbjct: 451 PSGDAIILKWMLHNWTDEHCTTLLRNCYDALPPHGKVFIVENILPLKPDATSRGQQTSLS 272
Query: 494 DMIMLAHNPGGKERYEREFRELAKGAGFSGFKATYIYANAWAIEFIK*IRL 342
DMIML H P G+ER +REF+EL K AGF+GFK TYIY N+W IE *IRL
Sbjct: 271 DMIMLMHTPAGRERSQREFQELGKAAGFTGFKTTYIYGNSWVIELTT*IRL 119
Score = 101 bits (215), Expect = 4e-021
Identities = 50/88 (56%), Positives = 56/88 (63%)
Frame = +1 / +3
Query: 406 PEKPAPLASSRNSRSYRSLPPGLCASMIMSTWNTPCALGVASVLTGSTHSTTMTLPFSGS 585
P PA L SS NS SLP G+C SMIMS + L VAS L+G ST TLP G+
Sbjct: 183 PVNPAALPSSWNSLWLLSLPAGVCMSMIMSLRDVCWPLDVASGLSGRMFSTMKTLPCGGN 362
Query: 586 AS*QFLSSVAQCASLQSWRIHFMRMASP 669
AS*QFLS V QC+S+Q W IHF MASP
Sbjct: 363 AS*QFLSRVVQCSSVQLWSIHFKMMASP 446
>gb|BQ756546.1|BQ756546 EBem09_SQ003_A13_R embryo, 1 Day germination, no treatment, cv
Optic, EBem09 Hordeum vulgare subsp. vulgare cDNA clone
EBem09_SQ003_A13 5', mRNA sequence
Length = 530
Score = 177 bits (380), Expect = 8e-044
Identities = 71/108 (65%), Positives = 88/108 (81%)
Frame = -1 / +3
Query: 674 PAGDAILMKWILHDWSDAHCATLLKNCYDALPENGKVIVVECVLPVNTEATPKAQGVFHV 495
P GDAILMKWIL+ +SD CA LLKNCYDALP +GKVI VEC+LPVN +AT AQG+ V
Sbjct: 99 PTGDAILMKWILNCFSDDECAILLKNCYDALPAHGKVINVECILPVNPDATNSAQGLISV 278
Query: 494 DMIMLAHNPGGKERYEREFRELAKGAGFSGFKATYIYANAWAIEFIK* 351
D+ +LA++PGGKERY R+ +LA+ AGF+G KATYIYA+ WA+E+ K*
Sbjct: 279 DVSLLAYSPGGKERYLRDLEKLARAAGFTGVKATYIYADFWAMEYTK* 422
Score = 115 bits (245), Expect = 3e-025
Identities = 55/88 (62%), Positives = 61/88 (69%)
Frame = +1 / -2
Query: 406 PEKPAPLASSRNSRSYRSLPPGLCASMIMSTWNTPCALGVASVLTGSTHSTTMTLPFSGS 585
P PA LAS S Y SLPPGL AS + ST PCAL VAS TG HST +TLP +GS
Sbjct: 367 PVNPAALASFSRSLRYLSLPPGLYASRLTSTLINPCALFVASGFTGRIHSTLITLPCAGS 188
Query: 586 AS*QFLSSVAQCASLQSWRIHFMRMASP 669
AS*QFLS +A +SL+ RIHFMRMASP
Sbjct: 187 AS*QFLSRMAHSSSLKQLRIHFMRMASP 104
>gb|BF260877.2|BF260877 HVSMEf0023C21f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEf0023C21f, mRNA sequence
Length = 752
Score = 175 bits (376), Expect = 3e-043
Identities = 70/108 (64%), Positives = 87/108 (80%)
Frame = -1 / +2
Query: 674 PAGDAILMKWILHDWSDAHCATLLKNCYDALPENGKVIVVECVLPVNTEATPKAQGVFHV 495
P GDAILMKWIL+ +SD CA LLKNCYDALP +GKVI VEC+LPVN +AT QG+ V
Sbjct: 329 PTGDAILMKWILNCFSDDECAILLKNCYDALPAHGKVINVECILPVNPDATNSTQGLISV 508
Query: 494 DMIMLAHNPGGKERYEREFRELAKGAGFSGFKATYIYANAWAIEFIK* 351
D+ +LA++PGGKERY R+ +LA+ AGF+G KATYIYA+ WA+E+ K*
Sbjct: 509 DVSLLAYSPGGKERYLRDLEKLARAAGFTGVKATYIYADFWAMEYTK* 652
Score = 113 bits (241), Expect = 1e-024
Identities = 54/88 (61%), Positives = 60/88 (68%)
Frame = +1 / -3
Query: 406 PEKPAPLASSRNSRSYRSLPPGLCASMIMSTWNTPCALGVASVLTGSTHSTTMTLPFSGS 585
P PA LAS S Y SLPPGL AS + ST PC L VAS TG HST +TLP +GS
Sbjct: 597 PVNPAALASFSRSLRYLSLPPGLYASRLTSTLINPCVLFVASGFTGRIHSTLITLPCAGS 418
Query: 586 AS*QFLSSVAQCASLQSWRIHFMRMASP 669
AS*QFLS +A +SL+ RIHFMRMASP
Sbjct: 417 AS*QFLSRMAHSSSLKQLRIHFMRMASP 334
>gb|BF256678.3|BF256678 HVSMEf0010L01f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEf0010L01f, mRNA sequence
Length = 645
Score = 175 bits (376), Expect = 3e-043
Identities = 70/108 (64%), Positives = 87/108 (80%)
Frame = -1 / +2
Query: 674 PAGDAILMKWILHDWSDAHCATLLKNCYDALPENGKVIVVECVLPVNTEATPKAQGVFHV 495
P GDAILMKWIL+ +SD CA LLKNCYDALP +GKVI VEC+LPVN +AT QG+ V
Sbjct: 134 PTGDAILMKWILNCFSDDECAILLKNCYDALPAHGKVINVECILPVNPDATNSTQGLISV 313
Query: 494 DMIMLAHNPGGKERYEREFRELAKGAGFSGFKATYIYANAWAIEFIK* 351
D+ +LA++PGGKERY R+ +LA+ AGF+G KATYIYA+ WA+E+ K*
Sbjct: 314 DVSLLAYSPGGKERYLRDLEKLARAAGFTGVKATYIYADFWAMEYTK* 457
Score = 113 bits (241), Expect = 1e-024
Identities = 54/88 (61%), Positives = 60/88 (68%)
Frame = +1 / -1
Query: 406 PEKPAPLASSRNSRSYRSLPPGLCASMIMSTWNTPCALGVASVLTGSTHSTTMTLPFSGS 585
P PA LAS S Y SLPPGL AS + ST PC L VAS TG HST +TLP +GS
Sbjct: 402 PVNPAALASFSRSLRYLSLPPGLYASRLTSTLINPCVLFVASGFTGRIHSTLITLPCAGS 223
Query: 586 AS*QFLSSVAQCASLQSWRIHFMRMASP 669
AS*QFLS +A +SL+ RIHFMRMASP
Sbjct: 222 AS*QFLSRMAHSSSLKQLRIHFMRMASP 139
>gb|BQ472105.1|BQ472105 HV04G21r HV Hordeum vulgare subsp. vulgare cDNA clone HV04G21
5-PRIME, mRNA sequence
Length = 607
Score = 175 bits (376), Expect = 3e-043
Identities = 66/111 (59%), Positives = 84/111 (75%)
Frame = -1 / +1
Query: 674 PAGDAILMKWILHDWSDAHCATLLKNCYDALPENGKVIVVECVLPVNTEATPKAQGVFHV 495
P+GDAI++KW+LH+W+D HC TLL+NCYDALP +GKV +VE +LP+ +AT + Q
Sbjct: 229 PSGDAIILKWMLHNWTDEHCTTLLRNCYDALPPHGKVFIVENILPLKPDATSRGQQTSLS 408
Query: 494 DMIMLAHNPGGKERYEREFRELAKGAGFSGFKATYIYANAWAIEFIK*IRL 342
DMIML H P G+ER +REF+EL K AGF+G K TYIY N+W IE *IRL
Sbjct: 409 DMIMLMHTPAGRERSQREFQELGKAAGFTGXKTTYIYGNSWVIELTT*IRL 561
Score = 101 bits (215), Expect = 4e-021
Identities = 50/88 (56%), Positives = 56/88 (63%)
Frame = +1 / -3
Query: 406 PEKPAPLASSRNSRSYRSLPPGLCASMIMSTWNTPCALGVASVLTGSTHSTTMTLPFSGS 585
P PA L SS NS SLP G+C SMIMS + L VAS L+G ST TLP G+
Sbjct: 497 PVNPAALPSSWNSLWLLSLPAGVCMSMIMSLRDVCWPLDVASGLSGRMFSTMKTLPCGGN 318
Query: 586 AS*QFLSSVAQCASLQSWRIHFMRMASP 669
AS*QFLS V QC+S+Q W IHF MASP
Sbjct: 317 AS*QFLSRVVQCSSVQLWSIHFKMMASP 234
>gb|AJ462914.1|AJ462914 AJ462914 S00002 Hordeum vulgare subsp. vulgare cDNA clone
S0000200068B08F1, mRNA sequence
Length = 420
Score = 173 bits (372), Expect = 1e-042
Identities = 71/108 (65%), Positives = 87/108 (80%)
Frame = -1 / +3
Query: 674 PAGDAILMKWILHDWSDAHCATLLKNCYDALPENGKVIVVECVLPVNTEATPKAQGVFHV 495
P+GDAILMKWIL +SD CA LLKNCYDALP +GKVI VEC+LPVN +AT AQG+ V
Sbjct: 9 PSGDAILMKWILPCFSDDECAVLLKNCYDALPAHGKVINVECILPVNPDATNNAQGLICV 188
Query: 494 DMIMLAHNPGGKERYEREFRELAKGAGFSGFKATYIYANAWAIEFIK* 351
D +LA++PGGKER R+F +LAK AGF+G KA+YI+AN WA+E+ K*
Sbjct: 189 DASLLAYSPGGKERNLRDFEKLAKAAGFTGVKASYIFANFWAMEYTK* 332
Score = 112 bits (240), Expect = 2e-024
Identities = 54/88 (61%), Positives = 60/88 (68%)
Frame = +1 / -3
Query: 406 PEKPAPLASSRNSRSYRSLPPGLCASMIMSTWNTPCALGVASVLTGSTHSTTMTLPFSGS 585
P PA LAS S + SLPPGL AS + ST PCAL VAS TG HST +TLP +GS
Sbjct: 277 PVNPAALASFSKSLRFLSLPPGLYASKLASTQINPCALFVASGFTGRIHSTLITLPCAGS 98
Query: 586 AS*QFLSSVAQCASLQSWRIHFMRMASP 669
AS*QFL S A +SL+ RIHFMRMASP
Sbjct: 97 AS*QFLRSTAHSSSLKQGRIHFMRMASP 14
>gb|AL501895.1|AL501895 AL501895 Hordeum vulgare Barke roots Hordeum vulgare subsp. vulgare
cDNA clone HW05L23u 3', mRNA sequence
Length = 572
Score = 172 bits (370), Expect = 2e-042
Identities = 69/87 (79%), Positives = 78/87 (89%)
Frame = -1 / -1
Query: 608 LLKNCYDALPENGKVIVVECVLPVNTEATPKAQGVFHVDMIMLAHNPGGKERYEREFREL 429
LLKN YDALP +GKV++VEC+LPVN EATPKAQGVF++DMIMLAHNPGG+ERYEREF L
Sbjct: 476 LLKNXYDALPAHGKVVLVECILPVNPEATPKAQGVFNLDMIMLAHNPGGRERYEREFEAL 297
Query: 428 AKGAGFSGFKATYIYANAWAIEFIK*I 348
AKGAGF+ KATYIYANAWAIE K*+
Sbjct: 296 AKGAGFASIKATYIYANAWAIELTK*M 216
Score = 108 bits (230), Expect = 4e-023
Identities = 48/64 (75%), Positives = 51/64 (79%)
Frame = +1 / +1
Query: 415 PAPLASSRNSRSYRSLPPGLCASMIMSTWNTPCALGVASVLTGSTHSTTMTLPFSGSAS* 594
PAPLA + NS SY SLPPGLCASMIMS NTPCALGVAS LTG HST+ TLP +GSAS
Sbjct: 283 PAPLARASNSLSYLSLPPGLCASMIMSRLNTPCALGVASGLTGRMHSTSTTLPCAGSASX 462
Query: 595 QFLS 606
QF S
Sbjct: 463 QFFS 474
>gb|BF255126.2|BF255126 HVSMEf0006A10f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEf0006A10f, mRNA sequence
Length = 608
Score = 170 bits (366), Expect = 6e-042
Identities = 70/108 (64%), Positives = 86/108 (79%)
Frame = -1 / +3
Query: 674 PAGDAILMKWILHDWSDAHCATLLKNCYDALPENGKVIVVECVLPVNTEATPKAQGVFHV 495
P+GDAILMKWIL +SD CA LLKNCYDALP +GKVI VEC+LPVN +AT AQG+ V
Sbjct: 261 PSGDAILMKWILPCFSDDECAVLLKNCYDALPAHGKVINVECILPVNPDATNNAQGLICV 440
Query: 494 DMIMLAHNPGGKERYEREFRELAKGAGFSGFKATYIYANAWAIEFIK* 351
D +LA++PGGKER +F +LAK AGF+G KA+YI+AN WA+E+ K*
Sbjct: 441 DASLLAYSPGGKERNLXDFEKLAKAAGFTGVKASYIFANFWAMEYTK* 584
Score = 113 bits (241), Expect = 1e-024
Identities = 54/88 (61%), Positives = 60/88 (68%)
Frame = +1 / -2
Query: 406 PEKPAPLASSRNSRSYRSLPPGLCASMIMSTWNTPCALGVASVLTGSTHSTTMTLPFSGS 585
P PA LAS S + SLPPGL AS + ST PCAL VAS TG HST +TLP +GS
Sbjct: 529 PVNPAALASFSKSXRFLSLPPGLYASKLASTQINPCALFVASGFTGRIHSTLITLPCAGS 350
Query: 586 AS*QFLSSVAQCASLQSWRIHFMRMASP 669
AS*QFL S A +SL+ RIHFMRMASP
Sbjct: 349 AS*QFLRSTAHSSSLKQGRIHFMRMASP 266
>gb|AJ462915.1|AJ462915 AJ462915 S00002 Hordeum vulgare subsp. vulgare cDNA clone
S0000200077C08F1, mRNA sequence
Length = 360
Score = 167 bits (359), Expect = 6e-041
Identities = 68/103 (66%), Positives = 83/103 (80%)
Frame = -1 / +2
Query: 674 PAGDAILMKWILHDWSDAHCATLLKNCYDALPENGKVIVVECVLPVNTEATPKAQGVFHV 495
P+GDAILMKWIL +SD CA LLKNCYDALP +GKVI VEC+LPVN +AT AQG+ V
Sbjct: 50 PSGDAILMKWILPCFSDDECAVLLKNCYDALPAHGKVINVECILPVNPDATNNAQGLICV 229
Query: 494 DMIMLAHNPGGKERYEREFRELAKGAGFSGFKATYIYANAWAI 366
D +LA++PGGKER R+F +LAK AGF+G KA+YI+AN WA+
Sbjct: 230 DASLLAYSPGGKERNLRDFEKLAKAAGFTGVKASYIFANFWAM 358
Score = 112 bits (240), Expect = 2e-024
Identities = 54/88 (61%), Positives = 60/88 (68%)
Frame = +1 / -1
Query: 406 PEKPAPLASSRNSRSYRSLPPGLCASMIMSTWNTPCALGVASVLTGSTHSTTMTLPFSGS 585
P PA LAS S + SLPPGL AS + ST PCAL VAS TG HST +TLP +GS
Sbjct: 318 PVNPAALASFSKSLRFLSLPPGLYASKLASTQINPCALFVASGFTGRIHSTLITLPCAGS 139
Query: 586 AS*QFLSSVAQCASLQSWRIHFMRMASP 669
AS*QFL S A +SL+ RIHFMRMASP
Sbjct: 138 AS*QFLRSTAHSSSLKQGRIHFMRMASP 55
>gb|AL505163.1|AL505163 AL505163 Hordeum vulgare Barke roots Hordeum vulgare subsp. vulgare
cDNA clone HW07J13V 5', mRNA sequence
Length = 473
Score = 166 bits (357), Expect = 1e-040
Identities = 67/103 (65%), Positives = 84/103 (81%)
Frame = -1 / +2
Query: 659 ILMKWILHDWSDAHCATLLKNCYDALPENGKVIVVECVLPVNTEATPKAQGVFHVDMIML 480
ILMKWIL+ +SD CA LLKNCYDALP +GKVI VEC+LPVN +AT AQG+ VD+ +L
Sbjct: 5 ILMKWILNCFSDDECAILLKNCYDALPAHGKVINVECILPVNPDATNSAQGLISVDVSLL 184
Query: 479 AHNPGGKERYEREFRELAKGAGFSGFKATYIYANAWAIEFIK* 351
A++PGGKERY R+ +LA+ AGF+G KATYIYA+ WA+E+ K*
Sbjct: 185 AYSPGGKERYLRDLEKLARAAGFTGVKATYIYADFWAMEYTK* 313
Score = 108 bits (230), Expect = 4e-023
Identities = 52/85 (61%), Positives = 58/85 (68%)
Frame = +1 / -3
Query: 406 PEKPAPLASSRNSRSYRSLPPGLCASMIMSTWNTPCALGVASVLTGSTHSTTMTLPFSGS 585
P PA LAS S Y SLPPGL AS + ST PCAL VAS TG HST +TLP +GS
Sbjct: 258 PVNPAALASFSRSLRYLSLPPGLYASRLTSTLINPCALFVASGFTGRIHSTLITLPCAGS 79
Query: 586 AS*QFLSSVAQCASLQSWRIHFMRM 660
AS*QFLS +A +SL+ RIHFMRM
Sbjct: 78 AS*QFLSRMAHSSSLKQLRIHFMRM 4
>gb|BM817348.1|BM817348 HC105H12_T3.ab1 HC Hordeum vulgare subsp. vulgare cDNA clone
HC105H12_T3.ab1 similar to Myo-inositol
4-O-methyltransferase,Methionine S-methyltransferase,
mRNA sequence
Length = 885
Score = 162 bits (348), Expect = 2e-039
Identities = 64/105 (60%), Positives = 83/105 (79%)
Frame = -1 / +1
Query: 674 PAGDAILMKWILHDWSDAHCATLLKNCYDALPENGKVIVVECVLPVNTEATPKAQGVFHV 495
P GDAILMKWIL+ +SD CA LLKNCYDALP +GKVI VEC+LPVN +AT AQG+ V
Sbjct: 547 PTGDAILMKWILNCFSDDECAILLKNCYDALPAHGKVINVECILPVNPDATNSAQGLISV 726
Query: 494 DMIMLAHNPGGKERYEREFRELAKGAGFSGFKATYIYANAWAIEF 360
D+ +LA++PG +E+Y R+ +LA+ AGF+ KATYIYA+ W +E+
Sbjct: 727 DVSLLAYSPGRQEKYLRDLEKLARAAGFTRVKATYIYADFWXMEY 861
Score = 105 bits (225), Expect = 2e-022
Identities = 52/85 (61%), Positives = 58/85 (68%)
Frame = +1 / -2
Query: 415 PAPLASSRNSRSYRSLPPGLCASMIMSTWNTPCALGVASVLTGSTHSTTMTLPFSGSAS* 594
PA LAS S Y S PGL AS + ST PCAL VAS TG HST +TLP +GSAS*
Sbjct: 806 PAALASFSRSLRYFSCRPGLYASRLTSTLINPCALFVASGFTGRIHSTLITLPCAGSAS* 627
Query: 595 QFLSSVAQCASLQSWRIHFMRMASP 669
QFLS +A +SL+ RIHFMRMASP
Sbjct: 626 QFLSRMAHSSSLKQLRIHFMRMASP 552
>gb|AJ433184.1|AJ433184 AJ433184 S00002 Hordeum vulgare subsp. vulgare cDNA clone
S0000200017F11F1, mRNA sequence
Length = 357
Score = 160 bits (344), Expect = 7e-039
Identities = 64/97 (65%), Positives = 78/97 (80%)
Frame = -1 / +1
Query: 674 PAGDAILMKWILHDWSDAHCATLLKNCYDALPENGKVIVVECVLPVNTEATPKAQGVFHV 495
P GDAILMKWIL+ +SD CA LLKNCYDALP +GKVI VEC+LPVN +AT QG+ V
Sbjct: 67 PTGDAILMKWILNCFSDDECAILLKNCYDALPAHGKVINVECILPVNPDATNSTQGLISV 246
Query: 494 DMIMLAHNPGGKERYEREFRELAKGAGFSGFKATYIY 384
D+ +LA++PGGKERY R+ +LA+ AGF+G KATYIY
Sbjct: 247 DVSLLAYSPGGKERYLRDLEKLARAAGFTGVKATYIY 357
Score = 113 bits (241), Expect = 1e-024
Identities = 54/88 (61%), Positives = 60/88 (68%)
Frame = +1 / -2
Query: 406 PEKPAPLASSRNSRSYRSLPPGLCASMIMSTWNTPCALGVASVLTGSTHSTTMTLPFSGS 585
P PA LAS S Y SLPPGL AS + ST PC L VAS TG HST +TLP +GS
Sbjct: 335 PVNPAALASFSRSLRYLSLPPGLYASRLTSTLINPCVLFVASGFTGRIHSTLITLPCAGS 156
Query: 586 AS*QFLSSVAQCASLQSWRIHFMRMASP 669
AS*QFLS +A +SL+ RIHFMRMASP
Sbjct: 155 AS*QFLSRMAHSSSLKQLRIHFMRMASP 72
>gb|BQ768004.1|BQ768004 EBro08_SQ010_M12_R root, 3 week, drought-stressed, cv Optic, EBro08
Hordeum vulgare subsp. vulgare cDNA clone
EBro08_SQ010_M12 5', mRNA sequence
Length = 431
Score = 158 bits (339), Expect = 3e-038
Identities = 66/87 (75%), Positives = 73/87 (83%)
Frame = -1 / +2
Query: 581 PENGKVIVVECVLPVNTEATPKAQGVFHVDMIMLAHNPGGKERYEREFRELAKGAGFSGF 402
P +GKV++VEC+LPVN EATPKAQGVFHVDMIMLAHNPGG+ERYEREF LAKGAGF+
Sbjct: 2 PAHGKVVLVECILPVNPEATPKAQGVFHVDMIMLAHNPGGRERYEREFEALAKGAGFAAM 181
Query: 401 KATYIYANAWAIEFIK*IRLPPSPR*D 321
K TYIYANA+AIEF K*I P *D
Sbjct: 182 KTTYIYANAFAIEFTK*IHGNRPPI*D 262
Score = 106 bits (227), Expect = 1e-022
Identities = 44/57 (77%), Positives = 47/57 (82%)
Frame = +1 / -3
Query: 412 KPAPLASSRNSRSYRSLPPGLCASMIMSTWNTPCALGVASVLTGSTHSTTMTLPFSG 582
KPAPLA + NS SY SLPPGLCASMIMSTWNTPCALGVAS TG HST+ TLP +G
Sbjct: 171 KPAPLARASNSLSYLSLPPGLCASMIMSTWNTPCALGVASGFTGRMHSTSTTLPCAG 1
>gb|BQ760872.1|BQ760872 EBro03_SQ003_L10_R root, 3 week, waterlogged, cv Optic, EBro03
Hordeum vulgare subsp. vulgare cDNA clone
EBro03_SQ003_L10 5', mRNA sequence
Length = 458
Score = 156 bits (336), Expect = 9e-038
Identities = 62/79 (78%), Positives = 71/79 (89%)
Frame = -1 / +2
Query: 584 LPENGKVIVVECVLPVNTEATPKAQGVFHVDMIMLAHNPGGKERYEREFRELAKGAGFSG 405
LP +GKV++VEC+LPVN EATPKAQGVF++DMIMLAHNPGG+ERYEREF LAKGAGF+
Sbjct: 2 LPAHGKVVLVECILPVNPEATPKAQGVFNLDMIMLAHNPGGRERYEREFEALAKGAGFAS 181
Query: 404 FKATYIYANAWAIEFIK*I 348
KATYIYANAWAIE K*+
Sbjct: 182 IKATYIYANAWAIELTK*M 238
>gb|BI956488.1|BI956488 HVSMEn0003K24f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0003K24f, mRNA sequence
Length = 884
Score = 114 bits (243), Expect(3) = 3e-037
Identities = 44/69 (63%), Positives = 50/69 (72%)
Frame = -1 / -2
Query: 674 PAGDAILMKWILHDWSDAHCATLLKNCYDALPENGKVIVVECVLPVNTEATPKAQGVFHV 495
P+G KW L +W H TL KNC +A P KV++VEC+LPVN EATPKAQGVFHV
Sbjct: 580 PSGHPTFKKWFLPNWRTDHGGTLFKNCXNAFPGPAKVVLVECILPVNREATPKAQGVFHV 401
Query: 494 DMIMLAHNP 468
DMIMLAHNP
Sbjct: 400 DMIMLAHNP 374
Score = 95.0 bits (201), Expect(2) = 2e-022
Identities = 41/67 (61%), Positives = 49/67 (73%)
Frame = +1 / +3
Query: 469 GLCASMIMSTWNTPCALGVASVLTGSTHSTTMTLPFSGSAS*QFLSSVAQCASLQSWRIH 648
GLCASMIMSTWNTPCALGVAS TG HST+ TL G+A *QFL++V + LQ R H
Sbjct: 375 GLCASMIMSTWNTPCALGVASRFTGRMHSTSTTLAGPGNAX*QFLNNVPPWSVLQFGRNH 554
Query: 649 FMRMASP 669
F+++ P
Sbjct: 555 FLKVGCP 575
Score = 41.4 bits (84), Expect(3) = 3e-037
Identities = 17/23 (73%), Positives = 19/23 (82%)
Frame = -1 / -1
Query: 416 GFSGFKATYIYANAWAIEFIK*I 348
GF+ K TYIYANA+AIEF K*I
Sbjct: 323 GFAAMKTTYIYANAFAIEFTK*I 255
Score = 37.7 bits (76), Expect(3) = 3e-037
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -1 / -3
Query: 470 PGGKERYEREFRELAKG 420
PGG+ERYEREF LAKG
Sbjct: 375 PGGRERYEREFXALAKG 325
Score = 30.4 bits (60), Expect(2) = 2e-022
Identities = 12/18 (66%), Positives = 14/18 (77%)
Frame = +1 / +2
Query: 421 PLASSRNSRSYRSLPPGL 474
PLA + NS SY SLPPG+
Sbjct: 326 PLARAXNSLSYLSLPPGV 379
>gb|BQ662057.1|BQ662057 HR01G02u HR Hordeum vulgare subsp. vulgare cDNA clone HR01G02
3-PRIME, mRNA sequence
Length = 325
Score = 150 bits (323), Expect = 6e-036
Identities = 62/81 (76%), Positives = 70/81 (86%)
Frame = -1 / -2
Query: 590 DALPENGKVIVVECVLPVNTEATPKAQGVFHVDMIMLAHNPGGKERYEREFRELAKGAGF 411
DALP +GKV++VEC+LPVN EAT KAQGVF +DMIMLA NPGG+ERYEREF LAKGAGF
Sbjct: 324 DALPAHGKVVLVECILPVNPEATLKAQGVFTLDMIMLAPNPGGRERYEREFEALAKGAGF 145
Query: 410 SGFKATYIYANAWAIEFIK*I 348
+ KATYIYANAWAIE K*+
Sbjct: 144 ASIKATYIYANAWAIELTK*M 82
Database: Hordeum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:16 PM
Number of letters in database: 175,134,539
Number of sequences in database: 312,970
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 267,091,863
Number of Sequences: 312970
Number of extensions: 4165387
Number of successful extensions: 63225
Number of sequences better than 1.0e-020: 182
length of database: 58,378,179
effective HSP length: 51
effective length of database: 42,416,709
effective search space used: 7338090657
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)