TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2161285.2.2
(798 letters)
Database: Hordeum_nucl_with_EST.fasta
312,970 sequences; 175,134,539 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BJ447915.1|BJ447915 BJ447915 K. Sato unpublished cDNA li... 282 1e-075
gb|BJ455660.1|BJ455660 BJ455660 K. Sato unpublished cDNA li... 282 1e-075
gb|BJ466672.1|BJ466672 BJ466672 K. Sato unpublished cDNA li... 282 1e-075
gb|BM817330.1|BM817330 HC111G07_T3.ab1 HC Hordeum vulgare s... 282 2e-075
gb|AV917599.1|AV917599 AV917599 K. Sato unpublished cDNA li... 273 1e-072
gb|AV927973.1|AV927973 AV927973 K. Sato unpublished cDNA li... 273 1e-072
gb|AV930332.1|AV930332 AV930332 K. Sato unpublished cDNA li... 273 1e-072
gb|AV934949.1|AV934949 AV934949 K. Sato unpublished cDNA li... 273 1e-072
gb|BM368797.2|BM368797 EBem08_SQ004_K02_R embryo, 40 DPA, n... 228 3e-059
gb|BI776606.2|BI776606 EBpi07_SQ001_B24_R pistil, 12 DPA, n... 210 6e-054
gb|BU981962.1|BU981962 HA25B23r HA Hordeum vulgare subsp. v... 206 1e-052
gb|AV930658.1|AV930658 AV930658 K. Sato unpublished cDNA li... 204 4e-052
gb|BF631424.2|BF631424 HVSMEb0015O10f Hordeum vulgare seedl... 199 2e-050
gb|BI948632.1|BI948632 HVSMEl0010F06f Hordeum vulgare spike... 166 3e-046
gb|BU971681.1|BU971681 HB19F12r BC Hordeum vulgare subsp. v... 185 3e-046
gb|BF259719.2|BF259719 HVSMEf0020B07f Hordeum vulgare seedl... 130 2e-037
gb|CA028489.1|CA028489 HZ62C12r HZ Hordeum vulgare subsp. v... 155 4e-037
gb|CA025468.1|CA025468 HZ52E03r HZ Hordeum vulgare subsp. v... 149 2e-035
gb|AL500477.1|AL500477 AL500477 Hordeum vulgare Barke etiol... 146 2e-035
gb|BM097298.1|BM097298 EBro01_SQ004_M09_R root, 3 week, hyd... 138 3e-032
gb|BE420972.1|BE420972 HWM004.E01 ITEC HWM Barley Leaf Libr... 92 5e-032
gb|AJ462649.1|AJ462649 AJ462649 S00002 Hordeum vulgare subs... 131 6e-030
gb|AL500044.1|AL500044 AL500044 Hordeum vulgare Barke etiol... 111 1e-028
gb|BJ464212.1|BJ464212 BJ464212 K. Sato unpublished cDNA li... 126 2e-028
gb|BI951143.1|BI951143 HVSMEl0024K06f Hordeum vulgare spike... 122 2e-027
gb|BI947203.1|BI947203 HVSMEl0004D16f Hordeum vulgare spike... 118 4e-027
gb|BF267850.2|BF267850 HV_CEa0019B08f Hordeum vulgare seedl... 84 6e-027
gb|AV836811.1|AV836811 AV836811 K. Sato unpublished cDNA li... 108 1e-024
gb|BE437755.1|BE437755 SFR007.B08F990617 ITEC SFR Barley Le... 108 3e-023
gb|BU988298.1|BU988298 HF17D19r HF Hordeum vulgare subsp. v... 104 6e-022
>gb|BJ447915.1|BJ447915 BJ447915 K. Sato unpublished cDNA library, cv. Akashinriki
vegetative stage leaves Hordeum vulgare subsp. vulgare
cDNA clone baak17l17 5', mRNA sequence
Length = 712
Score = 282 bits (611), Expect = 1e-075
Identities = 116/163 (71%), Positives = 131/163 (80%)
Frame = +1 / +1
Query: 1 PLFVTDNDQTWNPDAIVFNSWQHYGTPSYWMQTXFRRVNRAIVHPVNIXXXXXXXXXXXX 180
PLFV DNDQTWNPDAIVFNSWQ YGTPSYWMQ FR + A++HP+ I
Sbjct: 148 PLFVNDNDQTWNPDAIVFNSWQQYGTPSYWMQKFFRESSGAMIHPITISSSYSGSLAASA 327
Query: 181 ITWQDAENSFLRVKVVNFGSDTVNLTVSTSGLGASVNALGSTATVLTSGNVMDENSFSNP 360
ITWQD+ N+FLRVK+VNFGSDTV+LT+S SGL AS+NALGS ATVLTS NV DENSFSNP
Sbjct: 328 ITWQDSGNNFLRVKIVNFGSDTVSLTISVSGLQASINALGSNATVLTSSNVKDENSFSNP 507
Query: 361 NKVAPVKSQLSNAAEQMQVTLAPHSFTAFDLALAEPKLVAEI* 489
KV PV SQL NAAEQMQVTLA HSF++FDLALA+ +LVAE+*
Sbjct: 508 TKVVPVTSQLHNAAEQMQVTLAAHSFSSFDLALAQSELVAEM* 636
Score = 243 bits (525), Expect = 9e-064
Identities = 121/162 (74%), Positives = 123/162 (75%)
Frame = -2 / -3
Query: 488 HISATSLGSASARSKAVKE*GASVTCICSAALLSWLFTGATLFGLLKEFSSMTLPDVRTV 309
HISATS ASARS KE ASVTCICSAAL + L TG TL GLLKEFSS TL DVRTV
Sbjct: 635 HISATSSD*ASARSNEEKEWAASVTCICSAALCN*LVTGTTLVGLLKEFSSFTLLDVRTV 456
Query: 308 AVDPSALTLAPSPLVETVRLTVSDPKFTTFTLRKLFSASCHVIADAASELEYRELILTG* 129
A DPSAL LA SP E VRLTVSDPKFT FTLRKLF SC VIADAA E E ELI+ G*
Sbjct: 455 AFDPSALMLAWSPDTEIVRLTVSDPKFTIFTLRKLFPESCQVIADAAREPE*LELIVIG* 276
Query: 128 TMARLTLRKXVCIQ*LGVP*CCQELKTIASGFHVWSLSVTKS 3
MA L RK CIQ*LGVP CCQELKTIASGFHV SLS TKS
Sbjct: 275 IMAPLDSRKNFCIQ*LGVPYCCQELKTIASGFHV*SLSFTKS 150
Score = 190 bits (409), Expect = 9e-048
Identities = 88/162 (54%), Positives = 111/162 (68%)
Frame = -1 / -2
Query: 489 SYLRHKLGLSQRQIEGGEGVRSQRDLHLLRGVAQLAFHRRNLVRVTEGVLVHDVARREDG 310
S+L KLGLS+R++E GEGV S+RDLHL RGV QL H +L VTE + + +A RE+
Sbjct: 636 SHLCDKLGLSKRKVERGEGVGSERDLHLFRGVMQLTCHGHDLGWVTERIFILYIAGRENS 457
Query: 309 GG*SQRVDAGPESARGDREVNGVRPEVHDLHSQEAILCILPRDRRRGQRTRVPGTDINRM 130
* QRVDA E D E +GVRPEVH+L+SQE I ILP D R RTRV GTD N M
Sbjct: 456 SV*PQRVDASLEPGHRDCEAHGVRPEVHNLYSQEVIPGILPGDSRCC*RTRVAGTDCNWM 277
Query: 129 NNGAVDSXEXXLHPVARSXIVLPGVEDNSVRVPRLVIVGHEE 4
N+G E LHPV RS ++LPGVED+S+ +PRL++V ++E
Sbjct: 276 NHGTTRFAEKLLHPVTRSSVLLPGVEDDSIWIPRLIVVVYKE 151
Score = 146 bits (313), Expect = 2e-034
Identities = 86/160 (53%), Positives = 95/160 (59%)
Frame = +2 / +2
Query: 5 SS*PTMTKRGTRTLLSSTPGNTMXLLATGCRXFSXESTAPLFIRLISVPGTRVRWPRLRS 184
S * T KRG + L SSTPGN LL TGCR FS P FI+L SVP T V L S
Sbjct: 152 SL*TTTIKRGIQMLSSSTPGNNTELLVTGCRSFSANLVVP*FIQLQSVPATLVL*QHLLS 331
Query: 185 RGRMQRIAS*E*RS*TSGRTPLTSRSPRADSGPASTRWDQPPPSSRLATSWTRTPSVTRT 364
GR+ I S*E*R *TSGRTP S+S S ASTRW Q SR A + SVT+
Sbjct: 332 PGRIPGITS*E*RL*TSGRTP*ASQSLCPGSRLASTRWGQTLLFSRPAM*RMKILSVTQP 511
Query: 365 RLRR*KAS*ATPRSRCRSRWLLTPSPPSIWRWLSPSLWRR 484
R *+ S TPR+RCRSR L TPSP S R LSPSL +R
Sbjct: 512 RSCP*QVSCITPRNRCRSRSLPTPSPRSTLRLLSPSLSQR 631
Score = 123 bits (264), Expect = 9e-028
Identities = 65/133 (48%), Positives = 78/133 (58%)
Frame = +3 / +3
Query: 90 DADXFPXSQPRHCSSG*YQFPVLEFAGRVCDHVAGCRE*LPESEGRELRVGHR*PHGLHE 269
DA+ FP H SS QF +L F+ +C H+AG RE*LPES+ ELRVGHR PH L
Sbjct: 237 DAEVFPRI*WCHDSSNYNQFQLLWFSSSICYHLAGFRE*LPESKDCELRVGHREPHNLCV 416
Query: 270 RTRGQRQRAGINRHRPHVWQRHGRELLQ*PEQGCAGEKPAEQRRGADAGHAGSSLLHRLR 449
R G QRAG+ R+ HV Q G + Q*P QG A +K RRG DAGHA LL +R
Sbjct: 417 RAPG*HQRAGVKRYCSHVQQCKG*KFFQ*PNQGRARDKSVA*RRGTDAGHARCPLLLLVR 596
Query: 450 SGAG*AQACGGDM 488
A +AC D+
Sbjct: 597 PCACSVRACRRDV 635
>gb|BJ455660.1|BJ455660 BJ455660 K. Sato unpublished cDNA library, cv. Akashinriki
vegetative stage leaves Hordeum vulgare subsp. vulgare
cDNA clone baak17l17 3', mRNA sequence
Length = 704
Score = 282 bits (611), Expect = 1e-075
Identities = 116/163 (71%), Positives = 131/163 (80%)
Frame = +1 / -3
Query: 1 PLFVTDNDQTWNPDAIVFNSWQHYGTPSYWMQTXFRRVNRAIVHPVNIXXXXXXXXXXXX 180
PLFV DNDQTWNPDAIVFNSWQ YGTPSYWMQ FR + A++HP+ I
Sbjct: 648 PLFVNDNDQTWNPDAIVFNSWQQYGTPSYWMQKFFRESSGAMIHPITISSSYSGSLAASA 469
Query: 181 ITWQDAENSFLRVKVVNFGSDTVNLTVSTSGLGASVNALGSTATVLTSGNVMDENSFSNP 360
ITWQD+ N+FLRVK+VNFGSDTV+LT+S SGL AS+NALGS ATVLTS NV DENSFSNP
Sbjct: 468 ITWQDSGNNFLRVKIVNFGSDTVSLTISVSGLQASINALGSNATVLTSSNVKDENSFSNP 289
Query: 361 NKVAPVKSQLSNAAEQMQVTLAPHSFTAFDLALAEPKLVAEI* 489
KV PV SQL NAAEQMQVTLA HSF++FDLALA+ +LVAE+*
Sbjct: 288 TKVVPVTSQLHNAAEQMQVTLAAHSFSSFDLALAQSELVAEM* 160
Score = 243 bits (525), Expect = 9e-064
Identities = 121/162 (74%), Positives = 123/162 (75%)
Frame = -2 / +2
Query: 488 HISATSLGSASARSKAVKE*GASVTCICSAALLSWLFTGATLFGLLKEFSSMTLPDVRTV 309
HISATS ASARS KE ASVTCICSAAL + L TG TL GLLKEFSS TL DVRTV
Sbjct: 161 HISATSSD*ASARSNEEKEWAASVTCICSAALCN*LVTGTTLVGLLKEFSSFTLLDVRTV 340
Query: 308 AVDPSALTLAPSPLVETVRLTVSDPKFTTFTLRKLFSASCHVIADAASELEYRELILTG* 129
A DPSAL LA SP E VRLTVSDPKFT FTLRKLF SC VIADAA E E ELI+ G*
Sbjct: 341 AFDPSALMLAWSPDTEIVRLTVSDPKFTIFTLRKLFPESCQVIADAAREPE*LELIVIG* 520
Query: 128 TMARLTLRKXVCIQ*LGVP*CCQELKTIASGFHVWSLSVTKS 3
MA L RK CIQ*LGVP CCQELKTIASGFHV SLS TKS
Sbjct: 521 IMAPLDSRKNFCIQ*LGVPYCCQELKTIASGFHV*SLSFTKS 646
Score = 190 bits (409), Expect = 9e-048
Identities = 88/162 (54%), Positives = 111/162 (68%)
Frame = -1 / +1
Query: 489 SYLRHKLGLSQRQIEGGEGVRSQRDLHLLRGVAQLAFHRRNLVRVTEGVLVHDVARREDG 310
S+L KLGLS+R++E GEGV S+RDLHL RGV QL H +L VTE + + +A RE+
Sbjct: 160 SHLCDKLGLSKRKVERGEGVGSERDLHLFRGVMQLTCHGHDLGWVTERIFILYIAGRENS 339
Query: 309 GG*SQRVDAGPESARGDREVNGVRPEVHDLHSQEAILCILPRDRRRGQRTRVPGTDINRM 130
* QRVDA E D E +GVRPEVH+L+SQE I ILP D R RTRV GTD N M
Sbjct: 340 SV*PQRVDASLEPGHRDCEAHGVRPEVHNLYSQEVIPGILPGDSRCC*RTRVAGTDCNWM 519
Query: 129 NNGAVDSXEXXLHPVARSXIVLPGVEDNSVRVPRLVIVGHEE 4
N+G E LHPV RS ++LPGVED+S+ +PRL++V ++E
Sbjct: 520 NHGTTRFAEKLLHPVTRSSVLLPGVEDDSIWIPRLIVVVYKE 645
Score = 146 bits (313), Expect = 2e-034
Identities = 86/160 (53%), Positives = 95/160 (59%)
Frame = +2 / -1
Query: 5 SS*PTMTKRGTRTLLSSTPGNTMXLLATGCRXFSXESTAPLFIRLISVPGTRVRWPRLRS 184
S * T KRG + L SSTPGN LL TGCR FS P FI+L SVP T V L S
Sbjct: 644 SL*TTTIKRGIQMLSSSTPGNNTELLVTGCRSFSANLVVP*FIQLQSVPATLVL*QHLLS 465
Query: 185 RGRMQRIAS*E*RS*TSGRTPLTSRSPRADSGPASTRWDQPPPSSRLATSWTRTPSVTRT 364
GR+ I S*E*R *TSGRTP S+S S ASTRW Q SR A + SVT+
Sbjct: 464 PGRIPGITS*E*RL*TSGRTP*ASQSLCPGSRLASTRWGQTLLFSRPAM*RMKILSVTQP 285
Query: 365 RLRR*KAS*ATPRSRCRSRWLLTPSPPSIWRWLSPSLWRR 484
R *+ S TPR+RCRSR L TPSP S R LSPSL +R
Sbjct: 284 RSCP*QVSCITPRNRCRSRSLPTPSPRSTLRLLSPSLSQR 165
Score = 123 bits (264), Expect = 9e-028
Identities = 65/133 (48%), Positives = 78/133 (58%)
Frame = +3 / -2
Query: 90 DADXFPXSQPRHCSSG*YQFPVLEFAGRVCDHVAGCRE*LPESEGRELRVGHR*PHGLHE 269
DA+ FP H SS QF +L F+ +C H+AG RE*LPES+ ELRVGHR PH L
Sbjct: 559 DAEVFPRI*WCHDSSNYNQFQLLWFSSSICYHLAGFRE*LPESKDCELRVGHREPHNLCV 380
Query: 270 RTRGQRQRAGINRHRPHVWQRHGRELLQ*PEQGCAGEKPAEQRRGADAGHAGSSLLHRLR 449
R G QRAG+ R+ HV Q G + Q*P QG A +K RRG DAGHA LL +R
Sbjct: 379 RAPG*HQRAGVKRYCSHVQQCKG*KFFQ*PNQGRARDKSVA*RRGTDAGHARCPLLLLVR 200
Query: 450 SGAG*AQACGGDM 488
A +AC D+
Sbjct: 199 PCACSVRACRRDV 161
>gb|BJ466672.1|BJ466672 BJ466672 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags33f17 3', mRNA sequence
Length = 715
Score = 282 bits (611), Expect = 1e-075
Identities = 116/163 (71%), Positives = 131/163 (80%)
Frame = +1 / -3
Query: 1 PLFVTDNDQTWNPDAIVFNSWQHYGTPSYWMQTXFRRVNRAIVHPVNIXXXXXXXXXXXX 180
PLFV DNDQTWNPDAIVFNSWQ YGTPSYWMQ FR + A++HP+ I
Sbjct: 674 PLFVNDNDQTWNPDAIVFNSWQQYGTPSYWMQKFFRESSGAMIHPITISSSYSGSLAASA 495
Query: 181 ITWQDAENSFLRVKVVNFGSDTVNLTVSTSGLGASVNALGSTATVLTSGNVMDENSFSNP 360
ITWQD+ N+FLRVK+VNFGSDTV+LT+S SGL AS+NALGS ATVLTS NV DENSFSNP
Sbjct: 494 ITWQDSGNNFLRVKIVNFGSDTVSLTISVSGLQASINALGSNATVLTSSNVKDENSFSNP 315
Query: 361 NKVAPVKSQLSNAAEQMQVTLAPHSFTAFDLALAEPKLVAEI* 489
KV PV SQL NAAEQMQVTLA HSF++FDLALA+ +LVAE+*
Sbjct: 314 TKVVPVTSQLHNAAEQMQVTLAAHSFSSFDLALAQSELVAEM* 186
Score = 243 bits (525), Expect = 9e-064
Identities = 121/162 (74%), Positives = 123/162 (75%)
Frame = -2 / +1
Query: 488 HISATSLGSASARSKAVKE*GASVTCICSAALLSWLFTGATLFGLLKEFSSMTLPDVRTV 309
HISATS ASARS KE ASVTCICSAAL + L TG TL GLLKEFSS TL DVRTV
Sbjct: 187 HISATSSD*ASARSNEEKEWAASVTCICSAALCN*LVTGTTLVGLLKEFSSFTLLDVRTV 366
Query: 308 AVDPSALTLAPSPLVETVRLTVSDPKFTTFTLRKLFSASCHVIADAASELEYRELILTG* 129
A DPSAL LA SP E VRLTVSDPKFT FTLRKLF SC VIADAA E E ELI+ G*
Sbjct: 367 AFDPSALMLAWSPDTEIVRLTVSDPKFTIFTLRKLFPESCQVIADAAREPE*LELIVIG* 546
Query: 128 TMARLTLRKXVCIQ*LGVP*CCQELKTIASGFHVWSLSVTKS 3
MA L RK CIQ*LGVP CCQELKTIASGFHV SLS TKS
Sbjct: 547 IMAPLDSRKNFCIQ*LGVPYCCQELKTIASGFHV*SLSFTKS 672
Score = 190 bits (409), Expect = 9e-048
Identities = 88/162 (54%), Positives = 111/162 (68%)
Frame = -1 / +3
Query: 489 SYLRHKLGLSQRQIEGGEGVRSQRDLHLLRGVAQLAFHRRNLVRVTEGVLVHDVARREDG 310
S+L KLGLS+R++E GEGV S+RDLHL RGV QL H +L VTE + + +A RE+
Sbjct: 186 SHLCDKLGLSKRKVERGEGVGSERDLHLFRGVMQLTCHGHDLGWVTERIFILYIAGRENS 365
Query: 309 GG*SQRVDAGPESARGDREVNGVRPEVHDLHSQEAILCILPRDRRRGQRTRVPGTDINRM 130
* QRVDA E D E +GVRPEVH+L+SQE I ILP D R RTRV GTD N M
Sbjct: 366 SV*PQRVDASLEPGHRDCEAHGVRPEVHNLYSQEVIPGILPGDSRCC*RTRVAGTDCNWM 545
Query: 129 NNGAVDSXEXXLHPVARSXIVLPGVEDNSVRVPRLVIVGHEE 4
N+G E LHPV RS ++LPGVED+S+ +PRL++V ++E
Sbjct: 546 NHGTTRFAEKLLHPVTRSSVLLPGVEDDSIWIPRLIVVVYKE 671
Score = 146 bits (313), Expect = 2e-034
Identities = 86/160 (53%), Positives = 95/160 (59%)
Frame = +2 / -1
Query: 5 SS*PTMTKRGTRTLLSSTPGNTMXLLATGCRXFSXESTAPLFIRLISVPGTRVRWPRLRS 184
S * T KRG + L SSTPGN LL TGCR FS P FI+L SVP T V L S
Sbjct: 670 SL*TTTIKRGIQMLSSSTPGNNTELLVTGCRSFSANLVVP*FIQLQSVPATLVL*QHLLS 491
Query: 185 RGRMQRIAS*E*RS*TSGRTPLTSRSPRADSGPASTRWDQPPPSSRLATSWTRTPSVTRT 364
GR+ I S*E*R *TSGRTP S+S S ASTRW Q SR A + SVT+
Sbjct: 490 PGRIPGITS*E*RL*TSGRTP*ASQSLCPGSRLASTRWGQTLLFSRPAM*RMKILSVTQP 311
Query: 365 RLRR*KAS*ATPRSRCRSRWLLTPSPPSIWRWLSPSLWRR 484
R *+ S TPR+RCRSR L TPSP S R LSPSL +R
Sbjct: 310 RSCP*QVSCITPRNRCRSRSLPTPSPRSTLRLLSPSLSQR 191
Score = 123 bits (264), Expect = 9e-028
Identities = 65/133 (48%), Positives = 78/133 (58%)
Frame = +3 / -2
Query: 90 DADXFPXSQPRHCSSG*YQFPVLEFAGRVCDHVAGCRE*LPESEGRELRVGHR*PHGLHE 269
DA+ FP H SS QF +L F+ +C H+AG RE*LPES+ ELRVGHR PH L
Sbjct: 585 DAEVFPRI*WCHDSSNYNQFQLLWFSSSICYHLAGFRE*LPESKDCELRVGHREPHNLCV 406
Query: 270 RTRGQRQRAGINRHRPHVWQRHGRELLQ*PEQGCAGEKPAEQRRGADAGHAGSSLLHRLR 449
R G QRAG+ R+ HV Q G + Q*P QG A +K RRG DAGHA LL +R
Sbjct: 405 RAPG*HQRAGVKRYCSHVQQCKG*KFFQ*PNQGRARDKSVA*RRGTDAGHARCPLLLLVR 226
Query: 450 SGAG*AQACGGDM 488
A +AC D+
Sbjct: 225 PCACSVRACRRDV 187
>gb|BM817330.1|BM817330 HC111G07_T3.ab1 HC Hordeum vulgare subsp. vulgare cDNA clone
HC111G07_T3.ab1 similar to (AC011708) putative
alpha-L-arabinofuranosidase [Arabidopsis thaliana], mRNA
sequence
Length = 924
Score = 282 bits (610), Expect = 2e-075
Identities = 116/163 (71%), Positives = 130/163 (79%)
Frame = +1 / +3
Query: 1 PLFVTDNDQTWNPDAIVFNSWQHYGTPSYWMQTXFRRVNRAIVHPVNIXXXXXXXXXXXX 180
PLFV DNDQTWNPDAIVFNSWQ YGTPSYWMQ FR + A++HP+ I
Sbjct: 294 PLFVNDNDQTWNPDAIVFNSWQQYGTPSYWMQKFFRESSGAMIHPITISSSYSGSLAASA 473
Query: 181 ITWQDAENSFLRVKVVNFGSDTVNLTVSTSGLGASVNALGSTATVLTSGNVMDENSFSNP 360
ITWQD+ N+FLRVK+VNFGSDTV+LT+S SGL AS+NALGS ATVLTS NV DENSFSNP
Sbjct: 474 ITWQDSGNNFLRVKIVNFGSDTVSLTISVSGLQASINALGSNATVLTSSNVKDENSFSNP 653
Query: 361 NKVAPVKSQLSNAAEQMQVTLAPHSFTAFDLALAEPKLVAEI* 489
KV PV SQL NAAEQMQVTLA HSF +FDLALA+ +LVAE+*
Sbjct: 654 TKVVPVTSQLHNAAEQMQVTLAAHSFXSFDLALAQSELVAEM* 782
Score = 243 bits (526), Expect = 7e-064
Identities = 121/162 (74%), Positives = 123/162 (75%)
Frame = -2 / -3
Query: 488 HISATSLGSASARSKAVKE*GASVTCICSAALLSWLFTGATLFGLLKEFSSMTLPDVRTV 309
HISATS ASARS KE ASVTCICSAAL + L TG TL GLLKEFSS TL DVRTV
Sbjct: 781 HISATSSD*ASARSNEXKEWAASVTCICSAALCN*LVTGTTLVGLLKEFSSFTLLDVRTV 602
Query: 308 AVDPSALTLAPSPLVETVRLTVSDPKFTTFTLRKLFSASCHVIADAASELEYRELILTG* 129
A DPSAL LA SP E VRLTVSDPKFT FTLRKLF SC VIADAA E E ELI+ G*
Sbjct: 601 AFDPSALMLAWSPDTEIVRLTVSDPKFTIFTLRKLFPESCQVIADAAREPE*LELIVIG* 422
Query: 128 TMARLTLRKXVCIQ*LGVP*CCQELKTIASGFHVWSLSVTKS 3
MA L RK CIQ*LGVP CCQELKTIASGFHV SLS TKS
Sbjct: 421 IMAPLDSRKNFCIQ*LGVPYCCQELKTIASGFHV*SLSFTKS 296
Score = 187 bits (402), Expect = 9e-047
Identities = 87/162 (53%), Positives = 110/162 (67%)
Frame = -1 / -2
Query: 489 SYLRHKLGLSQRQIEGGEGVRSQRDLHLLRGVAQLAFHRRNLVRVTEGVLVHDVARREDG 310
S+L KLGLS+R++E EGV S+RDLHL RGV QL H +L VTE + + +A RE+
Sbjct: 782 SHLCDKLGLSKRKVERXEGVGSERDLHLFRGVMQLTCHGHDLGWVTERIFILYIAGRENS 603
Query: 309 GG*SQRVDAGPESARGDREVNGVRPEVHDLHSQEAILCILPRDRRRGQRTRVPGTDINRM 130
* QRVDA E D E +GVRPEVH+L+SQE I ILP D R RTRV GTD N M
Sbjct: 602 SV*PQRVDASLEPGHRDCEAHGVRPEVHNLYSQEVIPGILPGDSRCC*RTRVAGTDCNWM 423
Query: 129 NNGAVDSXEXXLHPVARSXIVLPGVEDNSVRVPRLVIVGHEE 4
N+G E LHPV RS ++LPGVED+S+ +PRL++V ++E
Sbjct: 422 NHGTTRFAEKLLHPVTRSSVLLPGVEDDSIWIPRLIVVVYKE 297
Score = 142 bits (304), Expect = 3e-033
Identities = 85/160 (53%), Positives = 94/160 (58%)
Frame = +2 / +1
Query: 5 SS*PTMTKRGTRTLLSSTPGNTMXLLATGCRXFSXESTAPLFIRLISVPGTRVRWPRLRS 184
S * T KRG + L SSTPGN LL TGCR FS P FI+L SVP T V L S
Sbjct: 298 SL*TTTIKRGIQMLSSSTPGNNTELLVTGCRSFSANLVVP*FIQLQSVPATLVL*QHLLS 477
Query: 185 RGRMQRIAS*E*RS*TSGRTPLTSRSPRADSGPASTRWDQPPPSSRLATSWTRTPSVTRT 364
GR+ I S*E*R *TSGRTP S+S S ASTRW Q SR A + SVT+
Sbjct: 478 PGRIPGITS*E*RL*TSGRTP*ASQSLCPGSRLASTRWGQTLLFSRPAM*RMKILSVTQP 657
Query: 365 RLRR*KAS*ATPRSRCRSRWLLTPSPPSIWRWLSPSLWRR 484
R *+ S TPR+RCRSR L TPS S R LSPSL +R
Sbjct: 658 RSCP*QVSCITPRNRCRSRSLPTPSXRSTLRLLSPSLSQR 777
Score = 123 bits (264), Expect = 9e-028
Identities = 65/133 (48%), Positives = 78/133 (58%)
Frame = +3 / +2
Query: 90 DADXFPXSQPRHCSSG*YQFPVLEFAGRVCDHVAGCRE*LPESEGRELRVGHR*PHGLHE 269
DA+ FP H SS QF +L F+ +C H+AG RE*LPES+ ELRVGHR PH L
Sbjct: 383 DAEVFPRI*WCHDSSNYNQFQLLWFSSSICYHLAGFRE*LPESKDCELRVGHREPHNLCV 562
Query: 270 RTRGQRQRAGINRHRPHVWQRHGRELLQ*PEQGCAGEKPAEQRRGADAGHAGSSLLHRLR 449
R G QRAG+ R+ HV Q G + Q*P QG A +K RRG DAGHA LL +R
Sbjct: 563 RAPG*HQRAGVKRYCSHVQQCKG*KFFQ*PNQGRARDKSVA*RRGTDAGHARCPLLLLVR 742
Query: 450 SGAG*AQACGGDM 488
A +AC D+
Sbjct: 743 PCACSVRACRRDV 781
>gb|AV917599.1|AV917599 AV917599 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags10j19 3', mRNA sequence
Length = 656
Score = 273 bits (590), Expect = 1e-072
Identities = 112/158 (70%), Positives = 127/158 (80%)
Frame = +1 / -2
Query: 16 DNDQTWNPDAIVFNSWQHYGTPSYWMQTXFRRVNRAIVHPVNIXXXXXXXXXXXXITWQD 195
DNDQTWNPDAIVFNSWQ YGTPSYWMQ FR + A++HP+ I ITWQD
Sbjct: 652 DNDQTWNPDAIVFNSWQQYGTPSYWMQKFFRESSGAMIHPITISSSYSGSLAASAITWQD 473
Query: 196 AENSFLRVKVVNFGSDTVNLTVSTSGLGASVNALGSTATVLTSGNVMDENSFSNPNKVAP 375
+ N+FLRVK+VNFGSDTV+LT+S SGL AS+NALGS ATVLTS NV DENSFSNP KV P
Sbjct: 472 SGNNFLRVKIVNFGSDTVSLTISVSGLQASINALGSNATVLTSSNVKDENSFSNPTKVVP 293
Query: 376 VKSQLSNAAEQMQVTLAPHSFTAFDLALAEPKLVAEI* 489
V SQL NAAEQMQVTLA HSF++FDLALA+ +LVAE+*
Sbjct: 292 VTSQLHNAAEQMQVTLAAHSFSSFDLALAQSELVAEM* 179
Score = 237 bits (512), Expect = 6e-062
Identities = 118/158 (74%), Positives = 120/158 (75%)
Frame = -2 / +3
Query: 488 HISATSLGSASARSKAVKE*GASVTCICSAALLSWLFTGATLFGLLKEFSSMTLPDVRTV 309
HISATS ASARS KE ASVTCICSAAL + L TG TL GLLKEFSS TL DVRTV
Sbjct: 180 HISATSSD*ASARSNEEKEWAASVTCICSAALCN*LVTGTTLVGLLKEFSSFTLLDVRTV 359
Query: 308 AVDPSALTLAPSPLVETVRLTVSDPKFTTFTLRKLFSASCHVIADAASELEYRELILTG* 129
A DPSAL LA SP E VRLTVSDPKFT FTLRKLF SC VIADAA E E ELI+ G*
Sbjct: 360 AFDPSALMLAWSPDTEIVRLTVSDPKFTIFTLRKLFPESCQVIADAAREPE*LELIVIG* 539
Query: 128 TMARLTLRKXVCIQ*LGVP*CCQELKTIASGFHVWSLS 15
MA L RK CIQ*LGVP CCQELKTIASGFHV SLS
Sbjct: 540 IMAPLDSRKNFCIQ*LGVPYCCQELKTIASGFHV*SLS 653
Score = 188 bits (404), Expect = 5e-047
Identities = 87/158 (55%), Positives = 108/158 (68%)
Frame = -1 / +2
Query: 489 SYLRHKLGLSQRQIEGGEGVRSQRDLHLLRGVAQLAFHRRNLVRVTEGVLVHDVARREDG 310
S+L KLGLS+R++E GEGV S+RDLHL RGV QL H +L VTE + + +A RE+
Sbjct: 179 SHLCDKLGLSKRKVERGEGVGSERDLHLFRGVMQLTCHGHDLGWVTERIFILYIAGRENS 358
Query: 309 GG*SQRVDAGPESARGDREVNGVRPEVHDLHSQEAILCILPRDRRRGQRTRVPGTDINRM 130
* QRVDA E D E +GVRPEVH+L+SQE I ILP D R RTRV GTD N M
Sbjct: 359 SV*PQRVDASLEPGHRDCEAHGVRPEVHNLYSQEVIPGILPGDSRCC*RTRVAGTDCNWM 538
Query: 129 NNGAVDSXEXXLHPVARSXIVLPGVEDNSVRVPRLVIV 16
N+G E LHPV RS ++LPGVED+S+ +PRL++V
Sbjct: 539 NHGTTRFAEKLLHPVTRSSVLLPGVEDDSIWIPRLIVV 652
Score = 145 bits (311), Expect = 3e-034
Identities = 84/156 (53%), Positives = 93/156 (59%)
Frame = +2 / -3
Query: 17 TMTKRGTRTLLSSTPGNTMXLLATGCRXFSXESTAPLFIRLISVPGTRVRWPRLRSRGRM 196
T KRG + L SSTPGN LL TGCR FS P FI+L SVP T V L S GR+
Sbjct: 651 TTIKRGIQMLSSSTPGNNTELLVTGCRSFSANLVVP*FIQLQSVPATLVL*QHLLSPGRI 472
Query: 197 QRIAS*E*RS*TSGRTPLTSRSPRADSGPASTRWDQPPPSSRLATSWTRTPSVTRTRLRR 376
I S*E*R *TSGRTP S+S S ASTRW Q SR A + SVT+ R
Sbjct: 471 PGITS*E*RL*TSGRTP*ASQSLCPGSRLASTRWGQTLLFSRPAM*RMKILSVTQPRSCP 292
Query: 377 *KAS*ATPRSRCRSRWLLTPSPPSIWRWLSPSLWRR 484
*+ S TPR+RCRSR L TPSP S R LSPSL +R
Sbjct: 291 *QVSCITPRNRCRSRSLPTPSPRSTLRLLSPSLSQR 184
Score = 123 bits (264), Expect = 9e-028
Identities = 65/133 (48%), Positives = 78/133 (58%)
Frame = +3 / -1
Query: 90 DADXFPXSQPRHCSSG*YQFPVLEFAGRVCDHVAGCRE*LPESEGRELRVGHR*PHGLHE 269
DA+ FP H SS QF +L F+ +C H+AG RE*LPES+ ELRVGHR PH L
Sbjct: 578 DAEVFPRI*WCHDSSNYNQFQLLWFSSSICYHLAGFRE*LPESKDCELRVGHREPHNLCV 399
Query: 270 RTRGQRQRAGINRHRPHVWQRHGRELLQ*PEQGCAGEKPAEQRRGADAGHAGSSLLHRLR 449
R G QRAG+ R+ HV Q G + Q*P QG A +K RRG DAGHA LL +R
Sbjct: 398 RAPG*HQRAGVKRYCSHVQQCKG*KFFQ*PNQGRARDKSVA*RRGTDAGHARCPLLLLVR 219
Query: 450 SGAG*AQACGGDM 488
A +AC D+
Sbjct: 218 PCACSVRACRRDV 180
>gb|AV927973.1|AV927973 AV927973 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp.
vulgare cDNA clone basd13h16 3', mRNA sequence
Length = 642
Score = 273 bits (590), Expect = 1e-072
Identities = 112/158 (70%), Positives = 127/158 (80%)
Frame = +1 / -2
Query: 16 DNDQTWNPDAIVFNSWQHYGTPSYWMQTXFRRVNRAIVHPVNIXXXXXXXXXXXXITWQD 195
DNDQTWNPDAIVFNSWQ YGTPSYWMQ FR + A++HP+ I ITWQD
Sbjct: 638 DNDQTWNPDAIVFNSWQQYGTPSYWMQKFFRESSGAMIHPITISSSYSGSLAASAITWQD 459
Query: 196 AENSFLRVKVVNFGSDTVNLTVSTSGLGASVNALGSTATVLTSGNVMDENSFSNPNKVAP 375
+ N+FLRVK+VNFGSDTV+LT+S SGL AS+NALGS ATVLTS NV DENSFSNP KV P
Sbjct: 458 SGNNFLRVKIVNFGSDTVSLTISVSGLQASINALGSNATVLTSSNVKDENSFSNPTKVVP 279
Query: 376 VKSQLSNAAEQMQVTLAPHSFTAFDLALAEPKLVAEI* 489
V SQL NAAEQMQVTLA HSF++FDLALA+ +LVAE+*
Sbjct: 278 VTSQLHNAAEQMQVTLAAHSFSSFDLALAQSELVAEM* 165
Score = 237 bits (512), Expect = 6e-062
Identities = 118/158 (74%), Positives = 120/158 (75%)
Frame = -2 / +1
Query: 488 HISATSLGSASARSKAVKE*GASVTCICSAALLSWLFTGATLFGLLKEFSSMTLPDVRTV 309
HISATS ASARS KE ASVTCICSAAL + L TG TL GLLKEFSS TL DVRTV
Sbjct: 166 HISATSSD*ASARSNEEKEWAASVTCICSAALCN*LVTGTTLVGLLKEFSSFTLLDVRTV 345
Query: 308 AVDPSALTLAPSPLVETVRLTVSDPKFTTFTLRKLFSASCHVIADAASELEYRELILTG* 129
A DPSAL LA SP E VRLTVSDPKFT FTLRKLF SC VIADAA E E ELI+ G*
Sbjct: 346 AFDPSALMLAWSPDTEIVRLTVSDPKFTIFTLRKLFPESCQVIADAAREPE*LELIVIG* 525
Query: 128 TMARLTLRKXVCIQ*LGVP*CCQELKTIASGFHVWSLS 15
MA L RK CIQ*LGVP CCQELKTIASGFHV SLS
Sbjct: 526 IMAPLDSRKNFCIQ*LGVPYCCQELKTIASGFHV*SLS 639
Score = 188 bits (404), Expect = 5e-047
Identities = 87/158 (55%), Positives = 108/158 (68%)
Frame = -1 / +3
Query: 489 SYLRHKLGLSQRQIEGGEGVRSQRDLHLLRGVAQLAFHRRNLVRVTEGVLVHDVARREDG 310
S+L KLGLS+R++E GEGV S+RDLHL RGV QL H +L VTE + + +A RE+
Sbjct: 165 SHLCDKLGLSKRKVERGEGVGSERDLHLFRGVMQLTCHGHDLGWVTERIFILYIAGRENS 344
Query: 309 GG*SQRVDAGPESARGDREVNGVRPEVHDLHSQEAILCILPRDRRRGQRTRVPGTDINRM 130
* QRVDA E D E +GVRPEVH+L+SQE I ILP D R RTRV GTD N M
Sbjct: 345 SV*PQRVDASLEPGHRDCEAHGVRPEVHNLYSQEVIPGILPGDSRCC*RTRVAGTDCNWM 524
Query: 129 NNGAVDSXEXXLHPVARSXIVLPGVEDNSVRVPRLVIV 16
N+G E LHPV RS ++LPGVED+S+ +PRL++V
Sbjct: 525 NHGTTRFAEKLLHPVTRSSVLLPGVEDDSIWIPRLIVV 638
Score = 145 bits (311), Expect = 3e-034
Identities = 84/156 (53%), Positives = 93/156 (59%)
Frame = +2 / -3
Query: 17 TMTKRGTRTLLSSTPGNTMXLLATGCRXFSXESTAPLFIRLISVPGTRVRWPRLRSRGRM 196
T KRG + L SSTPGN LL TGCR FS P FI+L SVP T V L S GR+
Sbjct: 637 TTIKRGIQMLSSSTPGNNTELLVTGCRSFSANLVVP*FIQLQSVPATLVL*QHLLSPGRI 458
Query: 197 QRIAS*E*RS*TSGRTPLTSRSPRADSGPASTRWDQPPPSSRLATSWTRTPSVTRTRLRR 376
I S*E*R *TSGRTP S+S S ASTRW Q SR A + SVT+ R
Sbjct: 457 PGITS*E*RL*TSGRTP*ASQSLCPGSRLASTRWGQTLLFSRPAM*RMKILSVTQPRSCP 278
Query: 377 *KAS*ATPRSRCRSRWLLTPSPPSIWRWLSPSLWRR 484
*+ S TPR+RCRSR L TPSP S R LSPSL +R
Sbjct: 277 *QVSCITPRNRCRSRSLPTPSPRSTLRLLSPSLSQR 170
Score = 123 bits (264), Expect = 9e-028
Identities = 65/133 (48%), Positives = 78/133 (58%)
Frame = +3 / -1
Query: 90 DADXFPXSQPRHCSSG*YQFPVLEFAGRVCDHVAGCRE*LPESEGRELRVGHR*PHGLHE 269
DA+ FP H SS QF +L F+ +C H+AG RE*LPES+ ELRVGHR PH L
Sbjct: 564 DAEVFPRI*WCHDSSNYNQFQLLWFSSSICYHLAGFRE*LPESKDCELRVGHREPHNLCV 385
Query: 270 RTRGQRQRAGINRHRPHVWQRHGRELLQ*PEQGCAGEKPAEQRRGADAGHAGSSLLHRLR 449
R G QRAG+ R+ HV Q G + Q*P QG A +K RRG DAGHA LL +R
Sbjct: 384 RAPG*HQRAGVKRYCSHVQQCKG*KFFQ*PNQGRARDKSVA*RRGTDAGHARCPLLLLVR 205
Query: 450 SGAG*AQACGGDM 488
A +AC D+
Sbjct: 204 PCACSVRACRRDV 166
>gb|AV930332.1|AV930332 AV930332 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp.
vulgare cDNA clone basd22b16 3', mRNA sequence
Length = 646
Score = 273 bits (590), Expect = 1e-072
Identities = 112/158 (70%), Positives = 127/158 (80%)
Frame = +1 / -2
Query: 16 DNDQTWNPDAIVFNSWQHYGTPSYWMQTXFRRVNRAIVHPVNIXXXXXXXXXXXXITWQD 195
DNDQTWNPDAIVFNSWQ YGTPSYWMQ FR + A++HP+ I ITWQD
Sbjct: 642 DNDQTWNPDAIVFNSWQQYGTPSYWMQKFFRESSGAMIHPITISSSYSGSLAASAITWQD 463
Query: 196 AENSFLRVKVVNFGSDTVNLTVSTSGLGASVNALGSTATVLTSGNVMDENSFSNPNKVAP 375
+ N+FLRVK+VNFGSDTV+LT+S SGL AS+NALGS ATVLTS NV DENSFSNP KV P
Sbjct: 462 SGNNFLRVKIVNFGSDTVSLTISVSGLQASINALGSNATVLTSSNVKDENSFSNPTKVVP 283
Query: 376 VKSQLSNAAEQMQVTLAPHSFTAFDLALAEPKLVAEI* 489
V SQL NAAEQMQVTLA HSF++FDLALA+ +LVAE+*
Sbjct: 282 VTSQLHNAAEQMQVTLAAHSFSSFDLALAQSELVAEM* 169
Score = 237 bits (512), Expect = 6e-062
Identities = 118/158 (74%), Positives = 120/158 (75%)
Frame = -2 / +2
Query: 488 HISATSLGSASARSKAVKE*GASVTCICSAALLSWLFTGATLFGLLKEFSSMTLPDVRTV 309
HISATS ASARS KE ASVTCICSAAL + L TG TL GLLKEFSS TL DVRTV
Sbjct: 170 HISATSSD*ASARSNEEKEWAASVTCICSAALCN*LVTGTTLVGLLKEFSSFTLLDVRTV 349
Query: 308 AVDPSALTLAPSPLVETVRLTVSDPKFTTFTLRKLFSASCHVIADAASELEYRELILTG* 129
A DPSAL LA SP E VRLTVSDPKFT FTLRKLF SC VIADAA E E ELI+ G*
Sbjct: 350 AFDPSALMLAWSPDTEIVRLTVSDPKFTIFTLRKLFPESCQVIADAAREPE*LELIVIG* 529
Query: 128 TMARLTLRKXVCIQ*LGVP*CCQELKTIASGFHVWSLS 15
MA L RK CIQ*LGVP CCQELKTIASGFHV SLS
Sbjct: 530 IMAPLDSRKNFCIQ*LGVPYCCQELKTIASGFHV*SLS 643
Score = 188 bits (404), Expect = 5e-047
Identities = 87/158 (55%), Positives = 108/158 (68%)
Frame = -1 / +1
Query: 489 SYLRHKLGLSQRQIEGGEGVRSQRDLHLLRGVAQLAFHRRNLVRVTEGVLVHDVARREDG 310
S+L KLGLS+R++E GEGV S+RDLHL RGV QL H +L VTE + + +A RE+
Sbjct: 169 SHLCDKLGLSKRKVERGEGVGSERDLHLFRGVMQLTCHGHDLGWVTERIFILYIAGRENS 348
Query: 309 GG*SQRVDAGPESARGDREVNGVRPEVHDLHSQEAILCILPRDRRRGQRTRVPGTDINRM 130
* QRVDA E D E +GVRPEVH+L+SQE I ILP D R RTRV GTD N M
Sbjct: 349 SV*PQRVDASLEPGHRDCEAHGVRPEVHNLYSQEVIPGILPGDSRCC*RTRVAGTDCNWM 528
Query: 129 NNGAVDSXEXXLHPVARSXIVLPGVEDNSVRVPRLVIV 16
N+G E LHPV RS ++LPGVED+S+ +PRL++V
Sbjct: 529 NHGTTRFAEKLLHPVTRSSVLLPGVEDDSIWIPRLIVV 642
Score = 145 bits (311), Expect = 3e-034
Identities = 84/156 (53%), Positives = 93/156 (59%)
Frame = +2 / -3
Query: 17 TMTKRGTRTLLSSTPGNTMXLLATGCRXFSXESTAPLFIRLISVPGTRVRWPRLRSRGRM 196
T KRG + L SSTPGN LL TGCR FS P FI+L SVP T V L S GR+
Sbjct: 641 TTIKRGIQMLSSSTPGNNTELLVTGCRSFSANLVVP*FIQLQSVPATLVL*QHLLSPGRI 462
Query: 197 QRIAS*E*RS*TSGRTPLTSRSPRADSGPASTRWDQPPPSSRLATSWTRTPSVTRTRLRR 376
I S*E*R *TSGRTP S+S S ASTRW Q SR A + SVT+ R
Sbjct: 461 PGITS*E*RL*TSGRTP*ASQSLCPGSRLASTRWGQTLLFSRPAM*RMKILSVTQPRSCP 282
Query: 377 *KAS*ATPRSRCRSRWLLTPSPPSIWRWLSPSLWRR 484
*+ S TPR+RCRSR L TPSP S R LSPSL +R
Sbjct: 281 *QVSCITPRNRCRSRSLPTPSPRSTLRLLSPSLSQR 174
Score = 123 bits (264), Expect = 9e-028
Identities = 65/133 (48%), Positives = 78/133 (58%)
Frame = +3 / -1
Query: 90 DADXFPXSQPRHCSSG*YQFPVLEFAGRVCDHVAGCRE*LPESEGRELRVGHR*PHGLHE 269
DA+ FP H SS QF +L F+ +C H+AG RE*LPES+ ELRVGHR PH L
Sbjct: 568 DAEVFPRI*WCHDSSNYNQFQLLWFSSSICYHLAGFRE*LPESKDCELRVGHREPHNLCV 389
Query: 270 RTRGQRQRAGINRHRPHVWQRHGRELLQ*PEQGCAGEKPAEQRRGADAGHAGSSLLHRLR 449
R G QRAG+ R+ HV Q G + Q*P QG A +K RRG DAGHA LL +R
Sbjct: 388 RAPG*HQRAGVKRYCSHVQQCKG*KFFQ*PNQGRARDKSVA*RRGTDAGHARCPLLLLVR 209
Query: 450 SGAG*AQACGGDM 488
A +AC D+
Sbjct: 208 PCACSVRACRRDV 170
>gb|AV934949.1|AV934949 AV934949 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal2e14 3', mRNA sequence
Length = 654
Score = 273 bits (590), Expect = 1e-072
Identities = 112/158 (70%), Positives = 127/158 (80%)
Frame = +1 / -1
Query: 16 DNDQTWNPDAIVFNSWQHYGTPSYWMQTXFRRVNRAIVHPVNIXXXXXXXXXXXXITWQD 195
DNDQTWNPDAIVFNSWQ YGTPSYWMQ FR + A++HP+ I ITWQD
Sbjct: 651 DNDQTWNPDAIVFNSWQQYGTPSYWMQKFFRESSGAMIHPITISSSYSGSLAASAITWQD 472
Query: 196 AENSFLRVKVVNFGSDTVNLTVSTSGLGASVNALGSTATVLTSGNVMDENSFSNPNKVAP 375
+ N+FLRVK+VNFGSDTV+LT+S SGL AS+NALGS ATVLTS NV DENSFSNP KV P
Sbjct: 471 SGNNFLRVKIVNFGSDTVSLTISVSGLQASINALGSNATVLTSSNVKDENSFSNPTKVVP 292
Query: 376 VKSQLSNAAEQMQVTLAPHSFTAFDLALAEPKLVAEI* 489
V SQL NAAEQMQVTLA HSF++FDLALA+ +LVAE+*
Sbjct: 291 VTSQLHNAAEQMQVTLAAHSFSSFDLALAQSELVAEM* 178
Score = 237 bits (512), Expect = 6e-062
Identities = 118/158 (74%), Positives = 120/158 (75%)
Frame = -2 / +2
Query: 488 HISATSLGSASARSKAVKE*GASVTCICSAALLSWLFTGATLFGLLKEFSSMTLPDVRTV 309
HISATS ASARS KE ASVTCICSAAL + L TG TL GLLKEFSS TL DVRTV
Sbjct: 179 HISATSSD*ASARSNEEKEWAASVTCICSAALCN*LVTGTTLVGLLKEFSSFTLLDVRTV 358
Query: 308 AVDPSALTLAPSPLVETVRLTVSDPKFTTFTLRKLFSASCHVIADAASELEYRELILTG* 129
A DPSAL LA SP E VRLTVSDPKFT FTLRKLF SC VIADAA E E ELI+ G*
Sbjct: 359 AFDPSALMLAWSPDTEIVRLTVSDPKFTIFTLRKLFPESCQVIADAAREPE*LELIVIG* 538
Query: 128 TMARLTLRKXVCIQ*LGVP*CCQELKTIASGFHVWSLS 15
MA L RK CIQ*LGVP CCQELKTIASGFHV SLS
Sbjct: 539 IMAPLDSRKNFCIQ*LGVPYCCQELKTIASGFHV*SLS 652
Score = 188 bits (404), Expect = 5e-047
Identities = 87/158 (55%), Positives = 108/158 (68%)
Frame = -1 / +1
Query: 489 SYLRHKLGLSQRQIEGGEGVRSQRDLHLLRGVAQLAFHRRNLVRVTEGVLVHDVARREDG 310
S+L KLGLS+R++E GEGV S+RDLHL RGV QL H +L VTE + + +A RE+
Sbjct: 178 SHLCDKLGLSKRKVERGEGVGSERDLHLFRGVMQLTCHGHDLGWVTERIFILYIAGRENS 357
Query: 309 GG*SQRVDAGPESARGDREVNGVRPEVHDLHSQEAILCILPRDRRRGQRTRVPGTDINRM 130
* QRVDA E D E +GVRPEVH+L+SQE I ILP D R RTRV GTD N M
Sbjct: 358 SV*PQRVDASLEPGHRDCEAHGVRPEVHNLYSQEVIPGILPGDSRCC*RTRVAGTDCNWM 537
Query: 129 NNGAVDSXEXXLHPVARSXIVLPGVEDNSVRVPRLVIV 16
N+G E LHPV RS ++LPGVED+S+ +PRL++V
Sbjct: 538 NHGTTRFAEKLLHPVTRSSVLLPGVEDDSIWIPRLIVV 651
Score = 145 bits (311), Expect = 3e-034
Identities = 84/156 (53%), Positives = 93/156 (59%)
Frame = +2 / -2
Query: 17 TMTKRGTRTLLSSTPGNTMXLLATGCRXFSXESTAPLFIRLISVPGTRVRWPRLRSRGRM 196
T KRG + L SSTPGN LL TGCR FS P FI+L SVP T V L S GR+
Sbjct: 650 TTIKRGIQMLSSSTPGNNTELLVTGCRSFSANLVVP*FIQLQSVPATLVL*QHLLSPGRI 471
Query: 197 QRIAS*E*RS*TSGRTPLTSRSPRADSGPASTRWDQPPPSSRLATSWTRTPSVTRTRLRR 376
I S*E*R *TSGRTP S+S S ASTRW Q SR A + SVT+ R
Sbjct: 470 PGITS*E*RL*TSGRTP*ASQSLCPGSRLASTRWGQTLLFSRPAM*RMKILSVTQPRSCP 291
Query: 377 *KAS*ATPRSRCRSRWLLTPSPPSIWRWLSPSLWRR 484
*+ S TPR+RCRSR L TPSP S R LSPSL +R
Sbjct: 290 *QVSCITPRNRCRSRSLPTPSPRSTLRLLSPSLSQR 183
Score = 123 bits (264), Expect = 9e-028
Identities = 65/133 (48%), Positives = 78/133 (58%)
Frame = +3 / -3
Query: 90 DADXFPXSQPRHCSSG*YQFPVLEFAGRVCDHVAGCRE*LPESEGRELRVGHR*PHGLHE 269
DA+ FP H SS QF +L F+ +C H+AG RE*LPES+ ELRVGHR PH L
Sbjct: 577 DAEVFPRI*WCHDSSNYNQFQLLWFSSSICYHLAGFRE*LPESKDCELRVGHREPHNLCV 398
Query: 270 RTRGQRQRAGINRHRPHVWQRHGRELLQ*PEQGCAGEKPAEQRRGADAGHAGSSLLHRLR 449
R G QRAG+ R+ HV Q G + Q*P QG A +K RRG DAGHA LL +R
Sbjct: 397 RAPG*HQRAGVKRYCSHVQQCKG*KFFQ*PNQGRARDKSVA*RRGTDAGHARCPLLLLVR 218
Query: 450 SGAG*AQACGGDM 488
A +AC D+
Sbjct: 217 PCACSVRACRRDV 179
>gb|BM368797.2|BM368797 EBem08_SQ004_K02_R embryo, 40 DPA, no treatment, cv Optic, EBem08
Hordeum vulgare subsp. vulgare cDNA clone
EBem08_SQ004_K02 5', mRNA sequence
Length = 479
Score = 228 bits (492), Expect = 3e-059
Identities = 90/135 (66%), Positives = 103/135 (76%)
Frame = +1 / +3
Query: 1 PLFVTDNDQTWNPDAIVFNSWQHYGTPSYWMQTXFRRVNRAIVHPVNIXXXXXXXXXXXX 180
PLF+ DND+TWNPDAIVFNSWQ YGTPSYWMQT FR + A VHP+++
Sbjct: 75 PLFINDNDRTWNPDAIVFNSWQQYGTPSYWMQTLFRESSGATVHPISLSSSCSGLLAASA 254
Query: 181 ITWQDAENSFLRVKVVNFGSDTVNLTVSTSGLGASVNALGSTATVLTSGNVMDENSFSNP 360
ITW D ENSFLRVK+VNFG D V LT+S +GL S+NALGSTATVLTSG VMDENSF+NP
Sbjct: 255 ITWHDDENSFLRVKIVNFGPDAVGLTISATGLQGSINALGSTATVLTSGGVMDENSFANP 434
Query: 361 NKVAPVKSQLSNAAE 405
NKV PV +L +AAE
Sbjct: 435 NKVVPVTVELRDAAE 479
Score = 202 bits (435), Expect = 2e-051
Identities = 97/134 (72%), Positives = 103/134 (76%)
Frame = -2 / -2
Query: 404 SAALLSWLFTGATLFGLLKEFSSMTLPDVRTVAVDPSALTLAPSPLVETVRLTVSDPKFT 225
SAA + TG TLFGL KEFSS+T PDVRTVAVDPSAL L SP+ E VR T S PKFT
Sbjct: 478 SAASRNSTVTGTTLFGLAKEFSSITPPDVRTVAVDPSALMLPWSPVAEMVRPTASGPKFT 299
Query: 224 TFTLRKLFSASCHVIADAASELEYRELILTG*TMARLTLRKXVCIQ*LGVP*CCQELKTI 45
FTLRKLFS+SCHVIADAAS+ E EL L G T+A L RK VCIQ*LGVP CCQELKTI
Sbjct: 298 IFTLRKLFSSSCHVIADAASKPEQLELRLMGWTVAPLDSRKSVCIQ*LGVPYCCQELKTI 119
Query: 44 ASGFHVWSLSVTKS 3
ASGFHV SLS KS
Sbjct: 118 ASGFHVRSLSFMKS 77
Score = 159 bits (341), Expect = 2e-038
Identities = 72/134 (53%), Positives = 93/134 (69%)
Frame = -1 / -1
Query: 405 LRGVAQLAFHRRNLVRVTEGVLVHDVARREDGGG*SQRVDAGPESARGDREVNGVRPEVH 226
LR VAQL HR NLV V+E VLVH AR E+G G S+R+DA E +R D E +G+ PE+H
Sbjct: 479 LRSVAQLDRHRHNLVWVSERVLVHYTARCENGRGGSERIDAALEPSRRDGEAHGIWPEIH 300
Query: 225 DLHSQEAILCILPRDRRRGQRTRVPGTDINRMNNGAVDSXEXXLHPVARSXIVLPGVEDN 46
+LHSQEA+L I+PRDRR Q+TR T+ + M+ E LHPV S ++LPGVED+
Sbjct: 299 NLHSQEAVLVIMPRDRRCCQQTRAA*TETDGMDRSTA*FSEKRLHPVTGSSVLLPGVEDD 120
Query: 45 SVRVPRLVIVGHEE 4
SV VPR V++ +EE
Sbjct: 119 SVWVPRAVVIVYEE 78
Score = 128 bits (274), Expect = 4e-029
Identities = 71/133 (53%), Positives = 79/133 (59%)
Frame = +2 / +1
Query: 5 SS*PTMTKRGTRTLLSSTPGNTMXLLATGCRXFSXESTAPLFIRLISVPGTRVRWPRLRS 184
SS* T RGT+TL SSTPG+ L TGCR FS I +SV V W LRS
Sbjct: 79 SS*TITTARGTQTLSSSTPGSNTELPVTGCRRFSENQAVLRSIPSVSVQAALVCWQHLRS 258
Query: 185 RGRMQRIAS*E*RS*TSGRTPLTSRSPRADSGPASTRWDQPPPSSRLATSWTRTPSVTRT 364
RG M R AS*E*R * SG+ P S S R S AS R D P P S LA WTRT S+T+T
Sbjct: 259 RGMMTRTAS*E*RL*ISGQMPWASPSRRLGSRAASMRSDPPRPFSHLAV*WTRTLSLTQT 438
Query: 365 RLRR*KAS*ATPR 403
RL R*++S AT R
Sbjct: 439 RLCR*RSSCATLR 477
Score = 117 bits (250), Expect = 8e-026
Identities = 58/127 (45%), Positives = 72/127 (56%)
Frame = +3 / +2
Query: 24 PNVEPGRYCXXXXXXXXXXXXXDADXFPXSQPRHCSSG*YQFPVLEFAGRVCDHVAGCRE 203
P+VEP RY DAD FP + + S QF +L FAG +CDHVA RE
Sbjct: 98 PHVEPRRYRLQLLAAIRNSQLLDADAFPRIKRCYGPSHQSQFKLLWFAGSICDHVA**RE 277
Query: 204 *LPESEGRELRVGHR*PHGLHERTRGQRQRAGINRHRPHVWQRHGRELLQ*PEQGCAGEK 383
LPESE E R R PH L + GQ Q A I+R R H+W+ +GREL +*P+QGCAG+
Sbjct: 278 QLPESEDCEFRARCRGPHHLGDWAPGQHQCARIHRDRSHIWRCNGRELFR*PKQGCAGDG 457
Query: 384 PAEQRRG 404
+R G
Sbjct: 458 RVARRCG 478
>gb|BI776606.2|BI776606 EBpi07_SQ001_B24_R pistil, 12 DPA, no treatment, cv Optic, EBpi07
Hordeum vulgare subsp. vulgare cDNA clone
EBpi07_SQ001_B24 5', mRNA sequence
Length = 453
Score = 210 bits (454), Expect = 6e-054
Identities = 82/146 (56%), Positives = 101/146 (69%)
Frame = +1 / +2
Query: 1 PLFVTDNDQTWNPDAIVFNSWQHYGTPSYWMQTXFRRVNRAIVHPVNIXXXXXXXXXXXX 180
PLF+ +ND+ W PDAIVFNSWQ YGTPSYWM T FR + A++HP+ +
Sbjct: 14 PLFLNENDRQWTPDAIVFNSWQQYGTPSYWMHTFFRESSGAVIHPMRLNSSYSGSLAASA 193
Query: 181 ITWQDAENSFLRVKVVNFGSDTVNLTVSTSGLGASVNALGSTATVLTSGNVMDENSFSNP 360
ITW D+E+ FLR+K+VNFGS+ VNLT+S GL A VN S TVLTS NV+DEN+F +P
Sbjct: 194 ITWGDSEDIFLRIKIVNFGSNAVNLTLSAIGLQAGVNT*RSAVTVLTSDNVLDENTFDDP 373
Query: 361 NKVAPVKSQLSNAAEQMQVTLAPHSF 438
V P +S L NAAE+MQ L PHSF
Sbjct: 374 RNVVPERSDLPNAAEEMQAMLVPHSF 451
Score = 166 bits (356), Expect = 2e-040
Identities = 87/146 (59%), Positives = 94/146 (64%)
Frame = -2 / -1
Query: 440 VKE*GASVTCICSAALLSWLFTGATLFGLLKEFSSMTLPDVRTVAVDPSALTLAPSPLVE 261
VKE*G S+ CI SAAL L +G TL G FSS TL DVRTV + LT A SP+ +
Sbjct: 453 VKE*GTSMACISSAALGRSLLSGTTLRGSSNVFSSNTLSDVRTVTAERHVLTPACSPIAD 274
Query: 260 TVRLTVSDPKFTTFTLRKLFSASCHVIADAASELEYRELILTG*TMARLTLRKXVCIQ*L 81
VR T DPKFT F LRK+ S S VIADAA+E E EL L G A L RK VCIQ*L
Sbjct: 273 KVRFTAFDPKFTIFILRKISSLSPQVIADAANEPE*LELSLIGWITAPLDSRKNVCIQ*L 94
Query: 80 GVP*CCQELKTIASGFHVWSLSVTKS 3
GVP CCQELKTIASG H S S KS
Sbjct: 93 GVPYCCQELKTIASGVHWRSFSFKKS 16
Score = 107 bits (228), Expect = 9e-023
Identities = 56/146 (38%), Positives = 82/146 (56%)
Frame = -1 / -3
Query: 438 EGVRSQRDLHLLRGVAQLAFHRRNLVRVTEGVLVHDVARREDGGG*SQRVDAGPESARGD 259
E VR++ LHL + +A N+ V E VL+ + E+G *+ R+D +S
Sbjct: 451 ERVRNKHGLHLFCSIG*VASFWHNVTWVIERVLIQHIVGCENGDS*ASRIDTSLQSDCR* 272
Query: 258 REVNGVRPEVHDLHSQEAILCILPRDRRRGQRTRVPGTDINRMNNGAVDSXEXXLHPVAR 79
EV+ + P+VH+L+ QE IL + P + R Q TRV G + +RM++ E +HPVAR
Sbjct: 271 GEVHSI*PKVHNLYPQEDILTVSPGNCRCCQ*TRVAGIESHRMDHSTT*FTEKCMHPVAR 92
Query: 78 SXIVLPGVEDNSVRVPRLVIVGHEEW 1
S I+LPGVED + P V+ EEW
Sbjct: 91 SSILLPGVEDYCIWGPLAVVFI*EEW 14
>gb|BU981962.1|BU981962 HA25B23r HA Hordeum vulgare subsp. vulgare cDNA clone HA25B23
5-PRIME, mRNA sequence
Length = 558
Score = 206 bits (445), Expect = 1e-052
Identities = 83/141 (58%), Positives = 99/141 (70%)
Frame = +1 / +1
Query: 37 PDAIVFNSWQHYGTPSYWMQTXFRRVNRAIVHPVNIXXXXXXXXXXXXITWQDAENSFLR 216
PDAIVFNSWQ YGTPSYWMQT FR + A++HP+ + ITW D E+ FLR
Sbjct: 10 PDAIVFNSWQQYGTPSYWMQTFFRESSGAVIHPMRLNSSYSGSLAASAITWGDNEDIFLR 189
Query: 217 VKVVNFGSDTVNLTVSTSGLGASVNALGSTATVLTSGNVMDENSFSNPNKVAPVKSQLSN 396
+K+VNFGS+ VNLT+S GL A VN S TVLTS NV+DEN+F +P V P +S L N
Sbjct: 190 IKIVNFGSNAVNLTLSAIGLQAGVNTSRSAVTVLTSDNVLDENTFDDPRNVVPERSDLPN 369
Query: 397 AAEQMQVTLAPHSFTAFDLAL 459
AAE+MQ L PHSFT+FDLAL
Sbjct: 370 AAEEMQAMLVPHSFTSFDLAL 432
Score = 164 bits (353), Expect = 5e-040
Identities = 85/140 (60%), Positives = 92/140 (65%)
Frame = -2 / -2
Query: 455 ARSKAVKE*GASVTCICSAALLSWLFTGATLFGLLKEFSSMTLPDVRTVAVDPSALTLAP 276
ARS VKE*G S+ CI SAAL L +G TL G FSS TL DVRTV + LT A
Sbjct: 428 ARSNEVKE*GTSMACISSAALGRSLLSGTTLRGSSNVFSSNTLSDVRTVTAERDVLTPAC 249
Query: 275 SPLVETVRLTVSDPKFTTFTLRKLFSASCHVIADAASELEYRELILTG*TMARLTLRKXV 96
SP+ + VR T DPKFT F LRK+ S S VIADAA+E E EL L G A L RK V
Sbjct: 248 SPIADKVRFTAFDPKFTIFILRKISSLSPQVIADAANEPE*LELSLIGWITAPLDSRKNV 69
Query: 95 CIQ*LGVP*CCQELKTIASG 36
CIQ*LGVP CCQELKTIASG
Sbjct: 68 CIQ*LGVPYCCQELKTIASG 9
Score = 102 bits (217), Expect = 3e-021
Identities = 55/139 (39%), Positives = 79/139 (56%)
Frame = -1 / -1
Query: 465 LSQRQIEGGEGVRSQRDLHLLRGVAQLAFHRRNLVRVTEGVLVHDVARREDGGG*SQRVD 286
L Q QI+ E VR++ LHL + + N+ V E VL+ + E+G *+ R+D
Sbjct: 438 LIQSQIK*SERVRNKHGLHLFCSIG*VTSFWHNVTWVIERVLIQHIVGCENGDS*A*RID 259
Query: 285 AGPESARGDREVNGVRPEVHDLHSQEAILCILPRDRRRGQRTRVPGTDINRMNNGAVDSX 106
+S EV+ + P+VH+L+ QE IL + P + R Q TRV G + +RM++
Sbjct: 258 TSLQSDCR*GEVHSI*PKVHNLYPQEDILIVSPGNCRCCQ*TRVAGIESHRMDHSTT*FT 79
Query: 105 EXXLHPVARSXIVLPGVED 49
E LHPVARS I+LPGVED
Sbjct: 78 EKCLHPVARSSILLPGVED 22
>gb|AV930658.1|AV930658 AV930658 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp.
vulgare cDNA clone basd24j13 3', mRNA sequence
Length = 561
Score = 204 bits (441), Expect = 4e-052
Identities = 88/133 (66%), Positives = 103/133 (77%)
Frame = +1 / -1
Query: 91 MQTXFRRVNRAIVHPVNIXXXXXXXXXXXXITWQDAENSFLRVKVVNFGSDTVNLTVSTS 270
MQ FR + A++HP+ I ITWQD+ N+FLRVK+VNFGSDTV+LT+S S
Sbjct: 558 MQKFFRESSGAMIHPITISSSYSGSLAASAITWQDSGNNFLRVKIVNFGSDTVSLTISVS 379
Query: 271 GLGASVNALGSTATVLTSGNVMDENSFSNPNKVAPVKSQLSNAAEQMQVTLAPHSFTAFD 450
GL AS+NALGS ATVLTS NV DENSFSNP KV PV SQL NAAEQMQVTLA HSF++FD
Sbjct: 378 GLQASINALGSNATVLTSSNVKDENSFSNPTKVVPVTSQLHNAAEQMQVTLAAHSFSSFD 199
Query: 451 LALAEPKLVAEI* 489
LALA+ +LVAE+*
Sbjct: 198 LALAQSELVAEM* 160
Score = 185 bits (399), Expect = 2e-046
Identities = 94/132 (71%), Positives = 96/132 (72%)
Frame = -2 / +2
Query: 488 HISATSLGSASARSKAVKE*GASVTCICSAALLSWLFTGATLFGLLKEFSSMTLPDVRTV 309
HISATS ASARS KE ASVTCICSAAL + L TG TL GLLKEFSS TL DVRTV
Sbjct: 161 HISATSSD*ASARSNEEKEWAASVTCICSAALCN*LVTGTTLVGLLKEFSSFTLLDVRTV 340
Query: 308 AVDPSALTLAPSPLVETVRLTVSDPKFTTFTLRKLFSASCHVIADAASELEYRELILTG* 129
A DPSAL LA SP E VRLTVSDPKFT FTLRKLF SC VIADAA E E ELI+ G*
Sbjct: 341 AFDPSALMLAWSPDTEIVRLTVSDPKFTIFTLRKLFPESCQVIADAAREPE*LELIVIG* 520
Query: 128 TMARLTLRKXVC 93
MA L RK C
Sbjct: 521 IMAPLDSRKNFC 556
Score = 146 bits (314), Expect = 1e-034
Identities = 72/133 (54%), Positives = 86/133 (64%)
Frame = -1 / +1
Query: 489 SYLRHKLGLSQRQIEGGEGVRSQRDLHLLRGVAQLAFHRRNLVRVTEGVLVHDVARREDG 310
S+L KLGLS+R++E GEGV S+RDLHL RGV QL H +L VTE + + +A RE+
Sbjct: 160 SHLCDKLGLSKRKVERGEGVGSERDLHLFRGVMQLTCHGHDLGWVTERIFILYIAGRENS 339
Query: 309 GG*SQRVDAGPESARGDREVNGVRPEVHDLHSQEAILCILPRDRRRGQRTRVPGTDINRM 130
* QRVDA E D E +GVRPEVH+L+SQE I ILP D R RTRV GTD N M
Sbjct: 340 SV*PQRVDASLEPGHRDCEAHGVRPEVHNLYSQEVIPGILPGDSRCC*RTRVAGTDCNWM 519
Query: 129 NNGAVDSXEXXLH 91
N+G E LH
Sbjct: 520 NHGTTRFAEKLLH 558
Score = 121 bits (258), Expect = 6e-027
Identities = 64/132 (48%), Positives = 77/132 (58%)
Frame = +3 / -3
Query: 93 ADXFPXSQPRHCSSG*YQFPVLEFAGRVCDHVAGCRE*LPESEGRELRVGHR*PHGLHER 272
A+ FP H SS QF +L F+ +C H+AG RE*LPES+ ELRVGHR PH L R
Sbjct: 556 AEVFPRI*WCHDSSNYNQFQLLWFSSSICYHLAGFRE*LPESKDCELRVGHREPHNLCVR 377
Query: 273 TRGQRQRAGINRHRPHVWQRHGRELLQ*PEQGCAGEKPAEQRRGADAGHAGSSLLHRLRS 452
G QRAG+ R+ HV Q G + Q*P QG A +K RRG DAGHA LL +R
Sbjct: 376 APG*HQRAGVKRYCSHVQQCKG*KFFQ*PNQGRARDKSVA*RRGTDAGHARCPLLLLVRP 197
Query: 453 GAG*AQACGGDM 488
A +AC D+
Sbjct: 196 CACSVRACRRDV 161
Score = 113 bits (242), Expect = 1e-024
Identities = 69/131 (52%), Positives = 77/131 (58%)
Frame = +2 / -2
Query: 92 CRXFSXESTAPLFIRLISVPGTRVRWPRLRSRGRMQRIAS*E*RS*TSGRTPLTSRSPRA 271
CR FS P FI+L SVP T V L S GR+ I S*E*R *TSGRTP S+S
Sbjct: 557 CRSFSANLVVP*FIQLQSVPATLVL*QHLLSPGRIPGITS*E*RL*TSGRTP*ASQSLCP 378
Query: 272 DSGPASTRWDQPPPSSRLATSWTRTPSVTRTRLRR*KAS*ATPRSRCRSRWLLTPSPPSI 451
S ASTRW Q SR A + SVT+ R *+ S TPR+RCRSR L TPSP S
Sbjct: 377 GSRLASTRWGQTLLFSRPAM*RMKILSVTQPRSCP*QVSCITPRNRCRSRSLPTPSPRST 198
Query: 452 WRWLSPSLWRR 484
R LSPSL +R
Sbjct: 197 LRLLSPSLSQR 165
>gb|BF631424.2|BF631424 HVSMEb0015O10f Hordeum vulgare seedling shoot EST library
HVcDNA0002 (Dehydration stress) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEb0015O10f, mRNA sequence
Length = 762
Score = 199 bits (428), Expect = 2e-050
Identities = 82/152 (53%), Positives = 102/152 (67%)
Frame = +1 / +2
Query: 10 VTDNDQTWNPDAIVFNSWQHYGTPSYWMQTXFRRVNRAIVHPVNIXXXXXXXXXXXXITW 189
V DNDQTWNPDA+VFNSWQ YGTPSYWMQ FR + A++HP+ I +TW
Sbjct: 89 VNDNDQTWNPDAVVFNSWQQYGTPSYWMQKFFRESSGAMIHPIAISSSYSGSLTASAVTW 268
Query: 190 QDAENSFLRVKVVNFGSDTVNLTVSTSGLGASVNALGSTATVLTSGNVMDENSFSNPNKV 369
QD+ N+ LRVK+ N GSDT +LT+ +GL +NALGS ATVLT + DENS +P K
Sbjct: 269 QDSGNN*LRVKIEN*GSDTESLTICVTGLQTDINALGSNATVLTCNSEEDENSLKDPTKD 448
Query: 370 APVKSQLSNAAEQMQVTLAPHSFTAFDLALAE 465
P SQ+ +A +QM VTLA HSF +L LA+
Sbjct: 449 MPGTSQVHSARKQMHVTLATHSFC*KNLRLAQ 544
Score = 167 bits (360), Expect = 5e-041
Identities = 90/151 (59%), Positives = 97/151 (64%)
Frame = -2 / -1
Query: 461 ASARSKAVKE*GASVTCICSAALLSWLFTGATLFGLLKEFSSMTLPDVRTVAVDPSALTL 282
AS R KE ASVTCIC AL + L G +L G K FSS +L V TVA DPSAL
Sbjct: 540 ASLRFF*QKEWVASVTCICFLALCT*LVPGMSLVGSFKLFSSSSLLHVSTVAFDPSALMS 361
Query: 281 APSPLVETVRLTVSDPKFTTFTLRKLFSASCHVIADAASELEYRELILTG*TMARLTLRK 102
SP+ + VRL+VSDP F+ FTL LF SC V ADA E E ELI G* MA L RK
Sbjct: 360 VWSPVTQIVRLSVSDP*FSIFTLS*LFPESCQVTADAVREPE*LELIAIG*IMAPLDSRK 181
Query: 101 XVCIQ*LGVP*CCQELKTIASGFHVWSLSVT 9
CIQ*LGVP CCQELKT ASGFHV SLS T
Sbjct: 180 NFCIQ*LGVPYCCQELKTTASGFHV*SLSFT 88
Score = 101 bits (216), Expect(2) = 3e-023
Identities = 49/94 (52%), Positives = 59/94 (62%)
Frame = -1 / -3
Query: 297 QRVDAGPESARGDREVNGVRPEVHDLHSQEAILCILPRDRRRGQRTRVPGTDINRMNNGA 118
Q VD E D E GVRP V +L+SQ I ILP D R RTRV GTD N MN+G
Sbjct: 376 QCVDVSLEPGHTDCEALGVRPLVLNLYSQLVIPGILPGDSRCC*RTRVAGTDCNWMNHGT 197
Query: 117 VDSXEXXLHPVARSXIVLPGVEDNSVRVPRLVIV 16
E LHPV RS ++LPGVED+S+ +PRL++V
Sbjct: 196 TRFAEKLLHPVTRSSVLLPGVEDDSIWIPRLIVV 95
Score = 26.3 bits (51), Expect(2) = 3e-023
Identities = 10/18 (55%), Positives = 12/18 (66%)
Frame = -1 / -3
Query: 438 EGVRSQRDLHLLRGVAQL 385
EGV S+RD+HL G L
Sbjct: 517 EGVGSERDMHLFSGAMYL 464
>gb|BI948632.1|BI948632 HVSMEl0010F06f Hordeum vulgare spike EST library HVcDNA0012
(Fusarium infected) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEl0010F06f, mRNA sequence
Length = 817
Score = 166 bits (356), Expect(2) = 3e-046
Identities = 64/100 (64%), Positives = 73/100 (73%)
Frame = +1 / +1
Query: 1 PLFVTDNDQTWNPDAIVFNSWQHYGTPSYWMQTXFRRVNRAIVHPVNIXXXXXXXXXXXX 180
PLFV DNDQTWNPDAIVFNSWQ YGTPSYWMQ FR + A++HP+ I
Sbjct: 277 PLFVNDNDQTWNPDAIVFNSWQQYGTPSYWMQKFFRESSGAMIHPITISSSYSGSLAASA 456
Query: 181 ITWQDAENSFLRVKVVNFGSDTVNLTVSTSGLGASVNALG 300
ITWQD+ N+FLRVK VNFGSDTV+LT+S SGL AS+ G
Sbjct: 457 ITWQDSGNNFLRVKDVNFGSDTVSLTISVSGLPASIKRAG 576
Score = 151 bits (325), Expect = 4e-036
Identities = 73/99 (73%), Positives = 76/99 (76%)
Frame = -2 / -3
Query: 299 PSALTLAPSPLVETVRLTVSDPKFTTFTLRKLFSASCHVIADAASELEYRELILTG*TMA 120
P+ L LA SP E VRLTVSDPKFT+FTLRKLF SC VIADAA E E ELI+ G* MA
Sbjct: 575 PARLMLAGSPDTEIVRLTVSDPKFTSFTLRKLFPESCQVIADAAREPE*LELIVIG*IMA 396
Query: 119 RLTLRKXVCIQ*LGVP*CCQELKTIASGFHVWSLSVTKS 3
L RK CIQ*LGVP CCQELKTIASGFHV SLS TKS
Sbjct: 395 PLDSRKNFCIQ*LGVPYCCQELKTIASGFHV*SLSFTKS 279
Score = 115 bits (245), Expect(2) = 4e-030
Identities = 52/95 (54%), Positives = 64/95 (67%)
Frame = -1 / -2
Query: 288 DAGPESARGDREVNGVRPEVHDLHSQEAILCILPRDRRRGQRTRVPGTDINRMNNGAVDS 109
DA E D E +GVRPEVH L+SQE I ILP D R RTRV GTD N MN+G
Sbjct: 564 DASWEPGHRDCEAHGVRPEVHILYSQEVIPGILPGDSRCC*RTRVAGTDCNWMNHGTTRF 385
Query: 108 XEXXLHPVARSXIVLPGVEDNSVRVPRLVIVGHEE 4
E LHPV RS ++LPGVED+S+ +PRL++V ++E
Sbjct: 384 AEKLLHPVTRSSVLLPGVEDDSIWIPRLIVVVYKE 280
Score = 39.6 bits (80), Expect(2) = 3e-046
Identities = 17/29 (58%), Positives = 19/29 (65%)
Frame = +1 / +2
Query: 289 NALGSTATVLTSGNVMDENSFSNPNKVAP 375
NALGS AT LT +V DEN FS P + P
Sbjct: 566 NALGSNATGLTXQHVKDENFFSTPPRACP 652
Score = 36.3 bits (73), Expect(2) = 4e-030
Identities = 18/35 (51%), Positives = 21/35 (60%)
Frame = -2 / -2
Query: 374 GATLFGLLKEFSSMTLPDVRTVAVDPSALTLAPSP 270
G L G+LK+FSS T VR VA DPSA + P
Sbjct: 651 GHALGGVLKKFSSFTCWXVRPVAFDPSAFDASWEP 547
>gb|BU971681.1|BU971681 HB19F12r BC Hordeum vulgare subsp. vulgare cDNA clone HB19F12
5-PRIME, mRNA sequence
Length = 556
Score = 185 bits (398), Expect = 3e-046
Identities = 80/103 (77%), Positives = 91/103 (88%)
Frame = +1 / +2
Query: 181 ITWQDAENSFLRVKVVNFGSDTVNLTVSTSGLGASVNALGSTATVLTSGNVMDENSFSNP 360
ITWQD+ N+FLRVK+VNFGSDTV+LT+S SGL AS+NALGS ATVLTS NV DENSFSNP
Sbjct: 62 ITWQDSGNNFLRVKIVNFGSDTVSLTISVSGLQASINALGSNATVLTSSNVKDENSFSNP 241
Query: 361 NKVAPVKSQLSNAAEQMQVTLAPHSFTAFDLALAEPKLVAEI* 489
KV PV SQL NAAEQMQVTLA HSF++FDLALA+ +LVAE+*
Sbjct: 242 TKVVPVTSQLHNAAEQMQVTLAAHSFSSFDLALAQSELVAEM* 370
Score = 165 bits (355), Expect = 3e-040
Identities = 81/107 (75%), Positives = 82/107 (76%)
Frame = -2 / -2
Query: 488 HISATSLGSASARSKAVKE*GASVTCICSAALLSWLFTGATLFGLLKEFSSMTLPDVRTV 309
HISATS ASARS KE ASVTCICSAAL + L TG TL GLLKEFSS TL DVRTV
Sbjct: 369 HISATSSD*ASARSNEEKEWAASVTCICSAALCN*LVTGTTLVGLLKEFSSFTLLDVRTV 190
Query: 308 AVDPSALTLAPSPLVETVRLTVSDPKFTTFTLRKLFSASCHVIADAA 168
A DPSAL LA SP E VRLTVSDPKFT FTLRKLF SC VIADAA
Sbjct: 189 AFDPSALMLAWSPDTEIVRLTVSDPKFTIFTLRKLFPESCQVIADAA 49
Score = 121 bits (258), Expect = 6e-027
Identities = 58/105 (55%), Positives = 71/105 (67%)
Frame = -1 / -1
Query: 489 SYLRHKLGLSQRQIEGGEGVRSQRDLHLLRGVAQLAFHRRNLVRVTEGVLVHDVARREDG 310
S+L KLGLS+R++E GEGV S+RDLHL RGV QL H +L VTE + + +A RE+
Sbjct: 370 SHLCDKLGLSKRKVERGEGVGSERDLHLFRGVMQLTCHGHDLGWVTERIFILYIAGRENS 191
Query: 309 GG*SQRVDAGPESARGDREVNGVRPEVHDLHSQEAILCILPRDRR 175
* QRVDA E D E +GVRPEVH+L+SQE I ILP D R
Sbjct: 190 SV*PQRVDASLEPGHRDCEAHGVRPEVHNLYSQEVIPGILPGDSR 56
Score = 107 bits (229), Expect = 6e-023
Identities = 54/105 (51%), Positives = 64/105 (60%)
Frame = +3 / +1
Query: 174 VCDHVAGCRE*LPESEGRELRVGHR*PHGLHERTRGQRQRAGINRHRPHVWQRHGRELLQ 353
+C H+AG RE*LPES+ ELRVGHR PH L R G QRAG+ R+ HV Q G + Q
Sbjct: 55 ICYHLAGFRE*LPESKDCELRVGHREPHNLCVRAPG*HQRAGVKRYCSHVQQCKG*KFFQ 234
Query: 354 *PEQGCAGEKPAEQRRGADAGHAGSSLLHRLRSGAG*AQACGGDM 488
*P QG A +K RRG DAGHA LL +R A +AC D+
Sbjct: 235 *PNQGRARDKSVA*RRGTDAGHARCPLLLLVRPCACSVRACRRDV 369
>gb|BF259719.2|BF259719 HVSMEf0020B07f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEf0020B07f, mRNA sequence
Length = 832
Score = 130 bits (278), Expect(2) = 2e-037
Identities = 47/79 (59%), Positives = 55/79 (69%)
Frame = +1 / +2
Query: 1 PLFVTDNDQTWNPDAIVFNSWQHYGTPSYWMQTXFRRVNRAIVHPVNIXXXXXXXXXXXX 180
PLFV DNDQTWNPDAIVFNSWQ YGTPSYWMQ FR A++HP+ I
Sbjct: 341 PLFVNDNDQTWNPDAIVFNSWQQYGTPSYWMQKFFRESRGAMIHPITISSSYSGSLATSA 520
Query: 181 ITWQDAENSFLRVKVVNFG 237
ITWQ++ N+FLR+K+ FG
Sbjct: 521 ITWQESGNNFLRIKMGTFG 577
Score = 111 bits (237), Expect = 5e-024
Identities = 54/78 (69%), Positives = 56/78 (71%)
Frame = -2 / -2
Query: 236 PKFTTFTLRKLFSASCHVIADAASELEYRELILTG*TMARLTLRKXVCIQ*LGVP*CCQE 57
PK F LRKLF SC VIA+ A E E ELI+ G* MA L RK CIQ*LGVP CCQE
Sbjct: 576 PKVPIFILRKLFPDSCQVIAEVAKEPE*LELIVIG*IMAPLDSRKNFCIQ*LGVPYCCQE 397
Query: 56 LKTIASGFHVWSLSVTKS 3
LKTIASGFHV SLS TKS
Sbjct: 396 LKTIASGFHV*SLSFTKS 343
Score = 45.5 bits (93), Expect(2) = 2e-037
Identities = 21/41 (51%), Positives = 25/41 (60%)
Frame = +1 / +2
Query: 259 VSTSGLGASVNALGSTATVLTSGNVMDENSFSNPNKVAPVK 381
+ SGL AS+NALG T L S +V EN F NP +V P K
Sbjct: 596 IFVSGLQASINALGFNPTGLKSPHVKGENFFLNPTQVCPYK 718
>gb|CA028489.1|CA028489 HZ62C12r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ62C12
5-PRIME, mRNA sequence
Length = 557
Score = 155 bits (332), Expect = 4e-037
Identities = 60/106 (56%), Positives = 72/106 (67%)
Frame = +1 / +1
Query: 1 PLFVTDNDQTWNPDAIVFNSWQHYGTPSYWMQTXFRRVNRAIVHPVNIXXXXXXXXXXXX 180
PLFV +ND+ W PDAIVFNSWQ YGTPSYWMQT FR + A++HP+ +
Sbjct: 238 PLFVNENDRQWTPDAIVFNSWQQYGTPSYWMQTFFRESSGAVIHPMRLNSSYSGSLAASA 417
Query: 181 ITWQDAENSFLRVKVVNFGSDTVNLTVSTSGLGASVNALGSTATVL 318
ITW D E+ FLR+K+VNFGS+ VNLT+S GL A VN S TVL
Sbjct: 418 ITWGDNEDIFLRIKIVNFGSNAVNLTLSAIGLQAGVNTSRSAVTVL 555
Score = 128 bits (274), Expect = 4e-029
Identities = 65/106 (61%), Positives = 70/106 (66%)
Frame = -2 / -1
Query: 320 VRTVAVDPSALTLAPSPLVETVRLTVSDPKFTTFTLRKLFSASCHVIADAASELEYRELI 141
VRTV + LT A SP+ + VR T DPKFT F LRK+ S S VIADAA+E E EL
Sbjct: 557 VRTVTAERDVLTPACSPIADKVRFTAFDPKFTIFILRKISSLSPQVIADAANEPE*LELS 378
Query: 140 LTG*TMARLTLRKXVCIQ*LGVP*CCQELKTIASGFHVWSLSVTKS 3
L G A L RK VCIQ*LGVP CCQELKTIASG H S S TKS
Sbjct: 377 LIGWITAPLDSRKNVCIQ*LGVPYCCQELKTIASGVHWRSFSFTKS 240
>gb|CA025468.1|CA025468 HZ52E03r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ52E03
5-PRIME, mRNA sequence
Length = 462
Score = 149 bits (320), Expect = 2e-035
Identities = 61/115 (53%), Positives = 77/115 (66%)
Frame = +1 / +1
Query: 115 NRAIVHPVNIXXXXXXXXXXXXITWQDAENSFLRVKVVNFGSDTVNLTVSTSGLGASVNA 294
+ A++HP+ + ITW D E+ FLR+K+VNFGS+ VNLT+S GL A VN
Sbjct: 4 HEAVIHPMRLNSSYSGSLAASAITWGDNEDIFLRIKIVNFGSNAVNLTLSAIGLQAGVNT 183
Query: 295 LGSTATVLTSGNVMDENSFSNPNKVAPVKSQLSNAAEQMQVTLAPHSFTAFDLAL 459
S TVLTS NV+DEN+F +P V P +S L NAAE+MQ L PHSFT+FDLAL
Sbjct: 184 SRSAVTVLTSDNVLDENTFDDPRNVVPERSDLPNAAEEMQAMLVPHSFTSFDLAL 348
Score = 116 bits (247), Expect = 2e-025
Identities = 61/108 (56%), Positives = 68/108 (62%)
Frame = -2 / -2
Query: 455 ARSKAVKE*GASVTCICSAALLSWLFTGATLFGLLKEFSSMTLPDVRTVAVDPSALTLAP 276
ARS VKE*G S+ CI SAAL L +G TL G FSS TL DVRTV + LT A
Sbjct: 344 ARSNEVKE*GTSMACISSAALGRSLLSGTTLRGSSNVFSSNTLSDVRTVTAERDVLTPAC 165
Query: 275 SPLVETVRLTVSDPKFTTFTLRKLFSASCHVIADAASELEYRELILTG 132
SP+ + VR T DPKFT F LRK+ S S VIADAA+E E EL L G
Sbjct: 164 SPIADKVRFTAFDPKFTIFILRKISSLSPQVIADAANEPE*LELSLIG 21
>gb|AL500477.1|AL500477 AL500477 Hordeum vulgare Barke etiolated leaves Hordeum vulgare
subsp. vulgare cDNA clone HK06M19r 3', mRNA sequence
Length = 514
Score = 146 bits (313), Expect(2) = 2e-035
Identities = 65/86 (75%), Positives = 73/86 (84%)
Frame = +1 / -3
Query: 232 FGSDTVNLTVSTSGLGASVNALGSTATVLTSGNVMDENSFSNPNKVAPVKSQLSNAAEQM 411
FGSDTV+LT+ SGL AS+NALGS ATVLTS NV DENSFSNP KV PV SQL NAAEQM
Sbjct: 479 FGSDTVSLTIXVSGLQASINALGSNATVLTSSNVKDENSFSNPTKVVPVTSQLHNAAEQM 300
Query: 412 QVTLAPHSFTAFDLALAEPKLVAEI* 489
QVTLA HSF++ DLALA+ +LVAE+*
Sbjct: 299 QVTLAAHSFSSXDLALAQSELVAEM* 222
Score = 125 bits (267), Expect(2) = 6e-029
Identities = 63/86 (73%), Positives = 64/86 (74%)
Frame = -2 / +1
Query: 488 HISATSLGSASARSKAVKE*GASVTCICSAALLSWLFTGATLFGLLKEFSSMTLPDVRTV 309
HISATS ASARS KE ASVTCICSAAL + L TG TL GLLKEFSS TL DVRTV
Sbjct: 223 HISATSSD*ASARSNEEKEWAASVTCICSAALCN*LVTGTTLVGLLKEFSSFTLLDVRTV 402
Query: 308 AVDPSALTLAPSPLVETVRLTVSDPK 231
A DPSAL LA SP VRLTVSDPK
Sbjct: 403 AFDPSALMLAWSPDTXIVRLTVSDPK 480
Score = 23.1 bits (44), Expect(2) = 2e-035
Identities = 8/10 (80%), Positives = 10/10 (100%)
Frame = +1 / -2
Query: 205 SFLRVKVVNF 234
+FLRVK+VNF
Sbjct: 507 TFLRVKIVNF 478
Score = 22.1 bits (42), Expect(2) = 6e-029
Identities = 7/11 (63%), Positives = 11/11 (100%)
Frame = -1 / +1
Query: 237 PEVHDLHSQEA 205
P+VH+L+SQE+
Sbjct: 475 PKVHNLYSQES 507
>gb|BM097298.1|BM097298 EBro01_SQ004_M09_R root, 3 week, hydroponic grown, no treatment, cv
Optic, EBro01 Hordeum vulgare subsp. vulgare cDNA clone
EBro01_SQ004_M09 5', mRNA sequence
Length = 429
Score = 138 bits (297), Expect = 3e-032
Identities = 62/81 (76%), Positives = 70/81 (86%)
Frame = +1 / +2
Query: 247 VNLTVSTSGLGASVNALGSTATVLTSGNVMDENSFSNPNKVAPVKSQLSNAAEQMQVTLA 426
V+LT+S SGL AS+NALGS ATVLTS NV DENSFSNP KV PV SQL NAAEQMQVTLA
Sbjct: 2 VSLTISVSGLQASINALGSNATVLTSSNVKDENSFSNPTKVVPVTSQLHNAAEQMQVTLA 181
Query: 427 PHSFTAFDLALAEPKLVAEI* 489
HSF++FDLALA+ +LVAE+*
Sbjct: 182 AHSFSSFDLALAQSELVAEM* 244
Score = 116 bits (247), Expect = 2e-025
Identities = 59/81 (72%), Positives = 60/81 (74%)
Frame = -2 / -1
Query: 488 HISATSLGSASARSKAVKE*GASVTCICSAALLSWLFTGATLFGLLKEFSSMTLPDVRTV 309
HISATS ASARS KE ASVTCICSAAL + L TG TL GLLKEFSS TL DVRTV
Sbjct: 243 HISATSSD*ASARSNEEKEWAASVTCICSAALCN*LVTGTTLVGLLKEFSSFTLLDVRTV 64
Query: 308 AVDPSALTLAPSPLVETVRLT 246
A DPSAL LA SP E VRLT
Sbjct: 63 AFDPSALMLAWSPDTEIVRLT 1
>gb|BE420972.1|BE420972 HWM004.E01 ITEC HWM Barley Leaf Library Hordeum vulgare subsp.
vulgare cDNA clone HWM004.E01, mRNA sequence
Length = 1149
Score = 91.8 bits (194), Expect(2) = 5e-032
Identities = 34/74 (45%), Positives = 43/74 (58%)
Frame = +1 / +1
Query: 1 PLFVTDNDQTWNPDAIVFNSWQHYGTPSYWMQTXFRRVNRAIVHPVNIXXXXXXXXXXXX 180
PLFV DND+ W+PDAIVFNSWQHYG P+YWM F+ + A HP +
Sbjct: 673 PLFVNDNDRKWSPDAIVFNSWQHYGCPNYWMLHFFKDSSGATFHPTTMQISNYDQMVASA 852
Query: 181 ITWQDAENSFLRVK 222
ITWQ ++ +K
Sbjct: 853 ITWQSPKDKSTYLK 894
Score = 66.1 bits (138), Expect(2) = 5e-032
Identities = 28/62 (45%), Positives = 43/62 (69%)
Frame = +1 / +1
Query: 199 ENSFLRVKVVNFGSDTVNLTVSTSGLGASVNALGSTATVLTSGNVMDENSFSNPNKVAPV 378
++++L+ KVVNF V+L ++ +GL + + + GST TVLT ++ENS S+P KVAPV
Sbjct: 877 KSTYLKNKVVNFRXQAVDLNITVTGLXSGIKSSGSTKTVLTFXAPVEENSSSHPQKVAPV 1056
Query: 379 KS 384
S
Sbjct: 1057 XS 1062
>gb|AJ462649.1|AJ462649 AJ462649 S00002 Hordeum vulgare subsp. vulgare cDNA clone
S0000200082D06F1, mRNA sequence
Length = 240
Score = 131 bits (280), Expect = 6e-030
Identities = 59/76 (77%), Positives = 65/76 (85%)
Frame = +1 / +2
Query: 262 STSGLGASVNALGSTATVLTSGNVMDENSFSNPNKVAPVKSQLSNAAEQMQVTLAPHSFT 441
S SGL AS+NALGS ATVLTS NV DENSFSNP KV PV SQL NAAEQMQVTLA HSF+
Sbjct: 2 SVSGLQASINALGSNATVLTSSNVKDENSFSNPTKVVPVTSQLHNAAEQMQVTLAAHSFS 181
Query: 442 AFDLALAEPKLVAEI* 489
+FDLALA+ +LVAE+*
Sbjct: 182 SFDLALAQSELVAEM* 229
Score = 108 bits (230), Expect = 5e-023
Identities = 55/76 (72%), Positives = 56/76 (73%)
Frame = -2 / -1
Query: 488 HISATSLGSASARSKAVKE*GASVTCICSAALLSWLFTGATLFGLLKEFSSMTLPDVRTV 309
HISATS ASARS KE ASVTCICSAAL + L TG TL GLLKEFSS TL DVRTV
Sbjct: 228 HISATSSD*ASARSNEEKEWAASVTCICSAALCN*LVTGTTLVGLLKEFSSFTLLDVRTV 49
Query: 308 AVDPSALTLAPSPLVE 261
A DPSAL LA SP E
Sbjct: 48 AFDPSALMLAWSPDTE 1
>gb|AL500044.1|AL500044 AL500044 Hordeum vulgare Barke etiolated leaves Hordeum vulgare
subsp. vulgare cDNA clone HK04K11r 3', mRNA sequence
Length = 499
Score = 111 bits (238), Expect(2) = 1e-028
Identities = 49/68 (72%), Positives = 55/68 (80%)
Frame = +1 / -1
Query: 220 KVVNFGSDTVNLTVSTSGLGASVNALGSTATVLTSGNVMDENSFSNPNKVAPVKSQLSNA 399
++ GSDT++ T+S SGL AS+NALGS ATVLTS NV DENSFSNP KV PV SQL NA
Sbjct: 484 RLXTSGSDTLSXTISVSGLQASINALGSNATVLTSSNVKDENSFSNPTKVVPVTSQLHNA 305
Query: 400 AEQMQVTL 423
AEQMQVTL
Sbjct: 304 AEQMQVTL 281
Score = 97.7 bits (207), Expect(2) = 1e-023
Identities = 47/64 (73%), Positives = 49/64 (76%)
Frame = -2 / +3
Query: 422 SVTCICSAALLSWLFTGATLFGLLKEFSSMTLPDVRTVAVDPSALTLAPSPLVETVRLTV 243
SVTCICSAAL + L TG TL GLLKEFSS TL DVRTVA DPSAL LA SP E V L V
Sbjct: 282 SVTCICSAALCN*LVTGTTLVGLLKEFSSFTLLDVRTVAFDPSALMLAWSPDTEIVXLKV 461
Query: 242 SDPK 231
SDP+
Sbjct: 462 SDPE 473
Score = 34.5 bits (69), Expect(2) = 1e-028
Identities = 14/20 (70%), Positives = 19/20 (95%)
Frame = +1 / -2
Query: 430 HSFTAFDLALAEPKLVAEI* 489
HSF++FDLALA+ +LVAE+*
Sbjct: 273 HSFSSFDLALAQSELVAEM* 214
Score = 31.8 bits (63), Expect(2) = 1e-023
Identities = 13/20 (65%), Positives = 17/20 (85%)
Frame = -1 / +1
Query: 489 SYLRHKLGLSQRQIEGGEGV 430
S+L KLGLS+R++E GEGV
Sbjct: 214 SHLCDKLGLSKRKVERGEGV 273
>gb|BJ464212.1|BJ464212 BJ464212 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags33f17 5', mRNA sequence
Length = 591
Score = 126 bits (269), Expect = 2e-028
Identities = 46/73 (63%), Positives = 52/73 (71%)
Frame = +1 / +1
Query: 1 PLFVTDNDQTWNPDAIVFNSWQHYGTPSYWMQTXFRRVNRAIVHPVNIXXXXXXXXXXXX 180
PLFV DNDQTWNPDAIVFNSWQ YGTPSYWMQ FR + A++HP+ I
Sbjct: 373 PLFVNDNDQTWNPDAIVFNSWQQYGTPSYWMQKFFRESSGAMIHPITISSSYSGSLAASA 552
Query: 181 ITWQDAENSFLRV 219
ITWQD+ N+FLRV
Sbjct: 553 ITWQDSGNNFLRV 591
Score = 111 bits (236), Expect = 7e-024
Identities = 54/72 (75%), Positives = 55/72 (76%)
Frame = -2 / -2
Query: 218 TLRKLFSASCHVIADAASELEYRELILTG*TMARLTLRKXVCIQ*LGVP*CCQELKTIAS 39
TLRKLF SC VIADAA E E ELI+ G* MA L RK CIQ*LGVP CCQELKTIAS
Sbjct: 590 TLRKLFPESCQVIADAAREPE*LELIVIG*IMAPLDSRKNFCIQ*LGVPYCCQELKTIAS 411
Query: 38 GFHVWSLSVTKS 3
GFHV SLS TKS
Sbjct: 410 GFHV*SLSFTKS 375
>gb|BI951143.1|BI951143 HVSMEl0024K06f Hordeum vulgare spike EST library HVcDNA0012
(Fusarium infected) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEl0024K06f, mRNA sequence
Length = 866
Score = 122 bits (261), Expect = 2e-027
Identities = 57/103 (55%), Positives = 68/103 (66%)
Frame = +1 / +2
Query: 181 ITWQDAENSFLRVKVVNFGSDTVNLTVSTSGLGASVNALGSTATVLTSGNVMDENSFSNP 360
ITWQD+ ++FLRVK+VNFGS T +LT+S G +N LG T T N ENSFSNP
Sbjct: 89 ITWQDSGDNFLRVKIVNFGSGTGSLTISGGGGXXXINXLG*NXTKKTYNNGKGENSFSNP 268
Query: 361 NKVAPVKSQLSNAAEQMQVTLAPHSFTAFDLALAEPKLVAEI* 489
K P S L N AEQMQ TL HSF+ DLALA+ +L AE+*
Sbjct: 269 TKGGPGTSXLHNGAEQMQGTLXGHSFSXVDLALAQSELXAEM* 397
Score = 107 bits (228), Expect = 9e-023
Identities = 59/117 (50%), Positives = 61/117 (52%)
Frame = -2 / -3
Query: 488 HISATSLGSASARSKAVKE*GASVTCICSAALLSWLFTGATLFGLLKEFSSMTLPDVRTV 309
HISA S ASARS KE V CICSA L L G L GLLKEFS L V V
Sbjct: 396 HISAXSSD*ASARSTXEKEWPXRVPCICSAPLCXSLVPGPPLVGLLKEFSPFPLLYVFLV 217
Query: 308 AVDPSALTLAPSPLVETVRLTVSDPKFTTFTLRKLFSASCHVIADAASELEYRELIL 138
P L P E VRL V DPKFT FTLRKL SC VI D + E E I+
Sbjct: 216 XFHPXXLMXXSPPPPEIVRLPVPDPKFTIFTLRKLSPESCQVIXDXXRDXE*XEXIV 46
>gb|BI947203.1|BI947203 HVSMEl0004D16f Hordeum vulgare spike EST library HVcDNA0012
(Fusarium infected) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEl0004D16f, mRNA sequence
Length = 845
Score = 118 bits (253), Expect(2) = 4e-027
Identities = 53/113 (46%), Positives = 68/113 (60%)
Frame = +1 / +1
Query: 121 AIVHPVNIXXXXXXXXXXXXITWQDAENSFLRVKVVNFGSDTVNLTVSTSGLGASVNALG 300
A +H + + IT D E+ F+R+ +VNFG + VNLT+S GL A VN
Sbjct: 145 AEIHAMRLTSCYSGSLPESAIT*GDNEDIFMRINIVNFGPNAVNLTLSAIGLQAGVNTSR 324
Query: 301 STATVLTSGNVMDENSFSNPNKVAPVKSQLSNAAEQMQVTLAPHSFTAFDLAL 459
S TV+T NV+DEN+F +P V P S L NA E+MQ L PHSFT+FDLAL
Sbjct: 325 SAVTVVTFDNVLDENTFDDPPNVVPE*SDLPNAGEEMQAMLVPHSFTSFDLAL 483
Score = 22.6 bits (43), Expect(2) = 4e-027
Identities = 9/19 (47%), Positives = 11/19 (57%)
Frame = +1 / +1
Query: 1 PLFVTDNDQTWNPDAIVFN 57
PLF +N W P A+V N
Sbjct: 22 PLFDDENY*YWTPYALVLN 78
>gb|BF267850.2|BF267850 HV_CEa0019B08f Hordeum vulgare seedling green leaf EST library
HVcDNA0004 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEa0019B08f, mRNA sequence
Length = 769
Score = 84.0 bits (177), Expect(3) = 6e-027
Identities = 32/71 (45%), Positives = 39/71 (54%)
Frame = +1 / +2
Query: 1 PLFVTDNDQTWNPDAIVFNSWQHYGTPSYWMQTXFRRVNRAIVHPVNIXXXXXXXXXXXX 180
PLF DQTWN DAI N WQ YGTPS WM+ R + A++HP+ I
Sbjct: 341 PLFGDHIDQTWNTDAIRLNYWQRYGTPSTWMRRFLRESSGAMIHPITISFSYSGAVAAFA 520
Query: 181 ITWQDAENSFL 213
ITW D+ N+ L
Sbjct: 521 ITWHDSGNNLL 553
Score = 48.3 bits (99), Expect(3) = 6e-027
Identities = 22/34 (64%), Positives = 27/34 (79%)
Frame = +1 / +1
Query: 220 KVVNFGSDTVNLTVSTSGLGASVNALGSTATVLT 321
K+ NF S TV+LTVS GL A+++ALGS ATVLT
Sbjct: 559 KIGNFESGTVSLTVSACGLQATISALGSHATVLT 660
Score = 26.3 bits (51), Expect(3) = 6e-027
Identities = 12/26 (46%), Positives = 14/26 (53%)
Frame = +1 / +3
Query: 337 DENSFSNPNKVAPVKSQLSNAAEQMQ 414
DEN + KV P SQL N E M+
Sbjct: 675 DENFLRSQPKVGPWTSQLHNFGEAME 752
>gb|AV836811.1|AV836811 AV836811 K. Sato unpublished cDNA library: Hordeum vulgare subsp.
vulgare seedling leaves second leaf stage Hordeum
vulgare subsp. vulgare cDNA clone basd3o13, mRNA
sequence
Length = 556
Score = 108 bits (231), Expect(2) = 1e-024
Identities = 42/86 (48%), Positives = 64/86 (74%)
Frame = +1 / -1
Query: 202 NSFLRVKVVNFGSDTVNLTVSTSGLGASVNALGSTATVLTSGNVMDENSFSNPNKVAPVK 381
N++L++KV+NFG+ V+L++S +GL + GS TVLTSG++ DENSF P+KV PV+
Sbjct: 451 NAYLKIKVLNFGNKAVDLSISITGLENGIQTFGSIKTVLTSGSLWDENSFQQPDKVVPVE 272
Query: 382 SQLSNAAEQMQVTLAPHSFTAFDLAL 459
S ++NA E+M + L P++ T+FDL L
Sbjct: 271 SPITNAREEMSLVLDPYALTSFDLLL 194
Score = 24.0 bits (46), Expect(2) = 1e-024
Identities = 10/40 (25%), Positives = 18/40 (45%)
Frame = +1 / -1
Query: 106 RRVNRAIVHPVNIXXXXXXXXXXXXITWQDAENSFLRVKV 225
R + A +HP I ITWQ++++ +K+
Sbjct: 553 RTQSGAALHPSTIQVSNYNQLVASAITWQNSKDGNAYLKI 434
>gb|BE437755.1|BE437755 SFR007.B08F990617 ITEC SFR Barley Leaf Epidermis Library Hordeum
vulgare subsp. vulgare cDNA clone SF, mRNA sequence
Length = 522
Score = 108 bits (231), Expect = 3e-023
Identities = 42/86 (48%), Positives = 64/86 (74%)
Frame = +1 / +1
Query: 202 NSFLRVKVVNFGSDTVNLTVSTSGLGASVNALGSTATVLTSGNVMDENSFSNPNKVAPVK 381
N++L++KV+NFG+ V+L++S +GL + GS TVLTSG++ DENSF P+KV PV+
Sbjct: 58 NAYLKIKVLNFGNKAVDLSISITGLENGIQTFGSIKTVLTSGSLWDENSFQQPDKVVPVE 237
Query: 382 SQLSNAAEQMQVTLAPHSFTAFDLAL 459
S ++NA E+M + L P++ T+FDL L
Sbjct: 238 SPITNAREEMSLVLDPYALTSFDLLL 315
>gb|BU988298.1|BU988298 HF17D19r HF Hordeum vulgare subsp. vulgare cDNA clone HF17D19
5-PRIME, mRNA sequence
Length = 638
Score = 104 bits (222), Expect = 6e-022
Identities = 38/62 (61%), Positives = 42/62 (67%)
Frame = +1 / +1
Query: 1 PLFVTDNDQTWNPDAIVFNSWQHYGTPSYWMQTXFRRVNRAIVHPVNIXXXXXXXXXXXX 180
PLFV DNDQTWNPDAIVFNSWQ YGTPSYWMQ FR + A++HP+ I
Sbjct: 451 PLFVNDNDQTWNPDAIVFNSWQQYGTPSYWMQKFFRESSGAMIHPITISSSYSGSLAASA 630
Query: 181 IT 186
IT
Sbjct: 631 IT 636
Database: Hordeum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:16 PM
Number of letters in database: 175,134,539
Number of sequences in database: 312,970
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 424,519,962
Number of Sequences: 312970
Number of extensions: 7456019
Number of successful extensions: 107828
Number of sequences better than 1.0e-020: 40
length of database: 58,378,179
effective HSP length: 52
effective length of database: 42,103,739
effective search space used: 8968096407
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)