TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2161285.2.1
(780 letters)
Database: Hordeum_nucl_with_EST.fasta
312,970 sequences; 175,134,539 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BJ447915.1|BJ447915 BJ447915 K. Sato unpublished cDNA li... 351 3e-096
gb|BM817330.1|BM817330 HC111G07_T3.ab1 HC Hordeum vulgare s... 350 5e-096
gb|BJ455660.1|BJ455660 BJ455660 K. Sato unpublished cDNA li... 330 6e-090
gb|BJ466672.1|BJ466672 BJ466672 K. Sato unpublished cDNA li... 318 3e-086
gb|AV917599.1|AV917599 AV917599 K. Sato unpublished cDNA li... 287 5e-077
gb|AV927973.1|AV927973 AV927973 K. Sato unpublished cDNA li... 287 5e-077
gb|AV930332.1|AV930332 AV930332 K. Sato unpublished cDNA li... 287 5e-077
gb|AV934949.1|AV934949 AV934949 K. Sato unpublished cDNA li... 287 5e-077
gb|BM368797.2|BM368797 EBem08_SQ004_K02_R embryo, 40 DPA, n... 276 8e-074
gb|BI948632.1|BI948632 HVSMEl0010F06f Hordeum vulgare spike... 234 1e-066
gb|BI776606.2|BI776606 EBpi07_SQ001_B24_R pistil, 12 DPA, n... 227 4e-059
gb|BF259719.2|BF259719 HVSMEf0020B07f Hordeum vulgare seedl... 200 2e-058
gb|AV930658.1|AV930658 AV930658 K. Sato unpublished cDNA li... 216 1e-055
gb|BU981962.1|BU981962 HA25B23r HA Hordeum vulgare subsp. v... 214 6e-055
gb|BF631424.2|BF631424 HVSMEb0015O10f Hordeum vulgare seedl... 213 1e-054
gb|CA028489.1|CA028489 HZ62C12r HZ Hordeum vulgare subsp. v... 199 2e-050
gb|BJ464212.1|BJ464212 BJ464212 K. Sato unpublished cDNA li... 195 2e-049
gb|BE420972.1|BE420972 HWM004.E01 ITEC HWM Barley Leaf Libr... 143 4e-047
gb|BU971681.1|BU971681 HB19F12r BC Hordeum vulgare subsp. v... 183 8e-046
gb|BU988298.1|BU988298 HF17D19r HF Hordeum vulgare subsp. v... 174 4e-043
gb|AV925177.1|AV925177 AV925177 K. Sato unpublished cDNA li... 165 3e-040
gb|BF267850.2|BF267850 HV_CEa0019B08f Hordeum vulgare seedl... 146 3e-039
gb|CA024671.1|CA024671 HZ49P14r HZ Hordeum vulgare subsp. v... 152 2e-036
gb|AL500477.1|AL500477 AL500477 Hordeum vulgare Barke etiol... 144 5e-035
gb|CA028812.1|CA028812 HZ63F05r HZ Hordeum vulgare subsp. v... 147 8e-035
gb|CA025468.1|CA025468 HZ52E03r HZ Hordeum vulgare subsp. v... 145 2e-034
gb|BI947203.1|BI947203 HVSMEl0004D16f Hordeum vulgare spike... 126 2e-033
gb|BM097298.1|BM097298 EBro01_SQ004_M09_R root, 3 week, hyd... 140 1e-032
gb|AJ462649.1|AJ462649 AJ462649 S00002 Hordeum vulgare subs... 131 6e-030
gb|AL500044.1|AL500044 AL500044 Hordeum vulgare Barke etiol... 110 3e-028
gb|BI951143.1|BI951143 HVSMEl0024K06f Hordeum vulgare spike... 124 5e-028
gb|AV912856.1|AV912856 AV912856 K. Sato unpublished cDNA li... 122 2e-027
gb|AV836811.1|AV836811 AV836811 K. Sato unpublished cDNA li... 107 3e-026
gb|BE437755.1|BE437755 SFR007.B08F990617 ITEC SFR Barley Le... 107 6e-023
>gb|BJ447915.1|BJ447915 BJ447915 K. Sato unpublished cDNA library, cv. Akashinriki
vegetative stage leaves Hordeum vulgare subsp. vulgare
cDNA clone baak17l17 5', mRNA sequence
Length = 712
Score = 351 bits (760), Expect = 3e-096
Identities = 149/201 (74%), Positives = 161/201 (80%)
Frame = -3 / +1
Query: 778 AVWRSDAGRGXXXXXXXXXXXLTGLEKNSDIVQMASYAPLFVNDNDQTWNPDAIVFNSWQ 599
AVWR+DAGRG LTGLEKNSDIV MASYAPLFVNDNDQTWNPDAIVFNSWQ
Sbjct: 34 AVWRTDAGRGSLLGSLAEAAFLTGLEKNSDIVHMASYAPLFVNDNDQTWNPDAIVFNSWQ 213
Query: 598 HYGTPSYWMQTIFRESSGAMIHPVNIXXXXXXXXXXXAITWQDAENSFLRVKVVNFGSDP 419
YGTPSYWMQ FRESSGAMIHP+ I AITWQD+ N+FLRVK+VNFGSD
Sbjct: 214 QYGTPSYWMQKFFRESSGAMIHPITISSSYSGSLAASAITWQDSGNNFLRVKIVNFGSDT 393
Query: 418 VSLTVSTSGLGASVNALGSTATVLTSGNVMDENSFSNPNKVAPVKSQLSNAAEQMQVTLA 239
VSLT+S SGL AS+NALGS ATVLTS NV DENSFSNP KV PV SQL NAAEQMQVTLA
Sbjct: 394 VSLTISVSGLQASINALGSNATVLTSSNVKDENSFSNPTKVVPVTSQLHNAAEQMQVTLA 573
Query: 238 PHSFTAFDLALAEPKLVAEI* 176
HSF++FDLALA+ +LVAE+*
Sbjct: 574 AHSFSSFDLALAQSELVAEM* 636
Score = 322 bits (697), Expect = 2e-087
Identities = 158/201 (78%), Positives = 162/201 (80%)
Frame = +3 / -3
Query: 177 HISATSLGSASARSKAVKE*GASVTCICSAALLSWLFTGATLFGLLKEFSSMTLPDVRTV 356
HISATS ASARS KE ASVTCICSAAL + L TG TL GLLKEFSS TL DVRTV
Sbjct: 635 HISATSSD*ASARSNEEKEWAASVTCICSAALCN*LVTGTTLVGLLKEFSSFTLLDVRTV 456
Query: 357 AVDPSALTLAPSPLVETVRLTGSDPKFTTFTLRKLFSASCHVIADAASELEYRELILTGW 536
A DPSAL LA SP E VRLT SDPKFT FTLRKLF SC VIADAA E E ELI+ G
Sbjct: 455 AFDPSALMLAWSPDTEIVRLTVSDPKFTIFTLRKLFPESCQVIADAAREPE*LELIVIG* 276
Query: 537 IMAPLDSRKIVCIQ*LGVP*CCQELKTIASGFHVWSLSFTKSGA*LAI*TISLFFSRPVR 716
IMAPLDSRK CIQ*LGVP CCQELKTIASGFHV SLSFTKSGA*LAI*TISLFFS PVR
Sbjct: 275 IMAPLDSRKNFCIQ*LGVPYCCQELKTIASGFHV*SLSFTKSGA*LAI*TISLFFSSPVR 96
Query: 717 KAASANEARRLPLPASLLQTA 779
KAASA+E RRLPLPAS+L TA
Sbjct: 95 KAASASEPRRLPLPASVLHTA 33
Score = 259 bits (560), Expect = 1e-068
Identities = 116/199 (58%), Positives = 145/199 (72%)
Frame = +2 / -2
Query: 176 SYLRHKLGLSQRQIEGGEGVRSQRDLHLLRGVAQLAFHRRNLVRVTEGVLVHDVARREDG 355
S+L KLGLS+R++E GEGV S+RDLHL RGV QL H +L VTE + + +A RE+
Sbjct: 636 SHLCDKLGLSKRKVERGEGVGSERDLHLFRGVMQLTCHGHDLGWVTERIFILYIAGRENS 457
Query: 356 GG*SQRVDAGPEPARGDREANGVRPEVHDLHSQEAILCILPRDRRRGQRTRVPGTDINRM 535
* QRVDA EP D EA+GVRPEVH+L+SQE I ILP D R RTRV GTD N M
Sbjct: 456 SV*PQRVDASLEPGHRDCEAHGVRPEVHNLYSQEVIPGILPGDSRCC*RTRVAGTDCNWM 277
Query: 536 DHGAA*LAENRLHPVARSSIVLPGVEDDSVRVPRLVIVVHEEWCVTCHLNNITVLLQTSE 715
+HG AE LHPV RSS++LPGVEDDS+ +PRL++VV++E C+TCH+NNITVLLQ S+
Sbjct: 276 NHGTTRFAEKLLHPVTRSSVLLPGVEDDSIWIPRLIVVVYKERCITCHMNNITVLLQPSK 97
Query: 716 ESSFSQRSKKTASTRVTSP 772
E S Q +KK +ST ++SP
Sbjct: 96 EGSLCQ*TKKASSTCISSP 40
Score = 206 bits (444), Expect = 1e-052
Identities = 106/199 (53%), Positives = 126/199 (63%)
Frame = -2 / +3
Query: 773 LEK*RG*RQSSCFVG*SCFPHWSGEEQ*YCSDGKLRTTLRERQ*PNVEPGRYRLQLLAAL 594
+E * *R+ S F G C P+W+GEEQ*YCS GKL T L +RQ NVE YRLQLLA +
Sbjct: 39 MEN*CR*RKPSWFTGRGCLPYWAGEEQ*YCSYGKLCTALCKRQRSNVESRCYRLQLLATI 218
Query: 593 WNS*LLDADDFPRVKRRHDPSG*YQFPVLEFAGRVCDHVAGCRE*LPESEGRELRVGPR* 414
NS*LLDA+ FPR+ HD S QF +L F+ +C H+AG RE*LPES+ ELRVG R
Sbjct: 219 RNS*LLDAEVFPRI*WCHDSSNYNQFQLLWFSSSICYHLAGFRE*LPESKDCELRVGHRE 398
Query: 413 PHGLHERARGQRQRAGINRHRPHVWQRHGRELLQ*PEQGCAGEKPAEQRRGADAGHAGSS 234
PH L RA G QRAG+ R+ HV Q G + Q*P QG A +K RRG DAGHA
Sbjct: 399 PHNLCVRAPG*HQRAGVKRYCSHVQQCKG*KFFQ*PNQGRARDKSVA*RRGTDAGHARCP 578
Query: 233 LLHRLRSGAG*AQACGGDM 177
LL +R A +AC D+
Sbjct: 579 LLLLVRPCACSVRACRRDV 635
Score = 179 bits (385), Expect = 2e-044
Identities = 100/172 (58%), Positives = 111/172 (64%)
Frame = -1 / +2
Query: 696 TVILFRWQVTHHSS*TTMTKRGTRTLSSSTPGSTMELLATGCRRFSASQAAP*SIRLISV 517
TVILF WQV H S *TT KRG + LSSSTPG+ ELL TGCR FSA+ P* I+L SV
Sbjct: 116 TVILFIWQVMHRSL*TTTIKRGIQMLSSSTPGNNTELLVTGCRSFSANLVVP*FIQLQSV 295
Query: 516 PGTRVRWPRLRSRGRMQRIAS*E*RS*TSGRTPLASRSPRAGSGPASTRWDQPPPSSRLA 337
P T V L S GR+ I S*E*R *TSGRTP AS+S GS ASTRW Q SR A
Sbjct: 296 PATLVL*QHLLSPGRIPGITS*E*RL*TSGRTP*ASQSLCPGSRLASTRWGQTLLFSRPA 475
Query: 336 TSWTRTPSVTRTRLRR*KAS*ATPRSRCRSRWLLTPSPPSIWRWLSPSLWRR 181
+ SVT+ R *+ S TPR+RCRSR L TPSP S R LSPSL +R
Sbjct: 476 M*RMKILSVTQPRSCP*QVSCITPRNRCRSRSLPTPSPRSTLRLLSPSLSQR 631
>gb|BM817330.1|BM817330 HC111G07_T3.ab1 HC Hordeum vulgare subsp. vulgare cDNA clone
HC111G07_T3.ab1 similar to (AC011708) putative
alpha-L-arabinofuranosidase [Arabidopsis thaliana], mRNA
sequence
Length = 924
Score = 350 bits (759), Expect = 5e-096
Identities = 149/201 (74%), Positives = 160/201 (79%)
Frame = -3 / +3
Query: 778 AVWRSDAGRGXXXXXXXXXXXLTGLEKNSDIVQMASYAPLFVNDNDQTWNPDAIVFNSWQ 599
AVWR+DAGRG LTGLEKNSDIV MASYAPLFVNDNDQTWNPDAIVFNSWQ
Sbjct: 180 AVWRTDAGRGSLIGSLAEAAFLTGLEKNSDIVHMASYAPLFVNDNDQTWNPDAIVFNSWQ 359
Query: 598 HYGTPSYWMQTIFRESSGAMIHPVNIXXXXXXXXXXXAITWQDAENSFLRVKVVNFGSDP 419
YGTPSYWMQ FRESSGAMIHP+ I AITWQD+ N+FLRVK+VNFGSD
Sbjct: 360 QYGTPSYWMQKFFRESSGAMIHPITISSSYSGSLAASAITWQDSGNNFLRVKIVNFGSDT 539
Query: 418 VSLTVSTSGLGASVNALGSTATVLTSGNVMDENSFSNPNKVAPVKSQLSNAAEQMQVTLA 239
VSLT+S SGL AS+NALGS ATVLTS NV DENSFSNP KV PV SQL NAAEQMQVTLA
Sbjct: 540 VSLTISVSGLQASINALGSNATVLTSSNVKDENSFSNPTKVVPVTSQLHNAAEQMQVTLA 719
Query: 238 PHSFTAFDLALAEPKLVAEI* 176
HSF +FDLALA+ +LVAE+*
Sbjct: 720 AHSFXSFDLALAQSELVAEM* 782
Score = 319 bits (690), Expect = 2e-086
Identities = 157/201 (78%), Positives = 161/201 (80%)
Frame = +3 / -3
Query: 177 HISATSLGSASARSKAVKE*GASVTCICSAALLSWLFTGATLFGLLKEFSSMTLPDVRTV 356
HISATS ASARS KE ASVTCICSAAL + L TG TL GLLKEFSS TL DVRTV
Sbjct: 781 HISATSSD*ASARSNEXKEWAASVTCICSAALCN*LVTGTTLVGLLKEFSSFTLLDVRTV 602
Query: 357 AVDPSALTLAPSPLVETVRLTGSDPKFTTFTLRKLFSASCHVIADAASELEYRELILTGW 536
A DPSAL LA SP E VRLT SDPKFT FTLRKLF SC VIADAA E E ELI+ G
Sbjct: 601 AFDPSALMLAWSPDTEIVRLTVSDPKFTIFTLRKLFPESCQVIADAAREPE*LELIVIG* 422
Query: 537 IMAPLDSRKIVCIQ*LGVP*CCQELKTIASGFHVWSLSFTKSGA*LAI*TISLFFSRPVR 716
IMAPLDSRK CIQ*LGVP CCQELKTIASGFHV SLSFTKSGA*LAI*TISLFFS PVR
Sbjct: 421 IMAPLDSRKNFCIQ*LGVPYCCQELKTIASGFHV*SLSFTKSGA*LAI*TISLFFSSPVR 242
Query: 717 KAASANEARRLPLPASLLQTA 779
KAASA+E RLPLPAS+L TA
Sbjct: 241 KAASASEPIRLPLPASVLHTA 179
Score = 253 bits (548), Expect = 6e-067
Identities = 114/199 (57%), Positives = 143/199 (71%)
Frame = +2 / -2
Query: 176 SYLRHKLGLSQRQIEGGEGVRSQRDLHLLRGVAQLAFHRRNLVRVTEGVLVHDVARREDG 355
S+L KLGLS+R++E EGV S+RDLHL RGV QL H +L VTE + + +A RE+
Sbjct: 782 SHLCDKLGLSKRKVERXEGVGSERDLHLFRGVMQLTCHGHDLGWVTERIFILYIAGRENS 603
Query: 356 GG*SQRVDAGPEPARGDREANGVRPEVHDLHSQEAILCILPRDRRRGQRTRVPGTDINRM 535
* QRVDA EP D EA+GVRPEVH+L+SQE I ILP D R RTRV GTD N M
Sbjct: 602 SV*PQRVDASLEPGHRDCEAHGVRPEVHNLYSQEVIPGILPGDSRCC*RTRVAGTDCNWM 423
Query: 536 DHGAA*LAENRLHPVARSSIVLPGVEDDSVRVPRLVIVVHEEWCVTCHLNNITVLLQTSE 715
+HG AE LHPV RSS++LPGVEDDS+ +PRL++VV++E C+TCH+NNITVLLQ S+
Sbjct: 422 NHGTTRFAEKLLHPVTRSSVLLPGVEDDSIWIPRLIVVVYKERCITCHMNNITVLLQPSK 243
Query: 716 ESSFSQRSKKTASTRVTSP 772
E S Q + K +ST ++SP
Sbjct: 242 EGSLCQ*TNKASSTCISSP 186
Score = 203 bits (438), Expect = 9e-052
Identities = 105/199 (52%), Positives = 125/199 (62%)
Frame = -2 / +2
Query: 773 LEK*RG*RQSSCFVG*SCFPHWSGEEQ*YCSDGKLRTTLRERQ*PNVEPGRYRLQLLAAL 594
+E * *R+ F G C P+W+GEEQ*YCS GKL T L +RQ NVE YRLQLLA +
Sbjct: 185 MEN*CR*RKPYWFTGRGCLPYWAGEEQ*YCSYGKLCTALCKRQRSNVESRCYRLQLLATI 364
Query: 593 WNS*LLDADDFPRVKRRHDPSG*YQFPVLEFAGRVCDHVAGCRE*LPESEGRELRVGPR* 414
NS*LLDA+ FPR+ HD S QF +L F+ +C H+AG RE*LPES+ ELRVG R
Sbjct: 365 RNS*LLDAEVFPRI*WCHDSSNYNQFQLLWFSSSICYHLAGFRE*LPESKDCELRVGHRE 544
Query: 413 PHGLHERARGQRQRAGINRHRPHVWQRHGRELLQ*PEQGCAGEKPAEQRRGADAGHAGSS 234
PH L RA G QRAG+ R+ HV Q G + Q*P QG A +K RRG DAGHA
Sbjct: 545 PHNLCVRAPG*HQRAGVKRYCSHVQQCKG*KFFQ*PNQGRARDKSVA*RRGTDAGHARCP 724
Query: 233 LLHRLRSGAG*AQACGGDM 177
LL +R A +AC D+
Sbjct: 725 LLLLVRPCACSVRACRRDV 781
Score = 175 bits (376), Expect = 3e-043
Identities = 99/172 (57%), Positives = 110/172 (63%)
Frame = -1 / +1
Query: 696 TVILFRWQVTHHSS*TTMTKRGTRTLSSSTPGSTMELLATGCRRFSASQAAP*SIRLISV 517
TVILF WQV H S *TT KRG + LSSSTPG+ ELL TGCR FSA+ P* I+L SV
Sbjct: 262 TVILFIWQVMHRSL*TTTIKRGIQMLSSSTPGNNTELLVTGCRSFSANLVVP*FIQLQSV 441
Query: 516 PGTRVRWPRLRSRGRMQRIAS*E*RS*TSGRTPLASRSPRAGSGPASTRWDQPPPSSRLA 337
P T V L S GR+ I S*E*R *TSGRTP AS+S GS ASTRW Q SR A
Sbjct: 442 PATLVL*QHLLSPGRIPGITS*E*RL*TSGRTP*ASQSLCPGSRLASTRWGQTLLFSRPA 621
Query: 336 TSWTRTPSVTRTRLRR*KAS*ATPRSRCRSRWLLTPSPPSIWRWLSPSLWRR 181
+ SVT+ R *+ S TPR+RCRSR L TPS S R LSPSL +R
Sbjct: 622 M*RMKILSVTQPRSCP*QVSCITPRNRCRSRSLPTPSXRSTLRLLSPSLSQR 777
>gb|BJ455660.1|BJ455660 BJ455660 K. Sato unpublished cDNA library, cv. Akashinriki
vegetative stage leaves Hordeum vulgare subsp. vulgare
cDNA clone baak17l17 3', mRNA sequence
Length = 704
Score = 330 bits (715), Expect = 6e-090
Identities = 139/179 (77%), Positives = 150/179 (83%)
Frame = -3 / -3
Query: 712 TGLEKNSDIVQMASYAPLFVNDNDQTWNPDAIVFNSWQHYGTPSYWMQTIFRESSGAMIH 533
TGLEKNSDIV MASYAPLFVNDNDQTWNPDAIVFNSWQ YGTPSYWMQ FRESSGAMIH
Sbjct: 696 TGLEKNSDIVHMASYAPLFVNDNDQTWNPDAIVFNSWQQYGTPSYWMQKFFRESSGAMIH 517
Query: 532 PVNIXXXXXXXXXXXAITWQDAENSFLRVKVVNFGSDPVSLTVSTSGLGASVNALGSTAT 353
P+ I AITWQD+ N+FLRVK+VNFGSD VSLT+S SGL AS+NALGS AT
Sbjct: 516 PITISSSYSGSLAASAITWQDSGNNFLRVKIVNFGSDTVSLTISVSGLQASINALGSNAT 337
Query: 352 VLTSGNVMDENSFSNPNKVAPVKSQLSNAAEQMQVTLAPHSFTAFDLALAEPKLVAEI* 176
VLTS NV DENSFSNP KV PV SQL NAAEQMQVTLA HSF++FDLALA+ +LVAE+*
Sbjct: 336 VLTSSNVKDENSFSNPTKVVPVTSQLHNAAEQMQVTLAAHSFSSFDLALAQSELVAEM* 160
Score = 287 bits (622), Expect = 4e-077
Identities = 142/181 (78%), Positives = 144/181 (79%)
Frame = +3 / +2
Query: 177 HISATSLGSASARSKAVKE*GASVTCICSAALLSWLFTGATLFGLLKEFSSMTLPDVRTV 356
HISATS ASARS KE ASVTCICSAAL + L TG TL GLLKEFSS TL DVRTV
Sbjct: 161 HISATSSD*ASARSNEEKEWAASVTCICSAALCN*LVTGTTLVGLLKEFSSFTLLDVRTV 340
Query: 357 AVDPSALTLAPSPLVETVRLTGSDPKFTTFTLRKLFSASCHVIADAASELEYRELILTGW 536
A DPSAL LA SP E VRLT SDPKFT FTLRKLF SC VIADAA E E ELI+ G
Sbjct: 341 AFDPSALMLAWSPDTEIVRLTVSDPKFTIFTLRKLFPESCQVIADAAREPE*LELIVIG* 520
Query: 537 IMAPLDSRKIVCIQ*LGVP*CCQELKTIASGFHVWSLSFTKSGA*LAI*TISLFFSRPVR 716
IMAPLDSRK CIQ*LGVP CCQELKTIASGFHV SLSFTKSGA*LAI*TISLFFS PVR
Sbjct: 521 IMAPLDSRKNFCIQ*LGVPYCCQELKTIASGFHV*SLSFTKSGA*LAI*TISLFFSSPVR 700
Query: 717 K 719
K
Sbjct: 701 K 703
Score = 242 bits (523), Expect = 2e-063
Identities = 108/181 (59%), Positives = 133/181 (73%)
Frame = +2 / +1
Query: 176 SYLRHKLGLSQRQIEGGEGVRSQRDLHLLRGVAQLAFHRRNLVRVTEGVLVHDVARREDG 355
S+L KLGLS+R++E GEGV S+RDLHL RGV QL H +L VTE + + +A RE+
Sbjct: 160 SHLCDKLGLSKRKVERGEGVGSERDLHLFRGVMQLTCHGHDLGWVTERIFILYIAGRENS 339
Query: 356 GG*SQRVDAGPEPARGDREANGVRPEVHDLHSQEAILCILPRDRRRGQRTRVPGTDINRM 535
* QRVDA EP D EA+GVRPEVH+L+SQE I ILP D R RTRV GTD N M
Sbjct: 340 SV*PQRVDASLEPGHRDCEAHGVRPEVHNLYSQEVIPGILPGDSRCC*RTRVAGTDCNWM 519
Query: 536 DHGAA*LAENRLHPVARSSIVLPGVEDDSVRVPRLVIVVHEEWCVTCHLNNITVLLQTSE 715
+HG AE LHPV RSS++LPGVEDDS+ +PRL++VV++E C+TCH+NNITVLLQ S+
Sbjct: 520 NHGTTRFAEKLLHPVTRSSVLLPGVEDDSIWIPRLIVVVYKERCITCHMNNITVLLQPSK 699
Query: 716 E 718
E
Sbjct: 700 E 702
Score = 193 bits (416), Expect = 1e-048
Identities = 98/180 (54%), Positives = 116/180 (64%)
Frame = -2 / -2
Query: 716 PHWSGEEQ*YCSDGKLRTTLRERQ*PNVEPGRYRLQLLAALWNS*LLDADDFPRVKRRHD 537
P+W+GEEQ*YCS GKL T L +RQ NVE YRLQLLA + NS*LLDA+ FPR+ HD
Sbjct: 700 PYWAGEEQ*YCSYGKLCTALCKRQRSNVESRCYRLQLLATIRNS*LLDAEVFPRI*WCHD 521
Query: 536 PSG*YQFPVLEFAGRVCDHVAGCRE*LPESEGRELRVGPR*PHGLHERARGQRQRAGINR 357
S QF +L F+ +C H+AG RE*LPES+ ELRVG R PH L RA G QRAG+ R
Sbjct: 520 SSNYNQFQLLWFSSSICYHLAGFRE*LPESKDCELRVGHREPHNLCVRAPG*HQRAGVKR 341
Query: 356 HRPHVWQRHGRELLQ*PEQGCAGEKPAEQRRGADAGHAGSSLLHRLRSGAG*AQACGGDM 177
+ HV Q G + Q*P QG A +K RRG DAGHA LL +R A +AC D+
Sbjct: 340 YCSHVQQCKG*KFFQ*PNQGRARDKSVA*RRGTDAGHARCPLLLLVRPCACSVRACRRDV 161
Score = 179 bits (385), Expect = 2e-044
Identities = 100/172 (58%), Positives = 111/172 (64%)
Frame = -1 / -1
Query: 696 TVILFRWQVTHHSS*TTMTKRGTRTLSSSTPGSTMELLATGCRRFSASQAAP*SIRLISV 517
TVILF WQV H S *TT KRG + LSSSTPG+ ELL TGCR FSA+ P* I+L SV
Sbjct: 680 TVILFIWQVMHRSL*TTTIKRGIQMLSSSTPGNNTELLVTGCRSFSANLVVP*FIQLQSV 501
Query: 516 PGTRVRWPRLRSRGRMQRIAS*E*RS*TSGRTPLASRSPRAGSGPASTRWDQPPPSSRLA 337
P T V L S GR+ I S*E*R *TSGRTP AS+S GS ASTRW Q SR A
Sbjct: 500 PATLVL*QHLLSPGRIPGITS*E*RL*TSGRTP*ASQSLCPGSRLASTRWGQTLLFSRPA 321
Query: 336 TSWTRTPSVTRTRLRR*KAS*ATPRSRCRSRWLLTPSPPSIWRWLSPSLWRR 181
+ SVT+ R *+ S TPR+RCRSR L TPSP S R LSPSL +R
Sbjct: 320 M*RMKILSVTQPRSCP*QVSCITPRNRCRSRSLPTPSPRSTLRLLSPSLSQR 165
>gb|BJ466672.1|BJ466672 BJ466672 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags33f17 3', mRNA sequence
Length = 715
Score = 318 bits (688), Expect = 3e-086
Identities = 134/175 (76%), Positives = 145/175 (82%)
Frame = -3 / -3
Query: 700 KNSDIVQMASYAPLFVNDNDQTWNPDAIVFNSWQHYGTPSYWMQTIFRESSGAMIHPVNI 521
K SDIV MASYAPLFVNDNDQTWNPDAIVFNSWQ YGTPSYWMQ FRESSGAMIHP+ I
Sbjct: 710 KXSDIVHMASYAPLFVNDNDQTWNPDAIVFNSWQQYGTPSYWMQKFFRESSGAMIHPITI 531
Query: 520 XXXXXXXXXXXAITWQDAENSFLRVKVVNFGSDPVSLTVSTSGLGASVNALGSTATVLTS 341
AITWQD+ N+FLRVK+VNFGSD VSLT+S SGL AS+NALGS ATVLTS
Sbjct: 530 SSSYSGSLAASAITWQDSGNNFLRVKIVNFGSDTVSLTISVSGLQASINALGSNATVLTS 351
Query: 340 GNVMDENSFSNPNKVAPVKSQLSNAAEQMQVTLAPHSFTAFDLALAEPKLVAEI* 176
NV DENSFSNP KV PV SQL NAAEQMQVTLA HSF++FDLALA+ +LVAE+*
Sbjct: 350 SNVKDENSFSNPTKVVPVTSQLHNAAEQMQVTLAAHSFSSFDLALAQSELVAEM* 186
Score = 273 bits (591), Expect = 7e-073
Identities = 136/175 (77%), Positives = 138/175 (78%)
Frame = +3 / +1
Query: 177 HISATSLGSASARSKAVKE*GASVTCICSAALLSWLFTGATLFGLLKEFSSMTLPDVRTV 356
HISATS ASARS KE ASVTCICSAAL + L TG TL GLLKEFSS TL DVRTV
Sbjct: 187 HISATSSD*ASARSNEEKEWAASVTCICSAALCN*LVTGTTLVGLLKEFSSFTLLDVRTV 366
Query: 357 AVDPSALTLAPSPLVETVRLTGSDPKFTTFTLRKLFSASCHVIADAASELEYRELILTGW 536
A DPSAL LA SP E VRLT SDPKFT FTLRKLF SC VIADAA E E ELI+ G
Sbjct: 367 AFDPSALMLAWSPDTEIVRLTVSDPKFTIFTLRKLFPESCQVIADAAREPE*LELIVIG* 546
Query: 537 IMAPLDSRKIVCIQ*LGVP*CCQELKTIASGFHVWSLSFTKSGA*LAI*TISLFF 701
IMAPLDSRK CIQ*LGVP CCQELKTIASGFHV SLSFTKSGA*LAI*TISL F
Sbjct: 547 IMAPLDSRKNFCIQ*LGVPYCCQELKTIASGFHV*SLSFTKSGA*LAI*TISLXF 711
Score = 233 bits (504), Expect = 7e-061
Identities = 104/176 (59%), Positives = 128/176 (72%)
Frame = +2 / +3
Query: 176 SYLRHKLGLSQRQIEGGEGVRSQRDLHLLRGVAQLAFHRRNLVRVTEGVLVHDVARREDG 355
S+L KLGLS+R++E GEGV S+RDLHL RGV QL H +L VTE + + +A RE+
Sbjct: 186 SHLCDKLGLSKRKVERGEGVGSERDLHLFRGVMQLTCHGHDLGWVTERIFILYIAGRENS 365
Query: 356 GG*SQRVDAGPEPARGDREANGVRPEVHDLHSQEAILCILPRDRRRGQRTRVPGTDINRM 535
* QRVDA EP D EA+GVRPEVH+L+SQE I ILP D R RTRV GTD N M
Sbjct: 366 SV*PQRVDASLEPGHRDCEAHGVRPEVHNLYSQEVIPGILPGDSRCC*RTRVAGTDCNWM 545
Query: 536 DHGAA*LAENRLHPVARSSIVLPGVEDDSVRVPRLVIVVHEEWCVTCHLNNITVLL 703
+HG AE LHPV RSS++LPGVEDDS+ +PRL++VV++E C+TCH+NNIT LL
Sbjct: 546 NHGTTRFAEKLLHPVTRSSVLLPGVEDDSIWIPRLIVVVYKERCITCHMNNITXLL 713
Score = 178 bits (383), Expect = 3e-044
Identities = 94/175 (53%), Positives = 110/175 (62%)
Frame = -2 / -2
Query: 701 EEQ*YCSDGKLRTTLRERQ*PNVEPGRYRLQLLAALWNS*LLDADDFPRVKRRHDPSG*Y 522
E Q*YCS GKL T L +RQ NVE YRLQLLA + NS*LLDA+ FPR+ HD S
Sbjct: 711 EXQ*YCSYGKLCTALCKRQRSNVESRCYRLQLLATIRNS*LLDAEVFPRI*WCHDSSNYN 532
Query: 521 QFPVLEFAGRVCDHVAGCRE*LPESEGRELRVGPR*PHGLHERARGQRQRAGINRHRPHV 342
QF +L F+ +C H+AG RE*LPES+ ELRVG R PH L RA G QRAG+ R+ HV
Sbjct: 531 QFQLLWFSSSICYHLAGFRE*LPESKDCELRVGHREPHNLCVRAPG*HQRAGVKRYCSHV 352
Query: 341 WQRHGRELLQ*PEQGCAGEKPAEQRRGADAGHAGSSLLHRLRSGAG*AQACGGDM 177
Q G + Q*P QG A +K RRG DAGHA LL +R A +AC D+
Sbjct: 351 QQCKG*KFFQ*PNQGRARDKSVA*RRGTDAGHARCPLLLLVRPCACSVRACRRDV 187
Score = 177 bits (380), Expect = 9e-044
Identities = 99/171 (57%), Positives = 110/171 (64%)
Frame = -1 / -1
Query: 693 VILFRWQVTHHSS*TTMTKRGTRTLSSSTPGSTMELLATGCRRFSASQAAP*SIRLISVP 514
VILF WQV H S *TT KRG + LSSSTPG+ ELL TGCR FSA+ P* I+L SVP
Sbjct: 703 VILFIWQVMHRSL*TTTIKRGIQMLSSSTPGNNTELLVTGCRSFSANLVVP*FIQLQSVP 524
Query: 513 GTRVRWPRLRSRGRMQRIAS*E*RS*TSGRTPLASRSPRAGSGPASTRWDQPPPSSRLAT 334
T V L S GR+ I S*E*R *TSGRTP AS+S GS ASTRW Q SR A
Sbjct: 523 ATLVL*QHLLSPGRIPGITS*E*RL*TSGRTP*ASQSLCPGSRLASTRWGQTLLFSRPAM 344
Query: 333 SWTRTPSVTRTRLRR*KAS*ATPRSRCRSRWLLTPSPPSIWRWLSPSLWRR 181
+ SVT+ R *+ S TPR+RCRSR L TPSP S R LSPSL +R
Sbjct: 343 *RMKILSVTQPRSCP*QVSCITPRNRCRSRSLPTPSPRSTLRLLSPSLSQR 191
>gb|AV917599.1|AV917599 AV917599 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags10j19 3', mRNA sequence
Length = 656
Score = 287 bits (621), Expect = 5e-077
Identities = 120/159 (75%), Positives = 131/159 (82%)
Frame = -3 / -2
Query: 652 NDNDQTWNPDAIVFNSWQHYGTPSYWMQTIFRESSGAMIHPVNIXXXXXXXXXXXAITWQ 473
NDNDQTWNPDAIVFNSWQ YGTPSYWMQ FRESSGAMIHP+ I AITWQ
Sbjct: 655 NDNDQTWNPDAIVFNSWQQYGTPSYWMQKFFRESSGAMIHPITISSSYSGSLAASAITWQ 476
Query: 472 DAENSFLRVKVVNFGSDPVSLTVSTSGLGASVNALGSTATVLTSGNVMDENSFSNPNKVA 293
D+ N+FLRVK+VNFGSD VSLT+S SGL AS+NALGS ATVLTS NV DENSFSNP KV
Sbjct: 475 DSGNNFLRVKIVNFGSDTVSLTISVSGLQASINALGSNATVLTSSNVKDENSFSNPTKVV 296
Query: 292 PVKSQLSNAAEQMQVTLAPHSFTAFDLALAEPKLVAEI* 176
PV SQL NAAEQMQVTLA HSF++FDLALA+ +LVAE+*
Sbjct: 295 PVTSQLHNAAEQMQVTLAAHSFSSFDLALAQSELVAEM* 179
Score = 246 bits (531), Expect = 1e-064
Identities = 121/159 (76%), Positives = 123/159 (77%)
Frame = +3 / +3
Query: 177 HISATSLGSASARSKAVKE*GASVTCICSAALLSWLFTGATLFGLLKEFSSMTLPDVRTV 356
HISATS ASARS KE ASVTCICSAAL + L TG TL GLLKEFSS TL DVRTV
Sbjct: 180 HISATSSD*ASARSNEEKEWAASVTCICSAALCN*LVTGTTLVGLLKEFSSFTLLDVRTV 359
Query: 357 AVDPSALTLAPSPLVETVRLTGSDPKFTTFTLRKLFSASCHVIADAASELEYRELILTGW 536
A DPSAL LA SP E VRLT SDPKFT FTLRKLF SC VIADAA E E ELI+ G
Sbjct: 360 AFDPSALMLAWSPDTEIVRLTVSDPKFTIFTLRKLFPESCQVIADAAREPE*LELIVIG* 539
Query: 537 IMAPLDSRKIVCIQ*LGVP*CCQELKTIASGFHVWSLSF 653
IMAPLDSRK CIQ*LGVP CCQELKTIASGFHV SLSF
Sbjct: 540 IMAPLDSRKNFCIQ*LGVPYCCQELKTIASGFHV*SLSF 656
Score = 202 bits (435), Expect = 2e-051
Identities = 93/159 (58%), Positives = 113/159 (71%)
Frame = +2 / +2
Query: 176 SYLRHKLGLSQRQIEGGEGVRSQRDLHLLRGVAQLAFHRRNLVRVTEGVLVHDVARREDG 355
S+L KLGLS+R++E GEGV S+RDLHL RGV QL H +L VTE + + +A RE+
Sbjct: 179 SHLCDKLGLSKRKVERGEGVGSERDLHLFRGVMQLTCHGHDLGWVTERIFILYIAGRENS 358
Query: 356 GG*SQRVDAGPEPARGDREANGVRPEVHDLHSQEAILCILPRDRRRGQRTRVPGTDINRM 535
* QRVDA EP D EA+GVRPEVH+L+SQE I ILP D R RTRV GTD N M
Sbjct: 359 SV*PQRVDASLEPGHRDCEAHGVRPEVHNLYSQEVIPGILPGDSRCC*RTRVAGTDCNWM 538
Query: 536 DHGAA*LAENRLHPVARSSIVLPGVEDDSVRVPRLVIVV 652
+HG AE LHPV RSS++LPGVEDDS+ +PRL++VV
Sbjct: 539 NHGTTRFAEKLLHPVTRSSVLLPGVEDDSIWIPRLIVVV 655
Score = 157 bits (338), Expect = 6e-038
Identities = 83/159 (52%), Positives = 99/159 (62%)
Frame = -2 / -1
Query: 653 ERQ*PNVEPGRYRLQLLAALWNS*LLDADDFPRVKRRHDPSG*YQFPVLEFAGRVCDHVA 474
+RQ NVE YRLQLLA + NS*LLDA+ FPR+ HD S QF +L F+ +C H+A
Sbjct: 656 KRQRSNVESRCYRLQLLATIRNS*LLDAEVFPRI*WCHDSSNYNQFQLLWFSSSICYHLA 477
Query: 473 GCRE*LPESEGRELRVGPR*PHGLHERARGQRQRAGINRHRPHVWQRHGRELLQ*PEQGC 294
G RE*LPES+ ELRVG R PH L RA G QRAG+ R+ HV Q G + Q*P QG
Sbjct: 476 GFRE*LPESKDCELRVGHREPHNLCVRAPG*HQRAGVKRYCSHVQQCKG*KFFQ*PNQGR 297
Query: 293 AGEKPAEQRRGADAGHAGSSLLHRLRSGAG*AQACGGDM 177
A +K RRG DAGHA LL +R A +AC D+
Sbjct: 296 ARDKSVA*RRGTDAGHARCPLLLLVRPCACSVRACRRDV 180
Score = 156 bits (335), Expect = 1e-037
Identities = 89/157 (56%), Positives = 100/157 (63%)
Frame = -1 / -3
Query: 651 TTMTKRGTRTLSSSTPGSTMELLATGCRRFSASQAAP*SIRLISVPGTRVRWPRLRSRGR 472
TT KRG + LSSSTPG+ ELL TGCR FSA+ P* I+L SVP T V L S GR
Sbjct: 654 TTTIKRGIQMLSSSTPGNNTELLVTGCRSFSANLVVP*FIQLQSVPATLVL*QHLLSPGR 475
Query: 471 MQRIAS*E*RS*TSGRTPLASRSPRAGSGPASTRWDQPPPSSRLATSWTRTPSVTRTRLR 292
+ I S*E*R *TSGRTP AS+S GS ASTRW Q SR A + SVT+ R
Sbjct: 474 IPGITS*E*RL*TSGRTP*ASQSLCPGSRLASTRWGQTLLFSRPAM*RMKILSVTQPRSC 295
Query: 291 R*KAS*ATPRSRCRSRWLLTPSPPSIWRWLSPSLWRR 181
*+ S TPR+RCRSR L TPSP S R LSPSL +R
Sbjct: 294 P*QVSCITPRNRCRSRSLPTPSPRSTLRLLSPSLSQR 184
>gb|AV927973.1|AV927973 AV927973 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp.
vulgare cDNA clone basd13h16 3', mRNA sequence
Length = 642
Score = 287 bits (621), Expect = 5e-077
Identities = 120/159 (75%), Positives = 131/159 (82%)
Frame = -3 / -2
Query: 652 NDNDQTWNPDAIVFNSWQHYGTPSYWMQTIFRESSGAMIHPVNIXXXXXXXXXXXAITWQ 473
NDNDQTWNPDAIVFNSWQ YGTPSYWMQ FRESSGAMIHP+ I AITWQ
Sbjct: 641 NDNDQTWNPDAIVFNSWQQYGTPSYWMQKFFRESSGAMIHPITISSSYSGSLAASAITWQ 462
Query: 472 DAENSFLRVKVVNFGSDPVSLTVSTSGLGASVNALGSTATVLTSGNVMDENSFSNPNKVA 293
D+ N+FLRVK+VNFGSD VSLT+S SGL AS+NALGS ATVLTS NV DENSFSNP KV
Sbjct: 461 DSGNNFLRVKIVNFGSDTVSLTISVSGLQASINALGSNATVLTSSNVKDENSFSNPTKVV 282
Query: 292 PVKSQLSNAAEQMQVTLAPHSFTAFDLALAEPKLVAEI* 176
PV SQL NAAEQMQVTLA HSF++FDLALA+ +LVAE+*
Sbjct: 281 PVTSQLHNAAEQMQVTLAAHSFSSFDLALAQSELVAEM* 165
Score = 246 bits (531), Expect = 1e-064
Identities = 121/159 (76%), Positives = 123/159 (77%)
Frame = +3 / +1
Query: 177 HISATSLGSASARSKAVKE*GASVTCICSAALLSWLFTGATLFGLLKEFSSMTLPDVRTV 356
HISATS ASARS KE ASVTCICSAAL + L TG TL GLLKEFSS TL DVRTV
Sbjct: 166 HISATSSD*ASARSNEEKEWAASVTCICSAALCN*LVTGTTLVGLLKEFSSFTLLDVRTV 345
Query: 357 AVDPSALTLAPSPLVETVRLTGSDPKFTTFTLRKLFSASCHVIADAASELEYRELILTGW 536
A DPSAL LA SP E VRLT SDPKFT FTLRKLF SC VIADAA E E ELI+ G
Sbjct: 346 AFDPSALMLAWSPDTEIVRLTVSDPKFTIFTLRKLFPESCQVIADAAREPE*LELIVIG* 525
Query: 537 IMAPLDSRKIVCIQ*LGVP*CCQELKTIASGFHVWSLSF 653
IMAPLDSRK CIQ*LGVP CCQELKTIASGFHV SLSF
Sbjct: 526 IMAPLDSRKNFCIQ*LGVPYCCQELKTIASGFHV*SLSF 642
Score = 202 bits (435), Expect = 2e-051
Identities = 93/159 (58%), Positives = 113/159 (71%)
Frame = +2 / +3
Query: 176 SYLRHKLGLSQRQIEGGEGVRSQRDLHLLRGVAQLAFHRRNLVRVTEGVLVHDVARREDG 355
S+L KLGLS+R++E GEGV S+RDLHL RGV QL H +L VTE + + +A RE+
Sbjct: 165 SHLCDKLGLSKRKVERGEGVGSERDLHLFRGVMQLTCHGHDLGWVTERIFILYIAGRENS 344
Query: 356 GG*SQRVDAGPEPARGDREANGVRPEVHDLHSQEAILCILPRDRRRGQRTRVPGTDINRM 535
* QRVDA EP D EA+GVRPEVH+L+SQE I ILP D R RTRV GTD N M
Sbjct: 345 SV*PQRVDASLEPGHRDCEAHGVRPEVHNLYSQEVIPGILPGDSRCC*RTRVAGTDCNWM 524
Query: 536 DHGAA*LAENRLHPVARSSIVLPGVEDDSVRVPRLVIVV 652
+HG AE LHPV RSS++LPGVEDDS+ +PRL++VV
Sbjct: 525 NHGTTRFAEKLLHPVTRSSVLLPGVEDDSIWIPRLIVVV 641
Score = 157 bits (338), Expect = 6e-038
Identities = 83/159 (52%), Positives = 99/159 (62%)
Frame = -2 / -1
Query: 653 ERQ*PNVEPGRYRLQLLAALWNS*LLDADDFPRVKRRHDPSG*YQFPVLEFAGRVCDHVA 474
+RQ NVE YRLQLLA + NS*LLDA+ FPR+ HD S QF +L F+ +C H+A
Sbjct: 642 KRQRSNVESRCYRLQLLATIRNS*LLDAEVFPRI*WCHDSSNYNQFQLLWFSSSICYHLA 463
Query: 473 GCRE*LPESEGRELRVGPR*PHGLHERARGQRQRAGINRHRPHVWQRHGRELLQ*PEQGC 294
G RE*LPES+ ELRVG R PH L RA G QRAG+ R+ HV Q G + Q*P QG
Sbjct: 462 GFRE*LPESKDCELRVGHREPHNLCVRAPG*HQRAGVKRYCSHVQQCKG*KFFQ*PNQGR 283
Query: 293 AGEKPAEQRRGADAGHAGSSLLHRLRSGAG*AQACGGDM 177
A +K RRG DAGHA LL +R A +AC D+
Sbjct: 282 ARDKSVA*RRGTDAGHARCPLLLLVRPCACSVRACRRDV 166
Score = 156 bits (335), Expect = 1e-037
Identities = 89/157 (56%), Positives = 100/157 (63%)
Frame = -1 / -3
Query: 651 TTMTKRGTRTLSSSTPGSTMELLATGCRRFSASQAAP*SIRLISVPGTRVRWPRLRSRGR 472
TT KRG + LSSSTPG+ ELL TGCR FSA+ P* I+L SVP T V L S GR
Sbjct: 640 TTTIKRGIQMLSSSTPGNNTELLVTGCRSFSANLVVP*FIQLQSVPATLVL*QHLLSPGR 461
Query: 471 MQRIAS*E*RS*TSGRTPLASRSPRAGSGPASTRWDQPPPSSRLATSWTRTPSVTRTRLR 292
+ I S*E*R *TSGRTP AS+S GS ASTRW Q SR A + SVT+ R
Sbjct: 460 IPGITS*E*RL*TSGRTP*ASQSLCPGSRLASTRWGQTLLFSRPAM*RMKILSVTQPRSC 281
Query: 291 R*KAS*ATPRSRCRSRWLLTPSPPSIWRWLSPSLWRR 181
*+ S TPR+RCRSR L TPSP S R LSPSL +R
Sbjct: 280 P*QVSCITPRNRCRSRSLPTPSPRSTLRLLSPSLSQR 170
>gb|AV930332.1|AV930332 AV930332 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp.
vulgare cDNA clone basd22b16 3', mRNA sequence
Length = 646
Score = 287 bits (621), Expect = 5e-077
Identities = 120/159 (75%), Positives = 131/159 (82%)
Frame = -3 / -2
Query: 652 NDNDQTWNPDAIVFNSWQHYGTPSYWMQTIFRESSGAMIHPVNIXXXXXXXXXXXAITWQ 473
NDNDQTWNPDAIVFNSWQ YGTPSYWMQ FRESSGAMIHP+ I AITWQ
Sbjct: 645 NDNDQTWNPDAIVFNSWQQYGTPSYWMQKFFRESSGAMIHPITISSSYSGSLAASAITWQ 466
Query: 472 DAENSFLRVKVVNFGSDPVSLTVSTSGLGASVNALGSTATVLTSGNVMDENSFSNPNKVA 293
D+ N+FLRVK+VNFGSD VSLT+S SGL AS+NALGS ATVLTS NV DENSFSNP KV
Sbjct: 465 DSGNNFLRVKIVNFGSDTVSLTISVSGLQASINALGSNATVLTSSNVKDENSFSNPTKVV 286
Query: 292 PVKSQLSNAAEQMQVTLAPHSFTAFDLALAEPKLVAEI* 176
PV SQL NAAEQMQVTLA HSF++FDLALA+ +LVAE+*
Sbjct: 285 PVTSQLHNAAEQMQVTLAAHSFSSFDLALAQSELVAEM* 169
Score = 246 bits (531), Expect = 1e-064
Identities = 121/159 (76%), Positives = 123/159 (77%)
Frame = +3 / +2
Query: 177 HISATSLGSASARSKAVKE*GASVTCICSAALLSWLFTGATLFGLLKEFSSMTLPDVRTV 356
HISATS ASARS KE ASVTCICSAAL + L TG TL GLLKEFSS TL DVRTV
Sbjct: 170 HISATSSD*ASARSNEEKEWAASVTCICSAALCN*LVTGTTLVGLLKEFSSFTLLDVRTV 349
Query: 357 AVDPSALTLAPSPLVETVRLTGSDPKFTTFTLRKLFSASCHVIADAASELEYRELILTGW 536
A DPSAL LA SP E VRLT SDPKFT FTLRKLF SC VIADAA E E ELI+ G
Sbjct: 350 AFDPSALMLAWSPDTEIVRLTVSDPKFTIFTLRKLFPESCQVIADAAREPE*LELIVIG* 529
Query: 537 IMAPLDSRKIVCIQ*LGVP*CCQELKTIASGFHVWSLSF 653
IMAPLDSRK CIQ*LGVP CCQELKTIASGFHV SLSF
Sbjct: 530 IMAPLDSRKNFCIQ*LGVPYCCQELKTIASGFHV*SLSF 646
Score = 202 bits (435), Expect = 2e-051
Identities = 93/159 (58%), Positives = 113/159 (71%)
Frame = +2 / +1
Query: 176 SYLRHKLGLSQRQIEGGEGVRSQRDLHLLRGVAQLAFHRRNLVRVTEGVLVHDVARREDG 355
S+L KLGLS+R++E GEGV S+RDLHL RGV QL H +L VTE + + +A RE+
Sbjct: 169 SHLCDKLGLSKRKVERGEGVGSERDLHLFRGVMQLTCHGHDLGWVTERIFILYIAGRENS 348
Query: 356 GG*SQRVDAGPEPARGDREANGVRPEVHDLHSQEAILCILPRDRRRGQRTRVPGTDINRM 535
* QRVDA EP D EA+GVRPEVH+L+SQE I ILP D R RTRV GTD N M
Sbjct: 349 SV*PQRVDASLEPGHRDCEAHGVRPEVHNLYSQEVIPGILPGDSRCC*RTRVAGTDCNWM 528
Query: 536 DHGAA*LAENRLHPVARSSIVLPGVEDDSVRVPRLVIVV 652
+HG AE LHPV RSS++LPGVEDDS+ +PRL++VV
Sbjct: 529 NHGTTRFAEKLLHPVTRSSVLLPGVEDDSIWIPRLIVVV 645
Score = 157 bits (338), Expect = 6e-038
Identities = 83/159 (52%), Positives = 99/159 (62%)
Frame = -2 / -1
Query: 653 ERQ*PNVEPGRYRLQLLAALWNS*LLDADDFPRVKRRHDPSG*YQFPVLEFAGRVCDHVA 474
+RQ NVE YRLQLLA + NS*LLDA+ FPR+ HD S QF +L F+ +C H+A
Sbjct: 646 KRQRSNVESRCYRLQLLATIRNS*LLDAEVFPRI*WCHDSSNYNQFQLLWFSSSICYHLA 467
Query: 473 GCRE*LPESEGRELRVGPR*PHGLHERARGQRQRAGINRHRPHVWQRHGRELLQ*PEQGC 294
G RE*LPES+ ELRVG R PH L RA G QRAG+ R+ HV Q G + Q*P QG
Sbjct: 466 GFRE*LPESKDCELRVGHREPHNLCVRAPG*HQRAGVKRYCSHVQQCKG*KFFQ*PNQGR 287
Query: 293 AGEKPAEQRRGADAGHAGSSLLHRLRSGAG*AQACGGDM 177
A +K RRG DAGHA LL +R A +AC D+
Sbjct: 286 ARDKSVA*RRGTDAGHARCPLLLLVRPCACSVRACRRDV 170
Score = 156 bits (335), Expect = 1e-037
Identities = 89/157 (56%), Positives = 100/157 (63%)
Frame = -1 / -3
Query: 651 TTMTKRGTRTLSSSTPGSTMELLATGCRRFSASQAAP*SIRLISVPGTRVRWPRLRSRGR 472
TT KRG + LSSSTPG+ ELL TGCR FSA+ P* I+L SVP T V L S GR
Sbjct: 644 TTTIKRGIQMLSSSTPGNNTELLVTGCRSFSANLVVP*FIQLQSVPATLVL*QHLLSPGR 465
Query: 471 MQRIAS*E*RS*TSGRTPLASRSPRAGSGPASTRWDQPPPSSRLATSWTRTPSVTRTRLR 292
+ I S*E*R *TSGRTP AS+S GS ASTRW Q SR A + SVT+ R
Sbjct: 464 IPGITS*E*RL*TSGRTP*ASQSLCPGSRLASTRWGQTLLFSRPAM*RMKILSVTQPRSC 285
Query: 291 R*KAS*ATPRSRCRSRWLLTPSPPSIWRWLSPSLWRR 181
*+ S TPR+RCRSR L TPSP S R LSPSL +R
Sbjct: 284 P*QVSCITPRNRCRSRSLPTPSPRSTLRLLSPSLSQR 174
>gb|AV934949.1|AV934949 AV934949 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal2e14 3', mRNA sequence
Length = 654
Score = 287 bits (621), Expect = 5e-077
Identities = 120/159 (75%), Positives = 131/159 (82%)
Frame = -3 / -1
Query: 652 NDNDQTWNPDAIVFNSWQHYGTPSYWMQTIFRESSGAMIHPVNIXXXXXXXXXXXAITWQ 473
NDNDQTWNPDAIVFNSWQ YGTPSYWMQ FRESSGAMIHP+ I AITWQ
Sbjct: 654 NDNDQTWNPDAIVFNSWQQYGTPSYWMQKFFRESSGAMIHPITISSSYSGSLAASAITWQ 475
Query: 472 DAENSFLRVKVVNFGSDPVSLTVSTSGLGASVNALGSTATVLTSGNVMDENSFSNPNKVA 293
D+ N+FLRVK+VNFGSD VSLT+S SGL AS+NALGS ATVLTS NV DENSFSNP KV
Sbjct: 474 DSGNNFLRVKIVNFGSDTVSLTISVSGLQASINALGSNATVLTSSNVKDENSFSNPTKVV 295
Query: 292 PVKSQLSNAAEQMQVTLAPHSFTAFDLALAEPKLVAEI* 176
PV SQL NAAEQMQVTLA HSF++FDLALA+ +LVAE+*
Sbjct: 294 PVTSQLHNAAEQMQVTLAAHSFSSFDLALAQSELVAEM* 178
Score = 243 bits (525), Expect = 9e-064
Identities = 120/158 (75%), Positives = 122/158 (77%)
Frame = +3 / +2
Query: 177 HISATSLGSASARSKAVKE*GASVTCICSAALLSWLFTGATLFGLLKEFSSMTLPDVRTV 356
HISATS ASARS KE ASVTCICSAAL + L TG TL GLLKEFSS TL DVRTV
Sbjct: 179 HISATSSD*ASARSNEEKEWAASVTCICSAALCN*LVTGTTLVGLLKEFSSFTLLDVRTV 358
Query: 357 AVDPSALTLAPSPLVETVRLTGSDPKFTTFTLRKLFSASCHVIADAASELEYRELILTGW 536
A DPSAL LA SP E VRLT SDPKFT FTLRKLF SC VIADAA E E ELI+ G
Sbjct: 359 AFDPSALMLAWSPDTEIVRLTVSDPKFTIFTLRKLFPESCQVIADAAREPE*LELIVIG* 538
Query: 537 IMAPLDSRKIVCIQ*LGVP*CCQELKTIASGFHVWSLS 650
IMAPLDSRK CIQ*LGVP CCQELKTIASGFHV SLS
Sbjct: 539 IMAPLDSRKNFCIQ*LGVPYCCQELKTIASGFHV*SLS 652
Score = 202 bits (435), Expect = 2e-051
Identities = 93/159 (58%), Positives = 113/159 (71%)
Frame = +2 / +1
Query: 176 SYLRHKLGLSQRQIEGGEGVRSQRDLHLLRGVAQLAFHRRNLVRVTEGVLVHDVARREDG 355
S+L KLGLS+R++E GEGV S+RDLHL RGV QL H +L VTE + + +A RE+
Sbjct: 178 SHLCDKLGLSKRKVERGEGVGSERDLHLFRGVMQLTCHGHDLGWVTERIFILYIAGRENS 357
Query: 356 GG*SQRVDAGPEPARGDREANGVRPEVHDLHSQEAILCILPRDRRRGQRTRVPGTDINRM 535
* QRVDA EP D EA+GVRPEVH+L+SQE I ILP D R RTRV GTD N M
Sbjct: 358 SV*PQRVDASLEPGHRDCEAHGVRPEVHNLYSQEVIPGILPGDSRCC*RTRVAGTDCNWM 537
Query: 536 DHGAA*LAENRLHPVARSSIVLPGVEDDSVRVPRLVIVV 652
+HG AE LHPV RSS++LPGVEDDS+ +PRL++VV
Sbjct: 538 NHGTTRFAEKLLHPVTRSSVLLPGVEDDSIWIPRLIVVV 654
Score = 157 bits (337), Expect = 8e-038
Identities = 83/158 (52%), Positives = 98/158 (62%)
Frame = -2 / -3
Query: 650 RQ*PNVEPGRYRLQLLAALWNS*LLDADDFPRVKRRHDPSG*YQFPVLEFAGRVCDHVAG 471
RQ NVE YRLQLLA + NS*LLDA+ FPR+ HD S QF +L F+ +C H+AG
Sbjct: 652 RQRSNVESRCYRLQLLATIRNS*LLDAEVFPRI*WCHDSSNYNQFQLLWFSSSICYHLAG 473
Query: 470 CRE*LPESEGRELRVGPR*PHGLHERARGQRQRAGINRHRPHVWQRHGRELLQ*PEQGCA 291
RE*LPES+ ELRVG R PH L RA G QRAG+ R+ HV Q G + Q*P QG A
Sbjct: 472 FRE*LPESKDCELRVGHREPHNLCVRAPG*HQRAGVKRYCSHVQQCKG*KFFQ*PNQGRA 293
Query: 290 GEKPAEQRRGADAGHAGSSLLHRLRSGAG*AQACGGDM 177
+K RRG DAGHA LL +R A +AC D+
Sbjct: 292 RDKSVA*RRGTDAGHARCPLLLLVRPCACSVRACRRDV 179
Score = 156 bits (335), Expect = 1e-037
Identities = 89/157 (56%), Positives = 100/157 (63%)
Frame = -1 / -2
Query: 651 TTMTKRGTRTLSSSTPGSTMELLATGCRRFSASQAAP*SIRLISVPGTRVRWPRLRSRGR 472
TT KRG + LSSSTPG+ ELL TGCR FSA+ P* I+L SVP T V L S GR
Sbjct: 653 TTTIKRGIQMLSSSTPGNNTELLVTGCRSFSANLVVP*FIQLQSVPATLVL*QHLLSPGR 474
Query: 471 MQRIAS*E*RS*TSGRTPLASRSPRAGSGPASTRWDQPPPSSRLATSWTRTPSVTRTRLR 292
+ I S*E*R *TSGRTP AS+S GS ASTRW Q SR A + SVT+ R
Sbjct: 473 IPGITS*E*RL*TSGRTP*ASQSLCPGSRLASTRWGQTLLFSRPAM*RMKILSVTQPRSC 294
Query: 291 R*KAS*ATPRSRCRSRWLLTPSPPSIWRWLSPSLWRR 181
*+ S TPR+RCRSR L TPSP S R LSPSL +R
Sbjct: 293 P*QVSCITPRNRCRSRSLPTPSPRSTLRLLSPSLSQR 183
>gb|BM368797.2|BM368797 EBem08_SQ004_K02_R embryo, 40 DPA, no treatment, cv Optic, EBem08
Hordeum vulgare subsp. vulgare cDNA clone
EBem08_SQ004_K02 5', mRNA sequence
Length = 479
Score = 276 bits (598), Expect = 8e-074
Identities = 110/151 (72%), Positives = 125/151 (82%)
Frame = -3 / +3
Query: 712 TGLEKNSDIVQMASYAPLFVNDNDQTWNPDAIVFNSWQHYGTPSYWMQTIFRESSGAMIH 533
TGLEKNSD+VQMASYAPLF+NDND+TWNPDAIVFNSWQ YGTPSYWMQT+FRESSGA +H
Sbjct: 27 TGLEKNSDVVQMASYAPLFINDNDRTWNPDAIVFNSWQQYGTPSYWMQTLFRESSGATVH 206
Query: 532 PVNIXXXXXXXXXXXAITWQDAENSFLRVKVVNFGSDPVSLTVSTSGLGASVNALGSTAT 353
P+++ AITW D ENSFLRVK+VNFG D V LT+S +GL S+NALGSTAT
Sbjct: 207 PISLSSSCSGLLAASAITWHDDENSFLRVKIVNFGPDAVGLTISATGLQGSINALGSTAT 386
Query: 352 VLTSGNVMDENSFSNPNKVAPVKSQLSNAAE 260
VLTSG VMDENSF+NPNKV PV +L +AAE
Sbjct: 387 VLTSGGVMDENSFANPNKVVPVTVELRDAAE 479
Score = 264 bits (570), Expect = 6e-070
Identities = 124/159 (77%), Positives = 130/159 (81%)
Frame = +3 / -2
Query: 261 SAALLSWLFTGATLFGLLKEFSSMTLPDVRTVAVDPSALTLAPSPLVETVRLTGSDPKFT 440
SAA + TG TLFGL KEFSS+T PDVRTVAVDPSAL L SP+ E VR T S PKFT
Sbjct: 478 SAASRNSTVTGTTLFGLAKEFSSITPPDVRTVAVDPSALMLPWSPVAEMVRPTASGPKFT 299
Query: 441 TFTLRKLFSASCHVIADAASELEYRELILTGWIMAPLDSRKIVCIQ*LGVP*CCQELKTI 620
FTLRKLFS+SCHVIADAAS+ E EL L GW +APLDSRK VCIQ*LGVP CCQELKTI
Sbjct: 298 IFTLRKLFSSSCHVIADAASKPEQLELRLMGWTVAPLDSRKSVCIQ*LGVPYCCQELKTI 119
Query: 621 ASGFHVWSLSFTKSGA*LAI*TISLFFSRPVRKAASANE 737
ASGFHV SLSF KSGA*LAI*T SLFFS PVRKAASANE
Sbjct: 118 ASGFHVRSLSFMKSGA*LAI*TTSLFFSSPVRKAASANE 2
Score = 221 bits (477), Expect = 4e-057
Identities = 96/158 (60%), Positives = 119/158 (75%)
Frame = +2 / -1
Query: 260 LRGVAQLAFHRRNLVRVTEGVLVHDVARREDGGG*SQRVDAGPEPARGDREANGVRPEVH 439
LR VAQL HR NLV V+E VLVH AR E+G G S+R+DA EP+R D EA+G+ PE+H
Sbjct: 479 LRSVAQLDRHRHNLVWVSERVLVHYTARCENGRGGSERIDAALEPSRRDGEAHGIWPEIH 300
Query: 440 DLHSQEAILCILPRDRRRGQRTRVPGTDINRMDHGAA*LAENRLHPVARSSIVLPGVEDD 619
+LHSQEA+L I+PRDRR Q+TR T+ + MD A* +E RLHPV SS++LPGVEDD
Sbjct: 299 NLHSQEAVLVIMPRDRRCCQQTRAA*TETDGMDRSTA*FSEKRLHPVTGSSVLLPGVEDD 120
Query: 620 SVRVPRLVIVVHEEWCVTCHLNNITVLLQTSEESSFSQ 733
SV VPR V++V+EE C+ CHLNNIT+LLQ S+ES Q
Sbjct: 119 SVWVPRAVVIVYEERCIACHLNNITILLQPSKESGLCQ 6
Score = 197 bits (424), Expect = 8e-050
Identities = 92/159 (57%), Positives = 111/159 (69%)
Frame = -2 / +2
Query: 737 FVG*SCFPHWSGEEQ*YCSDGKLRTTLRERQ*PNVEPGRYRLQLLAALWNS*LLDADDFP 558
F+G FP+W+GEE * CSDGKL T L +R P+VEP RYRLQLLAA+ NS LLDAD FP
Sbjct: 2 FIGRGRFPYWAGEE**CCSDGKLCTALHKR*RPHVEPRRYRLQLLAAIRNSQLLDADAFP 181
Query: 557 RVKRRHDPSG*YQFPVLEFAGRVCDHVAGCRE*LPESEGRELRVGPR*PHGLHERARGQR 378
R+KR + PS QF +L FAG +CDHVA RE LPESE E R R PH L + A GQ
Sbjct: 182 RIKRCYGPSHQSQFKLLWFAGSICDHVA**REQLPESEDCEFRARCRGPHHLGDWAPGQH 361
Query: 377 QRAGINRHRPHVWQRHGRELLQ*PEQGCAGEKPAEQRRG 261
Q A I+R R H+W+ +GREL +*P+QGCAG+ +R G
Sbjct: 362 QCARIHRDRSHIWRCNGRELFR*PKQGCAGDGRVARRCG 478
Score = 171 bits (369), Expect = 3e-042
Identities = 88/144 (61%), Positives = 97/144 (67%)
Frame = -1 / +1
Query: 693 VILFRWQVTHHSS*TTMTKRGTRTLSSSTPGSTMELLATGCRRFSASQAAP*SIRLISVP 514
V+LFRWQ H SS*T T RGT+TLSSSTPGS EL TGCRRFS +QA SI +SV
Sbjct: 46 VMLFRWQAMHRSS*TITTARGTQTLSSSTPGSNTELPVTGCRRFSENQAVLRSIPSVSVQ 225
Query: 513 GTRVRWPRLRSRGRMQRIAS*E*RS*TSGRTPLASRSPRAGSGPASTRWDQPPPSSRLAT 334
V W LRSRG M R AS*E*R * SG+ P AS S R GS AS R D P P S LA
Sbjct: 226 AALVCWQHLRSRGMMTRTAS*E*RL*ISGQMPWASPSRRLGSRAASMRSDPPRPFSHLAV 405
Query: 333 SWTRTPSVTRTRLRR*KAS*ATPR 262
WTRT S+T+TRL R*++S AT R
Sbjct: 406 *WTRTLSLTQTRLCR*RSSCATLR 477
>gb|BI948632.1|BI948632 HVSMEl0010F06f Hordeum vulgare spike EST library HVcDNA0012
(Fusarium infected) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEl0010F06f, mRNA sequence
Length = 817
Score = 234 bits (505), Expect(2) = 1e-066
Identities = 97/138 (70%), Positives = 103/138 (74%)
Frame = -3 / +1
Query: 778 AVWRSDAGRGXXXXXXXXXXXLTGLEKNSDIVQMASYAPLFVNDNDQTWNPDAIVFNSWQ 599
AVWR+DAGRG LTGLEKNSDIV MASYAPLFVNDNDQTWNPDAIVFNSWQ
Sbjct: 163 AVWRTDAGRGSLLGSLAEAAFLTGLEKNSDIVHMASYAPLFVNDNDQTWNPDAIVFNSWQ 342
Query: 598 HYGTPSYWMQTIFRESSGAMIHPVNIXXXXXXXXXXXAITWQDAENSFLRVKVVNFGSDP 419
YGTPSYWMQ FRESSGAMIHP+ I AITWQD+ N+FLRVK VNFGSD
Sbjct: 343 QYGTPSYWMQKFFRESSGAMIHPITISSSYSGSLAASAITWQDSGNNFLRVKDVNFGSDT 522
Query: 418 VSLTVSTSGLGASVNALG 365
VSLT+S SGL AS+ G
Sbjct: 523 VSLTISVSGLPASIKRAG 576
Score = 230 bits (497), Expect = 7e-060
Identities = 110/138 (79%), Positives = 115/138 (83%)
Frame = +3 / -3
Query: 366 PSALTLAPSPLVETVRLTGSDPKFTTFTLRKLFSASCHVIADAASELEYRELILTGWIMA 545
P+ L LA SP E VRLT SDPKFT+FTLRKLF SC VIADAA E E ELI+ G IMA
Sbjct: 575 PARLMLAGSPDTEIVRLTVSDPKFTSFTLRKLFPESCQVIADAAREPE*LELIVIG*IMA 396
Query: 546 PLDSRKIVCIQ*LGVP*CCQELKTIASGFHVWSLSFTKSGA*LAI*TISLFFSRPVRKAA 725
PLDSRK CIQ*LGVP CCQELKTIASGFHV SLSFTKSGA*LAI*TISLFFS PVRKAA
Sbjct: 395 PLDSRKNFCIQ*LGVPYCCQELKTIASGFHV*SLSFTKSGA*LAI*TISLFFSSPVRKAA 216
Query: 726 SANEARRLPLPASLLQTA 779
SA+E RRLPLPAS+L TA
Sbjct: 215 SASEPRRLPLPASVLHTA 162
Score = 184 bits (396), Expect(2) = 9e-051
Identities = 80/132 (60%), Positives = 98/132 (74%)
Frame = +2 / -2
Query: 377 DAGPEPARGDREANGVRPEVHDLHSQEAILCILPRDRRRGQRTRVPGTDINRMDHGAA*L 556
DA EP D EA+GVRPEVH L+SQE I ILP D R RTRV GTD N M+HG
Sbjct: 564 DASWEPGHRDCEAHGVRPEVHILYSQEVIPGILPGDSRCC*RTRVAGTDCNWMNHGTTRF 385
Query: 557 AENRLHPVARSSIVLPGVEDDSVRVPRLVIVVHEEWCVTCHLNNITVLLQTSEESSFSQR 736
AE LHPV RSS++LPGVEDDS+ +PRL++VV++E C+TCH+NNITVLLQ S+E S Q
Sbjct: 384 AEKLLHPVTRSSVLLPGVEDDSIWIPRLIVVVYKERCITCHMNNITVLLQPSKEGSLCQ* 205
Query: 737 SKKTASTRVTSP 772
+KK +ST ++SP
Sbjct: 204 TKKASSTCISSP 169
Score = 152 bits (327), Expect = 2e-036
Identities = 75/128 (58%), Positives = 88/128 (68%)
Frame = -2 / +3
Query: 773 LEK*RG*RQSSCFVG*SCFPHWSGEEQ*YCSDGKLRTTLRERQ*PNVEPGRYRLQLLAAL 594
+E * *R+ S F G C P+W+GEEQ*YCS GKL T L +RQ NVE YRLQLLA +
Sbjct: 168 VEN*CR*RKPSWFTGRGCLPYWAGEEQ*YCSYGKLCTALCKRQRSNVESRCYRLQLLATI 347
Query: 593 WNS*LLDADDFPRVKRRHDPSG*YQFPVLEFAGRVCDHVAGCRE*LPESEGRELRVGPR* 414
NS*LLDA+ FPR+ HD S QF +L F+ +C H+AG RE*LPES+G ELRVG R
Sbjct: 348 RNS*LLDAEVFPRI*WCHDSSNYNQFQLLWFSSSICYHLAGFRE*LPESKGCELRVGHRE 527
Query: 413 PHGLHERA 390
PH L RA
Sbjct: 528 PHNLCVRA 551
Score = 123 bits (264), Expect = 9e-028
Identities = 66/107 (61%), Positives = 72/107 (67%)
Frame = -1 / +2
Query: 696 TVILFRWQVTHHSS*TTMTKRGTRTLSSSTPGSTMELLATGCRRFSASQAAP*SIRLISV 517
TVILF WQV H S *TT KRG + LSSSTPG+ ELL TGCR FSA+ P* I+L SV
Sbjct: 245 TVILFIWQVMHRSL*TTTIKRGIQMLSSSTPGNNTELLVTGCRSFSANLVVP*FIQLQSV 424
Query: 516 PGTRVRWPRLRSRGRMQRIAS*E*RS*TSGRTPLASRSPRAGSGPAS 376
P T V L S GR+ I S*E*R *TSGRTP AS+S GS AS
Sbjct: 425 PATLVL*QHLLSPGRIPGITS*E*RM*TSGRTP*ASQSLCPGSQLAS 565
Score = 39.6 bits (80), Expect(2) = 1e-066
Identities = 17/29 (58%), Positives = 19/29 (65%)
Frame = -3 / +2
Query: 376 NALGSTATVLTSGNVMDENSFSNPNKVAP 290
NALGS AT LT +V DEN FS P + P
Sbjct: 566 NALGSNATGLTXQHVKDENFFSTPPRACP 652
Score = 36.3 bits (73), Expect(2) = 9e-051
Identities = 18/35 (51%), Positives = 21/35 (60%)
Frame = +3 / -2
Query: 291 GATLFGLLKEFSSMTLPDVRTVAVDPSALTLAPSP 395
G L G+LK+FSS T VR VA DPSA + P
Sbjct: 651 GHALGGVLKKFSSFTCWXVRPVAFDPSAFDASWEP 547
>gb|BI776606.2|BI776606 EBpi07_SQ001_B24_R pistil, 12 DPA, no treatment, cv Optic, EBpi07
Hordeum vulgare subsp. vulgare cDNA clone
EBpi07_SQ001_B24 5', mRNA sequence
Length = 453
Score = 227 bits (491), Expect = 4e-059
Identities = 91/149 (61%), Positives = 109/149 (73%)
Frame = -3 / +2
Query: 673 SYAPLFVNDNDQTWNPDAIVFNSWQHYGTPSYWMQTIFRESSGAMIHPVNIXXXXXXXXX 494
SYAPLF+N+ND+ W PDAIVFNSWQ YGTPSYWM T FRESSGA+IHP+ +
Sbjct: 5 SYAPLFLNENDRQWTPDAIVFNSWQQYGTPSYWMHTFFRESSGAVIHPMRLNSSYSGSLA 184
Query: 493 XXAITWQDAENSFLRVKVVNFGSDPVSLTVSTSGLGASVNALGSTATVLTSGNVMDENSF 314
AITW D+E+ FLR+K+VNFGS+ V+LT+S GL A VN S TVLTS NV+DEN+F
Sbjct: 185 ASAITWGDSEDIFLRIKIVNFGSNAVNLTLSAIGLQAGVNT*RSAVTVLTSDNVLDENTF 364
Query: 313 SNPNKVAPVKSQLSNAAEQMQVTLAPHSF 227
+P V P +S L NAAE+MQ L PHSF
Sbjct: 365 DDPRNVVPERSDLPNAAEEMQAMLVPHSF 451
Score = 194 bits (418), Expect = 5e-049
Identities = 97/150 (64%), Positives = 104/150 (69%)
Frame = +3 / -1
Query: 225 VKE*GASVTCICSAALLSWLFTGATLFGLLKEFSSMTLPDVRTVAVDPSALTLAPSPLVE 404
VKE*G S+ CI SAAL L +G TL G FSS TL DVRTV + LT A SP+ +
Sbjct: 453 VKE*GTSMACISSAALGRSLLSGTTLRGSSNVFSSNTLSDVRTVTAERHVLTPACSPIAD 274
Query: 405 TVRLTGSDPKFTTFTLRKLFSASCHVIADAASELEYRELILTGWIMAPLDSRKIVCIQ*L 584
VR T DPKFT F LRK+ S S VIADAA+E E EL L GWI APLDSRK VCIQ*L
Sbjct: 273 KVRFTAFDPKFTIFILRKISSLSPQVIADAANEPE*LELSLIGWITAPLDSRKNVCIQ*L 94
Query: 585 GVP*CCQELKTIASGFHVWSLSFTKSGA*L 674
GVP CCQELKTIASG H S SF KSGA*L
Sbjct: 93 GVPYCCQELKTIASGVHWRSFSFKKSGA*L 4
Score = 117 bits (250), Expect = 8e-026
Identities = 58/148 (39%), Positives = 84/148 (56%)
Frame = +2 / -3
Query: 227 EGVRSQRDLHLLRGVAQLAFHRRNLVRVTEGVLVHDVARREDGGG*SQRVDAGPEPARGD 406
E VR++ LHL + +A N+ V E VL+ + E+G *+ R+D +
Sbjct: 451 ERVRNKHGLHLFCSIG*VASFWHNVTWVIERVLIQHIVGCENGDS*ASRIDTSLQSDCR* 272
Query: 407 REANGVRPEVHDLHSQEAILCILPRDRRRGQRTRVPGTDINRMDHGAA*LAENRLHPVAR 586
E + + P+VH+L+ QE IL + P + R Q TRV G + +RMDH * E +HPVAR
Sbjct: 271 GEVHSI*PKVHNLYPQEDILTVSPGNCRCCQ*TRVAGIESHRMDHSTT*FTEKCMHPVAR 92
Query: 587 SSIVLPGVEDDSVRVPRLVIVVHEEWCV 670
SSI+LPGVED + P V+ + EEW +
Sbjct: 91 SSILLPGVEDYCIWGPLAVVFI*EEWSI 8
>gb|BF259719.2|BF259719 HVSMEf0020B07f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEf0020B07f, mRNA sequence
Length = 832
Score = 200 bits (431), Expect(2) = 2e-058
Identities = 80/120 (66%), Positives = 87/120 (72%)
Frame = -3 / +2
Query: 778 AVWRSDAGRGXXXXXXXXXXXLTGLEKNSDIVQMASYAPLFVNDNDQTWNPDAIVFNSWQ 599
AVWR+DAGRG LTGLEKNSDIV MASYAPLFVNDNDQTWNPDAIVFNSWQ
Sbjct: 227 AVWRTDAGRGSLLGSLAEAAFLTGLEKNSDIVHMASYAPLFVNDNDQTWNPDAIVFNSWQ 406
Query: 598 HYGTPSYWMQTIFRESSGAMIHPVNIXXXXXXXXXXXAITWQDAENSFLRVKVVNFGSDP 419
YGTPSYWMQ FRES GAMIHP+ I AITWQ++ N+FLR+K+ FG P
Sbjct: 407 QYGTPSYWMQKFFRESRGAMIHPITISSSYSGSLATSAITWQESGNNFLRIKMGTFGPTP 586
Score = 195 bits (420), Expect = 3e-049
Identities = 93/121 (76%), Positives = 98/121 (80%)
Frame = +3 / -2
Query: 417 TGSDPKFTTFTLRKLFSASCHVIADAASELEYRELILTGWIMAPLDSRKIVCIQ*LGVP* 596
+G PK F LRKLF SC VIA+ A E E ELI+ G IMAPLDSRK CIQ*LGVP
Sbjct: 588 SGVGPKVPIFILRKLFPDSCQVIAEVAKEPE*LELIVIG*IMAPLDSRKNFCIQ*LGVPY 409
Query: 597 CCQELKTIASGFHVWSLSFTKSGA*LAI*TISLFFSRPVRKAASANEARRLPLPASLLQT 776
CCQELKTIASGFHV SLSFTKSGA*LAI*TISLFFS PVRKAASA+E RRLPLPAS+L T
Sbjct: 408 CCQELKTIASGFHV*SLSFTKSGA*LAI*TISLFFSSPVRKAASASEPRRLPLPASVLHT 229
Query: 777 A 779
A
Sbjct: 228 A 226
Score = 154 bits (331), Expect = 5e-037
Identities = 67/116 (57%), Positives = 84/116 (72%)
Frame = +2 / -1
Query: 425 RPEVHDLHSQEAILCILPRDRRRGQRTRVPGTDINRMDHGAA*LAENRLHPVARSSIVLP 604
R E L+SQE I LP D R RTRV GTD N M+HG AE LHPV RSS++LP
Sbjct: 580 RTEGSHLYSQEVIPGFLPGDSRSC*RTRVAGTDCNWMNHGPPRFAEKLLHPVTRSSVLLP 401
Query: 605 GVEDDSVRVPRLVIVVHEEWCVTCHLNNITVLLQTSEESSFSQRSKKTASTRVTSP 772
GVEDDS+ +PRL++VV++E C+TCH+NNITVLLQ S+E S Q +KK +ST ++SP
Sbjct: 400 GVEDDSIWIPRLIVVVYKERCITCHMNNITVLLQPSKEGSLCQ*TKKASSTCISSP 233
Score = 127 bits (271), Expect = 1e-028
Identities = 63/115 (54%), Positives = 75/115 (65%)
Frame = -2 / +1
Query: 773 LEK*RG*RQSSCFVG*SCFPHWSGEEQ*YCSDGKLRTTLRERQ*PNVEPGRYRLQLLAAL 594
+E * *R+ S F G C P+W+GEEQ*YCS GKL T L +RQ NVE YRLQLLA +
Sbjct: 232 MEN*CR*RKPSWFTGRGCLPYWAGEEQ*YCSYGKLCTALCKRQRSNVESRCYRLQLLATI 411
Query: 593 WNS*LLDADDFPRVKRRHDPSG*YQFPVLEFAGRVCDHVAGCRE*LPESEGRELR 429
NS*LLDA+ FPR+ HD S QF +L F C H+A RE*LPE++ LR
Sbjct: 412 RNS*LLDAEVFPRI*GGHDSSNYNQFQLLWFFSNFCYHLARIRE*LPENKDGNLR 576
Score = 45.5 bits (93), Expect(2) = 2e-058
Identities = 21/41 (51%), Positives = 25/41 (60%)
Frame = -3 / +2
Query: 406 VSTSGLGASVNALGSTATVLTSGNVMDENSFSNPNKVAPVK 284
+ SGL AS+NALG T L S +V EN F NP +V P K
Sbjct: 596 IFVSGLQASINALGFNPTGLKSPHVKGENFFLNPTQVCPYK 718
>gb|AV930658.1|AV930658 AV930658 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp.
vulgare cDNA clone basd24j13 3', mRNA sequence
Length = 561
Score = 216 bits (466), Expect = 1e-055
Identities = 95/133 (71%), Positives = 106/133 (79%)
Frame = -3 / -1
Query: 574 MQTIFRESSGAMIHPVNIXXXXXXXXXXXAITWQDAENSFLRVKVVNFGSDPVSLTVSTS 395
MQ FRESSGAMIHP+ I AITWQD+ N+FLRVK+VNFGSD VSLT+S S
Sbjct: 558 MQKFFRESSGAMIHPITISSSYSGSLAASAITWQDSGNNFLRVKIVNFGSDTVSLTISVS 379
Query: 394 GLGASVNALGSTATVLTSGNVMDENSFSNPNKVAPVKSQLSNAAEQMQVTLAPHSFTAFD 215
GL AS+NALGS ATVLTS NV DENSFSNP KV PV SQL NAAEQMQVTLA HSF++FD
Sbjct: 378 GLQASINALGSNATVLTSSNVKDENSFSNPTKVVPVTSQLHNAAEQMQVTLAAHSFSSFD 199
Query: 214 LALAEPKLVAEI* 176
LALA+ +LVAE+*
Sbjct: 198 LALAQSELVAEM* 160
Score = 191 bits (412), Expect = 3e-048
Identities = 96/132 (72%), Positives = 98/132 (74%)
Frame = +3 / +2
Query: 177 HISATSLGSASARSKAVKE*GASVTCICSAALLSWLFTGATLFGLLKEFSSMTLPDVRTV 356
HISATS ASARS KE ASVTCICSAAL + L TG TL GLLKEFSS TL DVRTV
Sbjct: 161 HISATSSD*ASARSNEEKEWAASVTCICSAALCN*LVTGTTLVGLLKEFSSFTLLDVRTV 340
Query: 357 AVDPSALTLAPSPLVETVRLTGSDPKFTTFTLRKLFSASCHVIADAASELEYRELILTGW 536
A DPSAL LA SP E VRLT SDPKFT FTLRKLF SC VIADAA E E ELI+ G
Sbjct: 341 AFDPSALMLAWSPDTEIVRLTVSDPKFTIFTLRKLFPESCQVIADAAREPE*LELIVIG* 520
Query: 537 IMAPLDSRKIVC 572
IMAPLDSRK C
Sbjct: 521 IMAPLDSRKNFC 556
Score = 155 bits (332), Expect = 4e-037
Identities = 75/133 (56%), Positives = 89/133 (66%)
Frame = +2 / +1
Query: 176 SYLRHKLGLSQRQIEGGEGVRSQRDLHLLRGVAQLAFHRRNLVRVTEGVLVHDVARREDG 355
S+L KLGLS+R++E GEGV S+RDLHL RGV QL H +L VTE + + +A RE+
Sbjct: 160 SHLCDKLGLSKRKVERGEGVGSERDLHLFRGVMQLTCHGHDLGWVTERIFILYIAGRENS 339
Query: 356 GG*SQRVDAGPEPARGDREANGVRPEVHDLHSQEAILCILPRDRRRGQRTRVPGTDINRM 535
* QRVDA EP D EA+GVRPEVH+L+SQE I ILP D R RTRV GTD N M
Sbjct: 340 SV*PQRVDASLEPGHRDCEAHGVRPEVHNLYSQEVIPGILPGDSRCC*RTRVAGTDCNWM 519
Query: 536 DHGAA*LAENRLH 574
+HG AE LH
Sbjct: 520 NHGTTRFAEKLLH 558
Score = 124 bits (266), Expect = 5e-028
Identities = 65/132 (49%), Positives = 79/132 (59%)
Frame = -2 / -3
Query: 572 ADDFPRVKRRHDPSG*YQFPVLEFAGRVCDHVAGCRE*LPESEGRELRVGPR*PHGLHER 393
A+ FPR+ HD S QF +L F+ +C H+AG RE*LPES+ ELRVG R PH L R
Sbjct: 556 AEVFPRI*WCHDSSNYNQFQLLWFSSSICYHLAGFRE*LPESKDCELRVGHREPHNLCVR 377
Query: 392 ARGQRQRAGINRHRPHVWQRHGRELLQ*PEQGCAGEKPAEQRRGADAGHAGSSLLHRLRS 213
A G QRAG+ R+ HV Q G + Q*P QG A +K RRG DAGHA LL +R
Sbjct: 376 APG*HQRAGVKRYCSHVQQCKG*KFFQ*PNQGRARDKSVA*RRGTDAGHARCPLLLLVRP 197
Query: 212 GAG*AQACGGDM 177
A +AC D+
Sbjct: 196 CACSVRACRRDV 161
Score = 119 bits (254), Expect = 2e-026
Identities = 72/131 (54%), Positives = 81/131 (61%)
Frame = -1 / -2
Query: 573 CRRFSASQAAP*SIRLISVPGTRVRWPRLRSRGRMQRIAS*E*RS*TSGRTPLASRSPRA 394
CR FSA+ P* I+L SVP T V L S GR+ I S*E*R *TSGRTP AS+S
Sbjct: 557 CRSFSANLVVP*FIQLQSVPATLVL*QHLLSPGRIPGITS*E*RL*TSGRTP*ASQSLCP 378
Query: 393 GSGPASTRWDQPPPSSRLATSWTRTPSVTRTRLRR*KAS*ATPRSRCRSRWLLTPSPPSI 214
GS ASTRW Q SR A + SVT+ R *+ S TPR+RCRSR L TPSP S
Sbjct: 377 GSRLASTRWGQTLLFSRPAM*RMKILSVTQPRSCP*QVSCITPRNRCRSRSLPTPSPRST 198
Query: 213 WRWLSPSLWRR 181
R LSPSL +R
Sbjct: 197 LRLLSPSLSQR 165
>gb|BU981962.1|BU981962 HA25B23r HA Hordeum vulgare subsp. vulgare cDNA clone HA25B23
5-PRIME, mRNA sequence
Length = 558
Score = 214 bits (461), Expect = 6e-055
Identities = 88/141 (62%), Positives = 103/141 (73%)
Frame = -3 / +1
Query: 628 PDAIVFNSWQHYGTPSYWMQTIFRESSGAMIHPVNIXXXXXXXXXXXAITWQDAENSFLR 449
PDAIVFNSWQ YGTPSYWMQT FRESSGA+IHP+ + AITW D E+ FLR
Sbjct: 10 PDAIVFNSWQQYGTPSYWMQTFFRESSGAVIHPMRLNSSYSGSLAASAITWGDNEDIFLR 189
Query: 448 VKVVNFGSDPVSLTVSTSGLGASVNALGSTATVLTSGNVMDENSFSNPNKVAPVKSQLSN 269
+K+VNFGS+ V+LT+S GL A VN S TVLTS NV+DEN+F +P V P +S L N
Sbjct: 190 IKIVNFGSNAVNLTLSAIGLQAGVNTSRSAVTVLTSDNVLDENTFDDPRNVVPERSDLPN 369
Query: 268 AAEQMQVTLAPHSFTAFDLAL 206
AAE+MQ L PHSFT+FDLAL
Sbjct: 370 AAEEMQAMLVPHSFTSFDLAL 432
Score = 182 bits (393), Expect = 1e-045
Identities = 90/140 (64%), Positives = 97/140 (69%)
Frame = +3 / -2
Query: 210 ARSKAVKE*GASVTCICSAALLSWLFTGATLFGLLKEFSSMTLPDVRTVAVDPSALTLAP 389
ARS VKE*G S+ CI SAAL L +G TL G FSS TL DVRTV + LT A
Sbjct: 428 ARSNEVKE*GTSMACISSAALGRSLLSGTTLRGSSNVFSSNTLSDVRTVTAERDVLTPAC 249
Query: 390 SPLVETVRLTGSDPKFTTFTLRKLFSASCHVIADAASELEYRELILTGWIMAPLDSRKIV 569
SP+ + VR T DPKFT F LRK+ S S VIADAA+E E EL L GWI APLDSRK V
Sbjct: 248 SPIADKVRFTAFDPKFTIFILRKISSLSPQVIADAANEPE*LELSLIGWITAPLDSRKNV 69
Query: 570 CIQ*LGVP*CCQELKTIASG 629
CIQ*LGVP CCQELKTIASG
Sbjct: 68 CIQ*LGVPYCCQELKTIASG 9
Score = 108 bits (231), Expect = 3e-023
Identities = 57/139 (41%), Positives = 79/139 (56%)
Frame = +2 / -1
Query: 200 LSQRQIEGGEGVRSQRDLHLLRGVAQLAFHRRNLVRVTEGVLVHDVARREDGGG*SQRVD 379
L Q QI+ E VR++ LHL + + N+ V E VL+ + E+G *+ R+D
Sbjct: 438 LIQSQIK*SERVRNKHGLHLFCSIG*VTSFWHNVTWVIERVLIQHIVGCENGDS*A*RID 259
Query: 380 AGPEPARGDREANGVRPEVHDLHSQEAILCILPRDRRRGQRTRVPGTDINRMDHGAA*LA 559
+ E + + P+VH+L+ QE IL + P + R Q TRV G + +RMDH *
Sbjct: 258 TSLQSDCR*GEVHSI*PKVHNLYPQEDILIVSPGNCRCCQ*TRVAGIESHRMDHSTT*FT 79
Query: 560 ENRLHPVARSSIVLPGVED 616
E LHPVARSSI+LPGVED
Sbjct: 78 EKCLHPVARSSILLPGVED 22
>gb|BF631424.2|BF631424 HVSMEb0015O10f Hordeum vulgare seedling shoot EST library
HVcDNA0002 (Dehydration stress) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEb0015O10f, mRNA sequence
Length = 762
Score = 213 bits (459), Expect = 1e-054
Identities = 90/152 (59%), Positives = 106/152 (69%)
Frame = -3 / +2
Query: 655 VNDNDQTWNPDAIVFNSWQHYGTPSYWMQTIFRESSGAMIHPVNIXXXXXXXXXXXAITW 476
VNDNDQTWNPDA+VFNSWQ YGTPSYWMQ FRESSGAMIHP+ I A+TW
Sbjct: 89 VNDNDQTWNPDAVVFNSWQQYGTPSYWMQKFFRESSGAMIHPIAISSSYSGSLTASAVTW 268
Query: 475 QDAENSFLRVKVVNFGSDPVSLTVSTSGLGASVNALGSTATVLTSGNVMDENSFSNPNKV 296
QD+ N+ LRVK+ N GSD SLT+ +GL +NALGS ATVLT + DENS +P K
Sbjct: 269 QDSGNN*LRVKIEN*GSDTESLTICVTGLQTDINALGSNATVLTCNSEEDENSLKDPTKD 448
Query: 295 APVKSQLSNAAEQMQVTLAPHSFTAFDLALAE 200
P SQ+ +A +QM VTLA HSF +L LA+
Sbjct: 449 MPGTSQVHSARKQMHVTLATHSFC*KNLRLAQ 544
Score = 177 bits (380), Expect = 9e-044
Identities = 93/151 (61%), Positives = 100/151 (66%)
Frame = +3 / -1
Query: 204 ASARSKAVKE*GASVTCICSAALLSWLFTGATLFGLLKEFSSMTLPDVRTVAVDPSALTL 383
AS R KE ASVTCIC AL + L G +L G K FSS +L V TVA DPSAL
Sbjct: 540 ASLRFF*QKEWVASVTCICFLALCT*LVPGMSLVGSFKLFSSSSLLHVSTVAFDPSALMS 361
Query: 384 APSPLVETVRLTGSDPKFTTFTLRKLFSASCHVIADAASELEYRELILTGWIMAPLDSRK 563
SP+ + VRL+ SDP F+ FTL LF SC V ADA E E ELI G IMAPLDSRK
Sbjct: 360 VWSPVTQIVRLSVSDP*FSIFTLS*LFPESCQVTADAVREPE*LELIAIG*IMAPLDSRK 181
Query: 564 IVCIQ*LGVP*CCQELKTIASGFHVWSLSFT 656
CIQ*LGVP CCQELKT ASGFHV SLSFT
Sbjct: 180 NFCIQ*LGVPYCCQELKTTASGFHV*SLSFT 88
Score = 116 bits (249), Expect(2) = 1e-027
Identities = 55/96 (57%), Positives = 65/96 (67%)
Frame = +2 / -3
Query: 368 QRVDAGPEPARGDREANGVRPEVHDLHSQEAILCILPRDRRRGQRTRVPGTDINRMDHGA 547
Q VD EP D EA GVRP V +L+SQ I ILP D R RTRV GTD N M+HG
Sbjct: 376 QCVDVSLEPGHTDCEALGVRPLVLNLYSQLVIPGILPGDSRCC*RTRVAGTDCNWMNHGT 197
Query: 548 A*LAENRLHPVARSSIVLPGVEDDSVRVPRLVIVVH 655
AE LHPV RSS++LPGVEDDS+ +PRL++VV+
Sbjct: 196 TRFAEKLLHPVTRSSVLLPGVEDDSIWIPRLIVVVY 89
Score = 114 bits (243), Expect = 7e-025
Identities = 65/142 (45%), Positives = 83/142 (58%)
Frame = -2 / +1
Query: 653 ERQ*PNVEPGRYRLQLLAALWNS*LLDADDFPRVKRRHDPSG*YQFPVLEFAGRVCDHVA 474
+RQ NVE RLQLLA + NS*LLDA FPR+ HD S QF +L F+ +C H+A
Sbjct: 91 KRQRSNVESRCCRLQLLATIRNS*LLDAKVFPRI*WCHDSSNCNQFQLLWFSNSICCHLA 270
Query: 473 GCRE*LPESEGRELRVGPR*PHGLHERARGQRQRAGINRHRPHVWQRHGRELLQ*PEQGC 294
G RE*L ES+ EL VG R PH L +RA QR G+ R+ H+ Q G + + P Q
Sbjct: 271 GFRE*LAESKD*ELGVGHREPHNLCDRAPD*HQRTGVKRYCTHMQQ*RG*K*FERPNQRH 450
Query: 293 AGEKPAEQRRGADAGHAGSSLL 228
A +K + R+ +A HA LL
Sbjct: 451 ARDKSST*RQKTNACHARYPLL 516
Score = 103 bits (219), Expect = 1e-021
Identities = 55/98 (56%), Positives = 62/98 (63%)
Frame = -1 / +3
Query: 654 *TTMTKRGTRTLSSSTPGSTMELLATGCRRFSASQAAP*SIRLISVPGTRVRWPRLRSRG 475
*TT KRG + LSSSTPG+ ELL TGC+ FSA+ P* I+L SVP T V L S G
Sbjct: 90 *TTTIKRGIQMLSSSTPGNNTELLVTGCKSFSANLVVP*FIQLQSVPATLVL*QHLLSPG 269
Query: 474 RMQRIAS*E*RS*TSGRTPLASRSPRAGSGPASTRWDQ 361
R+ I S*E*R T GRTP AS+S GS ST W Q
Sbjct: 270 RIPGITS*E*RLRTRGRTPRASQSV*PGSRLTSTHWGQ 383
Score = 26.3 bits (51), Expect(2) = 1e-027
Identities = 10/18 (55%), Positives = 12/18 (66%)
Frame = +2 / -3
Query: 227 EGVRSQRDLHLLRGVAQL 280
EGV S+RD+HL G L
Sbjct: 517 EGVGSERDMHLFSGAMYL 464
>gb|CA028489.1|CA028489 HZ62C12r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ62C12
5-PRIME, mRNA sequence
Length = 557
Score = 199 bits (429), Expect = 2e-050
Identities = 96/140 (68%), Positives = 104/140 (74%)
Frame = +3 / -1
Query: 345 VRTVAVDPSALTLAPSPLVETVRLTGSDPKFTTFTLRKLFSASCHVIADAASELEYRELI 524
VRTV + LT A SP+ + VR T DPKFT F LRK+ S S VIADAA+E E EL
Sbjct: 557 VRTVTAERDVLTPACSPIADKVRFTAFDPKFTIFILRKISSLSPQVIADAANEPE*LELS 378
Query: 525 LTGWIMAPLDSRKIVCIQ*LGVP*CCQELKTIASGFHVWSLSFTKSGA*LAI*TISLFFS 704
L GWI APLDSRK VCIQ*LGVP CCQELKTIASG H S SFTKSGA*LA+ TISLF S
Sbjct: 377 LIGWITAPLDSRKNVCIQ*LGVPYCCQELKTIASGVHWRSFSFTKSGA*LAMWTISLFTS 198
Query: 705 RPVRKAASANEARRLPLPAS 764
P+R AASANEARR+PL S
Sbjct: 197 NPMRNAASANEARRVPLLVS 138
Score = 196 bits (422), Expect = 1e-049
Identities = 82/139 (58%), Positives = 94/139 (67%)
Frame = -3 / +1
Query: 763 DAGRGXXXXXXXXXXXLTGLEKNSDIVQMASYAPLFVNDNDQTWNPDAIVFNSWQHYGTP 584
D +G L GLE NSDIV MASYAPLFVN+ND+ W PDAIVFNSWQ YGTP
Sbjct: 139 DTSKGTLLASLAEAAFLIGLEVNSDIVHMASYAPLFVNENDRQWTPDAIVFNSWQQYGTP 318
Query: 583 SYWMQTIFRESSGAMIHPVNIXXXXXXXXXXXAITWQDAENSFLRVKVVNFGSDPVSLTV 404
SYWMQT FRESSGA+IHP+ + AITW D E+ FLR+K+VNFGS+ V+LT+
Sbjct: 319 SYWMQTFFRESSGAVIHPMRLNSSYSGSLAASAITWGDNEDIFLRIKIVNFGSNAVNLTL 498
Query: 403 STSGLGASVNALGSTATVL 347
S GL A VN S TVL
Sbjct: 499 SAIGLQAGVNTSRSAVTVL 555
Score = 117 bits (251), Expect = 6e-026
Identities = 57/133 (42%), Positives = 82/133 (61%)
Frame = +2 / -3
Query: 347 EDGGG*SQRVDAGPEPARGDREANGVRPEVHDLHSQEAILCILPRDRRRGQRTRVPGTDI 526
E+G *+ R+D + E + + P+VH+L+ QE IL + P + R Q TRV G +
Sbjct: 555 ENGDS*A*RIDTSLQSDCR*GEVHSI*PKVHNLYPQEDILIVSPGNCRCCQ*TRVAGIES 376
Query: 527 NRMDHGAA*LAENRLHPVARSSIVLPGVEDDSVRVPRLVIVVHEEWCVTCHLNNITVLLQ 706
+RMDH * E LHPVARSSI+LPGVED + P V+ ++EEW + H+++IT+
Sbjct: 375 HRMDHSTT*FTEKCLHPVARSSILLPGVEDYCIWGPLAVVFIYEEWSIARHVDDITIHF* 196
Query: 707 TSEESSFSQRSKK 745
++EE SF Q S K
Sbjct: 195 SNEECSFCQ*S*K 157
Score = 105 bits (225), Expect = 2e-022
Identities = 58/133 (43%), Positives = 75/133 (56%)
Frame = -2 / +3
Query: 743 SCFVG*SCFPHWSGEEQ*YCSDGKLRTTLRERQ*PNVEPGRYRLQLLAALWNS*LLDADD 564
S F+G SC PHW E *Y G+L +TLR+ + P V+P LQLLA +WNS*LLDAD
Sbjct: 159 SSFIGRSCIPHWIRSE**YRPHGELCSTLRK*KRPPVDPRCNSLQLLATVWNS*LLDADI 338
Query: 563 FPRVKRRHDPSG*YQFPVLEFAGRVCDHVAGCRE*LPESEGRELRVGPR*PHGLHERARG 384
FP +K DPS QF +L F G +C+++ LPE + EL V PH + R
Sbjct: 339 FP*IKWCCDPSYETQFQLLWFIGSICNYLGRQ*GYLPEDKDCELWVKCCEPHLICNRTAS 518
Query: 383 QRQRAGINRHRPH 345
Q ++ HR H
Sbjct: 519 WCQYVTLSCHRSH 557
>gb|BJ464212.1|BJ464212 BJ464212 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags33f17 5', mRNA sequence
Length = 591
Score = 195 bits (421), Expect = 2e-049
Identities = 79/111 (71%), Positives = 83/111 (74%)
Frame = -3 / +1
Query: 778 AVWRSDAGRGXXXXXXXXXXXLTGLEKNSDIVQMASYAPLFVNDNDQTWNPDAIVFNSWQ 599
AVWR+DAGRG LTGLEKNSDIV MASYAPLFVNDNDQTWNPDAIVFNSWQ
Sbjct: 259 AVWRTDAGRGSLLGSLAEAAFLTGLEKNSDIVHMASYAPLFVNDNDQTWNPDAIVFNSWQ 438
Query: 598 HYGTPSYWMQTIFRESSGAMIHPVNIXXXXXXXXXXXAITWQDAENSFLRV 446
YGTPSYWMQ FRESSGAMIHP+ I AITWQD+ N+FLRV
Sbjct: 439 QYGTPSYWMQKFFRESSGAMIHPITISSSYSGSLAASAITWQDSGNNFLRV 591
Score = 193 bits (415), Expect = 1e-048
Identities = 92/111 (82%), Positives = 95/111 (85%)
Frame = +3 / -2
Query: 447 TLRKLFSASCHVIADAASELEYRELILTGWIMAPLDSRKIVCIQ*LGVP*CCQELKTIAS 626
TLRKLF SC VIADAA E E ELI+ G IMAPLDSRK CIQ*LGVP CCQELKTIAS
Sbjct: 590 TLRKLFPESCQVIADAAREPE*LELIVIG*IMAPLDSRKNFCIQ*LGVPYCCQELKTIAS 411
Query: 627 GFHVWSLSFTKSGA*LAI*TISLFFSRPVRKAASANEARRLPLPASLLQTA 779
GFHV SLSFTKSGA*LAI*TISLFFS PVRKAASA+E RRLPLPAS+L TA
Sbjct: 410 GFHV*SLSFTKSGA*LAI*TISLFFSSPVRKAASASEPRRLPLPASVLHTA 258
Score = 152 bits (327), Expect = 2e-036
Identities = 65/109 (59%), Positives = 82/109 (75%)
Frame = +2 / -1
Query: 446 HSQEAILCILPRDRRRGQRTRVPGTDINRMDHGAA*LAENRLHPVARSSIVLPGVEDDSV 625
+SQE I ILP D R RTRV GTD N M+HG AE LHPV RSS++LPGVEDDS+
Sbjct: 591 YSQEVIPGILPGDSRCC*RTRVAGTDCNWMNHGTTRFAEKLLHPVTRSSVLLPGVEDDSI 412
Query: 626 RVPRLVIVVHEEWCVTCHLNNITVLLQTSEESSFSQRSKKTASTRVTSP 772
+PRL++VV++E C+TCH+NNITVLLQ S+E S Q +KK +ST ++SP
Sbjct: 411 WIPRLIVVVYKERCITCHMNNITVLLQPSKEGSLCQ*TKKASSTCISSP 265
Score = 130 bits (278), Expect = 1e-029
Identities = 63/109 (57%), Positives = 75/109 (68%)
Frame = -2 / +3
Query: 773 LEK*RG*RQSSCFVG*SCFPHWSGEEQ*YCSDGKLRTTLRERQ*PNVEPGRYRLQLLAAL 594
+E * *R+ S F G C P+W+GEEQ*YCS GKL T L +RQ NVE YRLQLLA +
Sbjct: 264 MEN*CR*RKPSWFTGRGCLPYWAGEEQ*YCSYGKLCTALCKRQRSNVESRCYRLQLLATI 443
Query: 593 WNS*LLDADDFPRVKRRHDPSG*YQFPVLEFAGRVCDHVAGCRE*LPES 447
NS*LLDA+ FPR+ HD S QF +L F+ +C H+AG RE*LPES
Sbjct: 444 RNS*LLDAEVFPRI*WCHDSSNYNQFQLLWFSSSICYHLAGFRE*LPES 590
>gb|BE420972.1|BE420972 HWM004.E01 ITEC HWM Barley Leaf Library Hordeum vulgare subsp.
vulgare cDNA clone HWM004.E01, mRNA sequence
Length = 1149
Score = 143 bits (306), Expect(2) = 4e-047
Identities = 58/112 (51%), Positives = 71/112 (63%)
Frame = -3 / +1
Query: 778 AVWRSDAGRGXXXXXXXXXXXLTGLEKNSDIVQMASYAPLFVNDNDQTWNPDAIVFNSWQ 599
AV +DAG+G L GLEKNSD+V+MAS APLFVNDND+ W+PDAIVFNSWQ
Sbjct: 559 AVTGNDAGKGTLVAALAEAAFLVGLEKNSDVVEMASCAPLFVNDNDRKWSPDAIVFNSWQ 738
Query: 598 HYGTPSYWMQTIFRESSGAMIHPVNIXXXXXXXXXXXAITWQDAENSFLRVK 443
HYG P+YWM F++SSGA HP + AITWQ ++ +K
Sbjct: 739 HYGCPNYWMLHFFKDSSGATFHPTTMQISNYDQMVASAITWQSPKDKSTYLK 894
Score = 108 bits (230), Expect(2) = 2e-032
Identities = 53/86 (61%), Positives = 61/86 (70%)
Frame = +3 / -2
Query: 522 ILTGWIMAPLDSRKIVCIQ*LGVP*CCQELKTIASGFHVWSLSFTKSGA*LAI*TISLFF 701
++ G +APL+S K IQ* G P*CC EL T+ASG H+ SLSFTKSGA LAI T SLFF
Sbjct: 815 MVVG*KVAPLESLKKCSIQ*FGHP*CCHELNTMASGLHLRSLSFTKSGAQLAISTTSLFF 636
Query: 702 SRPVRKAASANEARRLPLPASLLQTA 779
S P R AASA+ A +PLPAS TA
Sbjct: 635 SNPTRNAASASAATSVPLPASFPVTA 558
Score = 65.2 bits (136), Expect(2) = 4e-047
Identities = 28/62 (45%), Positives = 42/62 (67%)
Frame = -3 / +1
Query: 466 ENSFLRVKVVNFGSDPVSLTVSTSGLGASVNALGSTATVLTSGNVMDENSFSNPNKVAPV 287
++++L+ KVVNF V L ++ +GL + + + GST TVLT ++ENS S+P KVAPV
Sbjct: 877 KSTYLKNKVVNFRXQAVDLNITVTGLXSGIKSSGSTKTVLTFXAPVEENSSSHPQKVAPV 1056
Query: 286 KS 281
S
Sbjct: 1057 XS 1062
Score = 50.6 bits (104), Expect(2) = 2e-032
Identities = 26/58 (44%), Positives = 32/58 (55%)
Frame = +3 / -2
Query: 282 LFTGATLFGLLKEFSSMTLPDVRTVAVDPSALTLAPSPLVETVRLTGSDPKFTTFTLR 455
L TGAT +G L+EFSS +V TV V+P L SP+ +R T KFTT R
Sbjct: 1061 LXTGATFWGWLEEFSSTGAXNVSTVFVEPELLMPLXSPVTVMLRSTACXRKFTTLFFR 888
>gb|BU971681.1|BU971681 HB19F12r BC Hordeum vulgare subsp. vulgare cDNA clone HB19F12
5-PRIME, mRNA sequence
Length = 556
Score = 183 bits (395), Expect = 8e-046
Identities = 80/103 (77%), Positives = 90/103 (87%)
Frame = -3 / +2
Query: 484 ITWQDAENSFLRVKVVNFGSDPVSLTVSTSGLGASVNALGSTATVLTSGNVMDENSFSNP 305
ITWQD+ N+FLRVK+VNFGSD VSLT+S SGL AS+NALGS ATVLTS NV DENSFSNP
Sbjct: 62 ITWQDSGNNFLRVKIVNFGSDTVSLTISVSGLQASINALGSNATVLTSSNVKDENSFSNP 241
Query: 304 NKVAPVKSQLSNAAEQMQVTLAPHSFTAFDLALAEPKLVAEI* 176
KV PV SQL NAAEQMQVTLA HSF++FDLALA+ +LVAE+*
Sbjct: 242 TKVVPVTSQLHNAAEQMQVTLAAHSFSSFDLALAQSELVAEM* 370
Score = 162 bits (348), Expect = 2e-039
Identities = 80/107 (74%), Positives = 81/107 (75%)
Frame = +3 / -2
Query: 177 HISATSLGSASARSKAVKE*GASVTCICSAALLSWLFTGATLFGLLKEFSSMTLPDVRTV 356
HISATS ASARS KE ASVTCICSAAL + L TG TL GLLKEFSS TL DVRTV
Sbjct: 369 HISATSSD*ASARSNEEKEWAASVTCICSAALCN*LVTGTTLVGLLKEFSSFTLLDVRTV 190
Query: 357 AVDPSALTLAPSPLVETVRLTGSDPKFTTFTLRKLFSASCHVIADAA 497
A DPSAL LA SP E VRLT SDPKFT FTLRKLF SC VIADAA
Sbjct: 189 AFDPSALMLAWSPDTEIVRLTVSDPKFTIFTLRKLFPESCQVIADAA 49
Score = 126 bits (270), Expect = 1e-028
Identities = 60/105 (57%), Positives = 73/105 (69%)
Frame = +2 / -1
Query: 176 SYLRHKLGLSQRQIEGGEGVRSQRDLHLLRGVAQLAFHRRNLVRVTEGVLVHDVARREDG 355
S+L KLGLS+R++E GEGV S+RDLHL RGV QL H +L VTE + + +A RE+
Sbjct: 370 SHLCDKLGLSKRKVERGEGVGSERDLHLFRGVMQLTCHGHDLGWVTERIFILYIAGRENS 191
Query: 356 GG*SQRVDAGPEPARGDREANGVRPEVHDLHSQEAILCILPRDRR 490
* QRVDA EP D EA+GVRPEVH+L+SQE I ILP D R
Sbjct: 190 SV*PQRVDASLEPGHRDCEAHGVRPEVHNLYSQEVIPGILPGDSR 56
Score = 105 bits (223), Expect = 4e-022
Identities = 54/105 (51%), Positives = 64/105 (60%)
Frame = -2 / +1
Query: 491 VCDHVAGCRE*LPESEGRELRVGPR*PHGLHERARGQRQRAGINRHRPHVWQRHGRELLQ 312
+C H+AG RE*LPES+ ELRVG R PH L RA G QRAG+ R+ HV Q G + Q
Sbjct: 55 ICYHLAGFRE*LPESKDCELRVGHREPHNLCVRAPG*HQRAGVKRYCSHVQQCKG*KFFQ 234
Query: 311 *PEQGCAGEKPAEQRRGADAGHAGSSLLHRLRSGAG*AQACGGDM 177
*P QG A +K RRG DAGHA LL +R A +AC D+
Sbjct: 235 *PNQGRARDKSVA*RRGTDAGHARCPLLLLVRPCACSVRACRRDV 369
>gb|BU988298.1|BU988298 HF17D19r HF Hordeum vulgare subsp. vulgare cDNA clone HF17D19
5-PRIME, mRNA sequence
Length = 638
Score = 174 bits (375), Expect = 4e-043
Identities = 84/100 (84%), Positives = 87/100 (87%)
Frame = +3 / -1
Query: 480 VIADAASELEYRELILTGWIMAPLDSRKIVCIQ*LGVP*CCQELKTIASGFHVWSLSFTK 659
VIADAA E E ELI+ G IMAPLDSRK CIQ*LGVP CCQELKTIASGFHV SLSFTK
Sbjct: 635 VIADAAREPE*LELIVIG*IMAPLDSRKNFCIQ*LGVPYCCQELKTIASGFHV*SLSFTK 456
Query: 660 SGA*LAI*TISLFFSRPVRKAASANEARRLPLPASLLQTA 779
SGA*LAI*TISLFFS PVRKAASA+E RRLPLPAS+L TA
Sbjct: 455 SGA*LAI*TISLFFSSPVRKAASASEPRRLPLPASVLHTA 336
Score = 174 bits (374), Expect = 6e-043
Identities = 71/100 (71%), Positives = 73/100 (73%)
Frame = -3 / +1
Query: 778 AVWRSDAGRGXXXXXXXXXXXLTGLEKNSDIVQMASYAPLFVNDNDQTWNPDAIVFNSWQ 599
AVWR+DAGRG LTGLEKNSDIV MASYAPLFVNDNDQTWNPDAIVFNSWQ
Sbjct: 337 AVWRTDAGRGSLLGSLAEAAFLTGLEKNSDIVHMASYAPLFVNDNDQTWNPDAIVFNSWQ 516
Query: 598 HYGTPSYWMQTIFRESSGAMIHPVNIXXXXXXXXXXXAIT 479
YGTPSYWMQ FRESSGAMIHP+ I AIT
Sbjct: 517 QYGTPSYWMQKFFRESSGAMIHPITISSSYSGSLAASAIT 636
Score = 140 bits (300), Expect = 1e-032
Identities = 56/91 (61%), Positives = 72/91 (79%)
Frame = +2 / -3
Query: 500 RTRVPGTDINRMDHGAA*LAENRLHPVARSSIVLPGVEDDSVRVPRLVIVVHEEWCVTCH 679
RTRV GTD N M+HG AE LHPV RSS++LPGVEDDS+ +PRL++VV++E C+TCH
Sbjct: 615 RTRVAGTDCNWMNHGTTRFAEKLLHPVTRSSVLLPGVEDDSIWIPRLIVVVYKERCITCH 436
Query: 680 LNNITVLLQTSEESSFSQRSKKTASTRVTSP 772
+NNITVLLQ S+E S Q +KK +ST ++SP
Sbjct: 435 MNNITVLLQPSKEGSLCQ*TKKASSTCISSP 343
Score = 112 bits (239), Expect = 3e-024
Identities = 54/99 (54%), Positives = 66/99 (66%)
Frame = -2 / +3
Query: 773 LEK*RG*RQSSCFVG*SCFPHWSGEEQ*YCSDGKLRTTLRERQ*PNVEPGRYRLQLLAAL 594
+E * *R+ S F G C P+W+GEEQ*YCS GKL T L +RQ NVE YRLQLLA +
Sbjct: 342 MEN*CR*RKPSWFTGRGCLPYWAGEEQ*YCSYGKLCTALCKRQRSNVESRCYRLQLLATI 521
Query: 593 WNS*LLDADDFPRVKRRHDPSG*YQFPVLEFAGRVCDHV 477
NS*LLDA+ FPR+ HD S QF +L F+ +C H+
Sbjct: 522 RNS*LLDAEVFPRI*WCHDSSNYNQFQLLWFSSSICYHL 638
>gb|AV925177.1|AV925177 AV925177 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp.
vulgare cDNA clone basd22b16 5', mRNA sequence
Length = 639
Score = 165 bits (354), Expect = 3e-040
Identities = 66/82 (80%), Positives = 67/82 (81%)
Frame = -3 / +1
Query: 778 AVWRSDAGRGXXXXXXXXXXXLTGLEKNSDIVQMASYAPLFVNDNDQTWNPDAIVFNSWQ 599
AVWR+DAGRG LTGLEKNSDIV MASYAPLFVNDNDQTWNPDAIVFNSWQ
Sbjct: 394 AVWRTDAGRGSLLGSLAEAAFLTGLEKNSDIVHMASYAPLFVNDNDQTWNPDAIVFNSWQ 573
Query: 598 HYGTPSYWMQTIFRESSGAMIH 533
YGTPSYWMQ FRESSGAMIH
Sbjct: 574 QYGTPSYWMQKFFRESSGAMIH 639
Score = 155 bits (334), Expect = 2e-037
Identities = 72/81 (88%), Positives = 74/81 (91%)
Frame = +3 / -2
Query: 537 IMAPLDSRKIVCIQ*LGVP*CCQELKTIASGFHVWSLSFTKSGA*LAI*TISLFFSRPVR 716
IMAPLDSRK CIQ*LGVP CCQELKTIASGFHV SLSFTKSGA*LAI*TISLFFS PVR
Sbjct: 635 IMAPLDSRKNFCIQ*LGVPYCCQELKTIASGFHV*SLSFTKSGA*LAI*TISLFFSSPVR 456
Query: 717 KAASANEARRLPLPASLLQTA 779
KAASA+E RRLPLPAS+L TA
Sbjct: 455 KAASASEPRRLPLPASVLHTA 393
Score = 123 bits (263), Expect = 1e-027
Identities = 48/80 (60%), Positives = 64/80 (80%)
Frame = +2 / -1
Query: 533 MDHGAA*LAENRLHPVARSSIVLPGVEDDSVRVPRLVIVVHEEWCVTCHLNNITVLLQTS 712
M+HG AE LHPV RSS++LPGVEDDS+ +PRL++VV++E C+TCH+NNITVLLQ S
Sbjct: 639 MNHGTTRFAEKLLHPVTRSSVLLPGVEDDSIWIPRLIVVVYKERCITCHMNNITVLLQPS 460
Query: 713 EESSFSQRSKKTASTRVTSP 772
+E S Q +KK +ST ++SP
Sbjct: 459 KEGSLCQ*TKKASSTCISSP 400
>gb|BF267850.2|BF267850 HV_CEa0019B08f Hordeum vulgare seedling green leaf EST library
HVcDNA0004 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEa0019B08f, mRNA sequence
Length = 769
Score = 146 bits (314), Expect(2) = 1e-036
Identities = 67/140 (47%), Positives = 79/140 (56%)
Frame = -3 / +2
Query: 778 AVWRSDAGRGXXXXXXXXXXXLTGLEKNSDIVQMASYAPLFVNDNDQTWNPDAIVFNSWQ 599
AVWR+DAGRG LTGL+KNSDIV M S+APLF + DQTWN DAI N WQ
Sbjct: 227 AVWRTDAGRGSLLGSLAEADFLTGLDKNSDIVHMGSHAPLFGDHIDQTWNTDAIRLNYWQ 406
Query: 598 HYGTPSYWMQTIFRESSGAMIHPVNIXXXXXXXXXXXAITWQDAENSFLRVKVVNFGSDP 419
YGTPS WM+ RESSGAMIHP+ I AITW D+ N+ L ++ P
Sbjct: 407 RYGTPSTWMRRFLRESSGAMIHPITISFSYSGAVAAFAITWHDSGNNLLTGRLGTSSRAP 586
Query: 418 VSLTVSTSGLGASVNALGST 359
+L +G LG T
Sbjct: 587 *ALQYLRAGSRLP*ARLGHT 646
Score = 135 bits (290), Expect(2) = 3e-039
Identities = 70/108 (64%), Positives = 81/108 (75%)
Frame = +3 / -2
Query: 456 KLFSASCHVIADAASELEYRELILTGWIMAPLDSRKIVCIQ*LGVP*CCQELKTIASGFH 635
KLF SC VIA+AA+ E +L++ G IMAPLDSR+ + IQ LGVP* CQ IAS FH
Sbjct: 549 KLFPESCQVIANAATAPE*LKLMVIG*IMAPLDSRRNLRIQVLGVP*RCQ*FNRIASVFH 370
Query: 636 VWSLSFTKSGA*LAI*TISLFFSRPVRKAASANEARRLPLPASLLQTA 779
V S+ KSGA*L I*TISLF S PVRK+ASA+E RRLPLPAS+L TA
Sbjct: 369 V*SMWSPKSGA*LPI*TISLFLSSPVRKSASASEPRRLPLPASVLHTA 226
Score = 102 bits (217), Expect(2) = 1e-023
Identities = 49/107 (45%), Positives = 67/107 (62%)
Frame = +2 / -1
Query: 452 QEAILCILPRDRRRGQRTRVPGTDINRMDHGAA*LAENRLHPVARSSIVLPGVEDDSVRV 631
Q+ I I+P D + TRV TD N M+HG AE HP RSS+ LP V S+ +
Sbjct: 553 QQVIPGIMPGDSKCCYSTRVAETDGNWMNHGTTRFAEKSPHPGTRSSVALPVV*SYSICI 374
Query: 632 PRLVIVVHEEWCVTCHLNNITVLLQTSEESSFSQRSKKTASTRVTSP 772
PRL+ VV +E C+T H+N+I VL+Q S+E S Q +KK +ST ++SP
Sbjct: 373 PRLIDVVSKERCMTSHMNDIAVLIQPSKEVSLCQ*TKKASSTCISSP 233
Score = 78.5 bits (165), Expect(2) = 2e-022
Identities = 47/108 (43%), Positives = 60/108 (55%)
Frame = -2 / +1
Query: 773 LEK*RG*RQSSCFVG*SCFPHWSGEEQ*YCSDGKLRTTLRERQ*PNVEPGRYRLQLLAAL 594
+E * *R+ S F G P+W+G EQ Y S GK T L NVE Y ++LLA L
Sbjct: 232 MEN*CR*RKPSWFTGRG*LPYWAG*EQRYRSYGKSCTALWRPHRSNVEYRCYTIKLLATL 411
Query: 593 WNS*LLDADDFPRVKRRHDPSG*YQFPVLEFAGRVCDHVAGCRE*LPE 450
NS* LDA+ PR+ HD S +QF +L +C H+A RE*L +
Sbjct: 412 RNS*YLDAEISPRI*WCHDSSNYHQFQLLWCCSSICYHLA*FRE*LAD 555
Score = 46.9 bits (96), Expect(2) = 2e-022
Identities = 22/34 (64%), Positives = 26/34 (76%)
Frame = -3 / +1
Query: 445 KVVNFGSDPVSLTVSTSGLGASVNALGSTATVLT 344
K+ NF S VSLTVS GL A+++ALGS ATVLT
Sbjct: 559 KIGNFESGTVSLTVSACGLQATISALGSHATVLT 660
Score = 46.4 bits (95), Expect(2) = 3e-039
Identities = 22/34 (64%), Positives = 24/34 (70%)
Frame = +3 / -3
Query: 345 VRTVAVDPSALTLAPSPLVETVRLTGSDPKFTTF 446
VRTVA DPSAL +A SP +TVRLT D KF F
Sbjct: 659 VRTVACDPSALMVAWSPHADTVRLTVPDSKFPIF 558
Score = 27.2 bits (53), Expect(2) = 1e-023
Identities = 16/36 (44%), Positives = 20/36 (55%)
Frame = +2 / -2
Query: 338 ARREDGGG*SQRVDAGPEPARGDREANGVRPEVHDL 445
A RED * +R EPAR +A+G R EV +L
Sbjct: 666 AVREDSSV*PKRAYGSLEPARRYCKAHGARLEVPNL 559
Score = 26.3 bits (51), Expect(2) = 1e-036
Identities = 12/26 (46%), Positives = 14/26 (53%)
Frame = -3 / +3
Query: 328 DENSFSNPNKVAPVKSQLSNAAEQMQ 251
DEN + KV P SQL N E M+
Sbjct: 675 DENFLRSQPKVGPWTSQLHNFGEAME 752
>gb|CA024671.1|CA024671 HZ49P14r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ49P14
5-PRIME, mRNA sequence
Length = 597
Score = 152 bits (327), Expect = 2e-036
Identities = 73/95 (76%), Positives = 77/95 (81%)
Frame = +3 / -2
Query: 480 VIADAASELEYRELILTGWIMAPLDSRKIVCIQ*LGVP*CCQELKTIASGFHVWSLSFTK 659
VIADAA+E E EL L GWI APLDSRK VCIQ*LGVP CCQELKTIASG H S SFTK
Sbjct: 596 VIADAANEPE*LELSLIGWITAPLDSRKNVCIQ*LGVPYCCQELKTIASGVHWRSFSFTK 417
Query: 660 SGA*LAI*TISLFFSRPVRKAASANEARRLPLPAS 764
SGA*LA+ TISLF S P+R AASANEARR+PL S
Sbjct: 416 SGA*LAMWTISLFTSNPMRNAASANEARRVPLLVS 312
Score = 140 bits (301), Expect = 7e-033
Identities = 57/95 (60%), Positives = 63/95 (66%)
Frame = -3 / +1
Query: 763 DAGRGXXXXXXXXXXXLTGLEKNSDIVQMASYAPLFVNDNDQTWNPDAIVFNSWQHYGTP 584
D +G L GLE NSDIV MASYAPLFVN+ND+ W PDAIVFNSWQ YGTP
Sbjct: 313 DTSKGTLLASLAEAAFLIGLEVNSDIVHMASYAPLFVNENDRQWTPDAIVFNSWQQYGTP 492
Query: 583 SYWMQTIFRESSGAMIHPVNIXXXXXXXXXXXAIT 479
SYWMQT FRESSGA+IHP+ + AIT
Sbjct: 493 SYWMQTFFRESSGAVIHPMRLNSSYSGSLAASAIT 597
>gb|AL500477.1|AL500477 AL500477 Hordeum vulgare Barke etiolated leaves Hordeum vulgare
subsp. vulgare cDNA clone HK06M19r 3', mRNA sequence
Length = 514
Score = 144 bits (310), Expect(2) = 5e-035
Identities = 65/86 (75%), Positives = 72/86 (83%)
Frame = -3 / -3
Query: 433 FGSDPVSLTVSTSGLGASVNALGSTATVLTSGNVMDENSFSNPNKVAPVKSQLSNAAEQM 254
FGSD VSLT+ SGL AS+NALGS ATVLTS NV DENSFSNP KV PV SQL NAAEQM
Sbjct: 479 FGSDTVSLTIXVSGLQASINALGSNATVLTSSNVKDENSFSNPTKVVPVTSQLHNAAEQM 300
Query: 253 QVTLAPHSFTAFDLALAEPKLVAEI* 176
QVTLA HSF++ DLALA+ +LVAE+*
Sbjct: 299 QVTLAAHSFSSXDLALAQSELVAEM* 222
Score = 122 bits (260), Expect(2) = 6e-028
Identities = 62/86 (72%), Positives = 63/86 (73%)
Frame = +3 / +1
Query: 177 HISATSLGSASARSKAVKE*GASVTCICSAALLSWLFTGATLFGLLKEFSSMTLPDVRTV 356
HISATS ASARS KE ASVTCICSAAL + L TG TL GLLKEFSS TL DVRTV
Sbjct: 223 HISATSSD*ASARSNEEKEWAASVTCICSAALCN*LVTGTTLVGLLKEFSSFTLLDVRTV 402
Query: 357 AVDPSALTLAPSPLVETVRLTGSDPK 434
A DPSAL LA SP VRLT SDPK
Sbjct: 403 AFDPSALMLAWSPDTXIVRLTVSDPK 480
Score = 23.1 bits (44), Expect(2) = 5e-035
Identities = 8/10 (80%), Positives = 10/10 (100%)
Frame = -3 / -2
Query: 460 SFLRVKVVNF 431
+FLRVK+VNF
Sbjct: 507 TFLRVKIVNF 478
Score = 22.1 bits (42), Expect(2) = 6e-028
Identities = 7/11 (63%), Positives = 11/11 (100%)
Frame = +2 / +1
Query: 428 PEVHDLHSQEA 460
P+VH+L+SQE+
Sbjct: 475 PKVHNLYSQES 507
>gb|CA028812.1|CA028812 HZ63F05r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ63F05
5-PRIME, mRNA sequence
Length = 415
Score = 147 bits (315), Expect = 8e-035
Identities = 70/92 (76%), Positives = 74/92 (80%)
Frame = +3 / -3
Query: 489 DAASELEYRELILTGWIMAPLDSRKIVCIQ*LGVP*CCQELKTIASGFHVWSLSFTKSGA 668
DAA+E E EL L GWI APLDSRK VCIQ*LGVP CCQELKTIASG H S SFTKSGA
Sbjct: 413 DAANEPE*LELSLIGWITAPLDSRKNVCIQ*LGVPYCCQELKTIASGVHWRSFSFTKSGA 234
Query: 669 *LAI*TISLFFSRPVRKAASANEARRLPLPAS 764
*LA+ TISLF S P+R AASANEARR+PL S
Sbjct: 233 *LAMWTISLFTSNPMRNAASANEARRVPLLVS 138
Score = 138 bits (296), Expect = 3e-032
Identities = 54/81 (66%), Positives = 60/81 (74%)
Frame = -3 / +1
Query: 763 DAGRGXXXXXXXXXXXLTGLEKNSDIVQMASYAPLFVNDNDQTWNPDAIVFNSWQHYGTP 584
D +G L GLE NSDIV MASYAPLFVN+ND+ W PDAIVFNSWQ YGTP
Sbjct: 139 DTSKGTLLASLAEAAFLIGLEVNSDIVHMASYAPLFVNENDRQWTPDAIVFNSWQQYGTP 318
Query: 583 SYWMQTIFRESSGAMIHPVNI 521
SYWMQT FRESSGA+IHP+ +
Sbjct: 319 SYWMQTFFRESSGAVIHPMRL 381
>gb|CA025468.1|CA025468 HZ52E03r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ52E03
5-PRIME, mRNA sequence
Length = 462
Score = 145 bits (312), Expect = 2e-034
Identities = 62/113 (54%), Positives = 77/113 (68%)
Frame = -3 / +1
Query: 544 AMIHPVNIXXXXXXXXXXXAITWQDAENSFLRVKVVNFGSDPVSLTVSTSGLGASVNALG 365
A+IHP+ + AITW D E+ FLR+K+VNFGS+ V+LT+S GL A VN
Sbjct: 10 AVIHPMRLNSSYSGSLAASAITWGDNEDIFLRIKIVNFGSNAVNLTLSAIGLQAGVNTSR 189
Query: 364 STATVLTSGNVMDENSFSNPNKVAPVKSQLSNAAEQMQVTLAPHSFTAFDLAL 206
S TVLTS NV+DEN+F +P V P +S L NAAE+MQ L PHSFT+FDLAL
Sbjct: 190 SAVTVLTSDNVLDENTFDDPRNVVPERSDLPNAAEEMQAMLVPHSFTSFDLAL 348
Score = 124 bits (265), Expect = 7e-028
Identities = 64/112 (57%), Positives = 71/112 (63%)
Frame = +3 / -2
Query: 210 ARSKAVKE*GASVTCICSAALLSWLFTGATLFGLLKEFSSMTLPDVRTVAVDPSALTLAP 389
ARS VKE*G S+ CI SAAL L +G TL G FSS TL DVRTV + LT A
Sbjct: 344 ARSNEVKE*GTSMACISSAALGRSLLSGTTLRGSSNVFSSNTLSDVRTVTAERDVLTPAC 165
Query: 390 SPLVETVRLTGSDPKFTTFTLRKLFSASCHVIADAASELEYRELILTGWIMA 545
SP+ + VR T DPKFT F LRK+ S S VIADAA+E E EL L GWI A
Sbjct: 164 SPIADKVRFTAFDPKFTIFILRKISSLSPQVIADAANEPE*LELSLIGWITA 9
>gb|BI947203.1|BI947203 HVSMEl0004D16f Hordeum vulgare spike EST library HVcDNA0012
(Fusarium infected) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEl0004D16f, mRNA sequence
Length = 845
Score = 126 bits (269), Expect(2) = 2e-033
Identities = 58/119 (48%), Positives = 74/119 (62%)
Frame = -3 / +1
Query: 562 FRESSGAMIHPVNIXXXXXXXXXXXAITWQDAENSFLRVKVVNFGSDPVSLTVSTSGLGA 383
F +SSGA IH + + AIT D E+ F+R+ +VNFG + V+LT+S GL A
Sbjct: 127 FPDSSGAEIHAMRLTSCYSGSLPESAIT*GDNEDIFMRINIVNFGPNAVNLTLSAIGLQA 306
Query: 382 SVNALGSTATVLTSGNVMDENSFSNPNKVAPVKSQLSNAAEQMQVTLAPHSFTAFDLAL 206
VN S TV+T NV+DEN+F +P V P S L NA E+MQ L PHSFT+FDLAL
Sbjct: 307 GVNTSRSAVTVVTFDNVLDENTFDDPPNVVPE*SDLPNAGEEMQAMLVPHSFTSFDLAL 483
Score = 107 bits (229), Expect = 6e-023
Identities = 56/118 (47%), Positives = 69/118 (58%)
Frame = +3 / -1
Query: 210 ARSKAVKE*GASVTCICSAALLSWLFTGATLFGLLKEFSSMTLPDVRTVAVDPSALTLAP 389
ARS VKE*G S+ CI S AL L +G TL G FSS TL +V TV + T A
Sbjct: 479 ARSNEVKE*GTSMACISSPALGRSLHSGTTLGGSSNVFSSNTLSNVTTVTAERDVFTPAC 300
Query: 390 SPLVETVRLTGSDPKFTTFTLRKLFSASCHVIADAASELEYRELILTGWIMAPLDSRK 563
SP+ + VR T PK T F L K+ S S V+AD+ +E E +E+ L WI APL+S K
Sbjct: 299 SPIADKVRFTAFGPKLTMFILMKISSLSPQVMADSGNEPE*QEVSLIAWISAPLESGK 126
Score = 36.3 bits (73), Expect(2) = 2e-033
Identities = 15/26 (57%), Positives = 18/26 (69%)
Frame = -3 / +1
Query: 685 VQMASYAPLFVNDNDQTWNPDAIVFN 608
V MASYAPLF ++N W P A+V N
Sbjct: 1 VHMASYAPLFDDENY*YWTPYALVLN 78
>gb|BM097298.1|BM097298 EBro01_SQ004_M09_R root, 3 week, hydroponic grown, no treatment, cv
Optic, EBro01 Hordeum vulgare subsp. vulgare cDNA clone
EBro01_SQ004_M09 5', mRNA sequence
Length = 429
Score = 140 bits (300), Expect = 1e-032
Identities = 63/81 (77%), Positives = 70/81 (86%)
Frame = -3 / +2
Query: 418 VSLTVSTSGLGASVNALGSTATVLTSGNVMDENSFSNPNKVAPVKSQLSNAAEQMQVTLA 239
VSLT+S SGL AS+NALGS ATVLTS NV DENSFSNP KV PV SQL NAAEQMQVTLA
Sbjct: 2 VSLTISVSGLQASINALGSNATVLTSSNVKDENSFSNPTKVVPVTSQLHNAAEQMQVTLA 181
Query: 238 PHSFTAFDLALAEPKLVAEI* 176
HSF++FDLALA+ +LVAE+*
Sbjct: 182 AHSFSSFDLALAQSELVAEM* 244
Score = 116 bits (247), Expect = 2e-025
Identities = 59/81 (72%), Positives = 60/81 (74%)
Frame = +3 / -1
Query: 177 HISATSLGSASARSKAVKE*GASVTCICSAALLSWLFTGATLFGLLKEFSSMTLPDVRTV 356
HISATS ASARS KE ASVTCICSAAL + L TG TL GLLKEFSS TL DVRTV
Sbjct: 243 HISATSSD*ASARSNEEKEWAASVTCICSAALCN*LVTGTTLVGLLKEFSSFTLLDVRTV 64
Query: 357 AVDPSALTLAPSPLVETVRLT 419
A DPSAL LA SP E VRLT
Sbjct: 63 AFDPSALMLAWSPDTEIVRLT 1
>gb|AJ462649.1|AJ462649 AJ462649 S00002 Hordeum vulgare subsp. vulgare cDNA clone
S0000200082D06F1, mRNA sequence
Length = 240
Score = 131 bits (280), Expect = 6e-030
Identities = 59/76 (77%), Positives = 65/76 (85%)
Frame = -3 / +2
Query: 403 STSGLGASVNALGSTATVLTSGNVMDENSFSNPNKVAPVKSQLSNAAEQMQVTLAPHSFT 224
S SGL AS+NALGS ATVLTS NV DENSFSNP KV PV SQL NAAEQMQVTLA HSF+
Sbjct: 2 SVSGLQASINALGSNATVLTSSNVKDENSFSNPTKVVPVTSQLHNAAEQMQVTLAAHSFS 181
Query: 223 AFDLALAEPKLVAEI* 176
+FDLALA+ +LVAE+*
Sbjct: 182 SFDLALAQSELVAEM* 229
Score = 108 bits (230), Expect = 4e-023
Identities = 55/76 (72%), Positives = 56/76 (73%)
Frame = +3 / -1
Query: 177 HISATSLGSASARSKAVKE*GASVTCICSAALLSWLFTGATLFGLLKEFSSMTLPDVRTV 356
HISATS ASARS KE ASVTCICSAAL + L TG TL GLLKEFSS TL DVRTV
Sbjct: 228 HISATSSD*ASARSNEEKEWAASVTCICSAALCN*LVTGTTLVGLLKEFSSFTLLDVRTV 49
Query: 357 AVDPSALTLAPSPLVE 404
A DPSAL LA SP E
Sbjct: 48 AFDPSALMLAWSPDTE 1
>gb|AL500044.1|AL500044 AL500044 Hordeum vulgare Barke etiolated leaves Hordeum vulgare
subsp. vulgare cDNA clone HK04K11r 3', mRNA sequence
Length = 499
Score = 110 bits (235), Expect(2) = 3e-028
Identities = 49/68 (72%), Positives = 54/68 (79%)
Frame = -3 / -1
Query: 445 KVVNFGSDPVSLTVSTSGLGASVNALGSTATVLTSGNVMDENSFSNPNKVAPVKSQLSNA 266
++ GSD +S T+S SGL AS+NALGS ATVLTS NV DENSFSNP KV PV SQL NA
Sbjct: 484 RLXTSGSDTLSXTISVSGLQASINALGSNATVLTSSNVKDENSFSNPTKVVPVTSQLHNA 305
Query: 265 AEQMQVTL 242
AEQMQVTL
Sbjct: 304 AEQMQVTL 281
Score = 94.5 bits (200), Expect(2) = 1e-022
Identities = 46/64 (71%), Positives = 48/64 (75%)
Frame = +3 / +3
Query: 243 SVTCICSAALLSWLFTGATLFGLLKEFSSMTLPDVRTVAVDPSALTLAPSPLVETVRLTG 422
SVTCICSAAL + L TG TL GLLKEFSS TL DVRTVA DPSAL LA SP E V L
Sbjct: 282 SVTCICSAALCN*LVTGTTLVGLLKEFSSFTLLDVRTVAFDPSALMLAWSPDTEIVXLKV 461
Query: 423 SDPK 434
SDP+
Sbjct: 462 SDPE 473
Score = 34.5 bits (69), Expect(2) = 3e-028
Identities = 14/20 (70%), Positives = 19/20 (95%)
Frame = -3 / -2
Query: 235 HSFTAFDLALAEPKLVAEI* 176
HSF++FDLALA+ +LVAE+*
Sbjct: 273 HSFSSFDLALAQSELVAEM* 214
Score = 31.8 bits (63), Expect(2) = 1e-022
Identities = 13/20 (65%), Positives = 17/20 (85%)
Frame = +2 / +1
Query: 176 SYLRHKLGLSQRQIEGGEGV 235
S+L KLGLS+R++E GEGV
Sbjct: 214 SHLCDKLGLSKRKVERGEGV 273
>gb|BI951143.1|BI951143 HVSMEl0024K06f Hordeum vulgare spike EST library HVcDNA0012
(Fusarium infected) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEl0024K06f, mRNA sequence
Length = 866
Score = 124 bits (266), Expect = 5e-028
Identities = 66/129 (51%), Positives = 77/129 (59%)
Frame = -3 / +2
Query: 562 FRESSGAMIHPVNIXXXXXXXXXXXAITWQDAENSFLRVKVVNFGSDPVSLTVSTSGLGA 383
FR G + I ITWQD+ ++FLRVK+VNFGS SLT+S G
Sbjct: 11 FRGGGGGXKKTITIXSXYSXSLXXSXITWQDSGDNFLRVKIVNFGSGTGSLTISGGGGXX 190
Query: 382 SVNALGSTATVLTSGNVMDENSFSNPNKVAPVKSQLSNAAEQMQVTLAPHSFTAFDLALA 203
+N LG T T N ENSFSNP K P S L N AEQMQ TL HSF+ DLALA
Sbjct: 191 XINXLG*NXTKKTYNNGKGENSFSNPTKGGPGTSXLHNGAEQMQGTLXGHSFSXVDLALA 370
Query: 202 EPKLVAEI* 176
+ +L AE+*
Sbjct: 371 QSELXAEM* 397
Score = 107 bits (229), Expect(2) = 2e-024
Identities = 61/129 (47%), Positives = 65/129 (50%)
Frame = +3 / -3
Query: 177 HISATSLGSASARSKAVKE*GASVTCICSAALLSWLFTGATLFGLLKEFSSMTLPDVRTV 356
HISA S ASARS KE V CICSA L L G L GLLKEFS L V V
Sbjct: 396 HISAXSSD*ASARSTXEKEWPXRVPCICSAPLCXSLVPGPPLVGLLKEFSPFPLLYVFLV 217
Query: 357 AVDPSALTLAPSPLVETVRLTGSDPKFTTFTLRKLFSASCHVIADAASELEYRELILTGW 536
P L P E VRL DPKFT FTLRKL SC VI D + E E I+ +
Sbjct: 216 XFHPXXLMXXSPPPPEIVRLPVPDPKFTIFTLRKLSPESCQVIXDXXRDXE*XEXIVIVF 37
Query: 537 IMAPLDSRK 563
+ P RK
Sbjct: 36 XIPPPPPRK 10
Score = 26.7 bits (52), Expect(2) = 2e-024
Identities = 9/15 (60%), Positives = 10/15 (66%)
Frame = +3 / -2
Query: 3 PPPRVFFFFFLERKP 47
PPPR+FF FF P
Sbjct: 613 PPPRLFFSFFHRNPP 569
>gb|AV912856.1|AV912856 AV912856 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags10j19 5', mRNA sequence
Length = 585
Score = 122 bits (261), Expect = 2e-027
Identities = 56/63 (88%), Positives = 58/63 (92%)
Frame = +3 / -1
Query: 591 P*CCQELKTIASGFHVWSLSFTKSGA*LAI*TISLFFSRPVRKAASANEARRLPLPASLL 770
P CCQELKTIASGFHV SLSFTKSGA*LAI*TISLFFS PVRKAASA+E RRLPLPAS+L
Sbjct: 585 PYCCQELKTIASGFHV*SLSFTKSGA*LAI*TISLFFSSPVRKAASASEPRRLPLPASVL 406
Query: 771 QTA 779
TA
Sbjct: 405 HTA 397
Score = 119 bits (254), Expect = 2e-026
Identities = 48/62 (77%), Positives = 49/62 (79%)
Frame = -3 / +2
Query: 778 AVWRSDAGRGXXXXXXXXXXXLTGLEKNSDIVQMASYAPLFVNDNDQTWNPDAIVFNSWQ 599
AVWR+DAGRG LTGLEKNSDIV MASYAPLFVNDNDQTWNPDAIVFNSWQ
Sbjct: 398 AVWRTDAGRGSLLGSLAEAAFLTGLEKNSDIVHMASYAPLFVNDNDQTWNPDAIVFNSWQ 577
Query: 598 HY 593
Y
Sbjct: 578 QY 583
>gb|AV836811.1|AV836811 AV836811 K. Sato unpublished cDNA library: Hordeum vulgare subsp.
vulgare seedling leaves second leaf stage Hordeum
vulgare subsp. vulgare cDNA clone basd3o13, mRNA
sequence
Length = 556
Score = 107 bits (229), Expect(2) = 3e-026
Identities = 42/86 (48%), Positives = 63/86 (73%)
Frame = -3 / -1
Query: 463 NSFLRVKVVNFGSDPVSLTVSTSGLGASVNALGSTATVLTSGNVMDENSFSNPNKVAPVK 284
N++L++KV+NFG+ V L++S +GL + GS TVLTSG++ DENSF P+KV PV+
Sbjct: 451 NAYLKIKVLNFGNKAVDLSISITGLENGIQTFGSIKTVLTSGSLWDENSFQQPDKVVPVE 272
Query: 283 SQLSNAAEQMQVTLAPHSFTAFDLAL 206
S ++NA E+M + L P++ T+FDL L
Sbjct: 271 SPITNAREEMSLVLDPYALTSFDLLL 194
Score = 30.4 bits (60), Expect(2) = 3e-026
Identities = 13/40 (32%), Positives = 20/40 (50%)
Frame = -3 / -1
Query: 559 RESSGAMIHPVNIXXXXXXXXXXXAITWQDAENSFLRVKV 440
R SGA +HP I AITWQ++++ +K+
Sbjct: 553 RTQSGAALHPSTIQVSNYNQLVASAITWQNSKDGNAYLKI 434
>gb|BE437755.1|BE437755 SFR007.B08F990617 ITEC SFR Barley Leaf Epidermis Library Hordeum
vulgare subsp. vulgare cDNA clone SF, mRNA sequence
Length = 522
Score = 107 bits (229), Expect = 6e-023
Identities = 42/86 (48%), Positives = 63/86 (73%)
Frame = -3 / +1
Query: 463 NSFLRVKVVNFGSDPVSLTVSTSGLGASVNALGSTATVLTSGNVMDENSFSNPNKVAPVK 284
N++L++KV+NFG+ V L++S +GL + GS TVLTSG++ DENSF P+KV PV+
Sbjct: 58 NAYLKIKVLNFGNKAVDLSISITGLENGIQTFGSIKTVLTSGSLWDENSFQQPDKVVPVE 237
Query: 283 SQLSNAAEQMQVTLAPHSFTAFDLAL 206
S ++NA E+M + L P++ T+FDL L
Sbjct: 238 SPITNAREEMSLVLDPYALTSFDLLL 315
Database: Hordeum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:16 PM
Number of letters in database: 175,134,539
Number of sequences in database: 312,970
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 389,552,752
Number of Sequences: 312970
Number of extensions: 6779487
Number of successful extensions: 116112
Number of sequences better than 1.0e-020: 44
length of database: 58,378,179
effective HSP length: 52
effective length of database: 42,103,739
effective search space used: 8715473973
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)