TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2161272.2.22
(333 letters)
Database: Hordeum_nucl_with_EST.fasta
312,970 sequences; 175,134,539 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BQ472310.1|BQ472310 HB09P08T BC Hordeum vulgare subsp. v... 90 6e-018
gb|BU968577.1|BU968577 HB07P08r BC Hordeum vulgare subsp. v... 90 6e-018
gb|BQ661086.1|BQ661086 HM01N16w HM Hordeum vulgare subsp. v... 71 4e-014
gb|BQ764256.1|BQ764256 EBan01_SQ005_G11_R anther, yellow st... 71 4e-014
gb|BM100134.2|BM100134 EBma01_SQ001_E17_R maternal, 4 DPA, ... 70 2e-013
gb|AV916876.1|AV916876 AV916876 K. Sato unpublished cDNA li... 70 3e-013
gb|AV922174.1|AV922174 AV922174 K. Sato unpublished cDNA li... 70 3e-013
gb|BJ466112.1|BJ466112 BJ466112 K. Sato unpublished cDNA li... 70 3e-013
gb|CA028544.1|CA028544 HZ62G02r HZ Hordeum vulgare subsp. v... 70 5e-013
gb|CB858437.1|CB858437 HI07A02w HI Hordeum vulgare subsp. v... 70 6e-013
gb|CV054913.1|CV054913 BNEL114f9 Barley EST endosperm libra... 70 6e-013
gb|AL505468.1|AL505468 AL505468 Hordeum vulgare Barke roots... 73 8e-013
gb|CA023147.1|CA023147 HZ45F22r HZ Hordeum vulgare subsp. v... 70 4e-012
gb|BE420576.1|BE420576 HWM000.D01 ITEC HWM Barley Leaf Libr... 70 5e-012
gb|BE420971.1|BE420971 HWM004.D12 ITEC HWM Barley Leaf Libr... 70 5e-012
gb|AL502045.1|AL502045 AL502045 Hordeum vulgare Barke roots... 70 5e-012
gb|BI947342.1|BI947342 HVSMEl0005D04f Hordeum vulgare spike... 70 5e-012
gb|AV913933.1|AV913933 AV913933 K. Sato unpublished cDNA li... 70 5e-012
gb|AV917579.1|AV917579 AV917579 K. Sato unpublished cDNA li... 70 5e-012
gb|AV917900.1|AV917900 AV917900 K. Sato unpublished cDNA li... 70 5e-012
gb|AV918128.1|AV918128 AV918128 K. Sato unpublished cDNA li... 70 5e-012
gb|AV918243.1|AV918243 AV918243 K. Sato unpublished cDNA li... 70 5e-012
gb|AV918260.1|AV918260 AV918260 K. Sato unpublished cDNA li... 70 5e-012
gb|AV918262.1|AV918262 AV918262 K. Sato unpublished cDNA li... 70 5e-012
gb|AV918859.1|AV918859 AV918859 K. Sato unpublished cDNA li... 70 5e-012
gb|AV919042.1|AV919042 AV919042 K. Sato unpublished cDNA li... 70 5e-012
gb|AV919161.1|AV919161 AV919161 K. Sato unpublished cDNA li... 70 5e-012
gb|AV920604.1|AV920604 AV920604 K. Sato unpublished cDNA li... 70 5e-012
gb|AV921410.1|AV921410 AV921410 K. Sato unpublished cDNA li... 70 5e-012
gb|AV921547.1|AV921547 AV921547 K. Sato unpublished cDNA li... 70 5e-012
gb|AV921892.1|AV921892 AV921892 K. Sato unpublished cDNA li... 70 5e-012
gb|BM444609.1|BM444609 EBem09_SQ005_O07_R embryo, 1 Day ger... 70 5e-012
gb|BM444610.1|BM444610 EBem09_SQ005_O09_R embryo, 1 Day ger... 70 5e-012
gb|AJ433290.1|AJ433290 AJ433290 S00002 Hordeum vulgare subs... 70 5e-012
gb|BJ462494.1|BJ462494 BJ462494 K. Sato unpublished cDNA li... 70 5e-012
gb|BJ465763.1|BJ465763 BJ465763 K. Sato unpublished cDNA li... 70 5e-012
gb|BJ466393.1|BJ466393 BJ466393 K. Sato unpublished cDNA li... 70 5e-012
gb|BJ467710.1|BJ467710 BJ467710 K. Sato unpublished cDNA li... 70 5e-012
gb|BJ468274.1|BJ468274 BJ468274 K. Sato unpublished cDNA li... 70 5e-012
gb|BJ468501.1|BJ468501 BJ468501 K. Sato unpublished cDNA li... 70 5e-012
gb|BQ661453.1|BQ661453 HM03J01u HM Hordeum vulgare subsp. v... 70 5e-012
gb|BM375888.2|BM375888 EBem06_SQ004_L04_R embryo, 21 DPA, n... 70 5e-012
gb|BQ759428.1|BQ759428 EBpi01_SQ004_B14_R pistil, 1 DPA, no... 70 5e-012
gb|BQ764858.1|BQ764858 EBca01_SQ005_H06_R carpel, pre-anthe... 70 5e-012
gb|BU972640.1|BU972640 HB22E11r BC Hordeum vulgare subsp. v... 70 5e-012
gb|CA028155.1|CA028155 HZ61C14r HZ Hordeum vulgare subsp. v... 70 5e-012
gb|CB880505.1|CB880505 HM06L21w HM Hordeum vulgare subsp. v... 70 5e-012
gb|CB880520.1|CB880520 HM06M21w HM Hordeum vulgare subsp. v... 70 5e-012
gb|BE422156.1|BE422156 HWM020cG.09r ITEC HWM Barley Leaf Li... 69 7e-012
gb|BQ469152.1|BQ469152 HM03J01r HM Hordeum vulgare subsp. v... 69 7e-012
gb|AV921614.1|AV921614 AV921614 K. Sato unpublished cDNA li... 68 1e-011
gb|AV917200.1|AV917200 AV917200 K. Sato unpublished cDNA li... 68 2e-011
gb|AL509490.1|AL509490 AL509490 Hordeum vulgare Barke devel... 68 3e-011
gb|BE601818.2|BE601818 HVSMEh0099K11f Hordeum vulgare 5-45 ... 68 3e-011
gb|BE601859.2|BE601859 HVSMEh0099M17f Hordeum vulgare 5-45 ... 68 3e-011
gb|BI947748.1|BI947748 HVSMEl0006L16f Hordeum vulgare spike... 68 3e-011
gb|BI949909.1|BI949909 HVSMEl0016O06f Hordeum vulgare spike... 68 3e-011
gb|BI951308.1|BI951308 HVSMEl0025H09f Hordeum vulgare spike... 68 3e-011
gb|BE196548.3|BE196548 HVSMEh0092J16f Hordeum vulgare 5-45 ... 68 3e-011
gb|BE601804.3|BE601804 HVSMEh0099J17f Hordeum vulgare 5-45 ... 68 3e-011
gb|BG418369.2|BG418369 HVSMEk0022H13f Hordeum vulgare testa... 68 3e-011
gb|BQ465020.1|BQ465020 HU02G21r HU Hordeum vulgare subsp. v... 68 3e-011
gb|BQ466282.1|BQ466282 HT02B16r HT Hordeum vulgare subsp. v... 68 3e-011
gb|BQ657405.1|BQ657405 HA08I10u HA Hordeum vulgare subsp. v... 68 3e-011
gb|BQ659818.1|BQ659818 HF01M24w HF Hordeum vulgare subsp. v... 68 3e-011
gb|BQ663387.1|BQ663387 HU02G21u HU Hordeum vulgare subsp. v... 68 3e-011
gb|BM441741.2|BM441741 EBed07_SQ001_G19_R endosperm, 28 DPA... 68 3e-011
gb|BQ755347.1|BQ755347 EBed07_SQ002_J07_R endosperm, 28 DPA... 68 3e-011
gb|BU976211.1|BU976211 HA03F10u HA Hordeum vulgare subsp. v... 68 3e-011
gb|BU984559.1|BU984559 HF04E16r HF Hordeum vulgare subsp. v... 68 3e-011
gb|BU986792.1|BU986792 HF12O16r HF Hordeum vulgare subsp. v... 68 3e-011
gb|CA010249.1|CA010249 HT11B14u HT Hordeum vulgare subsp. v... 68 3e-011
gb|CK124362.1|CK124362 BES1824108i03 BES1824 Hordeum vulgar... 68 3e-011
gb|CV053661.1|CV053661 BNEL101g2 Barley EST endosperm libra... 67 3e-011
gb|AV920097.1|AV920097 AV920097 K. Sato unpublished cDNA li... 67 5e-011
gb|BM100114.2|BM100114 EBma01_SQ001_D19_R maternal, 4 DPA, ... 67 5e-011
gb|BG344496.1|BG344496 HVSMEg0009H02f Hordeum vulgare pre-a... 66 6e-011
gb|BE193330.2|BE193330 HVSMEh0080J19f Hordeum vulgare 5-45 ... 66 6e-011
gb|BJ467618.1|BJ467618 BJ467618 K. Sato unpublished cDNA li... 65 1e-010
gb|BJ473760.1|BJ473760 BJ473760 K. Sato unpublished cDNA li... 64 2e-010
gb|BJ474408.1|BJ474408 BJ474408 K. Sato unpublished cDNA li... 64 2e-010
gb|BE601810.2|BE601810 HVSMEh0099K03f Hordeum vulgare 5-45 ... 64 2e-010
gb|AV936469.1|AV936469 AV936469 K. Sato unpublished cDNA li... 64 2e-010
gb|BJ463709.1|BJ463709 BJ463709 K. Sato unpublished cDNA li... 64 2e-010
gb|BJ467881.1|BJ467881 BJ467881 K. Sato unpublished cDNA li... 64 2e-010
gb|BJ475687.1|BJ475687 BJ475687 K. Sato unpublished cDNA li... 64 2e-010
gb|BQ468777.1|BQ468777 HM02F02r HM Hordeum vulgare subsp. v... 64 2e-010
gb|BQ134683.1|BQ134683 LP30159 Lemma/palea-enriched cDNA li... 64 2e-010
gb|BU995809.1|BU995809 HM11G24r HM Hordeum vulgare subsp. v... 64 2e-010
gb|CA018105.1|CA018105 HV07H15r HV Hordeum vulgare subsp. v... 64 2e-010
gb|CB881964.1|CB881964 HM11G24w HM Hordeum vulgare subsp. v... 64 2e-010
gb|BE454083.2|BE454083 HVSMEh0080E16f Hordeum vulgare 5-45 ... 63 4e-010
gb|BM441944.2|BM441944 EBed07_SQ001_P23_R endosperm, 28 DPA... 63 6e-010
gb|BU989213.1|BU989213 HF21B21r HF Hordeum vulgare subsp. v... 61 2e-009
gb|AL511635.1|AL511635 AL511635 Hordeum vulgare Barke devel... 60 4e-009
gb|BF629833.2|BF629833 HVSMEb0007A10f Hordeum vulgare seedl... 58 2e-008
gb|BG415057.1|BG415057 HVSMEk0004O20f Hordeum vulgare testa... 58 2e-008
gb|AV920504.1|AV920504 AV920504 K. Sato unpublished cDNA li... 56 7e-008
gb|CA004937.1|CA004937 HU12M16u HU Hordeum vulgare subsp. v... 48 1e-007
gb|BQ468553.1|BQ468553 HM01J08T HM Hordeum vulgare subsp. v... 48 1e-007
gb|CB880642.1|CB880642 HM07D21w HM Hordeum vulgare subsp. v... 48 1e-007
gb|CA005762.1|CA005762 HU08L11u HU Hordeum vulgare subsp. v... 48 1e-007
gb|CA005269.1|CA005269 HU11E05u HU Hordeum vulgare subsp. v... 48 1e-007
gb|BF260659.3|BF260659 HVSMEf0022J15f Hordeum vulgare seedl... 48 1e-007
gb|BQ472448.1|BQ472448 HB09J14T BC Hordeum vulgare subsp. v... 55 1e-007
gb|BQ472509.1|BQ472509 HB09F20T BC Hordeum vulgare subsp. v... 55 1e-007
gb|BU968389.1|BU968389 HB07F20r BC Hordeum vulgare subsp. v... 55 1e-007
gb|BU968461.1|BU968461 HB07J14r BC Hordeum vulgare subsp. v... 55 1e-007
gb|BU977487.1|BU977487 HA11I05r HA Hordeum vulgare subsp. v... 55 1e-007
gb|CD662781.1|CD662781 UCRHV18_03ad10_b1 Drought-stressed D... 55 1e-007
gb|CB882027.1|CB882027 HM11K09w HM Hordeum vulgare subsp. v... 48 1e-007
gb|BU993981.1|BU993981 HM05D21r HM Hordeum vulgare subsp. v... 48 1e-007
gb|CB859019.1|CB859019 HI09A13w HI Hordeum vulgare subsp. v... 44 1e-007
gb|CA011331.1|CA011331 HT06E02u HT Hordeum vulgare subsp. v... 48 1e-007
gb|AL500107.1|AL500107 AL500107 Hordeum vulgare Barke etiol... 55 2e-007
gb|BF623927.2|BF623927 HVSMEa0007M14f Hordeum vulgare seedl... 55 2e-007
gb|BE195060.3|BE195060 HVSMEh0088D01f Hordeum vulgare 5-45 ... 55 2e-007
gb|BF263505.3|BF263505 HV_CEa0006O18f Hordeum vulgare seedl... 55 2e-007
gb|AV912380.1|AV912380 AV912380 K. Sato unpublished cDNA li... 55 2e-007
gb|AV928001.1|AV928001 AV928001 K. Sato unpublished cDNA li... 55 2e-007
gb|AV929747.1|AV929747 AV929747 K. Sato unpublished cDNA li... 55 2e-007
gb|BJ545510.1|BJ545510 BJ545510 K. Sato unpublished cDNA li... 55 2e-007
gb|BJ546282.1|BJ546282 BJ546282 K. Sato unpublished cDNA li... 55 2e-007
gb|BF630667.2|BF630667 HVSMEb0012M20f Hordeum vulgare seedl... 48 2e-007
gb|BJ473754.1|BJ473754 BJ473754 K. Sato unpublished cDNA li... 48 2e-007
gb|BJ458822.1|BJ458822 BJ458822 K. Sato unpublished cDNA li... 48 2e-007
gb|BJ459769.1|BJ459769 BJ459769 K. Sato unpublished cDNA li... 48 2e-007
gb|BG365441.1|BG365441 HVSMEi0002L08f Hordeum vulgare 20 DA... 48 2e-007
gb|BQ662158.1|BQ662158 HR01M24u HR Hordeum vulgare subsp. v... 48 2e-007
gb|AV919354.1|AV919354 AV919354 K. Sato unpublished cDNA li... 54 3e-007
gb|BJ466129.1|BJ466129 BJ466129 K. Sato unpublished cDNA li... 54 3e-007
gb|CA000318.1|CA000318 HS09A03u HS Hordeum vulgare subsp. v... 48 3e-007
gb|AV912606.1|AV912606 AV912606 K. Sato unpublished cDNA li... 48 3e-007
gb|AV919977.1|AV919977 AV919977 K. Sato unpublished cDNA li... 48 3e-007
gb|BQ662183.1|BQ662183 HR01O22u HR Hordeum vulgare subsp. v... 48 3e-007
gb|CA006118.1|CA006118 HU05H21u HU Hordeum vulgare subsp. v... 48 3e-007
gb|BQ664794.1|BQ664794 HV04O11u HV Hordeum vulgare subsp. v... 48 3e-007
gb|BI954140.1|BI954140 HVSMEm0016F19f Hordeum vulgare green... 54 3e-007
gb|AV921900.1|AV921900 AV921900 K. Sato unpublished cDNA li... 48 3e-007
gb|CB858315.1|CB858315 HI06J05w HI Hordeum vulgare subsp. v... 48 3e-007
gb|BJ463795.1|BJ463795 BJ463795 K. Sato unpublished cDNA li... 48 3e-007
gb|BQ659752.1|BQ659752 HF01J17w HF Hordeum vulgare subsp. v... 48 4e-007
gb|CV059036.1|CV059036 BNEL43f6 Barley EST endosperm librar... 53 4e-007
gb|BJ467970.1|BJ467970 BJ467970 K. Sato unpublished cDNA li... 48 4e-007
gb|AV918813.1|AV918813 AV918813 K. Sato unpublished cDNA li... 48 4e-007
gb|AV917652.1|AV917652 AV917652 K. Sato unpublished cDNA li... 48 4e-007
gb|BQ661549.1|BQ661549 HM03P05u HM Hordeum vulgare subsp. v... 53 5e-007
gb|BM373002.2|BM373002 EBma04_SQ002_L05_R maternal, 10 DPA,... 53 5e-007
gb|BF253999.2|BF253999 HVSMEf0002L11f Hordeum vulgare seedl... 48 5e-007
gb|BG365882.1|BG365882 HVSMEi0004J22f Hordeum vulgare 20 DA... 48 6e-007
gb|CA024997.1|CA024997 HZ50O20r HZ Hordeum vulgare subsp. v... 52 9e-007
gb|BJ468562.1|BJ468562 BJ468562 K. Sato unpublished cDNA li... 51 2e-006
gb|BQ756549.1|BQ756549 EBem09_SQ003_A16_R embryo, 1 Day ger... 51 2e-006
gb|BF261097.2|BF261097 HVSMEf0023M01f Hordeum vulgare seedl... 51 2e-006
gb|BE214176.3|BE214176 HV_CEb0002I18f Hordeum vulgare seedl... 51 2e-006
gb|CA009798.1|CA009798 HT12K07u HT Hordeum vulgare subsp. v... 51 2e-006
gb|BG301241.1|BG301241 HVSMEb0020C10f Hordeum vulgare seedl... 44 3e-006
gb|BE437689.1|BE437689 SFR006.D12F990705 ITEC SFR Barley Le... 49 1e-005
gb|AV832993.1|AV832993 AV832993 K. Sato unpublished cDNA li... 49 1e-005
gb|BJ468579.1|BJ468579 BJ468579 K. Sato unpublished cDNA li... 48 2e-005
gb|AL508271.1|AL508271 AL508271 Hordeum vulgare Barke devel... 47 3e-005
gb|AV921085.1|AV921085 AV921085 K. Sato unpublished cDNA li... 42 4e-005
gb|BM373123.2|BM373123 EBma04_SQ003_D03_R maternal, 10 DPA,... 45 1e-004
gb|AJ462184.1|AJ462184 AJ462184 S00002 Hordeum vulgare subs... 39 2e-004
gb|BQ661030.1|BQ661030 HM01J08w HM Hordeum vulgare subsp. v... 35 8e-004
gb|BI948933.1|BI948933 HVSMEl0011I20f Hordeum vulgare spike... 31 0.002
gb|BF254222.2|BF254222 HVSMEf0003F20f Hordeum vulgare seedl... 39 0.009
gb|BG300683.1|BG300683 HVSMEb0017P19f Hordeum vulgare seedl... 37 0.032
gb|BG417583.2|BG417583 HVSMEk0018E23f Hordeum vulgare testa... 37 0.032
gb|BQ766937.1|BQ766937 EBro08_SQ007_D17_R root, 3 week, dro... 37 0.032
gb|CD663528.1|CD663528 UCRHV18_05db04_b1 Drought-stressed D... 37 0.044
gb|AL511146.1|AL511146 AL511146 Hordeum vulgare Barke devel... 33 0.054
gb|CK123812.1|CK123812 BES1824105g21 BES1824 Hordeum vulgar... 33 0.058
gb|AL507887.1|AL507887 AL507887 Hordeum vulgare Barke devel... 33 0.060
gb|BQ764277.1|BQ764277 EBan01_SQ005_K10_R anther, yellow st... 36 0.060
gb|BE215503.2|BE215503 HV_CEb0006P17f Hordeum vulgare seedl... 29 0.11
gb|BI958216.1|BI958216 HVSMEn0013O15f Hordeum vulgare rachi... 35 0.11
gb|BU981780.1|BU981780 HA24J23r HA Hordeum vulgare subsp. v... 33 0.20
gb|BE231065.1|BE231065 HVSMEg0016D19f Hordeum vulgare pre-a... 35 0.21
gb|BQ657771.1|BQ657771 HA07B03u HA Hordeum vulgare subsp. v... 33 0.29
gb|BQ460161.1|BQ460161 HA07B03r HA Hordeum vulgare subsp. v... 33 0.31
gb|BQ460163.1|BQ460163 HA07A15r HA Hordeum vulgare subsp. v... 33 0.31
gb|BU982768.1|BU982768 HA27I22r HA Hordeum vulgare subsp. v... 33 0.36
gb|BM816954.1|BM816954 HC05C03_T3.ab1 HC Hordeum vulgare su... 34 0.40
gb|AY681974.1| Hordeum vulgare subsp. vulgare dehydrin 13 (... 34 0.40
gb|BM374101.1|BM374101 EBma03_SQ003_K10_R maternal, 8 DPA, ... 34 0.40
gb|AJ433381.1|AJ433381 AJ433381 S00002 Hordeum vulgare subs... 34 0.40
gb|BJ469496.1|BJ469496 BJ469496 K. Sato unpublished cDNA li... 34 0.40
gb|BJ469498.1|BJ469498 BJ469498 K. Sato unpublished cDNA li... 34 0.40
gb|BJ474793.1|BJ474793 BJ474793 K. Sato unpublished cDNA li... 34 0.40
gb|BJ474905.1|BJ474905 BJ474905 K. Sato unpublished cDNA li... 34 0.40
gb|BQ658245.1|BQ658245 HB09P08w BC Hordeum vulgare subsp. v... 34 0.40
gb|BQ740128.1|BQ740128 HC108F02 HC Hordeum vulgare subsp. v... 34 0.40
gb|BM097437.2|BM097437 EBro05_SQ003_E03_R root, 3 week, red... 34 0.40
gb|BQ757445.1|BQ757445 EBem10_SQ004_C10_R embryo, 2 Day ger... 34 0.40
gb|BQ757940.1|BQ757940 EBem10_SQ005_M09_R embryo, 2 Day ger... 34 0.40
gb|BQ757944.1|BQ757944 EBem10_SQ005_M13_R embryo, 2 Day ger... 34 0.40
gb|BQ762984.1|BQ762984 EBro02_SQ006_D20 _R root, 3 week, hy... 34 0.40
gb|BQ765784.1|BQ765784 EBro03_SQ008_L05_R root, 3 week, wat... 34 0.40
gb|BQ767341.1|BQ767341 EBro08_SQ008_K13_R root, 3 week, dro... 34 0.40
gb|BU969231.1|BU969231 HB10O24r BC Hordeum vulgare subsp. v... 34 0.40
gb|BU994424.1|BU994424 HM07A11r HM Hordeum vulgare subsp. v... 34 0.40
gb|BU994720.1|BU994720 HM07P14r HM Hordeum vulgare subsp. v... 34 0.40
gb|BU995506.1|BU995506 HM10H09r HM Hordeum vulgare subsp. v... 34 0.40
gb|CA025417.1|CA025417 HZ52B17r HZ Hordeum vulgare subsp. v... 34 0.40
gb|CB879946.1|CB879946 HM05A11w HM Hordeum vulgare subsp. v... 34 0.40
gb|CB881628.1|CB881628 HM10G10w HM Hordeum vulgare subsp. v... 34 0.40
gb|CD663392.1|CD663392 UCRHV18_05bd03_b1 Drought-stressed D... 34 0.40
gb|CK125866.1|CK125866 BES1824111A1e10 BES1824 Hordeum vulg... 34 0.40
gb|AL508517.1|AL508517 AL508517 Hordeum vulgare Barke devel... 27 0.43
gb|BF256979.2|BF256979 HVSMEf0011I13f Hordeum vulgare seedl... 33 0.55
gb|BE422314.1|BE422314 HWM022cH.10r ITEC HWM Barley Leaf Li... 33 0.76
gb|AL509522.1|AL509522 AL509522 Hordeum vulgare Barke devel... 33 0.76
gb|BI951160.1|BI951160 HVSMEl0024M10f Hordeum vulgare spike... 33 0.76
gb|BG369895.2|BG369895 HVSMEi0026H07f Hordeum vulgare 20 DA... 33 0.76
gb|BJ450878.1|BJ450878 BJ450878 K. Sato unpublished cDNA li... 33 0.76
gb|BJ458366.1|BJ458366 BJ458366 K. Sato unpublished cDNA li... 33 0.76
gb|BQ460512.1|BQ460512 HA09F17r HA Hordeum vulgare subsp. v... 33 0.76
gb|BM100420.2|BM100420 EBma01_SQ005_C18_R maternal, 4 DPA, ... 33 0.76
gb|BQ763711.1|BQ763711 EBro03_SQ005_P01_R root, 3 week, wat... 33 0.76
gb|BU972104.1|BU972104 HB20J23r BC Hordeum vulgare subsp. v... 33 0.76
gb|BU980153.1|BU980153 HA18N04r HA Hordeum vulgare subsp. v... 33 0.76
gb|BU980951.1|BU980951 HA22C23r HA Hordeum vulgare subsp. v... 33 0.76
gb|BU981379.1|BU981379 HA23H02r HA Hordeum vulgare subsp. v... 33 0.76
gb|BU982312.1|BU982312 HA26C08r HA Hordeum vulgare subsp. v... 33 0.76
gb|BU982447.1|BU982447 HA26J08r HA Hordeum vulgare subsp. v... 33 0.76
gb|BU982639.1|BU982639 HA27C13r HA Hordeum vulgare subsp. v... 33 0.76
gb|BU983230.1|BU983230 HA28P13r HA Hordeum vulgare subsp. v... 33 0.76
gb|CA011702.1|CA011702 HT03F02r HT Hordeum vulgare subsp. v... 33 0.76
dbj|AB011268.1| Hordeum vulgare hvnas5-2 mRNA for nicotiana... 33 0.76
gb|BE193844.2|BE193844 HVSMEh0082K24f Hordeum vulgare 5-45 ... 25 1.2
gb|BM442229.2|BM442229 EBan01_SQ002_J13_R anther, yellow st... 25 1.3
gb|BM817293.1|BM817293 HC108B12_SK.ab1 HC Hordeum vulgare s... 31 2.7
gb|AL500698.1|AL500698 AL500698 Hordeum vulgare Barke roots... 30 3.7
gb|BG301062.1|BG301062 HVSMEb0019G03f Hordeum vulgare seedl... 30 3.7
gb|BG367462.1|BG367462 HVSMEi0012F15f Hordeum vulgare 20 DA... 30 3.7
gb|BI953897.1|BI953897 HVSMEm0015E13f Hordeum vulgare green... 30 3.7
gb|BI956147.1|BI956147 HVSMEm0025M24f Hordeum vulgare green... 30 3.7
gb|BE455570.3|BE455570 HVSMEg0017N21f Hordeum vulgare pre-a... 30 3.7
gb|BE602567.3|BE602567 HVSMEh0100A07f Hordeum vulgare 5-45 ... 30 3.7
gb|AV920026.1|AV920026 AV920026 K. Sato unpublished cDNA li... 30 3.7
gb|AV934318.1|AV934318 AV934318 K. Sato unpublished cDNA li... 30 3.7
gb|BQ740104.1|BQ740104 HC105B11 HC Hordeum vulgare subsp. v... 30 3.7
gb|BM442251.2|BM442251 EBan01_SQ002_K14_R anther, yellow st... 30 3.7
gb|BM442782.2|BM442782 EBro02_SQ001_D09_R root, 3 week, hyd... 30 3.7
gb|BI777215.2|BI777215 EBro03_SQ002_H10_R root, 3 week, wat... 30 3.7
gb|BU997534.1|BU997534 HI08E10r HI Hordeum vulgare subsp. v... 30 3.7
gb|CA007716.1|CA007716 HU08M06r HU Hordeum vulgare subsp. v... 30 3.7
gb|CV061609.1|CV061609 BNEL6H2 Barley EST endosperm library... 30 3.7
gb|AL500237.1|AL500237 AL500237 Hordeum vulgare Barke etiol... 30 5.1
gb|AL500857.1|AL500857 AL500857 Hordeum vulgare Barke roots... 30 5.1
gb|AL502522.1|AL502522 AL502522 Hordeum vulgare Barke roots... 30 5.1
gb|AL506960.1|AL506960 AL506960 Hordeum vulgare Barke devel... 30 5.1
gb|AL508393.1|AL508393 AL508393 Hordeum vulgare Barke devel... 30 5.1
gb|AL511611.1|AL511611 AL511611 Hordeum vulgare Barke devel... 30 5.1
gb|BF259936.2|BF259936 HVSMEf0020K17f Hordeum vulgare seedl... 30 5.1
gb|BG365707.1|BG365707 HVSMEi0003N23f Hordeum vulgare 20 DA... 30 5.1
gb|BI946677.1|BI946677 HVSMEl0001K10f Hordeum vulgare spike... 30 5.1
gb|BI956311.1|BI956311 HVSMEn0002E17f Hordeum vulgare rachi... 30 5.1
gb|BE216751.1|BE216751 HV_CEb0011H08f Hordeum vulgare seedl... 30 5.1
gb|BF261852.2|BF261852 HV_CEa0002G10f Hordeum vulgare seedl... 30 5.1
gb|BG416582.1|BG416582 HVSMEk0013C16f Hordeum vulgare testa... 30 5.1
gb|AV913333.1|AV913333 AV913333 K. Sato unpublished cDNA li... 30 5.1
gb|AV913339.1|AV913339 AV913339 K. Sato unpublished cDNA li... 30 5.1
gb|AV913386.1|AV913386 AV913386 K. Sato unpublished cDNA li... 30 5.1
gb|AV917503.1|AV917503 AV917503 K. Sato unpublished cDNA li... 30 5.1
gb|AV917698.1|AV917698 AV917698 K. Sato unpublished cDNA li... 30 5.1
gb|AV918633.1|AV918633 AV918633 K. Sato unpublished cDNA li... 30 5.1
gb|AV919147.1|AV919147 AV919147 K. Sato unpublished cDNA li... 30 5.1
gb|AV919994.1|AV919994 AV919994 K. Sato unpublished cDNA li... 30 5.1
gb|AV920328.1|AV920328 AV920328 K. Sato unpublished cDNA li... 30 5.1
gb|AV920522.1|AV920522 AV920522 K. Sato unpublished cDNA li... 30 5.1
gb|AV921631.1|AV921631 AV921631 K. Sato unpublished cDNA li... 30 5.1
gb|AV921636.1|AV921636 AV921636 K. Sato unpublished cDNA li... 30 5.1
gb|AV921643.1|AV921643 AV921643 K. Sato unpublished cDNA li... 30 5.1
gb|AV922163.1|AV922163 AV922163 K. Sato unpublished cDNA li... 30 5.1
gb|AV925547.1|AV925547 AV925547 K. Sato unpublished cDNA li... 30 5.1
gb|AV928271.1|AV928271 AV928271 K. Sato unpublished cDNA li... 30 5.1
gb|AV930692.1|AV930692 AV930692 K. Sato unpublished cDNA li... 30 5.1
gb|BM816213.1|BM816213 HC107F11_SK.ab1 HC Hordeum vulgare s... 30 5.1
gb|AJ434856.1|AJ434856 AJ434856 S00002 Hordeum vulgare subs... 30 5.1
gb|AJ462062.1|AJ462062 AJ462062 S00002 Hordeum vulgare subs... 30 5.1
gb|BJ449422.1|BJ449422 BJ449422 K. Sato unpublished cDNA li... 30 5.1
gb|BQ471938.1|BQ471938 HV03O22r HV Hordeum vulgare subsp. v... 30 5.1
gb|BQ472144.1|BQ472144 HV04I14r HV Hordeum vulgare subsp. v... 30 5.1
gb|BQ656291.1|BQ656291 HA05A11u HA Hordeum vulgare subsp. v... 30 5.1
gb|BQ660986.1|BQ660986 HM01G10w HM Hordeum vulgare subsp. v... 30 5.1
gb|BQ663605.1|BQ663605 HU03F09u HU Hordeum vulgare subsp. v... 30 5.1
gb|BQ663650.1|BQ663650 HU03O10u HU Hordeum vulgare subsp. v... 30 5.1
gb|BQ664576.1|BQ664576 HV03O22u HV Hordeum vulgare subsp. v... 30 5.1
gb|BQ664716.1|BQ664716 HV04I14u HV Hordeum vulgare subsp. v... 30 5.1
gb|BI780709.2|BI780709 EBes01_SQ001_O04_R embryo sac, 4-6 D... 30 5.1
gb|BM100132.2|BM100132 EBma01_SQ001_E15_R maternal, 4 DPA, ... 30 5.1
gb|BM100361.2|BM100361 EBma01_SQ001_P19_R maternal, 4 DPA, ... 30 5.1
gb|BI778669.2|BI778669 EBro01_SQ001_A07_R root, 3 week, hyd... 30 5.1
gb|BI779482.2|BI779482 EBro01_SQ004_C24_R root, 3 week, hyd... 30 5.1
gb|BQ766642.1|BQ766642 EBro08_SQ006_O17_R root, 3 week, dro... 30 5.1
gb|BQ766727.1|BQ766727 EBro08_SQ006_O24_R root, 3 week, dro... 30 5.1
gb|BI777612.2|BI777612 EBro04_SQ001_M05_R root, 3 week, sal... 30 5.1
gb|BU977212.1|BU977212 HA11A13u HA Hordeum vulgare subsp. v... 30 5.1
gb|BU986254.1|BU986254 HF11C20r HF Hordeum vulgare subsp. v... 30 5.1
gb|BU986308.1|BU986308 HF11G01r HF Hordeum vulgare subsp. v... 30 5.1
gb|BU987956.1|BU987956 HF16E05r HF Hordeum vulgare subsp. v... 30 5.1
gb|CA000950.1|CA000950 HS06B11u HS Hordeum vulgare subsp. v... 30 5.1
gb|CA016552.1|CA016552 HV08E11u HV Hordeum vulgare subsp. v... 30 5.1
gb|CA018317.1|CA018317 HV08E11r HV Hordeum vulgare subsp. v... 30 5.1
gb|CA026695.1|CA026695 HZ56K17r HZ Hordeum vulgare subsp. v... 30 5.1
gb|CA027187.1|CA027187 HZ58C10r HZ Hordeum vulgare subsp. v... 30 5.1
gb|BJ545314.1|BJ545314 BJ545314 K. Sato unpublished cDNA li... 30 5.1
gb|BJ545852.1|BJ545852 BJ545852 K. Sato unpublished cDNA li... 30 5.1
gb|BJ546086.1|BJ546086 BJ546086 K. Sato unpublished cDNA li... 30 5.1
gb|BJ546136.1|BJ546136 BJ546136 K. Sato unpublished cDNA li... 30 5.1
gb|BJ546674.1|BJ546674 BJ546674 K. Sato unpublished cDNA li... 30 5.1
gb|BJ546678.1|BJ546678 BJ546678 K. Sato unpublished cDNA li... 30 5.1
gb|BJ549315.1|BJ549315 BJ549315 K. Sato unpublished cDNA li... 30 5.1
gb|BJ549822.1|BJ549822 BJ549822 K. Sato unpublished cDNA li... 30 5.1
gb|BJ549970.1|BJ549970 BJ549970 K. Sato unpublished cDNA li... 30 5.1
gb|BJ550037.1|BJ550037 BJ550037 K. Sato unpublished cDNA li... 30 5.1
gb|BJ550039.1|BJ550039 BJ550039 K. Sato unpublished cDNA li... 30 5.1
gb|BJ550093.1|BJ550093 BJ550093 K. Sato unpublished cDNA li... 30 5.1
gb|BJ550104.1|BJ550104 BJ550104 K. Sato unpublished cDNA li... 30 5.1
gb|BJ550161.1|BJ550161 BJ550161 K. Sato unpublished cDNA li... 30 5.1
gb|CB859470.1|CB859470 HI10I23w HI Hordeum vulgare subsp. v... 30 5.1
gb|CB859498.1|CB859498 HI10K10w HI Hordeum vulgare subsp. v... 30 5.1
gb|CB860109.1|CB860109 HI12L01w HI Hordeum vulgare subsp. v... 30 5.1
gb|AL506705.1|AL506705 AL506705 Hordeum vulgare Barke devel... 29 7.0
gb|BF268029.2|BF268029 HV_CEa0019K07f Hordeum vulgare seedl... 29 7.0
gb|BE230862.2|BE230862 HVSMEg0001A10f Hordeum vulgare pre-a... 29 7.0
gb|AV918640.1|AV918640 AV918640 K. Sato unpublished cDNA li... 29 7.0
gb|BU983179.1|BU983179 HA28M21r HA Hordeum vulgare subsp. v... 29 7.0
gb|BU989678.1|BU989678 HF22G10r HF Hordeum vulgare subsp. v... 29 7.0
gb|AL500488.1|AL500488 AL500488 Hordeum vulgare Barke etiol... 29 9.7
gb|BF619838.2|BF619838 HVSMEc0009G10f Hordeum vulgare seedl... 29 9.7
gb|BF265828.2|BF265828 HV_CEa0013H03f Hordeum vulgare seedl... 29 9.7
gb|BF267388.2|BF267388 HV_CEa0017M10f Hordeum vulgare seedl... 29 9.7
gb|BF264362.3|BF264362 HV_CEa0009D13f Hordeum vulgare seedl... 29 9.7
gb|BF265196.3|BF265196 HV_CEa0011I17f Hordeum vulgare seedl... 29 9.7
gb|BM099441.1|BM099441 EBes01_SQ003_E04_R embryo sac, 4-6 D... 29 9.7
gb|AV923752.1|AV923752 AV923752 K. Sato unpublished cDNA li... 29 9.7
gb|AV927277.1|AV927277 AV927277 K. Sato unpublished cDNA li... 29 9.7
gb|BI780696.2|BI780696 EBes01_SQ001_N03_R embryo sac, 4-6 D... 29 9.7
gb|BM099762.2|BM099762 EBes01_SQ004_D08_R embryo sac, 4-6 D... 29 9.7
gb|CB878040.1|CB878040 HP07C04T HP Hordeum vulgare subsp. v... 29 9.7
gb|CB878458.1|CB878458 HP08J19T HP Hordeum vulgare subsp. v... 29 9.7
gb|CB879114.1|CB879114 HP10P19T HP Hordeum vulgare subsp. v... 29 9.7
gb|BJ460100.1|BJ460100 BJ460100 K. Sato unpublished cDNA li... 26 9.9
>gb|BQ472310.1|BQ472310 HB09P08T BC Hordeum vulgare subsp. vulgare cDNA clone HB09P08
5-PRIME, mRNA sequence
Length = 654
Score = 89.5 bits (189), Expect = 6e-018
Identities = 33/60 (55%), Positives = 41/60 (68%)
Frame = +2 / +2
Query: 5 GSNVQGYFAWSLLDNFEWFAGFTERYGIVYVDRNNNCTRYMKESAKWLKEFNTAKKPSKK 184
G++V+GYFAWS LDNFEW GFT+R+GIVYVD N +R+ K SA W F + P K
Sbjct: 20 GADVRGYFAWSFLDNFEWAMGFTKRFGIVYVDYKNGLSRHPKASAMWFSRFLNGEAPDSK 199
Score = 44.1 bits (90), Expect = 3e-004
Identities = 24/48 (50%), Positives = 27/48 (56%)
Frame = -1 / -1
Query: 147 NHLADSFM*RVQLLLRST*TMP*RSVKPANHSKLSSRDQAK*PCTFDP 4
NH+AD+ R L ST*T+P V P HSKLS D AK P T P
Sbjct: 162 NHMADALGCRESPFL*ST*TIPNLLVNPIAHSKLSRNDHAKYPRTSAP 19
>gb|BU968577.1|BU968577 HB07P08r BC Hordeum vulgare subsp. vulgare cDNA clone HB07P08
5-PRIME, mRNA sequence
Length = 454
Score = 89.5 bits (189), Expect = 6e-018
Identities = 33/60 (55%), Positives = 41/60 (68%)
Frame = +2 / +2
Query: 5 GSNVQGYFAWSLLDNFEWFAGFTERYGIVYVDRNNNCTRYMKESAKWLKEFNTAKKPSKK 184
G++V+GYFAWS LDNFEW GFT+R+GIVYVD N +R+ K SA W F + P K
Sbjct: 20 GADVRGYFAWSFLDNFEWAMGFTKRFGIVYVDYKNGLSRHPKASAMWFSRFLNGEAPDSK 199
Score = 44.1 bits (90), Expect = 3e-004
Identities = 24/48 (50%), Positives = 27/48 (56%)
Frame = -1 / -2
Query: 147 NHLADSFM*RVQLLLRST*TMP*RSVKPANHSKLSSRDQAK*PCTFDP 4
NH+AD+ R L ST*T+P V P HSKLS D AK P T P
Sbjct: 162 NHMADALGCRESPFL*ST*TIPNLLVNPIAHSKLSRNDHAKYPRTSAP 19
>gb|BQ661086.1|BQ661086 HM01N16w HM Hordeum vulgare subsp. vulgare cDNA clone HM01N16
3-PRIME, mRNA sequence
Length = 580
Score = 70.7 bits (148), Expect(2) = 4e-014
Identities = 25/34 (73%), Positives = 29/34 (85%)
Frame = +2 / -1
Query: 5 GSNVQGYFAWSLLDNFEWFAGFTERYGIVYVDRN 106
G+ V GYFAWSLLDNFEW GFT ++G+VYVDRN
Sbjct: 379 GARVTGYFAWSLLDNFEWRMGFTSKFGLVYVDRN 278
Score = 46.9 bits (96), Expect = 4e-005
Identities = 22/35 (62%), Positives = 23/35 (65%)
Frame = -1 / +3
Query: 108 LLRST*TMP*RSVKPANHSKLSSRDQAK*PCTFDP 4
+ RST*T P VKP HSKLSS D AK*P T P
Sbjct: 276 VFRST*TSPNLEVKPIRHSKLSSSDHAK*PVTLAP 380
Score = 37.3 bits (75), Expect = 0.032
Identities = 16/29 (55%), Positives = 18/29 (62%)
Frame = -2 / +1
Query: 107 CCGRRRQCHNVR*SRQTIQSCPAETKRSS 21
C GRRR+ R*S +SCPA T RSS
Sbjct: 277 CSGRRRRARTWR*SPSATRSCPAATTRSS 363
Score = 34.1 bits (68), Expect = 0.29
Identities = 14/20 (70%), Positives = 15/20 (75%)
Frame = -3 / +2
Query: 73 GEAGKPFKVVQQRPSEVALH 14
GEA P +VVQQRP EVA H
Sbjct: 311 GEAHPPLEVVQQRPREVARH 370
Score = 29.9 bits (59), Expect = 5.1
Identities = 12/19 (63%), Positives = 14/19 (73%)
Frame = +3 / -2
Query: 18 KATSLGLCWTTLNGLPASP 74
+ATS G CWTT +G ASP
Sbjct: 366 RATSRGRCWTTSSGGWASP 310
Score = 24.0 bits (46), Expect(2) = 4e-014
Identities = 7/16 (43%), Positives = 11/16 (68%)
Frame = +2 / -1
Query: 107 NNCTRYMKESAKWLKE 154
N TRY K+S +W ++
Sbjct: 280 NTFTRYPKDSTRWFRK 233
>gb|BQ764256.1|BQ764256 EBan01_SQ005_G11_R anther, yellow stage, no treatment, cv Optic,
EBan01 Hordeum vulgare subsp. vulgare cDNA clone
EBan01_SQ005_G11 5', mRNA sequence
Length = 608
Score = 70.7 bits (148), Expect(2) = 4e-014
Identities = 25/34 (73%), Positives = 29/34 (85%)
Frame = +2 / +2
Query: 5 GSNVQGYFAWSLLDNFEWFAGFTERYGIVYVDRN 106
G+ V GYFAWSLLDNFEW GFT ++G+VYVDRN
Sbjct: 248 GARVTGYFAWSLLDNFEWRMGFTSKFGLVYVDRN 349
Score = 46.9 bits (96), Expect = 4e-005
Identities = 22/35 (62%), Positives = 23/35 (65%)
Frame = -1 / -3
Query: 108 LLRST*TMP*RSVKPANHSKLSSRDQAK*PCTFDP 4
+ RST*T P VKP HSKLSS D AK*P T P
Sbjct: 351 VFRST*TSPNLEVKPIRHSKLSSSDHAK*PVTLAP 247
Score = 37.3 bits (75), Expect = 0.032
Identities = 16/29 (55%), Positives = 18/29 (62%)
Frame = -2 / -1
Query: 107 CCGRRRQCHNVR*SRQTIQSCPAETKRSS 21
C GRRR+ R*S +SCPA T RSS
Sbjct: 350 CSGRRRRARTWR*SPSATRSCPAATTRSS 264
Score = 34.1 bits (68), Expect = 0.29
Identities = 14/20 (70%), Positives = 15/20 (75%)
Frame = -3 / -2
Query: 73 GEAGKPFKVVQQRPSEVALH 14
GEA P +VVQQRP EVA H
Sbjct: 316 GEAHPPLEVVQQRPREVARH 257
Score = 29.9 bits (59), Expect = 5.1
Identities = 12/19 (63%), Positives = 14/19 (73%)
Frame = +3 / +3
Query: 18 KATSLGLCWTTLNGLPASP 74
+ATS G CWTT +G ASP
Sbjct: 261 RATSRGRCWTTSSGGWASP 317
Score = 24.0 bits (46), Expect(2) = 4e-014
Identities = 7/16 (43%), Positives = 11/16 (68%)
Frame = +2 / +2
Query: 107 NNCTRYMKESAKWLKE 154
N TRY K+S +W ++
Sbjct: 347 NTFTRYPKDSTRWFRK 394
>gb|BM100134.2|BM100134 EBma01_SQ001_E17_R maternal, 4 DPA, no treatment, cv Optic, EBma01
Hordeum vulgare subsp. vulgare cDNA clone
EBma01_SQ001_E17 5', mRNA sequence
Length = 436
Score = 69.8 bits (146), Expect(2) = 2e-013
Identities = 24/32 (75%), Positives = 29/32 (90%)
Frame = +2 / +1
Query: 5 GSNVQGYFAWSLLDNFEWFAGFTERYGIVYVD 100
G+NV GYFAWSLLDNFEW +G+T ++GIVYVD
Sbjct: 103 GANVVGYFAWSLLDNFEWLSGYTSKFGIVYVD 198
Score = 47.8 bits (98), Expect = 2e-005
Identities = 22/35 (62%), Positives = 26/35 (74%)
Frame = -1 / -3
Query: 108 LLRST*TMP*RSVKPANHSKLSSRDQAK*PCTFDP 4
+++ST TMP V P +HSKLS RDQAK*P TF P
Sbjct: 206 VVKSTYTMPNLEV*PDSHSKLSRRDQAK*PTTFAP 102
Score = 22.1 bits (42), Expect(2) = 2e-013
Identities = 8/21 (38%), Positives = 13/21 (61%)
Frame = +3 / +2
Query: 138 PSG*KSSTPRKSPARRFLRQL 200
P+G ++ R+ PAR+ R L
Sbjct: 233 PTGSRTCCRRRGPARKMARSL 295
>gb|AV916876.1|AV916876 AV916876 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags19o23 5', mRNA sequence
Length = 547
Score = 69.8 bits (146), Expect(2) = 3e-013
Identities = 24/32 (75%), Positives = 29/32 (90%)
Frame = +2 / +3
Query: 5 GSNVQGYFAWSLLDNFEWFAGFTERYGIVYVD 100
G+NV GYFAWSLLDNFEW +G+T ++GIVYVD
Sbjct: 99 GANVVGYFAWSLLDNFEWLSGYTSKFGIVYVD 194
Score = 47.8 bits (98), Expect = 2e-005
Identities = 22/35 (62%), Positives = 26/35 (74%)
Frame = -1 / -1
Query: 108 LLRST*TMP*RSVKPANHSKLSSRDQAK*PCTFDP 4
+++ST TMP V P +HSKLS RDQAK*P TF P
Sbjct: 202 VVKSTYTMPNLEV*PDSHSKLSRRDQAK*PTTFAP 98
Score = 22.1 bits (42), Expect(2) = 3e-013
Identities = 8/21 (38%), Positives = 13/21 (61%)
Frame = +3 / +1
Query: 138 PSG*KSSTPRKSPARRFLRQL 200
P+G ++ R+ PAR+ R L
Sbjct: 229 PTGSRTCCRRRGPARKMARSL 291
>gb|AV922174.1|AV922174 AV922174 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags19o23 3', mRNA sequence
Length = 581
Score = 69.8 bits (146), Expect(2) = 3e-013
Identities = 24/32 (75%), Positives = 29/32 (90%)
Frame = +2 / -2
Query: 5 GSNVQGYFAWSLLDNFEWFAGFTERYGIVYVD 100
G+NV GYFAWSLLDNFEW +G+T ++GIVYVD
Sbjct: 499 GANVVGYFAWSLLDNFEWLSGYTSKFGIVYVD 404
Score = 47.8 bits (98), Expect = 2e-005
Identities = 22/35 (62%), Positives = 26/35 (74%)
Frame = -1 / +3
Query: 108 LLRST*TMP*RSVKPANHSKLSSRDQAK*PCTFDP 4
+++ST TMP V P +HSKLS RDQAK*P TF P
Sbjct: 396 VVKSTYTMPNLEV*PDSHSKLSRRDQAK*PTTFAP 500
Score = 22.1 bits (42), Expect(2) = 3e-013
Identities = 8/21 (38%), Positives = 13/21 (61%)
Frame = +3 / -3
Query: 138 PSG*KSSTPRKSPARRFLRQL 200
P+G ++ R+ PAR+ R L
Sbjct: 369 PTGSRTCCRRRGPARKMARSL 307
>gb|BJ466112.1|BJ466112 BJ466112 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags28l23 3', mRNA sequence
Length = 581
Score = 69.8 bits (146), Expect(2) = 3e-013
Identities = 24/32 (75%), Positives = 29/32 (90%)
Frame = +2 / -1
Query: 5 GSNVQGYFAWSLLDNFEWFAGFTERYGIVYVD 100
G+NV GYFAWSLLDNFEW +G+T ++GIVYVD
Sbjct: 572 GANVVGYFAWSLLDNFEWLSGYTSKFGIVYVD 477
Score = 47.8 bits (98), Expect = 2e-005
Identities = 22/35 (62%), Positives = 26/35 (74%)
Frame = -1 / +1
Query: 108 LLRST*TMP*RSVKPANHSKLSSRDQAK*PCTFDP 4
+++ST TMP V P +HSKLS RDQAK*P TF P
Sbjct: 469 VVKSTYTMPNLEV*PDSHSKLSRRDQAK*PTTFAP 573
Score = 22.1 bits (42), Expect(2) = 3e-013
Identities = 8/21 (38%), Positives = 13/21 (61%)
Frame = +3 / -2
Query: 138 PSG*KSSTPRKSPARRFLRQL 200
P+G ++ R+ PAR+ R L
Sbjct: 442 PTGSRTCCRRRGPARKMARSL 380
>gb|CA028544.1|CA028544 HZ62G02r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ62G02
5-PRIME, mRNA sequence
Length = 552
Score = 69.8 bits (146), Expect(2) = 5e-013
Identities = 24/32 (75%), Positives = 29/32 (90%)
Frame = +2 / +1
Query: 5 GSNVQGYFAWSLLDNFEWFAGFTERYGIVYVD 100
G+NV GYFAWSLLDNFEW +G+T ++GIVYVD
Sbjct: 25 GANVVGYFAWSLLDNFEWLSGYTSKFGIVYVD 120
Score = 47.8 bits (98), Expect = 2e-005
Identities = 22/35 (62%), Positives = 26/35 (74%)
Frame = -1 / -2
Query: 108 LLRST*TMP*RSVKPANHSKLSSRDQAK*PCTFDP 4
+++ST TMP V P +HSKLS RDQAK*P TF P
Sbjct: 128 VVKSTYTMPNLEV*PDSHSKLSRRDQAK*PTTFAP 24
Score = 21.2 bits (40), Expect(2) = 5e-013
Identities = 8/21 (38%), Positives = 13/21 (61%)
Frame = +3 / +2
Query: 138 PSG*KSSTPRKSPARRFLRQL 200
P+G ++ R+ PAR+ R L
Sbjct: 155 PTGSRTCCRRRGPARKTARSL 217
>gb|CB858437.1|CB858437 HI07A02w HI Hordeum vulgare subsp. vulgare cDNA clone HI07A02
3-PRIME, mRNA sequence
Length = 653
Score = 69.8 bits (146), Expect(2) = 6e-013
Identities = 24/32 (75%), Positives = 29/32 (90%)
Frame = +2 / -1
Query: 5 GSNVQGYFAWSLLDNFEWFAGFTERYGIVYVD 100
G+NV GYFAWSLLDNFEW +G+T ++GIVYVD
Sbjct: 209 GANVVGYFAWSLLDNFEWLSGYTSKFGIVYVD 114
Score = 47.8 bits (98), Expect = 2e-005
Identities = 22/35 (62%), Positives = 26/35 (74%)
Frame = -1 / +1
Query: 108 LLRST*TMP*RSVKPANHSKLSSRDQAK*PCTFDP 4
+++ST TMP V P +HSKLS RDQAK*P TF P
Sbjct: 106 VVKSTYTMPNLEV*PDSHSKLSRRDQAK*PTTFAP 210
Score = 21.2 bits (40), Expect(2) = 6e-013
Identities = 8/21 (38%), Positives = 13/21 (61%)
Frame = +3 / -2
Query: 138 PSG*KSSTPRKSPARRFLRQL 200
P+G ++ R+ PAR+ R L
Sbjct: 79 PTGSRTCCRRRGPARKTARSL 17
>gb|CV054913.1|CV054913 BNEL114f9 Barley EST endosperm library Hordeum vulgare subsp.
vulgare cDNA clone BNEL114f9 5' similar to putative
beta-glucosidase, mRNA sequence
Length = 714
Score = 69.8 bits (146), Expect(2) = 6e-013
Identities = 24/32 (75%), Positives = 29/32 (90%)
Frame = +2 / +3
Query: 5 GSNVQGYFAWSLLDNFEWFAGFTERYGIVYVD 100
G+NV GYFAWSLLDNFEW +G+T ++GIVYVD
Sbjct: 135 GANVVGYFAWSLLDNFEWLSGYTSKFGIVYVD 230
Score = 47.8 bits (98), Expect = 2e-005
Identities = 22/35 (62%), Positives = 26/35 (74%)
Frame = -1 / -3
Query: 108 LLRST*TMP*RSVKPANHSKLSSRDQAK*PCTFDP 4
+++ST TMP V P +HSKLS RDQAK*P TF P
Sbjct: 238 VVKSTYTMPNLEV*PDSHSKLSRRDQAK*PTTFAP 134
Score = 21.2 bits (40), Expect(2) = 6e-013
Identities = 8/21 (38%), Positives = 13/21 (61%)
Frame = +3 / +1
Query: 138 PSG*KSSTPRKSPARRFLRQL 200
P+G ++ R+ PAR+ R L
Sbjct: 265 PTGSRTCCRRRGPARKTARSL 327
>gb|AL505468.1|AL505468 AL505468 Hordeum vulgare Barke roots Hordeum vulgare subsp. vulgare
cDNA clone HW08J03V 5', mRNA sequence
Length = 545
Score = 72.5 bits (152), Expect = 8e-013
Identities = 26/49 (53%), Positives = 36/49 (73%)
Frame = +2 / +2
Query: 5 GSNVQGYFAWSLLDNFEWFAGFTERYGIVYVDRNNNCTRYMKESAKWLK 151
G +V+GYFAWSLLDN+EW AG++ R+G+ +VD N+ RY K S + K
Sbjct: 347 GCDVRGYFAWSLLDNWEWAAGYSSRFGLYFVDYNDKLKRYPKSSVQXFK 493
Score = 34.1 bits (68), Expect = 0.29
Identities = 12/19 (63%), Positives = 14/19 (73%)
Frame = +3 / +3
Query: 15 CKATSLGLCWTTLNGLPAS 71
C ATS GLCWTT +G P +
Sbjct: 357 CAATSRGLCWTTGSGRPGT 413
Score = 34.1 bits (68), Expect = 0.29
Identities = 15/21 (71%), Positives = 16/21 (76%)
Frame = -1 / -3
Query: 66 PANHSKLSSRDQAK*PCTFDP 4
PA HS+LSSRD AK*P T P
Sbjct: 408 PAAHSQLSSRDHAK*PRTSHP 346
Score = 33.1 bits (66), Expect = 0.55
Identities = 12/18 (66%), Positives = 14/18 (77%)
Frame = -3 / -2
Query: 64 GKPFKVVQQRPSEVALHI 11
G+P VVQQRP EVA H+
Sbjct: 406 GRPLPVVQQRPREVAAHV 353
>gb|CA023147.1|CA023147 HZ45F22r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ45F22
5-PRIME, mRNA sequence
Length = 450
Score = 70.3 bits (147), Expect = 4e-012
Identities = 23/39 (58%), Positives = 32/39 (82%)
Frame = +2 / +2
Query: 5 GSNVQGYFAWSLLDNFEWFAGFTERYGIVYVDRNNNCTR 121
G N++GYF WSLLDN+EW +G+T R+G+ Y+D +NN TR
Sbjct: 329 GCNIRGYFVWSLLDNWEWNSGYTVRFGLYYIDYDNNLTR 445
Score = 32.7 bits (65), Expect = 0.76
Identities = 19/38 (50%), Positives = 22/38 (57%)
Frame = -1 / -1
Query: 117 VQLLLRST*TMP*RSVKPANHSKLSSRDQAK*PCTFDP 4
V+LL S * P R+V P HS+LSS D K*P P
Sbjct: 441 VRLLS*SM**RPNRTVYPEFHSQLSSSDHTK*PRMLHP 328
>gb|BE420576.1|BE420576 HWM000.D01 ITEC HWM Barley Leaf Library Hordeum vulgare subsp.
vulgare cDNA clone HWM000.D01, mRNA sequence
Length = 1300
Score = 69.8 bits (146), Expect = 5e-012
Identities = 24/32 (75%), Positives = 29/32 (90%)
Frame = +2 / +2
Query: 5 GSNVQGYFAWSLLDNFEWFAGFTERYGIVYVD 100
G+NV GYFAWSLLDNFEW +G+T ++GIVYVD
Sbjct: 65 GANVVGYFAWSLLDNFEWLSGYTSKFGIVYVD 160
Score = 47.8 bits (98), Expect = 2e-005
Identities = 22/35 (62%), Positives = 26/35 (74%)
Frame = -1 / -2
Query: 108 LLRST*TMP*RSVKPANHSKLSSRDQAK*PCTFDP 4
+++ST TMP V P +HSKLS RDQAK*P TF P
Sbjct: 168 VVKSTYTMPNLEV*PDSHSKLSRRDQAK*PTTFAP 64
>gb|BE420971.1|BE420971 HWM004.D12 ITEC HWM Barley Leaf Library Hordeum vulgare subsp.
vulgare cDNA clone HWM004.D12, mRNA sequence
Length = 1134
Score = 69.8 bits (146), Expect = 5e-012
Identities = 24/35 (68%), Positives = 31/35 (88%)
Frame = +2 / +3
Query: 5 GSNVQGYFAWSLLDNFEWFAGFTERYGIVYVDRNN 109
G+NV GYFAWSLLDNFEW +G++ ++GIVYVD N+
Sbjct: 294 GANVLGYFAWSLLDNFEWMSGYSSKFGIVYVDFNS 398
Score = 42.3 bits (86), Expect = 0.001
Identities = 22/35 (62%), Positives = 23/35 (65%)
Frame = -1 / -3
Query: 108 LLRST*TMP*RSVKPANHSKLSSRDQAK*PCTFDP 4
LL+ST*TMP P HSKLS RD AK*P T P
Sbjct: 397 LLKST*TMPNLDE*PDIHSKLSRRDHAK*PRTLAP 293
Score = 34.1 bits (68), Expect = 0.29
Identities = 15/29 (51%), Positives = 17/29 (58%)
Frame = -2 / -1
Query: 107 CCGRRRQCHNVR*SRQTIQSCPAETKRSS 21
C RRR+C SR + QSC ET RSS
Sbjct: 396 C*SRRRRCRTWTSSRTSTQSCRGETTRSS 310
Score = 29.5 bits (58), Expect = 7.0
Identities = 11/19 (57%), Positives = 15/19 (78%)
Frame = -3 / -2
Query: 67 AGKPFKVVQQRPSEVALHI 11
AG P KVV++RP EVA ++
Sbjct: 356 AGHPLKVVEERPREVAENV 300
Score = 29.5 bits (58), Expect = 7.0
Identities = 17/31 (54%), Positives = 21/31 (67%)
Frame = +1 / +2
Query: 16 ARLLRLVSAGQL*MVCRLHRTLWHCLRRPQQ 108
+RLLR+VS QL*+ RL + H LRR QQ
Sbjct: 305 SRLLRVVSPRQL*VDVRLLVQVRHRLRRLQQ 397
>gb|AL502045.1|AL502045 AL502045 Hordeum vulgare Barke roots Hordeum vulgare subsp. vulgare
cDNA clone HW06E22u 3', mRNA sequence
Length = 393
Score = 69.8 bits (146), Expect = 5e-012
Identities = 24/35 (68%), Positives = 31/35 (88%)
Frame = +2 / -3
Query: 5 GSNVQGYFAWSLLDNFEWFAGFTERYGIVYVDRNN 109
G+NV GYFAWSLLDNFEW +G++ ++GIVYVD N+
Sbjct: 361 GANVLGYFAWSLLDNFEWMSGYSSKFGIVYVDFNS 257
Score = 41.4 bits (84), Expect = 0.002
Identities = 21/35 (60%), Positives = 22/35 (62%)
Frame = -1 / +3
Query: 108 LLRST*TMP*RSVKPANHSKLSSRDQAK*PCTFDP 4
LL+ST TMP P HSKLS RD AK*P T P
Sbjct: 258 LLKSTXTMPNLDEXPDIHSKLSRRDHAK*PRTLAP 362
Score = 29.5 bits (58), Expect = 7.0
Identities = 13/29 (44%), Positives = 15/29 (51%)
Frame = -2 / +1
Query: 107 CCGRRRQCHNVR*SRQTIQSCPAETKRSS 21
C RR +C R + QSC ET RSS
Sbjct: 259 C*SRRXRCRTWTSXRTSTQSCRGETTRSS 345
>gb|BI947342.1|BI947342 HVSMEl0005D04f Hordeum vulgare spike EST library HVcDNA0012
(Fusarium infected) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEl0005D04f, mRNA sequence
Length = 508
Score = 69.8 bits (146), Expect = 5e-012
Identities = 24/35 (68%), Positives = 31/35 (88%)
Frame = +2 / +1
Query: 5 GSNVQGYFAWSLLDNFEWFAGFTERYGIVYVDRNN 109
G+NV GYFAWSLLDNFEW +G++ ++GIVYVD N+
Sbjct: 370 GANVLGYFAWSLLDNFEWMSGYSSKFGIVYVDFNS 474
Score = 42.3 bits (86), Expect = 0.001
Identities = 22/35 (62%), Positives = 23/35 (65%)
Frame = -1 / -3
Query: 108 LLRST*TMP*RSVKPANHSKLSSRDQAK*PCTFDP 4
LL+ST*TMP P HSKLS RD AK*P T P
Sbjct: 473 LLKST*TMPNLDE*PDIHSKLSRRDHAK*PRTLAP 369
Score = 34.1 bits (68), Expect = 0.29
Identities = 15/29 (51%), Positives = 17/29 (58%)
Frame = -2 / -1
Query: 107 CCGRRRQCHNVR*SRQTIQSCPAETKRSS 21
C RRR+C SR + QSC ET RSS
Sbjct: 472 C*SRRRRCRTWTSSRTSTQSCRGETTRSS 386
Score = 29.5 bits (58), Expect = 7.0
Identities = 17/31 (54%), Positives = 21/31 (67%)
Frame = +1 / +3
Query: 16 ARLLRLVSAGQL*MVCRLHRTLWHCLRRPQQ 108
+RLLR+VS QL*+ RL + H LRR QQ
Sbjct: 381 SRLLRVVSPRQL*VDVRLLVQVRHRLRRLQQ 473
Score = 29.5 bits (58), Expect = 7.0
Identities = 11/19 (57%), Positives = 15/19 (78%)
Frame = -3 / -2
Query: 67 AGKPFKVVQQRPSEVALHI 11
AG P KVV++RP EVA ++
Sbjct: 432 AGHPLKVVEERPREVAENV 376
>gb|AV913933.1|AV913933 AV913933 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags23m22 5', mRNA sequence
Length = 573
Score = 69.8 bits (146), Expect = 5e-012
Identities = 24/35 (68%), Positives = 31/35 (88%)
Frame = +2 / +3
Query: 5 GSNVQGYFAWSLLDNFEWFAGFTERYGIVYVDRNN 109
G+NV GYFAWSLLDNFEW +G++ ++GIVYVD N+
Sbjct: 228 GANVLGYFAWSLLDNFEWMSGYSSKFGIVYVDFNS 332
Score = 42.3 bits (86), Expect = 0.001
Identities = 22/35 (62%), Positives = 23/35 (65%)
Frame = -1 / -3
Query: 108 LLRST*TMP*RSVKPANHSKLSSRDQAK*PCTFDP 4
LL+ST*TMP P HSKLS RD AK*P T P
Sbjct: 331 LLKST*TMPNLDE*PDIHSKLSRRDHAK*PRTLAP 227
Score = 34.1 bits (68), Expect = 0.29
Identities = 15/29 (51%), Positives = 17/29 (58%)
Frame = -2 / -1
Query: 107 CCGRRRQCHNVR*SRQTIQSCPAETKRSS 21
C RRR+C SR + QSC ET RSS
Sbjct: 330 C*SRRRRCRTWTSSRTSTQSCRGETTRSS 244
Score = 29.5 bits (58), Expect = 7.0
Identities = 11/19 (57%), Positives = 15/19 (78%)
Frame = -3 / -2
Query: 67 AGKPFKVVQQRPSEVALHI 11
AG P KVV++RP EVA ++
Sbjct: 290 AGHPLKVVEERPREVAENV 234
Score = 29.5 bits (58), Expect = 7.0
Identities = 17/31 (54%), Positives = 21/31 (67%)
Frame = +1 / +2
Query: 16 ARLLRLVSAGQL*MVCRLHRTLWHCLRRPQQ 108
+RLLR+VS QL*+ RL + H LRR QQ
Sbjct: 239 SRLLRVVSPRQL*VDVRLLVQVRHRLRRLQQ 331
>gb|AV917579.1|AV917579 AV917579 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags10i17 3', mRNA sequence
Length = 688
Score = 69.8 bits (146), Expect = 5e-012
Identities = 24/35 (68%), Positives = 31/35 (88%)
Frame = +2 / -3
Query: 5 GSNVQGYFAWSLLDNFEWFAGFTERYGIVYVDRNN 109
G+NV GYFAWSLLDNFEW +G++ ++GIVYVD N+
Sbjct: 326 GANVLGYFAWSLLDNFEWMSGYSSKFGIVYVDFNS 222
Score = 42.3 bits (86), Expect = 0.001
Identities = 22/35 (62%), Positives = 23/35 (65%)
Frame = -1 / +1
Query: 108 LLRST*TMP*RSVKPANHSKLSSRDQAK*PCTFDP 4
LL+ST*TMP P HSKLS RD AK*P T P
Sbjct: 223 LLKST*TMPNLDE*PDIHSKLSRRDHAK*PRTLAP 327
Score = 34.1 bits (68), Expect = 0.29
Identities = 15/29 (51%), Positives = 17/29 (58%)
Frame = -2 / +2
Query: 107 CCGRRRQCHNVR*SRQTIQSCPAETKRSS 21
C RRR+C SR + QSC ET RSS
Sbjct: 224 C*SRRRRCRTWTSSRTSTQSCRGETTRSS 310
Score = 29.5 bits (58), Expect = 7.0
Identities = 17/31 (54%), Positives = 21/31 (67%)
Frame = +1 / -2
Query: 16 ARLLRLVSAGQL*MVCRLHRTLWHCLRRPQQ 108
+RLLR+VS QL*+ RL + H LRR QQ
Sbjct: 315 SRLLRVVSPRQL*VDVRLLVQVRHRLRRLQQ 223
Score = 29.5 bits (58), Expect = 7.0
Identities = 11/19 (57%), Positives = 15/19 (78%)
Frame = -3 / +3
Query: 67 AGKPFKVVQQRPSEVALHI 11
AG P KVV++RP EVA ++
Sbjct: 264 AGHPLKVVEERPREVAENV 320
>gb|AV917900.1|AV917900 AV917900 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags17a02 3', mRNA sequence
Length = 691
Score = 69.8 bits (146), Expect = 5e-012
Identities = 24/35 (68%), Positives = 31/35 (88%)
Frame = +2 / -1
Query: 5 GSNVQGYFAWSLLDNFEWFAGFTERYGIVYVDRNN 109
G+NV GYFAWSLLDNFEW +G++ ++GIVYVD N+
Sbjct: 295 GANVLGYFAWSLLDNFEWMSGYSSKFGIVYVDFNS 191
Score = 42.3 bits (86), Expect = 0.001
Identities = 22/35 (62%), Positives = 23/35 (65%)
Frame = -1 / +3
Query: 108 LLRST*TMP*RSVKPANHSKLSSRDQAK*PCTFDP 4
LL+ST*TMP P HSKLS RD AK*P T P
Sbjct: 192 LLKST*TMPNLDE*PDIHSKLSRRDHAK*PRTLAP 296
Score = 34.1 bits (68), Expect = 0.29
Identities = 15/29 (51%), Positives = 17/29 (58%)
Frame = -2 / +1
Query: 107 CCGRRRQCHNVR*SRQTIQSCPAETKRSS 21
C RRR+C SR + QSC ET RSS
Sbjct: 193 C*SRRRRCRTWTSSRTSTQSCRGETTRSS 279
Score = 29.5 bits (58), Expect = 7.0
Identities = 17/31 (54%), Positives = 21/31 (67%)
Frame = +1 / -3
Query: 16 ARLLRLVSAGQL*MVCRLHRTLWHCLRRPQQ 108
+RLLR+VS QL*+ RL + H LRR QQ
Sbjct: 284 SRLLRVVSPRQL*VDVRLLVQVRHRLRRLQQ 192
Score = 29.5 bits (58), Expect = 7.0
Identities = 11/19 (57%), Positives = 15/19 (78%)
Frame = -3 / +2
Query: 67 AGKPFKVVQQRPSEVALHI 11
AG P KVV++RP EVA ++
Sbjct: 233 AGHPLKVVEERPREVAENV 289
>gb|AV918128.1|AV918128 AV918128 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags17p13 3', mRNA sequence
Length = 684
Score = 69.8 bits (146), Expect = 5e-012
Identities = 24/35 (68%), Positives = 31/35 (88%)
Frame = +2 / -1
Query: 5 GSNVQGYFAWSLLDNFEWFAGFTERYGIVYVDRNN 109
G+NV GYFAWSLLDNFEW +G++ ++GIVYVD N+
Sbjct: 321 GANVLGYFAWSLLDNFEWMSGYSSKFGIVYVDFNS 217
Score = 42.3 bits (86), Expect = 0.001
Identities = 22/35 (62%), Positives = 23/35 (65%)
Frame = -1 / +2
Query: 108 LLRST*TMP*RSVKPANHSKLSSRDQAK*PCTFDP 4
LL+ST*TMP P HSKLS RD AK*P T P
Sbjct: 218 LLKST*TMPNLDE*PDIHSKLSRRDHAK*PRTLAP 322
Score = 34.1 bits (68), Expect = 0.29
Identities = 15/29 (51%), Positives = 17/29 (58%)
Frame = -2 / +3
Query: 107 CCGRRRQCHNVR*SRQTIQSCPAETKRSS 21
C RRR+C SR + QSC ET RSS
Sbjct: 219 C*SRRRRCRTWTSSRTSTQSCRGETTRSS 305
Score = 29.5 bits (58), Expect = 7.0
Identities = 17/31 (54%), Positives = 21/31 (67%)
Frame = +1 / -3
Query: 16 ARLLRLVSAGQL*MVCRLHRTLWHCLRRPQQ 108
+RLLR+VS QL*+ RL + H LRR QQ
Sbjct: 310 SRLLRVVSPRQL*VDVRLLVQVRHRLRRLQQ 218
Score = 29.5 bits (58), Expect = 7.0
Identities = 11/19 (57%), Positives = 15/19 (78%)
Frame = -3 / +1
Query: 67 AGKPFKVVQQRPSEVALHI 11
AG P KVV++RP EVA ++
Sbjct: 259 AGHPLKVVEERPREVAENV 315
>gb|AV918243.1|AV918243 AV918243 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags20f24 3', mRNA sequence
Length = 629
Score = 69.8 bits (146), Expect = 5e-012
Identities = 24/35 (68%), Positives = 31/35 (88%)
Frame = +2 / -3
Query: 5 GSNVQGYFAWSLLDNFEWFAGFTERYGIVYVDRNN 109
G+NV GYFAWSLLDNFEW +G++ ++GIVYVD N+
Sbjct: 315 GANVLGYFAWSLLDNFEWMSGYSSKFGIVYVDFNS 211
Score = 42.3 bits (86), Expect = 0.001
Identities = 22/35 (62%), Positives = 23/35 (65%)
Frame = -1 / +2
Query: 108 LLRST*TMP*RSVKPANHSKLSSRDQAK*PCTFDP 4
LL+ST*TMP P HSKLS RD AK*P T P
Sbjct: 212 LLKST*TMPNLDE*PDIHSKLSRRDHAK*PRTLAP 316
Score = 34.1 bits (68), Expect = 0.29
Identities = 15/29 (51%), Positives = 17/29 (58%)
Frame = -2 / +3
Query: 107 CCGRRRQCHNVR*SRQTIQSCPAETKRSS 21
C RRR+C SR + QSC ET RSS
Sbjct: 213 C*SRRRRCRTWTSSRTSTQSCRGETTRSS 299
Score = 29.5 bits (58), Expect = 7.0
Identities = 17/31 (54%), Positives = 21/31 (67%)
Frame = +1 / -2
Query: 16 ARLLRLVSAGQL*MVCRLHRTLWHCLRRPQQ 108
+RLLR+VS QL*+ RL + H LRR QQ
Sbjct: 304 SRLLRVVSPRQL*VDVRLLVQVRHRLRRLQQ 212
Score = 29.5 bits (58), Expect = 7.0
Identities = 11/19 (57%), Positives = 15/19 (78%)
Frame = -3 / +1
Query: 67 AGKPFKVVQQRPSEVALHI 11
AG P KVV++RP EVA ++
Sbjct: 253 AGHPLKVVEERPREVAENV 309
>gb|AV918260.1|AV918260 AV918260 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags20h02 3', mRNA sequence
Length = 629
Score = 69.8 bits (146), Expect = 5e-012
Identities = 24/35 (68%), Positives = 31/35 (88%)
Frame = +2 / -3
Query: 5 GSNVQGYFAWSLLDNFEWFAGFTERYGIVYVDRNN 109
G+NV GYFAWSLLDNFEW +G++ ++GIVYVD N+
Sbjct: 321 GANVLGYFAWSLLDNFEWMSGYSSKFGIVYVDFNS 217
Score = 42.3 bits (86), Expect = 0.001
Identities = 22/35 (62%), Positives = 23/35 (65%)
Frame = -1 / +2
Query: 108 LLRST*TMP*RSVKPANHSKLSSRDQAK*PCTFDP 4
LL+ST*TMP P HSKLS RD AK*P T P
Sbjct: 218 LLKST*TMPNLDE*PDIHSKLSRRDHAK*PRTLAP 322
Score = 34.1 bits (68), Expect = 0.29
Identities = 15/29 (51%), Positives = 17/29 (58%)
Frame = -2 / +3
Query: 107 CCGRRRQCHNVR*SRQTIQSCPAETKRSS 21
C RRR+C SR + QSC ET RSS
Sbjct: 219 C*SRRRRCRTWTSSRTSTQSCRGETTRSS 305
Score = 29.5 bits (58), Expect = 7.0
Identities = 17/31 (54%), Positives = 21/31 (67%)
Frame = +1 / -2
Query: 16 ARLLRLVSAGQL*MVCRLHRTLWHCLRRPQQ 108
+RLLR+VS QL*+ RL + H LRR QQ
Sbjct: 310 SRLLRVVSPRQL*VDVRLLVQVRHRLRRLQQ 218
Score = 29.5 bits (58), Expect = 7.0
Identities = 11/19 (57%), Positives = 15/19 (78%)
Frame = -3 / +1
Query: 67 AGKPFKVVQQRPSEVALHI 11
AG P KVV++RP EVA ++
Sbjct: 259 AGHPLKVVEERPREVAENV 315
>gb|AV918262.1|AV918262 AV918262 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags20h04 3', mRNA sequence
Length = 673
Score = 69.8 bits (146), Expect = 5e-012
Identities = 24/35 (68%), Positives = 31/35 (88%)
Frame = +2 / -1
Query: 5 GSNVQGYFAWSLLDNFEWFAGFTERYGIVYVDRNN 109
G+NV GYFAWSLLDNFEW +G++ ++GIVYVD N+
Sbjct: 307 GANVLGYFAWSLLDNFEWMSGYSSKFGIVYVDFNS 203
Score = 42.3 bits (86), Expect = 0.001
Identities = 22/35 (62%), Positives = 23/35 (65%)
Frame = -1 / +3
Query: 108 LLRST*TMP*RSVKPANHSKLSSRDQAK*PCTFDP 4
LL+ST*TMP P HSKLS RD AK*P T P
Sbjct: 204 LLKST*TMPNLDE*PDIHSKLSRRDHAK*PRTLAP 308
Score = 34.1 bits (68), Expect = 0.29
Identities = 15/29 (51%), Positives = 17/29 (58%)
Frame = -2 / +1
Query: 107 CCGRRRQCHNVR*SRQTIQSCPAETKRSS 21
C RRR+C SR + QSC ET RSS
Sbjct: 205 C*SRRRRCRTWTSSRTSTQSCRGETTRSS 291
Score = 29.5 bits (58), Expect = 7.0
Identities = 17/31 (54%), Positives = 21/31 (67%)
Frame = +1 / -3
Query: 16 ARLLRLVSAGQL*MVCRLHRTLWHCLRRPQQ 108
+RLLR+VS QL*+ RL + H LRR QQ
Sbjct: 296 SRLLRVVSPRQL*VDVRLLVQVRHRLRRLQQ 204
Score = 29.5 bits (58), Expect = 7.0
Identities = 11/19 (57%), Positives = 15/19 (78%)
Frame = -3 / +2
Query: 67 AGKPFKVVQQRPSEVALHI 11
AG P KVV++RP EVA ++
Sbjct: 245 AGHPLKVVEERPREVAENV 301
>gb|AV918859.1|AV918859 AV918859 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags22i02 3', mRNA sequence
Length = 510
Score = 69.8 bits (146), Expect = 5e-012
Identities = 24/35 (68%), Positives = 31/35 (88%)
Frame = +2 / -1
Query: 5 GSNVQGYFAWSLLDNFEWFAGFTERYGIVYVDRNN 109
G+NV GYFAWSLLDNFEW +G++ ++GIVYVD N+
Sbjct: 321 GANVLGYFAWSLLDNFEWMSGYSSKFGIVYVDFNS 217
Score = 42.3 bits (86), Expect = 0.001
Identities = 22/35 (62%), Positives = 23/35 (65%)
Frame = -1 / +2
Query: 108 LLRST*TMP*RSVKPANHSKLSSRDQAK*PCTFDP 4
LL+ST*TMP P HSKLS RD AK*P T P
Sbjct: 218 LLKST*TMPNLDE*PDIHSKLSRRDHAK*PRTLAP 322
Score = 34.1 bits (68), Expect = 0.29
Identities = 15/29 (51%), Positives = 17/29 (58%)
Frame = -2 / +3
Query: 107 CCGRRRQCHNVR*SRQTIQSCPAETKRSS 21
C RRR+C SR + QSC ET RSS
Sbjct: 219 C*SRRRRCRTWTSSRTSTQSCRGETTRSS 305
Score = 29.5 bits (58), Expect = 7.0
Identities = 11/19 (57%), Positives = 15/19 (78%)
Frame = -3 / +1
Query: 67 AGKPFKVVQQRPSEVALHI 11
AG P KVV++RP EVA ++
Sbjct: 259 AGHPLKVVEERPREVAENV 315
Score = 29.5 bits (58), Expect = 7.0
Identities = 17/31 (54%), Positives = 21/31 (67%)
Frame = +1 / -3
Query: 16 ARLLRLVSAGQL*MVCRLHRTLWHCLRRPQQ 108
+RLLR+VS QL*+ RL + H LRR QQ
Sbjct: 310 SRLLRVVSPRQL*VDVRLLVQVRHRLRRLQQ 218
>gb|AV919042.1|AV919042 AV919042 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags4d02 3', mRNA sequence
Length = 621
Score = 69.8 bits (146), Expect = 5e-012
Identities = 24/35 (68%), Positives = 31/35 (88%)
Frame = +2 / -3
Query: 5 GSNVQGYFAWSLLDNFEWFAGFTERYGIVYVDRNN 109
G+NV GYFAWSLLDNFEW +G++ ++GIVYVD N+
Sbjct: 313 GANVLGYFAWSLLDNFEWMSGYSSKFGIVYVDFNS 209
Score = 42.3 bits (86), Expect = 0.001
Identities = 22/35 (62%), Positives = 23/35 (65%)
Frame = -1 / +3
Query: 108 LLRST*TMP*RSVKPANHSKLSSRDQAK*PCTFDP 4
LL+ST*TMP P HSKLS RD AK*P T P
Sbjct: 210 LLKST*TMPNLDE*PDIHSKLSRRDHAK*PRTLAP 314
Score = 34.1 bits (68), Expect = 0.29
Identities = 15/29 (51%), Positives = 17/29 (58%)
Frame = -2 / +1
Query: 107 CCGRRRQCHNVR*SRQTIQSCPAETKRSS 21
C RRR+C SR + QSC ET RSS
Sbjct: 211 C*SRRRRCRTWTSSRTSTQSCRGETTRSS 297
Score = 29.5 bits (58), Expect = 7.0
Identities = 17/31 (54%), Positives = 21/31 (67%)
Frame = +1 / -2
Query: 16 ARLLRLVSAGQL*MVCRLHRTLWHCLRRPQQ 108
+RLLR+VS QL*+ RL + H LRR QQ
Sbjct: 302 SRLLRVVSPRQL*VDVRLLVQVRHRLRRLQQ 210
Score = 29.5 bits (58), Expect = 7.0
Identities = 11/19 (57%), Positives = 15/19 (78%)
Frame = -3 / +2
Query: 67 AGKPFKVVQQRPSEVALHI 11
AG P KVV++RP EVA ++
Sbjct: 251 AGHPLKVVEERPREVAENV 307
>gb|AV919161.1|AV919161 AV919161 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags4m17 3', mRNA sequence
Length = 714
Score = 69.8 bits (146), Expect = 5e-012
Identities = 24/35 (68%), Positives = 31/35 (88%)
Frame = +2 / -3
Query: 5 GSNVQGYFAWSLLDNFEWFAGFTERYGIVYVDRNN 109
G+NV GYFAWSLLDNFEW +G++ ++GIVYVD N+
Sbjct: 316 GANVLGYFAWSLLDNFEWMSGYSSKFGIVYVDFNS 212
Score = 42.3 bits (86), Expect = 0.001
Identities = 22/35 (62%), Positives = 23/35 (65%)
Frame = -1 / +3
Query: 108 LLRST*TMP*RSVKPANHSKLSSRDQAK*PCTFDP 4
LL+ST*TMP P HSKLS RD AK*P T P
Sbjct: 213 LLKST*TMPNLDE*PDIHSKLSRRDHAK*PRTLAP 317
Score = 34.1 bits (68), Expect = 0.29
Identities = 15/29 (51%), Positives = 17/29 (58%)
Frame = -2 / +1
Query: 107 CCGRRRQCHNVR*SRQTIQSCPAETKRSS 21
C RRR+C SR + QSC ET RSS
Sbjct: 214 C*SRRRRCRTWTSSRTSTQSCRGETTRSS 300
Score = 29.5 bits (58), Expect = 7.0
Identities = 17/31 (54%), Positives = 21/31 (67%)
Frame = +1 / -2
Query: 16 ARLLRLVSAGQL*MVCRLHRTLWHCLRRPQQ 108
+RLLR+VS QL*+ RL + H LRR QQ
Sbjct: 305 SRLLRVVSPRQL*VDVRLLVQVRHRLRRLQQ 213
Score = 29.5 bits (58), Expect = 7.0
Identities = 11/19 (57%), Positives = 15/19 (78%)
Frame = -3 / +2
Query: 67 AGKPFKVVQQRPSEVALHI 11
AG P KVV++RP EVA ++
Sbjct: 254 AGHPLKVVEERPREVAENV 310
>gb|AV920604.1|AV920604 AV920604 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags14n06 3', mRNA sequence
Length = 670
Score = 69.8 bits (146), Expect = 5e-012
Identities = 24/35 (68%), Positives = 31/35 (88%)
Frame = +2 / -2
Query: 5 GSNVQGYFAWSLLDNFEWFAGFTERYGIVYVDRNN 109
G+NV GYFAWSLLDNFEW +G++ ++GIVYVD N+
Sbjct: 294 GANVLGYFAWSLLDNFEWMSGYSSKFGIVYVDFNS 190
Score = 42.3 bits (86), Expect = 0.001
Identities = 22/35 (62%), Positives = 23/35 (65%)
Frame = -1 / +2
Query: 108 LLRST*TMP*RSVKPANHSKLSSRDQAK*PCTFDP 4
LL+ST*TMP P HSKLS RD AK*P T P
Sbjct: 191 LLKST*TMPNLDE*PDIHSKLSRRDHAK*PRTLAP 295
Score = 34.1 bits (68), Expect = 0.29
Identities = 15/29 (51%), Positives = 17/29 (58%)
Frame = -2 / +3
Query: 107 CCGRRRQCHNVR*SRQTIQSCPAETKRSS 21
C RRR+C SR + QSC ET RSS
Sbjct: 192 C*SRRRRCRTWTSSRTSTQSCRGETTRSS 278
Score = 29.5 bits (58), Expect = 7.0
Identities = 17/31 (54%), Positives = 21/31 (67%)
Frame = +1 / -1
Query: 16 ARLLRLVSAGQL*MVCRLHRTLWHCLRRPQQ 108
+RLLR+VS QL*+ RL + H LRR QQ
Sbjct: 283 SRLLRVVSPRQL*VDVRLLVQVRHRLRRLQQ 191
Score = 29.5 bits (58), Expect = 7.0
Identities = 11/19 (57%), Positives = 15/19 (78%)
Frame = -3 / +1
Query: 67 AGKPFKVVQQRPSEVALHI 11
AG P KVV++RP EVA ++
Sbjct: 232 AGHPLKVVEERPREVAENV 288
>gb|AV921410.1|AV921410 AV921410 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags23f10 3', mRNA sequence
Length = 586
Score = 69.8 bits (146), Expect = 5e-012
Identities = 24/35 (68%), Positives = 31/35 (88%)
Frame = +2 / -1
Query: 5 GSNVQGYFAWSLLDNFEWFAGFTERYGIVYVDRNN 109
G+NV GYFAWSLLDNFEW +G++ ++GIVYVD N+
Sbjct: 316 GANVLGYFAWSLLDNFEWMSGYSSKFGIVYVDFNS 212
Score = 42.3 bits (86), Expect = 0.001
Identities = 22/35 (62%), Positives = 23/35 (65%)
Frame = -1 / +3
Query: 108 LLRST*TMP*RSVKPANHSKLSSRDQAK*PCTFDP 4
LL+ST*TMP P HSKLS RD AK*P T P
Sbjct: 213 LLKST*TMPNLDE*PDIHSKLSRRDHAK*PRTLAP 317
Score = 34.1 bits (68), Expect = 0.29
Identities = 15/29 (51%), Positives = 17/29 (58%)
Frame = -2 / +1
Query: 107 CCGRRRQCHNVR*SRQTIQSCPAETKRSS 21
C RRR+C SR + QSC ET RSS
Sbjct: 214 C*SRRRRCRTWTSSRTSTQSCRGETTRSS 300
Score = 29.5 bits (58), Expect = 7.0
Identities = 17/31 (54%), Positives = 21/31 (67%)
Frame = +1 / -3
Query: 16 ARLLRLVSAGQL*MVCRLHRTLWHCLRRPQQ 108
+RLLR+VS QL*+ RL + H LRR QQ
Sbjct: 305 SRLLRVVSPRQL*VDVRLLVQVRHRLRRLQQ 213
Score = 29.5 bits (58), Expect = 7.0
Identities = 11/19 (57%), Positives = 15/19 (78%)
Frame = -3 / +2
Query: 67 AGKPFKVVQQRPSEVALHI 11
AG P KVV++RP EVA ++
Sbjct: 254 AGHPLKVVEERPREVAENV 310
>gb|AV921547.1|AV921547 AV921547 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags23m22 3', mRNA sequence
Length = 537
Score = 69.8 bits (146), Expect = 5e-012
Identities = 24/35 (68%), Positives = 31/35 (88%)
Frame = +2 / -3
Query: 5 GSNVQGYFAWSLLDNFEWFAGFTERYGIVYVDRNN 109
G+NV GYFAWSLLDNFEW +G++ ++GIVYVD N+
Sbjct: 322 GANVLGYFAWSLLDNFEWMSGYSSKFGIVYVDFNS 218
Score = 42.3 bits (86), Expect = 0.001
Identities = 22/35 (62%), Positives = 23/35 (65%)
Frame = -1 / +3
Query: 108 LLRST*TMP*RSVKPANHSKLSSRDQAK*PCTFDP 4
LL+ST*TMP P HSKLS RD AK*P T P
Sbjct: 219 LLKST*TMPNLDE*PDIHSKLSRRDHAK*PRTLAP 323
Score = 34.1 bits (68), Expect = 0.29
Identities = 15/29 (51%), Positives = 17/29 (58%)
Frame = -2 / +1
Query: 107 CCGRRRQCHNVR*SRQTIQSCPAETKRSS 21
C RRR+C SR + QSC ET RSS
Sbjct: 220 C*SRRRRCRTWTSSRTSTQSCRGETTRSS 306
Score = 29.5 bits (58), Expect = 7.0
Identities = 11/19 (57%), Positives = 15/19 (78%)
Frame = -3 / +2
Query: 67 AGKPFKVVQQRPSEVALHI 11
AG P KVV++RP EVA ++
Sbjct: 260 AGHPLKVVEERPREVAENV 316
Score = 29.5 bits (58), Expect = 7.0
Identities = 17/31 (54%), Positives = 21/31 (67%)
Frame = +1 / -2
Query: 16 ARLLRLVSAGQL*MVCRLHRTLWHCLRRPQQ 108
+RLLR+VS QL*+ RL + H LRR QQ
Sbjct: 311 SRLLRVVSPRQL*VDVRLLVQVRHRLRRLQQ 219
>gb|AV921892.1|AV921892 AV921892 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags19a05 3', mRNA sequence
Length = 503
Score = 69.8 bits (146), Expect = 5e-012
Identities = 24/35 (68%), Positives = 31/35 (88%)
Frame = +2 / -2
Query: 5 GSNVQGYFAWSLLDNFEWFAGFTERYGIVYVDRNN 109
G+NV GYFAWSLLDNFEW +G++ ++GIVYVD N+
Sbjct: 316 GANVLGYFAWSLLDNFEWMSGYSSKFGIVYVDFNS 212
Score = 42.3 bits (86), Expect = 0.001
Identities = 22/35 (62%), Positives = 23/35 (65%)
Frame = -1 / +3
Query: 108 LLRST*TMP*RSVKPANHSKLSSRDQAK*PCTFDP 4
LL+ST*TMP P HSKLS RD AK*P T P
Sbjct: 213 LLKST*TMPNLDE*PDIHSKLSRRDHAK*PRTLAP 317
Score = 34.1 bits (68), Expect = 0.29
Identities = 15/29 (51%), Positives = 17/29 (58%)
Frame = -2 / +1
Query: 107 CCGRRRQCHNVR*SRQTIQSCPAETKRSS 21
C RRR+C SR + QSC ET RSS
Sbjct: 214 C*SRRRRCRTWTSSRTSTQSCRGETTRSS 300
Score = 29.5 bits (58), Expect = 7.0
Identities = 11/19 (57%), Positives = 15/19 (78%)
Frame = -3 / +2
Query: 67 AGKPFKVVQQRPSEVALHI 11
AG P KVV++RP EVA ++
Sbjct: 254 AGHPLKVVEERPREVAENV 310
Score = 29.5 bits (58), Expect = 7.0
Identities = 17/31 (54%), Positives = 21/31 (67%)
Frame = +1 / -1
Query: 16 ARLLRLVSAGQL*MVCRLHRTLWHCLRRPQQ 108
+RLLR+VS QL*+ RL + H LRR QQ
Sbjct: 305 SRLLRVVSPRQL*VDVRLLVQVRHRLRRLQQ 213
>gb|BM444609.1|BM444609 EBem09_SQ005_O07_R embryo, 1 Day germination, no treatment, cv
Optic, EBem09 Hordeum vulgare subsp. vulgare cDNA clone
EBem09_SQ005_O07 5', mRNA sequence
Length = 447
Score = 69.8 bits (146), Expect = 5e-012
Identities = 24/35 (68%), Positives = 31/35 (88%)
Frame = +2 / +3
Query: 5 GSNVQGYFAWSLLDNFEWFAGFTERYGIVYVDRNN 109
G+NV GYFAWSLLDNFEW +G++ ++GIVYVD N+
Sbjct: 216 GANVLGYFAWSLLDNFEWMSGYSSKFGIVYVDFNS 320
Score = 42.3 bits (86), Expect = 0.001
Identities = 22/35 (62%), Positives = 23/35 (65%)
Frame = -1 / -3
Query: 108 LLRST*TMP*RSVKPANHSKLSSRDQAK*PCTFDP 4
LL+ST*TMP P HSKLS RD AK*P T P
Sbjct: 319 LLKST*TMPNLDE*PDIHSKLSRRDHAK*PRTLAP 215
Score = 34.1 bits (68), Expect = 0.29
Identities = 15/29 (51%), Positives = 17/29 (58%)
Frame = -2 / -1
Query: 107 CCGRRRQCHNVR*SRQTIQSCPAETKRSS 21
C RRR+C SR + QSC ET RSS
Sbjct: 318 C*SRRRRCRTWTSSRTSTQSCRGETTRSS 232
Score = 29.5 bits (58), Expect = 7.0
Identities = 17/31 (54%), Positives = 21/31 (67%)
Frame = +1 / +2
Query: 16 ARLLRLVSAGQL*MVCRLHRTLWHCLRRPQQ 108
+RLLR+VS QL*+ RL + H LRR QQ
Sbjct: 227 SRLLRVVSPRQL*VDVRLLVQVRHRLRRLQQ 319
Score = 29.5 bits (58), Expect = 7.0
Identities = 11/19 (57%), Positives = 15/19 (78%)
Frame = -3 / -2
Query: 67 AGKPFKVVQQRPSEVALHI 11
AG P KVV++RP EVA ++
Sbjct: 278 AGHPLKVVEERPREVAENV 222
>gb|BM444610.1|BM444610 EBem09_SQ005_O09_R embryo, 1 Day germination, no treatment, cv
Optic, EBem09 Hordeum vulgare subsp. vulgare cDNA clone
EBem09_SQ005_O09 5', mRNA sequence
Length = 455
Score = 69.8 bits (146), Expect = 5e-012
Identities = 24/35 (68%), Positives = 31/35 (88%)
Frame = +2 / +3
Query: 5 GSNVQGYFAWSLLDNFEWFAGFTERYGIVYVDRNN 109
G+NV GYFAWSLLDNFEW +G++ ++GIVYVD N+
Sbjct: 219 GANVLGYFAWSLLDNFEWMSGYSSKFGIVYVDFNS 323
Score = 42.3 bits (86), Expect = 0.001
Identities = 22/35 (62%), Positives = 23/35 (65%)
Frame = -1 / -2
Query: 108 LLRST*TMP*RSVKPANHSKLSSRDQAK*PCTFDP 4
LL+ST*TMP P HSKLS RD AK*P T P
Sbjct: 322 LLKST*TMPNLDE*PDIHSKLSRRDHAK*PRTLAP 218
Score = 34.1 bits (68), Expect = 0.29
Identities = 15/29 (51%), Positives = 17/29 (58%)
Frame = -2 / -3
Query: 107 CCGRRRQCHNVR*SRQTIQSCPAETKRSS 21
C RRR+C SR + QSC ET RSS
Sbjct: 321 C*SRRRRCRTWTSSRTSTQSCRGETTRSS 235
Score = 29.5 bits (58), Expect = 7.0
Identities = 17/31 (54%), Positives = 21/31 (67%)
Frame = +1 / +2
Query: 16 ARLLRLVSAGQL*MVCRLHRTLWHCLRRPQQ 108
+RLLR+VS QL*+ RL + H LRR QQ
Sbjct: 230 SRLLRVVSPRQL*VDVRLLVQVRHRLRRLQQ 322
Score = 29.5 bits (58), Expect = 7.0
Identities = 11/19 (57%), Positives = 15/19 (78%)
Frame = -3 / -1
Query: 67 AGKPFKVVQQRPSEVALHI 11
AG P KVV++RP EVA ++
Sbjct: 281 AGHPLKVVEERPREVAENV 225
>gb|AJ433290.1|AJ433290 AJ433290 S00002 Hordeum vulgare subsp. vulgare cDNA clone
S0000200085B05F1, mRNA sequence
Length = 343
Score = 69.8 bits (146), Expect = 5e-012
Identities = 24/35 (68%), Positives = 31/35 (88%)
Frame = +2 / +1
Query: 5 GSNVQGYFAWSLLDNFEWFAGFTERYGIVYVDRNN 109
G+NV GYFAWSLLDNFEW +G++ ++GIVYVD N+
Sbjct: 136 GANVLGYFAWSLLDNFEWMSGYSSKFGIVYVDFNS 240
Score = 42.3 bits (86), Expect = 0.001
Identities = 22/35 (62%), Positives = 23/35 (65%)
Frame = -1 / -3
Query: 108 LLRST*TMP*RSVKPANHSKLSSRDQAK*PCTFDP 4
LL+ST*TMP P HSKLS RD AK*P T P
Sbjct: 239 LLKST*TMPNLDE*PDIHSKLSRRDHAK*PRTLAP 135
Score = 34.1 bits (68), Expect = 0.29
Identities = 15/29 (51%), Positives = 17/29 (58%)
Frame = -2 / -1
Query: 107 CCGRRRQCHNVR*SRQTIQSCPAETKRSS 21
C RRR+C SR + QSC ET RSS
Sbjct: 238 C*SRRRRCRTWTSSRTSTQSCRGETTRSS 152
Score = 29.5 bits (58), Expect = 7.0
Identities = 17/31 (54%), Positives = 21/31 (67%)
Frame = +1 / +3
Query: 16 ARLLRLVSAGQL*MVCRLHRTLWHCLRRPQQ 108
+RLLR+VS QL*+ RL + H LRR QQ
Sbjct: 147 SRLLRVVSPRQL*VDVRLLVQVRHRLRRLQQ 239
Score = 29.5 bits (58), Expect = 7.0
Identities = 11/19 (57%), Positives = 15/19 (78%)
Frame = -3 / -2
Query: 67 AGKPFKVVQQRPSEVALHI 11
AG P KVV++RP EVA ++
Sbjct: 198 AGHPLKVVEERPREVAENV 142
>gb|BJ462494.1|BJ462494 BJ462494 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags28l23 5', mRNA sequence
Length = 610
Score = 69.8 bits (146), Expect = 5e-012
Identities = 24/32 (75%), Positives = 29/32 (90%)
Frame = +2 / +1
Query: 5 GSNVQGYFAWSLLDNFEWFAGFTERYGIVYVD 100
G+NV GYFAWSLLDNFEW +G+T ++GIVYVD
Sbjct: 478 GANVVGYFAWSLLDNFEWLSGYTSKFGIVYVD 573
Score = 47.8 bits (98), Expect = 2e-005
Identities = 22/35 (62%), Positives = 26/35 (74%)
Frame = -1 / -3
Query: 108 LLRST*TMP*RSVKPANHSKLSSRDQAK*PCTFDP 4
+++ST TMP V P +HSKLS RDQAK*P TF P
Sbjct: 581 VVKSTYTMPNLEV*PDSHSKLSRRDQAK*PTTFAP 477
>gb|BJ465763.1|BJ465763 BJ465763 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags27d04 3', mRNA sequence
Length = 632
Score = 69.8 bits (146), Expect = 5e-012
Identities = 24/35 (68%), Positives = 31/35 (88%)
Frame = +2 / -2
Query: 5 GSNVQGYFAWSLLDNFEWFAGFTERYGIVYVDRNN 109
G+NV GYFAWSLLDNFEW +G++ ++GIVYVD N+
Sbjct: 295 GANVLGYFAWSLLDNFEWMSGYSSKFGIVYVDFNS 191
Score = 42.3 bits (86), Expect = 0.001
Identities = 22/35 (62%), Positives = 23/35 (65%)
Frame = -1 / +3
Query: 108 LLRST*TMP*RSVKPANHSKLSSRDQAK*PCTFDP 4
LL+ST*TMP P HSKLS RD AK*P T P
Sbjct: 192 LLKST*TMPNLDE*PDIHSKLSRRDHAK*PRTLAP 296
Score = 34.1 bits (68), Expect = 0.29
Identities = 15/29 (51%), Positives = 17/29 (58%)
Frame = -2 / +1
Query: 107 CCGRRRQCHNVR*SRQTIQSCPAETKRSS 21
C RRR+C SR + QSC ET RSS
Sbjct: 193 C*SRRRRCRTWTSSRTSTQSCRGETTRSS 279
Score = 29.5 bits (58), Expect = 7.0
Identities = 17/31 (54%), Positives = 21/31 (67%)
Frame = +1 / -1
Query: 16 ARLLRLVSAGQL*MVCRLHRTLWHCLRRPQQ 108
+RLLR+VS QL*+ RL + H LRR QQ
Sbjct: 284 SRLLRVVSPRQL*VDVRLLVQVRHRLRRLQQ 192
Score = 29.5 bits (58), Expect = 7.0
Identities = 11/19 (57%), Positives = 15/19 (78%)
Frame = -3 / +2
Query: 67 AGKPFKVVQQRPSEVALHI 11
AG P KVV++RP EVA ++
Sbjct: 233 AGHPLKVVEERPREVAENV 289
>gb|BJ466393.1|BJ466393 BJ466393 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags31o15 3', mRNA sequence
Length = 653
Score = 69.8 bits (146), Expect = 5e-012
Identities = 24/35 (68%), Positives = 31/35 (88%)
Frame = +2 / -1
Query: 5 GSNVQGYFAWSLLDNFEWFAGFTERYGIVYVDRNN 109
G+NV GYFAWSLLDNFEW +G++ ++GIVYVD N+
Sbjct: 290 GANVLGYFAWSLLDNFEWMSGYSSKFGIVYVDFNS 186
Score = 42.3 bits (86), Expect = 0.001
Identities = 22/35 (62%), Positives = 23/35 (65%)
Frame = -1 / +1
Query: 108 LLRST*TMP*RSVKPANHSKLSSRDQAK*PCTFDP 4
LL+ST*TMP P HSKLS RD AK*P T P
Sbjct: 187 LLKST*TMPNLDE*PDIHSKLSRRDHAK*PRTLAP 291
Score = 34.1 bits (68), Expect = 0.29
Identities = 15/29 (51%), Positives = 17/29 (58%)
Frame = -2 / +2
Query: 107 CCGRRRQCHNVR*SRQTIQSCPAETKRSS 21
C RRR+C SR + QSC ET RSS
Sbjct: 188 C*SRRRRCRTWTSSRTSTQSCRGETTRSS 274
Score = 29.5 bits (58), Expect = 7.0
Identities = 17/31 (54%), Positives = 21/31 (67%)
Frame = +1 / -3
Query: 16 ARLLRLVSAGQL*MVCRLHRTLWHCLRRPQQ 108
+RLLR+VS QL*+ RL + H LRR QQ
Sbjct: 279 SRLLRVVSPRQL*VDVRLLVQVRHRLRRLQQ 187
Score = 29.5 bits (58), Expect = 7.0
Identities = 11/19 (57%), Positives = 15/19 (78%)
Frame = -3 / +3
Query: 67 AGKPFKVVQQRPSEVALHI 11
AG P KVV++RP EVA ++
Sbjct: 228 AGHPLKVVEERPREVAENV 284
>gb|BJ467710.1|BJ467710 BJ467710 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags29i09 3', mRNA sequence
Length = 712
Score = 69.8 bits (146), Expect = 5e-012
Identities = 24/35 (68%), Positives = 31/35 (88%)
Frame = +2 / -2
Query: 5 GSNVQGYFAWSLLDNFEWFAGFTERYGIVYVDRNN 109
G+NV GYFAWSLLDNFEW +G++ ++GIVYVD N+
Sbjct: 312 GANVLGYFAWSLLDNFEWMSGYSSKFGIVYVDFNS 208
Score = 42.3 bits (86), Expect = 0.001
Identities = 22/35 (62%), Positives = 23/35 (65%)
Frame = -1 / +2
Query: 108 LLRST*TMP*RSVKPANHSKLSSRDQAK*PCTFDP 4
LL+ST*TMP P HSKLS RD AK*P T P
Sbjct: 209 LLKST*TMPNLDE*PDIHSKLSRRDHAK*PRTLAP 313
Score = 34.1 bits (68), Expect = 0.29
Identities = 15/29 (51%), Positives = 17/29 (58%)
Frame = -2 / +3
Query: 107 CCGRRRQCHNVR*SRQTIQSCPAETKRSS 21
C RRR+C SR + QSC ET RSS
Sbjct: 210 C*SRRRRCRTWTSSRTSTQSCRGETTRSS 296
Score = 29.5 bits (58), Expect = 7.0
Identities = 17/31 (54%), Positives = 21/31 (67%)
Frame = +1 / -1
Query: 16 ARLLRLVSAGQL*MVCRLHRTLWHCLRRPQQ 108
+RLLR+VS QL*+ RL + H LRR QQ
Sbjct: 301 SRLLRVVSPRQL*VDVRLLVQVRHRLRRLQQ 209
Score = 29.5 bits (58), Expect = 7.0
Identities = 11/19 (57%), Positives = 15/19 (78%)
Frame = -3 / +1
Query: 67 AGKPFKVVQQRPSEVALHI 11
AG P KVV++RP EVA ++
Sbjct: 250 AGHPLKVVEERPREVAENV 306
>gb|BJ468274.1|BJ468274 BJ468274 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags37p13 3', mRNA sequence
Length = 523
Score = 69.8 bits (146), Expect = 5e-012
Identities = 24/35 (68%), Positives = 31/35 (88%)
Frame = +2 / -1
Query: 5 GSNVQGYFAWSLLDNFEWFAGFTERYGIVYVDRNN 109
G+NV GYFAWSLLDNFEW +G++ ++GIVYVD N+
Sbjct: 295 GANVLGYFAWSLLDNFEWMSGYSSKFGIVYVDFNS 191
Score = 42.3 bits (86), Expect = 0.001
Identities = 22/35 (62%), Positives = 23/35 (65%)
Frame = -1 / +3
Query: 108 LLRST*TMP*RSVKPANHSKLSSRDQAK*PCTFDP 4
LL+ST*TMP P HSKLS RD AK*P T P
Sbjct: 192 LLKST*TMPNLDE*PDIHSKLSRRDHAK*PRTLAP 296
Score = 34.1 bits (68), Expect = 0.29
Identities = 15/29 (51%), Positives = 17/29 (58%)
Frame = -2 / +1
Query: 107 CCGRRRQCHNVR*SRQTIQSCPAETKRSS 21
C RRR+C SR + QSC ET RSS
Sbjct: 193 C*SRRRRCRTWTSSRTSTQSCRGETTRSS 279
Score = 29.5 bits (58), Expect = 7.0
Identities = 17/31 (54%), Positives = 21/31 (67%)
Frame = +1 / -3
Query: 16 ARLLRLVSAGQL*MVCRLHRTLWHCLRRPQQ 108
+RLLR+VS QL*+ RL + H LRR QQ
Sbjct: 284 SRLLRVVSPRQL*VDVRLLVQVRHRLRRLQQ 192
Score = 29.5 bits (58), Expect = 7.0
Identities = 11/19 (57%), Positives = 15/19 (78%)
Frame = -3 / +2
Query: 67 AGKPFKVVQQRPSEVALHI 11
AG P KVV++RP EVA ++
Sbjct: 233 AGHPLKVVEERPREVAENV 289
>gb|BJ468501.1|BJ468501 BJ468501 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags39b11 3', mRNA sequence
Length = 688
Score = 69.8 bits (146), Expect = 5e-012
Identities = 24/35 (68%), Positives = 31/35 (88%)
Frame = +2 / -1
Query: 5 GSNVQGYFAWSLLDNFEWFAGFTERYGIVYVDRNN 109
G+NV GYFAWSLLDNFEW +G++ ++GIVYVD N+
Sbjct: 295 GANVLGYFAWSLLDNFEWMSGYSSKFGIVYVDFNS 191
Score = 42.3 bits (86), Expect = 0.001
Identities = 22/35 (62%), Positives = 23/35 (65%)
Frame = -1 / +3
Query: 108 LLRST*TMP*RSVKPANHSKLSSRDQAK*PCTFDP 4
LL+ST*TMP P HSKLS RD AK*P T P
Sbjct: 192 LLKST*TMPNLDE*PDIHSKLSRRDHAK*PRTLAP 296
Score = 34.1 bits (68), Expect = 0.29
Identities = 15/29 (51%), Positives = 17/29 (58%)
Frame = -2 / +1
Query: 107 CCGRRRQCHNVR*SRQTIQSCPAETKRSS 21
C RRR+C SR + QSC ET RSS
Sbjct: 193 C*SRRRRCRTWTSSRTSTQSCRGETTRSS 279
Score = 29.5 bits (58), Expect = 7.0
Identities = 17/31 (54%), Positives = 21/31 (67%)
Frame = +1 / -3
Query: 16 ARLLRLVSAGQL*MVCRLHRTLWHCLRRPQQ 108
+RLLR+VS QL*+ RL + H LRR QQ
Sbjct: 284 SRLLRVVSPRQL*VDVRLLVQVRHRLRRLQQ 192
Score = 29.5 bits (58), Expect = 7.0
Identities = 11/19 (57%), Positives = 15/19 (78%)
Frame = -3 / +2
Query: 67 AGKPFKVVQQRPSEVALHI 11
AG P KVV++RP EVA ++
Sbjct: 233 AGHPLKVVEERPREVAENV 289
>gb|BQ661453.1|BQ661453 HM03J01u HM Hordeum vulgare subsp. vulgare cDNA clone HM03J01
3-PRIME, mRNA sequence
Length = 561
Score = 69.8 bits (146), Expect = 5e-012
Identities = 24/35 (68%), Positives = 31/35 (88%)
Frame = +2 / -1
Query: 5 GSNVQGYFAWSLLDNFEWFAGFTERYGIVYVDRNN 109
G+NV GYFAWSLLDNFEW +G++ ++GIVYVD N+
Sbjct: 336 GANVLGYFAWSLLDNFEWMSGYSSKFGIVYVDFNS 232
Score = 42.3 bits (86), Expect = 0.001
Identities = 22/35 (62%), Positives = 23/35 (65%)
Frame = -1 / +2
Query: 108 LLRST*TMP*RSVKPANHSKLSSRDQAK*PCTFDP 4
LL+ST*TMP P HSKLS RD AK*P T P
Sbjct: 233 LLKST*TMPNLDE*PDIHSKLSRRDHAK*PRTLAP 337
Score = 32.7 bits (65), Expect = 0.76
Identities = 14/29 (48%), Positives = 17/29 (58%)
Frame = -2 / +3
Query: 107 CCGRRRQCHNVR*SRQTIQSCPAETKRSS 21
C RR++C SR + QSC ET RSS
Sbjct: 234 C*SRRKRCRTWTSSRTSTQSCRGETTRSS 320
Score = 29.5 bits (58), Expect = 7.0
Identities = 11/19 (57%), Positives = 15/19 (78%)
Frame = -3 / +1
Query: 67 AGKPFKVVQQRPSEVALHI 11
AG P KVV++RP EVA ++
Sbjct: 274 AGHPLKVVEERPREVAENV 330
Score = 29.5 bits (58), Expect = 7.0
Identities = 17/31 (54%), Positives = 21/31 (67%)
Frame = +1 / -3
Query: 16 ARLLRLVSAGQL*MVCRLHRTLWHCLRRPQQ 108
+RLLR+VS QL*+ RL + H LRR QQ
Sbjct: 325 SRLLRVVSPRQL*VDVRLLVQVRHRLRRLQQ 233
>gb|BM375888.2|BM375888 EBem06_SQ004_L04_R embryo, 21 DPA, no treatment, cv Optic, EBem06
Hordeum vulgare subsp. vulgare cDNA clone
EBem06_SQ004_L04 5', mRNA sequence
Length = 487
Score = 69.8 bits (146), Expect = 5e-012
Identities = 24/35 (68%), Positives = 31/35 (88%)
Frame = +2 / +2
Query: 5 GSNVQGYFAWSLLDNFEWFAGFTERYGIVYVDRNN 109
G+NV GYFAWSLLDNFEW +G++ ++GIVYVD N+
Sbjct: 251 GANVLGYFAWSLLDNFEWMSGYSSKFGIVYVDFNS 355
Score = 42.3 bits (86), Expect = 0.001
Identities = 22/35 (62%), Positives = 23/35 (65%)
Frame = -1 / -2
Query: 108 LLRST*TMP*RSVKPANHSKLSSRDQAK*PCTFDP 4
LL+ST*TMP P HSKLS RD AK*P T P
Sbjct: 354 LLKST*TMPNLDE*PDIHSKLSRRDHAK*PRTLAP 250
Score = 34.1 bits (68), Expect = 0.29
Identities = 15/29 (51%), Positives = 17/29 (58%)
Frame = -2 / -3
Query: 107 CCGRRRQCHNVR*SRQTIQSCPAETKRSS 21
C RRR+C SR + QSC ET RSS
Sbjct: 353 C*SRRRRCRTWTSSRTSTQSCRGETTRSS 267
Score = 29.5 bits (58), Expect = 7.0
Identities = 17/31 (54%), Positives = 21/31 (67%)
Frame = +1 / +1
Query: 16 ARLLRLVSAGQL*MVCRLHRTLWHCLRRPQQ 108
+RLLR+VS QL*+ RL + H LRR QQ
Sbjct: 262 SRLLRVVSPRQL*VDVRLLVQVRHRLRRLQQ 354
Score = 29.5 bits (58), Expect = 7.0
Identities = 11/19 (57%), Positives = 15/19 (78%)
Frame = -3 / -1
Query: 67 AGKPFKVVQQRPSEVALHI 11
AG P KVV++RP EVA ++
Sbjct: 313 AGHPLKVVEERPREVAENV 257
>gb|BQ759428.1|BQ759428 EBpi01_SQ004_B14_R pistil, 1 DPA, no treatment, cv Optic, EBpi01
Hordeum vulgare subsp. vulgare cDNA clone
EBpi01_SQ004_B14 5', mRNA sequence
Length = 343
Score = 69.8 bits (146), Expect = 5e-012
Identities = 24/35 (68%), Positives = 31/35 (88%)
Frame = +2 / +1
Query: 5 GSNVQGYFAWSLLDNFEWFAGFTERYGIVYVDRNN 109
G+NV GYFAWSLLDNFEW +G++ ++GIVYVD N+
Sbjct: 1 GANVLGYFAWSLLDNFEWMSGYSSKFGIVYVDFNS 105
Score = 40.0 bits (81), Expect = 0.005
Identities = 21/32 (65%), Positives = 22/32 (68%)
Frame = -1 / -3
Query: 108 LLRST*TMP*RSVKPANHSKLSSRDQAK*PCT 13
LL+ST*TMP P HSKLS RD AK*P T
Sbjct: 104 LLKST*TMPNLDE*PDIHSKLSRRDHAK*PRT 9
Score = 34.1 bits (68), Expect = 0.29
Identities = 15/29 (51%), Positives = 17/29 (58%)
Frame = -2 / -1
Query: 107 CCGRRRQCHNVR*SRQTIQSCPAETKRSS 21
C RRR+C SR + QSC ET RSS
Sbjct: 103 C*SRRRRCRTWTSSRTSTQSCRGETTRSS 17
Score = 29.5 bits (58), Expect = 7.0
Identities = 11/19 (57%), Positives = 15/19 (78%)
Frame = -3 / -2
Query: 67 AGKPFKVVQQRPSEVALHI 11
AG P KVV++RP EVA ++
Sbjct: 63 AGHPLKVVEERPREVAENV 7
Score = 29.5 bits (58), Expect = 7.0
Identities = 17/31 (54%), Positives = 21/31 (67%)
Frame = +1 / +3
Query: 16 ARLLRLVSAGQL*MVCRLHRTLWHCLRRPQQ 108
+RLLR+VS QL*+ RL + H LRR QQ
Sbjct: 12 SRLLRVVSPRQL*VDVRLLVQVRHRLRRLQQ 104
>gb|BQ764858.1|BQ764858 EBca01_SQ005_H06_R carpel, pre-anthesis, no treatment, cv Optic,
EBca01 Hordeum vulgare subsp. vulgare cDNA clone
EBca01_SQ005_H06 5', mRNA sequence
Length = 433
Score = 69.8 bits (146), Expect = 5e-012
Identities = 24/35 (68%), Positives = 31/35 (88%)
Frame = +2 / +1
Query: 5 GSNVQGYFAWSLLDNFEWFAGFTERYGIVYVDRNN 109
G+NV GYFAWSLLDNFEW +G++ ++GIVYVD N+
Sbjct: 94 GANVLGYFAWSLLDNFEWMSGYSSKFGIVYVDFNS 198
Score = 42.3 bits (86), Expect = 0.001
Identities = 22/35 (62%), Positives = 23/35 (65%)
Frame = -1 / -3
Query: 108 LLRST*TMP*RSVKPANHSKLSSRDQAK*PCTFDP 4
LL+ST*TMP P HSKLS RD AK*P T P
Sbjct: 197 LLKST*TMPNLDE*PDIHSKLSRRDHAK*PRTLAP 93
Score = 34.1 bits (68), Expect = 0.29
Identities = 15/29 (51%), Positives = 17/29 (58%)
Frame = -2 / -1
Query: 107 CCGRRRQCHNVR*SRQTIQSCPAETKRSS 21
C RRR+C SR + QSC ET RSS
Sbjct: 196 C*SRRRRCRTWTSSRTSTQSCRGETTRSS 110
Score = 29.5 bits (58), Expect = 7.0
Identities = 11/19 (57%), Positives = 15/19 (78%)
Frame = -3 / -2
Query: 67 AGKPFKVVQQRPSEVALHI 11
AG P KVV++RP EVA ++
Sbjct: 156 AGHPLKVVEERPREVAENV 100
Score = 29.5 bits (58), Expect = 7.0
Identities = 17/31 (54%), Positives = 21/31 (67%)
Frame = +1 / +3
Query: 16 ARLLRLVSAGQL*MVCRLHRTLWHCLRRPQQ 108
+RLLR+VS QL*+ RL + H LRR QQ
Sbjct: 105 SRLLRVVSPRQL*VDVRLLVQVRHRLRRLQQ 197
>gb|BU972640.1|BU972640 HB22E11r BC Hordeum vulgare subsp. vulgare cDNA clone HB22E11
5-PRIME, mRNA sequence
Length = 591
Score = 69.8 bits (146), Expect = 5e-012
Identities = 24/35 (68%), Positives = 31/35 (88%)
Frame = +2 / +1
Query: 5 GSNVQGYFAWSLLDNFEWFAGFTERYGIVYVDRNN 109
G+NV GYFAWSLLDNFEW +G++ ++GIVYVD N+
Sbjct: 451 GANVLGYFAWSLLDNFEWMSGYSSKFGIVYVDFNS 555
Score = 42.3 bits (86), Expect = 0.001
Identities = 22/35 (62%), Positives = 23/35 (65%)
Frame = -1 / -2
Query: 108 LLRST*TMP*RSVKPANHSKLSSRDQAK*PCTFDP 4
LL+ST*TMP P HSKLS RD AK*P T P
Sbjct: 554 LLKST*TMPNLDE*PDIHSKLSRRDHAK*PRTLAP 450
Score = 34.1 bits (68), Expect = 0.29
Identities = 15/29 (51%), Positives = 17/29 (58%)
Frame = -2 / -3
Query: 107 CCGRRRQCHNVR*SRQTIQSCPAETKRSS 21
C RRR+C SR + QSC ET RSS
Sbjct: 553 C*SRRRRCRTWTSSRTSTQSCRGETTRSS 467
Score = 29.5 bits (58), Expect = 7.0
Identities = 17/31 (54%), Positives = 21/31 (67%)
Frame = +1 / +3
Query: 16 ARLLRLVSAGQL*MVCRLHRTLWHCLRRPQQ 108
+RLLR+VS QL*+ RL + H LRR QQ
Sbjct: 462 SRLLRVVSPRQL*VDVRLLVQVRHRLRRLQQ 554
Score = 29.5 bits (58), Expect = 7.0
Identities = 11/19 (57%), Positives = 15/19 (78%)
Frame = -3 / -1
Query: 67 AGKPFKVVQQRPSEVALHI 11
AG P KVV++RP EVA ++
Sbjct: 513 AGHPLKVVEERPREVAENV 457
>gb|CA028155.1|CA028155 HZ61C14r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ61C14
5-PRIME, mRNA sequence
Length = 608
Score = 69.8 bits (146), Expect = 5e-012
Identities = 24/35 (68%), Positives = 31/35 (88%)
Frame = +2 / +3
Query: 5 GSNVQGYFAWSLLDNFEWFAGFTERYGIVYVDRNN 109
G+NV GYFAWSLLDNFEW +G++ ++GIVYVD N+
Sbjct: 270 GANVLGYFAWSLLDNFEWMSGYSSKFGIVYVDFNS 374
Score = 42.3 bits (86), Expect = 0.001
Identities = 22/35 (62%), Positives = 23/35 (65%)
Frame = -1 / -2
Query: 108 LLRST*TMP*RSVKPANHSKLSSRDQAK*PCTFDP 4
LL+ST*TMP P HSKLS RD AK*P T P
Sbjct: 373 LLKST*TMPNLDE*PDIHSKLSRRDHAK*PRTLAP 269
Score = 34.1 bits (68), Expect = 0.29
Identities = 15/29 (51%), Positives = 17/29 (58%)
Frame = -2 / -3
Query: 107 CCGRRRQCHNVR*SRQTIQSCPAETKRSS 21
C RRR+C SR + QSC ET RSS
Sbjct: 372 C*SRRRRCRTWTSSRTSTQSCRGETTRSS 286
Score = 29.5 bits (58), Expect = 7.0
Identities = 17/31 (54%), Positives = 21/31 (67%)
Frame = +1 / +2
Query: 16 ARLLRLVSAGQL*MVCRLHRTLWHCLRRPQQ 108
+RLLR+VS QL*+ RL + H LRR QQ
Sbjct: 281 SRLLRVVSPRQL*VDVRLLVQVRHRLRRLQQ 373
Score = 29.5 bits (58), Expect = 7.0
Identities = 11/19 (57%), Positives = 15/19 (78%)
Frame = -3 / -1
Query: 67 AGKPFKVVQQRPSEVALHI 11
AG P KVV++RP EVA ++
Sbjct: 332 AGHPLKVVEERPREVAENV 276
>gb|CB880505.1|CB880505 HM06L21w HM Hordeum vulgare subsp. vulgare cDNA clone HM06L21
3-PRIME, mRNA sequence
Length = 642
Score = 69.8 bits (146), Expect = 5e-012
Identities = 24/35 (68%), Positives = 31/35 (88%)
Frame = +2 / -3
Query: 5 GSNVQGYFAWSLLDNFEWFAGFTERYGIVYVDRNN 109
G+NV GYFAWSLLDNFEW +G++ ++GIVYVD N+
Sbjct: 316 GANVLGYFAWSLLDNFEWMSGYSSKFGIVYVDFNS 212
Score = 42.3 bits (86), Expect = 0.001
Identities = 22/35 (62%), Positives = 23/35 (65%)
Frame = -1 / +3
Query: 108 LLRST*TMP*RSVKPANHSKLSSRDQAK*PCTFDP 4
LL+ST*TMP P HSKLS RD AK*P T P
Sbjct: 213 LLKST*TMPNLDE*PDIHSKLSRRDHAK*PRTLAP 317
Score = 34.1 bits (68), Expect = 0.29
Identities = 15/29 (51%), Positives = 17/29 (58%)
Frame = -2 / +1
Query: 107 CCGRRRQCHNVR*SRQTIQSCPAETKRSS 21
C RRR+C SR + QSC ET RSS
Sbjct: 214 C*SRRRRCRTWTSSRTSTQSCRGETTRSS 300
Score = 29.5 bits (58), Expect = 7.0
Identities = 17/31 (54%), Positives = 21/31 (67%)
Frame = +1 / -2
Query: 16 ARLLRLVSAGQL*MVCRLHRTLWHCLRRPQQ 108
+RLLR+VS QL*+ RL + H LRR QQ
Sbjct: 305 SRLLRVVSPRQL*VDVRLLVQVRHRLRRLQQ 213
Score = 29.5 bits (58), Expect = 7.0
Identities = 11/19 (57%), Positives = 15/19 (78%)
Frame = -3 / +2
Query: 67 AGKPFKVVQQRPSEVALHI 11
AG P KVV++RP EVA ++
Sbjct: 254 AGHPLKVVEERPREVAENV 310
>gb|CB880520.1|CB880520 HM06M21w HM Hordeum vulgare subsp. vulgare cDNA clone HM06M21
3-PRIME, mRNA sequence
Length = 403
Score = 69.8 bits (146), Expect = 5e-012
Identities = 24/35 (68%), Positives = 31/35 (88%)
Frame = +2 / -1
Query: 5 GSNVQGYFAWSLLDNFEWFAGFTERYGIVYVDRNN 109
G+NV GYFAWSLLDNFEW +G++ ++GIVYVD N+
Sbjct: 340 GANVLGYFAWSLLDNFEWMSGYSSKFGIVYVDFNS 236
Score = 42.3 bits (86), Expect = 0.001
Identities = 22/35 (62%), Positives = 23/35 (65%)
Frame = -1 / +3
Query: 108 LLRST*TMP*RSVKPANHSKLSSRDQAK*PCTFDP 4
LL+ST*TMP P HSKLS RD AK*P T P
Sbjct: 237 LLKST*TMPNLDE*PDIHSKLSRRDHAK*PRTLAP 341
Score = 34.1 bits (68), Expect = 0.29
Identities = 15/29 (51%), Positives = 17/29 (58%)
Frame = -2 / +1
Query: 107 CCGRRRQCHNVR*SRQTIQSCPAETKRSS 21
C RRR+C SR + QSC ET RSS
Sbjct: 238 C*SRRRRCRTWTSSRTSTQSCRGETTRSS 324
Score = 29.5 bits (58), Expect = 7.0
Identities = 11/19 (57%), Positives = 15/19 (78%)
Frame = -3 / +2
Query: 67 AGKPFKVVQQRPSEVALHI 11
AG P KVV++RP EVA ++
Sbjct: 278 AGHPLKVVEERPREVAENV 334
Score = 29.5 bits (58), Expect = 7.0
Identities = 17/31 (54%), Positives = 21/31 (67%)
Frame = +1 / -3
Query: 16 ARLLRLVSAGQL*MVCRLHRTLWHCLRRPQQ 108
+RLLR+VS QL*+ RL + H LRR QQ
Sbjct: 329 SRLLRVVSPRQL*VDVRLLVQVRHRLRRLQQ 237
>gb|BE422156.1|BE422156 HWM020cG.09r ITEC HWM Barley Leaf Library Hordeum vulgare subsp.
vulgare cDNA clone HWM020cG.09, mRNA sequence
Length = 1023
Score = 69.3 bits (145), Expect = 7e-012
Identities = 24/35 (68%), Positives = 31/35 (88%)
Frame = +2 / +1
Query: 5 GSNVQGYFAWSLLDNFEWFAGFTERYGIVYVDRNN 109
G+NV GYFAWSLLDNFEW +G++ ++GIVYVD N+
Sbjct: 604 GANVLGYFAWSLLDNFEWMSGYSXKFGIVYVDFNS 708
Score = 42.3 bits (86), Expect = 0.001
Identities = 22/35 (62%), Positives = 23/35 (65%)
Frame = -1 / -2
Query: 108 LLRST*TMP*RSVKPANHSKLSSRDQAK*PCTFDP 4
LL+ST*TMP P HSKLS RD AK*P T P
Sbjct: 707 LLKST*TMPNLXE*PDIHSKLSRRDHAK*PRTLAP 603
Score = 35.0 bits (70), Expect = 0.16
Identities = 15/29 (51%), Positives = 17/29 (58%)
Frame = -2 / -3
Query: 107 CCGRRRQCHNVR*SRQTIQSCPAETKRSS 21
C RRR+C SR + QSC ET RSS
Sbjct: 706 C*SRRRRCRTXTSSRTSTQSCRGETTRSS 620
Score = 29.5 bits (58), Expect = 7.0
Identities = 17/31 (54%), Positives = 21/31 (67%)
Frame = +1 / +3
Query: 16 ARLLRLVSAGQL*MVCRLHRTLWHCLRRPQQ 108
+RLLR+VS QL*+ RL + H LRR QQ
Sbjct: 615 SRLLRVVSPRQL*VDVRLLVQVRHRLRRLQQ 707
Score = 29.5 bits (58), Expect = 7.0
Identities = 11/19 (57%), Positives = 15/19 (78%)
Frame = -3 / -1
Query: 67 AGKPFKVVQQRPSEVALHI 11
AG P KVV++RP EVA ++
Sbjct: 666 AGHPLKVVEERPREVAENV 610
>gb|BQ469152.1|BQ469152 HM03J01r HM Hordeum vulgare subsp. vulgare cDNA clone HM03J01
5-PRIME, mRNA sequence
Length = 578
Score = 69.3 bits (145), Expect = 7e-012
Identities = 24/34 (70%), Positives = 30/34 (88%)
Frame = +2 / +3
Query: 5 GSNVQGYFAWSLLDNFEWFAGFTERYGIVYVDRN 106
G+NV GYFAWSLLDNFEW +G++ ++GIVYVD N
Sbjct: 477 GANVLGYFAWSLLDNFEWMSGYSSKFGIVYVDFN 578
Score = 40.5 bits (82), Expect = 0.003
Identities = 21/34 (61%), Positives = 22/34 (64%)
Frame = -1 / -2
Query: 105 LRST*TMP*RSVKPANHSKLSSRDQAK*PCTFDP 4
L+ST*TMP P HSKLS RD AK*P T P
Sbjct: 577 LKST*TMPNLDE*PDIHSKLSRRDHAK*PRTLAP 476
Score = 31.8 bits (63), Expect = 1.4
Identities = 14/26 (53%), Positives = 16/26 (61%)
Frame = -2 / -3
Query: 98 RRRQCHNVR*SRQTIQSCPAETKRSS 21
RRR+C SR + QSC ET RSS
Sbjct: 570 RRRRCRTWTSSRTSTQSCRGETTRSS 493
Score = 29.5 bits (58), Expect = 7.0
Identities = 11/19 (57%), Positives = 15/19 (78%)
Frame = -3 / -1
Query: 67 AGKPFKVVQQRPSEVALHI 11
AG P KVV++RP EVA ++
Sbjct: 539 AGHPLKVVEERPREVAENV 483
>gb|AV921614.1|AV921614 AV921614 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags12a16 3', mRNA sequence
Length = 308
Score = 68.4 bits (143), Expect = 1e-011
Identities = 23/35 (65%), Positives = 30/35 (85%)
Frame = +2 / -2
Query: 5 GSNVQGYFAWSLLDNFEWFAGFTERYGIVYVDRNN 109
G+NV GYF WSLLDNFEW +G++ ++GIVYVD N+
Sbjct: 292 GANVXGYFXWSLLDNFEWMSGYSSKFGIVYVDFNS 188
Score = 36.3 bits (73), Expect = 0.060
Identities = 19/35 (54%), Positives = 20/35 (57%)
Frame = -1 / +3
Query: 108 LLRST*TMP*RSVKPANHSKLSSRDQAK*PCTFDP 4
LL+ST TMP P HSKLS RD K P T P
Sbjct: 189 LLKSTXTMPNLDE*PDIHSKLSRRDHXKXPXTLAP 293
Score = 29.5 bits (58), Expect = 7.0
Identities = 13/28 (46%), Positives = 15/28 (53%)
Frame = -2 / +1
Query: 107 CCGRRRQCHNVR*SRQTIQSCPAETKRS 24
C RR +C SR + QSC ET RS
Sbjct: 190 C*SRRXRCRTWTSSRTSTQSCXGETTRS 273
>gb|AV917200.1|AV917200 AV917200 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags8l06 5', mRNA sequence
Length = 474
Score = 68.0 bits (142), Expect = 2e-011
Identities = 23/35 (65%), Positives = 30/35 (85%)
Frame = +2 / +1
Query: 5 GSNVQGYFAWSLLDNFEWFAGFTERYGIVYVDRNN 109
G+NV GYFAW LLDNFEW +G++ ++GIVYVD N+
Sbjct: 364 GANVLGYFAWXLLDNFEWMSGYSSKFGIVYVDFNS 468
Score = 39.1 bits (79), Expect = 0.009
Identities = 21/35 (60%), Positives = 22/35 (62%)
Frame = -1 / -2
Query: 108 LLRST*TMP*RSVKPANHSKLSSRDQAK*PCTFDP 4
LL+ST*TMP P HSKLS R AK*P T P
Sbjct: 467 LLKST*TMPNLDE*PDIHSKLSRRXHAK*PRTLAP 363
Score = 31.8 bits (63), Expect = 1.4
Identities = 14/29 (48%), Positives = 16/29 (55%)
Frame = -2 / -3
Query: 107 CCGRRRQCHNVR*SRQTIQSCPAETKRSS 21
C RRR+C SR + QSC E RSS
Sbjct: 466 C*SRRRRCRTWTSSRTSTQSCRGEXTRSS 380
>gb|AL509490.1|AL509490 AL509490 Hordeum vulgare Barke developing caryopsis (3.-15.DAP)
Hordeum vulgare subsp. vulgare cDNA clone HY01P16u 3',
mRNA sequence
Length = 473
Score = 67.5 bits (141), Expect = 3e-011
Identities = 24/35 (68%), Positives = 30/35 (85%)
Frame = +2 / -1
Query: 5 GSNVQGYFAWSLLDNFEWFAGFTERYGIVYVDRNN 109
G+NV GYFAWSLLDNFEW +G++ + GIVYVD N+
Sbjct: 326 GANVLGYFAWSLLDNFEWMSGYSAKXGIVYVDFNS 222
Score = 40.5 bits (82), Expect = 0.003
Identities = 21/35 (60%), Positives = 23/35 (65%)
Frame = -1 / +1
Query: 108 LLRST*TMP*RSVKPANHSKLSSRDQAK*PCTFDP 4
LL+ST*TMP + P HSKLS RD AK P T P
Sbjct: 223 LLKST*TMPXLAE*PDIHSKLSRRDHAKXPRTLAP 327
>gb|BE601818.2|BE601818 HVSMEh0099K11f Hordeum vulgare 5-45 DAP spike EST library
HVcDNA0009 (5 to 45 DAP) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEh0099K11f, mRNA sequence
Length = 503
Score = 67.5 bits (141), Expect = 3e-011
Identities = 25/34 (73%), Positives = 28/34 (82%)
Frame = +2 / +1
Query: 5 GSNVQGYFAWSLLDNFEWFAGFTERYGIVYVDRN 106
G+ V GYFAWSLLDNFEW G+T R+GIVYVD N
Sbjct: 301 GARVAGYFAWSLLDNFEWRLGYTARFGIVYVDFN 402
Score = 51.0 bits (105), Expect = 2e-006
Identities = 24/35 (68%), Positives = 28/35 (80%)
Frame = -1 / -1
Query: 108 LLRST*TMP*RSVKPANHSKLSSRDQAK*PCTFDP 4
+L+ST*TMP R+V P+ HSKLSSRDQAK P T P
Sbjct: 404 VLKST*TMPKRAV*PSLHSKLSSRDQAKYPATRAP 300
Score = 30.4 bits (60), Expect = 3.7
Identities = 12/24 (50%), Positives = 18/24 (75%)
Frame = -2 / -2
Query: 92 RQCHNVR*SRQTIQSCPAETKRSS 21
R+C N + SR + +SC AETK+S+
Sbjct: 388 RRCRNGQCSRVSTRSCQAETKQST 317
>gb|BE601859.2|BE601859 HVSMEh0099M17f Hordeum vulgare 5-45 DAP spike EST library
HVcDNA0009 (5 to 45 DAP) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEh0099M17f, mRNA sequence
Length = 499
Score = 67.5 bits (141), Expect = 3e-011
Identities = 25/34 (73%), Positives = 28/34 (82%)
Frame = +2 / -1
Query: 5 GSNVQGYFAWSLLDNFEWFAGFTERYGIVYVDRN 106
G+ V GYFAWSLLDNFEW G+T R+GIVYVD N
Sbjct: 400 GARVAGYFAWSLLDNFEWRLGYTARFGIVYVDFN 299
Score = 51.0 bits (105), Expect = 2e-006
Identities = 24/35 (68%), Positives = 28/35 (80%)
Frame = -1 / +3
Query: 108 LLRST*TMP*RSVKPANHSKLSSRDQAK*PCTFDP 4
+L+ST*TMP R+V P+ HSKLSSRDQAK P T P
Sbjct: 297 VLKST*TMPKRAV*PSLHSKLSSRDQAKYPATRAP 401
Score = 30.4 bits (60), Expect = 3.7
Identities = 12/24 (50%), Positives = 18/24 (75%)
Frame = -2 / +1
Query: 92 RQCHNVR*SRQTIQSCPAETKRSS 21
R+C N + SR + +SC AETK+S+
Sbjct: 313 RRCRNGQCSRVSTRSCQAETKQST 384
>gb|BI947748.1|BI947748 HVSMEl0006L16f Hordeum vulgare spike EST library HVcDNA0012
(Fusarium infected) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEl0006L16f, mRNA sequence
Length = 833
Score = 67.5 bits (141), Expect = 3e-011
Identities = 25/34 (73%), Positives = 28/34 (82%)
Frame = +2 / -3
Query: 5 GSNVQGYFAWSLLDNFEWFAGFTERYGIVYVDRN 106
G+ V GYFAWSLLDNFEW G+T R+GIVYVD N
Sbjct: 504 GARVAGYFAWSLLDNFEWRLGYTARFGIVYVDFN 403
Score = 51.0 bits (105), Expect = 2e-006
Identities = 24/35 (68%), Positives = 28/35 (80%)
Frame = -1 / +2
Query: 108 LLRST*TMP*RSVKPANHSKLSSRDQAK*PCTFDP 4
+L+ST*TMP R+V P+ HSKLSSRDQAK P T P
Sbjct: 401 VLKST*TMPKRAV*PSLHSKLSSRDQAKYPATRAP 505
Score = 30.4 bits (60), Expect = 3.7
Identities = 12/24 (50%), Positives = 18/24 (75%)
Frame = -2 / +3
Query: 92 RQCHNVR*SRQTIQSCPAETKRSS 21
R+C N + SR + +SC AETK+S+
Sbjct: 417 RRCRNGQCSRVSTRSCQAETKQST 488
>gb|BI949909.1|BI949909 HVSMEl0016O06f Hordeum vulgare spike EST library HVcDNA0012
(Fusarium infected) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEl0016O06f, mRNA sequence
Length = 445
Score = 67.5 bits (141), Expect = 3e-011
Identities = 25/34 (73%), Positives = 28/34 (82%)
Frame = +2 / +2
Query: 5 GSNVQGYFAWSLLDNFEWFAGFTERYGIVYVDRN 106
G+ V GYFAWSLLDNFEW G+T R+GIVYVD N
Sbjct: 173 GARVAGYFAWSLLDNFEWRLGYTARFGIVYVDFN 274
Score = 51.0 bits (105), Expect = 2e-006
Identities = 24/35 (68%), Positives = 28/35 (80%)
Frame = -1 / -2
Query: 108 LLRST*TMP*RSVKPANHSKLSSRDQAK*PCTFDP 4
+L+ST*TMP R+V P+ HSKLSSRDQAK P T P
Sbjct: 276 VLKST*TMPKRAV*PSLHSKLSSRDQAKYPATRAP 172
Score = 30.4 bits (60), Expect = 3.7
Identities = 12/24 (50%), Positives = 18/24 (75%)
Frame = -2 / -3
Query: 92 RQCHNVR*SRQTIQSCPAETKRSS 21
R+C N + SR + +SC AETK+S+
Sbjct: 260 RRCRNGQCSRVSTRSCQAETKQST 189
>gb|BI951308.1|BI951308 HVSMEl0025H09f Hordeum vulgare spike EST library HVcDNA0012
(Fusarium infected) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEl0025H09f, mRNA sequence
Length = 565
Score = 67.5 bits (141), Expect = 3e-011
Identities = 25/34 (73%), Positives = 28/34 (82%)
Frame = +2 / +1
Query: 5 GSNVQGYFAWSLLDNFEWFAGFTERYGIVYVDRN 106
G+ V GYFAWSLLDNFEW G+T R+GIVYVD N
Sbjct: 286 GARVAGYFAWSLLDNFEWRLGYTARFGIVYVDFN 387
Score = 51.0 bits (105), Expect = 2e-006
Identities = 24/35 (68%), Positives = 28/35 (80%)
Frame = -1 / -3
Query: 108 LLRST*TMP*RSVKPANHSKLSSRDQAK*PCTFDP 4
+L+ST*TMP R+V P+ HSKLSSRDQAK P T P
Sbjct: 389 VLKST*TMPKRAV*PSLHSKLSSRDQAKYPATRAP 285
Score = 30.4 bits (60), Expect = 3.7
Identities = 12/24 (50%), Positives = 18/24 (75%)
Frame = -2 / -1
Query: 92 RQCHNVR*SRQTIQSCPAETKRSS 21
R+C N + SR + +SC AETK+S+
Sbjct: 373 RRCRNGQCSRVSTRSCQAETKQST 302
>gb|BE196548.3|BE196548 HVSMEh0092J16f Hordeum vulgare 5-45 DAP spike EST library
HVcDNA0009 (5 to 45 DAP) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEh0092J16f, mRNA sequence
Length = 674
Score = 67.5 bits (141), Expect = 3e-011
Identities = 25/34 (73%), Positives = 28/34 (82%)
Frame = +2 / +3
Query: 5 GSNVQGYFAWSLLDNFEWFAGFTERYGIVYVDRN 106
G+ V GYFAWSLLDNFEW G+T R+GIVYVD N
Sbjct: 198 GARVAGYFAWSLLDNFEWRLGYTARFGIVYVDFN 299
Score = 51.0 bits (105), Expect = 2e-006
Identities = 24/35 (68%), Positives = 28/35 (80%)
Frame = -1 / -2
Query: 108 LLRST*TMP*RSVKPANHSKLSSRDQAK*PCTFDP 4
+L+ST*TMP R+V P+ HSKLSSRDQAK P T P
Sbjct: 301 VLKST*TMPKRAV*PSLHSKLSSRDQAKYPATRAP 197
Score = 30.4 bits (60), Expect = 3.7
Identities = 12/24 (50%), Positives = 18/24 (75%)
Frame = -2 / -3
Query: 92 RQCHNVR*SRQTIQSCPAETKRSS 21
R+C N + SR + +SC AETK+S+
Sbjct: 285 RRCRNGQCSRVSTRSCQAETKQST 214
>gb|BE601804.3|BE601804 HVSMEh0099J17f Hordeum vulgare 5-45 DAP spike EST library
HVcDNA0009 (5 to 45 DAP) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEh0099J17f, mRNA sequence
Length = 627
Score = 67.5 bits (141), Expect = 3e-011
Identities = 25/34 (73%), Positives = 28/34 (82%)
Frame = +2 / +2
Query: 5 GSNVQGYFAWSLLDNFEWFAGFTERYGIVYVDRN 106
G+ V GYFAWSLLDNFEW G+T R+GIVYVD N
Sbjct: 209 GARVAGYFAWSLLDNFEWRLGYTARFGIVYVDFN 310
Score = 51.0 bits (105), Expect = 2e-006
Identities = 24/35 (68%), Positives = 28/35 (80%)
Frame = -1 / -1
Query: 108 LLRST*TMP*RSVKPANHSKLSSRDQAK*PCTFDP 4
+L+ST*TMP R+V P+ HSKLSSRDQAK P T P
Sbjct: 312 VLKST*TMPKRAV*PSLHSKLSSRDQAKYPATRAP 208
Score = 30.4 bits (60), Expect = 3.7
Identities = 12/24 (50%), Positives = 18/24 (75%)
Frame = -2 / -2
Query: 92 RQCHNVR*SRQTIQSCPAETKRSS 21
R+C N + SR + +SC AETK+S+
Sbjct: 296 RRCRNGQCSRVSTRSCQAETKQST 225
>gb|BG418369.2|BG418369 HVSMEk0022H13f Hordeum vulgare testa/pericarp EST library
HVcDNA0013 (normal) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEk0022H13f, mRNA sequence
Length = 538
Score = 67.5 bits (141), Expect = 3e-011
Identities = 25/34 (73%), Positives = 28/34 (82%)
Frame = +2 / +3
Query: 5 GSNVQGYFAWSLLDNFEWFAGFTERYGIVYVDRN 106
G+ V GYFAWSLLDNFEW G+T R+GIVYVD N
Sbjct: 108 GARVAGYFAWSLLDNFEWRLGYTARFGIVYVDFN 209
Score = 51.0 bits (105), Expect = 2e-006
Identities = 24/35 (68%), Positives = 28/35 (80%)
Frame = -1 / -1
Query: 108 LLRST*TMP*RSVKPANHSKLSSRDQAK*PCTFDP 4
+L+ST*TMP R+V P+ HSKLSSRDQAK P T P
Sbjct: 211 VLKST*TMPKRAV*PSLHSKLSSRDQAKYPATRAP 107
Score = 30.4 bits (60), Expect = 3.7
Identities = 12/24 (50%), Positives = 18/24 (75%)
Frame = -2 / -2
Query: 92 RQCHNVR*SRQTIQSCPAETKRSS 21
R+C N + SR + +SC AETK+S+
Sbjct: 195 RRCRNGQCSRVSTRSCQAETKQST 124
>gb|BQ465020.1|BQ465020 HU02G21r HU Hordeum vulgare subsp. vulgare cDNA clone HU02G21
5-PRIME, mRNA sequence
Length = 569
Score = 67.5 bits (141), Expect = 3e-011
Identities = 25/34 (73%), Positives = 28/34 (82%)
Frame = +2 / +3
Query: 5 GSNVQGYFAWSLLDNFEWFAGFTERYGIVYVDRN 106
G+ V GYFAWSLLDNFEW G+T R+GIVYVD N
Sbjct: 108 GARVAGYFAWSLLDNFEWRLGYTARFGIVYVDFN 209
Score = 51.0 bits (105), Expect = 2e-006
Identities = 24/35 (68%), Positives = 28/35 (80%)
Frame = -1 / -2
Query: 108 LLRST*TMP*RSVKPANHSKLSSRDQAK*PCTFDP 4
+L+ST*TMP R+V P+ HSKLSSRDQAK P T P
Sbjct: 211 VLKST*TMPKRAV*PSLHSKLSSRDQAKYPATRAP 107
Score = 30.4 bits (60), Expect = 3.7
Identities = 12/24 (50%), Positives = 18/24 (75%)
Frame = -2 / -3
Query: 92 RQCHNVR*SRQTIQSCPAETKRSS 21
R+C N + SR + +SC AETK+S+
Sbjct: 195 RRCRNGQCSRVSTRSCQAETKQST 124
>gb|BQ466282.1|BQ466282 HT02B16r HT Hordeum vulgare subsp. vulgare cDNA clone HT02B16
5-PRIME, mRNA sequence
Length = 611
Score = 67.5 bits (141), Expect = 3e-011
Identities = 25/34 (73%), Positives = 28/34 (82%)
Frame = +2 / +1
Query: 5 GSNVQGYFAWSLLDNFEWFAGFTERYGIVYVDRN 106
G+ V GYFAWSLLDNFEW G+T R+GIVYVD N
Sbjct: 277 GARVAGYFAWSLLDNFEWRLGYTARFGIVYVDFN 378
Score = 51.0 bits (105), Expect = 2e-006
Identities = 24/35 (68%), Positives = 28/35 (80%)
Frame = -1 / -1
Query: 108 LLRST*TMP*RSVKPANHSKLSSRDQAK*PCTFDP 4
+L+ST*TMP R+V P+ HSKLSSRDQAK P T P
Sbjct: 380 VLKST*TMPKRAV*PSLHSKLSSRDQAKYPATRAP 276
Score = 30.4 bits (60), Expect = 3.7
Identities = 12/24 (50%), Positives = 18/24 (75%)
Frame = -2 / -2
Query: 92 RQCHNVR*SRQTIQSCPAETKRSS 21
R+C N + SR + +SC AETK+S+
Sbjct: 364 RRCRNGQCSRVSTRSCQAETKQST 293
>gb|BQ657405.1|BQ657405 HA08I10u HA Hordeum vulgare subsp. vulgare cDNA clone HA08I10
3-PRIME, mRNA sequence
Length = 599
Score = 67.5 bits (141), Expect = 3e-011
Identities = 25/34 (73%), Positives = 28/34 (82%)
Frame = +2 / -1
Query: 5 GSNVQGYFAWSLLDNFEWFAGFTERYGIVYVDRN 106
G+ V GYFAWSLLDNFEW G+T R+GIVYVD N
Sbjct: 446 GARVAGYFAWSLLDNFEWRLGYTARFGIVYVDFN 345
Score = 51.0 bits (105), Expect = 2e-006
Identities = 24/35 (68%), Positives = 28/35 (80%)
Frame = -1 / +1
Query: 108 LLRST*TMP*RSVKPANHSKLSSRDQAK*PCTFDP 4
+L+ST*TMP R+V P+ HSKLSSRDQAK P T P
Sbjct: 343 VLKST*TMPKRAV*PSLHSKLSSRDQAKYPATRAP 447
Score = 30.4 bits (60), Expect = 3.7
Identities = 12/24 (50%), Positives = 18/24 (75%)
Frame = -2 / +2
Query: 92 RQCHNVR*SRQTIQSCPAETKRSS 21
R+C N + SR + +SC AETK+S+
Sbjct: 359 RRCRNGQCSRVSTRSCQAETKQST 430
>gb|BQ659818.1|BQ659818 HF01M24w HF Hordeum vulgare subsp. vulgare cDNA clone HF01M24
3-PRIME, mRNA sequence
Length = 681
Score = 67.5 bits (141), Expect = 3e-011
Identities = 25/34 (73%), Positives = 28/34 (82%)
Frame = +2 / -1
Query: 5 GSNVQGYFAWSLLDNFEWFAGFTERYGIVYVDRN 106
G+ V GYFAWSLLDNFEW G+T R+GIVYVD N
Sbjct: 462 GARVAGYFAWSLLDNFEWRLGYTARFGIVYVDFN 361
Score = 51.0 bits (105), Expect = 2e-006
Identities = 24/35 (68%), Positives = 28/35 (80%)
Frame = -1 / +2
Query: 108 LLRST*TMP*RSVKPANHSKLSSRDQAK*PCTFDP 4
+L+ST*TMP R+V P+ HSKLSSRDQAK P T P
Sbjct: 359 VLKST*TMPKRAV*PSLHSKLSSRDQAKYPATRAP 463
Score = 30.4 bits (60), Expect = 3.7
Identities = 12/24 (50%), Positives = 18/24 (75%)
Frame = -2 / +3
Query: 92 RQCHNVR*SRQTIQSCPAETKRSS 21
R+C N + SR + +SC AETK+S+
Sbjct: 375 RRCRNGQCSRVSTRSCQAETKQST 446
>gb|BQ663387.1|BQ663387 HU02G21u HU Hordeum vulgare subsp. vulgare cDNA clone HU02G21
3-PRIME, mRNA sequence
Length = 511
Score = 67.5 bits (141), Expect = 3e-011
Identities = 25/34 (73%), Positives = 28/34 (82%)
Frame = +2 / -2
Query: 5 GSNVQGYFAWSLLDNFEWFAGFTERYGIVYVDRN 106
G+ V GYFAWSLLDNFEW G+T R+GIVYVD N
Sbjct: 462 GARVAGYFAWSLLDNFEWRLGYTARFGIVYVDFN 361
Score = 51.0 bits (105), Expect = 2e-006
Identities = 24/35 (68%), Positives = 28/35 (80%)
Frame = -1 / +2
Query: 108 LLRST*TMP*RSVKPANHSKLSSRDQAK*PCTFDP 4
+L+ST*TMP R+V P+ HSKLSSRDQAK P T P
Sbjct: 359 VLKST*TMPKRAV*PSLHSKLSSRDQAKYPATRAP 463
Score = 30.4 bits (60), Expect = 3.7
Identities = 12/24 (50%), Positives = 18/24 (75%)
Frame = -2 / +3
Query: 92 RQCHNVR*SRQTIQSCPAETKRSS 21
R+C N + SR + +SC AETK+S+
Sbjct: 375 RRCRNGQCSRVSTRSCQAETKQST 446
>gb|BM441741.2|BM441741 EBed07_SQ001_G19_R endosperm, 28 DPA, no treatment, cv Optic,
EBed07 Hordeum vulgare subsp. vulgare cDNA clone
EBed07_SQ001_G19 5', mRNA sequence
Length = 511
Score = 67.5 bits (141), Expect = 3e-011
Identities = 25/34 (73%), Positives = 28/34 (82%)
Frame = +2 / +2
Query: 5 GSNVQGYFAWSLLDNFEWFAGFTERYGIVYVDRN 106
G+ V GYFAWSLLDNFEW G+T R+GIVYVD N
Sbjct: 47 GARVAGYFAWSLLDNFEWRLGYTARFGIVYVDFN 148
Score = 51.0 bits (105), Expect = 2e-006
Identities = 24/35 (68%), Positives = 28/35 (80%)
Frame = -1 / -2
Query: 108 LLRST*TMP*RSVKPANHSKLSSRDQAK*PCTFDP 4
+L+ST*TMP R+V P+ HSKLSSRDQAK P T P
Sbjct: 150 VLKST*TMPKRAV*PSLHSKLSSRDQAKYPATRAP 46
Score = 30.4 bits (60), Expect = 3.7
Identities = 12/24 (50%), Positives = 18/24 (75%)
Frame = -2 / -3
Query: 92 RQCHNVR*SRQTIQSCPAETKRSS 21
R+C N + SR + +SC AETK+S+
Sbjct: 134 RRCRNGQCSRVSTRSCQAETKQST 63
>gb|BQ755347.1|BQ755347 EBed07_SQ002_J07_R endosperm, 28 DPA, no treatment, cv Optic,
EBed07 Hordeum vulgare subsp. vulgare cDNA clone
EBed07_SQ002_J07 5', mRNA sequence
Length = 642
Score = 67.5 bits (141), Expect = 3e-011
Identities = 25/34 (73%), Positives = 28/34 (82%)
Frame = +2 / +3
Query: 5 GSNVQGYFAWSLLDNFEWFAGFTERYGIVYVDRN 106
G+ V GYFAWSLLDNFEW G+T R+GIVYVD N
Sbjct: 393 GARVAGYFAWSLLDNFEWRLGYTARFGIVYVDFN 494
Score = 51.0 bits (105), Expect = 2e-006
Identities = 24/35 (68%), Positives = 28/35 (80%)
Frame = -1 / -3
Query: 108 LLRST*TMP*RSVKPANHSKLSSRDQAK*PCTFDP 4
+L+ST*TMP R+V P+ HSKLSSRDQAK P T P
Sbjct: 496 VLKST*TMPKRAV*PSLHSKLSSRDQAKYPATRAP 392
Score = 30.4 bits (60), Expect = 3.7
Identities = 12/24 (50%), Positives = 18/24 (75%)
Frame = -2 / -1
Query: 92 RQCHNVR*SRQTIQSCPAETKRSS 21
R+C N + SR + +SC AETK+S+
Sbjct: 480 RRCRNGQCSRVSTRSCQAETKQST 409
>gb|BU976211.1|BU976211 HA03F10u HA Hordeum vulgare subsp. vulgare cDNA clone HA03F10
3-PRIME, mRNA sequence
Length = 565
Score = 67.5 bits (141), Expect = 3e-011
Identities = 25/34 (73%), Positives = 28/34 (82%)
Frame = +2 / -3
Query: 5 GSNVQGYFAWSLLDNFEWFAGFTERYGIVYVDRN 106
G+ V GYFAWSLLDNFEW G+T R+GIVYVD N
Sbjct: 452 GARVAGYFAWSLLDNFEWRLGYTARFGIVYVDFN 351
Score = 51.0 bits (105), Expect = 2e-006
Identities = 24/35 (68%), Positives = 28/35 (80%)
Frame = -1 / +1
Query: 108 LLRST*TMP*RSVKPANHSKLSSRDQAK*PCTFDP 4
+L+ST*TMP R+V P+ HSKLSSRDQAK P T P
Sbjct: 349 VLKST*TMPKRAV*PSLHSKLSSRDQAKYPATRAP 453
Score = 30.4 bits (60), Expect = 3.7
Identities = 12/24 (50%), Positives = 18/24 (75%)
Frame = -2 / +2
Query: 92 RQCHNVR*SRQTIQSCPAETKRSS 21
R+C N + SR + +SC AETK+S+
Sbjct: 365 RRCRNGQCSRVSTRSCQAETKQST 436
>gb|BU984559.1|BU984559 HF04E16r HF Hordeum vulgare subsp. vulgare cDNA clone HF04E16
5-PRIME, mRNA sequence
Length = 590
Score = 67.5 bits (141), Expect = 3e-011
Identities = 25/34 (73%), Positives = 28/34 (82%)
Frame = +2 / +2
Query: 5 GSNVQGYFAWSLLDNFEWFAGFTERYGIVYVDRN 106
G+ V GYFAWSLLDNFEW G+T R+GIVYVD N
Sbjct: 359 GARVAGYFAWSLLDNFEWRLGYTARFGIVYVDFN 460
Score = 51.0 bits (105), Expect = 2e-006
Identities = 24/35 (68%), Positives = 28/35 (80%)
Frame = -1 / -3
Query: 108 LLRST*TMP*RSVKPANHSKLSSRDQAK*PCTFDP 4
+L+ST*TMP R+V P+ HSKLSSRDQAK P T P
Sbjct: 462 VLKST*TMPKRAV*PSLHSKLSSRDQAKYPATRAP 358
Score = 30.4 bits (60), Expect = 3.7
Identities = 12/24 (50%), Positives = 18/24 (75%)
Frame = -2 / -1
Query: 92 RQCHNVR*SRQTIQSCPAETKRSS 21
R+C N + SR + +SC AETK+S+
Sbjct: 446 RRCRNGQCSRVSTRSCQAETKQST 375
>gb|BU986792.1|BU986792 HF12O16r HF Hordeum vulgare subsp. vulgare cDNA clone HF12O16
5-PRIME, mRNA sequence
Length = 615
Score = 67.5 bits (141), Expect = 3e-011
Identities = 25/34 (73%), Positives = 28/34 (82%)
Frame = +2 / +1
Query: 5 GSNVQGYFAWSLLDNFEWFAGFTERYGIVYVDRN 106
G+ V GYFAWSLLDNFEW G+T R+GIVYVD N
Sbjct: 403 GARVAGYFAWSLLDNFEWRLGYTARFGIVYVDFN 504
Score = 51.0 bits (105), Expect = 2e-006
Identities = 24/35 (68%), Positives = 28/35 (80%)
Frame = -1 / -2
Query: 108 LLRST*TMP*RSVKPANHSKLSSRDQAK*PCTFDP 4
+L+ST*TMP R+V P+ HSKLSSRDQAK P T P
Sbjct: 506 VLKST*TMPKRAV*PSLHSKLSSRDQAKYPATRAP 402
Score = 30.4 bits (60), Expect = 3.7
Identities = 12/24 (50%), Positives = 18/24 (75%)
Frame = -2 / -3
Query: 92 RQCHNVR*SRQTIQSCPAETKRSS 21
R+C N + SR + +SC AETK+S+
Sbjct: 490 RRCRNGQCSRVSTRSCQAETKQST 419
>gb|CA010249.1|CA010249 HT11B14u HT Hordeum vulgare subsp. vulgare cDNA clone HT11B14
3-PRIME, mRNA sequence
Length = 579
Score = 67.5 bits (141), Expect = 3e-011
Identities = 25/34 (73%), Positives = 28/34 (82%)
Frame = +2 / -1
Query: 5 GSNVQGYFAWSLLDNFEWFAGFTERYGIVYVDRN 106
G+ V GYFAWSLLDNFEW G+T R+GIVYVD N
Sbjct: 462 GARVAGYFAWSLLDNFEWRLGYTARFGIVYVDFN 361
Score = 51.0 bits (105), Expect = 2e-006
Identities = 24/35 (68%), Positives = 28/35 (80%)
Frame = -1 / +2
Query: 108 LLRST*TMP*RSVKPANHSKLSSRDQAK*PCTFDP 4
+L+ST*TMP R+V P+ HSKLSSRDQAK P T P
Sbjct: 359 VLKST*TMPKRAV*PSLHSKLSSRDQAKYPATRAP 463
Score = 30.4 bits (60), Expect = 3.7
Identities = 12/24 (50%), Positives = 18/24 (75%)
Frame = -2 / +3
Query: 92 RQCHNVR*SRQTIQSCPAETKRSS 21
R+C N + SR + +SC AETK+S+
Sbjct: 375 RRCRNGQCSRVSTRSCQAETKQST 446
>gb|CK124362.1|CK124362 BES1824108i03 BES1824 Hordeum vulgare subsp. vulgare cDNA clone
MPMGp2010I038 5-PRIME, mRNA sequence
Length = 655
Score = 67.5 bits (141), Expect = 3e-011
Identities = 25/34 (73%), Positives = 28/34 (82%)
Frame = +2 / +1
Query: 5 GSNVQGYFAWSLLDNFEWFAGFTERYGIVYVDRN 106
G+ V GYFAWSLLDNFEW G+T R+GIVYVD N
Sbjct: 328 GARVAGYFAWSLLDNFEWRLGYTARFGIVYVDFN 429
Score = 51.0 bits (105), Expect = 2e-006
Identities = 24/35 (68%), Positives = 28/35 (80%)
Frame = -1 / -3
Query: 108 LLRST*TMP*RSVKPANHSKLSSRDQAK*PCTFDP 4
+L+ST*TMP R+V P+ HSKLSSRDQAK P T P
Sbjct: 431 VLKST*TMPKRAV*PSLHSKLSSRDQAKYPATRAP 327
Score = 30.4 bits (60), Expect = 3.7
Identities = 12/24 (50%), Positives = 18/24 (75%)
Frame = -2 / -1
Query: 92 RQCHNVR*SRQTIQSCPAETKRSS 21
R+C N + SR + +SC AETK+S+
Sbjct: 415 RRCRNGQCSRVSTRSCQAETKQST 344
>gb|CV053661.1|CV053661 BNEL101g2 Barley EST endosperm library Hordeum vulgare subsp.
vulgare cDNA clone BNEL101g2 5' similar to
beta-glucosidase BGQ60 precursor - barley, mRNA sequence
Length = 617
Score = 67.0 bits (140), Expect = 3e-011
Identities = 25/34 (73%), Positives = 28/34 (82%)
Frame = +2 / +3
Query: 5 GSNVQGYFAWSLLDNFEWFAGFTERYGIVYVDRN 106
G+ V GYFAWSLLDNFEW G+T R+GIVYVD N
Sbjct: 165 GARVVGYFAWSLLDNFEWRLGYTARFGIVYVDFN 266
Score = 50.6 bits (104), Expect = 3e-006
Identities = 24/35 (68%), Positives = 28/35 (80%)
Frame = -1 / -2
Query: 108 LLRST*TMP*RSVKPANHSKLSSRDQAK*PCTFDP 4
+L+ST*TMP R+V P+ HSKLSSRDQAK P T P
Sbjct: 268 VLKST*TMPKRAV*PSLHSKLSSRDQAKYPTTRAP 164
Score = 29.0 bits (57), Expect = 9.7
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = -2 / -3
Query: 92 RQCHNVR*SRQTIQSCPAETKRSS 21
++C N + SR + +SC AETK+S+
Sbjct: 252 KRCQNGQCSRVSTRSCQAETKQST 181
>gb|AV920097.1|AV920097 AV920097 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags9e05 3', mRNA sequence
Length = 372
Score = 66.6 bits (139), Expect = 5e-011
Identities = 23/35 (65%), Positives = 30/35 (85%)
Frame = +2 / -2
Query: 5 GSNVQGYFAWSLLDNFEWFAGFTERYGIVYVDRNN 109
G+NV GY AWSLLDNFEW +G++ ++GIVYVD N+
Sbjct: 263 GANVLGYXAWSLLDNFEWMSGYSSKFGIVYVDFNS 159
Score = 40.0 bits (81), Expect = 0.005
Identities = 21/35 (60%), Positives = 22/35 (62%)
Frame = -1 / +1
Query: 108 LLRST*TMP*RSVKPANHSKLSSRDQAK*PCTFDP 4
LL+ST TMP P HSKLS RD AK*P T P
Sbjct: 160 LLKSTYTMPNLDE*PDIHSKLSRRDHAK*PRTLAP 264
>gb|BM100114.2|BM100114 EBma01_SQ001_D19_R maternal, 4 DPA, no treatment, cv Optic, EBma01
Hordeum vulgare subsp. vulgare cDNA clone
EBma01_SQ001_D19 5', mRNA sequence
Length = 480
Score = 66.6 bits (139), Expect = 5e-011
Identities = 23/35 (65%), Positives = 30/35 (85%)
Frame = +2 / +1
Query: 5 GSNVQGYFAWSLLDNFEWFAGFTERYGIVYVDRNN 109
G+NV GYFAWSLL NFEW +G++ ++GIVYVD N+
Sbjct: 373 GANVLGYFAWSLLXNFEWMSGYSSKFGIVYVDFNS 477
Score = 40.5 bits (82), Expect = 0.003
Identities = 21/35 (60%), Positives = 22/35 (62%)
Frame = -1 / -2
Query: 108 LLRST*TMP*RSVKPANHSKLSSRDQAK*PCTFDP 4
LL+ST*TMP P HSKL RD AK*P T P
Sbjct: 476 LLKST*TMPNLDE*PDIHSKLXRRDHAK*PRTLAP 372
Score = 34.1 bits (68), Expect = 0.29
Identities = 15/29 (51%), Positives = 17/29 (58%)
Frame = -2 / -3
Query: 107 CCGRRRQCHNVR*SRQTIQSCPAETKRSS 21
C RRR+C SR + QSC ET RSS
Sbjct: 475 C*SRRRRCRTWTSSRTSTQSCXGETTRSS 389
Score = 29.9 bits (59), Expect = 5.1
Identities = 17/31 (54%), Positives = 21/31 (67%)
Frame = +1 / +3
Query: 16 ARLLRLVSAGQL*MVCRLHRTLWHCLRRPQQ 108
+RLLR+VS QL*+ RL + H LRR QQ
Sbjct: 384 SRLLRVVSPXQL*VDVRLLVQVRHRLRRLQQ 476
Score = 29.5 bits (58), Expect = 7.0
Identities = 11/19 (57%), Positives = 15/19 (78%)
Frame = -3 / -1
Query: 67 AGKPFKVVQQRPSEVALHI 11
AG P KVV++RP EVA ++
Sbjct: 435 AGHPLKVVEERPREVAENV 379
>gb|BG344496.1|BG344496 HVSMEg0009H02f Hordeum vulgare pre-anthesis spike EST library
HVcDNA0008 (white to yellow anther) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEg0009H02f, mRNA sequence
Length = 793
Score = 66.1 bits (138), Expect = 6e-011
Identities = 23/35 (65%), Positives = 30/35 (85%)
Frame = +2 / -1
Query: 5 GSNVQGYFAWSLLDNFEWFAGFTERYGIVYVDRNN 109
G+NV GYFAWSLLDNFEW +G++ ++GIV VD N+
Sbjct: 349 GANVLGYFAWSLLDNFEWMSGYSSKFGIVXVDFNS 245
Score = 42.3 bits (86), Expect = 0.001
Identities = 22/35 (62%), Positives = 23/35 (65%)
Frame = -1 / +3
Query: 108 LLRST*TMP*RSVKPANHSKLSSRDQAK*PCTFDP 4
LL+ST*TMP P HSKLS RD AK*P T P
Sbjct: 246 LLKST*TMPNLDE*PDIHSKLSRRDHAK*PRTLAP 350
Score = 29.5 bits (58), Expect = 7.0
Identities = 11/19 (57%), Positives = 15/19 (78%)
Frame = -3 / +2
Query: 67 AGKPFKVVQQRPSEVALHI 11
AG P KVV++RP EVA ++
Sbjct: 287 AGHPLKVVEERPREVAENV 343
>gb|BE193330.2|BE193330 HVSMEh0080J19f Hordeum vulgare 5-45 DAP spike EST library
HVcDNA0009 (5 to 45 DAP) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEh0080J19f, mRNA sequence
Length = 682
Score = 66.1 bits (138), Expect = 6e-011
Identities = 25/34 (73%), Positives = 28/34 (82%)
Frame = +2 / +2
Query: 5 GSNVQGYFAWSLLDNFEWFAGFTERYGIVYVDRN 106
G+ V GYFAWSLLDNFEW G+T R+GIVYVD N
Sbjct: 299 GARVAGYFAWSLLDNFEWRLGYTCRFGIVYVDFN 400
Score = 50.6 bits (104), Expect = 3e-006
Identities = 24/35 (68%), Positives = 27/35 (77%)
Frame = -1 / -2
Query: 108 LLRST*TMP*RSVKPANHSKLSSRDQAK*PCTFDP 4
+L+ST*TMP R V P+ HSKLSSRDQAK P T P
Sbjct: 402 VLKST*TMPKRQV*PSLHSKLSSRDQAKYPATRAP 298
Score = 30.9 bits (61), Expect = 2.7
Identities = 12/24 (50%), Positives = 18/24 (75%)
Frame = -2 / -3
Query: 92 RQCHNVR*SRQTIQSCPAETKRSS 21
R+C N + SR + +SC AETK+S+
Sbjct: 386 RRCRNGKCSRVSTRSCQAETKQST 315
>gb|BJ467618.1|BJ467618 BJ467618 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags29b06 3', mRNA sequence
Length = 709
Score = 65.2 bits (136), Expect = 1e-010
Identities = 24/32 (75%), Positives = 27/32 (84%)
Frame = +2 / -2
Query: 5 GSNVQGYFAWSLLDNFEWFAGFTERYGIVYVD 100
G+ V GYFAWSLLDNFEW G+T R+GIVYVD
Sbjct: 306 GARVIGYFAWSLLDNFEWRLGYTARFGIVYVD 211
Score = 46.0 bits (94), Expect(2) = 7e-005
Identities = 23/35 (65%), Positives = 27/35 (77%)
Frame = -1 / +2
Query: 108 LLRST*TMP*RSVKPANHSKLSSRDQAK*PCTFDP 4
+L ST*T+P R+V P+ HSKLSSRDQAK P T P
Sbjct: 203 VL*ST*TIPKRAV*PSLHSKLSSRDQAKYPITRAP 307
Score = 17.6 bits (32), Expect(2) = 7e-005
Identities = 7/14 (50%), Positives = 9/14 (64%)
Frame = -1 / +2
Query: 171 FFAVLNSFNHLADS 130
FF+V NH A+S
Sbjct: 143 FFSVSMFLNHNAES 184
>gb|BJ473760.1|BJ473760 BJ473760 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal16n11 3', mRNA sequence
Length = 764
Score = 64.3 bits (134), Expect = 2e-010
Identities = 22/32 (68%), Positives = 27/32 (84%)
Frame = +2 / -3
Query: 5 GSNVQGYFAWSLLDNFEWFAGFTERYGIVYVD 100
G+NV+GYF WSL+DNFEW GFT R+G+ YVD
Sbjct: 432 GANVRGYFVWSLMDNFEWGFGFTVRFGLYYVD 337
Score = 37.3 bits (75), Expect = 0.032
Identities = 19/33 (57%), Positives = 21/33 (63%)
Frame = -1 / +2
Query: 102 RST*TMP*RSVKPANHSKLSSRDQAK*PCTFDP 4
+ST* P +VKP HSKLS R K*P TF P
Sbjct: 335 KST*YSPNLTVKPKPHSKLSMRLHTK*PRTFAP 433
Score = 34.1 bits (68), Expect = 0.29
Identities = 13/23 (56%), Positives = 16/23 (69%)
Frame = +3 / -1
Query: 6 DQMCKATSLGLCWTTLNGLPASP 74
+Q C ATS G WTT +G+ ASP
Sbjct: 431 EQTCVATSCGASWTTSSGVLASP 363
Score = 29.5 bits (58), Expect = 7.0
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = -3 / +1
Query: 73 GEAGKPFKVVQQRPSEVALHI 11
GEA P +VV + P EVA H+
Sbjct: 364 GEAKTPLEVVHEAPHEVATHV 426
>gb|BJ474408.1|BJ474408 BJ474408 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal13k12 3', mRNA sequence
Length = 769
Score = 64.3 bits (134), Expect = 2e-010
Identities = 22/32 (68%), Positives = 27/32 (84%)
Frame = +2 / -3
Query: 5 GSNVQGYFAWSLLDNFEWFAGFTERYGIVYVD 100
G+NV+GYF WSL+DNFEW GFT R+G+ YVD
Sbjct: 434 GANVRGYFVWSLMDNFEWGFGFTVRFGLYYVD 339
Score = 37.3 bits (75), Expect = 0.032
Identities = 19/33 (57%), Positives = 21/33 (63%)
Frame = -1 / +1
Query: 102 RST*TMP*RSVKPANHSKLSSRDQAK*PCTFDP 4
+ST* P +VKP HSKLS R K*P TF P
Sbjct: 337 KST*YSPNLTVKPKPHSKLSMRLHTK*PRTFAP 435
Score = 34.1 bits (68), Expect = 0.29
Identities = 13/23 (56%), Positives = 16/23 (69%)
Frame = +3 / -1
Query: 6 DQMCKATSLGLCWTTLNGLPASP 74
+Q C ATS G WTT +G+ ASP
Sbjct: 433 EQTCVATSCGASWTTSSGVLASP 365
Score = 29.5 bits (58), Expect = 7.0
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = -3 / +3
Query: 73 GEAGKPFKVVQQRPSEVALHI 11
GEA P +VV + P EVA H+
Sbjct: 366 GEAKTPLEVVHEAPHEVATHV 428
>gb|BE601810.2|BE601810 HVSMEh0099K03f Hordeum vulgare 5-45 DAP spike EST library
HVcDNA0009 (5 to 45 DAP) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEh0099K03f, mRNA sequence
Length = 499
Score = 64.3 bits (134), Expect = 2e-010
Identities = 24/34 (70%), Positives = 27/34 (79%)
Frame = +2 / +3
Query: 5 GSNVQGYFAWSLLDNFEWFAGFTERYGIVYVDRN 106
G+ V GYFAWSLLDNFEW G+T R+GI YVD N
Sbjct: 300 GARVAGYFAWSLLDNFEWRLGYTARFGIDYVDFN 401
Score = 49.2 bits (101), Expect = 8e-006
Identities = 23/35 (65%), Positives = 28/35 (80%)
Frame = -1 / -1
Query: 108 LLRST*TMP*RSVKPANHSKLSSRDQAK*PCTFDP 4
+L+ST*+MP R+V P+ HSKLSSRDQAK P T P
Sbjct: 403 VLKST*SMPKRAV*PSLHSKLSSRDQAKYPATRAP 299
>gb|AV936469.1|AV936469 AV936469 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal11g17 3', mRNA sequence
Length = 709
Score = 64.3 bits (134), Expect = 2e-010
Identities = 22/32 (68%), Positives = 27/32 (84%)
Frame = +2 / -1
Query: 5 GSNVQGYFAWSLLDNFEWFAGFTERYGIVYVD 100
G+NV+GYF WSL+DNFEW GFT R+G+ YVD
Sbjct: 433 GANVRGYFVWSLMDNFEWGFGFTVRFGLYYVD 338
Score = 37.3 bits (75), Expect = 0.032
Identities = 19/33 (57%), Positives = 21/33 (63%)
Frame = -1 / +3
Query: 102 RST*TMP*RSVKPANHSKLSSRDQAK*PCTFDP 4
+ST* P +VKP HSKLS R K*P TF P
Sbjct: 336 KST*YSPNLTVKPKPHSKLSMRLHTK*PRTFAP 434
Score = 34.1 bits (68), Expect = 0.29
Identities = 13/23 (56%), Positives = 16/23 (69%)
Frame = +3 / -2
Query: 6 DQMCKATSLGLCWTTLNGLPASP 74
+Q C ATS G WTT +G+ ASP
Sbjct: 432 EQTCVATSCGASWTTSSGVLASP 364
Score = 29.5 bits (58), Expect = 7.0
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = -3 / +2
Query: 73 GEAGKPFKVVQQRPSEVALHI 11
GEA P +VV + P EVA H+
Sbjct: 365 GEAKTPLEVVHEAPHEVATHV 427
>gb|BJ463709.1|BJ463709 BJ463709 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags30c23 5', mRNA sequence
Length = 688
Score = 64.3 bits (134), Expect = 2e-010
Identities = 22/32 (68%), Positives = 27/32 (84%)
Frame = +2 / +2
Query: 5 GSNVQGYFAWSLLDNFEWFAGFTERYGIVYVD 100
G+NV+GYF WSL+DNFEW GFT R+G+ YVD
Sbjct: 482 GANVRGYFVWSLMDNFEWGFGFTVRFGLYYVD 577
Score = 37.3 bits (75), Expect = 0.032
Identities = 19/33 (57%), Positives = 21/33 (63%)
Frame = -1 / -2
Query: 102 RST*TMP*RSVKPANHSKLSSRDQAK*PCTFDP 4
+ST* P +VKP HSKLS R K*P TF P
Sbjct: 579 KST*YSPNLTVKPKPHSKLSMRLHTK*PRTFAP 481
Score = 34.1 bits (68), Expect = 0.29
Identities = 13/23 (56%), Positives = 16/23 (69%)
Frame = +3 / +3
Query: 6 DQMCKATSLGLCWTTLNGLPASP 74
+Q C ATS G WTT +G+ ASP
Sbjct: 483 EQTCVATSCGASWTTSSGVLASP 551
Score = 29.5 bits (58), Expect = 7.0
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = -3 / -1
Query: 73 GEAGKPFKVVQQRPSEVALHI 11
GEA P +VV + P EVA H+
Sbjct: 550 GEAKTPLEVVHEAPHEVATHV 488
>gb|BJ467881.1|BJ467881 BJ467881 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags30c23 3', mRNA sequence
Length = 670
Score = 64.3 bits (134), Expect = 2e-010
Identities = 22/32 (68%), Positives = 27/32 (84%)
Frame = +2 / -1
Query: 5 GSNVQGYFAWSLLDNFEWFAGFTERYGIVYVD 100
G+NV+GYF WSL+DNFEW GFT R+G+ YVD
Sbjct: 451 GANVRGYFVWSLMDNFEWGFGFTVRFGLYYVD 356
Score = 37.3 bits (75), Expect = 0.032
Identities = 19/33 (57%), Positives = 21/33 (63%)
Frame = -1 / +3
Query: 102 RST*TMP*RSVKPANHSKLSSRDQAK*PCTFDP 4
+ST* P +VKP HSKLS R K*P TF P
Sbjct: 354 KST*YSPNLTVKPKPHSKLSMRLHTK*PRTFAP 452
Score = 34.1 bits (68), Expect = 0.29
Identities = 13/23 (56%), Positives = 16/23 (69%)
Frame = +3 / -2
Query: 6 DQMCKATSLGLCWTTLNGLPASP 74
+Q C ATS G WTT +G+ ASP
Sbjct: 450 EQTCVATSCGASWTTSSGVLASP 382
Score = 29.5 bits (58), Expect = 7.0
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = -3 / +2
Query: 73 GEAGKPFKVVQQRPSEVALHI 11
GEA P +VV + P EVA H+
Sbjct: 383 GEAKTPLEVVHEAPHEVATHV 445
>gb|BJ475687.1|BJ475687 BJ475687 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal29i07 3', mRNA sequence
Length = 645
Score = 64.3 bits (134), Expect = 2e-010
Identities = 22/32 (68%), Positives = 27/32 (84%)
Frame = +2 / -1
Query: 5 GSNVQGYFAWSLLDNFEWFAGFTERYGIVYVD 100
G+NV+GYF WSL+DNFEW GFT R+G+ YVD
Sbjct: 408 GANVRGYFVWSLMDNFEWGFGFTVRFGLYYVD 313
Score = 37.3 bits (75), Expect = 0.032
Identities = 19/33 (57%), Positives = 21/33 (63%)
Frame = -1 / +2
Query: 102 RST*TMP*RSVKPANHSKLSSRDQAK*PCTFDP 4
+ST* P +VKP HSKLS R K*P TF P
Sbjct: 311 KST*YXPNLTVKPKPHSKLSMRLHTK*PRTFAP 409
Score = 34.1 bits (68), Expect = 0.29
Identities = 13/23 (56%), Positives = 16/23 (69%)
Frame = +3 / -2
Query: 6 DQMCKATSLGLCWTTLNGLPASP 74
+Q C ATS G WTT +G+ ASP
Sbjct: 407 EQTCVATSCGASWTTSSGVLASP 339
Score = 29.5 bits (58), Expect = 7.0
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = -3 / +1
Query: 73 GEAGKPFKVVQQRPSEVALHI 11
GEA P +VV + P EVA H+
Sbjct: 340 GEAKTPLEVVHEAPHEVATHV 402
>gb|BQ468777.1|BQ468777 HM02F02r HM Hordeum vulgare subsp. vulgare cDNA clone HM02F02
5-PRIME, mRNA sequence
Length = 553
Score = 64.3 bits (134), Expect = 2e-010
Identities = 22/32 (68%), Positives = 27/32 (84%)
Frame = +2 / +1
Query: 5 GSNVQGYFAWSLLDNFEWFAGFTERYGIVYVD 100
G+NV+GYF WSL+DNFEW GFT R+G+ YVD
Sbjct: 382 GANVRGYFVWSLMDNFEWGFGFTVRFGLYYVD 477
Score = 37.3 bits (75), Expect = 0.032
Identities = 19/33 (57%), Positives = 21/33 (63%)
Frame = -1 / -3
Query: 102 RST*TMP*RSVKPANHSKLSSRDQAK*PCTFDP 4
+ST* P +VKP HSKLS R K*P TF P
Sbjct: 479 KST*YSPNLTVKPKPHSKLSMRLHTK*PRTFAP 381
Score = 34.1 bits (68), Expect = 0.29
Identities = 13/23 (56%), Positives = 16/23 (69%)
Frame = +3 / +2
Query: 6 DQMCKATSLGLCWTTLNGLPASP 74
+Q C ATS G WTT +G+ ASP
Sbjct: 383 EQTCVATSCGASWTTSSGVLASP 451
Score = 29.5 bits (58), Expect = 7.0
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = -3 / -2
Query: 73 GEAGKPFKVVQQRPSEVALHI 11
GEA P +VV + P EVA H+
Sbjct: 450 GEAKTPLEVVHEAPHEVATHV 388
>gb|BQ134683.1|BQ134683 LP30159 Lemma/palea-enriched cDNA library from dough stage of
kernel Hordeum vulgare subsp. vulgare cDNA clone 3-159
similar to putative ABC transporter, mRNA sequence
Length = 339
Score = 64.3 bits (134), Expect = 2e-010
Identities = 22/32 (68%), Positives = 27/32 (84%)
Frame = +2 / +2
Query: 5 GSNVQGYFAWSLLDNFEWFAGFTERYGIVYVD 100
G+NV+GYF WSL+DNFEW GFT R+G+ YVD
Sbjct: 125 GANVRGYFVWSLMDNFEWGFGFTVRFGLYYVD 220
Score = 37.3 bits (75), Expect = 0.032
Identities = 19/33 (57%), Positives = 21/33 (63%)
Frame = -1 / -1
Query: 102 RST*TMP*RSVKPANHSKLSSRDQAK*PCTFDP 4
+ST* P +VKP HSKLS R K*P TF P
Sbjct: 222 KST*YSPNLTVKPKPHSKLSMRLHTK*PRTFAP 124
Score = 34.1 bits (68), Expect = 0.29
Identities = 13/23 (56%), Positives = 16/23 (69%)
Frame = +3 / +3
Query: 6 DQMCKATSLGLCWTTLNGLPASP 74
+Q C ATS G WTT +G+ ASP
Sbjct: 126 EQTCVATSCGASWTTSSGVLASP 194
Score = 29.5 bits (58), Expect = 7.0
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = -3 / -3
Query: 73 GEAGKPFKVVQQRPSEVALHI 11
GEA P +VV + P EVA H+
Sbjct: 193 GEAKTPLEVVHEAPHEVATHV 131
>gb|BU995809.1|BU995809 HM11G24r HM Hordeum vulgare subsp. vulgare cDNA clone HM11G24
5-PRIME, mRNA sequence
Length = 630
Score = 64.3 bits (134), Expect = 2e-010
Identities = 22/32 (68%), Positives = 27/32 (84%)
Frame = +2 / +2
Query: 5 GSNVQGYFAWSLLDNFEWFAGFTERYGIVYVD 100
G+NV+GYF WSL+DNFEW GFT R+G+ YVD
Sbjct: 377 GANVRGYFVWSLMDNFEWGFGFTVRFGLYYVD 472
Score = 37.3 bits (75), Expect = 0.032
Identities = 19/33 (57%), Positives = 21/33 (63%)
Frame = -1 / -1
Query: 102 RST*TMP*RSVKPANHSKLSSRDQAK*PCTFDP 4
+ST* P +VKP HSKLS R K*P TF P
Sbjct: 474 KST*YSPNLTVKPKPHSKLSMRLHTK*PRTFAP 376
Score = 34.1 bits (68), Expect = 0.29
Identities = 13/23 (56%), Positives = 16/23 (69%)
Frame = +3 / +3
Query: 6 DQMCKATSLGLCWTTLNGLPASP 74
+Q C ATS G WTT +G+ ASP
Sbjct: 378 EQTCVATSCGASWTTSSGVLASP 446
Score = 29.5 bits (58), Expect = 7.0
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = -3 / -3
Query: 73 GEAGKPFKVVQQRPSEVALHI 11
GEA P +VV + P EVA H+
Sbjct: 445 GEAKTPLEVVHEAPHEVATHV 383
>gb|CA018105.1|CA018105 HV07H15r HV Hordeum vulgare subsp. vulgare cDNA clone HV07H15
5-PRIME, mRNA sequence
Length = 504
Score = 64.3 bits (134), Expect = 2e-010
Identities = 22/32 (68%), Positives = 27/32 (84%)
Frame = +2 / +1
Query: 5 GSNVQGYFAWSLLDNFEWFAGFTERYGIVYVD 100
G+NV+GYF WSL+DNFEW GFT R+G+ YVD
Sbjct: 277 GANVRGYFVWSLMDNFEWGFGFTVRFGLYYVD 372
Score = 37.3 bits (75), Expect = 0.032
Identities = 19/33 (57%), Positives = 21/33 (63%)
Frame = -1 / -2
Query: 102 RST*TMP*RSVKPANHSKLSSRDQAK*PCTFDP 4
+ST* P +VKP HSKLS R K*P TF P
Sbjct: 374 KST*YSPNLTVKPKPHSKLSMRLHTK*PRTFAP 276
Score = 34.1 bits (68), Expect = 0.29
Identities = 13/23 (56%), Positives = 16/23 (69%)
Frame = +3 / +2
Query: 6 DQMCKATSLGLCWTTLNGLPASP 74
+Q C ATS G WTT +G+ ASP
Sbjct: 278 EQTCVATSCGASWTTSSGVLASP 346
Score = 29.5 bits (58), Expect = 7.0
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = -3 / -1
Query: 73 GEAGKPFKVVQQRPSEVALHI 11
GEA P +VV + P EVA H+
Sbjct: 345 GEAKTPLEVVHEAPHEVATHV 283
>gb|CB881964.1|CB881964 HM11G24w HM Hordeum vulgare subsp. vulgare cDNA clone HM11G24
3-PRIME, mRNA sequence
Length = 653
Score = 64.3 bits (134), Expect = 2e-010
Identities = 22/32 (68%), Positives = 27/32 (84%)
Frame = +2 / -3
Query: 5 GSNVQGYFAWSLLDNFEWFAGFTERYGIVYVD 100
G+NV+GYF WSL+DNFEW GFT R+G+ YVD
Sbjct: 462 GANVRGYFVWSLMDNFEWGFGFTVRFGLYYVD 367
Score = 37.3 bits (75), Expect = 0.032
Identities = 19/33 (57%), Positives = 21/33 (63%)
Frame = -1 / +2
Query: 102 RST*TMP*RSVKPANHSKLSSRDQAK*PCTFDP 4
+ST* P +VKP HSKLS R K*P TF P
Sbjct: 365 KST*YSPNLTVKPKPHSKLSMRLHTK*PRTFAP 463
Score = 34.1 bits (68), Expect = 0.29
Identities = 13/23 (56%), Positives = 16/23 (69%)
Frame = +3 / -1
Query: 6 DQMCKATSLGLCWTTLNGLPASP 74
+Q C ATS G WTT +G+ ASP
Sbjct: 461 EQTCVATSCGASWTTSSGVLASP 393
Score = 29.5 bits (58), Expect = 7.0
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = -3 / +1
Query: 73 GEAGKPFKVVQQRPSEVALHI 11
GEA P +VV + P EVA H+
Sbjct: 394 GEAKTPLEVVHEAPHEVATHV 456
>gb|BE454083.2|BE454083 HVSMEh0080E16f Hordeum vulgare 5-45 DAP spike EST library
HVcDNA0009 (5 to 45 DAP) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEh0080E16f, mRNA sequence
Length = 713
Score = 63.4 bits (132), Expect = 4e-010
Identities = 23/31 (74%), Positives = 26/31 (83%)
Frame = +2 / +2
Query: 5 GSNVQGYFAWSLLDNFEWFAGFTERYGIVYV 97
G+ V GYFAWSLLDNFEW G+T R+GIVYV
Sbjct: 227 GARVAGYFAWSLLDNFEWRLGYTARFGIVYV 319
Score = 48.3 bits (99), Expect = 2e-005
Identities = 23/35 (65%), Positives = 27/35 (77%)
Frame = -1 / -3
Query: 108 LLRST*TMP*RSVKPANHSKLSSRDQAK*PCTFDP 4
+L+ T*TMP R+V P+ HSKLSSRDQAK P T P
Sbjct: 330 VLKYT*TMPKRAV*PSLHSKLSSRDQAKYPATRAP 226
Score = 30.4 bits (60), Expect = 3.7
Identities = 12/24 (50%), Positives = 18/24 (75%)
Frame = -2 / -1
Query: 92 RQCHNVR*SRQTIQSCPAETKRSS 21
R+C N + SR + +SC AETK+S+
Sbjct: 314 RRCRNGQCSRVSTRSCQAETKQST 243
>gb|BM441944.2|BM441944 EBed07_SQ001_P23_R endosperm, 28 DPA, no treatment, cv Optic,
EBed07 Hordeum vulgare subsp. vulgare cDNA clone
EBed07_SQ001_P23 5', mRNA sequence
Length = 449
Score = 62.9 bits (131), Expect = 6e-010
Identities = 23/29 (79%), Positives = 25/29 (86%)
Frame = +2 / +2
Query: 20 GYFAWSLLDNFEWFAGFTERYGIVYVDRN 106
GYFAWSLLDNFEW G+T R+GIVYVD N
Sbjct: 5 GYFAWSLLDNFEWRLGYTARFGIVYVDFN 91
Score = 47.8 bits (98), Expect = 2e-005
Identities = 22/30 (73%), Positives = 26/30 (86%)
Frame = -1 / -3
Query: 108 LLRST*TMP*RSVKPANHSKLSSRDQAK*P 19
+L+ST*TMP R+V P+ HSKLSSRDQAK P
Sbjct: 93 VLKST*TMPKRAV*PSLHSKLSSRDQAKYP 4
Score = 30.4 bits (60), Expect = 3.7
Identities = 12/24 (50%), Positives = 18/24 (75%)
Frame = -2 / -1
Query: 92 RQCHNVR*SRQTIQSCPAETKRSS 21
R+C N + SR + +SC AETK+S+
Sbjct: 77 RRCRNGQCSRVSTRSCQAETKQST 6
>gb|BU989213.1|BU989213 HF21B21r HF Hordeum vulgare subsp. vulgare cDNA clone HF21B21
5-PRIME, mRNA sequence
Length = 455
Score = 61.1 bits (127), Expect = 2e-009
Identities = 22/30 (73%), Positives = 25/30 (83%)
Frame = +2 / +3
Query: 17 QGYFAWSLLDNFEWFAGFTERYGIVYVDRN 106
+GYF WSLLDNFEW G+T R+GIVYVD N
Sbjct: 6 RGYFPWSLLDNFEWRLGYTARFGIVYVDFN 95
Score = 46.0 bits (94), Expect = 8e-005
Identities = 21/30 (70%), Positives = 25/30 (83%)
Frame = -1 / -2
Query: 108 LLRST*TMP*RSVKPANHSKLSSRDQAK*P 19
+L+ST*TMP R+V P+ HSKLSSRDQ K P
Sbjct: 97 VLKST*TMPKRAV*PSLHSKLSSRDQGKYP 8
Score = 30.9 bits (61), Expect = 2.7
Identities = 13/25 (52%), Positives = 18/25 (72%)
Frame = -2 / -3
Query: 92 RQCHNVR*SRQTIQSCPAETKRSSL 18
R+C N + SR + +SC AETK S+L
Sbjct: 81 RRCRNGQCSRVSTRSCQAETKGSTL 7
>gb|AL511635.1|AL511635 AL511635 Hordeum vulgare Barke developing caryopsis (3.-15.DAP)
Hordeum vulgare subsp. vulgare cDNA clone HY08L11u 3',
mRNA sequence
Length = 620
Score = 60.2 bits (125), Expect = 4e-009
Identities = 24/48 (50%), Positives = 29/48 (60%)
Frame = +2 / -3
Query: 41 LDNFEWFAGFTERYGIVYVDRNNNCTRYMKESAKWLKEFNTAKKPSKK 184
LDNFE GFT+R+GIVYVD N +R+ K SA W F + P K
Sbjct: 495 LDNFEXAMGFTKRFGIVYVDYKNGLSRHPKASAMWFSRFLNGEAPDSK 352
Score = 29.9 bits (59), Expect = 5.1
Identities = 17/35 (48%), Positives = 20/35 (57%)
Frame = -1 / +2
Query: 147 NHLADSFM*RVQLLLRST*TMP*RSVKPANHSKLS 43
NH+AD+ R L ST*T+P V P SKLS
Sbjct: 389 NHMADALGCRESPFL*ST*TIPNLLVNPIAXSKLS 493
>gb|BF629833.2|BF629833 HVSMEb0007A10f Hordeum vulgare seedling shoot EST library
HVcDNA0002 (Dehydration stress) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEb0007A10f, mRNA sequence
Length = 493
Score = 57.9 bits (120), Expect = 2e-008
Identities = 18/32 (56%), Positives = 28/32 (87%)
Frame = +2 / +2
Query: 5 GSNVQGYFAWSLLDNFEWFAGFTERYGIVYVD 100
G++V+GYF WSLLD+FEW +G+ +R+G+ +VD
Sbjct: 329 GADVRGYFVWSLLDDFEWTSGYKDRFGLYHVD 424
Score = 30.9 bits (61), Expect(2) = 0.23
Identities = 17/35 (48%), Positives = 20/35 (57%)
Frame = -1 / -2
Query: 108 LLRST*TMP*RSVKPANHSKLSSRDQAK*PCTFDP 4
+L+ST P S+ P HSK S RD K*P T P
Sbjct: 432 VLKSTW*SPNLSLYPEVHSKSSRRDHTK*PRTSAP 328
Score = 19.9 bits (37), Expect(2) = 0.23
Identities = 7/10 (70%), Positives = 7/10 (70%)
Frame = -1 / -2
Query: 156 NSFNHLADSF 127
N NH ADSF
Sbjct: 477 NCLNHSADSF 448
>gb|BG415057.1|BG415057 HVSMEk0004O20f Hordeum vulgare testa/pericarp EST library
HVcDNA0013 (normal) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEk0004O20f, mRNA sequence
Length = 922
Score = 57.9 bits (120), Expect = 2e-008
Identities = 21/34 (61%), Positives = 26/34 (76%)
Frame = +2 / +1
Query: 5 GSNVQGYFAWSLLDNFEWFAGFTERYGIVYVDRN 106
G+ V GYFAW+LLDN +W G+T R+ IVYVD N
Sbjct: 130 GARVAGYFAWTLLDNSKWRLGYTARFSIVYVDFN 231
Score = 37.7 bits (76), Expect = 0.023
Identities = 20/35 (57%), Positives = 25/35 (71%)
Frame = -1 / -3
Query: 108 LLRST*TMP*RSVKPANHSKLSSRDQAK*PCTFDP 4
+L+ST*TM R+V P+ H +LSSR QAK P T P
Sbjct: 233 VLKST*TMLKRAV*PSLHLELSSRVQAKYPATRAP 129
>gb|AV920504.1|AV920504 AV920504 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags14f05 3', mRNA sequence
Length = 569
Score = 56.1 bits (116), Expect = 7e-008
Identities = 19/27 (70%), Positives = 22/27 (81%)
Frame = +2 / -1
Query: 20 GYFAWSLLDNFEWFAGFTERYGIVYVD 100
GYF WSL+DNFEW GFT R+G+ YVD
Sbjct: 446 GYFVWSLMDNFEWGFGFTVRFGLYYVD 366
Score = 31.3 bits (62), Expect = 2.0
Identities = 16/28 (57%), Positives = 18/28 (64%)
Frame = -1 / +1
Query: 102 RST*TMP*RSVKPANHSKLSSRDQAK*P 19
+ST* P +VKP HSKLS R K*P
Sbjct: 364 KST*YSPNLTVKPKPHSKLSMRLHTK*P 447
>gb|CA004937.1|CA004937 HU12M16u HU Hordeum vulgare subsp. vulgare cDNA clone HU12M16
3-PRIME, mRNA sequence
Length = 511
Score = 47.8 bits (98), Expect(2) = 1e-007
Identities = 18/35 (51%), Positives = 24/35 (68%)
Frame = +2 / -3
Query: 5 GSNVQGYFAWSLLDNFEWFAGFTERYGIVYVDRNN 109
GSNV+GYF WS LD FE+ G+ +G+ VD N+
Sbjct: 500 GSNVRGYFVWSFLDVFEYLFGYRMGFGLYGVDFNS 396
Score = 24.9 bits (48), Expect(2) = 1e-007
Identities = 8/14 (57%), Positives = 9/14 (64%)
Frame = +2 / -3
Query: 116 TRYMKESAKWLKEF 157
TRY + SAKW F
Sbjct: 386 TRYQRHSAKWFTSF 345
>gb|BQ468553.1|BQ468553 HM01J08T HM Hordeum vulgare subsp. vulgare cDNA clone HM01J08
5-PRIME, mRNA sequence
Length = 529
Score = 47.8 bits (98), Expect(2) = 1e-007
Identities = 18/35 (51%), Positives = 24/35 (68%)
Frame = +2 / +2
Query: 5 GSNVQGYFAWSLLDNFEWFAGFTERYGIVYVDRNN 109
GSNV+GYF WS LD FE+ G+ +G+ VD N+
Sbjct: 302 GSNVRGYFVWSFLDVFEYLFGYRMGFGLYGVDFNS 406
Score = 24.9 bits (48), Expect(2) = 1e-007
Identities = 8/14 (57%), Positives = 9/14 (64%)
Frame = +2 / +2
Query: 116 TRYMKESAKWLKEF 157
TRY + SAKW F
Sbjct: 416 TRYQRHSAKWFTSF 457
>gb|CB880642.1|CB880642 HM07D21w HM Hordeum vulgare subsp. vulgare cDNA clone HM07D21
3-PRIME, mRNA sequence
Length = 535
Score = 47.8 bits (98), Expect(2) = 1e-007
Identities = 18/35 (51%), Positives = 24/35 (68%)
Frame = +2 / -2
Query: 5 GSNVQGYFAWSLLDNFEWFAGFTERYGIVYVDRNN 109
GSNV+GYF WS LD FE+ G+ +G+ VD N+
Sbjct: 396 GSNVRGYFVWSFLDVFEYLFGYRMGFGLYGVDFNS 292
Score = 24.9 bits (48), Expect(2) = 1e-007
Identities = 8/14 (57%), Positives = 9/14 (64%)
Frame = +2 / -2
Query: 116 TRYMKESAKWLKEF 157
TRY + SAKW F
Sbjct: 282 TRYQRHSAKWFTSF 241
>gb|CA005762.1|CA005762 HU08L11u HU Hordeum vulgare subsp. vulgare cDNA clone HU08L11
3-PRIME, mRNA sequence
Length = 553
Score = 47.8 bits (98), Expect(2) = 1e-007
Identities = 18/35 (51%), Positives = 24/35 (68%)
Frame = +2 / -2
Query: 5 GSNVQGYFAWSLLDNFEWFAGFTERYGIVYVDRNN 109
GSNV+GYF WS LD FE+ G+ +G+ VD N+
Sbjct: 507 GSNVRGYFVWSFLDVFEYLFGYRMGFGLYGVDFNS 403
Score = 24.9 bits (48), Expect(2) = 1e-007
Identities = 8/14 (57%), Positives = 9/14 (64%)
Frame = +2 / -2
Query: 116 TRYMKESAKWLKEF 157
TRY + SAKW F
Sbjct: 393 TRYQRHSAKWFTSF 352
>gb|CA005269.1|CA005269 HU11E05u HU Hordeum vulgare subsp. vulgare cDNA clone HU11E05
3-PRIME, mRNA sequence
Length = 559
Score = 47.8 bits (98), Expect(2) = 1e-007
Identities = 18/35 (51%), Positives = 24/35 (68%)
Frame = +2 / -3
Query: 5 GSNVQGYFAWSLLDNFEWFAGFTERYGIVYVDRNN 109
GSNV+GYF WS LD FE+ G+ +G+ VD N+
Sbjct: 521 GSNVRGYFVWSFLDVFEYLFGYRMGFGLYGVDFNS 417
Score = 24.9 bits (48), Expect(2) = 1e-007
Identities = 8/14 (57%), Positives = 9/14 (64%)
Frame = +2 / -3
Query: 116 TRYMKESAKWLKEF 157
TRY + SAKW F
Sbjct: 407 TRYQRHSAKWFTSF 366
>gb|BF260659.3|BF260659 HVSMEf0022J15f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEf0022J15f, mRNA sequence
Length = 608
Score = 47.8 bits (98), Expect(2) = 1e-007
Identities = 18/35 (51%), Positives = 24/35 (68%)
Frame = +2 / +3
Query: 5 GSNVQGYFAWSLLDNFEWFAGFTERYGIVYVDRNN 109
GSNV+GYF WS LD FE+ G+ +G+ VD N+
Sbjct: 36 GSNVRGYFVWSFLDVFEYLFGYRMGFGLYGVDFNS 140
Score = 24.9 bits (48), Expect(2) = 1e-007
Identities = 8/14 (57%), Positives = 9/14 (64%)
Frame = +2 / +3
Query: 116 TRYMKESAKWLKEF 157
TRY + SAKW F
Sbjct: 150 TRYQRHSAKWFTSF 191
>gb|BQ472448.1|BQ472448 HB09J14T BC Hordeum vulgare subsp. vulgare cDNA clone HB09J14
5-PRIME, mRNA sequence
Length = 607
Score = 55.1 bits (114), Expect = 1e-007
Identities = 15/32 (46%), Positives = 26/32 (81%)
Frame = +2 / +2
Query: 11 NVQGYFAWSLLDNFEWFAGFTERYGIVYVDRN 106
N++GYF W+ +D FEW G+ +R+G++Y+DR+
Sbjct: 260 NIKGYFTWTFMDCFEWGDGYKDRFGLIYIDRS 355
>gb|BQ472509.1|BQ472509 HB09F20T BC Hordeum vulgare subsp. vulgare cDNA clone HB09F20
5-PRIME, mRNA sequence
Length = 558
Score = 55.1 bits (114), Expect = 1e-007
Identities = 15/32 (46%), Positives = 26/32 (81%)
Frame = +2 / +2
Query: 11 NVQGYFAWSLLDNFEWFAGFTERYGIVYVDRN 106
N++GYF W+ +D FEW G+ +R+G++Y+DR+
Sbjct: 260 NIKGYFTWTFMDCFEWGDGYKDRFGLIYIDRS 355
>gb|BU968389.1|BU968389 HB07F20r BC Hordeum vulgare subsp. vulgare cDNA clone HB07F20
5-PRIME, mRNA sequence
Length = 514
Score = 55.1 bits (114), Expect = 1e-007
Identities = 15/32 (46%), Positives = 26/32 (81%)
Frame = +2 / +2
Query: 11 NVQGYFAWSLLDNFEWFAGFTERYGIVYVDRN 106
N++GYF W+ +D FEW G+ +R+G++Y+DR+
Sbjct: 260 NIKGYFTWTFMDCFEWGDGYKDRFGLIYIDRS 355
>gb|BU968461.1|BU968461 HB07J14r BC Hordeum vulgare subsp. vulgare cDNA clone HB07J14
5-PRIME, mRNA sequence
Length = 523
Score = 55.1 bits (114), Expect = 1e-007
Identities = 15/32 (46%), Positives = 26/32 (81%)
Frame = +2 / +2
Query: 11 NVQGYFAWSLLDNFEWFAGFTERYGIVYVDRN 106
N++GYF W+ +D FEW G+ +R+G++Y+DR+
Sbjct: 260 NIKGYFTWTFMDCFEWGDGYKDRFGLIYIDRS 355
>gb|BU977487.1|BU977487 HA11I05r HA Hordeum vulgare subsp. vulgare cDNA clone HA11I05
5-PRIME, mRNA sequence
Length = 655
Score = 55.1 bits (114), Expect = 1e-007
Identities = 15/32 (46%), Positives = 26/32 (81%)
Frame = +2 / +1
Query: 11 NVQGYFAWSLLDNFEWFAGFTERYGIVYVDRN 106
N++GYF W+ +D FEW G+ +R+G++Y+DR+
Sbjct: 478 NIKGYFTWTFMDCFEWGDGYKDRFGLIYIDRS 573
>gb|CD662781.1|CD662781 UCRHV18_03ad10_b1 Drought-stressed Dicktoo barley epidermis cDNA
library Hordeum vulgare subsp. vulgare cDNA clone
UCRHV18_03ad10, mRNA sequence
Length = 899
Score = 55.1 bits (114), Expect = 1e-007
Identities = 21/36 (58%), Positives = 27/36 (75%)
Frame = +2 / -3
Query: 5 GSNVQGYFAWSLLDNFEWFAGFTERYGIVYVDRNNN 112
G+NV+GYF WS LD FE+FAG RYG+ VD N++
Sbjct: 492 GANVKGYFVWSFLDVFEFFAGPRSRYGLYRVDFNDD 385
Score = 36.8 bits (74), Expect = 0.044
Identities = 18/34 (52%), Positives = 21/34 (61%)
Frame = -1 / +2
Query: 105 LRST*TMP*RSVKPANHSKLSSRDQAK*PCTFDP 4
L+ST P R PA +SK S +DQ K*P TF P
Sbjct: 392 LKSTRYRPYRDRGPAKNSKTSRKDQTK*PFTFAP 493
>gb|CB882027.1|CB882027 HM11K09w HM Hordeum vulgare subsp. vulgare cDNA clone HM11K09
3-PRIME, mRNA sequence
Length = 647
Score = 47.8 bits (98), Expect(2) = 1e-007
Identities = 18/35 (51%), Positives = 24/35 (68%)
Frame = +2 / -1
Query: 5 GSNVQGYFAWSLLDNFEWFAGFTERYGIVYVDRNN 109
GSNV+GYF WS LD FE+ G+ +G+ VD N+
Sbjct: 518 GSNVRGYFVWSFLDVFEYLFGYRMGFGLYGVDFNS 414
Score = 24.9 bits (48), Expect(2) = 1e-007
Identities = 8/14 (57%), Positives = 9/14 (64%)
Frame = +2 / -1
Query: 116 TRYMKESAKWLKEF 157
TRY + SAKW F
Sbjct: 404 TRYQRHSAKWFTSF 363
>gb|BU993981.1|BU993981 HM05D21r HM Hordeum vulgare subsp. vulgare cDNA clone HM05D21
5-PRIME, mRNA sequence
Length = 657
Score = 47.8 bits (98), Expect(2) = 1e-007
Identities = 18/35 (51%), Positives = 24/35 (68%)
Frame = +2 / +2
Query: 5 GSNVQGYFAWSLLDNFEWFAGFTERYGIVYVDRNN 109
GSNV+GYF WS LD FE+ G+ +G+ VD N+
Sbjct: 341 GSNVRGYFVWSFLDVFEYLFGYRMGFGLYGVDFNS 445
Score = 24.9 bits (48), Expect(2) = 1e-007
Identities = 8/14 (57%), Positives = 9/14 (64%)
Frame = +2 / +2
Query: 116 TRYMKESAKWLKEF 157
TRY + SAKW F
Sbjct: 455 TRYQRHSAKWFTSF 496
>gb|CB859019.1|CB859019 HI09A13w HI Hordeum vulgare subsp. vulgare cDNA clone HI09A13
3-PRIME, mRNA sequence
Length = 680
Score = 43.7 bits (89), Expect(2) = 1e-007
Identities = 14/23 (60%), Positives = 20/23 (86%)
Frame = +2 / -1
Query: 41 LDNFEWFAGFTERYGIVYVDRNN 109
LDNFEW +G++ ++GIVYVD N+
Sbjct: 311 LDNFEWMSGYSSKFGIVYVDFNS 243
Score = 29.0 bits (57), Expect(2) = 1e-007
Identities = 10/12 (83%), Positives = 11/12 (91%)
Frame = +2 / -3
Query: 5 GSNVQGYFAWSL 40
G+NV GYFAWSL
Sbjct: 348 GANVLGYFAWSL 313
>gb|CA011331.1|CA011331 HT06E02u HT Hordeum vulgare subsp. vulgare cDNA clone HT06E02
3-PRIME, mRNA sequence
Length = 522
Score = 48.3 bits (99), Expect(2) = 1e-007
Identities = 18/32 (56%), Positives = 22/32 (68%)
Frame = +2 / -1
Query: 5 GSNVQGYFAWSLLDNFEWFAGFTERYGIVYVD 100
GSNVQGYF WS LD FE+ G+ +G+ VD
Sbjct: 435 GSNVQGYFVWSFLDVFEYLFGYRMGFGLYSVD 340
Score = 33.1 bits (66), Expect = 0.55
Identities = 12/21 (57%), Positives = 13/21 (61%)
Frame = -1 / +2
Query: 66 PANHSKLSSRDQAK*PCTFDP 4
P +S S D K*PCTFDP
Sbjct: 374 PKRYSNTSRNDHTK*PCTFDP 436
Score = 24.0 bits (46), Expect(2) = 1e-007
Identities = 8/14 (57%), Positives = 9/14 (64%)
Frame = +2 / -1
Query: 116 TRYMKESAKWLKEF 157
TRY + SAKW F
Sbjct: 321 TRYQRHSAKWFAGF 280
>gb|AL500107.1|AL500107 AL500107 Hordeum vulgare Barke etiolated leaves Hordeum vulgare
subsp. vulgare cDNA clone HK04O19r 3', mRNA sequence
Length = 666
Score = 54.7 bits (113), Expect = 2e-007
Identities = 17/30 (56%), Positives = 26/30 (86%)
Frame = +2 / -1
Query: 11 NVQGYFAWSLLDNFEWFAGFTERYGIVYVD 100
+V+GYF WSLLD+FEW +G+ +R+G+ +VD
Sbjct: 438 DVRGYFVWSLLDDFEWTSGYKDRFGLYHVD 349
Score = 29.5 bits (58), Expect(2) = 0.74
Identities = 16/32 (50%), Positives = 19/32 (59%)
Frame = -1 / +2
Query: 108 LLRST*TMP*RSVKPANHSKLSSRDQAK*PCT 13
+L+ST P S+ P HSK S RD K*P T
Sbjct: 341 VLKSTW*SPNLSLYPEVHSKSSRRDHTK*PRT 436
Score = 19.9 bits (37), Expect(2) = 0.74
Identities = 7/10 (70%), Positives = 7/10 (70%)
Frame = -1 / +2
Query: 156 NSFNHLADSF 127
N NH ADSF
Sbjct: 296 NCLNHSADSF 325
>gb|BF623927.2|BF623927 HVSMEa0007M14f Hordeum vulgare seedling shoot EST library
HVcDNA0001 (Cold stress) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEa0007M14f, mRNA sequence
Length = 725
Score = 54.7 bits (113), Expect = 2e-007
Identities = 17/32 (53%), Positives = 27/32 (84%)
Frame = +2 / +1
Query: 5 GSNVQGYFAWSLLDNFEWFAGFTERYGIVYVD 100
G++V+GYF WSLLD+FEW +G+ +R+ + +VD
Sbjct: 427 GADVRGYFVWSLLDDFEWTSGYKDRFXLYHVD 522
>gb|BE195060.3|BE195060 HVSMEh0088D01f Hordeum vulgare 5-45 DAP spike EST library
HVcDNA0009 (5 to 45 DAP) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEh0088D01f, mRNA sequence
Length = 803
Score = 54.7 bits (113), Expect = 2e-007
Identities = 20/28 (71%), Positives = 24/28 (85%)
Frame = +2 / +2
Query: 26 FAWSLLDNFEWFAGFTERYGIVYVDRNN 109
FA SLLDNFEW AG++ ++GIVYVD NN
Sbjct: 539 FAGSLLDNFEWMAGYSSKFGIVYVDFNN 622
Score = 37.7 bits (76), Expect = 0.023
Identities = 19/28 (67%), Positives = 20/28 (71%)
Frame = -1 / -3
Query: 108 LLRST*TMP*RSVKPANHSKLSSRDQAK 25
LL+ST*TMP PA HSKLS RD AK
Sbjct: 621 LLKST*TMPNLDE*PAIHSKLSRRDPAK 538
>gb|BF263505.3|BF263505 HV_CEa0006O18f Hordeum vulgare seedling green leaf EST library
HVcDNA0004 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEa0006O18f, mRNA sequence
Length = 591
Score = 54.7 bits (113), Expect = 2e-007
Identities = 21/35 (60%), Positives = 26/35 (74%)
Frame = +2 / +3
Query: 5 GSNVQGYFAWSLLDNFEWFAGFTERYGIVYVDRNN 109
G+NV+GYF WS LD FE+FAG RYG+ VD N+
Sbjct: 153 GANVKGYFVWSFLDVFEFFAGPRSRYGLYRVDFND 257
Score = 36.8 bits (74), Expect = 0.044
Identities = 18/34 (52%), Positives = 21/34 (61%)
Frame = -1 / -3
Query: 105 LRST*TMP*RSVKPANHSKLSSRDQAK*PCTFDP 4
L+ST P R PA +SK S +DQ K*P TF P
Sbjct: 253 LKSTRYRPYRDRGPAKNSKTSRKDQTK*PFTFAP 152
>gb|AV912380.1|AV912380 AV912380 K. Sato unpublished cDNA library, cv. Akashinriki
vegetative stage leaves Hordeum vulgare subsp. vulgare
cDNA clone baak3k08 3', mRNA sequence
Length = 397
Score = 54.7 bits (113), Expect = 2e-007
Identities = 21/35 (60%), Positives = 26/35 (74%)
Frame = +2 / -2
Query: 5 GSNVQGYFAWSLLDNFEWFAGFTERYGIVYVDRNN 109
G+NV+GYF WS LD FE+FAG RYG+ VD N+
Sbjct: 183 GANVKGYFVWSFLDVFEFFAGPRSRYGLYRVDFND 79
Score = 36.8 bits (74), Expect = 0.044
Identities = 18/34 (52%), Positives = 21/34 (61%)
Frame = -1 / +2
Query: 105 LRST*TMP*RSVKPANHSKLSSRDQAK*PCTFDP 4
L+ST P R PA +SK S +DQ K*P TF P
Sbjct: 83 LKSTRYRPYRDRGPAKNSKTSRKDQTK*PFTFAP 184
>gb|AV928001.1|AV928001 AV928001 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp.
vulgare cDNA clone basd13j02 3', mRNA sequence
Length = 636
Score = 54.7 bits (113), Expect = 2e-007
Identities = 21/35 (60%), Positives = 26/35 (74%)
Frame = +2 / -2
Query: 5 GSNVQGYFAWSLLDNFEWFAGFTERYGIVYVDRNN 109
G+NV+GYF WS LD FE+FAG RYG+ VD N+
Sbjct: 329 GANVKGYFVWSFLDVFEFFAGPRSRYGLYRVDFND 225
Score = 36.8 bits (74), Expect = 0.044
Identities = 18/34 (52%), Positives = 21/34 (61%)
Frame = -1 / +1
Query: 105 LRST*TMP*RSVKPANHSKLSSRDQAK*PCTFDP 4
L+ST P R PA +SK S +DQ K*P TF P
Sbjct: 229 LKSTRYRPYRDRGPAKNSKTSRKDQTK*PFTFAP 330
>gb|AV929747.1|AV929747 AV929747 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp.
vulgare cDNA clone basd16g11 3', mRNA sequence
Length = 644
Score = 54.7 bits (113), Expect = 2e-007
Identities = 21/35 (60%), Positives = 26/35 (74%)
Frame = +2 / -3
Query: 5 GSNVQGYFAWSLLDNFEWFAGFTERYGIVYVDRNN 109
G+NV+GYF WS LD FE+FAG RYG+ VD N+
Sbjct: 318 GANVKGYFVWSFLDVFEFFAGPRSRYGLYRVDFND 214
Score = 36.8 bits (74), Expect = 0.044
Identities = 18/34 (52%), Positives = 21/34 (61%)
Frame = -1 / +2
Query: 105 LRST*TMP*RSVKPANHSKLSSRDQAK*PCTFDP 4
L+ST P R PA +SK S +DQ K*P TF P
Sbjct: 218 LKSTRYRPYRDRGPAKNSKTSRKDQTK*PFTFAP 319
>gb|BJ545510.1|BJ545510 BJ545510 K. Sato unpublished cDNA library, cv. Akashinriki
vegetative stage leaves Hordeum vulgare subsp. vulgare
cDNA clone baak17f19 3', mRNA sequence
Length = 579
Score = 54.7 bits (113), Expect = 2e-007
Identities = 21/35 (60%), Positives = 26/35 (74%)
Frame = +2 / -2
Query: 5 GSNVQGYFAWSLLDNFEWFAGFTERYGIVYVDRNN 109
G+NV+GYF WS LD FE+FAG RYG+ VD N+
Sbjct: 416 GANVKGYFVWSFLDVFEFFAGPRSRYGLYRVDFND 312
Score = 36.8 bits (74), Expect = 0.044
Identities = 18/34 (52%), Positives = 21/34 (61%)
Frame = -1 / +1
Query: 105 LRST*TMP*RSVKPANHSKLSSRDQAK*PCTFDP 4
L+ST P R PA +SK S +DQ K*P TF P
Sbjct: 316 LKSTRYRPYRDRGPAKNSKTSRKDQTK*PFTFAP 417
>gb|BJ546282.1|BJ546282 BJ546282 K. Sato unpublished cDNA library, cv. Akashinriki
vegetative stage leaves Hordeum vulgare subsp. vulgare
cDNA clone baak37m03 3', mRNA sequence
Length = 547
Score = 54.7 bits (113), Expect = 2e-007
Identities = 21/35 (60%), Positives = 26/35 (74%)
Frame = +2 / -2
Query: 5 GSNVQGYFAWSLLDNFEWFAGFTERYGIVYVDRNN 109
G+NV+GYF WS LD FE+FAG RYG+ VD N+
Sbjct: 336 GANVKGYFVWSFLDVFEFFAGPRSRYGLYRVDFND 232
Score = 36.8 bits (74), Expect = 0.044
Identities = 18/34 (52%), Positives = 21/34 (61%)
Frame = -1 / +2
Query: 105 LRST*TMP*RSVKPANHSKLSSRDQAK*PCTFDP 4
L+ST P R PA +SK S +DQ K*P TF P
Sbjct: 236 LKSTRYRPYRDRGPAKNSKTSRKDQTK*PFTFAP 337
>gb|BF630667.2|BF630667 HVSMEb0012M20f Hordeum vulgare seedling shoot EST library
HVcDNA0002 (Dehydration stress) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEb0012M20f, mRNA sequence
Length = 671
Score = 48.3 bits (99), Expect(2) = 2e-007
Identities = 18/32 (56%), Positives = 22/32 (68%)
Frame = +2 / +3
Query: 5 GSNVQGYFAWSLLDNFEWFAGFTERYGIVYVD 100
GSNVQGYF WS LD FE+ G+ +G+ VD
Sbjct: 204 GSNVQGYFVWSFLDVFEYLFGYRMGFGLYSVD 299
Score = 33.1 bits (66), Expect = 0.55
Identities = 12/21 (57%), Positives = 13/21 (61%)
Frame = -1 / -2
Query: 66 PANHSKLSSRDQAK*PCTFDP 4
P +S S D K*PCTFDP
Sbjct: 265 PKRYSNTSRNDHTK*PCTFDP 203
Score = 24.0 bits (46), Expect(2) = 2e-007
Identities = 8/14 (57%), Positives = 9/14 (64%)
Frame = +2 / +3
Query: 116 TRYMKESAKWLKEF 157
TRY + SAKW F
Sbjct: 318 TRYQRHSAKWFAGF 359
>gb|BJ473754.1|BJ473754 BJ473754 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal16n02 3', mRNA sequence
Length = 686
Score = 48.3 bits (99), Expect(2) = 2e-007
Identities = 18/32 (56%), Positives = 22/32 (68%)
Frame = +2 / -1
Query: 5 GSNVQGYFAWSLLDNFEWFAGFTERYGIVYVD 100
GSNVQGYF WS LD FE+ G+ +G+ VD
Sbjct: 386 GSNVQGYFVWSFLDVFEYLFGYRMGFGLYSVD 291
Score = 33.1 bits (66), Expect = 0.55
Identities = 12/21 (57%), Positives = 13/21 (61%)
Frame = -1 / +1
Query: 66 PANHSKLSSRDQAK*PCTFDP 4
P +S S D K*PCTFDP
Sbjct: 325 PKRYSNTSRNDHTK*PCTFDP 387
Score = 24.0 bits (46), Expect(2) = 2e-007
Identities = 8/14 (57%), Positives = 9/14 (64%)
Frame = +2 / -1
Query: 116 TRYMKESAKWLKEF 157
TRY + SAKW F
Sbjct: 272 TRYQRHSAKWFAGF 231
>gb|BJ458822.1|BJ458822 BJ458822 K. Sato unpublished cDNA library, cv. Akashinriki
vegetative stage leaves Hordeum vulgare subsp. vulgare
cDNA clone baak33i24 3', mRNA sequence
Length = 704
Score = 48.3 bits (99), Expect(2) = 2e-007
Identities = 18/32 (56%), Positives = 22/32 (68%)
Frame = +2 / -2
Query: 5 GSNVQGYFAWSLLDNFEWFAGFTERYGIVYVD 100
GSNVQGYF WS LD FE+ G+ +G+ VD
Sbjct: 403 GSNVQGYFVWSFLDVFEYLFGYRMGFGLYSVD 308
Score = 33.1 bits (66), Expect = 0.55
Identities = 12/21 (57%), Positives = 13/21 (61%)
Frame = -1 / +3
Query: 66 PANHSKLSSRDQAK*PCTFDP 4
P +S S D K*PCTFDP
Sbjct: 342 PKRYSNTSRNDHTK*PCTFDP 404
Score = 24.0 bits (46), Expect(2) = 2e-007
Identities = 8/14 (57%), Positives = 9/14 (64%)
Frame = +2 / -2
Query: 116 TRYMKESAKWLKEF 157
TRY + SAKW F
Sbjct: 289 TRYQRHSAKWFAGF 248
>gb|BJ459769.1|BJ459769 BJ459769 K. Sato unpublished cDNA library, cv. Akashinriki
vegetative stage leaves Hordeum vulgare subsp. vulgare
cDNA clone baak38d08 3', mRNA sequence
Length = 711
Score = 48.3 bits (99), Expect(2) = 2e-007
Identities = 18/32 (56%), Positives = 22/32 (68%)
Frame = +2 / -2
Query: 5 GSNVQGYFAWSLLDNFEWFAGFTERYGIVYVD 100
GSNVQGYF WS LD FE+ G+ +G+ VD
Sbjct: 422 GSNVQGYFVWSFLDVFEYLFGYRMGFGLYSVD 327
Score = 33.1 bits (66), Expect = 0.55
Identities = 12/21 (57%), Positives = 13/21 (61%)
Frame = -1 / +1
Query: 66 PANHSKLSSRDQAK*PCTFDP 4
P +S S D K*PCTFDP
Sbjct: 361 PKRYSNTSRNDHTK*PCTFDP 423
Score = 24.0 bits (46), Expect(2) = 2e-007
Identities = 8/14 (57%), Positives = 9/14 (64%)
Frame = +2 / -2
Query: 116 TRYMKESAKWLKEF 157
TRY + SAKW F
Sbjct: 308 TRYQRHSAKWFAGF 267
>gb|BG365441.1|BG365441 HVSMEi0002L08f Hordeum vulgare 20 DAP spike EST library HVcDNA0010
(20 DAP) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEi0002L08f, mRNA sequence
Length = 797
Score = 47.8 bits (98), Expect(2) = 2e-007
Identities = 18/35 (51%), Positives = 24/35 (68%)
Frame = +2 / +2
Query: 5 GSNVQGYFAWSLLDNFEWFAGFTERYGIVYVDRNN 109
GSNV+GYF WS LD FE+ G+ +G+ VD N+
Sbjct: 320 GSNVRGYFVWSFLDVFEYLFGYRMGFGLYGVDFNS 424
Score = 24.9 bits (48), Expect(2) = 2e-007
Identities = 8/14 (57%), Positives = 9/14 (64%)
Frame = +2 / +2
Query: 116 TRYMKESAKWLKEF 157
TRY + SAKW F
Sbjct: 434 TRYQRHSAKWFTSF 475
>gb|BQ662158.1|BQ662158 HR01M24u HR Hordeum vulgare subsp. vulgare cDNA clone HR01M24
3-PRIME, mRNA sequence
Length = 471
Score = 48.3 bits (99), Expect(2) = 2e-007
Identities = 18/35 (51%), Positives = 24/35 (68%)
Frame = +2 / -2
Query: 5 GSNVQGYFAWSLLDNFEWFAGFTERYGIVYVDRNN 109
GSNVQGYF WS +D FE+ G+ +G+ VD N+
Sbjct: 470 GSNVQGYFVWSFVDMFEFLFGYRMGFGLYGVDFNS 366
Score = 32.7 bits (65), Expect = 0.76
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = -1 / +1
Query: 66 PANHSKLSSRDQAK*PCTFDP 4
P +S +S+ D K PCTFDP
Sbjct: 409 PKRNSNMSTNDHTKYPCTFDP 471
Score = 23.1 bits (44), Expect(2) = 2e-007
Identities = 8/14 (57%), Positives = 9/14 (64%)
Frame = +2 / -2
Query: 116 TRYMKESAKWLKEF 157
TRY + SAKW F
Sbjct: 356 TRYRRHSAKWYAGF 315
>gb|AV919354.1|AV919354 AV919354 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags5k24 3', mRNA sequence
Length = 263
Score = 54.2 bits (112), Expect = 3e-007
Identities = 18/27 (66%), Positives = 24/27 (88%)
Frame = +2 / -1
Query: 29 AWSLLDNFEWFAGFTERYGIVYVDRNN 109
AWSLLDNFEW +G++ ++GIVYVD N+
Sbjct: 263 AWSLLDNFEWMSGYSSKFGIVYVDFNS 183
Score = 31.3 bits (62), Expect = 2.0
Identities = 16/25 (64%), Positives = 17/25 (68%)
Frame = -1 / +1
Query: 108 LLRST*TMP*RSVKPANHSKLSSRD 34
LL+ST*TMP P HSKLS RD
Sbjct: 184 LLKST*TMPNLDE*PDIHSKLSRRD 258
>gb|BJ466129.1|BJ466129 BJ466129 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags28n09 3', mRNA sequence
Length = 275
Score = 54.2 bits (112), Expect = 3e-007
Identities = 18/27 (66%), Positives = 24/27 (88%)
Frame = +2 / -1
Query: 29 AWSLLDNFEWFAGFTERYGIVYVDRNN 109
AWSLLDNFEW +G++ ++GIVYVD N+
Sbjct: 275 AWSLLDNFEWMSGYSSKFGIVYVDFNS 195
Score = 31.3 bits (62), Expect = 2.0
Identities = 16/25 (64%), Positives = 17/25 (68%)
Frame = -1 / +1
Query: 108 LLRST*TMP*RSVKPANHSKLSSRD 34
LL+ST*TMP P HSKLS RD
Sbjct: 196 LLKST*TMPNLDE*PDIHSKLSRRD 270
>gb|CA000318.1|CA000318 HS09A03u HS Hordeum vulgare subsp. vulgare cDNA clone HS09A03
3-PRIME, mRNA sequence
Length = 528
Score = 48.3 bits (99), Expect(2) = 3e-007
Identities = 18/35 (51%), Positives = 24/35 (68%)
Frame = +2 / -1
Query: 5 GSNVQGYFAWSLLDNFEWFAGFTERYGIVYVDRNN 109
GSNVQGYF WS +D FE+ G+ +G+ VD N+
Sbjct: 405 GSNVQGYFVWSFVDMFEFLFGYRMGFGLYGVDFNS 301
Score = 35.0 bits (70), Expect = 0.16
Identities = 12/21 (57%), Positives = 15/21 (71%)
Frame = -1 / +2
Query: 66 PANHSKLSSRDQAK*PCTFDP 4
P +S +S+ D K*PCTFDP
Sbjct: 344 PKRNSNMSTNDHTK*PCTFDP 406
Score = 23.1 bits (44), Expect(2) = 3e-007
Identities = 8/14 (57%), Positives = 9/14 (64%)
Frame = +2 / -1
Query: 116 TRYMKESAKWLKEF 157
TRY + SAKW F
Sbjct: 291 TRYRRHSAKWYAGF 250
>gb|AV912606.1|AV912606 AV912606 K. Sato unpublished cDNA library, cv. Akashinriki
vegetative stage leaves Hordeum vulgare subsp. vulgare
cDNA clone baak4k06 3', mRNA sequence
Length = 531
Score = 48.3 bits (99), Expect(2) = 3e-007
Identities = 18/35 (51%), Positives = 24/35 (68%)
Frame = +2 / -2
Query: 5 GSNVQGYFAWSLLDNFEWFAGFTERYGIVYVDRNN 109
GSNVQGYF WS +D FE+ G+ +G+ VD N+
Sbjct: 386 GSNVQGYFVWSFVDMFEFLFGYRMGFGLYGVDFNS 282
Score = 35.0 bits (70), Expect = 0.16
Identities = 12/21 (57%), Positives = 15/21 (71%)
Frame = -1 / +1
Query: 66 PANHSKLSSRDQAK*PCTFDP 4
P +S +S+ D K*PCTFDP
Sbjct: 325 PKRNSNMSTNDHTK*PCTFDP 387
Score = 23.1 bits (44), Expect(2) = 3e-007
Identities = 8/14 (57%), Positives = 9/14 (64%)
Frame = +2 / -2
Query: 116 TRYMKESAKWLKEF 157
TRY + SAKW F
Sbjct: 272 TRYRRHSAKWYAGF 231
>gb|AV919977.1|AV919977 AV919977 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags8m07 3', mRNA sequence
Length = 529
Score = 48.3 bits (99), Expect(2) = 3e-007
Identities = 18/35 (51%), Positives = 24/35 (68%)
Frame = +2 / -2
Query: 5 GSNVQGYFAWSLLDNFEWFAGFTERYGIVYVDRNN 109
GSNVQGYF WS +D FE+ G+ +G+ VD N+
Sbjct: 381 GSNVQGYFVWSFVDMFEFLFGYRMGFGLYGVDFNS 277
Score = 35.0 bits (70), Expect = 0.16
Identities = 12/21 (57%), Positives = 15/21 (71%)
Frame = -1 / +2
Query: 66 PANHSKLSSRDQAK*PCTFDP 4
P +S +S+ D K*PCTFDP
Sbjct: 320 PKRNSNMSTNDHTK*PCTFDP 382
Score = 23.1 bits (44), Expect(2) = 3e-007
Identities = 8/14 (57%), Positives = 9/14 (64%)
Frame = +2 / -2
Query: 116 TRYMKESAKWLKEF 157
TRY + SAKW F
Sbjct: 267 TRYRRHSAKWYAGF 226
>gb|BQ662183.1|BQ662183 HR01O22u HR Hordeum vulgare subsp. vulgare cDNA clone HR01O22
3-PRIME, mRNA sequence
Length = 532
Score = 48.3 bits (99), Expect(2) = 3e-007
Identities = 18/35 (51%), Positives = 24/35 (68%)
Frame = +2 / -2
Query: 5 GSNVQGYFAWSLLDNFEWFAGFTERYGIVYVDRNN 109
GSNVQGYF WS +D FE+ G+ +G+ VD N+
Sbjct: 468 GSNVQGYFVWSFVDMFEFLFGYRMGFGLYGVDFNS 364
Score = 35.0 bits (70), Expect = 0.16
Identities = 12/21 (57%), Positives = 15/21 (71%)
Frame = -1 / +2
Query: 66 PANHSKLSSRDQAK*PCTFDP 4
P +S +S+ D K*PCTFDP
Sbjct: 407 PKRNSNMSTNDHTK*PCTFDP 469
Score = 23.1 bits (44), Expect(2) = 3e-007
Identities = 8/14 (57%), Positives = 9/14 (64%)
Frame = +2 / -2
Query: 116 TRYMKESAKWLKEF 157
TRY + SAKW F
Sbjct: 354 TRYRRHSAKWYAGF 313
>gb|CA006118.1|CA006118 HU05H21u HU Hordeum vulgare subsp. vulgare cDNA clone HU05H21
3-PRIME, mRNA sequence
Length = 541
Score = 48.3 bits (99), Expect(2) = 3e-007
Identities = 18/35 (51%), Positives = 24/35 (68%)
Frame = +2 / -2
Query: 5 GSNVQGYFAWSLLDNFEWFAGFTERYGIVYVDRNN 109
GSNVQGYF WS +D FE+ G+ +G+ VD N+
Sbjct: 432 GSNVQGYFVWSFVDMFEFLFGYRMGFGLYGVDFNS 328
Score = 35.0 bits (70), Expect = 0.16
Identities = 12/21 (57%), Positives = 15/21 (71%)
Frame = -1 / +2
Query: 66 PANHSKLSSRDQAK*PCTFDP 4
P +S +S+ D K*PCTFDP
Sbjct: 371 PKRNSNMSTNDHTK*PCTFDP 433
Score = 23.1 bits (44), Expect(2) = 3e-007
Identities = 8/14 (57%), Positives = 9/14 (64%)
Frame = +2 / -2
Query: 116 TRYMKESAKWLKEF 157
TRY + SAKW F
Sbjct: 318 TRYRRHSAKWYAGF 277
>gb|BQ664794.1|BQ664794 HV04O11u HV Hordeum vulgare subsp. vulgare cDNA clone HV04O11
3-PRIME, mRNA sequence
Length = 603
Score = 48.3 bits (99), Expect(2) = 3e-007
Identities = 18/35 (51%), Positives = 24/35 (68%)
Frame = +2 / -2
Query: 5 GSNVQGYFAWSLLDNFEWFAGFTERYGIVYVDRNN 109
GSNVQGYF WS +D FE+ G+ +G+ VD N+
Sbjct: 434 GSNVQGYFVWSFVDMFEFLFGYRMGFGLYGVDFNS 330
Score = 35.0 bits (70), Expect = 0.16
Identities = 12/21 (57%), Positives = 15/21 (71%)
Frame = -1 / +1
Query: 66 PANHSKLSSRDQAK*PCTFDP 4
P +S +S+ D K*PCTFDP
Sbjct: 373 PKRNSNMSTNDHTK*PCTFDP 435
Score = 23.1 bits (44), Expect(2) = 3e-007
Identities = 8/14 (57%), Positives = 9/14 (64%)
Frame = +2 / -2
Query: 116 TRYMKESAKWLKEF 157
TRY + SAKW F
Sbjct: 320 TRYRRHSAKWYAGF 279
>gb|BI954140.1|BI954140 HVSMEm0016F19f Hordeum vulgare green seedling EST library
HVcDNA0014 (Blumeria infected) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEm0016F19f, mRNA sequence
Length = 683
Score = 53.8 bits (111), Expect = 3e-007
Identities = 20/36 (55%), Positives = 26/36 (72%)
Frame = +2 / +1
Query: 5 GSNVQGYFAWSLLDNFEWFAGFTERYGIVYVDRNNN 112
G+NV+GYF W LD FE+FAG RYG+ VD N++
Sbjct: 526 GANVKGYFVWCFLDVFEFFAGAPSRYGLYRVDFNDD 633
>gb|AV921900.1|AV921900 AV921900 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags19a14 3', mRNA sequence
Length = 662
Score = 48.3 bits (99), Expect(2) = 3e-007
Identities = 18/35 (51%), Positives = 24/35 (68%)
Frame = +2 / -2
Query: 5 GSNVQGYFAWSLLDNFEWFAGFTERYGIVYVDRNN 109
GSNVQGYF WS +D FE+ G+ +G+ VD N+
Sbjct: 403 GSNVQGYFVWSFVDMFEFLFGYRMGFGLYGVDFNS 299
Score = 35.0 bits (70), Expect = 0.16
Identities = 12/21 (57%), Positives = 15/21 (71%)
Frame = -1 / +3
Query: 66 PANHSKLSSRDQAK*PCTFDP 4
P +S +S+ D K*PCTFDP
Sbjct: 342 PKRNSNMSTNDHTK*PCTFDP 404
Score = 23.1 bits (44), Expect(2) = 3e-007
Identities = 8/14 (57%), Positives = 9/14 (64%)
Frame = +2 / -2
Query: 116 TRYMKESAKWLKEF 157
TRY + SAKW F
Sbjct: 289 TRYRRHSAKWYAGF 248
>gb|CB858315.1|CB858315 HI06J05w HI Hordeum vulgare subsp. vulgare cDNA clone HI06J05
3-PRIME, mRNA sequence
Length = 661
Score = 48.3 bits (99), Expect(2) = 3e-007
Identities = 18/35 (51%), Positives = 24/35 (68%)
Frame = +2 / -2
Query: 5 GSNVQGYFAWSLLDNFEWFAGFTERYGIVYVDRNN 109
GSNVQGYF WS +D FE+ G+ +G+ VD N+
Sbjct: 537 GSNVQGYFVWSFVDMFEFLFGYRMGFGLYGVDFNS 433
Score = 35.0 bits (70), Expect = 0.16
Identities = 12/21 (57%), Positives = 15/21 (71%)
Frame = -1 / +2
Query: 66 PANHSKLSSRDQAK*PCTFDP 4
P +S +S+ D K*PCTFDP
Sbjct: 476 PKRNSNMSTNDHTK*PCTFDP 538
Score = 23.1 bits (44), Expect(2) = 3e-007
Identities = 8/14 (57%), Positives = 9/14 (64%)
Frame = +2 / -2
Query: 116 TRYMKESAKWLKEF 157
TRY + SAKW F
Sbjct: 423 TRYRRHSAKWYAGF 382
>gb|BJ463795.1|BJ463795 BJ463795 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags30i11 5', mRNA sequence
Length = 669
Score = 48.3 bits (99), Expect(2) = 3e-007
Identities = 18/35 (51%), Positives = 24/35 (68%)
Frame = +2 / +3
Query: 5 GSNVQGYFAWSLLDNFEWFAGFTERYGIVYVDRNN 109
GSNVQGYF WS +D FE+ G+ +G+ VD N+
Sbjct: 357 GSNVQGYFVWSFVDMFEFLFGYRMGFGLYGVDFNS 461
Score = 35.0 bits (70), Expect = 0.16
Identities = 12/21 (57%), Positives = 15/21 (71%)
Frame = -1 / -3
Query: 66 PANHSKLSSRDQAK*PCTFDP 4
P +S +S+ D K*PCTFDP
Sbjct: 418 PKRNSNMSTNDHTK*PCTFDP 356
Score = 23.1 bits (44), Expect(2) = 3e-007
Identities = 8/14 (57%), Positives = 9/14 (64%)
Frame = +2 / +3
Query: 116 TRYMKESAKWLKEF 157
TRY + SAKW F
Sbjct: 471 TRYRRHSAKWYAGF 512
>gb|BQ659752.1|BQ659752 HF01J17w HF Hordeum vulgare subsp. vulgare cDNA clone HF01J17
3-PRIME, mRNA sequence
Length = 681
Score = 48.3 bits (99), Expect(2) = 4e-007
Identities = 18/35 (51%), Positives = 24/35 (68%)
Frame = +2 / -3
Query: 5 GSNVQGYFAWSLLDNFEWFAGFTERYGIVYVDRNN 109
GSNVQGYF WS +D FE+ G+ +G+ VD N+
Sbjct: 430 GSNVQGYFVWSFVDMFEFLFGYRMGFGLYGVDFNS 326
Score = 35.0 bits (70), Expect = 0.16
Identities = 12/21 (57%), Positives = 15/21 (71%)
Frame = -1 / +3
Query: 66 PANHSKLSSRDQAK*PCTFDP 4
P +S +S+ D K*PCTFDP
Sbjct: 369 PKRNSNMSTNDHTK*PCTFDP 431
Score = 23.1 bits (44), Expect(2) = 4e-007
Identities = 8/14 (57%), Positives = 9/14 (64%)
Frame = +2 / -3
Query: 116 TRYMKESAKWLKEF 157
TRY + SAKW F
Sbjct: 316 TRYRRHSAKWYAGF 275
>gb|CV059036.1|CV059036 BNEL43f6 Barley EST endosperm library Hordeum vulgare subsp.
vulgare cDNA clone BNEL43f6 5' similar to putative
beta-glucosidase, mRNA sequence
Length = 506
Score = 53.3 bits (110), Expect(2) = 4e-007
Identities = 18/23 (78%), Positives = 21/23 (91%)
Frame = +2 / +2
Query: 5 GSNVQGYFAWSLLDNFEWFAGFT 73
G+NV GYFAWSLLDNFEW +G+T
Sbjct: 281 GANVVGYFAWSLLDNFEWLSGYT 349
Score = 38.6 bits (78), Expect = 0.012
Identities = 16/21 (76%), Positives = 17/21 (80%)
Frame = -1 / -3
Query: 66 PANHSKLSSRDQAK*PCTFDP 4
P +HSKLS RDQAK*P TF P
Sbjct: 342 PDSHSKLSRRDQAK*PTTFAP 280
Score = 17.6 bits (32), Expect(2) = 4e-007
Identities = 7/12 (58%), Positives = 8/12 (66%)
Frame = +2 / +1
Query: 65 GFTERYGIVYVD 100
G + GIVYVD
Sbjct: 340 GLHLQVGIVYVD 375
>gb|BJ467970.1|BJ467970 BJ467970 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags30i11 3', mRNA sequence
Length = 691
Score = 48.3 bits (99), Expect(2) = 4e-007
Identities = 18/35 (51%), Positives = 24/35 (68%)
Frame = +2 / -2
Query: 5 GSNVQGYFAWSLLDNFEWFAGFTERYGIVYVDRNN 109
GSNVQGYF WS +D FE+ G+ +G+ VD N+
Sbjct: 423 GSNVQGYFVWSFVDMFEFLFGYRMGFGLYGVDFNS 319
Score = 35.0 bits (70), Expect = 0.16
Identities = 12/21 (57%), Positives = 15/21 (71%)
Frame = -1 / +2
Query: 66 PANHSKLSSRDQAK*PCTFDP 4
P +S +S+ D K*PCTFDP
Sbjct: 362 PKRNSNMSTNDHTK*PCTFDP 424
Score = 23.1 bits (44), Expect(2) = 4e-007
Identities = 8/14 (57%), Positives = 9/14 (64%)
Frame = +2 / -2
Query: 116 TRYMKESAKWLKEF 157
TRY + SAKW F
Sbjct: 309 TRYRRHSAKWYAGF 268
>gb|AV918813.1|AV918813 AV918813 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags22f16 3', mRNA sequence
Length = 698
Score = 48.3 bits (99), Expect(2) = 4e-007
Identities = 18/35 (51%), Positives = 24/35 (68%)
Frame = +2 / -2
Query: 5 GSNVQGYFAWSLLDNFEWFAGFTERYGIVYVDRNN 109
GSNVQGYF WS +D FE+ G+ +G+ VD N+
Sbjct: 418 GSNVQGYFVWSFVDMFEFLFGYRMGFGLYGVDFNS 314
Score = 35.0 bits (70), Expect = 0.16
Identities = 12/21 (57%), Positives = 15/21 (71%)
Frame = -1 / +3
Query: 66 PANHSKLSSRDQAK*PCTFDP 4
P +S +S+ D K*PCTFDP
Sbjct: 357 PKRNSNMSTNDHTK*PCTFDP 419
Score = 23.1 bits (44), Expect(2) = 4e-007
Identities = 8/14 (57%), Positives = 9/14 (64%)
Frame = +2 / -2
Query: 116 TRYMKESAKWLKEF 157
TRY + SAKW F
Sbjct: 304 TRYRRHSAKWYAGF 263
>gb|AV917652.1|AV917652 AV917652 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags10o07 3', mRNA sequence
Length = 700
Score = 48.3 bits (99), Expect(2) = 4e-007
Identities = 18/35 (51%), Positives = 24/35 (68%)
Frame = +2 / -2
Query: 5 GSNVQGYFAWSLLDNFEWFAGFTERYGIVYVDRNN 109
GSNVQGYF WS +D FE+ G+ +G+ VD N+
Sbjct: 420 GSNVQGYFVWSFVDMFEFLFGYRMGFGLYGVDFNS 316
Score = 35.0 bits (70), Expect = 0.16
Identities = 12/21 (57%), Positives = 15/21 (71%)
Frame = -1 / +2
Query: 66 PANHSKLSSRDQAK*PCTFDP 4
P +S +S+ D K*PCTFDP
Sbjct: 359 PKRNSNMSTNDHTK*PCTFDP 421
Score = 23.1 bits (44), Expect(2) = 4e-007
Identities = 8/14 (57%), Positives = 9/14 (64%)
Frame = +2 / -2
Query: 116 TRYMKESAKWLKEF 157
TRY + SAKW F
Sbjct: 306 TRYRRHSAKWYAGF 265
>gb|BQ661549.1|BQ661549 HM03P05u HM Hordeum vulgare subsp. vulgare cDNA clone HM03P05
3-PRIME, mRNA sequence
Length = 496
Score = 53.3 bits (110), Expect = 5e-007
Identities = 19/32 (59%), Positives = 24/32 (75%)
Frame = +2 / -3
Query: 5 GSNVQGYFAWSLLDNFEWFAGFTERYGIVYVD 100
G+NV+GYF WS LD FE AG+ RYG+ Y+D
Sbjct: 395 GANVKGYFVWSFLDVFELMAGYYLRYGLPYID 300
>gb|BM373002.2|BM373002 EBma04_SQ002_L05_R maternal, 10 DPA, no treatment, cv Optic, EBma04
Hordeum vulgare subsp. vulgare cDNA clone
EBma04_SQ002_L05 5', mRNA sequence
Length = 616
Score = 53.3 bits (110), Expect = 5e-007
Identities = 15/32 (46%), Positives = 25/32 (78%)
Frame = +2 / +1
Query: 11 NVQGYFAWSLLDNFEWFAGFTERYGIVYVDRN 106
N++GYF W+ +D FEW G+ +R G++Y+DR+
Sbjct: 496 NIKGYFTWTFMDCFEWGDGYKDRXGLIYIDRS 591
>gb|BF253999.2|BF253999 HVSMEf0002L11f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEf0002L11f, mRNA sequence
Length = 550
Score = 47.8 bits (98), Expect(2) = 5e-007
Identities = 18/35 (51%), Positives = 24/35 (68%)
Frame = +2 / +2
Query: 5 GSNVQGYFAWSLLDNFEWFAGFTERYGIVYVDRNN 109
GSNV+GYF WS LD FE+ G+ +G+ VD N+
Sbjct: 146 GSNVRGYFVWSFLDVFEYLFGYRMGFGLYGVDFNS 250
Score = 22.6 bits (43), Expect(2) = 5e-007
Identities = 7/10 (70%), Positives = 8/10 (80%)
Frame = +2 / +2
Query: 116 TRYMKESAKW 145
TRY + SAKW
Sbjct: 260 TRYQRHSAKW 289
>gb|BG365882.1|BG365882 HVSMEi0004J22f Hordeum vulgare 20 DAP spike EST library HVcDNA0010
(20 DAP) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEi0004J22f, mRNA sequence
Length = 923
Score = 48.3 bits (99), Expect(2) = 6e-007
Identities = 18/35 (51%), Positives = 24/35 (68%)
Frame = +2 / +2
Query: 5 GSNVQGYFAWSLLDNFEWFAGFTERYGIVYVDRNN 109
GSNVQGYF WS +D FE+ G+ +G+ VD N+
Sbjct: 287 GSNVQGYFVWSFVDMFEFLFGYRMGFGLYGVDFNS 391
Score = 35.0 bits (70), Expect = 0.16
Identities = 12/21 (57%), Positives = 15/21 (71%)
Frame = -1 / -3
Query: 66 PANHSKLSSRDQAK*PCTFDP 4
P +S +S+ D K*PCTFDP
Sbjct: 348 PKRNSNMSTNDHTK*PCTFDP 286
Score = 23.1 bits (44), Expect(2) = 6e-007
Identities = 8/14 (57%), Positives = 9/14 (64%)
Frame = +2 / +2
Query: 116 TRYMKESAKWLKEF 157
TRY + SAKW F
Sbjct: 401 TRYRRHSAKWYAGF 442
>gb|CA024997.1|CA024997 HZ50O20r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ50O20
5-PRIME, mRNA sequence
Length = 324
Score = 52.4 bits (108), Expect = 9e-007
Identities = 17/26 (65%), Positives = 23/26 (88%)
Frame = +2 / -2
Query: 32 WSLLDNFEWFAGFTERYGIVYVDRNN 109
WSLLDNFEW +G++ ++GIVYVD N+
Sbjct: 323 WSLLDNFEWMSGYSSKFGIVYVDFNS 246
Score = 29.0 bits (57), Expect = 9.7
Identities = 15/25 (60%), Positives = 16/25 (64%)
Frame = -1 / +1
Query: 108 LLRST*TMP*RSVKPANHSKLSSRD 34
LL+ST TMP P HSKLS RD
Sbjct: 247 LLKSTXTMPNLDE*PDIHSKLSRRD 321
>gb|BJ468562.1|BJ468562 BJ468562 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags39f13 3', mRNA sequence
Length = 594
Score = 51.5 bits (106), Expect = 2e-006
Identities = 17/33 (51%), Positives = 25/33 (75%)
Frame = +2 / -1
Query: 5 GSNVQGYFAWSLLDNFEWFAGFTERYGIVYVDR 103
G NV+GY W+ D+FE+ GF +R+G++YVDR
Sbjct: 393 GVNVKGYITWTFQDDFEFGDGFKDRFGLIYVDR 295
>gb|BQ756549.1|BQ756549 EBem09_SQ003_A16_R embryo, 1 Day germination, no treatment, cv
Optic, EBem09 Hordeum vulgare subsp. vulgare cDNA clone
EBem09_SQ003_A16 5', mRNA sequence
Length = 496
Score = 51.5 bits (106), Expect = 2e-006
Identities = 17/33 (51%), Positives = 25/33 (75%)
Frame = +2 / +2
Query: 5 GSNVQGYFAWSLLDNFEWFAGFTERYGIVYVDR 103
G NV+GY W+ D+FE+ GF +R+G++YVDR
Sbjct: 185 GVNVKGYITWTFQDDFEFGDGFKDRFGLIYVDR 283
>gb|BF261097.2|BF261097 HVSMEf0023M01f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEf0023M01f, mRNA sequence
Length = 751
Score = 51.0 bits (105), Expect = 2e-006
Identities = 17/22 (77%), Positives = 20/22 (90%)
Frame = +2 / +2
Query: 5 GSNVQGYFAWSLLDNFEWFAGF 70
G+NV GYFAWSLLDNFEW +G+
Sbjct: 686 GANVLGYFAWSLLDNFEWMSGY 751
Score = 31.8 bits (63), Expect = 1.4
Identities = 12/19 (63%), Positives = 16/19 (84%)
Frame = -3 / -1
Query: 67 AGKPFKVVQQRPSEVALHI 11
AG PFKVV++RP EVA ++
Sbjct: 748 AGHPFKVVEKRPREVAENV 692
Score = 30.9 bits (61), Expect = 2.7
Identities = 14/21 (66%), Positives = 14/21 (66%)
Frame = -1 / -2
Query: 66 PANHSKLSSRDQAK*PCTFDP 4
P HSKLS RD AK*P T P
Sbjct: 747 PDIHSKLSRRDHAK*PRTLAP 685
>gb|BE214176.3|BE214176 HV_CEb0002I18f Hordeum vulgare seedling green leaf EST library
HVcDNA0005 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEb0002I18f, mRNA sequence
Length = 394
Score = 51.0 bits (105), Expect = 2e-006
Identities = 20/35 (57%), Positives = 25/35 (71%)
Frame = +2 / +3
Query: 5 GSNVQGYFAWSLLDNFEWFAGFTERYGIVYVDRNN 109
G +V+GYF WS LD FE+FAG RYG+ VD N+
Sbjct: 15 GISVKGYFVWSFLDVFEFFAGPRSRYGLYRVDFND 119
Score = 33.6 bits (67), Expect = 0.40
Identities = 17/34 (50%), Positives = 20/34 (58%)
Frame = -1 / -1
Query: 105 LRST*TMP*RSVKPANHSKLSSRDQAK*PCTFDP 4
L+ST P R PA +SK S +DQ K*P T P
Sbjct: 115 LKSTRYRPYRDRGPAKNSKTSRKDQTK*PFTLMP 14
>gb|CA009798.1|CA009798 HT12K07u HT Hordeum vulgare subsp. vulgare cDNA clone HT12K07
3-PRIME, mRNA sequence
Length = 546
Score = 51.0 bits (105), Expect = 2e-006
Identities = 18/32 (56%), Positives = 24/32 (75%)
Frame = +2 / -2
Query: 5 GSNVQGYFAWSLLDNFEWFAGFTERYGIVYVD 100
G NV+GYFAW+ LD FE+ +G+ RYG+ VD
Sbjct: 506 GVNVKGYFAWAFLDVFEYLSGYQARYGLYRVD 411
>gb|BG301241.1|BG301241 HVSMEb0020C10f Hordeum vulgare seedling shoot EST library
HVcDNA0002 (Dehydration stress) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEb0020C10f, mRNA sequence
Length = 895
Score = 44.1 bits (90), Expect(2) = 3e-006
Identities = 17/35 (48%), Positives = 23/35 (65%)
Frame = +2 / +3
Query: 5 GSNVQGYFAWSLLDNFEWFAGFTERYGIVYVDRNN 109
GSNV+GYF WS LD FE+ G+ + + VD N+
Sbjct: 573 GSNVRGYFVWSFLDVFEYLFGYRMGFELYGVDFNS 677
Score = 24.4 bits (47), Expect(2) = 3e-006
Identities = 8/14 (57%), Positives = 9/14 (64%)
Frame = +2 / +3
Query: 116 TRYMKESAKWLKEF 157
TRY + SAKW F
Sbjct: 687 TRYQRPSAKWFTSF 728
>gb|BE437689.1|BE437689 SFR006.D12F990705 ITEC SFR Barley Leaf Epidermis Library Hordeum
vulgare subsp. vulgare cDNA clone SF, mRNA sequence
Length = 531
Score = 48.7 bits (100), Expect = 1e-005
Identities = 15/28 (53%), Positives = 24/28 (85%)
Frame = +2 / +3
Query: 5 GSNVQGYFAWSLLDNFEWFAGFTERYGI 88
G++V+ YF WSLLD+FEW +G+ +R+G+
Sbjct: 447 GADVRCYFVWSLLDDFEWTSGYKDRFGL 530
>gb|AV832993.1|AV832993 AV832993 K. Sato unpublished cDNA library: Hordeum vulgare subsp.
vulgare top three leaves adult, heading stage Hordeum
vulgare subsp. vulgare cDNA clone baal5f06, mRNA
sequence
Length = 694
Score = 48.7 bits (100), Expect = 1e-005
Identities = 18/32 (56%), Positives = 24/32 (75%)
Frame = +2 / -2
Query: 5 GSNVQGYFAWSLLDNFEWFAGFTERYGIVYVD 100
G+NV+GYFAW+ LD FE+ AG+ YG+ VD
Sbjct: 366 GANVKGYFAWNFLDIFEFLAGYKLGYGMYRVD 271
>gb|BJ468579.1|BJ468579 BJ468579 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags39g17 3', mRNA sequence
Length = 661
Score = 48.3 bits (99), Expect = 2e-005
Identities = 18/35 (51%), Positives = 24/35 (68%)
Frame = +2 / -1
Query: 5 GSNVQGYFAWSLLDNFEWFAGFTERYGIVYVDRNN 109
GSNVQGYF WS +D FE+ G+ +G+ VD N+
Sbjct: 403 GSNVQGYFVWSFVDMFEFLFGYRMGFGLYGVDFNS 299
Score = 35.0 bits (70), Expect = 0.16
Identities = 12/21 (57%), Positives = 15/21 (71%)
Frame = -1 / +3
Query: 66 PANHSKLSSRDQAK*PCTFDP 4
P +S +S+ D K*PCTFDP
Sbjct: 342 PKRNSNMSTNDHTK*PCTFDP 404
>gb|AL508271.1|AL508271 AL508271 Hordeum vulgare Barke developing caryopsis (3.-15.DAP)
Hordeum vulgare subsp. vulgare cDNA clone HY08E11V 5',
mRNA sequence
Length = 700
Score = 47.3 bits (97), Expect = 3e-005
Identities = 16/23 (69%), Positives = 19/23 (82%)
Frame = +2 / -1
Query: 32 WSLLDNFEWFAGFTERYGIVYVD 100
WSL+DNFEW GFT R+G+ YVD
Sbjct: 493 WSLMDNFEWGFGFTVRFGLYYVD 425
>gb|AV921085.1|AV921085 AV921085 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags16o12 3', mRNA sequence
Length = 532
Score = 41.8 bits (85), Expect(2) = 4e-005
Identities = 13/19 (68%), Positives = 17/19 (89%)
Frame = +2 / -3
Query: 44 DNFEWFAGFTERYGIVYVD 100
DNFEW +G+T ++GIVYVD
Sbjct: 530 DNFEWLSGYTSKFGIVYVD 474
Score = 22.1 bits (42), Expect(2) = 4e-005
Identities = 8/21 (38%), Positives = 13/21 (61%)
Frame = +3 / -1
Query: 138 PSG*KSSTPRKSPARRFLRQL 200
P+G ++ R+ PAR+ R L
Sbjct: 439 PTGSRTCCRRRGPARKMARSL 377
>gb|BM373123.2|BM373123 EBma04_SQ003_D03_R maternal, 10 DPA, no treatment, cv Optic, EBma04
Hordeum vulgare subsp. vulgare cDNA clone
EBma04_SQ003_D03 5', mRNA sequence
Length = 695
Score = 45.1 bits (92), Expect = 1e-004
Identities = 12/27 (44%), Positives = 21/27 (77%)
Frame = +2 / +3
Query: 11 NVQGYFAWSLLDNFEWFAGFTERYGIV 91
N++GYF W+ +D FEW G+ +R+G++
Sbjct: 615 NIKGYFTWTFMDCFEWGDGYKDRFGLI 695
>gb|AJ462184.1|AJ462184 AJ462184 S00002 Hordeum vulgare subsp. vulgare cDNA clone
S0000200054C07F2, mRNA sequence
Length = 360
Score = 39.1 bits (79), Expect(2) = 2e-004
Identities = 12/18 (66%), Positives = 16/18 (88%)
Frame = +2 / +3
Query: 47 NFEWFAGFTERYGIVYVD 100
NFEW +G+T ++GIVYVD
Sbjct: 3 NFEWLSGYTSKFGIVYVD 56
Score = 22.1 bits (42), Expect(2) = 2e-004
Identities = 8/21 (38%), Positives = 13/21 (61%)
Frame = +3 / +1
Query: 138 PSG*KSSTPRKSPARRFLRQL 200
P+G ++ R+ PAR+ R L
Sbjct: 91 PTGSRTCCRRRGPARKMARSL 153
>gb|BQ661030.1|BQ661030 HM01J08w HM Hordeum vulgare subsp. vulgare cDNA clone HM01J08
3-PRIME, mRNA sequence
Length = 521
Score = 34.5 bits (69), Expect(2) = 8e-004
Identities = 12/17 (70%), Positives = 14/17 (82%)
Frame = +2 / -2
Query: 8 SNVQGYFAWSLLDNFEW 58
SNV+GYF WS LD FE+
Sbjct: 520 SNVRGYFVWSFLDVFEY 470
Score = 24.9 bits (48), Expect(2) = 8e-004
Identities = 8/14 (57%), Positives = 9/14 (64%)
Frame = +2 / -3
Query: 116 TRYMKESAKWLKEF 157
TRY + SAKW F
Sbjct: 408 TRYQRHSAKWFTSF 367
>gb|BI948933.1|BI948933 HVSMEl0011I20f Hordeum vulgare spike EST library HVcDNA0012
(Fusarium infected) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEl0011I20f, mRNA sequence
Length = 848
Score = 30.9 bits (61), Expect(2) = 0.002
Identities = 12/20 (60%), Positives = 15/20 (75%)
Frame = +2 / -3
Query: 47 NFEWFAGFTERYGIVYVDRN 106
+FE G+T R+GIVYVD N
Sbjct: 405 HFECRLGYTARFGIVYVDFN 346
Score = 29.5 bits (58), Expect(2) = 0.11
Identities = 13/20 (65%), Positives = 17/20 (85%)
Frame = -1 / +2
Query: 108 LLRST*TMP*RSVKPANHSK 49
+L+ST*TMP R+V P+ HSK
Sbjct: 344 VLKST*TMPKRAV*PSLHSK 403
Score = 28.6 bits (56), Expect(2) = 0.002
Identities = 10/14 (71%), Positives = 11/14 (78%)
Frame = +2 / -1
Query: 5 GSNVQGYFAWSLLD 46
G+ V GYFAWS LD
Sbjct: 446 GARVAGYFAWSRLD 405
Score = 23.5 bits (45), Expect(2) = 0.11
Identities = 10/16 (62%), Positives = 12/16 (75%)
Frame = -1 / +1
Query: 51 KLSSRDQAK*PCTFDP 4
++SSRDQAK P T P
Sbjct: 400 EVSSRDQAKYPATRAP 447
>gb|BF254222.2|BF254222 HVSMEf0003F20f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEf0003F20f, mRNA sequence
Length = 556
Score = 39.1 bits (79), Expect = 0.009
Identities = 14/19 (73%), Positives = 16/19 (84%)
Frame = +2 / +3
Query: 11 NVQGYFAWSLLDNFEWFAG 67
+V YFAWSLLDN+EW AG
Sbjct: 489 DVPRYFAWSLLDNWEWTAG 545
>gb|BG300683.1|BG300683 HVSMEb0017P19f Hordeum vulgare seedling shoot EST library
HVcDNA0002 (Dehydration stress) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEb0017P19f, mRNA sequence
Length = 888
Score = 37.3 bits (75), Expect = 0.032
Identities = 13/32 (40%), Positives = 21/32 (65%)
Frame = +2 / +2
Query: 5 GSNVQGYFAWSLLDNFEWFAGFTERYGIVYVD 100
G NV+GY W+ D+FE+ GF +R ++ +D
Sbjct: 791 GVNVEGYITWTFPDDFEFGDGFKDRVRLI*LD 886
>gb|BG417583.2|BG417583 HVSMEk0018E23f Hordeum vulgare testa/pericarp EST library
HVcDNA0013 (normal) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEk0018E23f, mRNA sequence
Length = 822
Score = 37.3 bits (75), Expect = 0.032
Identities = 13/18 (72%), Positives = 15/18 (83%)
Frame = +2 / +2
Query: 5 GSNVQGYFAWSLLDNFEW 58
GSNV+GYF WS LD FE+
Sbjct: 707 GSNVRGYFVWSFLDVFEY 760
>gb|BQ766937.1|BQ766937 EBro08_SQ007_D17_R root, 3 week, drought-stressed, cv Optic, EBro08
Hordeum vulgare subsp. vulgare cDNA clone
EBro08_SQ007_D17 5', mRNA sequence
Length = 743
Score = 37.3 bits (75), Expect = 0.032
Identities = 13/18 (72%), Positives = 15/18 (83%)
Frame = +2 / +3
Query: 5 GSNVQGYFAWSLLDNFEW 58
GSNV+GYF WS LD FE+
Sbjct: 684 GSNVRGYFVWSFLDVFEY 737
>gb|CD663528.1|CD663528 UCRHV18_05db04_b1 Drought-stressed Dicktoo barley epidermis cDNA
library Hordeum vulgare subsp. vulgare cDNA clone
UCRHV18_05db04, mRNA sequence
Length = 637
Score = 36.8 bits (74), Expect = 0.044
Identities = 13/26 (50%), Positives = 18/26 (69%)
Frame = +2 / -3
Query: 44 DNFEWFAGFTERYGIVYVDRNNNCTR 121
DN+EW G+ ++G+V VDR NN R
Sbjct: 635 DNWEWADGYGPKFGLVGVDRANNLAR 558
>gb|AL511146.1|AL511146 AL511146 Hordeum vulgare Barke developing caryopsis (3.-15.DAP)
Hordeum vulgare subsp. vulgare cDNA clone HY07C10u 3',
mRNA sequence
Length = 531
Score = 32.7 bits (65), Expect(2) = 0.054
Identities = 11/26 (42%), Positives = 14/26 (53%)
Frame = -2 / +2
Query: 152 LSTTWQTPSCSACSYCCGRRRQCHNV 75
L W + S S CS+ C RRQ H +
Sbjct: 152 LEVNWPSGSISCCSFACRSRRQLHRL 229
Score = 20.3 bits (38), Expect(2) = 0.054
Identities = 8/11 (72%), Positives = 8/11 (72%)
Frame = -1 / +1
Query: 261 FGSKXXSFYGL 229
FGSK SFY L
Sbjct: 16 FGSKGYSFYWL 48
>gb|CK123812.1|CK123812 BES1824105g21 BES1824 Hordeum vulgare subsp. vulgare cDNA clone
MPMGp2010G215 5-PRIME, mRNA sequence
Length = 564
Score = 32.7 bits (65), Expect(2) = 0.058
Identities = 11/26 (42%), Positives = 14/26 (53%)
Frame = -2 / -2
Query: 152 LSTTWQTPSCSACSYCCGRRRQCHNV 75
L W + S S CS+ C RRQ H +
Sbjct: 428 LEVNWPSGSISCCSFACRSRRQLHRL 351
Score = 20.3 bits (38), Expect(2) = 0.058
Identities = 8/11 (72%), Positives = 8/11 (72%)
Frame = -1 / -1
Query: 261 FGSKXXSFYGL 229
FGSK SFY L
Sbjct: 564 FGSKGYSFYWL 532
>gb|AL507887.1|AL507887 AL507887 Hordeum vulgare Barke developing caryopsis (3.-15.DAP)
Hordeum vulgare subsp. vulgare cDNA clone HY07C10V 5',
mRNA sequence
Length = 581
Score = 32.7 bits (65), Expect(2) = 0.060
Identities = 11/26 (42%), Positives = 14/26 (53%)
Frame = -2 / -3
Query: 152 LSTTWQTPSCSACSYCCGRRRQCHNV 75
L W + S S CS+ C RRQ H +
Sbjct: 429 LEVNWPSGSISCCSFACRSRRQLHRL 352
Score = 20.3 bits (38), Expect(2) = 0.060
Identities = 8/11 (72%), Positives = 8/11 (72%)
Frame = -1 / -2
Query: 261 FGSKXXSFYGL 229
FGSK SFY L
Sbjct: 565 FGSKGYSFYWL 533
>gb|BQ764277.1|BQ764277 EBan01_SQ005_K10_R anther, yellow stage, no treatment, cv Optic,
EBan01 Hordeum vulgare subsp. vulgare cDNA clone
EBan01_SQ005_K10 5', mRNA sequence
Length = 663
Score = 36.3 bits (73), Expect = 0.060
Identities = 11/31 (35%), Positives = 19/31 (61%)
Frame = +2 / +1
Query: 2 LGSNVQGYFAWSLLDNFEWFAGFTERYGIVY 94
+G V GY W+ DN+EW G+ ++G+ +
Sbjct: 523 MGVRVLGYLFWTTSDNWEWADGYGPKFGLCW 615
>gb|BE215503.2|BE215503 HV_CEb0006P17f Hordeum vulgare seedling green leaf EST library
HVcDNA0005 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEb0006P17f, mRNA sequence
Length = 902
Score = 29.5 bits (58), Expect(2) = 0.11
Identities = 11/26 (42%), Positives = 15/26 (57%)
Frame = +2 / +3
Query: 23 YFAWSLLDNFEWFAGFTERYGIVYVD 100
YF WS LD FE+ G+ + + VD
Sbjct: 3 YFVWSFLDVFEYLFGYRMGFILYSVD 80
Score = 23.5 bits (45), Expect(2) = 0.11
Identities = 8/14 (57%), Positives = 9/14 (64%)
Frame = +2 / +3
Query: 116 TRYMKESAKWLKEF 157
TRY + SAKW F
Sbjct: 99 TRYQRHSAKWFAIF 140
>gb|BI958216.1|BI958216 HVSMEn0013O15f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0013O15f, mRNA sequence
Length = 648
Score = 35.4 bits (71), Expect = 0.11
Identities = 11/21 (52%), Positives = 17/21 (80%)
Frame = +2 / +3
Query: 5 GSNVQGYFAWSLLDNFEWFAG 67
G+ ++GYF W+LL++FEW G
Sbjct: 564 GT*LRGYFVWALLNDFEWTLG 626
>gb|BU981780.1|BU981780 HA24J23r HA Hordeum vulgare subsp. vulgare cDNA clone HA24J23
5-PRIME, mRNA sequence
Length = 600
Score = 32.7 bits (65), Expect(2) = 0.20
Identities = 11/26 (42%), Positives = 14/26 (53%)
Frame = -2 / -2
Query: 152 LSTTWQTPSCSACSYCCGRRRQCHNV 75
L W + S S CS+ C RRQ H +
Sbjct: 452 LEVNWPSGSISCCSFACRSRRQLHRL 375
Score = 18.5 bits (34), Expect(2) = 0.20
Identities = 8/15 (53%), Positives = 9/15 (60%)
Frame = -1 / -1
Query: 273 KEXXFGSKXXSFYGL 229
+E GSK SFY L
Sbjct: 600 REGVDGSKGYSFYWL 556
>gb|BE231065.1|BE231065 HVSMEg0016D19f Hordeum vulgare pre-anthesis spike EST library
HVcDNA0008 (white to yellow anther) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEg0016D19f, mRNA sequence
Length = 887
Score = 34.5 bits (69), Expect = 0.21
Identities = 12/15 (80%), Positives = 13/15 (86%)
Frame = +2 / +2
Query: 5 GSNVQGYFAWSLLDN 49
G+NV GYF WSLLDN
Sbjct: 677 GANVVGYFGWSLLDN 721
>gb|BQ657771.1|BQ657771 HA07B03u HA Hordeum vulgare subsp. vulgare cDNA clone HA07B03
3-PRIME, mRNA sequence
Length = 462
Score = 32.7 bits (65), Expect(2) = 0.29
Identities = 11/26 (42%), Positives = 14/26 (53%)
Frame = -2 / +2
Query: 152 LSTTWQTPSCSACSYCCGRRRQCHNV 75
L W + S S CS+ C RRQ H +
Sbjct: 134 LEVNWPSGSISCCSFACRSRRQLHRL 211
Score = 17.6 bits (32), Expect(2) = 0.29
Identities = 7/10 (70%), Positives = 7/10 (70%)
Frame = -1 / +1
Query: 258 GSKXXSFYGL 229
GSK SFY L
Sbjct: 1 GSKGYSFYWL 30
>gb|BQ460161.1|BQ460161 HA07B03r HA Hordeum vulgare subsp. vulgare cDNA clone HA07B03
5-PRIME, mRNA sequence
Length = 507
Score = 32.7 bits (65), Expect(2) = 0.31
Identities = 11/26 (42%), Positives = 14/26 (53%)
Frame = -2 / -2
Query: 152 LSTTWQTPSCSACSYCCGRRRQCHNV 75
L W + S S CS+ C RRQ H +
Sbjct: 374 LEVNWPSGSISCCSFACRSRRQLHRL 297
Score = 17.6 bits (32), Expect(2) = 0.31
Identities = 7/10 (70%), Positives = 7/10 (70%)
Frame = -1 / -1
Query: 258 GSKXXSFYGL 229
GSK SFY L
Sbjct: 507 GSKGYSFYWL 478
>gb|BQ460163.1|BQ460163 HA07A15r HA Hordeum vulgare subsp. vulgare cDNA clone HA07A15
5-PRIME, mRNA sequence
Length = 507
Score = 32.7 bits (65), Expect(2) = 0.31
Identities = 11/26 (42%), Positives = 14/26 (53%)
Frame = -2 / -2
Query: 152 LSTTWQTPSCSACSYCCGRRRQCHNV 75
L W + S S CS+ C RRQ H +
Sbjct: 374 LEVNWPSGSISCCSFACRSRRQLHRL 297
Score = 17.6 bits (32), Expect(2) = 0.31
Identities = 7/10 (70%), Positives = 7/10 (70%)
Frame = -1 / -1
Query: 258 GSKXXSFYGL 229
GSK SFY L
Sbjct: 507 GSKGYSFYWL 478
>gb|BU982768.1|BU982768 HA27I22r HA Hordeum vulgare subsp. vulgare cDNA clone HA27I22
5-PRIME, mRNA sequence
Length = 578
Score = 32.7 bits (65), Expect(2) = 0.36
Identities = 11/26 (42%), Positives = 14/26 (53%)
Frame = -2 / -2
Query: 152 LSTTWQTPSCSACSYCCGRRRQCHNV 75
L W + S S CS+ C RRQ H +
Sbjct: 445 LEVNWPSGSISCCSFACRSRRQLHRL 368
Score = 17.6 bits (32), Expect(2) = 0.36
Identities = 7/10 (70%), Positives = 7/10 (70%)
Frame = -1 / -1
Query: 258 GSKXXSFYGL 229
GSK SFY L
Sbjct: 578 GSKGYSFYWL 549
>gb|BM816954.1|BM816954 HC05C03_T3.ab1 HC Hordeum vulgare subsp. vulgare cDNA clone
HC05C03_T3.ab1, mRNA sequence
Length = 862
Score = 33.6 bits (67), Expect = 0.40
Identities = 13/26 (50%), Positives = 15/26 (57%)
Frame = -2 / -2
Query: 116 CSYCCGRRRQCHNVR*SRQTIQSCPA 39
C CCGRRR C R S + SCP+
Sbjct: 372 CCCCCGRRRPCGPRRPSCPSSSSCPS 295
>gb|AY681974.1| Hordeum vulgare subsp. vulgare dehydrin 13 (Dhn13) gene, complete cds
Length = 2174
Score = 33.6 bits (67), Expect = 0.40
Identities = 13/26 (50%), Positives = 15/26 (57%)
Frame = -2 / -2
Query: 116 CSYCCGRRRQCHNVR*SRQTIQSCPA 39
C CCGRRR C R S + SCP+
Sbjct: 1600 CCCCCGRRRPCGPRRPSCPSSSSCPS 1523
>gb|BM374101.1|BM374101 EBma03_SQ003_K10_R maternal, 8 DPA, no treatment, cv Optic, EBma03
Hordeum vulgare subsp. vulgare cDNA clone
EBma03_SQ003_K10 5', mRNA sequence
Length = 393
Score = 33.6 bits (67), Expect = 0.40
Identities = 13/26 (50%), Positives = 15/26 (57%)
Frame = -2 / -3
Query: 116 CSYCCGRRRQCHNVR*SRQTIQSCPA 39
C CCGRRR C R S + SCP+
Sbjct: 139 CCCCCGRRRPCGPRRPSCPSSSSCPS 62
>gb|AJ433381.1|AJ433381 AJ433381 S00002 Hordeum vulgare subsp. vulgare cDNA clone
S0000200017H04F1, mRNA sequence
Length = 360
Score = 33.6 bits (67), Expect = 0.40
Identities = 13/26 (50%), Positives = 15/26 (57%)
Frame = -2 / -3
Query: 116 CSYCCGRRRQCHNVR*SRQTIQSCPA 39
C CCGRRR C R S + SCP+
Sbjct: 85 CCCCCGRRRPCGPRRPSCPSSSSCPS 8
>gb|BJ469496.1|BJ469496 BJ469496 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal23g18 5', mRNA sequence
Length = 654
Score = 33.6 bits (67), Expect = 0.40
Identities = 13/26 (50%), Positives = 15/26 (57%)
Frame = -2 / -3
Query: 116 CSYCCGRRRQCHNVR*SRQTIQSCPA 39
C CCGRRR C R S + SCP+
Sbjct: 358 CCCCCGRRRPCGPRRPSCPSSSSCPS 281
>gb|BJ469498.1|BJ469498 BJ469498 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal23g22 5', mRNA sequence
Length = 478
Score = 33.6 bits (67), Expect = 0.40
Identities = 13/26 (50%), Positives = 15/26 (57%)
Frame = -2 / -2
Query: 116 CSYCCGRRRQCHNVR*SRQTIQSCPA 39
C CCGRRR C R S + SCP+
Sbjct: 354 CCCCCGRRRPCGPRRPSCPSSSSCPS 277
>gb|BJ474793.1|BJ474793 BJ474793 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal22h02 3', mRNA sequence
Length = 668
Score = 33.6 bits (67), Expect = 0.40
Identities = 13/26 (50%), Positives = 15/26 (57%)
Frame = -2 / +1
Query: 116 CSYCCGRRRQCHNVR*SRQTIQSCPA 39
C CCGRRR C R S + SCP+
Sbjct: 352 CCCCCGRRRPCGPRRPSCPSSSSCPS 429
>gb|BJ474905.1|BJ474905 BJ474905 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal23g18 3', mRNA sequence
Length = 607
Score = 33.6 bits (67), Expect = 0.40
Identities = 13/26 (50%), Positives = 15/26 (57%)
Frame = -2 / +2
Query: 116 CSYCCGRRRQCHNVR*SRQTIQSCPA 39
C CCGRRR C R S + SCP+
Sbjct: 353 CCCCCGRRRPCGPRRPSCPSSSSCPS 430
>gb|BQ658245.1|BQ658245 HB09P08w BC Hordeum vulgare subsp. vulgare cDNA clone HB09P08
3-PRIME, mRNA sequence
Length = 674
Score = 33.6 bits (67), Expect = 0.40
Identities = 13/32 (40%), Positives = 16/32 (50%)
Frame = +2 / -1
Query: 89 VYVDRNNNCTRYMKESAKWLKEFNTAKKPSKK 184
VYVD N +R+ K SA W F + P K
Sbjct: 674 VYVDYKNGLSRHPKASAMWFSRFLNGEAPDSK 579
>gb|BQ740128.1|BQ740128 HC108F02 HC Hordeum vulgare subsp. vulgare cDNA clone HC108F02,
mRNA sequence
Length = 555
Score = 33.6 bits (67), Expect = 0.40
Identities = 13/26 (50%), Positives = 15/26 (57%)
Frame = -2 / -3
Query: 116 CSYCCGRRRQCHNVR*SRQTIQSCPA 39
C CCGRRR C R S + SCP+
Sbjct: 253 CCCCCGRRRPCGPRRPSCPSSSSCPS 176
>gb|BM097437.2|BM097437 EBro05_SQ003_E03_R root, 3 week, reduced light, cv Optic, EBro05
Hordeum vulgare subsp. vulgare cDNA clone
EBro05_SQ003_E03 5', mRNA sequence
Length = 416
Score = 33.6 bits (67), Expect = 0.40
Identities = 13/26 (50%), Positives = 15/26 (57%)
Frame = -2 / -3
Query: 116 CSYCCGRRRQCHNVR*SRQTIQSCPA 39
C CCGRRR C R S + SCP+
Sbjct: 372 CCCCCGRRRPCGPRRPSCPSSSSCPS 295
>gb|BQ757445.1|BQ757445 EBem10_SQ004_C10_R embryo, 2 Day germination, no treatment, cv
Optic, EBem10 Hordeum vulgare subsp. vulgare cDNA clone
EBem10_SQ004_C10 5', mRNA sequence
Length = 204
Score = 33.6 bits (67), Expect = 0.40
Identities = 13/26 (50%), Positives = 15/26 (57%)
Frame = -2 / -3
Query: 116 CSYCCGRRRQCHNVR*SRQTIQSCPA 39
C CCGRRR C R S + SCP+
Sbjct: 175 CCCCCGRRRPCGPRRPSCPSSSSCPS 98
>gb|BQ757940.1|BQ757940 EBem10_SQ005_M09_R embryo, 2 Day germination, no treatment, cv
Optic, EBem10 Hordeum vulgare subsp. vulgare cDNA clone
EBem10_SQ005_M09 5', mRNA sequence
Length = 307
Score = 33.6 bits (67), Expect = 0.40
Identities = 13/26 (50%), Positives = 15/26 (57%)
Frame = -2 / -2
Query: 116 CSYCCGRRRQCHNVR*SRQTIQSCPA 39
C CCGRRR C R S + SCP+
Sbjct: 102 CCCCCGRRRPCGPRRPSCPSSSSCPS 25
>gb|BQ757944.1|BQ757944 EBem10_SQ005_M13_R embryo, 2 Day germination, no treatment, cv
Optic, EBem10 Hordeum vulgare subsp. vulgare cDNA clone
EBem10_SQ005_M13 5', mRNA sequence
Length = 385
Score = 33.6 bits (67), Expect = 0.40
Identities = 13/26 (50%), Positives = 15/26 (57%)
Frame = -2 / -2
Query: 116 CSYCCGRRRQCHNVR*SRQTIQSCPA 39
C CCGRRR C R S + SCP+
Sbjct: 102 CCCCCGRRRPCGPRRPSCPSSSSCPS 25
>gb|BQ762984.1|BQ762984 EBro02_SQ006_D20 _R root, 3 week, hydroponic grown, low nitrogen,
cv Optic, EBro02 Hordeum vulgare subsp. vulgare cDNA
clone EBro02_SQ006_D20 5', mRNA sequence
Length = 368
Score = 33.6 bits (67), Expect = 0.40
Identities = 13/25 (52%), Positives = 14/25 (56%)
Frame = -2 / -1
Query: 116 CSYCCGRRRQCHNVR*SRQTIQSCP 42
C CCGRRR C R S + SCP
Sbjct: 89 CCCCCGRRRPCGPRRPSCHSSSSCP 15
>gb|BQ765784.1|BQ765784 EBro03_SQ008_L05_R root, 3 week, waterlogged, cv Optic, EBro03
Hordeum vulgare subsp. vulgare cDNA clone
EBro03_SQ008_L05 5', mRNA sequence
Length = 421
Score = 33.6 bits (67), Expect = 0.40
Identities = 13/26 (50%), Positives = 15/26 (57%)
Frame = -2 / -3
Query: 116 CSYCCGRRRQCHNVR*SRQTIQSCPA 39
C CCGRRR C R S + SCP+
Sbjct: 146 CCCCCGRRRPCGPRRPSCPSSSSCPS 69
>gb|BQ767341.1|BQ767341 EBro08_SQ008_K13_R root, 3 week, drought-stressed, cv Optic, EBro08
Hordeum vulgare subsp. vulgare cDNA clone
EBro08_SQ008_K13 5', mRNA sequence
Length = 366
Score = 33.6 bits (67), Expect = 0.40
Identities = 13/26 (50%), Positives = 15/26 (57%)
Frame = -2 / -2
Query: 116 CSYCCGRRRQCHNVR*SRQTIQSCPA 39
C CCGRRR C R S + SCP+
Sbjct: 83 CCCCCGRRRPCGPRRPSCPSSSSCPS 6
>gb|BU969231.1|BU969231 HB10O24r BC Hordeum vulgare subsp. vulgare cDNA clone HB10O24
5-PRIME, mRNA sequence
Length = 438
Score = 33.6 bits (67), Expect = 0.40
Identities = 13/26 (50%), Positives = 15/26 (57%)
Frame = -2 / -2
Query: 116 CSYCCGRRRQCHNVR*SRQTIQSCPA 39
C CCGRRR C R S + SCP+
Sbjct: 350 CCCCCGRRRPCGPRRPSCPSSSSCPS 273
>gb|BU994424.1|BU994424 HM07A11r HM Hordeum vulgare subsp. vulgare cDNA clone HM07A11
5-PRIME, mRNA sequence
Length = 581
Score = 33.6 bits (67), Expect = 0.40
Identities = 13/26 (50%), Positives = 15/26 (57%)
Frame = -2 / -2
Query: 116 CSYCCGRRRQCHNVR*SRQTIQSCPA 39
C CCGRRR C R S + SCP+
Sbjct: 355 CCCCCGRRRPCGPRRPSCPSSSSCPS 278
>gb|BU994720.1|BU994720 HM07P14r HM Hordeum vulgare subsp. vulgare cDNA clone HM07P14
5-PRIME, mRNA sequence
Length = 617
Score = 33.6 bits (67), Expect = 0.40
Identities = 13/26 (50%), Positives = 15/26 (57%)
Frame = -2 / -2
Query: 116 CSYCCGRRRQCHNVR*SRQTIQSCPA 39
C CCGRRR C R S + SCP+
Sbjct: 346 CCCCCGRRRPCGPRRPSCPSSSSCPS 269
>gb|BU995506.1|BU995506 HM10H09r HM Hordeum vulgare subsp. vulgare cDNA clone HM10H09
5-PRIME, mRNA sequence
Length = 420
Score = 33.6 bits (67), Expect = 0.40
Identities = 13/26 (50%), Positives = 15/26 (57%)
Frame = -2 / -2
Query: 116 CSYCCGRRRQCHNVR*SRQTIQSCPA 39
C CCGRRR C R S + SCP+
Sbjct: 176 CCCCCGRRRPCGPRRPSCPSSSSCPS 99
>gb|CA025417.1|CA025417 HZ52B17r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ52B17
5-PRIME, mRNA sequence
Length = 529
Score = 33.6 bits (67), Expect = 0.40
Identities = 13/26 (50%), Positives = 15/26 (57%)
Frame = -2 / -3
Query: 116 CSYCCGRRRQCHNVR*SRQTIQSCPA 39
C CCGRRR C R S + SCP+
Sbjct: 353 CCCCCGRRRPCGPRRPSCPSSSSCPS 276
>gb|CB879946.1|CB879946 HM05A11w HM Hordeum vulgare subsp. vulgare cDNA clone HM05A11
3-PRIME, mRNA sequence
Length = 569
Score = 33.6 bits (67), Expect = 0.40
Identities = 13/26 (50%), Positives = 15/26 (57%)
Frame = -2 / +3
Query: 116 CSYCCGRRRQCHNVR*SRQTIQSCPA 39
C CCGRRR C R S + SCP+
Sbjct: 228 CCCCCGRRRPCGPRRPSCPSSSSCPS 305
>gb|CB881628.1|CB881628 HM10G10w HM Hordeum vulgare subsp. vulgare cDNA clone HM10G10
3-PRIME, mRNA sequence
Length = 458
Score = 33.6 bits (67), Expect = 0.40
Identities = 13/26 (50%), Positives = 15/26 (57%)
Frame = -2 / +2
Query: 116 CSYCCGRRRQCHNVR*SRQTIQSCPA 39
C CCGRRR C R S + SCP+
Sbjct: 245 CCCCCGRRRPCGPRRPSCPSSSSCPS 322
>gb|CD663392.1|CD663392 UCRHV18_05bd03_b1 Drought-stressed Dicktoo barley epidermis cDNA
library Hordeum vulgare subsp. vulgare cDNA clone
UCRHV18_05bd03, mRNA sequence
Length = 578
Score = 33.6 bits (67), Expect = 0.40
Identities = 13/26 (50%), Positives = 15/26 (57%)
Frame = -2 / +3
Query: 116 CSYCCGRRRQCHNVR*SRQTIQSCPA 39
C CCGRRR C R S + SCP+
Sbjct: 342 CCCCCGRRRPCGPRRPSCPSSSSCPS 419
>gb|CK125866.1|CK125866 BES1824111A1e10 BES1824 Hordeum vulgare subsp. vulgare cDNA clone
MPMGp2010E1011 5-PRIME, mRNA sequence
Length = 617
Score = 33.6 bits (67), Expect = 0.40
Identities = 13/26 (50%), Positives = 15/26 (57%)
Frame = -2 / -2
Query: 116 CSYCCGRRRQCHNVR*SRQTIQSCPA 39
C CCGRRR C R S + SCP+
Sbjct: 370 CCCCCGRRRPCGPRRPSCPSSSSCPS 293
>gb|AL508517.1|AL508517 AL508517 Hordeum vulgare Barke developing caryopsis (3.-15.DAP)
Hordeum vulgare subsp. vulgare cDNA clone HY08P24V 5',
mRNA sequence
Length = 700
Score = 27.2 bits (53), Expect(2) = 0.43
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = -2 / +2
Query: 65 RQTIQSCPAETKRSSLAHLIP 3
R+ Q C A +RS +AHL+P
Sbjct: 83 RRCCQRCTAWARRSLIAHLLP 145
Score = 23.1 bits (44), Expect(2) = 0.43
Identities = 7/13 (53%), Positives = 9/13 (69%)
Frame = -2 / +2
Query: 122 SACSYCCGRRRQC 84
++C CC RRR C
Sbjct: 56 TSCCCCCCRRRCC 94
>gb|BF256979.2|BF256979 HVSMEf0011I13f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEf0011I13f, mRNA sequence
Length = 584
Score = 33.1 bits (66), Expect = 0.55
Identities = 16/45 (35%), Positives = 25/45 (55%)
Frame = -2 / +2
Query: 155 TLSTTWQTPSCSACSYCCGRRRQCHNVR*SRQTIQSCPAETKRSS 21
TLST+ ++P+ + C+ C RRR C + S + S T RS+
Sbjct: 251 TLSTSPRSPTSTPCTSCTTRRRSCSSSATSTS*LISGQETTSRST 385
>gb|BE422314.1|BE422314 HWM022cH.10r ITEC HWM Barley Leaf Library Hordeum vulgare subsp.
vulgare cDNA clone HWM022cH.10, mRNA sequence
Length = 1250
Score = 32.7 bits (65), Expect = 0.76
Identities = 16/45 (35%), Positives = 25/45 (55%)
Frame = -2 / +2
Query: 155 TLSTTWQTPSCSACSYCCGRRRQCHNVR*SRQTIQSCPAETKRSS 21
TLST+ ++P+ + C+ C RRR C + S + S T RS+
Sbjct: 323 TLSTSPRSPTSTPCTSCTTRRRSCSSSATSTS*LISGQETTTRST 457
>gb|AL509522.1|AL509522 AL509522 Hordeum vulgare Barke developing caryopsis (3.-15.DAP)
Hordeum vulgare subsp. vulgare cDNA clone HY02B03u 3',
mRNA sequence
Length = 526
Score = 32.7 bits (65), Expect = 0.76
Identities = 16/45 (35%), Positives = 25/45 (55%)
Frame = -2 / +3
Query: 155 TLSTTWQTPSCSACSYCCGRRRQCHNVR*SRQTIQSCPAETKRSS 21
TLST+ ++P+ + C+ C RRR C + S + S T RS+
Sbjct: 246 TLSTSPRSPTSTPCTSCTTRRRSCSSSATSTS*LISGQETTTRST 380
>gb|BI951160.1|BI951160 HVSMEl0024M10f Hordeum vulgare spike EST library HVcDNA0012
(Fusarium infected) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEl0024M10f, mRNA sequence
Length = 880
Score = 32.7 bits (65), Expect = 0.76
Identities = 16/45 (35%), Positives = 25/45 (55%)
Frame = -2 / +1
Query: 155 TLSTTWQTPSCSACSYCCGRRRQCHNVR*SRQTIQSCPAETKRSS 21
TLST+ ++P+ + C+ C RRR C + S + S T RS+
Sbjct: 250 TLSTSPRSPTSTPCTSCTTRRRSCSSSATSTS*LISGQETTTRST 384
>gb|BG369895.2|BG369895 HVSMEi0026H07f Hordeum vulgare 20 DAP spike EST library HVcDNA0010
(20 DAP) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEi0026H07f, mRNA sequence
Length = 679
Score = 32.7 bits (65), Expect = 0.76
Identities = 16/45 (35%), Positives = 25/45 (55%)
Frame = -2 / +1
Query: 155 TLSTTWQTPSCSACSYCCGRRRQCHNVR*SRQTIQSCPAETKRSS 21
TLST+ ++P+ + C+ C RRR C + S + S T RS+
Sbjct: 241 TLSTSPRSPTSTPCTSCTTRRRSCSSSATSTS*LISGQETTTRST 375
>gb|BJ450878.1|BJ450878 BJ450878 K. Sato unpublished cDNA library, cv. Akashinriki
vegetative stage leaves Hordeum vulgare subsp. vulgare
cDNA clone baak31l12 5', mRNA sequence
Length = 540
Score = 32.7 bits (65), Expect = 0.76
Identities = 16/45 (35%), Positives = 25/45 (55%)
Frame = -2 / +1
Query: 155 TLSTTWQTPSCSACSYCCGRRRQCHNVR*SRQTIQSCPAETKRSS 21
TLST+ ++P+ + C+ C RRR C + S + S T RS+
Sbjct: 226 TLSTSPRSPTSTPCTSCTTRRRSCSSSATSTS*LISGQETTTRST 360
>gb|BJ458366.1|BJ458366 BJ458366 K. Sato unpublished cDNA library, cv. Akashinriki
vegetative stage leaves Hordeum vulgare subsp. vulgare
cDNA clone baak31l12 3', mRNA sequence
Length = 591
Score = 32.7 bits (65), Expect = 0.76
Identities = 16/45 (35%), Positives = 25/45 (55%)
Frame = -2 / -2
Query: 155 TLSTTWQTPSCSACSYCCGRRRQCHNVR*SRQTIQSCPAETKRSS 21
TLST+ ++P+ + C+ C RRR C + S + S T RS+
Sbjct: 419 TLSTSPRSPTSTPCTSCTTRRRSCSSSATSTS*LISGQETTTRST 285
>gb|BQ460512.1|BQ460512 HA09F17r HA Hordeum vulgare subsp. vulgare cDNA clone HA09F17
5-PRIME, mRNA sequence
Length = 587
Score = 32.7 bits (65), Expect = 0.76
Identities = 11/26 (42%), Positives = 14/26 (53%)
Frame = -2 / -2
Query: 152 LSTTWQTPSCSACSYCCGRRRQCHNV 75
L W + S S CS+ C RRQ H +
Sbjct: 457 LEVNWPSGSISCCSFACRSRRQLHRL 380
>gb|BM100420.2|BM100420 EBma01_SQ005_C18_R maternal, 4 DPA, no treatment, cv Optic, EBma01
Hordeum vulgare subsp. vulgare cDNA clone
EBma01_SQ005_C18 5', mRNA sequence
Length = 553
Score = 32.7 bits (65), Expect = 0.76
Identities = 16/45 (35%), Positives = 25/45 (55%)
Frame = -2 / +2
Query: 155 TLSTTWQTPSCSACSYCCGRRRQCHNVR*SRQTIQSCPAETKRSS 21
TLST+ ++P+ + C+ C RRR C + S + S T RS+
Sbjct: 245 TLSTSPRSPTSTPCTSCTTRRRSCSSSATSTS*LISGQETTTRST 379
>gb|BQ763711.1|BQ763711 EBro03_SQ005_P01_R root, 3 week, waterlogged, cv Optic, EBro03
Hordeum vulgare subsp. vulgare cDNA clone
EBro03_SQ005_P01 5', mRNA sequence
Length = 604
Score = 32.7 bits (65), Expect = 0.76
Identities = 16/45 (35%), Positives = 25/45 (55%)
Frame = -2 / +2
Query: 155 TLSTTWQTPSCSACSYCCGRRRQCHNVR*SRQTIQSCPAETKRSS 21
TLST+ ++P+ + C+ C RRR C + S + S T RS+
Sbjct: 251 TLSTSPRSPTSTPCTSCTTRRRSCSSSATSTS*LISGQETTTRST 385
>gb|BU972104.1|BU972104 HB20J23r BC Hordeum vulgare subsp. vulgare cDNA clone HB20J23
5-PRIME, mRNA sequence
Length = 579
Score = 32.7 bits (65), Expect = 0.76
Identities = 16/45 (35%), Positives = 25/45 (55%)
Frame = -2 / +3
Query: 155 TLSTTWQTPSCSACSYCCGRRRQCHNVR*SRQTIQSCPAETKRSS 21
TLST+ ++P+ + C+ C RRR C + S + S T RS+
Sbjct: 261 TLSTSPRSPTSTPCTSCTTRRRSCSSSATSTS*LISGQETTTRST 395
>gb|BU980153.1|BU980153 HA18N04r HA Hordeum vulgare subsp. vulgare cDNA clone HA18N04
5-PRIME, mRNA sequence
Length = 541
Score = 32.7 bits (65), Expect = 0.76
Identities = 11/26 (42%), Positives = 14/26 (53%)
Frame = -2 / -1
Query: 152 LSTTWQTPSCSACSYCCGRRRQCHNV 75
L W + S S CS+ C RRQ H +
Sbjct: 457 LEVNWPSGSISCCSFACRSRRQLHRL 380
>gb|BU980951.1|BU980951 HA22C23r HA Hordeum vulgare subsp. vulgare cDNA clone HA22C23
5-PRIME, mRNA sequence
Length = 583
Score = 32.7 bits (65), Expect = 0.76
Identities = 16/45 (35%), Positives = 25/45 (55%)
Frame = -2 / +1
Query: 155 TLSTTWQTPSCSACSYCCGRRRQCHNVR*SRQTIQSCPAETKRSS 21
TLST+ ++P+ + C+ C RRR C + S + S T RS+
Sbjct: 265 TLSTSPRSPTSTPCTSCTTRRRSCSSSATSTS*LISGQETTTRST 399
>gb|BU981379.1|BU981379 HA23H02r HA Hordeum vulgare subsp. vulgare cDNA clone HA23H02
5-PRIME, mRNA sequence
Length = 509
Score = 32.7 bits (65), Expect = 0.76
Identities = 11/26 (42%), Positives = 14/26 (53%)
Frame = -2 / -2
Query: 152 LSTTWQTPSCSACSYCCGRRRQCHNV 75
L W + S S CS+ C RRQ H +
Sbjct: 445 LEVNWPSGSISCCSFACRSRRQLHRL 368
>gb|BU982312.1|BU982312 HA26C08r HA Hordeum vulgare subsp. vulgare cDNA clone HA26C08
5-PRIME, mRNA sequence
Length = 442
Score = 32.7 bits (65), Expect = 0.76
Identities = 11/26 (42%), Positives = 14/26 (53%)
Frame = -2 / -2
Query: 152 LSTTWQTPSCSACSYCCGRRRQCHNV 75
L W + S S CS+ C RRQ H +
Sbjct: 435 LEVNWPSGSISCCSFACRSRRQLHRL 358
>gb|BU982447.1|BU982447 HA26J08r HA Hordeum vulgare subsp. vulgare cDNA clone HA26J08
5-PRIME, mRNA sequence
Length = 451
Score = 32.7 bits (65), Expect = 0.76
Identities = 11/26 (42%), Positives = 14/26 (53%)
Frame = -2 / -2
Query: 152 LSTTWQTPSCSACSYCCGRRRQCHNV 75
L W + S S CS+ C RRQ H +
Sbjct: 444 LEVNWPSGSISCCSFACRSRRQLHRL 367
>gb|BU982639.1|BU982639 HA27C13r HA Hordeum vulgare subsp. vulgare cDNA clone HA27C13
5-PRIME, mRNA sequence
Length = 536
Score = 32.7 bits (65), Expect = 0.76
Identities = 11/26 (42%), Positives = 14/26 (53%)
Frame = -2 / -2
Query: 152 LSTTWQTPSCSACSYCCGRRRQCHNV 75
L W + S S CS+ C RRQ H +
Sbjct: 457 LEVNWPSGSISCCSFACRSRRQLHRL 380
>gb|BU983230.1|BU983230 HA28P13r HA Hordeum vulgare subsp. vulgare cDNA clone HA28P13
5-PRIME, mRNA sequence
Length = 571
Score = 32.7 bits (65), Expect = 0.76
Identities = 11/26 (42%), Positives = 14/26 (53%)
Frame = -2 / -1
Query: 152 LSTTWQTPSCSACSYCCGRRRQCHNV 75
L W + S S CS+ C RRQ H +
Sbjct: 439 LEVNWPSGSISCCSFACRSRRQLHRL 362
>gb|CA011702.1|CA011702 HT03F02r HT Hordeum vulgare subsp. vulgare cDNA clone HT03F02
5-PRIME, mRNA sequence
Length = 608
Score = 32.7 bits (65), Expect = 0.76
Identities = 16/45 (35%), Positives = 25/45 (55%)
Frame = -2 / +3
Query: 155 TLSTTWQTPSCSACSYCCGRRRQCHNVR*SRQTIQSCPAETKRSS 21
TLST+ ++P+ + C+ C RRR C + S + S T RS+
Sbjct: 261 TLSTSPRSPTSTPCTSCTTRRRSCSSSATSTS*LISGQETTTRST 395
>dbj|AB011268.1| Hordeum vulgare hvnas5-2 mRNA for nicotianamine Synthase 5-2,
complete cds
Length = 1021
Score = 32.7 bits (65), Expect = 0.76
Identities = 11/24 (45%), Positives = 12/24 (50%)
Frame = -2 / +1
Query: 155 TLSTTWQTPSCSACSYCCGRRRQC 84
T +TWQ CS C GR R C
Sbjct: 658 TWGSTWQMGRCSCAKRCTGRERSC 729
>gb|BE193844.2|BE193844 HVSMEh0082K24f Hordeum vulgare 5-45 DAP spike EST library
HVcDNA0009 (5 to 45 DAP) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEh0082K24f, mRNA sequence
Length = 749
Score = 25.4 bits (49), Expect(2) = 1.2
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = -3 / -3
Query: 214 GPRFLSWRKNLLAGLFRGVELFQPL 140
GP FLS +KN+ + G E F PL
Sbjct: 714 GPPFLSPKKNVPEKIALGEESFLPL 640
Score = 24.4 bits (47), Expect(2) = 1.2
Identities = 7/11 (63%), Positives = 7/11 (63%)
Frame = -2 / -2
Query: 131 PSCSACSYCCG 99
PSC C CCG
Sbjct: 277 PSCCPCPDCCG 245
>gb|BM442229.2|BM442229 EBan01_SQ002_J13_R anther, yellow stage, no treatment, cv Optic,
EBan01 Hordeum vulgare subsp. vulgare cDNA clone
EBan01_SQ002_J13 5', mRNA sequence
Length = 625
Score = 24.9 bits (48), Expect(2) = 1.3
Identities = 6/10 (60%), Positives = 8/10 (80%)
Frame = -2 / -1
Query: 128 SCSACSYCCG 99
+C CS+CCG
Sbjct: 37 ACCCCSWCCG 8
Score = 23.5 bits (45), Expect(2) = 1.3
Identities = 10/26 (38%), Positives = 12/26 (46%)
Frame = -2 / -2
Query: 194 A*ESSCWAFSRC*TLSTTWQTPSCSA 117
+* CW C T S T SCS+
Sbjct: 450 S*HDGCWDSPGCETQSCTGSKTSCSS 373
>gb|BM817293.1|BM817293 HC108B12_SK.ab1 HC Hordeum vulgare subsp. vulgare cDNA clone
HC108B12_SK.ab1 similar to amino acid transporter-like
protein [Arabidopsis thaliana], mRNA sequence
Length = 877
Score = 30.9 bits (61), Expect = 2.7
Identities = 10/19 (52%), Positives = 11/19 (57%)
Frame = -2 / +1
Query: 134 TPSCSACSYCCGRRRQCHN 78
T SCS C +CC CHN
Sbjct: 22 TRSCSRCDFCCYYCWDCHN 78
>gb|AL500698.1|AL500698 AL500698 Hordeum vulgare Barke roots Hordeum vulgare subsp. vulgare
cDNA clone HW01J02u 3', mRNA sequence
Length = 374
Score = 30.4 bits (60), Expect = 3.7
Identities = 11/27 (40%), Positives = 14/27 (51%)
Frame = -2 / -3
Query: 140 WQTPSCSACSYCCGRRRQCHNVR*SRQ 60
WQ S + + CCG QCH R R+
Sbjct: 276 WQEGSGTCEARCCGEEAQCHGSRXXRK 196
>gb|BG301062.1|BG301062 HVSMEb0019G03f Hordeum vulgare seedling shoot EST library
HVcDNA0002 (Dehydration stress) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEb0019G03f, mRNA sequence
Length = 820
Score = 30.4 bits (60), Expect = 3.7
Identities = 12/34 (35%), Positives = 22/34 (64%)
Frame = +2 / -3
Query: 80 YGIVYVDRNNNCTRYMKESAKWLKEFNTAKKPSK 181
YG V VD +++ ++M+ES +K+F+ P+K
Sbjct: 740 YGKVEVDWDHSMCKFMEESRDIIKQFSGTSLPNK 639
>gb|BG367462.1|BG367462 HVSMEi0012F15f Hordeum vulgare 20 DAP spike EST library HVcDNA0010
(20 DAP) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEi0012F15f, mRNA sequence
Length = 708
Score = 30.4 bits (60), Expect = 3.7
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = -2 / -2
Query: 152 LSTTWQTPSCSACSYCCGRRRQC 84
LS + + S S C YCC R R+C
Sbjct: 302 LSYSQRLQSSSCCCYCCHRDRKC 234
>gb|BI953897.1|BI953897 HVSMEm0015E13f Hordeum vulgare green seedling EST library
HVcDNA0014 (Blumeria infected) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEm0015E13f, mRNA sequence
Length = 639
Score = 30.4 bits (60), Expect = 3.7
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = -2 / +1
Query: 164 RC*TLSTTWQTPSCSACSYCCGRRRQ 87
RC T TTW T +CS + RRR+
Sbjct: 241 RCSTRRTTWWTATCSPTAASTARRRR 318
>gb|BI956147.1|BI956147 HVSMEm0025M24f Hordeum vulgare green seedling EST library
HVcDNA0014 (Blumeria infected) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEm0025M24f, mRNA sequence
Length = 676
Score = 30.4 bits (60), Expect = 3.7
Identities = 10/19 (52%), Positives = 11/19 (57%)
Frame = -2 / +1
Query: 134 TPSCSACSYCCGRRRQCHN 78
T SCS C +CC CHN
Sbjct: 424 TISCSRCDFCCYYCWDCHN 480
>gb|BE455570.3|BE455570 HVSMEg0017N21f Hordeum vulgare pre-anthesis spike EST library
HVcDNA0008 (white to yellow anther) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEg0017N21f, mRNA sequence
Length = 587
Score = 30.4 bits (60), Expect = 3.7
Identities = 15/42 (35%), Positives = 22/42 (52%)
Frame = +1 / +1
Query: 115 HALHEGVCQVVERVQHREKAQQEDSYASLKIGGLMXXVQPIK 240
HALH CQ ++ RE ++Q S AS+ M ++P K
Sbjct: 7 HALHPPFCQRESFLRGREGSEQPGS*ASMATIATMTMLKPAK 132
>gb|BE602567.3|BE602567 HVSMEh0100A07f Hordeum vulgare 5-45 DAP spike EST library
HVcDNA0009 (5 to 45 DAP) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEh0100A07f, mRNA sequence
Length = 728
Score = 30.4 bits (60), Expect = 3.7
Identities = 11/27 (40%), Positives = 14/27 (51%)
Frame = -2 / +3
Query: 140 WQTPSCSACSYCCGRRRQCHNVR*SRQ 60
WQ S + + CCG QCH R R+
Sbjct: 621 WQESSGTCEARCCGEEAQCHGSRCRRK 701
>gb|AV920026.1|AV920026 AV920026 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags8p22 3', mRNA sequence
Length = 413
Score = 30.4 bits (60), Expect = 3.7
Identities = 10/16 (62%), Positives = 11/16 (68%)
Frame = -2 / -3
Query: 152 LSTTWQTPSCSACSYC 105
+STTW C ACSYC
Sbjct: 54 VSTTWLVNLCYACSYC 7
>gb|AV934318.1|AV934318 AV934318 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal8a14 5', mRNA sequence
Length = 279
Score = 30.4 bits (60), Expect = 3.7
Identities = 13/36 (36%), Positives = 17/36 (47%)
Frame = -2 / +2
Query: 179 CWAFSRC*TLSTTWQTPSCSACSYCCGRRRQCHNVR 72
C A R T +T+W AC+ CC + HN R
Sbjct: 71 CSAPCREGTTATSWYEAEVPACNCCCTSSPRTHNPR 178
>gb|BQ740104.1|BQ740104 HC105B11 HC Hordeum vulgare subsp. vulgare cDNA clone HC105B11
similar to hypothetical protein [Oryza sativa], mRNA
sequence
Length = 634
Score = 30.4 bits (60), Expect = 3.7
Identities = 10/19 (52%), Positives = 11/19 (57%)
Frame = -2 / +3
Query: 134 TPSCSACSYCCGRRRQCHN 78
T SCS C +CC CHN
Sbjct: 135 TISCSRCDFCCYYCWDCHN 191
>gb|BM442251.2|BM442251 EBan01_SQ002_K14_R anther, yellow stage, no treatment, cv Optic,
EBan01 Hordeum vulgare subsp. vulgare cDNA clone
EBan01_SQ002_K14 5', mRNA sequence
Length = 320
Score = 30.4 bits (60), Expect = 3.7
Identities = 11/27 (40%), Positives = 14/27 (51%)
Frame = -2 / +1
Query: 140 WQTPSCSACSYCCGRRRQCHNVR*SRQ 60
WQ S + + CCG QCH R R+
Sbjct: 61 WQESSGTCEARCCGEEAQCHGSRCRRK 141
>gb|BM442782.2|BM442782 EBro02_SQ001_D09_R root, 3 week, hydroponic grown, low nitrogen, cv
Optic, EBro02 Hordeum vulgare subsp. vulgare cDNA clone
EBro02_SQ001_D09 5', mRNA sequence
Length = 457
Score = 30.4 bits (60), Expect = 3.7
Identities = 13/36 (36%), Positives = 17/36 (47%)
Frame = -2 / +2
Query: 179 CWAFSRC*TLSTTWQTPSCSACSYCCGRRRQCHNVR 72
C A R T +T+W AC+ CC + HN R
Sbjct: 290 CSAPCREGTTATSWYEAEVPACNCCCTSSPRTHNPR 397
>gb|BI777215.2|BI777215 EBro03_SQ002_H10_R root, 3 week, waterlogged, cv Optic, EBro03
Hordeum vulgare subsp. vulgare cDNA clone
EBro03_SQ002_H10 5', mRNA sequence
Length = 382
Score = 30.4 bits (60), Expect = 3.7
Identities = 12/26 (46%), Positives = 14/26 (53%)
Frame = -2 / -1
Query: 116 CSYCCGRRRQCHNVR*SRQTIQSCPA 39
C CCGRR C R S + SCP+
Sbjct: 364 CCCCCGRRGPCGPRRPSCPSSSSCPS 287
>gb|BU997534.1|BU997534 HI08E10r HI Hordeum vulgare subsp. vulgare cDNA clone HI08E10
5-PRIME, mRNA sequence
Length = 567
Score = 30.4 bits (60), Expect = 3.7
Identities = 9/29 (31%), Positives = 14/29 (48%)
Frame = -2 / +1
Query: 185 SSCWAFSRC*TLSTTWQTPSCSACSYCCG 99
++ W+ R S W+ P C + CCG
Sbjct: 232 TAAWSTGRSSPWSPPWRAPRCGTTTSCCG 318
>gb|CA007716.1|CA007716 HU08M06r HU Hordeum vulgare subsp. vulgare cDNA clone HU08M06
5-PRIME, mRNA sequence
Length = 527
Score = 30.4 bits (60), Expect = 3.7
Identities = 17/42 (40%), Positives = 19/42 (45%)
Frame = -2 / -1
Query: 182 SCWAFSRC*TLSTTWQTPSCSACSYCCGRRRQCHNVR*SRQT 57
SC SRC T +TP S C RRR+ R*S T
Sbjct: 359 SCRTASRCSRCPRTRRTPPASPAGTACRRRRRRTRWR*SAGT 234
>gb|CV061609.1|CV061609 BNEL6H2 Barley EST endosperm library Hordeum vulgare subsp. vulgare
cDNA clone BNEL6H2 5' similar to OJ1714_H10.10, mRNA
sequence
Length = 619
Score = 30.4 bits (60), Expect = 3.7
Identities = 13/36 (36%), Positives = 17/36 (47%)
Frame = -2 / +3
Query: 179 CWAFSRC*TLSTTWQTPSCSACSYCCGRRRQCHNVR 72
C A R T +T+W AC+ CC + HN R
Sbjct: 144 CSAPCREGTTATSWYEAEVPACNCCCTSSPRTHNPR 251
>gb|AL500237.1|AL500237 AL500237 Hordeum vulgare Barke etiolated leaves Hordeum vulgare
subsp. vulgare cDNA clone HK05K01r 3', mRNA sequence
Length = 585
Score = 29.9 bits (59), Expect = 5.1
Identities = 11/27 (40%), Positives = 14/27 (51%)
Frame = -2 / -2
Query: 140 WQTPSCSACSYCCGRRRQCHNVR*SRQ 60
WQ S + + CCG QCH R R+
Sbjct: 404 WQEGSGTCEARCCGEEAQCHGSRCRRK 324
Database: Hordeum_nucl_with_EST.fasta
Posted date: May 2, 2006 2:38 PM
Number of letters in database: 175,134,539
Number of sequences in database: 312,970
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 126,175,213
Number of Sequences: 312970
Number of extensions: 1765622
Number of successful extensions: 153826
Number of sequences better than 10.0: 475
length of database: 58,378,179
effective HSP length: 49
effective length of database: 43,042,649
effective search space used: 2625601589
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)