TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2161254.2.1
(1192 letters)
Database: Hordeum_nucl_with_EST.fasta
312,970 sequences; 175,134,539 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CA029433.1|CA029433 HZ65D06r HZ Hordeum vulgare subsp. v... 418 e-116
gb|BF264487.2|BF264487 HV_CEa0009I22f Hordeum vulgare seedl... 380 e-104
gb|AV932103.1|AV932103 AV932103 K. Sato unpublished cDNA li... 370 e-102
gb|AW982740.2|AW982740 HVSMEg0004B07f Hordeum vulgare pre-a... 338 e-100
gb|CA009590.1|CA009590 HU14I23r HU Hordeum vulgare subsp. v... 358 5e-098
gb|CA024621.1|CA024621 HZ49N06r HZ Hordeum vulgare subsp. v... 347 1e-094
gb|CA029603.1|CA029603 HZ65L02r HZ Hordeum vulgare subsp. v... 347 1e-094
gb|BU983820.1|BU983820 HA31C09r HA Hordeum vulgare subsp. v... 288 4e-077
gb|BQ460354.1|BQ460354 HA09O20r HA Hordeum vulgare subsp. v... 282 3e-075
gb|BU967351.1|BU967351 HB04A14r BC Hordeum vulgare subsp. v... 234 6e-061
gb|BM374077.2|BM374077 EBma03_SQ003_J08_R maternal, 8 DPA, ... 218 4e-059
gb|CA029014.1|CA029014 HZ63P04r HZ Hordeum vulgare subsp. v... 214 2e-057
gb|BU979580.1|BU979580 HA16J20r HA Hordeum vulgare subsp. v... 220 2e-056
gb|BI949335.1|BI949335 HVSMEl0013G12f Hordeum vulgare spike... 217 1e-055
gb|BF627539.2|BF627539 HVSMEb0005C01f Hordeum vulgare seedl... 206 2e-052
gb|CA024152.1|CA024152 HZ48I02r HZ Hordeum vulgare subsp. v... 198 5e-050
gb|CA028957.1|CA028957 HZ63L22r HZ Hordeum vulgare subsp. v... 197 9e-050
gb|AV836294.1|AV836294 AV836294 K. Sato unpublished cDNA li... 195 3e-049
gb|CA024885.1|CA024885 HZ50J14r HZ Hordeum vulgare subsp. v... 172 3e-042
gb|CA026435.1|CA026435 HZ55O15r HZ Hordeum vulgare subsp. v... 172 3e-042
gb|BI952689.1|BI952689 HVSMEm0007G12f Hordeum vulgare green... 168 4e-041
gb|CA020538.1|CA020538 HZ36J20r HZ Hordeum vulgare subsp. v... 168 4e-041
gb|CA024147.1|CA024147 HZ48H21r HZ Hordeum vulgare subsp. v... 165 4e-040
gb|BM100077.2|BM100077 EBma01_SQ001_B24_R maternal, 4 DPA, ... 165 6e-040
gb|BU975293.1|BU975293 HB30L10r BC Hordeum vulgare subsp. v... 153 2e-036
gb|BU990075.1|BU990075 HF23P24r HF Hordeum vulgare subsp. v... 152 3e-036
gb|CB883684.1|CB883684 HQ02P16w HQ Hordeum vulgare subsp. v... 132 5e-030
gb|AL508926.1|AL508926 AL508926 Hordeum vulgare Barke devel... 121 7e-027
gb|AV923522.1|AV923522 AV923522 K. Sato unpublished cDNA li... 118 5e-026
gb|CA014049.1|CA014049 HT10D23r HT Hordeum vulgare subsp. v... 104 9e-022
>gb|CA029433.1|CA029433 HZ65D06r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ65D06
5-PRIME, mRNA sequence
Length = 642
Score = 418 bits (906), Expect = e-116
Identities = 160/213 (75%), Positives = 192/213 (90%)
Frame = +1 / +3
Query: 493 ELVSNRGFEAGGSHTPSNIDPWSIIGDDSSVFVATDRTSCFSRNIVALRMEVLCDECPAG 672
ELVSN+GFEAGG HTPSNIDPWSIIGD+SS++V T+RTSCFSRNIVALRME+LC +CPAG
Sbjct: 3 ELVSNKGFEAGGPHTPSNIDPWSIIGDESSIYVKTERTSCFSRNIVALRMEILCAKCPAG 182
Query: 673 GVGVYNPGFWGMNIEDGKAYNLVMYVQSPETKDLTVSLTSSDGLQNLASATITVSGTSNW 852
GVG+YNPGFWGMNIE+GK+YNLVMY++S E+ +L SLT SDGLQN+A+A I + S+W
Sbjct: 183 GVGIYNPGFWGMNIEEGKSYNLVMYIRSLESVELAASLTCSDGLQNIATAVIVDTDVSDW 362
Query: 853 TKVEQKLVAKGTNRTSRLQITTNKKGVVWLDQVSLMPEDTYKGHGFRTELISMLLDLKPR 1032
K+E +L+AKGT RTSRL++TT+K+GV+W+DQVSL+P DTYKGHGFR ELI ML+DL+PR
Sbjct: 363 RKIEMQLLAKGTCRTSRLELTTSKRGVIWIDQVSLIPSDTYKGHGFRKELIHMLMDLRPR 542
Query: 1033 FLRFPGGCFVEGDWLRNAFRWRESIGPWEERPG 1131
FLRFPGG FVEG+ LRNAFRWRE+IGPWEERPG
Sbjct: 543 FLRFPGGTFVEGNLLRNAFRWRETIGPWEERPG 641
Score = 312 bits (676), Expect = 2e-084
Identities = 145/213 (68%), Positives = 162/213 (76%)
Frame = -3 / -3
Query: 1130 PGLSSHGPIDSLHLNAFLSQSPSTKQPPGNLKNRGFKSKSMDISSVRKPCPLYVSSGMSD 951
PGLSSHGPI SLHL AFL++ PSTK PPGN +NRG KS SM +SS+RKP PLYVS GMSD
Sbjct: 640 PGLSSHGPIVSLHLKAFLNKFPSTKVPPGNRRNRGLKSISMCMSSLRKPWPLYVSEGMSD 461
Query: 950 T*SSQTTPFLFVVI*SLDVLLVPLATSFCSTFVQFDVPETVIVAEAKFCNPSELVNETVR 771
T*S TP L VV SL+VL VPLA + S F+Q D + + A A FC+PSE V+E
Sbjct: 460 T*SIHMTPLLEVVNSSLEVLHVPLANNCISIFLQSDTSVSTMTAVAIFCSPSEHVSEAAN 281
Query: 770 SFVSGD*TYITRL*AFPSSMFMPQKPGL*TPTPPAGHSSQRTSILRATMFRLKHDVRSVA 591
S S D YITRL* FPSSMFMPQ PGL* PTPPAGH +QR SILRAT+F LK DV SV
Sbjct: 280 STDSSDLIYITRL*LFPSSMFMPQNPGL*IPTPPAGHLAQRISILRATIFLLKQDVLSVF 101
Query: 590 TNTEESSPMMDHGSMFDGV*EPPASKPLLLTSS 492
T E+SSPM+DHGSMF+GV* PPASKPLLLTSS
Sbjct: 100 TYMEDSSPMIDHGSMFEGV*GPPASKPLLLTSS 2
Score = 234 bits (505), Expect = 8e-061
Identities = 111/213 (52%), Positives = 145/213 (68%)
Frame = -2 / -2
Query: 1131 SRPLFPWTN*FSPSECIS*PVTFYKTTSRKSQESWFQIQKHGYKFCAETMSLVCVFRHE* 952
+RPLFPWT+ F PSE IS* + F K T+RKS+E W + KH Y+F A+ M+LVC+ R+E*
Sbjct: 641 TRPLFPWTDSFPPSESIS*QIPFNKGTTRKSKEPWS*VHKHVYEFLAKAMALVCI*RYE* 462
Query: 951 YLIKPNNSFFVRCYLKP*CSIGSFSNQLLLHFCPI*CARNCYCS*SQVLQPIRAC**NC* 772
+LI P +S F C LK * S SFS L L+ PI* Y S +LQ I C *+ *
Sbjct: 461 HLIDPYDSPFGSC*LKS*SSARSFS**LHLYLSPI*HICIYYDSCCYILQSI*TCE*SS* 282
Query: 771 ILCFWGLNIHNEIVGLPIFYVHAPKTWVINTNTTSWTLITEDLHPQSNNVSTET*CTISR 592
+ F +IH +I+ LP FYVHAP++WV+NTNT SWTL T++ HP SN++STET C+ S
Sbjct: 281 LHGF**SDIHYQIIALPFFYVHAPESWVVNTNTASWTLGTKNFHP*SNDISTETRCSFSL 102
Query: 591 HKHGGVISNDGPRVDV*WSMRASSFETSVTDKL 493
H +GG ++ND P + V* S+R S F+T VTDKL
Sbjct: 101 HVYGGFVTNDRPWIYV*RSVRPSGFKTFVTDKL 3
Score = 208 bits (449), Expect = 4e-053
Identities = 101/212 (47%), Positives = 126/212 (59%)
Frame = +3 / +2
Query: 495 ACQ*QRFRSWRLSYSIKHRPVVHHWR*LLRVCGD*SYIMFQSKHCCSEDGGPL**VSSWW 674
ACQ*QRF S R S+S KHR +V+HW +L + D* I+FQ K+ CS+DG L VSSW
Sbjct: 5 ACQ*QRF*SRRASHSFKHRSMVYHW*RILHIRED*KNILFQ*KYRCSKDGNSLCQVSSWR 184
Query: 675 CWCL*PRFLGHEHRRWEGLQSRYVCSVPRNKGSNSFINKL*WVAKLGFSYNNSFWHIKLD 854
CW L PR LGHEHRR E L S V + R +G + F + W AK S ++ + ++L+
Sbjct: 185 CWYLQPRILGHEHRRREEL*SGNVYQITRIRGVSCFTHMFRWTAKYSNSCHSRYRCVRLE 364
Query: 855 KSGAEAGC*RNQ*NIKASNNNEQKRSCLA*SSITHA*RHIQGTWFPHRTYIHAFGFETTI 1034
K *RN N K NN QK S + SS+TH R+IQG W T+ HA+G +TT+
Sbjct: 365 KDRDAIIS*RNVQNFKT*VNNFQKGSHMDRSSVTHTFRYIQGPWLSQGTHTHAYGLKTTV 544
Query: 1035 LEISWRLFCRR*LAKKCIQMERINWSMGREAW 1130
ISW C R KKC QME SMGREAW
Sbjct: 545 PSISWWYLC*REFVKKCFQMEGNYRSMGREAW 640
Score = 174 bits (374), Expect = 1e-042
Identities = 102/212 (48%), Positives = 126/212 (59%)
Frame = -1 / -1
Query: 1129 QASLPMDQLILSI*MHFLASHLLQNNLQEISRIVVSNPKAWI*VLCGNHVPCMCLQA*VI 950
QASLPMD+ SI* HFL + L Q QEI VV +P A +*V C +H PCM L+ *V
Sbjct: 639 QASLPMDR*FPSI*KHFLTNSLQQRYHQEIEGTVVLSP*ACV*VPCESHGPCMYLKV*VT 460
Query: 949 LDQAKQLLFCSLLFEALMFYWFL*QPASAPLLSNLMCQKLLL*LKPSFATHQSLLMKLLD 770
LD++ L F LL + L F FL* ++ SNL LL L FA H ++ +K L
Sbjct: 459 LDRSI*LPFWKLLTQVLKFCTFL*LIIASLSFSNLTHLYLL*QLLLYFAVHLNM*VKQLT 280
Query: 769 PLFLGTEHT*RDCRPSHLLCSCPKNLGYKHQHHQLDTHHRGPPSSEQQCFD*NMMYDQSP 590
P L +T D S LLCSCP+ LG K+QH QLDT H+ PS EQ+ F *N M+ QS
Sbjct: 279 PRILVI*YTLPDYSSSLLLCSCPRILGCKYQHRQLDTWHKEFPSLEQRYFY*NKMFFQSS 100
Query: 589 QTRRSHLQ*WTTGRCLMEYESLQLRNLCY*QA 494
+ R Q* T CL E E+L+L+NLCY*QA
Sbjct: 99 RIWRIRHQ**TMDLCLKECEALRLQNLCY*QA 4
Score = 157 bits (337), Expect = 1e-037
Identities = 99/213 (46%), Positives = 111/213 (52%)
Frame = +2 / +1
Query: 491 QSLSVTEVSKLEALILHQTSTRGPSLEMTPPCLWRLIVHHVSVETLLL*GWRXXXXXXXX 670
+SLSVT+V K E L L QT G SL PP RL H VSVE LL*GW+
Sbjct: 1 RSLSVTKVLKPEGLTLLQT*IHGLSLVTNPPYT*RLKEHLVSVEISLL*GWKFFVPSVQL 180
Query: 671 XXXXFITQVFGA*T*KMGRPTISLCMFSPQKQRI*QFH*QALMGCKTWLQLQ*QFLAHQI 850
F TQ GA*T*K GR I C+ * H M CK QL * QI
Sbjct: 181 AVLVFTTQDSGA*T*KKGRAIIW*CISDH*NPWS*LLHSHVQMDCKI*QQLS**IQMCQI 360
Query: 851 GQKWSRSWLLKEPIEHQGFK*QRTKKELFGLIKYHSCLKTHTRDMVSAQNLYPCFWI*NH 1030
G++ ++ LKE E Q *Q K E +G IK HS L+ HTR M A+N Y C W *+H
Sbjct: 361 GER*RCNY*LKERAELQDLS*QLPKGESYGSIKCHSYLQIHTRAMAFARNSYTCLWT*DH 540
Query: 1031 DS*DFLEVVL*KVTG*EMHSDGENQLVHGKRGL 1129
S DFL V L K *EM SDG VHGKRGL
Sbjct: 541 GSFDFLVVPLLKGIC*EMLSDGGKLSVHGKRGL 639
>gb|BF264487.2|BF264487 HV_CEa0009I22f Hordeum vulgare seedling green leaf EST library
HVcDNA0004 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEa0009I22f, mRNA sequence
Length = 865
Score = 380 bits (823), Expect = e-104
Identities = 155/196 (79%), Positives = 170/196 (86%)
Frame = +1 / +1
Query: 259 AYRKWKPMDLKQASSGTIFCLLLLFCVGCRCRPSEIEATQTAALKVDASPQLARKIPETL 438
A K K M KQ TI C+LLLFC GC+C E++ATQTA LKVDAS QLARKIP+TL
Sbjct: 70 ALYKMKRMGSKQVFVPTIACVLLLFCFGCKCIAWELQATQTATLKVDASSQLARKIPDTL 249
Query: 439 FGIFFEEINHAGAGGIWAELVSNRGFEAGGSHTPSNIDPWSIIGDDSSVFVATDRTSCFS 618
FG+FFEEINHAGAGGIWAELVSNRGFEAGG HTPSNIDPWSIIGDDSS+FVATDRTSCFS
Sbjct: 250 FGMFFEEINHAGAGGIWAELVSNRGFEAGGLHTPSNIDPWSIIGDDSSIFVATDRTSCFS 429
Query: 619 RNIVALRMEVLCDECPAGGVGVYNPGFWGMNIEDGKAYNLVMYVQSPETKDLTVSLTSSD 798
RNI+ALRMEVLCD+CPA GVG+YNPGFWGMNIEDGK YNLVMYV+S E +LTVSL SSD
Sbjct: 430 RNIIALRMEVLCDDCPASGVGIYNPGFWGMNIEDGKTYNLVMYVKSAEAAELTVSLASSD 609
Query: 799 GLQNLASATITVSGTS 846
G+QNLAS T+ V+GTS
Sbjct: 610 GVQNLASVTVPVAGTS 657
Score = 325 bits (704), Expect(2) = 1e-088
Identities = 145/193 (75%), Positives = 151/193 (78%)
Frame = -3 / -3
Query: 845 DVPETVIVAEAKFCNPSELVNETVRSFVSGD*TYITRL*AFPSSMFMPQKPGL*TPTPPA 666
+VP T V EA+FC PSEL NETV S S D TYITRL* FPSSMFMPQ PGL* PTP A
Sbjct: 656 EVPATGTVTEARFCTPSELANETVNSAASADLTYITRL*VFPSSMFMPQNPGL*MPTPLA 477
Query: 665 GHSSQRTSILRATMFRLKHDVRSVATNTEESSPMMDHGSMFDGV*EPPASKPLLLTSSAH 486
G SSQRTSILRA MFRLKHDVRSVATN EESSP++DHGS+FDGV PPASKPLLLTSSAH
Sbjct: 476 GQSSQRTSILRAIMFRLKHDVRSVATNMEESSPIIDHGSIFDGVWSPPASKPLLLTSSAH 297
Query: 485 MPPAPAWLISSKNIPNSVSGIFRASCGEASTLRAAVWVASISEGRHLQPTQNRSRRQKIV 306
MPPAPAWLISSKNIPNSVSGIFRASC EASTLR AV VA S HL P QNRS +V
Sbjct: 296 MPPAPAWLISSKNIPNSVSGIFRASCDEASTLRVAVCVACNSHAMHLHPKQNRSSTHAMV 117
Query: 305 PEEACLRSIGFHL 267
CL I F L
Sbjct: 116 GTNTCLEPIRFIL 78
Score = 262 bits (566), Expect = 3e-069
Identities = 113/197 (57%), Positives = 135/197 (68%)
Frame = +3 / +3
Query: 267 QVEAYGSQASLLWYNLLPSASILRGLQMSAFGNRGHPDSSPQG*CLATACPEDP*NTVWD 446
Q EAYG Q S+ Y+ + +A IL +QM + G D PQG*CL TACP+D +TVWD
Sbjct: 78 QDEAYGFQTSVRSYHRMRAAPILLWMQMHSMGITSDTDGHPQG*CLITACPKDTRHTVWD 257
Query: 447 IF*GDQPCRSWWHMGRACQ*QRFRSWRLSYSIKHRPVVHHWR*LLRVCGD*SYIMFQSKH 626
+F*GDQPCRS WHMGR C * RF SWR Y+IK+ P+V++WR L +CGD*SYIMFQSKH
Sbjct: 258 VF*GDQPCRSRWHMGRTC***RF*SWRTPYAIKY*PMVYNWRRLFHICGD*SYIMFQSKH 437
Query: 627 CCSEDGGPL**VSSWWCWCL*PRFLGHEHRRWEGLQSRYVCSVPRNKGSNSFINKL*WVA 806
S DGG L**+ S WCW L P LGHEHRRW+ LQS YVC + R+ +SFI+KL W A
Sbjct: 438 YRS*DGGSL**LPSQWCWHLQPWVLGHEHRRWKDLQSSYVC*ISRSCRIDSFISKLRWGA 617
Query: 807 KLGFSYNNSFWHIKLDK 857
+ F Y S WH K
Sbjct: 618 ESCFCYCTSCWHFNWTK 668
Score = 242 bits (522), Expect = 4e-063
Identities = 113/191 (59%), Positives = 134/191 (70%)
Frame = -2 / -2
Query: 840 ARNCYCS*SQVLQPIRAC**NC*ILCFWGLNIHNEIVGLPIFYVHAPKTWVINTNTTSWT 661
A N Y + S++L PI AC**NC F NIHN IVGL IFYVHAP+ V+N NTT W
Sbjct: 651 ASNWYSNRSKILHPIGAC**NCQFCSFC*FNIHN*IVGLSIFYVHAPEPRVVNANTTGWA 472
Query: 660 LITEDLHPQSNNVSTET*CTISRHKHGGVISNDGPRVDV*WSMRASSFETSVTDKLCPYA 481
+ITE+LHP+S+NVSTET*CTISRHK+G V++N P V++*W M +SSF+TS+T+K CPYA
Sbjct: 471 VITENLHPKSDNVSTET*CTISRHKYGRVVANYRPWVNI*WRMESSSFKTSITNKFCPYA 292
Query: 480 TSSCMVDLLKKYPKQCFRDLPGKLWRGINLEGCCLGGLYFRRPTSAAHAE*KQKAEDCTR 301
T SCMVDLLKK+PKQC L GKL GINLEG L L F A+ AE*+Q A D
Sbjct: 291 TGSCMVDLLKKHPKQCVWYLSGKL**GINLEGGRLCRL*FPCYAFASKAE*EQHACDGRN 112
Query: 300 GGLLEIHRLPL 268
L H L L
Sbjct: 111 EHLFGTHTLHL 79
Score = 223 bits (482), Expect = 1e-057
Identities = 112/194 (57%), Positives = 126/194 (64%)
Frame = -1 / -1
Query: 847 LMCQKLLL*LKPSFATHQSLLMKLLDPLFLGTEHT*RDCRPSHLLCSCPKNLGYKHQHHQ 668
L CQ+L+ * K A H+SLLMKL L HT* DCR HLLCSCP+ G K QHH
Sbjct: 658 LKCQQLVQ*QKQDSAPHRSLLMKLSILQLLLI*HT*LDCRSFHLLCSCPRTQGCKCQHHW 479
Query: 667 LDTHHRGPPSSEQQCFD*NMMYDQSPQTRRSHLQ*WTTGRCLMEYESLQLRNLCY*QALP 488
L +HHR PPS E+ CFD*NMMYDQSPQ +S Q T G+ LM Y LQL+NL Y*Q LP
Sbjct: 478 LGSHHREPPS*ER*CFD*NMMYDQSPQIWKSRRQL*TMGQYLMAYGVLQLQNLYY*QVLP 299
Query: 487 ICHQLLHG*SPQKISQTVFQGSSGQAVARHQP*GLLSGWPLFPKADICSPRRIEAEGRRL 308
ICH+LLHG*SPQK SQTV S GQAV RHQP*G S + P IC RI A R
Sbjct: 298 ICHRLLHG*SPQKTSQTVCLVSFGQAVMRHQP*GWPSVSLVIPMLCICIQSRIGAARMRW 119
Query: 307 YQRRLA*DP*ASTC 266
+R L +P AS+C
Sbjct: 118 *ERTLVWNPYASSC 77
Score = 176 bits (378), Expect(2) = 1e-044
Identities = 90/148 (60%), Positives = 95/148 (64%)
Frame = +2 / +2
Query: 407 HSLPGRSLKHCLGYFLRRSTMQELVAYGQSLSVTEVSKLEALILHQTSTRGPSLEMTPPC 586
HSLP R HCLG FLRRSTMQE VAYGQ+L V EV KLE I HQ T G L T P
Sbjct: 218 HSLPERYQTHCLGCFLRRSTMQEPVAYGQNLLVIEVLKLEDSIRHQILTHGL*LATTLPY 397
Query: 587 LWRLIVHHVSVETLLL*GWRXXXXXXXXXXXXFITQVFGA*T*KMGRPTISLCMFSPQKQ 766
LWRLIVHHVSVETL L GWR F T GA*T*KM RPTI LCM + QK
Sbjct: 398 LWRLIVHHVSVETLSLLGWRFSVMTAQPVVLAFTTLGSGA*T*KMERPTI*LCMLNQQKL 577
Query: 767 RI*QFH*QALMGCKTWLQLQ*QFLAHQI 850
+ *QFH*QA MGC+ L L Q LA Q+
Sbjct: 578 QN*QFH*QAPMGCRILLLLLYQLLALQL 661
Score = 24.9 bits (48), Expect(2) = 1e-044
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = +2 / +2
Query: 275 SLWISSKPPLVQSSAFCFYSAWAAD 349
S+W+ +K + S A C YSA A+
Sbjct: 86 SVWVPNKCSFLPSHACCSYSALDAN 160
Score = 22.6 bits (43), Expect(2) = 1e-088
Identities = 7/13 (53%), Positives = 10/13 (76%)
Frame = -1 / -1
Query: 259 RRR*CNECVMHPT 221
+ *C+ CVM+PT
Sbjct: 76 KEH*CSPCVMNPT 38
>gb|AV932103.1|AV932103 AV932103 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal2e14 5', mRNA sequence
Length = 644
Score = 370 bits (802), Expect = e-102
Identities = 151/186 (81%), Positives = 163/186 (87%)
Frame = +1 / +1
Query: 259 AYRKWKPMDLKQASSGTIFCLLLLFCVGCRCRPSEIEATQTAALKVDASPQLARKIPETL 438
A K K M KQ TI C+LLLFC GC+C SE++ATQTA LKVDAS QLARKIP+TL
Sbjct: 85 ALYKMKRMGSKQVFVPTIACVLLLFCFGCKCIASELQATQTATLKVDASSQLARKIPDTL 264
Query: 439 FGIFFEEINHAGAGGIWAELVSNRGFEAGGSHTPSNIDPWSIIGDDSSVFVATDRTSCFS 618
FG+FFEEINHAGAGGIWAELVSNRGFEAGG HTPSNIDPWSIIGDDSS+FVATDRTSCFS
Sbjct: 265 FGMFFEEINHAGAGGIWAELVSNRGFEAGGLHTPSNIDPWSIIGDDSSIFVATDRTSCFS 444
Query: 619 RNIVALRMEVLCDECPAGGVGVYNPGFWGMNIEDGKAYNLVMYVQSPETKDLTVSLTSSD 798
RNI+ALRMEVLCD+CPA GVG+YNPGFWGMNIEDGK YNLVMYV+S E +LTVSL SSD
Sbjct: 445 RNIIALRMEVLCDDCPASGVGIYNPGFWGMNIEDGKTYNLVMYVKSAEAAELTVSLASSD 624
Query: 799 GLQNLA 816
GLQNLA
Sbjct: 625 GLQNLA 642
Score = 321 bits (695), Expect(2) = 2e-087
Identities = 142/184 (77%), Positives = 148/184 (80%)
Frame = -3 / -1
Query: 818 EAKFCNPSELVNETVRSFVSGD*TYITRL*AFPSSMFMPQKPGL*TPTPPAGHSSQRTSI 639
EA+FCNPSEL NETV S S D TYITRL* FPSSMFMPQ PGL* PTP AG SSQRTSI
Sbjct: 644 EARFCNPSELANETVNSAASADLTYITRL*VFPSSMFMPQNPGL*MPTPLAGQSSQRTSI 465
Query: 638 LRATMFRLKHDVRSVATNTEESSPMMDHGSMFDGV*EPPASKPLLLTSSAHMPPAPAWLI 459
LRA MFRLKHDVRSVATN EESSP++DHGS+FDGV PPASKPLLLTSSAHMPPAPAWLI
Sbjct: 464 LRAIMFRLKHDVRSVATNMEESSPIIDHGSIFDGVWSPPASKPLLLTSSAHMPPAPAWLI 285
Query: 458 SSKNIPNSVSGIFRASCGEASTLRAAVWVASISEGRHLQPTQNRSRRQKIVPEEACLRSI 279
SSKNIPNSVSGIFRASC EASTLR AV VA S+ HL P QNRS +V CL I
Sbjct: 284 SSKNIPNSVSGIFRASCDEASTLRVAVCVACNSDAMHLHPKQNRSSTHAMVGTNTCLEPI 105
Query: 278 GFHL 267
F L
Sbjct: 104 RFIL 93
Score = 253 bits (547), Expect = 1e-066
Identities = 109/184 (59%), Positives = 131/184 (71%)
Frame = +3 / +3
Query: 267 QVEAYGSQASLLWYNLLPSASILRGLQMSAFGNRGHPDSSPQG*CLATACPEDP*NTVWD 446
Q EAYG Q S+ Y+ + +A IL +QM + G D PQG*CL TACP+D +TVWD
Sbjct: 93 QDEAYGFQTSVRSYHRMRAAPILLWMQMHSIGITSDTDGHPQG*CLITACPKDTRHTVWD 272
Query: 447 IF*GDQPCRSWWHMGRACQ*QRFRSWRLSYSIKHRPVVHHWR*LLRVCGD*SYIMFQSKH 626
+F*GDQPCRS WHMGR C * RF SWR Y+IK+ P+V++WR L +CGD*SYIMFQSKH
Sbjct: 273 VF*GDQPCRSRWHMGRTC***RF*SWRTPYAIKY*PMVYNWRRLFHICGD*SYIMFQSKH 452
Query: 627 CCSEDGGPL**VSSWWCWCL*PRFLGHEHRRWEGLQSRYVCSVPRNKGSNSFINKL*WVA 806
S DGG L**+ S WCW L P LGHEHRRW+ LQS YVC + R+ +SFI+KL WVA
Sbjct: 453 YRS*DGGSL**LPSQWCWHLQPWVLGHEHRRWKDLQSSYVC*ISRSCRIDSFISKLRWVA 632
Query: 807 KLGF 818
+ F
Sbjct: 633 ESCF 644
Score = 243 bits (524), Expect = 2e-063
Identities = 112/183 (61%), Positives = 132/183 (72%)
Frame = -2 / -3
Query: 816 SQVLQPIRAC**NC*ILCFWGLNIHNEIVGLPIFYVHAPKTWVINTNTTSWTLITEDLHP 637
S++LQPI AC**NC F NIHN IVGL IFYVHAP+ V+N NTT W +ITE+LHP
Sbjct: 642 SKILQPIGAC**NCQFCSFC*FNIHN*IVGLSIFYVHAPEPRVVNANTTGWAVITENLHP 463
Query: 636 QSNNVSTET*CTISRHKHGGVISNDGPRVDV*WSMRASSFETSVTDKLCPYATSSCMVDL 457
+S+NVSTET*CTISRHK+G V++N P V++*W M +SSF+TS+T+K CPYAT SCMVDL
Sbjct: 462 KSDNVSTET*CTISRHKYGRVVANYRPWVNI*WRMESSSFKTSITNKFCPYATGSCMVDL 283
Query: 456 LKKYPKQCFRDLPGKLWRGINLEGCCLGGLYFRRPTSAAHAE*KQKAEDCTRGGLLEIHR 277
LKK+PKQC L GKL GINLEG L L FR A+ AE*+Q A D L H
Sbjct: 282 LKKHPKQCVWYLSGKL**GINLEGGRLCRL*FRCYAFASKAE*EQHACDGRNEHLFGTHT 103
Query: 276 LPL 268
L L
Sbjct: 102 LHL 94
Score = 217 bits (468), Expect = 1e-055
Identities = 108/184 (58%), Positives = 120/184 (65%)
Frame = -1 / -2
Query: 817 KPSFATHQSLLMKLLDPLFLGTEHT*RDCRPSHLLCSCPKNLGYKHQHHQLDTHHRGPPS 638
K ATH+SLLMKL L HT* DCR HLLCSCP+ G K QHH L +HHR PPS
Sbjct: 643 KQDSATHRSLLMKLSILQLLLI*HT*LDCRSFHLLCSCPRTQGCKCQHHWLGSHHREPPS 464
Query: 637 SEQQCFD*NMMYDQSPQTRRSHLQ*WTTGRCLMEYESLQLRNLCY*QALPICHQLLHG*S 458
E+ CFD*NMMYDQSPQ +S Q T G+ LM Y LQL+NL Y*Q LPICH+LLHG*S
Sbjct: 463 *ER*CFD*NMMYDQSPQIWKSRRQL*TMGQYLMAYGVLQLQNLYY*QVLPICHRLLHG*S 284
Query: 457 PQKISQTVFQGSSGQAVARHQP*GLLSGWPLFPKADICSPRRIEAEGRRLYQRRLA*DP* 278
PQK SQTV S GQAV RHQP*G S + P IC RI A R +R L +P
Sbjct: 283 PQKTSQTVCLVSFGQAVMRHQP*GWPSVSLVIPMLCICIQSRIGAARMRW*ERTLVWNPY 104
Query: 277 ASTC 266
AS+C
Sbjct: 103 ASSC 92
Score = 170 bits (365), Expect(2) = 6e-043
Identities = 85/137 (62%), Positives = 89/137 (64%)
Frame = +2 / +2
Query: 407 HSLPGRSLKHCLGYFLRRSTMQELVAYGQSLSVTEVSKLEALILHQTSTRGPSLEMTPPC 586
HSLP R HCLG FLRRSTMQE VAYGQ+L V EV KLE I HQ T G L T P
Sbjct: 233 HSLPERYQTHCLGCFLRRSTMQEPVAYGQNLLVIEVLKLEDSIRHQILTHGL*LATTLPY 412
Query: 587 LWRLIVHHVSVETLLL*GWRXXXXXXXXXXXXFITQVFGA*T*KMGRPTISLCMFSPQKQ 766
LWRLIVHHVSVETL L GWR F T GA*T*KM RPTI LCM + QK
Sbjct: 413 LWRLIVHHVSVETLSLLGWRFSVMTAQPVVLAFTTLGSGA*T*KMERPTI*LCMLNQQKL 592
Query: 767 RI*QFH*QALMGCKTWL 817
+ *QFH*QA MGC+ L
Sbjct: 593 QN*QFH*QAPMGCRILL 643
Score = 24.9 bits (48), Expect(2) = 6e-043
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = +2 / +2
Query: 275 SLWISSKPPLVQSSAFCFYSAWAAD 349
S+W+ +K + S A C YSA A+
Sbjct: 101 SVWVPNKCSFLPSHACCSYSALDAN 175
Score = 22.6 bits (43), Expect(2) = 2e-087
Identities = 7/13 (53%), Positives = 10/13 (76%)
Frame = -1 / -2
Query: 259 RRR*CNECVMHPT 221
+ *C+ CVM+PT
Sbjct: 91 KEH*CSPCVMNPT 53
>gb|AW982740.2|AW982740 HVSMEg0004B07f Hordeum vulgare pre-anthesis spike EST library
HVcDNA0008 (white to yellow anther) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEg0004B07f, mRNA sequence
Length = 605
Score = 338 bits (732), Expect(3) = e-100
Identities = 133/160 (83%), Positives = 147/160 (91%)
Frame = +1 / +2
Query: 622 NIVALRMEVLCDECPAGGVGVYNPGFWGMNIEDGKAYNLVMYVQSPETKDLTVSLTSSDG 801
+I+AL+MEVLCD+CPA GVG+YNPGFWGMNIEDGK YNLVMYV+S E +LTVSL SSDG
Sbjct: 53 DIIALKMEVLCDDCPASGVGIYNPGFWGMNIEDGKTYNLVMYVKSAEAAELTVSLASSDG 232
Query: 802 LQNLASATITVSGTSNWTKVEQKLVAKGTNRTSRLQITTNKKGVVWLDQVSLMPEDTYKG 981
LQNLAS T+ V+GTSNWTKVEQKL+AKGTNRTSRLQIT+NKKGVVW DQVSLMP DT+KG
Sbjct: 233 LQNLASVTVPVAGTSNWTKVEQKLIAKGTNRTSRLQITSNKKGVVWFDQVSLMPSDTFKG 412
Query: 982 HGFRTELISMLLDLKPRFLRFPGGCFVEGDWLRNAFRWRE 1101
HGFRTELISMLLDLKPRFLRFPGGCFVE W++NAFR RE
Sbjct: 413 HGFRTELISMLLDLKPRFLRFPGGCFVESQWVKNAFRGRE 532
Score = 269 bits (582), Expect(2) = 4e-076
Identities = 121/160 (75%), Positives = 129/160 (80%)
Frame = -3 / -3
Query: 1103 DSLHLNAFLSQSPSTKQPPGNLKNRGFKSKSMDISSVRKPCPLYVSSGMSDT*SSQTTPF 924
+SL L AF + STK PPGNLKNRGF+SKSMDISSVRKPCPL VS GMSDT*S+ TTPF
Sbjct: 534 NSLPLKAFFTHWLSTKHPPGNLKNRGFRSKSMDISSVRKPCPLNVSEGMSDT*SNHTTPF 355
Query: 923 LFVVI*SLDVLLVPLATSFCSTFVQFDVPETVIVAEAKFCNPSELVNETVRSFVSGD*TY 744
L VI*SL+VL VPLA +FCSTFVQ +VP T V EA+FCNPSEL NETV S S D TY
Sbjct: 354 LLDVI*SLEVLFVPLAINFCSTFVQLEVPATGTVTEARFCNPSELANETVNSAASADLTY 175
Query: 743 ITRL*AFPSSMFMPQKPGL*TPTPPAGHSSQRTSILRATM 624
ITRL* FPSSMFMPQ PGL* PTP AG SSQRTSILRA M
Sbjct: 174 ITRL*VFPSSMFMPQNPGL*MPTPLAGQSSQRTSILRAIM 55
Score = 224 bits (483), Expect(2) = 2e-062
Identities = 101/161 (62%), Positives = 117/161 (72%)
Frame = -2 / -2
Query: 1104 *FSPSECIS*PVTFYKTTSRKSQESWFQIQKHGYKFCAETMSLVCVFRHE*YLIKPNNSF 925
*F P E I P+ F + +RKSQESWF IQKHGY+F A+TMSL V RHE*YLIKP NS
Sbjct: 535 *FPPPEGIFYPLAFNEAPTRKSQESWF*IQKHGYQFGAKTMSLERV*RHE*YLIKPYNSL 356
Query: 924 FVRCYLKP*CSIGSFSNQLLLHFCPI*CARNCYCS*SQVLQPIRAC**NC*ILCFWGLNI 745
VRCYLK * S+ FSNQ LLHFCP+ A N Y + S++LQPI AC**NC F NI
Sbjct: 355 LVRCYLKS*GSVCPFSNQFLLHFCPVGSASNWYSNRSKILQPIGAC**NCQFCSFC*FNI 176
Query: 744 HNEIVGLPIFYVHAPKTWVINTNTTSWTLITEDLHPQSNNV 622
HN IVGL IFYVHAP+ V+N NTT W +ITE+LH +S+NV
Sbjct: 175 HN*IVGLSIFYVHAPEPRVVNANTTGWAVITENLHLKSDNV 53
Score = 220 bits (475), Expect(3) = 2e-063
Identities = 96/164 (58%), Positives = 117/164 (71%)
Frame = +3 / +1
Query: 612 FQSKHCCSEDGGPL**VSSWWCWCL*PRFLGHEHRRWEGLQSRYVCSVPRNKGSNSFINK 791
F +H S DGG L**+ S WCW L P LGHEHRRW+ LQS YVC + R+ +SFI+K
Sbjct: 43 FSRRHYRS*DGGSL**LPSQWCWHLQPWVLGHEHRRWKDLQSSYVC*ISRSCRIDSFISK 222
Query: 792 L*WVAKLGFSYNNSFWHIKLDKSGAEAGC*RNQ*NIKASNNNEQKRSCLA*SSITHA*RH 971
L WVA+ F Y S WH +LDKSGA+ C*R++ N+K SNN Q+ SC+ *SSITHA RH
Sbjct: 223 LRWVAESCFCYCTSCWHFQLDKSGAKIDC*RDKQNLKTSNNI*QEGSCMV*SSITHAFRH 402
Query: 972 IQGTWFPHRTYIHAFGFETTILEISWRLFCRR*LAKKCIQMERI 1103
+QGTWF HRT IHAFG +TTILEISW + + + KKC+Q E I
Sbjct: 403 VQGTWFSHRTDIHAFGSKTTILEISWWVLR*KPMGKKCLQGEGI 534
Score = 185 bits (398), Expect(2) = 3e-050
Identities = 92/161 (57%), Positives = 104/161 (64%)
Frame = +2 / +3
Query: 620 ETLLL*GWRXXXXXXXXXXXXFITQVFGA*T*KMGRPTISLCMFSPQKQRI*QFH*QALM 799
+TL L WR F T GA*T*KM RPTI LCM + QK + *QFH*QA M
Sbjct: 51 KTLSLLRWRFSVMTAQPVVLAFTTLGSGA*T*KMERPTI*LCMLNQQKLQN*QFH*QAPM 230
Query: 800 GCKTWLQLQ*QFLAHQIGQKWSRSWLLKEPIEHQGFK*QRTKKELFGLIKYHSCLKTHTR 979
GC+ L L Q LA GQKWS++ LLK E Q FK* T++EL+GLIKYHSCL+T +R
Sbjct: 231 GCRILLLLLYQLLALPTGQKWSKN*LLKGQTEPQDFK*HLTRRELYGLIKYHSCLQTRSR 410
Query: 980 DMVSAQNLYPCFWI*NHDS*DFLEVVL*KVTG*EMHSDGEN 1102
DMV A N YPCFWI*NHDS*DFL K G*+M S G N
Sbjct: 411 DMVFAPN*YPCFWI*NHDS*DFLVGASLKANG*KMPSGGGN 533
Score = 183 bits (394), Expect(2) = 3e-049
Identities = 92/161 (57%), Positives = 105/161 (65%)
Frame = -1 / -1
Query: 1105 LILSI*MHFLASHLLQNNLQEISRIVVSNPKAWI*VLCGNHVPCMCLQA*VILDQAKQLL 926
+I S * HFL ++ QEISRIVV +PKAWI V C NHVP CL+A*VILDQ QL
Sbjct: 536 IIPSP*RHFLPIGFQRSTHQEISRIVVLDPKAWISVRCENHVP*TCLKA*VILDQTIQLP 357
Query: 925 FCSLLFEALMFYWFL*QPASAPLLSNLMCQKLLL*LKPSFATHQSLLMKLLDPLFLGTEH 746
C +LFE L F L*Q APLLS+ CQ+L+ * K ATH+SLLMKL L H
Sbjct: 356 SC*MLFEVLRFCLSL*QSIFAPLLSSWKCQQLVQ*QKQDSATHRSLLMKLSILQLLLI*H 177
Query: 745 T*RDCRPSHLLCSCPKNLGYKHQHHQLDTHHRGPPSSEQQC 623
T* DCR HLLCSCP+ G K QHH L +HHR PPS E+ C
Sbjct: 176 T*LDCRSFHLLCSCPRTQGCKCQHHWLGSHHREPPS*ER*C 54
Score = 42.3 bits (86), Expect(3) = e-100
Identities = 16/17 (94%), Positives = 17/17 (100%)
Frame = +1 / +1
Query: 571 DDSSVFVATDRTSCFSR 621
DDSS+FVATDRTSCFSR
Sbjct: 1 DDSSIFVATDRTSCFSR 51
Score = 37.3 bits (75), Expect(3) = 2e-063
Identities = 14/19 (73%), Positives = 16/19 (84%)
Frame = +2 / +2
Query: 575 TPPCLWRLIVHHVSVETLL 631
T P LWRLIVHHVSVE ++
Sbjct: 5 TLPYLWRLIVHHVSVEDII 61
Score = 36.3 bits (73), Expect(2) = 4e-076
Identities = 15/16 (93%), Positives = 15/16 (93%)
Frame = -3 / -1
Query: 620 RLKHDVRSVATNTEES 573
RLKHDVRSVATN EES
Sbjct: 50 RLKHDVRSVATNMEES 3
Score = 36.3 bits (73), Expect(2) = 2e-062
Identities = 14/17 (82%), Positives = 16/17 (94%)
Frame = -2 / -3
Query: 621 STET*CTISRHKHGGVI 571
STET*CTISRHK+G V+
Sbjct: 51 STET*CTISRHKYGRVV 1
Score = 34.5 bits (69), Expect(2) = 3e-050
Identities = 13/16 (81%), Positives = 14/16 (87%)
Frame = +3 / +3
Query: 576 LLRVCGD*SYIMFQSK 623
L +CGD*SYIMFQSK
Sbjct: 6 LFHICGD*SYIMFQSK 53
Score = 32.7 bits (65), Expect(2) = 3e-049
Identities = 13/16 (81%), Positives = 14/16 (87%)
Frame = -1 / -2
Query: 622 FD*NMMYDQSPQTRRS 575
FD*NMMYDQSPQ +S
Sbjct: 52 FD*NMMYDQSPQIWKS 5
Score = 26.7 bits (52), Expect(3) = e-100
Identities = 8/10 (80%), Positives = 9/10 (90%)
Frame = +1 / +3
Query: 1108 GPWEERPGHF 1137
GPW+ERPG F
Sbjct: 537 GPWKERPGTF 566
Score = 24.9 bits (48), Expect(3) = 2e-063
Identities = 7/13 (53%), Positives = 9/13 (69%)
Frame = +3 / +2
Query: 1107 WSMGREAWTLRGC 1145
W++ REAW R C
Sbjct: 536 WALEREAWHFRDC 574
>gb|CA009590.1|CA009590 HU14I23r HU Hordeum vulgare subsp. vulgare cDNA clone HU14I23
5-PRIME, mRNA sequence
Length = 598
Score = 358 bits (775), Expect = 5e-098
Identities = 144/174 (82%), Positives = 155/174 (89%)
Frame = +1 / +3
Query: 307 TIFCLLLLFCVGCRCRPSEIEATQTAALKVDASPQLARKIPETLFGIFFEEINHAGAGGI 486
TI C LLLFCV C+C SE E TQ A+L VD+SP LARKIP+TLFGIFFEEINHAGAGGI
Sbjct: 75 TILCFLLLFCVSCKCLASEFEITQVASLGVDSSPHLARKIPDTLFGIFFEEINHAGAGGI 254
Query: 487 WAELVSNRGFEAGGSHTPSNIDPWSIIGDDSSVFVATDRTSCFSRNIVALRMEVLCDECP 666
WAELVSNRGFEAGG HTPSNI+PWSIIGDDSS+FV TDRTSCFSRN VALRMEVLCD CP
Sbjct: 255 WAELVSNRGFEAGGPHTPSNINPWSIIGDDSSIFVGTDRTSCFSRNKVALRMEVLCDNCP 434
Query: 667 AGGVGVYNPGFWGMNIEDGKAYNLVMYVQSPETKDLTVSLTSSDGLQNLASATI 828
GGVG+YNPGFWGMNIEDGK YNLVM+V+SPET ++TVSLTSSDGLQ LASA I
Sbjct: 435 VGGVGIYNPGFWGMNIEDGKTYNLVMHVKSPETIEMTVSLTSSDGLQVLASAAI 596
Score = 313 bits (678), Expect = 1e-084
Identities = 136/174 (78%), Positives = 147/174 (84%)
Frame = -3 / -1
Query: 827 IVAEAKFCNPSELVNETVRSFVSGD*TYITRL*AFPSSMFMPQKPGL*TPTPPAGHSSQR 648
+ AEAK C+PSELV+ETV S VSGD T ITRL* FPSSMFMPQ PGL* PTPP G SQR
Sbjct: 595 MAAEAKTCSPSELVSETVISIVSGDLTCITRL*VFPSSMFMPQNPGL*MPTPPTGQLSQR 416
Query: 647 TSILRATMFRLKHDVRSVATNTEESSPMMDHGSMFDGV*EPPASKPLLLTSSAHMPPAPA 468
TSILRAT+FRLKHDVRSV TN EESSPMMDHG +FDGV PPASKPLLLTSSAH+PPAPA
Sbjct: 415 TSILRATLFRLKHDVRSVPTNMEESSPMMDHGLIFDGVWGPPASKPLLLTSSAHIPPAPA 236
Query: 467 WLISSKNIPNSVSGIFRASCGEASTLRAAVWVASISEGRHLQPTQNRSRRQKIV 306
WLISSKNIPNSVSGIFRA CGE ST R A WV S S+ +HLQ TQ RS++Q+IV
Sbjct: 235 WLISSKNIPNSVSGIFRARCGEESTPRLATWVISNSDAKHLQLTQKRSKKQRIV 74
Score = 247 bits (533), Expect = 1e-064
Identities = 110/175 (62%), Positives = 132/175 (75%)
Frame = -2 / -3
Query: 828 YCS*SQVLQPIRAC**NC*ILCFWGLNIHNEIVGLPIFYVHAPKTWVINTNTTSWTLITE 649
Y S*SQ L P+RAC**NC FW L++HN IVGLPIFYVHAP+ V+N NT +W +ITE
Sbjct: 596 YGS*SQNL*PVRAC**NCHFYRFW*LDMHN*IVGLPIFYVHAPEPRVVNANTANWAVITE 417
Query: 648 DLHPQSNNVSTET*CTISRHKHGGVISNDGPRVDV*WSMRASSFETSVTDKLCPYATSSC 469
+LH SN VSTET* T+ HK+G VISNDGP +++*WSM AS F+TS+T+K CPY+TSSC
Sbjct: 416 NLHS*SNLVSTET*RTVCSHKYGRVISNDGPWINI*WSMGASCFKTSITNKFCPYSTSSC 237
Query: 468 MVDLLKKYPKQCFRDLPGKLWRGINLEGCCLGGLYFRRPTSAAHAE*KQKAEDCT 304
MVDLLK+Y KQ RDL K+ GIN + C LG L F T AAHAE KQ+AE+ T
Sbjct: 236 MVDLLKEYSKQRIRDLSSKVR*GINTKACHLGDLKF*CQTFAAHAEEKQEAENST 72
Score = 221 bits (478), Expect = 4e-057
Identities = 98/172 (56%), Positives = 112/172 (65%)
Frame = +3 / +2
Query: 306 YNLLPSASILRGLQMSAFGNRGHPDSSPQG*CLATACPEDP*NTVWDIF*GDQPCRSWWH 485
Y L AS+LR LQM HP P * L C +DP* VW+I *GDQPCRSWW+
Sbjct: 74 YYSLLLASLLRELQMFGIRI*DHPSGKPWC*FLTAPCSKDP*YAVWNIL*GDQPCRSWWN 253
Query: 486 MGRACQ*QRFRSWRLSYSIKHRPVVHHWR*LLRVCGD*SYIMFQSKHCCSEDGGPL**VS 665
MGR C * RF S R YSIK+ +VHHWR*L +CG+ Y+MFQSK CS++GG L**+
Sbjct: 254 MGRTC***RF*SRRPPYSIKY*SMVHHWR*LFHICGNRPYVMFQSKQGCSKNGGSL**LP 433
Query: 666 SWWCWCL*PRFLGHEHRRWEGLQSRYVCSVPRNKGSNSFINKL*WVAKLGFS 821
SW CW L P LGHEHRRWE LQS Y C V RN ++SF NKL* GFS
Sbjct: 434 SWRCWHLQPWVLGHEHRRWEDLQSSYACQVTRNDRNDSFTNKL*RATSFGFS 589
Score = 205 bits (442), Expect = 4e-052
Identities = 98/173 (56%), Positives = 109/173 (63%)
Frame = -1 / -2
Query: 820 LKPSFATHQSLLMKLLDPLFLGTEHT*RDCRPSHLLCSCPKNLGYKHQHHQLDTHHRGPP 641
LKP QSLL+KL FL T H * DCR SHLLCSCP+ G K QH QL ++HR PP
Sbjct: 588 LKPKLVARQSLLVKLSFLSFLVT*HA*LDCRSSHLLCSCPRTQGCKCQHRQLGSYHREPP 409
Query: 640 SSEQQCFD*NMMYDQSPQTRRSHLQ*WTTGRCLMEYESLQLRNLCY*QALPICHQLLHG* 461
EQ CFD*NM Y PQ +SHLQ*WT LMEY L L+NL Y*Q LPI HQLLHG*
Sbjct: 408 FLEQPCFD*NMTYGLFPQIWKSHLQ*WTMD*YLMEYGGLLLQNLYY*QVLPIFHQLLHG* 229
Query: 460 SPQKISQTVFQGSSGQAVARHQP*GLLSGWPLFPKADICSPRRIEAEGRRLYQ 302
SPQ+I QT +QGS Q R+Q GL G +ICS RR EA R Y+
Sbjct: 228 SPQRIFQTAYQGSFEQGAVRNQHQGLPLG*SQILMPNICSSRRREARSRE*YE 70
Score = 170 bits (365), Expect = 2e-041
Identities = 86/134 (64%), Positives = 88/134 (65%)
Frame = +2 / +1
Query: 422 RSLKHCLGYFLRRSTMQELVAYGQSLSVTEVSKLEALILHQTSTRGPSLEMTPPCLWRLI 601
RSL CL Y LRRSTMQELV YGQ+L V EV K EA ILHQ GPSLEMT P LW
Sbjct: 190 RSLIRCLEYSLRRSTMQELVEYGQNLLVIEVLKQEAPILHQILIHGPSLEMTLPYLWEQT 369
Query: 602 VHHVSVETLLL*GWRXXXXXXXXXXXXFITQVFGA*T*KMGRPTISLCMFSPQKQRI*QF 781
V HVSVET LL* WR F T GA*T*KMGRPTI LCM S QK+ *QF
Sbjct: 370 VRHVSVETRLL*EWRFSVITAQLAVLAFTTLGSGA*T*KMGRPTI*LCMSSHQKR*K*QF 549
Query: 782 H*QALMGCKTWLQL 823
H*QAL G K WLQL
Sbjct: 550 H*QALTGYKFWLQL 591
>gb|CA024621.1|CA024621 HZ49N06r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ49N06
5-PRIME, mRNA sequence
Length = 598
Score = 347 bits (751), Expect = 1e-094
Identities = 140/174 (80%), Positives = 152/174 (87%)
Frame = +1 / +3
Query: 259 AYRKWKPMDLKQASSGTIFCLLLLFCVGCRCRPSEIEATQTAALKVDASPQLARKIPETL 438
A K K M KQ TI C+LLLFC GC+C SE++ATQTA LKVDAS QLARKIP+TL
Sbjct: 75 ALYKMKRMGSKQVFVPTIACVLLLFCFGCKCIASELQATQTATLKVDASSQLARKIPDTL 254
Query: 439 FGIFFEEINHAGAGGIWAELVSNRGFEAGGSHTPSNIDPWSIIGDDSSVFVATDRTSCFS 618
FG+FFEEINHAGAGGIWAELVSNRGFEAGG HTPSNIDPWSIIGDDSS+FVATDRTSCFS
Sbjct: 255 FGMFFEEINHAGAGGIWAELVSNRGFEAGGLHTPSNIDPWSIIGDDSSIFVATDRTSCFS 434
Query: 619 RNIVALRMEVLCDECPAGGVGVYNPGFWGMNIEDGKAYNLVMYVQSPETKDLTV 780
RNI+ALRMEVLCD+CPA GVG+YNPGFWGMNIEDGK YNLVMYV+S E +LTV
Sbjct: 435 RNIIALRMEVLCDDCPASGVGIYNPGFWGMNIEDGKTYNLVMYVKSAEAAELTV 596
Score = 294 bits (637), Expect(2) = 2e-079
Identities = 132/172 (76%), Positives = 137/172 (79%)
Frame = -3 / -1
Query: 782 ETVRSFVSGD*TYITRL*AFPSSMFMPQKPGL*TPTPPAGHSSQRTSILRATMFRLKHDV 603
ETV S S D TYITRL* FPSSMFMPQ PGL* PTP AG SSQRTSILRA MFRLKHDV
Sbjct: 598 ETVNSAASADLTYITRL*VFPSSMFMPQNPGL*MPTPLAGQSSQRTSILRAIMFRLKHDV 419
Query: 602 RSVATNTEESSPMMDHGSMFDGV*EPPASKPLLLTSSAHMPPAPAWLISSKNIPNSVSGI 423
RSVATN EESSP++DHGS+FDGV PPASKPLLLTSSAHMPPAPAWLISSKNIPNSVSGI
Sbjct: 418 RSVATNMEESSPIIDHGSIFDGVWSPPASKPLLLTSSAHMPPAPAWLISSKNIPNSVSGI 239
Query: 422 FRASCGEASTLRAAVWVASISEGRHLQPTQNRSRRQKIVPEEACLRSIGFHL 267
FRASC EASTLR AV VA S+ HL P QNRS +V CL I F L
Sbjct: 238 FRASCDEASTLRVAVCVACNSDAMHLHPKQNRSSTHAMVGTNTCLEPIRFIL 83
Score = 239 bits (516), Expect = 3e-062
Identities = 102/172 (59%), Positives = 122/172 (70%)
Frame = +3 / +2
Query: 267 QVEAYGSQASLLWYNLLPSASILRGLQMSAFGNRGHPDSSPQG*CLATACPEDP*NTVWD 446
Q EAYG Q S+ Y+ + +A IL +QM + G D PQG*CL TACP+D +TVWD
Sbjct: 83 QDEAYGFQTSVRSYHRMRAAPILLWMQMHSIGITSDTDGHPQG*CLITACPKDTRHTVWD 262
Query: 447 IF*GDQPCRSWWHMGRACQ*QRFRSWRLSYSIKHRPVVHHWR*LLRVCGD*SYIMFQSKH 626
+F*GDQPCRS WHMGR C * RF SWR Y+IK+ P+V++WR L +CGD*SYIMFQSKH
Sbjct: 263 VF*GDQPCRSRWHMGRTC***RF*SWRTPYAIKY*PMVYNWRRLFHICGD*SYIMFQSKH 442
Query: 627 CCSEDGGPL**VSSWWCWCL*PRFLGHEHRRWEGLQSRYVCSVPRNKGSNSF 782
S DGG L**+ S WCW L P LGHEHRRW+ LQS YVC + R+ +SF
Sbjct: 443 YRS*DGGSL**LPSQWCWHLQPWVLGHEHRRWKDLQSSYVC*ISRSCRIDSF 598
Score = 224 bits (483), Expect = 9e-058
Identities = 103/171 (60%), Positives = 121/171 (70%)
Frame = -2 / -3
Query: 780 NC*ILCFWGLNIHNEIVGLPIFYVHAPKTWVINTNTTSWTLITEDLHPQSNNVSTET*CT 601
NC F NIHN IVGL IFYVHAP+ V+N NTT W +ITE+LHP+S+NVSTET*CT
Sbjct: 596 NCQFCSFC*FNIHN*IVGLSIFYVHAPEPRVVNANTTGWAVITENLHPKSDNVSTET*CT 417
Query: 600 ISRHKHGGVISNDGPRVDV*WSMRASSFETSVTDKLCPYATSSCMVDLLKKYPKQCFRDL 421
ISRHK+G V++N P V++*W M +SSF+TS+T+K CPYAT SCMVDLLKK+PKQC L
Sbjct: 416 ISRHKYGRVVANYRPWVNI*WRMESSSFKTSITNKFCPYATGSCMVDLLKKHPKQCVWYL 237
Query: 420 PGKLWRGINLEGCCLGGLYFRRPTSAAHAE*KQKAEDCTRGGLLEIHRLPL 268
GKL GINLEG L L FR A+ AE*+Q A D L H L L
Sbjct: 236 SGKL**GINLEGGRLCRL*FRCYAFASKAE*EQHACDGRNEHLFGTHTLHL 84
Score = 203 bits (437), Expect = 2e-051
Identities = 97/161 (60%), Positives = 108/161 (67%)
Frame = -1 / -2
Query: 748 HT*RDCRPSHLLCSCPKNLGYKHQHHQLDTHHRGPPSSEQQCFD*NMMYDQSPQTRRSHL 569
HT* DCR HLLCSCP+ G K QHH L +HHR PPS E+ CFD*NMMYDQSPQ +S
Sbjct: 564 HT*LDCRSFHLLCSCPRTQGCKCQHHWLGSHHREPPS*ER*CFD*NMMYDQSPQIWKSRR 385
Query: 568 Q*WTTGRCLMEYESLQLRNLCY*QALPICHQLLHG*SPQKISQTVFQGSSGQAVARHQP* 389
Q T G+ LM Y LQL+NL Y*Q LPICH+LLHG*SPQK SQTV S GQAV RHQP*
Sbjct: 384 QL*TMGQYLMAYGVLQLQNLYY*QVLPICHRLLHG*SPQKTSQTVCLVSFGQAVMRHQP* 205
Query: 388 GLLSGWPLFPKADICSPRRIEAEGRRLYQRRLA*DP*ASTC 266
G S + P IC RI A R +R L +P AS+C
Sbjct: 204 GWPSVSLVIPMLCICIQSRIGAARMRW*ERTLVWNPYASSC 82
Score = 152 bits (327), Expect(2) = 1e-037
Identities = 77/125 (61%), Positives = 80/125 (64%)
Frame = +2 / +1
Query: 407 HSLPGRSLKHCLGYFLRRSTMQELVAYGQSLSVTEVSKLEALILHQTSTRGPSLEMTPPC 586
HSLP R HCLG FLRRSTMQE VAYGQ+L V EV KLE I HQ T G L T P
Sbjct: 223 HSLPERYQTHCLGCFLRRSTMQEPVAYGQNLLVIEVLKLEDSIRHQILTHGL*LATTLPY 402
Query: 587 LWRLIVHHVSVETLLL*GWRXXXXXXXXXXXXFITQVFGA*T*KMGRPTISLCMFSPQKQ 766
LWRLIVHHVSVETL L GWR F T GA*T*KM RPTI LCM + QK
Sbjct: 403 LWRLIVHHVSVETLSLLGWRFSVMTAQPVVLAFTTLGSGA*T*KMERPTI*LCMLNQQKL 582
Query: 767 RI*QF 781
+ *QF
Sbjct: 583 QN*QF 597
Score = 24.9 bits (48), Expect(2) = 1e-037
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = +2 / +1
Query: 275 SLWISSKPPLVQSSAFCFYSAWAAD 349
S+W+ +K + S A C YSA A+
Sbjct: 91 SVWVPNKCSFLPSHACCSYSALDAN 165
Score = 22.6 bits (43), Expect(2) = 2e-079
Identities = 7/13 (53%), Positives = 10/13 (76%)
Frame = -1 / -2
Query: 259 RRR*CNECVMHPT 221
+ *C+ CVM+PT
Sbjct: 81 KEH*CSPCVMNPT 43
>gb|CA029603.1|CA029603 HZ65L02r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ65L02
5-PRIME, mRNA sequence
Length = 598
Score = 347 bits (751), Expect = 1e-094
Identities = 140/174 (80%), Positives = 152/174 (87%)
Frame = +1 / +3
Query: 259 AYRKWKPMDLKQASSGTIFCLLLLFCVGCRCRPSEIEATQTAALKVDASPQLARKIPETL 438
A K K M KQ TI C+LLLFC GC+C SE++ATQTA LKVDAS QLARKIP+TL
Sbjct: 75 ALYKMKRMGSKQVFVPTIACVLLLFCFGCKCIASELQATQTATLKVDASSQLARKIPDTL 254
Query: 439 FGIFFEEINHAGAGGIWAELVSNRGFEAGGSHTPSNIDPWSIIGDDSSVFVATDRTSCFS 618
FG+FFEEINHAGAGGIWAELVSNRGFEAGG HTPSNIDPWSIIGDDSS+FVATDRTSCFS
Sbjct: 255 FGMFFEEINHAGAGGIWAELVSNRGFEAGGLHTPSNIDPWSIIGDDSSIFVATDRTSCFS 434
Query: 619 RNIVALRMEVLCDECPAGGVGVYNPGFWGMNIEDGKAYNLVMYVQSPETKDLTV 780
RNI+ALRMEVLCD+CPA GVG+YNPGFWGMNIEDGK YNLVMYV+S E +LTV
Sbjct: 435 RNIIALRMEVLCDDCPASGVGIYNPGFWGMNIEDGKTYNLVMYVKSAEAAELTV 596
Score = 294 bits (637), Expect(2) = 2e-079
Identities = 132/172 (76%), Positives = 137/172 (79%)
Frame = -3 / -1
Query: 782 ETVRSFVSGD*TYITRL*AFPSSMFMPQKPGL*TPTPPAGHSSQRTSILRATMFRLKHDV 603
ETV S S D TYITRL* FPSSMFMPQ PGL* PTP AG SSQRTSILRA MFRLKHDV
Sbjct: 598 ETVNSAASADLTYITRL*VFPSSMFMPQNPGL*MPTPLAGQSSQRTSILRAIMFRLKHDV 419
Query: 602 RSVATNTEESSPMMDHGSMFDGV*EPPASKPLLLTSSAHMPPAPAWLISSKNIPNSVSGI 423
RSVATN EESSP++DHGS+FDGV PPASKPLLLTSSAHMPPAPAWLISSKNIPNSVSGI
Sbjct: 418 RSVATNMEESSPIIDHGSIFDGVWSPPASKPLLLTSSAHMPPAPAWLISSKNIPNSVSGI 239
Query: 422 FRASCGEASTLRAAVWVASISEGRHLQPTQNRSRRQKIVPEEACLRSIGFHL 267
FRASC EASTLR AV VA S+ HL P QNRS +V CL I F L
Sbjct: 238 FRASCDEASTLRVAVCVACNSDAMHLHPKQNRSSTHAMVGTNTCLEPIRFIL 83
Score = 239 bits (516), Expect = 3e-062
Identities = 102/172 (59%), Positives = 122/172 (70%)
Frame = +3 / +2
Query: 267 QVEAYGSQASLLWYNLLPSASILRGLQMSAFGNRGHPDSSPQG*CLATACPEDP*NTVWD 446
Q EAYG Q S+ Y+ + +A IL +QM + G D PQG*CL TACP+D +TVWD
Sbjct: 83 QDEAYGFQTSVRSYHRMRAAPILLWMQMHSIGITSDTDGHPQG*CLITACPKDTRHTVWD 262
Query: 447 IF*GDQPCRSWWHMGRACQ*QRFRSWRLSYSIKHRPVVHHWR*LLRVCGD*SYIMFQSKH 626
+F*GDQPCRS WHMGR C * RF SWR Y+IK+ P+V++WR L +CGD*SYIMFQSKH
Sbjct: 263 VF*GDQPCRSRWHMGRTC***RF*SWRTPYAIKY*PMVYNWRRLFHICGD*SYIMFQSKH 442
Query: 627 CCSEDGGPL**VSSWWCWCL*PRFLGHEHRRWEGLQSRYVCSVPRNKGSNSF 782
S DGG L**+ S WCW L P LGHEHRRW+ LQS YVC + R+ +SF
Sbjct: 443 YRS*DGGSL**LPSQWCWHLQPWVLGHEHRRWKDLQSSYVC*ISRSCRIDSF 598
Score = 224 bits (483), Expect = 9e-058
Identities = 103/171 (60%), Positives = 121/171 (70%)
Frame = -2 / -3
Query: 780 NC*ILCFWGLNIHNEIVGLPIFYVHAPKTWVINTNTTSWTLITEDLHPQSNNVSTET*CT 601
NC F NIHN IVGL IFYVHAP+ V+N NTT W +ITE+LHP+S+NVSTET*CT
Sbjct: 596 NCQFCSFC*FNIHN*IVGLSIFYVHAPEPRVVNANTTGWAVITENLHPKSDNVSTET*CT 417
Query: 600 ISRHKHGGVISNDGPRVDV*WSMRASSFETSVTDKLCPYATSSCMVDLLKKYPKQCFRDL 421
ISRHK+G V++N P V++*W M +SSF+TS+T+K CPYAT SCMVDLLKK+PKQC L
Sbjct: 416 ISRHKYGRVVANYRPWVNI*WRMESSSFKTSITNKFCPYATGSCMVDLLKKHPKQCVWYL 237
Query: 420 PGKLWRGINLEGCCLGGLYFRRPTSAAHAE*KQKAEDCTRGGLLEIHRLPL 268
GKL GINLEG L L FR A+ AE*+Q A D L H L L
Sbjct: 236 SGKL**GINLEGGRLCRL*FRCYAFASKAE*EQHACDGRNEHLFGTHTLHL 84
Score = 203 bits (437), Expect = 2e-051
Identities = 97/161 (60%), Positives = 108/161 (67%)
Frame = -1 / -2
Query: 748 HT*RDCRPSHLLCSCPKNLGYKHQHHQLDTHHRGPPSSEQQCFD*NMMYDQSPQTRRSHL 569
HT* DCR HLLCSCP+ G K QHH L +HHR PPS E+ CFD*NMMYDQSPQ +S
Sbjct: 564 HT*LDCRSFHLLCSCPRTQGCKCQHHWLGSHHREPPS*ER*CFD*NMMYDQSPQIWKSRR 385
Query: 568 Q*WTTGRCLMEYESLQLRNLCY*QALPICHQLLHG*SPQKISQTVFQGSSGQAVARHQP* 389
Q T G+ LM Y LQL+NL Y*Q LPICH+LLHG*SPQK SQTV S GQAV RHQP*
Sbjct: 384 QL*TMGQYLMAYGVLQLQNLYY*QVLPICHRLLHG*SPQKTSQTVCLVSFGQAVMRHQP* 205
Query: 388 GLLSGWPLFPKADICSPRRIEAEGRRLYQRRLA*DP*ASTC 266
G S + P IC RI A R +R L +P AS+C
Sbjct: 204 GWPSVSLVIPMLCICIQSRIGAARMRW*ERTLVWNPYASSC 82
Score = 152 bits (327), Expect(2) = 1e-037
Identities = 77/125 (61%), Positives = 80/125 (64%)
Frame = +2 / +1
Query: 407 HSLPGRSLKHCLGYFLRRSTMQELVAYGQSLSVTEVSKLEALILHQTSTRGPSLEMTPPC 586
HSLP R HCLG FLRRSTMQE VAYGQ+L V EV KLE I HQ T G L T P
Sbjct: 223 HSLPERYQTHCLGCFLRRSTMQEPVAYGQNLLVIEVLKLEDSIRHQILTHGL*LATTLPY 402
Query: 587 LWRLIVHHVSVETLLL*GWRXXXXXXXXXXXXFITQVFGA*T*KMGRPTISLCMFSPQKQ 766
LWRLIVHHVSVETL L GWR F T GA*T*KM RPTI LCM + QK
Sbjct: 403 LWRLIVHHVSVETLSLLGWRFSVMTAQPVVLAFTTLGSGA*T*KMERPTI*LCMLNQQKL 582
Query: 767 RI*QF 781
+ *QF
Sbjct: 583 QN*QF 597
Score = 24.9 bits (48), Expect(2) = 1e-037
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = +2 / +1
Query: 275 SLWISSKPPLVQSSAFCFYSAWAAD 349
S+W+ +K + S A C YSA A+
Sbjct: 91 SVWVPNKCSFLPSHACCSYSALDAN 165
Score = 22.6 bits (43), Expect(2) = 2e-079
Identities = 7/13 (53%), Positives = 10/13 (76%)
Frame = -1 / -2
Query: 259 RRR*CNECVMHPT 221
+ *C+ CVM+PT
Sbjct: 81 KEH*CSPCVMNPT 43
>gb|BU983820.1|BU983820 HA31C09r HA Hordeum vulgare subsp. vulgare cDNA clone HA31C09
5-PRIME, mRNA sequence
Length = 654
Score = 288 bits (623), Expect = 4e-077
Identities = 109/152 (71%), Positives = 133/152 (87%)
Frame = +1 / +2
Query: 736 LVMYVQSPETKDLTVSLTSSDGLQNLASATITVSGTSNWTKVEQKLVAKGTNRTSRLQIT 915
LVMY++S E+ +L SLT SDGLQN+A+A I + S+W K+E +L+AKGT RTSRL++T
Sbjct: 11 LVMYIRSLESVELAASLTCSDGLQNIATAVIVDTDVSDWRKIEMQLLAKGTCRTSRLELT 190
Query: 916 TNKKGVVWLDQVSLMPEDTYKGHGFRTELISMLLDLKPRFLRFPGGCFVEGDWLRNAFRW 1095
T+K+GV+W+DQVSL+P DTYKGHGFR ELI ML+DL+PRFLRFPGG FVEG+ LRNAFRW
Sbjct: 191 TSKRGVIWIDQVSLIPSDTYKGHGFRKELIHMLMDLRPRFLRFPGGTFVEGNLLRNAFRW 370
Query: 1096 RESIGPWEERPGHFGDVWHYWTDDGLGYYEFL 1191
RE+IGPWEERPGH+GDVW+YWTDDGLGYYE L
Sbjct: 371 RETIGPWEERPGHYGDVWNYWTDDGLGYYELL 466
Score = 196 bits (423), Expect = 2e-049
Identities = 96/153 (62%), Positives = 109/153 (71%)
Frame = -3 / -1
Query: 1190 RNS*YPSPSSVQ*CQTSPKCPGLSSHGPIDSLHLNAFLSQSPSTKQPPGNLKNRGFKSKS 1011
R+S*YP PSSVQ* QTSP PGLSSHGPI SLHL AFL++ PSTK PPGN +NRG KS S
Sbjct: 465 RSS*YPRPSSVQ*FQTSP**PGLSSHGPIVSLHLKAFLNKFPSTKVPPGNRRNRGLKSIS 286
Query: 1010 MDISSVRKPCPLYVSSGMSDT*SSQTTPFLFVVI*SLDVLLVPLATSFCSTFVQFDVPET 831
M +SS+RKP PLYVS GMSDT*S TP L VV SL+VL VPLA + S F+Q D +
Sbjct: 285 MCMSSLRKPWPLYVSEGMSDT*SIHMTPLLEVVNSSLEVLHVPLANNCISIFLQSDTSVS 106
Query: 830 VIVAEAKFCNPSELVNETVRSFVSGD*TYITRL 732
+ A A FC+PSE V+E S S D YIT L
Sbjct: 105 TMTAVAIFCSPSEHVSEAANSTDSSDLIYITSL 7
Score = 136 bits (291), Expect = 3e-031
Identities = 73/150 (48%), Positives = 96/150 (64%)
Frame = -2 / -3
Query: 1191 KELIISKPIISPVMPNIPEVSRPLFPWTN*FSPSECIS*PVTFYKTTSRKSQESWFQIQK 1012
++LII K II PV+P++ V+RPLFPWT+ F PSE IS* + F K T+RKS+E W + K
Sbjct: 466 EKLIIPKTIICPVVPDVSIVTRPLFPWTDSFPPSESIS*QIPFNKGTTRKSKEPWS*VHK 287
Query: 1011 HGYKFCAETMSLVCVFRHE*YLIKPNNSFFVRCYLKP*CSIGSFSNQLLLHFCPI*CARN 832
H Y+F A+ M+LVC+ R+E*+LI P +S F C LK * S SFS L L+ PI*
Sbjct: 286 HVYEFLAKAMALVCI*RYE*HLIDPYDSPFGSC*LKS*SSARSFS**LHLYLSPI*HICI 107
Query: 831 CYCS*SQVLQPIRAC**NC*ILCFWGLNIH 742
Y S +LQ I C *+ *+ F +IH
Sbjct: 106 YYDSCCYILQSI*TCE*SS*LHGF**SDIH 17
Score = 113 bits (242), Expect = 2e-024
Identities = 66/135 (48%), Positives = 74/135 (54%)
Frame = +2 / +3
Query: 782 H*QALMGCKTWLQLQ*QFLAHQIGQKWSRSWLLKEPIEHQGFK*QRTKKELFGLIKYHSC 961
H M CK QL * QIG++ ++ LKE E Q *Q K E +G IK HS
Sbjct: 57 HSHVQMDCKI*QQLS**IQMCQIGER*RCNY*LKERAELQDLS*QLPKGESYGSIKCHSY 236
Query: 962 LKTHTRDMVSAQNLYPCFWI*NHDS*DFLEVVL*KVTG*EMHSDGENQLVHGKRGLDTSG 1141
L+ HTR M A+N Y C W *+H S DFL V L K *EM SDG VHGKRGL T
Sbjct: 237 LQIHTRAMAFARNSYTCLWT*DHGSFDFLVVPLLKGIC*EMLSDGGKLSVHGKRGLVTME 416
Query: 1142 MFGITGLMMGLDIMS 1186
G TG MM L IMS
Sbjct: 417 TSGTTGQMMVLGIMS 461
Score = 110 bits (235), Expect = 1e-023
Identities = 54/131 (41%), Positives = 72/131 (54%)
Frame = +3 / +1
Query: 744 VCSVPRNKGSNSFINKL*WVAKLGFSYNNSFWHIKLDKSGAEAGC*RNQ*NIKASNNNEQ 923
V + R +G + F + W AK S ++ + ++L+K *RN N K NN Q
Sbjct: 19 VYQITRIRGVSCFTHMFRWTAKYSNSCHSRYRCVRLEKDRDAIIS*RNVQNFKT*VNNFQ 198
Query: 924 KRSCLA*SSITHA*RHIQGTWFPHRTYIHAFGFETTILEISWRLFCRR*LAKKCIQMERI 1103
K S + SS+TH R+IQG W T+ HA+G +TT+ ISW C R KKC QME
Sbjct: 199 KGSHMDRSSVTHTFRYIQGPWLSQGTHTHAYGLKTTVPSISWWYLC*REFVKKCFQMEGN 378
Query: 1104 NWSMGREAWTL 1136
SMGREAW+L
Sbjct: 379 YRSMGREAWSL 411
Score = 105 bits (225), Expect = 4e-022
Identities = 64/142 (45%), Positives = 81/142 (57%)
Frame = -1 / -2
Query: 1183 HNIQAHHQSSNAKHPRSVQASLPMDQLILSI*MHFLASHLLQNNLQEISRIVVSNPKAWI 1004
HN Q HH SS+++ S QASLPMD+ SI* HFL + L Q QEI VV +P A +
Sbjct: 458 HNTQDHHLSSSSRRLHSDQASLPMDR*FPSI*KHFLTNSLQQRYHQEIEGTVVLSP*ACV 279
Query: 1003 *VLCGNHVPCMCLQA*VILDQAKQLLFCSLLFEALMFYWFL*QPASAPLLSNLMCQKLLL 824
*V C +H PCM L+ *V LD++ L F LL + L F FL* ++ SNL LL
Sbjct: 278 *VPCESHGPCMYLKV*VTLDRSI*LPFWKLLTQVLKFCTFL*LIIASLSFSNLTHLYLL* 99
Query: 823 *LKPSFATHQSLLMKLLDPLFL 758
L FA H ++ +K L P L
Sbjct: 98 QLLLYFAVHLNM*VKQLTPRIL 33
>gb|BQ460354.1|BQ460354 HA09O20r HA Hordeum vulgare subsp. vulgare cDNA clone HA09O20
5-PRIME, mRNA sequence
Length = 553
Score = 282 bits (610), Expect = 3e-075
Identities = 106/149 (71%), Positives = 130/149 (87%)
Frame = +1 / +3
Query: 745 YVQSPETKDLTVSLTSSDGLQNLASATITVSGTSNWTKVEQKLVAKGTNRTSRLQITTNK 924
Y++S E+ +L SLT SDGLQN+A+A I + S+W K+E +L+AKGT RTSRL++TT+K
Sbjct: 12 YIRSLESVELAASLTCSDGLQNIATAVIVDTDVSDWRKIEMQLLAKGTCRTSRLELTTSK 191
Query: 925 KGVVWLDQVSLMPEDTYKGHGFRTELISMLLDLKPRFLRFPGGCFVEGDWLRNAFRWRES 1104
+GV+W+DQVSL+P DTYKGHGFR ELI ML+DL+PRFLRFPGG FVEG+ LRNAFRWRE+
Sbjct: 192 RGVIWIDQVSLIPSDTYKGHGFRKELIHMLMDLRPRFLRFPGGTFVEGNLLRNAFRWRET 371
Query: 1105 IGPWEERPGHFGDVWHYWTDDGLGYYEFL 1191
IGPWEERPGH+GDVW+YWTDDGLGYYE L
Sbjct: 372 IGPWEERPGHYGDVWNYWTDDGLGYYELL 458
Score = 191 bits (411), Expect = 8e-048
Identities = 93/149 (62%), Positives = 106/149 (71%)
Frame = -3 / -1
Query: 1190 RNS*YPSPSSVQ*CQTSPKCPGLSSHGPIDSLHLNAFLSQSPSTKQPPGNLKNRGFKSKS 1011
R+S*YP PSSVQ* QTSP PGLSSHGPI SLHL AFL++ PSTK PPGN +NRG KS S
Sbjct: 457 RSS*YPRPSSVQ*FQTSP**PGLSSHGPIVSLHLKAFLNKFPSTKVPPGNRRNRGLKSIS 278
Query: 1010 MDISSVRKPCPLYVSSGMSDT*SSQTTPFLFVVI*SLDVLLVPLATSFCSTFVQFDVPET 831
M +SS+RKP PLYVS GMSDT*S TP L VV SL+VL VPLA + S F+Q D +
Sbjct: 277 MCMSSLRKPWPLYVSEGMSDT*SIHMTPLLEVVNSSLEVLHVPLANNCISIFLQSDTSVS 98
Query: 830 VIVAEAKFCNPSELVNETVRSFVSGD*TY 744
+ A A FC+PSE V+E S S D Y
Sbjct: 97 TMTAVAIFCSPSEHVSEAANSTDSSDLIY 11
Score = 134 bits (288), Expect = 7e-031
Identities = 68/135 (50%), Positives = 88/135 (65%)
Frame = -2 / -3
Query: 1191 KELIISKPIISPVMPNIPEVSRPLFPWTN*FSPSECIS*PVTFYKTTSRKSQESWFQIQK 1012
++LII K II PV+P++ V+RPLFPWT+ F PSE IS* + F K T+RKS+E W + K
Sbjct: 458 EKLIIPKTIICPVVPDVSIVTRPLFPWTDSFPPSESIS*QIPFNKGTTRKSKEPWS*VHK 279
Query: 1011 HGYKFCAETMSLVCVFRHE*YLIKPNNSFFVRCYLKP*CSIGSFSNQLLLHFCPI*CARN 832
H Y+F A+ M+LVC+ R+E*+LI P +S F C LK * S SFS L L+ PI*
Sbjct: 278 HVYEFLAKAMALVCI*RYE*HLIDPYDSPFGSC*LKS*SSARSFS**LHLYLSPI*HICI 99
Query: 831 CYCS*SQVLQPIRAC 787
Y S +LQ I C
Sbjct: 98 YYDSCCYILQSI*TC 54
Score = 113 bits (242), Expect = 2e-024
Identities = 66/135 (48%), Positives = 74/135 (54%)
Frame = +2 / +1
Query: 782 H*QALMGCKTWLQLQ*QFLAHQIGQKWSRSWLLKEPIEHQGFK*QRTKKELFGLIKYHSC 961
H M CK QL * QIG++ ++ LKE E Q *Q K E +G IK HS
Sbjct: 49 HSHVQMDCKI*QQLS**IQMCQIGER*RCNY*LKERAELQDLS*QLPKGESYGSIKCHSY 228
Query: 962 LKTHTRDMVSAQNLYPCFWI*NHDS*DFLEVVL*KVTG*EMHSDGENQLVHGKRGLDTSG 1141
L+ HTR M A+N Y C W *+H S DFL V L K *EM SDG VHGKRGL T
Sbjct: 229 LQIHTRAMAFARNSYTCLWT*DHGSFDFLVVPLLKGIC*EMLSDGGKLSVHGKRGLVTME 408
Query: 1142 MFGITGLMMGLDIMS 1186
G TG MM L IMS
Sbjct: 409 TSGTTGQMMVLGIMS 453
Score = 110 bits (235), Expect = 1e-023
Identities = 54/131 (41%), Positives = 72/131 (54%)
Frame = +3 / +2
Query: 744 VCSVPRNKGSNSFINKL*WVAKLGFSYNNSFWHIKLDKSGAEAGC*RNQ*NIKASNNNEQ 923
V + R +G + F + W AK S ++ + ++L+K *RN N K NN Q
Sbjct: 11 VYQITRIRGVSCFTHMFRWTAKYSNSCHSRYRCVRLEKDRDAIIS*RNVQNFKT*VNNFQ 190
Query: 924 KRSCLA*SSITHA*RHIQGTWFPHRTYIHAFGFETTILEISWRLFCRR*LAKKCIQMERI 1103
K S + SS+TH R+IQG W T+ HA+G +TT+ ISW C R KKC QME
Sbjct: 191 KGSHMDRSSVTHTFRYIQGPWLSQGTHTHAYGLKTTVPSISWWYLC*REFVKKCFQMEGN 370
Query: 1104 NWSMGREAWTL 1136
SMGREAW+L
Sbjct: 371 YRSMGREAWSL 403
Score = 105 bits (225), Expect = 4e-022
Identities = 64/142 (45%), Positives = 81/142 (57%)
Frame = -1 / -2
Query: 1183 HNIQAHHQSSNAKHPRSVQASLPMDQLILSI*MHFLASHLLQNNLQEISRIVVSNPKAWI 1004
HN Q HH SS+++ S QASLPMD+ SI* HFL + L Q QEI VV +P A +
Sbjct: 450 HNTQDHHLSSSSRRLHSDQASLPMDR*FPSI*KHFLTNSLQQRYHQEIEGTVVLSP*ACV 271
Query: 1003 *VLCGNHVPCMCLQA*VILDQAKQLLFCSLLFEALMFYWFL*QPASAPLLSNLMCQKLLL 824
*V C +H PCM L+ *V LD++ L F LL + L F FL* ++ SNL LL
Sbjct: 270 *VPCESHGPCMYLKV*VTLDRSI*LPFWKLLTQVLKFCTFL*LIIASLSFSNLTHLYLL* 91
Query: 823 *LKPSFATHQSLLMKLLDPLFL 758
L FA H ++ +K L P L
Sbjct: 90 QLLLYFAVHLNM*VKQLTPRIL 25
>gb|BU967351.1|BU967351 HB04A14r BC Hordeum vulgare subsp. vulgare cDNA clone HB04A14
5-PRIME, mRNA sequence
Length = 667
Score = 234 bits (506), Expect = 6e-061
Identities = 86/109 (78%), Positives = 102/109 (93%)
Frame = +1 / +2
Query: 865 QKLVAKGTNRTSRLQITTNKKGVVWLDQVSLMPEDTYKGHGFRTELISMLLDLKPRFLRF 1044
++L+AKGT RTSRL++TT+K+GV+W+DQVSL+P DTYKGHGFR ELI ML+DL+PRFLRF
Sbjct: 8 RQLLAKGTCRTSRLELTTSKRGVIWIDQVSLIPSDTYKGHGFRKELIHMLMDLRPRFLRF 187
Query: 1045 PGGCFVEGDWLRNAFRWRESIGPWEERPGHFGDVWHYWTDDGLGYYEFL 1191
PGG FVEG+ LRNAFRWRE+IGPWEERPGH+GDVW+YWTDDGLGYYE L
Sbjct: 188 PGGTFVEGNLLRNAFRWRETIGPWEERPGHYGDVWNYWTDDGLGYYELL 334
Score = 160 bits (343), Expect = 2e-038
Identities = 76/107 (71%), Positives = 84/107 (78%)
Frame = -3 / -2
Query: 1190 RNS*YPSPSSVQ*CQTSPKCPGLSSHGPIDSLHLNAFLSQSPSTKQPPGNLKNRGFKSKS 1011
R+S*YP PSSVQ* QTSP PGLSSHGPI SLHL AFL++ PSTK PPGN +NRG KS S
Sbjct: 333 RSS*YPRPSSVQ*FQTSP**PGLSSHGPIVSLHLKAFLNKFPSTKVPPGNRRNRGLKSIS 154
Query: 1010 MDISSVRKPCPLYVSSGMSDT*SSQTTPFLFVVI*SLDVLLVPLATS 870
M +SS+RKP PLYVS GMSDT*S TP L VV SL+VL VPLA +
Sbjct: 153 MCMSSLRKPWPLYVSEGMSDT*SIHMTPLLEVVNSSLEVLHVPLANN 13
Score = 125 bits (268), Expect = 4e-028
Identities = 57/105 (54%), Positives = 75/105 (71%)
Frame = -2 / -1
Query: 1191 KELIISKPIISPVMPNIPEVSRPLFPWTN*FSPSECIS*PVTFYKTTSRKSQESWFQIQK 1012
++LII K II PV+P++ V+RPLFPWT+ F PSE IS* + F K T+RKS+E W + K
Sbjct: 334 EKLIIPKTIICPVVPDVSIVTRPLFPWTDSFPPSESIS*QIPFNKGTTRKSKEPWS*VHK 155
Query: 1011 HGYKFCAETMSLVCVFRHE*YLIKPNNSFFVRCYLKP*CSIGSFS 877
H Y+F A+ M+LVC+ R+E*+LI P +S F C LK * S SFS
Sbjct: 154 HVYEFLAKAMALVCI*RYE*HLIDPYDSPFGSC*LKS*SSARSFS 20
Score = 103 bits (219), Expect = 2e-021
Identities = 56/103 (54%), Positives = 60/103 (58%)
Frame = +2 / +3
Query: 878 LKEPIEHQGFK*QRTKKELFGLIKYHSCLKTHTRDMVSAQNLYPCFWI*NHDS*DFLEVV 1057
LKE E Q *Q K E +G IK HS L+ HTR M A+N Y C W *+H S DFL V
Sbjct: 21 LKERAELQDLS*QLPKGESYGSIKCHSYLQIHTRAMAFARNSYTCLWT*DHGSFDFLVVP 200
Query: 1058 L*KVTG*EMHSDGENQLVHGKRGLDTSGMFGITGLMMGLDIMS 1186
L K *EM SDG VHGKRGL T G TG MM L IMS
Sbjct: 201 LLKGIC*EMLSDGGKLSVHGKRGLVTMETSGTTGQMMVLGIMS 329
>gb|BM374077.2|BM374077 EBma03_SQ003_J08_R maternal, 8 DPA, no treatment, cv Optic, EBma03
Hordeum vulgare subsp. vulgare cDNA clone
EBma03_SQ003_J08 5', mRNA sequence
Length = 659
Score = 218 bits (471), Expect(2) = 4e-059
Identities = 88/129 (68%), Positives = 102/129 (79%)
Frame = +1 / +3
Query: 319 LLLLFCVGCRCRPSEIEATQTAALKVDASPQLARKIPETLFGIFFEEINHAGAGGIWAEL 498
LLL GC +E+E QTA L+VD S + ARKIP+TLFG+FFEEINHAGAGG+WAEL
Sbjct: 123 LLLSLSCGCLALAAELEGAQTALLQVDTSWKAARKIPQTLFGLFFEEINHAGAGGLWAEL 302
Query: 499 VSNRGFEAGGSHTPSNIDPWSIIGDDSSVFVATDRTSCFSRNIVALRMEVLCDECPAGGV 678
VSN+GFE GG HTPSNIDPWSIIGD+SS++V T+RTSCFSRNIVALRME+LC +CPAG
Sbjct: 303 VSNKGFETGGPHTPSNIDPWSIIGDESSIYVKTERTSCFSRNIVALRMEILCAKCPAGRC 482
Query: 679 GVYNPGFWG 705
P G
Sbjct: 483 WYLQPRILG 509
Score = 159 bits (341), Expect(2) = 1e-056
Identities = 74/120 (61%), Positives = 84/120 (70%)
Frame = -3 / -2
Query: 671 PAGHSSQRTSILRATMFRLKHDVRSVATNTEESSPMMDHGSMFDGV*EPPASKPLLLTSS 492
PAGH +QR SILRAT+F LK DV SV T E+SSPM+DHGSMF+GV* PP SKPLLLTSS
Sbjct: 475 PAGHLAQRISILRATIFLLKQDVLSVFTYMEDSSPMIDHGSMFEGV*GPPVSKPLLLTSS 296
Query: 491 AHMPPAPAWLISSKNIPNSVSGIFRASCGEASTLRAAVWVASISEGRHLQPTQNRSRRQK 312
AH PPAPAWLISSKN P V GIF A+ + ST +AV S S P N R ++
Sbjct: 295 AHNPPAPAWLISSKNKPKRV*GIFLAAFHDVSTCSSAV*APSSSAASARHPQLNERRSKE 116
Score = 106 bits (227), Expect(2) = 6e-048
Identities = 40/61 (65%), Positives = 51/61 (83%)
Frame = +1 / +1
Query: 670 GGVGVYNPGFWGMNIEDGKAYNLVMYVQSPETKDLTVSLTSSDGLQNLASATITVSGTSN 849
GGVG+YNPGFWGMNIE+GK+YNLVMY++S E+ +L SLT SDGLQN+A+A I + S+
Sbjct: 475 GGVGIYNPGFWGMNIEEGKSYNLVMYIRSLESVELAASLTCSDGLQNIATAVIVDTDVSD 654
Query: 850 W 852
W
Sbjct: 655 W 657
Score = 105 bits (223), Expect(2) = 2e-033
Identities = 47/87 (54%), Positives = 62/87 (71%)
Frame = -2 / -1
Query: 669 SWTLITEDLHPQSNNVSTET*CTISRHKHGGVISNDGPRVDV*WSMRASSFETSVTDKLC 490
SWTL T++ HP SN++STET C+ S H +GG ++ND P + V* S+R S F+T VTDKL
Sbjct: 473 SWTLGTKNFHP*SNDISTETRCSFSLHVYGGFVTNDRPWIYV*RSVRPSGFKTFVTDKLR 294
Query: 489 PYATSSCMVDLLKKYPKQCFRDLPGKL 409
P +TSS +VD LK+ K+ RDL G L
Sbjct: 293 P*STSSSVVDFLKEQAKEGLRDLSGGL 213
Score = 105 bits (223), Expect(2) = 6e-048
Identities = 48/102 (47%), Positives = 63/102 (61%)
Frame = +3 / +2
Query: 366 RGHPDSSPQG*CLATACPEDP*NTVWDIF*GDQPCRSWWHMGRACQ*QRFRSWRLSYSIK 545
RG D + + +DP N +W + *G+QP SWW MG ACQ*QRF + R S+S K
Sbjct: 170 RGGSDGAATSRYIMEGRQKDPSNPLWLVL*GNQPRWSWWIMGGACQ*QRF*NRRASHSFK 349
Query: 546 HRPVVHHWR*LLRVCGD*SYIMFQSKHCCSEDGGPL**VSSW 671
HR +V+HW +L + D* I+FQ K+ CS+DG L VSSW
Sbjct: 350 HRSMVYHW*RILHIRED*KNILFQ*KYRCSKDGNSLCQVSSW 475
Score = 89.0 bits (188), Expect(2) = 5e-025
Identities = 45/83 (54%), Positives = 54/83 (65%)
Frame = -1 / -3
Query: 670 QLDTHHRGPPSSEQQCFD*NMMYDQSPQTRRSHLQ*WTTGRCLMEYESLQLRNLCY*QAL 491
QLDT H+ PS EQ+ F *N M+ QS + R Q* T CL E E+L+ +NLCY*QA
Sbjct: 474 QLDTWHKEFPSLEQRYFY*NKMFFQSSRIWRIRHQ**TMDLCLKECEALRFQNLCY*QAP 295
Query: 490 PICHQLLHG*SPQKISQTVFQGS 422
PI HQL G* PQ+ SQ F+GS
Sbjct: 294 PIIHQLQRG*FPQRTSQRGFEGS 226
Score = 82.2 bits (173), Expect(2) = 1e-056
Identities = 37/63 (58%), Positives = 43/63 (68%)
Frame = -3 / -1
Query: 854 VQFDVPETVIVAEAKFCNPSELVNETVRSFVSGD*TYITRL*AFPSSMFMPQKPGL*TPT 675
+Q D + + A A FC+PSE V+E S S D YITRL* FPSSMFMPQ PGL* PT
Sbjct: 659 LQSDTSVSTMTAVAIFCSPSEHVSEAANSTDSSDLIYITRL*LFPSSMFMPQNPGL*IPT 480
Query: 674 PPA 666
PP+
Sbjct: 479 PPS 471
Score = 79.9 bits (168), Expect(2) = 1e-024
Identities = 44/77 (57%), Positives = 48/77 (62%)
Frame = +2 / +1
Query: 416 PGRSLKHCLGYFLRRSTMQELVAYGQSLSVTEVSKLEALILHQTSTRGPSLEMTPPCLWR 595
P RSLK L LR+ST ELV YG+SLSVT+V K E L L QT G SL PP R
Sbjct: 220 PERSLKPSLACSLRKSTTLELVDYGRSLSVTKVLKPEGLTLLQT*IHGLSLVTNPPYT*R 399
Query: 596 LIVHHVSVETLLL*GWR 646
L H VSVE LL*GW+
Sbjct: 400 LKEHLVSVEISLL*GWK 450
Score = 58.3 bits (121), Expect(2) = 2e-033
Identities = 26/52 (50%), Positives = 35/52 (67%)
Frame = -2 / -3
Query: 828 YCS*SQVLQPIRAC**NC*ILCFWGLNIHNEIVGLPIFYVHAPKTWVINTNT 673
Y S +LQ I C *+ *+ F +IH +I+ LP FYVHAP++WV+NTNT
Sbjct: 633 YDSCCYILQSI*TCE*SS*LHGF**SDIHYQIIALPFFYVHAPESWVVNTNT 478
Score = 53.8 bits (111), Expect(2) = 1e-024
Identities = 24/60 (40%), Positives = 34/60 (56%)
Frame = +3 / +3
Query: 675 CWCL*PRFLGHEHRRWEGLQSRYVCSVPRNKGSNSFINKL*WVAKLGFSYNNSFWHIKLD 854
CW L PR LGHEHRR E L S V + R +G + F + W AK S ++ + ++L+
Sbjct: 480 CWYLQPRILGHEHRRREEL*SGNVYQITRIRGVSCFTHMFRWTAKYSNSCHSRYRCVRLE 659
Score = 46.0 bits (94), Expect(2) = 5e-025
Identities = 27/60 (45%), Positives = 33/60 (55%)
Frame = -1 / -2
Query: 853 SNLMCQKLLL*LKPSFATHQSLLMKLLDPLFLGTEHT*RDCRPSHLLCSCPKNLGYKHQH 674
SNL LL L FA H ++ +K L P L +T D S LLCSCP+ LG K+QH
Sbjct: 658 SNLTHLYLL*QLLLYFAVHLNM*VKQLTPRILVI*YTLPDYSSSLLLCSCPRILGCKYQH 479
Score = 30.4 bits (60), Expect(2) = 4e-059
Identities = 24/57 (42%), Positives = 25/57 (43%)
Frame = +2 / +2
Query: 683 FITQVFGA*T*KMGRPTISLCMFSPQKQRI*QFH*QALMGCKTWLQLQ*QFLAHQIG 853
F TQ GA*T*K GR I C+ * H M CK QL * QIG
Sbjct: 488 FTTQDSGA*T*KKGRAIIW*CISDH*NPWS*LLHSHVQMDCKI*QQLS**IQMCQIG 658
>gb|CA029014.1|CA029014 HZ63P04r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ63P04
5-PRIME, mRNA sequence
Length = 379
Score = 214 bits (461), Expect(2) = 2e-057
Identities = 81/113 (71%), Positives = 99/113 (87%)
Frame = +1 / +1
Query: 526 GSHTPSNIDPWSIIGDDSSVFVATDRTSCFSRNIVALRMEVLCDECPAGGVGVYNPGFWG 705
G HTPSNIDPWSIIGD+SS++V T+RTSCFSRNIVALRME+LC +CPAGGVG+YNPGFWG
Sbjct: 37 GLHTPSNIDPWSIIGDESSIYVKTERTSCFSRNIVALRMEILCAKCPAGGVGIYNPGFWG 216
Query: 706 MNIEDGKAYNLVMYVQSPETKDLTVSLTSSDGLQNLASATITVSGTSNWTKVE 864
MNIE+GK+YNLVMY++S E+ +L SLT SDGLQN+A+A I + S+W K+E
Sbjct: 217 MNIEEGKSYNLVMYIRSLESVELAASLTCSDGLQNIATAVIVDTDVSDWRKIE 375
Score = 160 bits (343), Expect(2) = 2e-041
Identities = 73/117 (62%), Positives = 83/117 (70%)
Frame = -3 / -3
Query: 863 STFVQFDVPETVIVAEAKFCNPSELVNETVRSFVSGD*TYITRL*AFPSSMFMPQKPGL* 684
S F+Q D + + A A FC+PSE V+E S S D YITRL* FPSSMFMPQ PGL*
Sbjct: 374 SIFLQSDTSVSTMTAVAIFCSPSEHVSEAANSTDSSDLIYITRL*LFPSSMFMPQNPGL* 195
Query: 683 TPTPPAGHSSQRTSILRATMFRLKHDVRSVATNTEESSPMMDHGSMFDGV*EPPASK 513
PTPPAGH +QR SILRAT+F LK DV SV T E+SSPM+DHGSMF+GV P K
Sbjct: 194 IPTPPAGHLAQRISILRATIFLLKQDVLSVFTYMEDSSPMIDHGSMFEGVXRPSGFK 24
Score = 118 bits (252), Expect(2) = 2e-027
Identities = 55/113 (48%), Positives = 75/113 (66%)
Frame = -2 / -2
Query: 864 LHFCPI*CARNCYCS*SQVLQPIRAC**NC*ILCFWGLNIHNEIVGLPIFYVHAPKTWVI 685
L+ PI* Y S +LQ I C *+ *+ F +IH +I+ LP FYVHAP++WV+
Sbjct: 375 LYLSPI*HICIYYDSCCYILQSI*TCE*SS*LHGF**SDIHYQIIALPFFYVHAPESWVV 196
Query: 684 NTNTTSWTLITEDLHPQSNNVSTET*CTISRHKHGGVISNDGPRVDV*WSMRA 526
NTNT SWTL T++ HP SN++STET C+ S H +GG ++ND P + V* S+ A
Sbjct: 195 NTNTASWTLGTKNFHP*SNDISTETRCSFSLHVYGGFVTNDRPWIYV*RSVXA 37
Score = 105 bits (224), Expect = 5e-022
Identities = 48/108 (44%), Positives = 66/108 (61%)
Frame = +3 / +3
Query: 534 YSIKHRPVVHHWR*LLRVCGD*SYIMFQSKHCCSEDGGPL**VSSWWCWCL*PRFLGHEH 713
+S KHR +V+HW +L + D* I+FQ K+ CS+DG L VSSW CW L PR LGHEH
Sbjct: 45 HSFKHRSMVYHW*RILHIRED*KNILFQ*KYRCSKDGNSLCQVSSWRCWYLQPRILGHEH 224
Query: 714 RRWEGLQSRYVCSVPRNKGSNSFINKL*WVAKLGFSYNNSFWHIKLDK 857
RR E L S V + R +G + F + W AK S ++ + ++L+K
Sbjct: 225 RRREEL*SGNVYQITRIRGVSCFTHMFRWTAKYSNSCHSRYRCVRLEK 368
Score = 29.9 bits (59), Expect(2) = 2e-041
Identities = 12/12 (100%), Positives = 12/12 (100%)
Frame = -3 / -1
Query: 527 PPASKPLLLTSS 492
PPASKPLLLTSS
Sbjct: 37 PPASKPLLLTSS 2
Score = 29.5 bits (58), Expect(2) = 2e-057
Identities = 11/12 (91%), Positives = 12/12 (100%)
Frame = +1 / +3
Query: 493 ELVSNRGFEAGG 528
ELVSN+GFEAGG
Sbjct: 3 ELVSNKGFEAGG 38
Score = 24.4 bits (47), Expect(2) = 2e-027
Identities = 9/12 (75%), Positives = 12/12 (100%)
Frame = -1 / -2
Query: 529 SLQLRNLCY*QA 494
+L+L+NLCY*QA
Sbjct: 39 ALRLQNLCY*QA 4
>gb|BU979580.1|BU979580 HA16J20r HA Hordeum vulgare subsp. vulgare cDNA clone HA16J20
5-PRIME, mRNA sequence
Length = 372
Score = 220 bits (474), Expect = 2e-056
Identities = 84/104 (80%), Positives = 96/104 (92%)
Frame = +1 / +2
Query: 415 ARKIPETLFGIFFEEINHAGAGGIWAELVSNRGFEAGGSHTPSNIDPWSIIGDDSSVFVA 594
ARKIP+TLFG+ EEINHAGAGG+WAELVSN+GFEAGG TPSNIDPWSIIGD+SS++V
Sbjct: 59 ARKIPQTLFGLXXEEINHAGAGGLWAELVSNKGFEAGGPDTPSNIDPWSIIGDESSIYVK 238
Query: 595 TDRTSCFSRNIVALRMEVLCDECPAGGVGVYNPGFWGMNIEDGK 726
T+RTS SRNIVALRME+LC +CPAGGVG+YNPGFWGMNIE+GK
Sbjct: 239 TERTSXXSRNIVALRMEILCAKCPAGGVGIYNPGFWGMNIEEGK 370
Score = 180 bits (387), Expect = 2e-044
Identities = 79/105 (75%), Positives = 85/105 (80%)
Frame = -3 / -1
Query: 725 FPSSMFMPQKPGL*TPTPPAGHSSQRTSILRATMFRLKHDVRSVATNTEESSPMMDHGSM 546
FPSSMFMPQ PGL* PTPPAGH +QR SILRAT+F L DV SV T E+SSPM+DHGSM
Sbjct: 369 FPSSMFMPQNPGL*IPTPPAGHLAQRISILRATIFLLXXDVLSVFTYMEDSSPMIDHGSM 190
Query: 545 FDGV*EPPASKPLLLTSSAHMPPAPAWLISSKNIPNSVSGIFRAS 411
F+GV PPASKPLLLTSSAH PPAPAWLISSK P V GIF A+
Sbjct: 189 FEGVSGPPASKPLLLTSSAHNPPAPAWLISSKXKPKRV*GIFLAA 55
Score = 137 bits (293), Expect = 1e-031
Identities = 58/106 (54%), Positives = 75/106 (70%)
Frame = -2 / -3
Query: 726 LPIFYVHAPKTWVINTNTTSWTLITEDLHPQSNNVSTET*CTISRHKHGGVISNDGPRVD 547
LP FYVHAP++WV+NTNT SWTL T++ HP SN++ST C+ S H +GG ++ND P +
Sbjct: 370 LPFFYVHAPESWVVNTNTASWTLGTKNFHP*SNDISTAXRCSFSLHVYGGFVTNDRPWIY 191
Query: 546 V*WSMRASSFETSVTDKLCPYATSSCMVDLLKKYPKQCFRDLPGKL 409
V* S+R S F+T VTDKL P +TSS +VD L K+ RDL G L
Sbjct: 190 V*RSVRPSGFKTFVTDKLRP*STSSSVVDFLXXQAKEGLRDLSGGL 53
Score = 124 bits (266), Expect = 8e-028
Identities = 56/102 (54%), Positives = 66/102 (64%)
Frame = +3 / +1
Query: 420 EDP*NTVWDIF*GDQPCRSWWHMGRACQ*QRFRSWRLSYSIKHRPVVHHWR*LLRVCGD* 599
+DP N +W G+QP SWW MG ACQ*QRF S R +S KHR +V+HW +L + D*
Sbjct: 64 KDPSNPLWLXLXGNQPRWSWWIMGGACQ*QRF*SRRA*HSFKHRSMVYHW*RILHIRED* 243
Query: 600 SYIMFQSKHCCSEDGGPL**VSSWWCWCL*PRFLGHEHRRWE 725
I Q K+ CS+DG L VSSW CW L PR LGHEHRR E
Sbjct: 244 KNIXXQ*KYRCSKDGNSLCQVSSWRCWYLQPRILGHEHRRRE 369
Score = 109 bits (233), Expect = 3e-023
Identities = 54/101 (53%), Positives = 65/101 (64%)
Frame = -1 / -2
Query: 724 SHLLCSCPKNLGYKHQHHQLDTHHRGPPSSEQQCFD*NMMYDQSPQTRRSHLQ*WTTGRC 545
S LLCSCP+ LG K+QH QLDT H+ PS EQ+ F M+ QS + R Q* T C
Sbjct: 368 SLLLCSCPRILGCKYQHRQLDTWHKEFPSLEQRYFYCXXMFFQSSRIWRIRHQ**TMDLC 189
Query: 544 LMEYESLQLRNLCY*QALPICHQLLHG*SPQKISQTVFQGS 422
L E ++L+L+NLCY*QA PI HQL G* P SQ F+GS
Sbjct: 188 LKECQALRLQNLCY*QAPPIIHQLQRG*FPXXXSQRGFEGS 66
>gb|BI949335.1|BI949335 HVSMEl0013G12f Hordeum vulgare spike EST library HVcDNA0012
(Fusarium infected) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEl0013G12f, mRNA sequence
Length = 489
Score = 217 bits (468), Expect = 1e-055
Identities = 86/120 (71%), Positives = 100/120 (83%)
Frame = +1 / +3
Query: 319 LLLLFCVGCRCRPSEIEATQTAALKVDASPQLARKIPETLFGIFFEEINHAGAGGIWAEL 498
LLL GC +E+E TA L+VD S + ARKIP+TLFG+FFEEINHAGAGG+WAEL
Sbjct: 129 LLLSLSCGCLALAAELEGAHTALLQVDTSWKAARKIPQTLFGLFFEEINHAGAGGLWAEL 308
Query: 499 VSNRGFEAGGSHTPSNIDPWSIIGDDSSVFVATDRTSCFSRNIVALRMEVLCDECPAGGV 678
VSN+GFEAGG HTPSNIDPWSIIGD+SS++V T+RTSCFSRNIVAL ME+LC +CP GGV
Sbjct: 309 VSNKGFEAGGPHTPSNIDPWSIIGDESSIYVKTERTSCFSRNIVALTMEILCAKCPTGGV 488
Score = 163 bits (350), Expect = 2e-039
Identities = 75/122 (61%), Positives = 86/122 (70%)
Frame = -3 / -3
Query: 677 TPPAGHSSQRTSILRATMFRLKHDVRSVATNTEESSPMMDHGSMFDGV*EPPASKPLLLT 498
TPP GH +QR SI+RAT+F LK DV SV T E+SSPM+DHGSMF+GV* PPASKPLLLT
Sbjct: 487 TPPVGHLAQRISIVRATIFLLKQDVLSVFTYMEDSSPMIDHGSMFEGV*GPPASKPLLLT 308
Query: 497 SSAHMPPAPAWLISSKNIPNSVSGIFRASCGEASTLRAAVWVASISEGRHLQPTQNRSRR 318
SSAH PPAPAWLISSKN P V GIF A+ + ST +AV S S P N R
Sbjct: 307 SSAHNPPAPAWLISSKNKPKRV*GIFLAAFHDVSTCSSAV*APSSSAASARHPQLNERRS 128
Query: 317 QK 312
++
Sbjct: 127 KE 122
Score = 103 bits (219), Expect = 2e-021
Identities = 45/84 (53%), Positives = 57/84 (67%)
Frame = +3 / +2
Query: 420 EDP*NTVWDIF*GDQPCRSWWHMGRACQ*QRFRSWRLSYSIKHRPVVHHWR*LLRVCGD* 599
+DP N +W + *G+QP SWW MG ACQ*QRF S R S+S KHR +V+HW +L + D*
Sbjct: 230 KDPSNPLWLVL*GNQPRWSWWIMGGACQ*QRF*SRRASHSFKHRSMVYHW*RILHIRED* 409
Query: 600 SYIMFQSKHCCSEDGGPL**VSSW 671
I+FQ K+ CS DG L VS+W
Sbjct: 410 KNILFQ*KYRCSNDGNSLCQVSNW 481
Score = 103 bits (219), Expect = 2e-021
Identities = 47/90 (52%), Positives = 62/90 (68%)
Frame = -2 / -2
Query: 678 NTTSWTLITEDLHPQSNNVSTET*CTISRHKHGGVISNDGPRVDV*WSMRASSFETSVTD 499
N SWTL T++ H SN++STET C+ S H +GG ++ND P + V* S+R S F+T VTD
Sbjct: 488 NPASWTLGTKNFHR*SNDISTETRCSFSLHVYGGFVTNDRPWIYV*RSVRPSGFKTFVTD 309
Query: 498 KLCPYATSSCMVDLLKKYPKQCFRDLPGKL 409
KL P +TSS +VD LK+ K+ RDL G L
Sbjct: 308 KLRP*STSSSVVDFLKEQAKEGLRDLSGGL 219
>gb|BF627539.2|BF627539 HVSMEb0005C01f Hordeum vulgare seedling shoot EST library
HVcDNA0002 (Dehydration stress) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEb0005C01f, mRNA sequence
Length = 789
Score = 206 bits (444), Expect = 2e-052
Identities = 89/131 (67%), Positives = 101/131 (77%)
Frame = +1 / +3
Query: 259 AYRKWKPMDLKQASSGTIFCLLLLFCVGCRCRPSEIEATQTAALKVDASPQLARKIPETL 438
A K K M KQ TI C+LLLFC GC+C SE++ATQTA LKVDAS QLARKIP+TL
Sbjct: 84 ALYKMKRMGSKQVFVPTIACVLLLFCFGCKCIASELQATQTATLKVDASSQLARKIPDTL 263
Query: 439 FGIFFEEINHAGAGGIWAELVSNRGFEAGGSHTPSNIDPWSIIGDDSSVFVATDRTSCFS 618
FG+FFEEINHA AGGIWAELVS+RGFEAGG H P N+DPWSI+GDDS + V TDRT C S
Sbjct: 264 FGMFFEEINHA*AGGIWAELVSDRGFEAGGLHAPWNMDPWSIVGDDSFICVVTDRT*CRS 443
Query: 619 RNIVALRMEVL 651
+I RM+ L
Sbjct: 444 LSIGRRRMDGL 476
Score = 189 bits (408), Expect(2) = 4e-048
Identities = 88/146 (60%), Positives = 98/146 (67%)
Frame = -3 / -3
Query: 704 PQKPGL*TPTPPAGHSSQRTSILRATMFRLKHDVRSVATNTEESSPMMDHGSMFDGV*EP 525
P+ P + P S + SILR M RL+H VRSV T+ +ESSP +DHGS+F G P
Sbjct: 529 PRVPRVVHGAPMHPRSWRNPSILRRPMLRLRHHVRSVTTHMKESSPTIDHGSIFHGAWSP 350
Query: 524 PASKPLLLTSSAHMPPAPAWLISSKNIPNSVSGIFRASCGEASTLRAAVWVASISEGRHL 345
PAS PL LTSSAHMPPA AWLISSKNIPNSVSGIFRASC EASTLR AV VA S+ HL
Sbjct: 349 PASNPLSLTSSAHMPPAHAWLISSKNIPNSVSGIFRASCDEASTLRVAVCVACNSDAMHL 170
Query: 344 QPTQNRSRRQKIVPEEACLRSIGFHL 267
P QNRS +V CL I F L
Sbjct: 169 HPKQNRSSTHAMVGTNTCLEPIRFIL 92
Score = 161 bits (346), Expect = 7e-039
Identities = 67/126 (53%), Positives = 87/126 (69%)
Frame = +3 / +2
Query: 267 QVEAYGSQASLLWYNLLPSASILRGLQMSAFGNRGHPDSSPQG*CLATACPEDP*NTVWD 446
Q EAYG Q S+ Y+ + +A IL +QM + G D PQG*CL TACP+D +TVWD
Sbjct: 92 QDEAYGFQTSVRSYHRMRAAPILLWMQMHSIGITSDTDGHPQG*CLITACPKDTRHTVWD 271
Query: 447 IF*GDQPCRSWWHMGRACQ*QRFRSWRLSYSIKHRPVVHHWR*LLRVCGD*SYIMFQSKH 626
+F*GDQPC S WHMGR C+* R SWR ++++ P+V+ WR L +CGD*S++M QS+H
Sbjct: 272 VF*GDQPCMSRWHMGRTCE**RV*SWRTPCTMEYGPMVYSWRRLFHMCGD*SHMMSQSEH 451
Query: 627 CCSEDG 644
SEDG
Sbjct: 452 WSSEDG 469
Score = 131 bits (280), Expect = 9e-030
Identities = 64/131 (48%), Positives = 79/131 (60%)
Frame = -2 / -2
Query: 660 LITEDLHPQSNNVSTET*CTISRHKHGGVISNDGPRVDV*WSMRASSFETSVTDKLCPYA 481
++ + +HP + N T T C IS H + V++N P V + W M +SSF+ S+T K CPYA
Sbjct: 485 VMAQPVHPPTTNAQTATSCAISHHTYERVVANYRPWVHIPWCMESSSFKPSITHKFCPYA 306
Query: 480 TSSCMVDLLKKYPKQCFRDLPGKLWRGINLEGCCLGGLYFRRPTSAAHAE*KQKAEDCTR 301
T SCMVDLLKK+PKQC L GKL GINLEG L L FR A+ AE*+Q A D
Sbjct: 305 TGSCMVDLLKKHPKQCVWYLSGKL**GINLEGGRLCRL*FRCYAFASKAE*EQHACDGRN 126
Query: 300 GGLLEIHRLPL 268
L H L L
Sbjct: 125 EHLFGTHTLHL 93
Score = 118 bits (252), Expect = 7e-026
Identities = 64/131 (48%), Positives = 77/131 (58%)
Frame = -1 / -1
Query: 658 HHRGPPSSEQQCFD*NMMYDQSPQTRRSHLQ*WTTGRCLMEYESLQLRNLCY*QALPICH 479
H PSS+ QC D ++M DQSP +S Q T G M + LQL+ L + Q LPICH
Sbjct: 483 HGATRPSSDDQCSDCDIMCDQSPHI*KSRRQL*TMGPYSMVHGVLQLQTLYHSQVLPICH 304
Query: 478 QLLHG*SPQKISQTVFQGSSGQAVARHQP*GLLSGWPLFPKADICSPRRIEAEGRRLYQR 299
+L+HG*SPQK SQTV S GQAV RHQP*G S + P IC RI A R +R
Sbjct: 303 RLMHG*SPQKTSQTVCLVSFGQAVMRHQP*GWPSVSLVIPMLCICIQSRIGAARMRW*ER 124
Query: 298 RLA*DP*ASTC 266
L +P AS+C
Sbjct: 123 TLVWNPYASSC 91
Score = 22.6 bits (43), Expect(2) = 4e-048
Identities = 7/13 (53%), Positives = 10/13 (76%)
Frame = -1 / -1
Query: 259 RRR*CNECVMHPT 221
+ *C+ CVM+PT
Sbjct: 90 KEH*CSPCVMNPT 52
>gb|CA024152.1|CA024152 HZ48I02r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ48I02
5-PRIME, mRNA sequence
Length = 463
Score = 198 bits (427), Expect = 5e-050
Identities = 80/108 (74%), Positives = 92/108 (85%)
Frame = +1 / +1
Query: 319 LLLLFCVGCRCRPSEIEATQTAALKVDASPQLARKIPETLFGIFFEEINHAGAGGIWAEL 498
LLL GC +E+E QTA L+VD S + ARKIP+TLFG+FFEEINHAGAGG+WAEL
Sbjct: 139 LLLSLSCGCLALAAELEGAQTALLQVDTSWKAARKIPQTLFGLFFEEINHAGAGGLWAEL 318
Query: 499 VSNRGFEAGGSHTPSNIDPWSIIGDDSSVFVATDRTSCFSRNIVALRM 642
VSN+GFEAGG HTPSNIDPWSIIGD+SS++V T+RTSCFSRNIVALRM
Sbjct: 319 VSNKGFEAGGPHTPSNIDPWSIIGDESSIYVKTERTSCFSRNIVALRM 462
Score = 144 bits (308), Expect = 1e-033
Identities = 68/110 (61%), Positives = 77/110 (70%)
Frame = -3 / -3
Query: 641 ILRATMFRLKHDVRSVATNTEESSPMMDHGSMFDGV*EPPASKPLLLTSSAHMPPAPAWL 462
ILRAT+F LK DV SV T E+SSPM+DHGSMF+GV* PPASKPLLLTSSAH PPAPAWL
Sbjct: 461 ILRATIFLLKQDVLSVFTYMEDSSPMIDHGSMFEGV*GPPASKPLLLTSSAHNPPAPAWL 282
Query: 461 ISSKNIPNSVSGIFRASCGEASTLRAAVWVASISEGRHLQPTQNRSRRQK 312
ISSKN P V GIF A+ + ST +AV S S P N R ++
Sbjct: 281 ISSKNKPKRV*GIFLAAFHDVSTCSSAV*APSSSAASARHPQLNERRSKE 132
>gb|CA028957.1|CA028957 HZ63L22r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ63L22
5-PRIME, mRNA sequence
Length = 390
Score = 197 bits (425), Expect = 9e-050
Identities = 82/105 (78%), Positives = 88/105 (83%)
Frame = +1 / +3
Query: 259 AYRKWKPMDLKQASSGTIFCLLLLFCVGCRCRPSEIEATQTAALKVDASPQLARKIPETL 438
A K K M KQ TI C+LLLFC GC+C SE++ATQTA LKVDAS QLARKIP+TL
Sbjct: 75 ALYKMKRMGSKQVFVPTIACVLLLFCFGCKCIASELQATQTATLKVDASSQLARKIPDTL 254
Query: 439 FGIFFEEINHAGAGGIWAELVSNRGFEAGGSHTPSNIDPWSIIGD 573
FG+FFEEINHAGAGGIWAELVSNRGFEAGG HTPSNIDPWSIIGD
Sbjct: 255 FGMFFEEINHAGAGGIWAELVSNRGFEAGGLHTPSNIDPWSIIGD 389
Score = 170 bits (365), Expect(2) = 3e-042
Identities = 74/102 (72%), Positives = 79/102 (77%)
Frame = -3 / -3
Query: 572 SPMMDHGSMFDGV*EPPASKPLLLTSSAHMPPAPAWLISSKNIPNSVSGIFRASCGEAST 393
SP++DHGS+FDGV PPASKPLLLTSSAHMPPAPAWLISSKNIPNSVSGIFRASC EAST
Sbjct: 388 SPIIDHGSIFDGVWSPPASKPLLLTSSAHMPPAPAWLISSKNIPNSVSGIFRASCDEAST 209
Query: 392 LRAAVWVASISEGRHLQPTQNRSRRQKIVPEEACLRSIGFHL 267
LR AV VA S+ HL P QNRS +V CL I F L
Sbjct: 208 LRVAVCVACNSDAMHLHPKQNRSSTHAMVGTNTCLEPIRFIL 83
Score = 140 bits (300), Expect = 2e-032
Identities = 58/102 (56%), Positives = 72/102 (70%)
Frame = +3 / +2
Query: 267 QVEAYGSQASLLWYNLLPSASILRGLQMSAFGNRGHPDSSPQG*CLATACPEDP*NTVWD 446
Q EAYG Q S+ Y+ + +A IL +QM + G D PQG*CL TACP+D +TVWD
Sbjct: 83 QDEAYGFQTSVRSYHRMRAAPILLWMQMHSIGITSDTDGHPQG*CLITACPKDTRHTVWD 262
Query: 447 IF*GDQPCRSWWHMGRACQ*QRFRSWRLSYSIKHRPVVHHWR 572
+F*GDQPCRS WHMGR C * RF SWR Y+IK+ P+V++WR
Sbjct: 263 VF*GDQPCRSRWHMGRTC***RF*SWRTPYAIKY*PMVYNWR 388
Score = 112 bits (239), Expect = 4e-024
Identities = 56/102 (54%), Positives = 67/102 (65%)
Frame = -2 / -2
Query: 573 ISNDGPRVDV*WSMRASSFETSVTDKLCPYATSSCMVDLLKKYPKQCFRDLPGKLWRGIN 394
++N P V++*W M +SSF+TS+T+K CPYAT SCMVDLLKK+PKQC L GKL GIN
Sbjct: 389 VANYRPWVNI*WRMESSSFKTSITNKFCPYATGSCMVDLLKKHPKQCVWYLSGKL**GIN 210
Query: 393 LEGCCLGGLYFRRPTSAAHAE*KQKAEDCTRGGLLEIHRLPL 268
LEG L L FR A+ AE*+Q A D L H L L
Sbjct: 209 LEGGRLCRL*FRCYAFASKAE*EQHACDGRNEHLFGTHTLHL 84
Score = 108 bits (230), Expect = 7e-023
Identities = 56/98 (57%), Positives = 63/98 (64%)
Frame = -1 / -1
Query: 559 TTGRCLMEYESLQLRNLCY*QALPICHQLLHG*SPQKISQTVFQGSSGQAVARHQP*GLL 380
T G+ LM Y LQL+NL Y*Q LPICH+LLHG*SPQK SQTV S GQAV RHQP*G
Sbjct: 375 TMGQYLMAYGVLQLQNLYY*QVLPICHRLLHG*SPQKTSQTVCLVSFGQAVMRHQP*GWP 196
Query: 379 SGWPLFPKADICSPRRIEAEGRRLYQRRLA*DP*ASTC 266
S + P IC RI A R +R L +P AS+C
Sbjct: 195 SVSLVIPMLCICIQSRIGAARMRW*ERTLVWNPYASSC 82
Score = 22.6 bits (43), Expect(2) = 3e-042
Identities = 7/13 (53%), Positives = 10/13 (76%)
Frame = -1 / -1
Query: 259 RRR*CNECVMHPT 221
+ *C+ CVM+PT
Sbjct: 81 KEH*CSPCVMNPT 43
>gb|AV836294.1|AV836294 AV836294 K. Sato unpublished cDNA library: Hordeum vulgare subsp.
vulgare seedling leaves second leaf stage Hordeum vulgare
subsp. vulgare cDNA clone basd3o13, mRNA sequence
Length = 549
Score = 195 bits (421), Expect = 3e-049
Identities = 70/98 (71%), Positives = 84/98 (85%)
Frame = +1 / +2
Query: 898 SRLQITTNKKGVVWLDQVSLMPEDTYKGHGFRTELISMLLDLKPRFLRFPGGCFVEGDWL 1077
SRLQ+TT K G+VW DQVSLMP DTY GHG+R +L SML +LKP+FL+FPGG +V G++L
Sbjct: 8 SRLQLTTTKSGIVWFDQVSLMPSDTYMGHGYRKDLASMLANLKPKFLKFPGGNYVMGNYL 187
Query: 1078 RNAFRWRESIGPWEERPGHFGDVWHYWTDDGLGYYEFL 1191
NAFRW E++GPWEERPGHF DVW YWTDDGLG++EFL
Sbjct: 188 LNAFRWSETVGPWEERPGHFNDVWGYWTDDGLGFFEFL 301
Score = 119 bits (255), Expect = 3e-026
Identities = 60/99 (60%), Positives = 68/99 (68%)
Frame = -3 / -1
Query: 1190 RNS*YPSPSSVQ*CQTSPKCPGLSSHGPIDSLHLNAFLSQSPSTKQPPGNLKNRGFKSKS 1011
RNS PSPSSVQ* QTS K PGLSS GP SL NAF P T PPGN KN GF+ S
Sbjct: 300 RNSKNPSPSSVQ*PQTSLK*PGLSSQGPTVSLQRNAFNR*FPMT*FPPGNFKNLGFRFAS 121
Query: 1010 MDISSVRKPCPLYVSSGMSDT*SSQTTPFLFVVI*SLDV 894
+D S+R PCP+ VS G+SDT*S+QT P VV *SL++
Sbjct: 120 IDARSLR*PCPM*VSDGISDT*SNQTMPLFVVVS*SLEL 4
>gb|CA024885.1|CA024885 HZ50J14r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ50J14
5-PRIME, mRNA sequence
Length = 417
Score = 172 bits (371), Expect = 3e-042
Identities = 69/97 (71%), Positives = 81/97 (83%)
Frame = +1 / +3
Query: 319 LLLLFCVGCRCRPSEIEATQTAALKVDASPQLARKIPETLFGIFFEEINHAGAGGIWAEL 498
LLL GC +E+E QTA L+VD S + ARKIP+TLFG+FFEEINHAGAGG+WAEL
Sbjct: 126 LLLSLSCGCLALAAELEGAQTALLQVDTSWKAARKIPQTLFGLFFEEINHAGAGGLWAEL 305
Query: 499 VSNRGFEAGGSHTPSNIDPWSIIGDDSSVFVATDRTS 609
VSN+GFEAGG HTPSNIDPWSIIGD+SS++V T+RTS
Sbjct: 306 VSNKGFEAGGPHTPSNIDPWSIIGDESSIYVKTERTS 416
Score = 127 bits (272), Expect = 1e-028
Identities = 60/99 (60%), Positives = 68/99 (68%)
Frame = -3 / -3
Query: 608 DVRSVATNTEESSPMMDHGSMFDGV*EPPASKPLLLTSSAHMPPAPAWLISSKNIPNSVS 429
DV SV T E+SSPM+DHGSMF+GV* PPASKPLLLTSSAH PPAPAWLISSKN P V
Sbjct: 415 DVLSVFTYMEDSSPMIDHGSMFEGV*GPPASKPLLLTSSAHNPPAPAWLISSKNKPKRV* 236
Query: 428 GIFRASCGEASTLRAAVWVASISEGRHLQPTQNRSRRQK 312
GIF A+ + ST +AV S S P N R ++
Sbjct: 235 GIFLAAFHDVSTCSSAV*APSSSAASARHPQLNERRSKE 119
>gb|CA026435.1|CA026435 HZ55O15r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ55O15
5-PRIME, mRNA sequence
Length = 438
Score = 172 bits (371), Expect = 3e-042
Identities = 69/97 (71%), Positives = 81/97 (83%)
Frame = +1 / +2
Query: 319 LLLLFCVGCRCRPSEIEATQTAALKVDASPQLARKIPETLFGIFFEEINHAGAGGIWAEL 498
LLL GC +E+E QTA L+VD S + ARKIP+TLFG+FFEEINHAGAGG+WAEL
Sbjct: 146 LLLSLSCGCLALAAELEGAQTALLQVDTSWKAARKIPQTLFGLFFEEINHAGAGGLWAEL 325
Query: 499 VSNRGFEAGGSHTPSNIDPWSIIGDDSSVFVATDRTS 609
VSN+GFEAGG HTPSNIDPWSIIGD+SS++V T+RTS
Sbjct: 326 VSNKGFEAGGPHTPSNIDPWSIIGDESSIYVKTERTS 436
Score = 127 bits (272), Expect = 1e-028
Identities = 60/99 (60%), Positives = 68/99 (68%)
Frame = -3 / -1
Query: 608 DVRSVATNTEESSPMMDHGSMFDGV*EPPASKPLLLTSSAHMPPAPAWLISSKNIPNSVS 429
DV SV T E+SSPM+DHGSMF+GV* PPASKPLLLTSSAH PPAPAWLISSKN P V
Sbjct: 435 DVLSVFTYMEDSSPMIDHGSMFEGV*GPPASKPLLLTSSAHNPPAPAWLISSKNKPKRV* 256
Query: 428 GIFRASCGEASTLRAAVWVASISEGRHLQPTQNRSRRQK 312
GIF A+ + ST +AV S S P N R ++
Sbjct: 255 GIFLAAFHDVSTCSSAV*APSSSAASARHPQLNERRSKE 139
>gb|BI952689.1|BI952689 HVSMEm0007G12f Hordeum vulgare green seedling EST library
HVcDNA0014 (Blumeria infected) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEm0007G12f, mRNA sequence
Length = 417
Score = 168 bits (362), Expect = 4e-041
Identities = 67/96 (69%), Positives = 79/96 (82%)
Frame = +1 / +3
Query: 319 LLLLFCVGCRCRPSEIEATQTAALKVDASPQLARKIPETLFGIFFEEINHAGAGGIWAEL 498
LLL GC +E+E TA L+VD S + ARKIP+TLFG+FFEEINHAGAGG+WAEL
Sbjct: 129 LLLSLSCGCLALAAELEGAHTALLQVDTSWKAARKIPQTLFGLFFEEINHAGAGGLWAEL 308
Query: 499 VSNRGFEAGGSHTPSNIDPWSIIGDDSSVFVATDRT 606
VSN+GFEAGG HTPSNIDPWSIIGD+SS++V T+RT
Sbjct: 309 VSNKGFEAGGPHTPSNIDPWSIIGDESSIYVKTERT 416
Score = 124 bits (266), Expect = 8e-028
Identities = 59/98 (60%), Positives = 67/98 (68%)
Frame = -3 / -3
Query: 605 VRSVATNTEESSPMMDHGSMFDGV*EPPASKPLLLTSSAHMPPAPAWLISSKNIPNSVSG 426
V SV T E+SSPM+DHGSMF+GV* PPASKPLLLTSSAH PPAPAWLISSKN P V G
Sbjct: 415 VLSVFTYMEDSSPMIDHGSMFEGV*GPPASKPLLLTSSAHNPPAPAWLISSKNKPKRV*G 236
Query: 425 IFRASCGEASTLRAAVWVASISEGRHLQPTQNRSRRQK 312
IF A+ + ST +AV S S P N R ++
Sbjct: 235 IFLAAFHDVSTCSSAV*APSSSAASARHPQLNERRSKE 122
>gb|CA020538.1|CA020538 HZ36J20r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ36J20
5-PRIME, mRNA sequence
Length = 416
Score = 168 bits (362), Expect = 4e-041
Identities = 67/95 (70%), Positives = 79/95 (83%)
Frame = +1 / +1
Query: 319 LLLLFCVGCRCRPSEIEATQTAALKVDASPQLARKIPETLFGIFFEEINHAGAGGIWAEL 498
LLL GC +E+E QTA L+VD S + ARKIP+TLFG+FFEEINHAGAGG+WAEL
Sbjct: 130 LLLSLSCGCLALAAELEGAQTALLQVDTSWKAARKIPQTLFGLFFEEINHAGAGGLWAEL 309
Query: 499 VSNRGFEAGGSHTPSNIDPWSIIGDDSSVFVATDR 603
VSN+GFEAGG HTPSNIDPWSIIGD+SS++V T+R
Sbjct: 310 VSNKGFEAGGPHTPSNIDPWSIIGDESSIYVKTER 414
Score = 124 bits (266), Expect = 8e-028
Identities = 59/98 (60%), Positives = 67/98 (68%)
Frame = -3 / -1
Query: 605 VRSVATNTEESSPMMDHGSMFDGV*EPPASKPLLLTSSAHMPPAPAWLISSKNIPNSVSG 426
V SV T E+SSPM+DHGSMF+GV* PPASKPLLLTSSAH PPAPAWLISSKN P V G
Sbjct: 416 VLSVFTYMEDSSPMIDHGSMFEGV*GPPASKPLLLTSSAHNPPAPAWLISSKNKPKRV*G 237
Query: 425 IFRASCGEASTLRAAVWVASISEGRHLQPTQNRSRRQK 312
IF A+ + ST +AV S S P N R ++
Sbjct: 236 IFLAAFHDVSTCSSAV*APSSSAASARHPQLNERRSKE 123
>gb|CA024147.1|CA024147 HZ48H21r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ48H21
5-PRIME, mRNA sequence
Length = 428
Score = 165 bits (355), Expect = 4e-040
Identities = 66/93 (70%), Positives = 77/93 (82%)
Frame = +1 / +2
Query: 319 LLLLFCVGCRCRPSEIEATQTAALKVDASPQLARKIPETLFGIFFEEINHAGAGGIWAEL 498
LLL GC +E+E QTA L+VD S + ARKIP+TLFG+FFEEINHAGAGG+WAEL
Sbjct: 149 LLLSLSCGCLALAAELEGAQTALLQVDTSWKAARKIPQTLFGLFFEEINHAGAGGLWAEL 328
Query: 499 VSNRGFEAGGSHTPSNIDPWSIIGDDSSVFVAT 597
VSN+GFEAGG HTPSNIDPWSIIGD+SS++V T
Sbjct: 329 VSNKGFEAGGPHTPSNIDPWSIIGDESSIYVKT 427
Score = 122 bits (260), Expect = 5e-027
Identities = 57/95 (60%), Positives = 65/95 (68%)
Frame = -3 / -3
Query: 596 VATNTEESSPMMDHGSMFDGV*EPPASKPLLLTSSAHMPPAPAWLISSKNIPNSVSGIFR 417
V T E+SSPM+DHGSMF+GV* PPASKPLLLTSSAH PPAPAWLISSKN P V GIF
Sbjct: 426 VFTYMEDSSPMIDHGSMFEGV*GPPASKPLLLTSSAHNPPAPAWLISSKNKPKRV*GIFL 247
Query: 416 ASCGEASTLRAAVWVASISEGRHLQPTQNRSRRQK 312
A+ + ST +AV S S P N R ++
Sbjct: 246 AAFHDVSTCSSAV*APSSSAASARHPQLNERRSKE 142
>gb|BM100077.2|BM100077 EBma01_SQ001_B24_R maternal, 4 DPA, no treatment, cv Optic, EBma01
Hordeum vulgare subsp. vulgare cDNA clone
EBma01_SQ001_B24 5', mRNA sequence
Length = 223
Score = 165 bits (354), Expect = 6e-040
Identities = 60/73 (82%), Positives = 71/73 (97%)
Frame = +1 / +3
Query: 538 PSNIDPWSIIGDDSSVFVATDRTSCFSRNIVALRMEVLCDECPAGGVGVYNPGFWGMNIE 717
PSNIDPWSIIGD+SS++V T+RTSCFSRNIVALRME+LC +CPAGGVG+YNPGFWGMNIE
Sbjct: 3 PSNIDPWSIIGDESSIYVKTERTSCFSRNIVALRMEILCAKCPAGGVGIYNPGFWGMNIE 182
Query: 718 DGKAYNLVMYVQS 756
+GK+YNLVMY++S
Sbjct: 183 EGKSYNLVMYIRS 221
Score = 127 bits (271), Expect = 2e-028
Identities = 55/73 (75%), Positives = 60/73 (82%)
Frame = -3 / -1
Query: 755 D*TYITRL*AFPSSMFMPQKPGL*TPTPPAGHSSQRTSILRATMFRLKHDVRSVATNTEE 576
D YITRL* FPSSMFMPQ PGL* PTPPAGH +QR SILRAT+F LK DV SV T E+
Sbjct: 220 DLIYITRL*LFPSSMFMPQNPGL*IPTPPAGHLAQRISILRATIFLLKQDVLSVFTYMED 41
Query: 575 SSPMMDHGSMFDG 537
SSPM+DHGSMF+G
Sbjct: 40 SSPMIDHGSMFEG 2
Score = 108 bits (230), Expect = 7e-023
Identities = 40/70 (57%), Positives = 55/70 (78%)
Frame = -2 / -3
Query: 750 NIHNEIVGLPIFYVHAPKTWVINTNTTSWTLITEDLHPQSNNVSTET*CTISRHKHGGVI 571
+IH +I+ LP FYVHAP++WV+NTNT SWTL T++ HP SN++STET C+ S H +GG +
Sbjct: 215 DIHYQIIALPFFYVHAPESWVVNTNTASWTLGTKNFHP*SNDISTETRCSFSLHVYGGFV 36
Query: 570 SNDGPRVDV* 541
+ND P + V*
Sbjct: 35 TNDRPWIYV* 6
>gb|BU975293.1|BU975293 HB30L10r BC Hordeum vulgare subsp. vulgare cDNA clone HB30L10
5-PRIME, mRNA sequence
Length = 245
Score = 153 bits (329), Expect = 2e-036
Identities = 54/78 (69%), Positives = 64/78 (82%)
Frame = +1 / +3
Query: 934 VWLDQVSLMPEDTYKGHGFRTELISMLLDLKPRFLRFPGGCFVEGDWLRNAFRWRESIGP 1113
VWLDQVS+MP DTY GHGFR +L SML +LKP+FL+FPGG + G++LRNAF W E++GP
Sbjct: 12 VWLDQVSVMPSDTYMGHGFRKDLASMLANLKPQFLKFPGGNYAMGNYLRNAFHWGETVGP 191
Query: 1114 WEERPGHFGDVWHYWTDD 1167
WEERPGH D W YWTDD
Sbjct: 192 WEERPGHVNDAWGYWTDD 245
>gb|BU990075.1|BU990075 HF23P24r HF Hordeum vulgare subsp. vulgare cDNA clone HF23P24
5-PRIME, mRNA sequence
Length = 646
Score = 152 bits (327), Expect = 3e-036
Identities = 53/75 (70%), Positives = 65/75 (86%)
Frame = +1 / +1
Query: 967 DTYKGHGFRTELISMLLDLKPRFLRFPGGCFVEGDWLRNAFRWRESIGPWEERPGHFGDV 1146
DTY GHG+R +L SML +LKP+FL+FPGG +V G++L NAFRW E++GPWEERPGHF DV
Sbjct: 1 DTYMGHGYRKDLASMLANLKPKFLKFPGGNYVMGNYLLNAFRWSETVGPWEERPGHFNDV 180
Query: 1147 WHYWTDDGLGYYEFL 1191
W YWTDDGLG++EFL
Sbjct: 181 WGYWTDDGLGFFEFL 225
>gb|CB883684.1|CB883684 HQ02P16w HQ Hordeum vulgare subsp. vulgare cDNA clone HQ02P16
3-PRIME, mRNA sequence
Length = 601
Score = 132 bits (282), Expect = 5e-030
Identities = 53/67 (79%), Positives = 57/67 (85%)
Frame = +1 / +3
Query: 307 TIFCLLLLFCVGCRCRPSEIEATQTAALKVDASPQLARKIPETLFGIFFEEINHAGAGGI 486
TI C LLLFCV C+C SE E TQ A+L VD+SP LARKIP+TLFGIFFEEINHAGAGGI
Sbjct: 399 TILCFLLLFCVSCKCLASEFEITQVASLGVDSSPHLARKIPDTLFGIFFEEINHAGAGGI 578
Query: 487 WAELVSN 507
WAELVSN
Sbjct: 579 WAELVSN 599
Score = 124 bits (266), Expect = 8e-028
Identities = 52/68 (76%), Positives = 58/68 (85%)
Frame = -3 / -1
Query: 509 LLLTSSAHMPPAPAWLISSKNIPNSVSGIFRASCGEASTLRAAVWVASISEGRHLQPTQN 330
LLLTSSAH+PPAPAWLISSKNIPNSVSGIFRA CGE ST R A WV S S+ +HLQ TQ
Sbjct: 601 LLLTSSAHIPPAPAWLISSKNIPNSVSGIFRARCGEESTPRLATWVISNSDAKHLQLTQK 422
Query: 329 RSRRQKIV 306
RS++Q+IV
Sbjct: 421 RSKKQRIV 398
>gb|AL508926.1|AL508926 AL508926 Hordeum vulgare Barke developing caryopsis (3.-15.DAP)
Hordeum vulgare subsp. vulgare cDNA clone HY10D08V 5',
mRNA sequence
Length = 700
Score = 121 bits (259), Expect = 7e-027
Identities = 42/50 (84%), Positives = 46/50 (92%)
Frame = +1 / +1
Query: 1042 FPGGCFVEGDWLRNAFRWRESIGPWEERPGHFGDVWHYWTDDGLGYYEFL 1191
FPGG FVEG+ LRNAFRW E+IGPWEERPGH+GDVW+YWTDDGLGYYE L
Sbjct: 10 FPGGTFVEGNLLRNAFRWXETIGPWEERPGHYGDVWNYWTDDGLGYYELL 159
>gb|AV923522.1|AV923522 AV923522 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp.
vulgare cDNA clone basd13h16 5', mRNA sequence
Length = 270
Score = 118 bits (253), Expect = 5e-026
Identities = 51/73 (69%), Positives = 57/73 (78%)
Frame = +1 / +3
Query: 259 AYRKWKPMDLKQASSGTIFCLLLLFCVGCRCRPSEIEATQTAALKVDASPQLARKIPETL 438
A K K M KQ TI C+LLLFC GC+C SE++ATQTA LKVDAS QLARKIP+TL
Sbjct: 51 ALYKMKRMGSKQVFVPTIACVLLLFCFGCKCIASELQATQTATLKVDASSQLARKIPDTL 230
Query: 439 FGIFFEEINHAGA 477
FG+FFEEINHAGA
Sbjct: 231 FGMFFEEINHAGA 269
Score = 103 bits (219), Expect(2) = 3e-022
Identities = 47/70 (67%), Positives = 49/70 (70%)
Frame = -3 / -3
Query: 476 APAWLISSKNIPNSVSGIFRASCGEASTLRAAVWVASISEGRHLQPTQNRSRRQKIVPEE 297
APAWLISSKNIPNSVSGIFRASC EASTLR AV VA S+ HL P QNRS +V
Sbjct: 268 APAWLISSKNIPNSVSGIFRASCDEASTLRVAVCVACNSDAMHLHPKQNRSSTHAMVGTN 89
Query: 296 ACLRSIGFHL 267
CL I F L
Sbjct: 88 TCLEPIRFIL 59
Score = 22.6 bits (43), Expect(2) = 3e-022
Identities = 7/13 (53%), Positives = 10/13 (76%)
Frame = -1 / -1
Query: 259 RRR*CNECVMHPT 221
+ *C+ CVM+PT
Sbjct: 57 KEH*CSPCVMNPT 19
>gb|CA014049.1|CA014049 HT10D23r HT Hordeum vulgare subsp. vulgare cDNA clone HT10D23
5-PRIME, mRNA sequence
Length = 660
Score = 104 bits (222), Expect = 9e-022
Identities = 35/48 (72%), Positives = 42/48 (87%)
Frame = +1 / +1
Query: 1048 GGCFVEGDWLRNAFRWRESIGPWEERPGHFGDVWHYWTDDGLGYYEFL 1191
GG +V G++L NAFRW E++GPWEERPGHF DVW YWTDDGLG++EFL
Sbjct: 172 GGNYVMGNYLLNAFRWSETVGPWEERPGHFNDVWGYWTDDGLGFFEFL 315
Database: Hordeum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:16 PM
Number of letters in database: 175,134,539
Number of sequences in database: 312,970
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 639,154,340
Number of Sequences: 312970
Number of extensions: 11559965
Number of successful extensions: 80559
Number of sequences better than 1.0e-020: 35
length of database: 58,378,179
effective HSP length: 53
effective length of database: 41,790,769
effective search space used: 14334233767
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)