TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2161238.2.2
(1186 letters)
Database: Hordeum_nucl_with_EST.fasta
312,970 sequences; 175,134,539 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BF260800.3|BF260800 HVSMEf0022P16f Hordeum vulgare seedl... 160 6e-088
gb|BF263615.1|BF263615 HV_CEa0007D10f Hordeum vulgare seedl... 200 4e-072
gb|BF631681.2|BF631681 HVSMEb0016O17f Hordeum vulgare seedl... 115 2e-070
gb|CA031549.1|CA031549 HX10F18r HX Hordeum vulgare subsp. v... 138 2e-070
gb|BJ458220.1|BJ458220 BJ458220 K. Sato unpublished cDNA li... 167 4e-067
gb|BQ768685.1|BQ768685 EBro08_SQ012_K12_R root, 3 week, dro... 115 2e-063
gb|BE559148.1|BE559148 HV_CEb0023K15f Hordeum vulgare seedl... 149 7e-062
gb|AV931601.1|AV931601 AV931601 K. Sato unpublished cDNA li... 167 1e-059
gb|BF265478.2|BF265478 HV_CEa0012G06f Hordeum vulgare seedl... 193 2e-059
gb|AV926700.1|AV926700 AV926700 K. Sato unpublished cDNA li... 115 2e-058
gb|BE216036.2|BE216036 HV_CEb0009D03f Hordeum vulgare seedl... 144 4e-055
gb|BJ458244.1|BJ458244 BJ458244 K. Sato unpublished cDNA li... 167 8e-055
gb|U02287.1|HVU02287 Hordeum vulgare cultivar NK1558 chitin... 110 8e-054
gb|BJ447651.1|BJ447651 BJ447651 K. Sato unpublished cDNA li... 207 1e-052
gb|BJ455403.1|BJ455403 BJ455403 K. Sato unpublished cDNA li... 207 1e-052
gb|BQ768408.1|BQ768408 EBro08_SQ011_K13_R root, 3 week, dro... 160 5e-051
gb|BE216122.2|BE216122 HV_CEb0009I06f Hordeum vulgare seedl... 92 2e-050
gb|BE216371.2|BE216371 HV_CEb0010F03f Hordeum vulgare seedl... 92 5e-050
gb|BF626132.3|BF626132 HVSMEa0015P16f Hordeum vulgare seedl... 105 1e-049
gb|BG365536.1|BG365536 HVSMEi0003B22f Hordeum vulgare 20 DA... 116 4e-049
gb|BQ755807.1|BQ755807 EBed07_SQ003_N15_R endosperm, 28 DPA... 116 5e-047
gb|BF623642.2|BF623642 HVSMEa0003E14f Hordeum vulgare seedl... 115 2e-046
gb|BF064981.3|BF064981 HV_CEb0022E17f Hordeum vulgare seedl... 109 4e-045
gb|BE213990.1|BE213990 HV_CEb0001N13f Hordeum vulgare seedl... 92 7e-045
gb|CB876220.1|CB876220 HX10K07w HX Hordeum vulgare subsp. v... 135 8e-045
gb|BG365857.2|BG365857 HVSMEi0004I09f Hordeum vulgare 20 DA... 110 9e-045
gb|BM369392.2|BM369392 EBem07_SQ003_H07_R embryo, 28 DPA, n... 112 1e-044
gb|BE558718.1|BE558718 HV_CEb0020C16f Hordeum vulgare seedl... 89 6e-044
gb|BG300488.1|BG300488 HVSMEb0017D20f Hordeum vulgare seedl... 94 1e-043
gb|BM368400.2|BM368400 EBem08_SQ002_B18_R embryo, 40 DPA, n... 102 2e-042
gb|BG365887.1|BG365887 HVSMEi0004K07f Hordeum vulgare 20 DA... 104 3e-042
gb|BG365634.2|BG365634 HVSMEi0003I02f Hordeum vulgare 20 DA... 116 7e-042
gb|BG415203.1|BG415203 HVSMEk0005I16f Hordeum vulgare testa... 116 1e-041
gb|BF627814.2|BF627814 HVSMEb0005N23f Hordeum vulgare seedl... 92 5e-041
gb|BE454366.3|BE454366 HVSMEh0093N17f Hordeum vulgare 5-45 ... 111 2e-040
gb|BQ465942.1|BQ465942 HT01C02T HT Hordeum vulgare subsp. v... 116 1e-039
gb|BG369588.2|BG369588 HVSMEi0025B12f Hordeum vulgare 20 DA... 116 4e-039
gb|BG414551.2|BG414551 HVSMEk0002N14f Hordeum vulgare testa... 116 5e-039
gb|BG366386.2|BG366386 HVSMEi0006N24f Hordeum vulgare 20 DA... 116 5e-039
gb|BG416746.1|BG416746 HVSMEk0014F08f Hordeum vulgare testa... 116 5e-039
gb|CA014196.1|CA014196 HT10K16r HT Hordeum vulgare subsp. v... 116 9e-039
gb|BM441867.2|BM441867 EBed07_SQ001_M10_R endosperm, 28 DPA... 116 9e-039
gb|BM371924.2|BM371924 EBma08_SQ004_G15_R maternal, 28 DPA,... 116 9e-039
gb|BI780034.2|BI780034 EBma08_SQ001_D14_R maternal, 28 DPA,... 116 2e-038
gb|CA013166.1|CA013166 HT07J12r HT Hordeum vulgare subsp. v... 110 2e-038
gb|BQ466541.1|BQ466541 HT02N08r HT Hordeum vulgare subsp. v... 116 2e-038
gb|AL499683.1|AL499683 AL499683 Hordeum vulgare Barke etiol... 91 2e-038
gb|BE455238.3|BE455238 HVSMEh0096L08f Hordeum vulgare 5-45 ... 112 4e-038
gb|BE454492.3|BE454492 HVSMEh0094A02f Hordeum vulgare 5-45 ... 116 6e-038
gb|BI780179.2|BI780179 EBma08_SQ001_K01_R maternal, 28 DPA,... 113 6e-038
gb|BE602548.3|BE602548 HVSMEh0099N16f Hordeum vulgare 5-45 ... 116 8e-038
gb|CB876675.1|CB876675 HP02A05T HP Hordeum vulgare subsp. v... 119 1e-037
gb|BG368852.1|BG368852 HVSMEi0020P03f Hordeum vulgare 20 DA... 110 1e-037
gb|BI949464.1|BI949464 HVSMEl0014A17f Hordeum vulgare spike... 110 2e-037
gb|BG414755.1|BG414755 HVSMEk0003J19f Hordeum vulgare testa... 116 3e-037
gb|BQ765750.1|BQ765750 EBro03_SQ008_F04_R root, 3 week, wat... 92 4e-037
gb|BG365326.1|BG365326 HVSMEi0002E22f Hordeum vulgare 20 DA... 109 4e-037
gb|CA022080.1|CA022080 HZ42B20r HZ Hordeum vulgare subsp. v... 109 4e-037
gb|BG367616.2|BG367616 HVSMEi0012P08f Hordeum vulgare 20 DA... 83 7e-037
gb|BE454845.1|BE454845 HVSMEh0095E05f Hordeum vulgare 5-45 ... 110 9e-037
gb|BE216858.2|BE216858 HV_CEb0011N12f Hordeum vulgare seedl... 90 1e-036
emb|AJ276226.1|HVU276226 Hordeum vulgare mRNA for chitinase... 76 1e-036
gb|BE602137.3|BE602137 HVSMEh0102K15f Hordeum vulgare 5-45 ... 105 1e-036
gb|BI949025.1|BI949025 HVSMEl0012B07f Hordeum vulgare spike... 113 2e-036
emb|X78671.1|HVCHT2A H.vulgare mRNA for chitinase 2a 76 2e-036
gb|BI946904.1|BI946904 HVSMEl0002L21f Hordeum vulgare spike... 115 2e-036
emb|X78672.1|HVCHT2B H.vulgare mRNA for chitinase 2b 74 2e-036
gb|AL500402.1|AL500402 AL500402 Hordeum vulgare Barke etiol... 78 4e-036
gb|CA012187.1|CA012187 HT04K16r HT Hordeum vulgare subsp. v... 116 4e-036
gb|BG368854.1|BG368854 HVSMEi0020P07f Hordeum vulgare 20 DA... 107 6e-036
gb|BQ466147.1|BQ466147 HT01L11T HT Hordeum vulgare subsp. v... 110 2e-035
gb|CA013604.1|CA013604 HT08P16r HT Hordeum vulgare subsp. v... 110 2e-035
gb|BQ465191.1|BQ465191 HU02O12r HU Hordeum vulgare subsp. v... 110 2e-035
emb|X15349.1|HVENDCHT Barley (H.vulgare) mRNA for endochiti... 110 2e-035
gb|BG417971.1|BG417971 HVSMEk0020F20f Hordeum vulgare testa... 110 2e-035
gb|BE559172.3|BE559172 HV_CEb0023M17f Hordeum vulgare seedl... 97 4e-035
gb|BG417744.1|BG417744 HVSMEk0019F09f Hordeum vulgare testa... 111 7e-035
gb|BG301220.2|BG301220 HVSMEb0019P18f Hordeum vulgare seedl... 112 1e-034
gb|BJ546657.1|BJ546657 BJ546657 K. Sato unpublished cDNA li... 76 2e-034
gb|BJ544954.1|BJ544954 BJ544954 K. Sato unpublished cDNA li... 76 2e-034
gb|BG367460.1|BG367460 HVSMEi0012F13f Hordeum vulgare 20 DA... 71 6e-034
gb|CA012210.1|CA012210 HT04M11r HT Hordeum vulgare subsp. v... 110 6e-034
gb|AV926193.1|AV926193 AV926193 K. Sato unpublished cDNA li... 109 7e-034
gb|AV926184.1|AV926184 AV926184 K. Sato unpublished cDNA li... 109 7e-034
gb|BG366294.2|BG366294 HVSMEi0006J18f Hordeum vulgare 20 DA... 85 2e-033
gb|BG369358.2|BG369358 HVSMEi0024B14f Hordeum vulgare 20 DA... 116 2e-033
gb|BG365157.2|BG365157 HVSMEi0001I15f Hordeum vulgare 20 DA... 106 4e-033
gb|BE195290.2|BE195290 HVSMEh0088N04f Hordeum vulgare 5-45 ... 100 4e-033
gb|CB879149.1|CB879149 HP11B19T HP Hordeum vulgare subsp. v... 75 6e-033
gb|BF065067.1|BF065067 HV_CEb0022N01f Hordeum vulgare seedl... 76 1e-032
gb|BM096890.2|BM096890 EBma08_SQ001_O17_R maternal, 28 DPA,... 100 2e-032
gb|BG365987.1|BG365987 HVSMEi0005K09f Hordeum vulgare 20 DA... 96 2e-032
gb|BQ663496.1|BQ663496 HU02O12u HU Hordeum vulgare subsp. v... 100 2e-032
gb|CA016825.1|CA016825 HV05P04u HV Hordeum vulgare subsp. v... 100 2e-032
gb|BJ544774.1|BJ544774 BJ544774 K. Sato unpublished cDNA li... 76 3e-032
gb|BF264498.2|BF264498 HV_CEa0009J09f Hordeum vulgare seedl... 76 8e-032
gb|BM371442.2|BM371442 EBma08_SQ002_M02_R maternal, 28 DPA,... 97 1e-031
gb|CA014966.1|CA014966 HT12N24r HT Hordeum vulgare subsp. v... 91 2e-031
gb|BF064990.1|BF064990 HV_CEb0022F13f Hordeum vulgare seedl... 76 3e-031
gb|BF065825.3|BF065825 HV_CEb0014B14f Hordeum vulgare seedl... 76 8e-031
gb|BM371530.2|BM371530 EBma08_SQ003_B11_R maternal, 28 DPA,... 89 8e-031
gb|BJ546437.1|BJ546437 BJ546437 K. Sato unpublished cDNA li... 76 1e-030
gb|BE214283.1|BE214283 HV_CEb0003A01f Hordeum vulgare seedl... 76 2e-030
gb|BI955596.1|BI955596 HVSMEm0023L14f Hordeum vulgare green... 77 3e-030
gb|BM369786.2|BM369786 EBem07_SQ004_J18_R embryo, 28 DPA, n... 91 4e-030
gb|AV931065.1|AV931065 AV931065 K. Sato unpublished cDNA li... 96 8e-030
gb|BE519687.3|BE519687 HV_CEb0018G12f Hordeum vulgare seedl... 95 8e-030
gb|BM097408.2|BM097408 EBem07_SQ001_P19_R embryo, 28 DPA, n... 91 2e-029
gb|CA018162.1|CA018162 HV07L16r HV Hordeum vulgare subsp. v... 110 2e-029
gb|BE602672.2|BE602672 HVSMEh0101A21f Hordeum vulgare 5-45 ... 71 3e-029
gb|BI948372.1|BI948372 HVSMEl0009E13f Hordeum vulgare spike... 85 1e-028
gb|BF622695.2|BF622695 HVSMEa0007O13f Hordeum vulgare seedl... 87 1e-028
gb|BJ545180.1|BJ545180 BJ545180 K. Sato unpublished cDNA li... 76 2e-028
gb|BG365415.2|BG365415 HVSMEi0002J15f Hordeum vulgare 20 DA... 59 3e-028
gb|BG368439.1|BG368439 HVSMEi0018M10f Hordeum vulgare 20 DA... 84 4e-028
gb|CA015187.1|CA015187 HT13I21r HT Hordeum vulgare subsp. v... 79 7e-028
gb|CA017694.1|CA017694 HV05P04r HV Hordeum vulgare subsp. v... 105 9e-028
gb|BE214577.2|BE214577 HV_CEb0003N19f Hordeum vulgare seedl... 73 1e-027
gb|BG368640.2|BG368640 HVSMEi0020A24f Hordeum vulgare 20 DA... 77 2e-027
gb|BI949350.1|BI949350 HVSMEl0013H11f Hordeum vulgare spike... 58 3e-027
gb|BE214536.1|BE214536 HV_CEb0003L19f Hordeum vulgare seedl... 73 8e-027
gb|BF259800.2|BF259800 HVSMEf0020E19f Hordeum vulgare seedl... 113 8e-027
gb|CB879385.1|CB879385 HP02A05w HP Hordeum vulgare subsp. v... 85 8e-027
gb|BQ758640.1|BQ758640 EBma07_SQ002_J07_R maternal, 21 DPA,... 69 2e-026
gb|BE411224.1|BE411224 ISC003.D02F990524 ITEC ISC Barley Le... 110 3e-026
gb|BJ543978.1|BJ543978 BJ543978 K. Sato unpublished cDNA li... 76 5e-026
gb|BJ448252.1|BJ448252 BJ448252 K. Sato unpublished cDNA li... 118 7e-026
gb|BJ455971.1|BJ455971 BJ455971 K. Sato unpublished cDNA li... 118 7e-026
gb|BF065694.2|BF065694 HV_CEb0013H08f Hordeum vulgare seedl... 78 7e-026
gb|CB878161.1|CB878161 HP07J01T HP Hordeum vulgare subsp. v... 76 7e-026
gb|BJ544278.1|BJ544278 BJ544278 K. Sato unpublished cDNA li... 76 7e-026
gb|BJ544690.1|BJ544690 BJ544690 K. Sato unpublished cDNA li... 76 7e-026
gb|BI780166.2|BI780166 EBma08_SQ001_J11_R maternal, 28 DPA,... 76 2e-025
gb|BE216024.1|BE216024 HV_CEb0009C12f Hordeum vulgare seedl... 76 2e-025
gb|BI951414.1|BI951414 HVSMEl0025N19f Hordeum vulgare spike... 76 2e-025
gb|BF066058.1|BF066058 HV_CEb0014L16f Hordeum vulgare seedl... 76 3e-025
gb|BM444091.1|BM444091 EBem09_SQ004_C05_R embryo, 1 Day ger... 74 3e-025
gb|BM444155.1|BM444155 EBem09_SQ004_F06_R embryo, 1 Day ger... 74 3e-025
gb|BM444185.1|BM444185 EBem09_SQ004_G13_R embryo, 1 Day ger... 74 3e-025
gb|CA026694.1|CA026694 HZ56K16r HZ Hordeum vulgare subsp. v... 89 3e-025
gb|BM371550.2|BM371550 EBma08_SQ003_C16_R maternal, 28 DPA,... 116 3e-025
gb|BG368219.2|BG368219 HVSMEi0016L15f Hordeum vulgare 20 DA... 71 5e-025
gb|BE195244.3|BE195244 HVSMEh0088K24f Hordeum vulgare 5-45 ... 115 6e-025
gb|BI953201.1|BI953201 HVSMEm0011K01f Hordeum vulgare green... 73 7e-025
gb|BJ449472.1|BJ449472 BJ449472 K. Sato unpublished cDNA li... 72 7e-025
gb|BJ459432.1|BJ459432 BJ459432 K. Sato unpublished cDNA li... 72 7e-025
gb|BG365564.2|BG365564 HVSMEi0003D14f Hordeum vulgare 20 DA... 72 9e-025
gb|AJ461109.1|AJ461109 AJ461109 S00002 Hordeum vulgare subs... 72 2e-024
gb|AJ461110.1|AJ461110 AJ461110 S00002 Hordeum vulgare subs... 72 2e-024
gb|BG366444.1|BG366444 HVSMEi0007B06f Hordeum vulgare 20 DA... 65 4e-024
gb|BI952125.1|BI952125 HVSMEm0004L07f Hordeum vulgare green... 76 6e-024
gb|BE214483.2|BE214483 HV_CEb0003J11f Hordeum vulgare seedl... 76 6e-024
gb|AV911582.1|AV911582 AV911582 K. Sato unpublished cDNA li... 76 6e-024
gb|BJ464879.1|BJ464879 BJ464879 K. Sato unpublished cDNA li... 96 6e-024
gb|BU986660.1|BU986660 HF12I18r HF Hordeum vulgare subsp. v... 96 6e-024
gb|BJ544721.1|BJ544721 BJ544721 K. Sato unpublished cDNA li... 76 6e-024
gb|BJ456780.1|BJ456780 BJ456780 K. Sato unpublished cDNA li... 76 6e-024
gb|BU986619.1|BU986619 HF12G18r HF Hordeum vulgare subsp. v... 96 6e-024
gb|AV908961.1|AV908961 AV908961 K. Sato unpublished cDNA li... 76 6e-024
gb|AV928645.1|AV928645 AV928645 K. Sato unpublished cDNA li... 76 6e-024
gb|BJ546197.1|BJ546197 BJ546197 K. Sato unpublished cDNA li... 76 6e-024
gb|BJ449314.1|BJ449314 BJ449314 K. Sato unpublished cDNA li... 76 6e-024
gb|BJ546165.1|BJ546165 BJ546165 K. Sato unpublished cDNA li... 76 6e-024
gb|BI955638.1|BI955638 HVSMEm0023N21f Hordeum vulgare green... 73 8e-024
gb|BE196066.3|BE196066 HVSMEh0091E09f Hordeum vulgare 5-45 ... 64 1e-023
gb|BE215473.3|BE215473 HV_CEb0006O09f Hordeum vulgare seedl... 70 1e-023
gb|BJ545740.1|BJ545740 BJ545740 K. Sato unpublished cDNA li... 75 1e-023
gb|AV910846.1|AV910846 AV910846 K. Sato unpublished cDNA li... 75 1e-023
gb|BJ546246.1|BJ546246 BJ546246 K. Sato unpublished cDNA li... 75 1e-023
gb|BJ546018.1|BJ546018 BJ546018 K. Sato unpublished cDNA li... 75 1e-023
gb|BE193259.3|BE193259 HVSMEh0080F13f Hordeum vulgare 5-45 ... 69 2e-023
gb|AV929266.1|AV929266 AV929266 K. Sato unpublished cDNA li... 76 2e-023
gb|AV926194.1|AV926194 AV926194 K. Sato unpublished cDNA li... 109 3e-023
gb|BM372933.2|BM372933 EBma04_SQ002_H02_R maternal, 10 DPA,... 109 3e-023
gb|AV935813.1|AV935813 AV935813 K. Sato unpublished cDNA li... 74 3e-023
gb|BJ476805.1|BJ476805 BJ476805 K. Sato unpublished cDNA li... 74 3e-023
gb|BG417280.2|BG417280 HVSMEk0017B12f Hordeum vulgare testa... 93 4e-023
gb|BI952917.1|BI952917 HVSMEm0008F23f Hordeum vulgare green... 68 4e-023
gb|BE454981.1|BE454981 HVSMEh0095L21f Hordeum vulgare 5-45 ... 68 4e-023
gb|BE602375.2|BE602375 HVSMEh0098L01f Hordeum vulgare 5-45 ... 68 4e-023
gb|BI947731.1|BI947731 HVSMEl0006K11f Hordeum vulgare spike... 103 5e-023
gb|BF628657.2|BF628657 HVSMEb0006P01f Hordeum vulgare seedl... 73 7e-023
gb|BJ544300.1|BJ544300 BJ544300 K. Sato unpublished cDNA li... 76 1e-022
gb|BQ758652.1|BQ758652 EBma07_SQ002_L09_R maternal, 21 DPA,... 62 1e-022
gb|AV935770.1|AV935770 AV935770 K. Sato unpublished cDNA li... 71 2e-022
gb|AV933371.1|AV933371 AV933371 K. Sato unpublished cDNA li... 71 2e-022
gb|CD663592.1|CD663592 UCRHV18_06aa04_b1 Drought-stressed D... 71 2e-022
gb|BJ469713.1|BJ469713 BJ469713 K. Sato unpublished cDNA li... 71 2e-022
gb|BI946596.1|BI946596 HVSMEl0001A13f Hordeum vulgare spike... 70 3e-022
gb|BG415850.1|BG415850 HVSMEk0008C15f Hordeum vulgare testa... 64 5e-022
gb|BF265978.2|BF265978 HV_CEa0013N09f Hordeum vulgare seedl... 62 8e-022
gb|BG366443.1|BG366443 HVSMEi0007B04f Hordeum vulgare 20 DA... 62 8e-022
gb|CA010697.1|CA010697 HT08P16u HT Hordeum vulgare subsp. v... 63 2e-021
gb|BM369656.2|BM369656 EBem07_SQ004_D22_R embryo, 28 DPA, n... 91 4e-021
gb|BG366514.1|BG366514 HVSMEi0007F02f Hordeum vulgare 20 DA... 62 5e-021
gb|BI954237.1|BI954237 HVSMEm0016M07f Hordeum vulgare green... 58 1e-020
>gb|BF260800.3|BF260800 HVSMEf0022P16f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEf0022P16f, mRNA sequence
Length = 725
Score = 160 bits (344), Expect(4) = 6e-088
Identities = 60/91 (65%), Positives = 70/91 (76%)
Frame = +1 / +1
Query: 538 YCDPSKRQWPCAAGQKYYGRGPLQISWNYNYGPAGRAIGFDGLGDPGRVARDAVVAFKAA 717
YCD QWPC +G+ YYGRGPLQ++WNYNYG AG+++GFDGL P VA D VAFKAA
Sbjct: 340 YCDRKYTQWPCTSGKGYYGRGPLQLTWNYNYGAAGKSVGFDGLNTPENVAHDPEVAFKAA 519
Query: 718 LWFWMNSVHGVVPQGFGATTRAINGALECGG 810
LWFWMN+V V+P+GFGATTRAIN GG
Sbjct: 520 LWFWMNNVKHVLPRGFGATTRAINSGECNGG 612
Score = 124 bits (266), Expect(5) = 5e-058
Identities = 57/85 (67%), Positives = 59/85 (69%)
Frame = -3 / -1
Query: 812 FPPHSRAPLMALVVAPNPCGTTPCTLFIQNQSAALNATTASRATLPGSPSPSKPMALPAG 633
FPP L+ALVVAPNP G T TLFIQNQSAALNAT+ S AT G SPS P PA
Sbjct: 614 FPPLHSPLLIALVVAPNPRGRTCFTLFIQNQSAALNATSGSCATFSGVLSPSNPTLFPAA 435
Query: 632 P*L*FHEICSGPRP*YFCPAAHGHC 558
P*L*FH CSGPRP*Y P HGHC
Sbjct: 434 P*L*FHVSCSGPRP*YPFPEVHGHC 360
Score = 115 bits (246), Expect(4) = 6e-088
Identities = 44/67 (65%), Positives = 52/67 (77%)
Frame = +1 / +1
Query: 322 FFNGIKNQAGSGCEGKNFYTRSAFLSAVKAYPGFAHGGSQVQGKREIAAFFAHATHETGH 501
FFNGIK++AG+GC GK+FYTR +FL+ +A P F G + GKREIAAFFAH THETGH
Sbjct: 121 FFNGIKSRAGNGCAGKSFYTRPSFLAGARANPNFGKGRTTDDGKREIAAFFAHVTHETGH 300
Query: 502 FCYISEI 522
CYI EI
Sbjct: 301 MCYIEEI 321
Score = 82.2 bits (173), Expect(5) = 5e-058
Identities = 39/64 (60%), Positives = 44/64 (68%)
Frame = -3 / -1
Query: 512 M*QKCPVSCVACAKKAAISRLPCTCDPPWAKPGYALTALRNALRV*KFLPSHPLPAWFLM 333
M* CPVSCV AKKAAIS LP + P+ K G+A RN RV*K LP+HPLPA L+
Sbjct: 311 M*HMCPVSCVTWAKKAAISLLPSSVVRPFPKLGFARAPARNDGRV*KLLPAHPLPARDLI 132
Query: 332 PLKK 321
PLKK
Sbjct: 131 PLKK 120
Score = 54.7 bits (113), Expect(4) = 6e-088
Identities = 17/20 (85%), Positives = 19/20 (95%)
Frame = +3 / +1
Query: 192 KFGYCGTTDEYCGDGCQSGP 251
++GYCGTTD YCGDGCQSGP
Sbjct: 1 RYGYCGTTDAYCGDGCQSGP 60
Score = 52.4 bits (108), Expect(4) = 6e-088
Identities = 19/36 (52%), Positives = 22/36 (61%)
Frame = +1 / +2
Query: 793 ALECGGNNPAQMNARVGYYRQYCRQLGVDPGPNLTC 900
A N MNAR GYYR YC+Q G +PG +LTC
Sbjct: 593 AASATAGNSXXMNARAGYYRAYCKQFGFNPGNSLTC 700
Score = 37.3 bits (75), Expect(5) = 5e-058
Identities = 15/18 (83%), Positives = 16/18 (88%)
Frame = -1 / -1
Query: 250 GPDWHPSPQYSSVVPQ*P 197
GPD HPSPQ +SVVPQ*P
Sbjct: 59 GPD*HPSPQ*ASVVPQ*P 6
Score = 33.1 bits (66), Expect(5) = 5e-058
Identities = 16/26 (61%), Positives = 18/26 (69%)
Frame = -2 / -2
Query: 903 LAGEVGPGVDAELAAVLPVVADARVH 826
LA + P V+AEL AV PVVA RVH
Sbjct: 703 LASKAVPRVEAELLAVGPVVARPRVH 626
Score = 22.6 bits (43), Expect(5) = 5e-058
Identities = 8/10 (80%), Positives = 8/10 (80%)
Frame = -2 / -3
Query: 327 EEGAGDDASH 298
EEG GDDA H
Sbjct: 126 EEGLGDDALH 97
>gb|BF263615.1|BF263615 HV_CEa0007D10f Hordeum vulgare seedling green leaf EST library
HVcDNA0004 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEa0007D10f, mRNA sequence
Length = 617
Score = 200 bits (432), Expect(2) = 4e-072
Identities = 72/119 (60%), Positives = 89/119 (74%)
Frame = +1 / +2
Query: 544 DPSKRQWPCAAGQKYYGRGPLQISWNYNYGPAGRAIGFDGLGDPGRVARDAVVAFKAALW 723
D + +WPC +G+ YYGRGPLQ++WNYNYG AG + F+GL +P VA+D + F+AA W
Sbjct: 212 DSNHPEWPCTSGKGYYGRGPLQLTWNYNYGAAGEKLKFNGLDNPEAVAQDPALTFQAAFW 391
Query: 724 FWMNSVHGVVPQGFGATTRAINGALECGGNNPAQMNARVGYYRQYCRQLGVDPGPNLTC 900
FWM +VH V+PQGFGATT AING +EC G P +NAR GYY YC+Q GVDPG NLTC
Sbjct: 392 FWMTNVHQVLPQGFGATTSAINGYVECDGKKPDLVNARAGYYMDYCKQFGVDPGNNLTC 568
Score = 146 bits (314), Expect(2) = 2e-048
Identities = 69/113 (61%), Positives = 74/113 (65%)
Frame = -3 / -3
Query: 899 QVRLGPGSTPSWRQYCL**PTRAFIWAGLFPPHSRAPLMALVVAPNPCGTTPCTLFIQNQ 720
QVRL PGSTP+ Q +**P RAF +G P HS PL+ALVVAPNPCG T CTL IQNQ
Sbjct: 567 QVRLFPGSTPNCLQ*SM**PARAFTKSGFLPSHST*PLIALVVAPNPCGRTWCTLVIQNQ 388
Query: 719 SAALNATTASRATLPGSPSPSKPMALPAGP*L*FHEICSGPRP*YFCPAAHGH 561
+AA N S AT G SP PA P*L*FH CSGPRP*Y P HGH
Sbjct: 387 NAAWNVNAGSCATASGLSSPLNLSFSPAAP*L*FHVSCSGPRP*YPFPEVHGH 229
Score = 91.8 bits (194), Expect(2) = 4e-072
Identities = 35/57 (61%), Positives = 40/57 (70%)
Frame = +1 / +2
Query: 355 GCEGKNFYTRSAFLSAVKAYPGFAHGGSQVQGKREIAAFFAHATHETGHFCYISEIN 525
GC GK+FYTR +FL +A P F G + GKREIAAFFAH T ETGH CYI EI+
Sbjct: 8 GCPGKSFYTRQSFLDGAQANPDFGKGSTSDDGKREIAAFFAHVTQETGHMCYIEEID 178
Score = 66.6 bits (139), Expect(2) = 2e-048
Identities = 31/53 (58%), Positives = 34/53 (64%)
Frame = -3 / -3
Query: 512 M*QKCPVSCVACAKKAAISRLPCTCDPPWAKPGYALTALRNALRV*KFLPSHP 354
M* CPVSCV AKKAAIS LP + P+ K G+A RN RV*K LP HP
Sbjct: 165 M*HMCPVSCVTWAKKAAISLLPSSLVLPFPKSGFAWAPSRNDWRV*KLLPGHP 7
>gb|BF631681.2|BF631681 HVSMEb0016O17f Hordeum vulgare seedling shoot EST library
HVcDNA0002 (Dehydration stress) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEb0016O17f, mRNA sequence
Length = 843
Score = 115 bits (246), Expect(4) = 2e-070
Identities = 44/67 (65%), Positives = 52/67 (77%)
Frame = +1 / +2
Query: 322 FFNGIKNQAGSGCEGKNFYTRSAFLSAVKAYPGFAHGGSQVQGKREIAAFFAHATHETGH 501
FFNGIK++AG+GC GK+FYTR +FL+ +A P F G + GKREIAAFFAH THETGH
Sbjct: 269 FFNGIKSRAGNGCAGKSFYTRPSFLAGARANPNFGKGRTTDDGKREIAAFFAHVTHETGH 448
Query: 502 FCYISEI 522
CYI EI
Sbjct: 449 MCYIEEI 469
Score = 90.9 bits (192), Expect(4) = 2e-070
Identities = 30/43 (69%), Positives = 36/43 (83%)
Frame = +3 / +2
Query: 123 LLCAVAGPAAAQNCGCQPNVCCSKFGYCGTTDEYCGDGCQSGP 251
++ + AG AAQNCGC+ N CCS++GYCGTTD YCGDGCQSGP
Sbjct: 80 VVLSAAGMVAAQNCGCRANECCSRYGYCGTTDAYCGDGCQSGP 208
Score = 87.7 bits (185), Expect(4) = 2e-070
Identities = 30/52 (57%), Positives = 39/52 (75%)
Frame = +1 / +2
Query: 538 YCDPSKRQWPCAAGQKYYGRGPLQISWNYNYGPAGRAIGFDGLGDPGRVARD 693
YCD QWPC +G+ YYGRGPLQ++WNYNY AG++ F GL +PG+ A+D
Sbjct: 488 YCDRKYTQWPCTSGKGYYGRGPLQLTWNYNYRAAGKSFRFYGLTNPGKGAQD 643
Score = 82.2 bits (173), Expect(4) = 8e-041
Identities = 39/64 (60%), Positives = 44/64 (68%)
Frame = -3 / -1
Query: 512 M*QKCPVSCVACAKKAAISRLPCTCDPPWAKPGYALTALRNALRV*KFLPSHPLPAWFLM 333
M* CPVSCV AKKAAIS LP + P+ K G+A RN RV*K LP+HPLPA L+
Sbjct: 459 M*HMCPVSCVTWAKKAAISLLPSSVVRPFPKLGFARAPARNDGRV*KLLPAHPLPARDLI 280
Query: 332 PLKK 321
PLKK
Sbjct: 279 PLKK 268
Score = 62.9 bits (131), Expect(4) = 8e-041
Identities = 27/38 (71%), Positives = 29/38 (76%)
Frame = -1 / -1
Query: 250 GPDWHPSPQYSSVVPQ*PNLLQQTFGWQPQFCAAAGPA 137
GPD HPSPQ +SVVPQ*P LQ +F QPQFCAA PA
Sbjct: 207 GPD*HPSPQ*ASVVPQ*PYRLQHSFARQPQFCAATIPA 94
Score = 56.1 bits (116), Expect(4) = 8e-041
Identities = 30/70 (42%), Positives = 31/70 (44%)
Frame = -3 / -1
Query: 767 PNPCGTTPCTLFIQNQSAALNATTASRATLPGSPSPSKPMALPAGP*L*FHEICSGPRP* 588
P P G L L S A PG SP PA *L*FH C+GPRP*
Sbjct: 717 PTPRGRLLLHLVHPEPEPRLEHHFGSCAPFPGFVSP*NLKLFPAAL*L*FHVSCNGPRP* 538
Query: 587 YFCPAAHGHC 558
Y P HGHC
Sbjct: 537 YPFPEVHGHC 508
Score = 30.4 bits (60), Expect(4) = 2e-070
Identities = 12/23 (52%), Positives = 13/23 (56%)
Frame = +1 / +1
Query: 673 PGRVARDAVVAFKAALWFWMNSV 741
PG+ V FKA LWF MN V
Sbjct: 622 PGKRGAGPKVVFKAGLWFGMNKV 690
Score = 22.6 bits (43), Expect(4) = 8e-041
Identities = 8/10 (80%), Positives = 8/10 (80%)
Frame = -2 / -3
Query: 327 EEGAGDDASH 298
EEG GDDA H
Sbjct: 274 EEGLGDDALH 245
>gb|CA031549.1|CA031549 HX10F18r HX Hordeum vulgare subsp. vulgare cDNA clone HX10F18
5-PRIME, mRNA sequence
Length = 613
Score = 138 bits (296), Expect(4) = 2e-070
Identities = 48/74 (64%), Positives = 61/74 (82%)
Frame = +1 / +1
Query: 538 YCDPSKRQWPCAAGQKYYGRGPLQISWNYNYGPAGRAIGFDGLGDPGRVARDAVVAFKAA 717
YCD QWPC +G+ YYGRGPLQ++WNYNYG AG+++GFDGL +P +VA+D VAFKAA
Sbjct: 334 YCDRKYTQWPCTSGKGYYGRGPLQLTWNYNYGAAGKSVGFDGLNNPEKVAQDPEVAFKAA 513
Query: 718 LWFWMNSVHGVVPQ 759
LWFWMN+V V+P+
Sbjct: 514 LWFWMNNVKQVLPR 555
Score = 115 bits (246), Expect(4) = 2e-070
Identities = 44/67 (65%), Positives = 52/67 (77%)
Frame = +1 / +1
Query: 322 FFNGIKNQAGSGCEGKNFYTRSAFLSAVKAYPGFAHGGSQVQGKREIAAFFAHATHETGH 501
FFNGIK++AG+GC GK+FYTR +FL+ +A P F G + GKREIAAFFAH THETGH
Sbjct: 115 FFNGIKSRAGNGCAGKSFYTRPSFLAGARANPNFGKGRTTDDGKREIAAFFAHVTHETGH 294
Query: 502 FCYISEI 522
CYI EI
Sbjct: 295 MCYIEEI 315
Score = 100 bits (213), Expect(5) = 1e-047
Identities = 45/66 (68%), Positives = 46/66 (69%)
Frame = -3 / -3
Query: 755 GTTPCTLFIQNQSAALNATTASRATLPGSPSPSKPMALPAGP*L*FHEICSGPRP*YFCP 576
G T TLFIQNQSAALNAT+ S AT G SPS P PA P*L*FH CSGPRP*Y P
Sbjct: 551 GRTCFTLFIQNQSAALNATSGSCATFSGLLSPSNPTLFPAAP*L*FHVSCSGPRP*YPFP 372
Query: 575 AAHGHC 558
HGHC
Sbjct: 371 EVHGHC 354
Score = 82.2 bits (173), Expect(5) = 1e-047
Identities = 39/64 (60%), Positives = 44/64 (68%)
Frame = -3 / -3
Query: 512 M*QKCPVSCVACAKKAAISRLPCTCDPPWAKPGYALTALRNALRV*KFLPSHPLPAWFLM 333
M* CPVSCV AKKAAIS LP + P+ K G+A RN RV*K LP+HPLPA L+
Sbjct: 305 M*HMCPVSCVTWAKKAAISLLPSSVVRPFPKLGFARAPARNDGRV*KLLPAHPLPARDLI 126
Query: 332 PLKK 321
PLKK
Sbjct: 125 PLKK 114
Score = 42.3 bits (86), Expect(4) = 2e-070
Identities = 14/15 (93%), Positives = 14/15 (93%)
Frame = +3 / +1
Query: 207 GTTDEYCGDGCQSGP 251
GTTD YCGDGCQSGP
Sbjct: 10 GTTDAYCGDGCQSGP 54
Score = 31.3 bits (62), Expect(5) = 1e-047
Identities = 12/15 (80%), Positives = 13/15 (86%)
Frame = -1 / -3
Query: 250 GPDWHPSPQYSSVVP 206
GPD HPSPQ +SVVP
Sbjct: 53 GPD*HPSPQ*ASVVP 9
Score = 28.1 bits (55), Expect(5) = 1e-047
Identities = 12/18 (66%), Positives = 12/18 (66%)
Frame = -2 / -1
Query: 813 VPAALEGAVDGPGGGAEP 760
VPA AVD PGG AEP
Sbjct: 610 VPAVALAAVDCPGGRAEP 557
Score = 27.6 bits (54), Expect(4) = 2e-070
Identities = 12/18 (66%), Positives = 13/18 (72%)
Frame = +1 / +2
Query: 763 FGATTRAINGALECGGNN 816
FGATTRAIN GGN+
Sbjct: 560 FGATTRAINSGECNGGNS 613
Score = 22.6 bits (43), Expect(5) = 1e-047
Identities = 8/10 (80%), Positives = 8/10 (80%)
Frame = -2 / -2
Query: 327 EEGAGDDASH 298
EEG GDDA H
Sbjct: 120 EEGLGDDALH 91
>gb|BJ458220.1|BJ458220 BJ458220 K. Sato unpublished cDNA library, cv. Akashinriki
vegetative stage leaves Hordeum vulgare subsp. vulgare
cDNA clone baak31c19 3', mRNA sequence
Length = 537
Score = 167 bits (359), Expect(3) = 4e-067
Identities = 62/95 (65%), Positives = 76/95 (80%)
Frame = +1 / -2
Query: 538 YCDPSKRQWPCAAGQKYYGRGPLQISWNYNYGPAGRAIGFDGLGDPGRVARDAVVAFKAA 717
YCD QWPC +G+ YYGRGPLQ++WNYNYG AG+++GFDGL +P +VA+D VAFKAA
Sbjct: 425 YCDRKYTQWPCTSGKGYYGRGPLQLTWNYNYGAAGKSVGFDGLNNPEKVAQDPEVAFKAA 246
Query: 718 LWFWMNSVHGVVPQGFGATTRAINGALECGGNNPA 822
LWFWMN+V V+P+GFGATTRAIN GGN+ A
Sbjct: 245 LWFWMNNVKQVLPRGFGATTRAINSGECNGGNSAA 141
Score = 125 bits (267), Expect(3) = 4e-042
Identities = 58/88 (65%), Positives = 60/88 (68%)
Frame = -3 / +1
Query: 821 AGLFPPHSRAPLMALVVAPNPCGTTPCTLFIQNQSAALNATTASRATLPGSPSPSKPMAL 642
A FPP L+ALVVAPNP G T TLFIQNQSAALNAT+ S AT G SPS P
Sbjct: 142 AAEFPPLHSPLLIALVVAPNPRGRTCFTLFIQNQSAALNATSGSCATFSGLLSPSNPTLF 321
Query: 641 PAGP*L*FHEICSGPRP*YFCPAAHGHC 558
PA P*L*FH CSGPRP*Y P HGHC
Sbjct: 322 PAAP*L*FHVSCSGPRP*YPFPEVHGHC 405
Score = 67.5 bits (141), Expect(3) = 4e-067
Identities = 24/34 (70%), Positives = 26/34 (76%)
Frame = +1 / -2
Query: 799 ECGGNNPAQMNARVGYYRQYCRQLGVDPGPNLTC 900
EC G N A MNAR GYYR YC+Q GVDPG +LTC
Sbjct: 167 ECNGGNSAAMNARAGYYRAYCKQFGVDPGNSLTC 66
Score = 59.7 bits (124), Expect(3) = 4e-067
Identities = 23/31 (74%), Positives = 24/31 (77%)
Frame = +1 / -2
Query: 430 GGSQVQGKREIAAFFAHATHETGHFCYISEI 522
G + GKREIAAFFAH THETGH CYI EI
Sbjct: 536 GRTTDDGKREIAAFFAHVTHETGHMCYIEEI 444
Score = 44.6 bits (91), Expect(3) = 4e-042
Identities = 19/28 (67%), Positives = 20/28 (71%)
Frame = -3 / +1
Query: 512 M*QKCPVSCVACAKKAAISRLPCTCDPP 429
M* CPVSCV CAKKAAIS LP + P
Sbjct: 454 M*HMCPVSCVTCAKKAAISLLPSSVVRP 537
Score = 40.9 bits (83), Expect(3) = 4e-042
Identities = 22/35 (62%), Positives = 22/35 (62%)
Frame = -2 / +3
Query: 903 LAGEVGPGVDAELAAVLPVVADARVHLGGVVPAAL 799
LA E P VDAEL AV PVVA RVH G V AL
Sbjct: 63 LASEAVPRVDAELLAVGPVVARPRVHGGRVPAVAL 167
>gb|BQ768685.1|BQ768685 EBro08_SQ012_K12_R root, 3 week, drought-stressed, cv Optic, EBro08
Hordeum vulgare subsp. vulgare cDNA clone
EBro08_SQ012_K12 5', mRNA sequence
Length = 592
Score = 115 bits (246), Expect(3) = 2e-063
Identities = 44/67 (65%), Positives = 52/67 (77%)
Frame = +1 / +3
Query: 322 FFNGIKNQAGSGCEGKNFYTRSAFLSAVKAYPGFAHGGSQVQGKREIAAFFAHATHETGH 501
FFNGIK++AG+GC GK+FYTR +FL+ +A P F G + GKREIAAFFAH THETGH
Sbjct: 261 FFNGIKSRAGNGCAGKSFYTRPSFLAGARANPNFGKGRTTDDGKREIAAFFAHVTHETGH 440
Query: 502 FCYISEI 522
CYI EI
Sbjct: 441 MCYIEEI 461
Score = 90.9 bits (192), Expect(3) = 2e-063
Identities = 30/43 (69%), Positives = 36/43 (83%)
Frame = +3 / +3
Query: 123 LLCAVAGPAAAQNCGCQPNVCCSKFGYCGTTDEYCGDGCQSGP 251
++ + AG AAQNCGC+ N CCS++GYCGTTD YCGDGCQSGP
Sbjct: 72 VVLSAAGMVAAQNCGCRANECCSRYGYCGTTDAYCGDGCQSGP 200
Score = 82.2 bits (173), Expect(4) = 4e-040
Identities = 39/64 (60%), Positives = 44/64 (68%)
Frame = -3 / -1
Query: 512 M*QKCPVSCVACAKKAAISRLPCTCDPPWAKPGYALTALRNALRV*KFLPSHPLPAWFLM 333
M* CPVSCV AKKAAIS LP + P+ K G+A RN RV*K LP+HPLPA L+
Sbjct: 451 M*HMCPVSCVTWAKKAAISLLPSSVVRPFPKLGFARAPARNDGRV*KLLPAHPLPARDLI 272
Query: 332 PLKK 321
PLKK
Sbjct: 271 PLKK 260
Score = 76.2 bits (160), Expect(3) = 2e-063
Identities = 24/37 (64%), Positives = 30/37 (81%)
Frame = +1 / +3
Query: 538 YCDPSKRQWPCAAGQKYYGRGPLQISWNYNYGPAGRA 648
YCD QWPC +G+ YYGRGPLQ++WNYNYG AG++
Sbjct: 480 YCDRKYTQWPCTSGKGYYGRGPLQLTWNYNYGAAGKS 590
Score = 62.9 bits (131), Expect(4) = 4e-040
Identities = 27/38 (71%), Positives = 29/38 (76%)
Frame = -1 / -1
Query: 250 GPDWHPSPQYSSVVPQ*PNLLQQTFGWQPQFCAAAGPA 137
GPD HPSPQ +SVVPQ*P LQ +F QPQFCAA PA
Sbjct: 199 GPD*HPSPQ*ASVVPQ*PYRLQHSFARQPQFCAATIPA 86
Score = 53.8 bits (111), Expect(4) = 4e-040
Identities = 21/28 (75%), Positives = 21/28 (75%)
Frame = -3 / -1
Query: 641 PAGP*L*FHEICSGPRP*YFCPAAHGHC 558
PA P*L*FH CSGPRP*Y P HGHC
Sbjct: 583 PAAP*L*FHVSCSGPRP*YPFPEVHGHC 500
Score = 22.6 bits (43), Expect(4) = 4e-040
Identities = 8/10 (80%), Positives = 8/10 (80%)
Frame = -2 / -3
Query: 327 EEGAGDDASH 298
EEG GDDA H
Sbjct: 266 EEGLGDDALH 237
>gb|BE559148.1|BE559148 HV_CEb0023K15f Hordeum vulgare seedling green leaf EST library
HVcDNA0005 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEb0023K15f, mRNA sequence
Length = 551
Score = 149 bits (320), Expect(3) = 7e-062
Identities = 53/80 (66%), Positives = 63/80 (78%)
Frame = +1 / -3
Query: 529 SNAYCDPSKRQWPCAAGQKYYGRGPLQISWNYNYGPAGRAIGFDGLGDPGRVARDAVVAF 708
S YCDP+ +WPC AG+ YYGRGPLQ SWNYNYG AG+++GFDGL DP VAR V+AF
Sbjct: 480 SKNYCDPTNTEWPCVAGKGYYGRGPLQFSWNYNYGAAGQSLGFDGLNDPDAVARSPVLAF 301
Query: 709 KAALWFWMNSVHGVVPQGFG 768
+AALW+WMNSVH V+ G G
Sbjct: 300 QAALWYWMNSVHDVIVSGQG 241
Score = 99.1 bits (210), Expect(2) = 6e-036
Identities = 47/69 (68%), Positives = 47/69 (68%)
Frame = -3 / +2
Query: 767 PNPCGTTPCTLFIQNQSAALNATTASRATLPGSPSPSKPMALPAGP*L*FHEICSGPRP* 588
P P T CTLFIQ QSAA NA T RAT GS SPSKP PA P*L*FHE CSGPRP*
Sbjct: 242 PWPETMTSCTLFIQYQSAAWNAKTGLRATASGSLSPSKPRLCPAAP*L*FHENCSGPRP* 421
Query: 587 YFCPAAHGH 561
PA HGH
Sbjct: 422 *PFPATHGH 448
Score = 92.7 bits (196), Expect(3) = 7e-062
Identities = 34/48 (70%), Positives = 39/48 (81%)
Frame = +1 / -3
Query: 757 QGFGATTRAINGALECGGNNPAQMNARVGYYRQYCRQLGVDPGPNLTC 900
QGFGAT RAINGALEC G NP +N RV YY+Q+C+Q GVDPG +LTC
Sbjct: 246 QGFGATIRAINGALECNGKNPTAVNDRVAYYKQFCQQFGVDPGTSLTC 103
Score = 72.5 bits (152), Expect(2) = 6e-036
Identities = 35/52 (67%), Positives = 37/52 (71%)
Frame = -2 / +1
Query: 912 LASLAGEVGPGVDAELAAVLPVVADARVHLGGVVPAALEGAVDGPGGGAEPL 757
+ SLAGE GP VDAEL A L VV DA V GGV+ ALE AVDGP GGAE L
Sbjct: 91 IVSLAGEAGPRVDAELLAELLVVGDAIVDGGGVLAVALERAVDGPDGGAESL 246
Score = 35.0 bits (70), Expect(3) = 7e-062
Identities = 13/23 (56%), Positives = 15/23 (65%)
Frame = +1 / -2
Query: 463 AAFFAHATHETGHFCYISEINKS 531
AAFFAH T FCYI EI ++
Sbjct: 550 AAFFAHVNQRTIKFCYIDEIKRA 482
>gb|AV931601.1|AV931601 AV931601 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp.
vulgare cDNA clone basd23h02 3', mRNA sequence
Length = 633
Score = 167 bits (359), Expect(3) = 1e-059
Identities = 62/95 (65%), Positives = 76/95 (80%)
Frame = +1 / -2
Query: 538 YCDPSKRQWPCAAGQKYYGRGPLQISWNYNYGPAGRAIGFDGLGDPGRVARDAVVAFKAA 717
YCD QWPC +G+ YYGRGPLQ++WNYNYG AG+++GFDGL +P +VA+D VAFKAA
Sbjct: 569 YCDRKYTQWPCTSGKGYYGRGPLQLTWNYNYGAAGKSVGFDGLNNPEKVAQDPEVAFKAA 390
Query: 718 LWFWMNSVHGVVPQGFGATTRAINGALECGGNNPA 822
LWFWMN+V V+P+GFGATTRAIN GGN+ A
Sbjct: 389 LWFWMNNVKQVLPRGFGATTRAINSGECNGGNSAA 285
Score = 125 bits (267), Expect(3) = 1e-035
Identities = 58/88 (65%), Positives = 60/88 (68%)
Frame = -3 / +1
Query: 821 AGLFPPHSRAPLMALVVAPNPCGTTPCTLFIQNQSAALNATTASRATLPGSPSPSKPMAL 642
A FPP L+ALVVAPNP G T TLFIQNQSAALNAT+ S AT G SPS P
Sbjct: 286 AAEFPPLHSPLLIALVVAPNPRGRTCFTLFIQNQSAALNATSGSCATFSGLLSPSNPTLF 465
Query: 641 PAGP*L*FHEICSGPRP*YFCPAAHGHC 558
PA P*L*FH CSGPRP*Y P HGHC
Sbjct: 466 PAAP*L*FHVSCSGPRP*YPFPEVHGHC 549
Score = 65.7 bits (137), Expect(3) = 1e-059
Identities = 24/34 (70%), Positives = 26/34 (76%)
Frame = +1 / -2
Query: 799 ECGGNNPAQMNARVGYYRQYCRQLGVDPGPNLTC 900
EC G N A MNAR GYYR YC+Q GVDPG +LTC
Sbjct: 311 ECNGGNSAAMNARGGYYRAYCQQFGVDPGNSLTC 210
Score = 41.4 bits (84), Expect(3) = 1e-035
Identities = 22/35 (62%), Positives = 22/35 (62%)
Frame = -2 / +3
Query: 903 LAGEVGPGVDAELAAVLPVVADARVHLGGVVPAAL 799
LA E P VDAEL AV PVVA RVH G V AL
Sbjct: 207 LASEAVPRVDAELLAVGPVVAPPRVHGGRVPAVAL 311
Score = 36.8 bits (74), Expect(3) = 1e-059
Identities = 12/15 (80%), Positives = 12/15 (80%)
Frame = +1 / -2
Query: 478 HATHETGHFCYISEI 522
H THETGH CYI EI
Sbjct: 632 HVTHETGHMCYIEEI 588
Score = 22.1 bits (42), Expect(3) = 1e-035
Identities = 8/10 (80%), Positives = 8/10 (80%)
Frame = -3 / +1
Query: 512 M*QKCPVSCV 483
M* CPVSCV
Sbjct: 598 M*HMCPVSCV 627
>gb|BF265478.2|BF265478 HV_CEa0012G06f Hordeum vulgare seedling green leaf EST library
HVcDNA0004 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEa0012G06f, mRNA sequence
Length = 767
Score = 193 bits (415), Expect(2) = 2e-059
Identities = 71/119 (59%), Positives = 88/119 (73%)
Frame = +1 / -1
Query: 544 DPSKRQWPCAAGQKYYGRGPLQISWNYNYGPAGRAIGFDGLGDPGRVARDAVVAFKAALW 723
D + + PC + + YYGRGPLQ++WNYNYG AG + F+GL +P VA+D + F+AA W
Sbjct: 512 DSNHPE*PCTSRKGYYGRGPLQLTWNYNYGAAGEKLKFNGLDNPEAVAQDPALTFQAAFW 333
Query: 724 FWMNSVHGVVPQGFGATTRAINGALECGGNNPAQMNARVGYYRQYCRQLGVDPGPNLTC 900
FWM +VH V+PQGFGATTRAING +EC G P +NAR GYY YC+Q GVDPG NLTC
Sbjct: 332 FWMTNVHQVLPQGFGATTRAINGYVECDGKKPDLVNARAGYYMDYCKQFGVDPGNNLTC 156
Score = 142 bits (305), Expect(2) = 2e-035
Identities = 68/113 (60%), Positives = 73/113 (64%)
Frame = -3 / +1
Query: 899 QVRLGPGSTPSWRQYCL**PTRAFIWAGLFPPHSRAPLMALVVAPNPCGTTPCTLFIQNQ 720
QVRL PGSTP+ Q +**P RAF +G P HS PL+ALVVAPNPCG T CTL IQNQ
Sbjct: 157 QVRLFPGSTPNCLQ*SM**PARAFTKSGFLPSHST*PLIALVVAPNPCGRTWCTLVIQNQ 336
Query: 719 SAALNATTASRATLPGSPSPSKPMALPAGP*L*FHEICSGPRP*YFCPAAHGH 561
+AA N S AT G SP PA P*L*FH CSGPRP*Y HGH
Sbjct: 337 NAAWNVNAGSCATASGLSSPLNLSFSPAAP*L*FHVSCSGPRP*YPFREVHGH 495
Score = 57.4 bits (119), Expect(2) = 2e-059
Identities = 23/46 (50%), Positives = 28/46 (60%)
Frame = +1 / -1
Query: 388 AFLSAVKAYPGFAHGGSQVQGKREIAAFFAHATHETGHFCYISEIN 525
+FL +AYP F Q + EI AFFAH T +TGH CYI EI+
Sbjct: 683 SFLFGAQAYPRFRERHHDRQRQEEITAFFAHVTQKTGHMCYIEEID 546
Score = 27.6 bits (54), Expect(2) = 2e-035
Identities = 13/23 (56%), Positives = 13/23 (56%)
Frame = -3 / +1
Query: 512 M*QKCPVSCVACAKKAAISRLPC 444
M* CPV V AKKA IS C
Sbjct: 559 M*HMCPVFWVTWAKKAVISSCRC 627
>gb|AV926700.1|AV926700 AV926700 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp.
vulgare cDNA clone basd23h02 5', mRNA sequence
Length = 558
Score = 115 bits (246), Expect(3) = 2e-058
Identities = 44/67 (65%), Positives = 52/67 (77%)
Frame = +1 / +2
Query: 322 FFNGIKNQAGSGCEGKNFYTRSAFLSAVKAYPGFAHGGSQVQGKREIAAFFAHATHETGH 501
FFNGIK++AG+GC GK+FYTR +FL+ +A P F G + GKREIAAFFAH THETGH
Sbjct: 254 FFNGIKSRAGNGCAGKSFYTRPSFLAGARANPNFGKGRTTDDGKREIAAFFAHVTHETGH 433
Query: 502 FCYISEI 522
CYI EI
Sbjct: 434 MCYIEEI 454
Score = 90.9 bits (192), Expect(3) = 2e-058
Identities = 30/43 (69%), Positives = 36/43 (83%)
Frame = +3 / +2
Query: 123 LLCAVAGPAAAQNCGCQPNVCCSKFGYCGTTDEYCGDGCQSGP 251
++ + AG AAQNCGC+ N CCS++GYCGTTD YCGDGCQSGP
Sbjct: 65 VVLSAAGMVAAQNCGCRANECCSRYGYCGTTDAYCGDGCQSGP 193
Score = 82.2 bits (173), Expect(4) = 5e-037
Identities = 39/64 (60%), Positives = 44/64 (68%)
Frame = -3 / -1
Query: 512 M*QKCPVSCVACAKKAAISRLPCTCDPPWAKPGYALTALRNALRV*KFLPSHPLPAWFLM 333
M* CPVSCV AKKAAIS LP + P+ K G+A RN RV*K LP+HPLPA L+
Sbjct: 444 M*HMCPVSCVTWAKKAAISLLPSSVVRPFPKLGFARAPARNDGRV*KLLPAHPLPARDLI 265
Query: 332 PLKK 321
PLKK
Sbjct: 264 PLKK 253
Score = 62.9 bits (131), Expect(4) = 5e-037
Identities = 27/38 (71%), Positives = 29/38 (76%)
Frame = -1 / -1
Query: 250 GPDWHPSPQYSSVVPQ*PNLLQQTFGWQPQFCAAAGPA 137
GPD HPSPQ +SVVPQ*P LQ +F QPQFCAA PA
Sbjct: 192 GPD*HPSPQ*ASVVPQ*PYRLQHSFARQPQFCAATIPA 79
Score = 58.8 bits (122), Expect(3) = 2e-058
Identities = 18/28 (64%), Positives = 22/28 (78%)
Frame = +1 / +2
Query: 538 YCDPSKRQWPCAAGQKYYGRGPLQISWN 621
YCD QWPC +G+ YYGRGPLQ++WN
Sbjct: 473 YCDRKYTQWPCTSGKGYYGRGPLQLTWN 556
Score = 43.2 bits (88), Expect(4) = 5e-037
Identities = 16/22 (72%), Positives = 16/22 (72%)
Frame = -3 / -1
Query: 623 *FHEICSGPRP*YFCPAAHGHC 558
*FH CSGPRP*Y P HGHC
Sbjct: 558 *FHVSCSGPRP*YPFPEVHGHC 493
Score = 22.6 bits (43), Expect(4) = 5e-037
Identities = 8/10 (80%), Positives = 8/10 (80%)
Frame = -2 / -3
Query: 327 EEGAGDDASH 298
EEG GDDA H
Sbjct: 259 EEGLGDDALH 230
>gb|BE216036.2|BE216036 HV_CEb0009D03f Hordeum vulgare seedling green leaf EST library
HVcDNA0005 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEb0009D03f, mRNA sequence
Length = 557
Score = 144 bits (308), Expect(2) = 4e-055
Identities = 51/83 (61%), Positives = 65/83 (78%)
Frame = +1 / +1
Query: 544 DPSKRQWPCAAGQKYYGRGPLQISWNYNYGPAGRAIGFDGLGDPGRVARDAVVAFKAALW 723
D + +WPC +G+ YYGRGPLQ++WNYNYG AG + F+GL +P VA+D + F+AA W
Sbjct: 307 DSNHPEWPCTSGKGYYGRGPLQLTWNYNYGAAGEKLKFNGLDNPEAVAQDPALTFQAAFW 486
Query: 724 FWMNSVHGVVPQGFGATTRAING 792
FWM +VH V+PQGFGATTRAING
Sbjct: 487 FWMTNVHQVLPQGFGATTRAING 555
Score = 108 bits (231), Expect(2) = 5e-037
Identities = 49/77 (63%), Positives = 51/77 (66%)
Frame = -3 / -1
Query: 791 PLMALVVAPNPCGTTPCTLFIQNQSAALNATTASRATLPGSPSPSKPMALPAGP*L*FHE 612
PL+ALVVAPNPCG T CTL IQNQ+AA N S AT G SP PA P*L*FH
Sbjct: 554 PLIALVVAPNPCGRTWCTLVIQNQNAAWNVNAGSCATASGLSSPLNLSFSPAAP*L*FHV 375
Query: 611 ICSGPRP*YFCPAAHGH 561
CSGPRP*Y P HGH
Sbjct: 374 SCSGPRP*YPFPEVHGH 324
Score = 91.8 bits (194), Expect(2) = 4e-055
Identities = 35/57 (61%), Positives = 40/57 (70%)
Frame = +1 / +1
Query: 355 GCEGKNFYTRSAFLSAVKAYPGFAHGGSQVQGKREIAAFFAHATHETGHFCYISEIN 525
GC GK+FYTR +FL +A P F G + GKREIAAFFAH T ETGH CYI EI+
Sbjct: 103 GCPGKSFYTRQSFLDGAQANPDFGKGSTSDDGKREIAAFFAHVTQETGHMCYIEEID 273
Score = 66.6 bits (139), Expect(2) = 5e-037
Identities = 31/53 (58%), Positives = 34/53 (64%)
Frame = -3 / -1
Query: 512 M*QKCPVSCVACAKKAAISRLPCTCDPPWAKPGYALTALRNALRV*KFLPSHP 354
M* CPVSCV AKKAAIS LP + P+ K G+A RN RV*K LP HP
Sbjct: 260 M*HMCPVSCVTWAKKAAISLLPSSLVLPFPKSGFAWAPSRNDWRV*KLLPGHP 102
>gb|BJ458244.1|BJ458244 BJ458244 K. Sato unpublished cDNA library, cv. Akashinriki
vegetative stage leaves Hordeum vulgare subsp. vulgare
cDNA clone baak31e07 3', mRNA sequence
Length = 536
Score = 167 bits (359), Expect(2) = 8e-055
Identities = 62/95 (65%), Positives = 76/95 (80%)
Frame = +1 / -1
Query: 538 YCDPSKRQWPCAAGQKYYGRGPLQISWNYNYGPAGRAIGFDGLGDPGRVARDAVVAFKAA 717
YCD QWPC +G+ YYGRGPLQ++WNYNYG AG+++GFDGL +P +VA+D VAFKAA
Sbjct: 509 YCDRKYTQWPCTSGKGYYGRGPLQLTWNYNYGAAGKSVGFDGLNNPEKVAQDPEVAFKAA 330
Query: 718 LWFWMNSVHGVVPQGFGATTRAINGALECGGNNPA 822
LWFWMN+V V+P+GFGATTRAIN GGN+ A
Sbjct: 329 LWFWMNNVKQVLPRGFGATTRAINSGECNGGNSAA 225
Score = 125 bits (267), Expect(2) = 3e-034
Identities = 58/88 (65%), Positives = 60/88 (68%)
Frame = -3 / +1
Query: 821 AGLFPPHSRAPLMALVVAPNPCGTTPCTLFIQNQSAALNATTASRATLPGSPSPSKPMAL 642
A FPP L+ALVVAPNP G T TLFIQNQSAALNAT+ S AT G SPS P
Sbjct: 226 AAEFPPLHSPLLIALVVAPNPRGRTCFTLFIQNQSAALNATSGSCATFSGLLSPSNPTLF 405
Query: 641 PAGP*L*FHEICSGPRP*YFCPAAHGHC 558
PA P*L*FH CSGPRP*Y P HGHC
Sbjct: 406 PAAP*L*FHVSCSGPRP*YPXPEVHGHC 489
Score = 67.5 bits (141), Expect(2) = 8e-055
Identities = 24/34 (70%), Positives = 26/34 (76%)
Frame = +1 / -1
Query: 799 ECGGNNPAQMNARVGYYRQYCRQLGVDPGPNLTC 900
EC G N A MNAR GYYR YC+Q GVDPG +LTC
Sbjct: 251 ECNGGNSAAMNARAGYYRAYCKQFGVDPGNSLTC 150
Score = 40.9 bits (83), Expect(2) = 3e-034
Identities = 22/35 (62%), Positives = 22/35 (62%)
Frame = -2 / +3
Query: 903 LAGEVGPGVDAELAAVLPVVADARVHLGGVVPAAL 799
LA E P VDAEL AV PVVA RVH G V AL
Sbjct: 147 LASEAVPRVDAELLAVGPVVARPRVHGGRVPAVAL 251
>gb|U02287.1|HVU02287 Hordeum vulgare cultivar NK1558 chitinase gene, complete cds
Length = 1684
Score = 110 bits (235), Expect(5) = 8e-054
Identities = 40/60 (66%), Positives = 47/60 (78%)
Frame = +1 / +3
Query: 559 QWPCAAGQKYYGRGPLQISWNYNYGPAGRAIGFDGLGDPGRVARDAVVAFKAALWFWMNS 738
QWPCA G+ YYGRGP+Q+S NYNYGPAGRAIG D L +P VA D V+FK A+WFWM +
Sbjct: 1128 QWPCAPGKSYYGRGPIQLSHNYNYGPAGRAIGVDLLRNPDLVATDPTVSFKTAMWFWMTA 1307
Score = 59.7 bits (124), Expect(5) = 8e-054
Identities = 21/47 (44%), Positives = 30/47 (63%)
Frame = +1 / +3
Query: 760 GFGATTRAINGALECGGNNPAQMNARVGYYRQYCRQLGVDPGPNLTC 900
GFG T +NG +ECG +++ R+G+Y++YC LGV G NL C
Sbjct: 1392 GFGVITNIVNGGIECGHGQDSRVADRIGFYKRYCDILGVGYGNNLDC 1532
Score = 55.6 bits (115), Expect(5) = 8e-054
Identities = 22/46 (47%), Positives = 28/46 (60%)
Frame = +1 / +3
Query: 358 CEGKNFYTRSAFLSAVKAYPGFAHGGSQVQGKREIAAFFAHATHET 495
C+ K FYT AF++A A+ GF G KRE+AAF A +HET
Sbjct: 891 CQAKGFYTYDAFVAAASAFRGFGTTGGTDTRKREVAAFLAQTSHET 1028
Score = 33.1 bits (66), Expect(5) = 8e-054
Identities = 12/38 (31%), Positives = 21/38 (55%)
Frame = +3 / +3
Query: 102 LVTLGLSLLCAVAGPAAAQNCGCQPNVCCSKFGYCGTT 215
+V + ++ A + A C +CCS+FG+CG+T
Sbjct: 624 VVAMAATMAVAEQCGSQAGGATCPNCLCCSRFGWCGST 737
Score = 26.7 bits (52), Expect(5) = 8e-054
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = +3 / +3
Query: 222 YCGDGCQS 245
YCGDGCQS
Sbjct: 741 YCGDGCQS 764
>gb|BJ447651.1|BJ447651 BJ447651 K. Sato unpublished cDNA library, cv. Akashinriki
vegetative stage leaves Hordeum vulgare subsp. vulgare
cDNA clone baak16l19 5', mRNA sequence
Length = 532
Score = 207 bits (446), Expect = 1e-052
Identities = 74/119 (62%), Positives = 91/119 (76%)
Frame = +1 / +3
Query: 544 DPSKRQWPCAAGQKYYGRGPLQISWNYNYGPAGRAIGFDGLGDPGRVARDAVVAFKAALW 723
D + +WPC +G+ YYGRGPLQ++WNYNYG AG +GF+GL +P VA+D + F+AA W
Sbjct: 21 DSNHPEWPCTSGKGYYGRGPLQLTWNYNYGAAGEKLGFNGLDNPETVAQDPALTFQAAFW 200
Query: 724 FWMNSVHGVVPQGFGATTRAINGALECGGNNPAQMNARVGYYRQYCRQLGVDPGPNLTC 900
FWM +VH V+PQGFGATTRAING +EC G P +NAR GYY YC+Q GVDPG NLTC
Sbjct: 201 FWMTNVHQVLPQGFGATTRAINGYVECDGKKPDLVNARAGYYMDYCKQFGVDPGNNLTC 377
Score = 152 bits (326), Expect = 4e-036
Identities = 70/113 (61%), Positives = 76/113 (67%)
Frame = -3 / -1
Query: 899 QVRLGPGSTPSWRQYCL**PTRAFIWAGLFPPHSRAPLMALVVAPNPCGTTPCTLFIQNQ 720
QVRL PGSTP+ Q +**P RAF +G P HS PL+ALVVAPNPCG T CTL IQNQ
Sbjct: 376 QVRLFPGSTPNCLQ*SM**PARAFTKSGFLPSHST*PLIALVVAPNPCGRTWCTLVIQNQ 197
Query: 719 SAALNATTASRATLPGSPSPSKPMALPAGP*L*FHEICSGPRP*YFCPAAHGH 561
+AA N S AT+ G SP P PA P*L*FH CSGPRP*Y P HGH
Sbjct: 196 NAAWNVNAGSCATVSGLSSPLNPSFSPAAP*L*FHVSCSGPRP*YPFPEVHGH 38
>gb|BJ455403.1|BJ455403 BJ455403 K. Sato unpublished cDNA library, cv. Akashinriki
vegetative stage leaves Hordeum vulgare subsp. vulgare
cDNA clone baak16l19 3', mRNA sequence
Length = 505
Score = 207 bits (446), Expect = 1e-052
Identities = 74/119 (62%), Positives = 91/119 (76%)
Frame = +1 / -1
Query: 544 DPSKRQWPCAAGQKYYGRGPLQISWNYNYGPAGRAIGFDGLGDPGRVARDAVVAFKAALW 723
D + +WPC +G+ YYGRGPLQ++WNYNYG AG +GF+GL +P VA+D + F+AA W
Sbjct: 484 DSNHPEWPCTSGKGYYGRGPLQLTWNYNYGAAGEKLGFNGLDNPETVAQDPALTFQAAFW 305
Query: 724 FWMNSVHGVVPQGFGATTRAINGALECGGNNPAQMNARVGYYRQYCRQLGVDPGPNLTC 900
FWM +VH V+PQGFGATTRAING +EC G P +NAR GYY YC+Q GVDPG NLTC
Sbjct: 304 FWMTNVHQVLPQGFGATTRAINGYVECDGKKPDLVNARAGYYMDYCKQFGVDPGNNLTC 128
Score = 152 bits (326), Expect = 4e-036
Identities = 70/113 (61%), Positives = 76/113 (67%)
Frame = -3 / +3
Query: 899 QVRLGPGSTPSWRQYCL**PTRAFIWAGLFPPHSRAPLMALVVAPNPCGTTPCTLFIQNQ 720
QVRL PGSTP+ Q +**P RAF +G P HS PL+ALVVAPNPCG T CTL IQNQ
Sbjct: 129 QVRLFPGSTPNCLQ*SM**PARAFTKSGFLPSHST*PLIALVVAPNPCGRTWCTLVIQNQ 308
Query: 719 SAALNATTASRATLPGSPSPSKPMALPAGP*L*FHEICSGPRP*YFCPAAHGH 561
+AA N S AT+ G SP P PA P*L*FH CSGPRP*Y P HGH
Sbjct: 309 NAAWNVNAGSCATVSGLSSPLNPSFSPAAP*L*FHVSCSGPRP*YPFPEVHGH 467
>gb|BQ768408.1|BQ768408 EBro08_SQ011_K13_R root, 3 week, drought-stressed, cv Optic, EBro08
Hordeum vulgare subsp. vulgare cDNA clone
EBro08_SQ011_K13 5', mRNA sequence
Length = 403
Score = 160 bits (344), Expect(2) = 5e-051
Identities = 60/93 (64%), Positives = 75/93 (80%)
Frame = +1 / +2
Query: 544 DPSKRQWPCAAGQKYYGRGPLQISWNYNYGPAGRAIGFDGLGDPGRVARDAVVAFKAALW 723
D S +WPC +G+ YYGRGPLQ++WNYNYG AG+++GFDGL +P +VA+D VAFKAALW
Sbjct: 5 DRSHPEWPCTSGKGYYGRGPLQLTWNYNYGAAGKSVGFDGLNNPEKVAQDPEVAFKAALW 184
Query: 724 FWMNSVHGVVPQGFGATTRAINGALECGGNNPA 822
FWMN+V V+P+GFGATTRAIN GGN+ A
Sbjct: 185 FWMNNVKQVLPRGFGATTRAINSGECNGGNSAA 283
Score = 121 bits (258), Expect(2) = 4e-032
Identities = 57/87 (65%), Positives = 59/87 (67%)
Frame = -3 / -2
Query: 821 AGLFPPHSRAPLMALVVAPNPCGTTPCTLFIQNQSAALNATTASRATLPGSPSPSKPMAL 642
A FPP L+ALVVAPNP G T TLFIQNQSAALNAT+ S AT G SPS P
Sbjct: 282 AAEFPPLHSPLLIALVVAPNPRGRTCFTLFIQNQSAALNATSGSCATFSGLLSPSNPTLF 103
Query: 641 PAGP*L*FHEICSGPRP*YFCPAAHGH 561
PA P*L*FH CSGPRP*Y P HGH
Sbjct: 102 PAAP*L*FHVSCSGPRP*YPFPEVHGH 22
Score = 61.6 bits (128), Expect(2) = 5e-051
Identities = 22/34 (64%), Positives = 24/34 (70%)
Frame = +1 / +2
Query: 799 ECGGNNPAQMNARVGYYRQYCRQLGVDPGPNLTC 900
EC G N A MNAR YYR YC++ GVDPG LTC
Sbjct: 257 ECNGGNSAAMNARARYYRAYCKKFGVDPGHRLTC 358
Score = 37.7 bits (76), Expect(2) = 4e-032
Identities = 21/35 (60%), Positives = 21/35 (60%)
Frame = -2 / -1
Query: 903 LAGEVGPGVDAELAAVLPVVADARVHLGGVVPAAL 799
LA E P VDAEL AV PVV RVH G V AL
Sbjct: 361 LASESVPRVDAELLAVGPVVPRPRVHGGRVPAVAL 257
>gb|BE216122.2|BE216122 HV_CEb0009I06f Hordeum vulgare seedling green leaf EST library
HVcDNA0005 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEb0009I06f, mRNA sequence
Length = 569
Score = 91.8 bits (194), Expect(3) = 2e-050
Identities = 35/57 (61%), Positives = 40/57 (70%)
Frame = +1 / +2
Query: 355 GCEGKNFYTRSAFLSAVKAYPGFAHGGSQVQGKREIAAFFAHATHETGHFCYISEIN 525
GC GK+FYTR +FL +A P F G + GKREIAAFFAH T ETGH CYI EI+
Sbjct: 272 GCPGKSFYTRQSFLDGAQANPDFGKGSTSDDGKREIAAFFAHVTQETGHMCYIEEID 442
Score = 84.0 bits (177), Expect(3) = 2e-050
Identities = 29/44 (65%), Positives = 33/44 (75%)
Frame = +3 / +2
Query: 120 SLLCAVAGPAAAQNCGCQPNVCCSKFGYCGTTDEYCGDGCQSGP 251
+L+ + AG AAQNCGCQPN CCSK+GYCGT YCG C SGP
Sbjct: 47 ALVLSGAGLVAAQNCGCQPNECCSKYGYCGTNSSYCGTDCASGP 178
Score = 66.6 bits (139), Expect(3) = 2e-031
Identities = 31/53 (58%), Positives = 34/53 (64%)
Frame = -3 / -3
Query: 512 M*QKCPVSCVACAKKAAISRLPCTCDPPWAKPGYALTALRNALRV*KFLPSHP 354
M* CPVSCV AKKAAIS LP + P+ K G+A RN RV*K LP HP
Sbjct: 429 M*HMCPVSCVTWAKKAAISLLPSSLVLPFPKSGFAWAPSRNDWRV*KLLPGHP 271
Score = 62.9 bits (131), Expect(3) = 2e-050
Identities = 19/30 (63%), Positives = 25/30 (83%)
Frame = +1 / +2
Query: 544 DPSKRQWPCAAGQKYYGRGPLQISWNYNYG 633
D + +WPC +G+ YYGRGPLQ++WNYNYG
Sbjct: 476 DSNHPEWPCTSGKGYYGRGPLQLTWNYNYG 565
Score = 62.9 bits (131), Expect(3) = 2e-031
Identities = 26/43 (60%), Positives = 29/43 (67%)
Frame = -1 / -3
Query: 250 GPDWHPSPQYSSVVPQ*PNLLQQTFGWQPQFCAAAGPATAQRS 122
GPD PQ +VPQ*P LLQ +FGWQPQFCAA PA + S
Sbjct: 177 GPDAQSVPQ*LELVPQ*PYLLQHSFGWQPQFCAATSPAPDRTS 49
Score = 44.6 bits (91), Expect(3) = 2e-031
Identities = 18/24 (75%), Positives = 18/24 (75%)
Frame = -3 / -3
Query: 632 P*L*FHEICSGPRP*YFCPAAHGH 561
P*L*FH CSGPRP*Y P HGH
Sbjct: 564 P*L*FHVSCSGPRP*YPFPEVHGH 493
>gb|BE216371.2|BE216371 HV_CEb0010F03f Hordeum vulgare seedling green leaf EST library
HVcDNA0005 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEb0010F03f, mRNA sequence
Length = 953
Score = 91.8 bits (194), Expect(3) = 5e-050
Identities = 35/57 (61%), Positives = 40/57 (70%)
Frame = +1 / +2
Query: 355 GCEGKNFYTRSAFLSAVKAYPGFAHGGSQVQGKREIAAFFAHATHETGHFCYISEIN 525
GC GK+FYTR +FL +A P F G + GKREIAAFFAH T ETGH CYI EI+
Sbjct: 296 GCPGKSFYTRQSFLDGAQANPDFGKGSTSDDGKREIAAFFAHVTQETGHMCYIEEID 466
Score = 84.0 bits (177), Expect(3) = 5e-050
Identities = 29/44 (65%), Positives = 33/44 (75%)
Frame = +3 / +2
Query: 120 SLLCAVAGPAAAQNCGCQPNVCCSKFGYCGTTDEYCGDGCQSGP 251
+L+ + AG AAQNCGCQPN CCSK+GYCGT YCG C SGP
Sbjct: 71 ALVLSGAGLVAAQNCGCQPNECCSKYGYCGTNSSYCGTDCASGP 202
Score = 66.6 bits (139), Expect(3) = 2e-031
Identities = 31/53 (58%), Positives = 34/53 (64%)
Frame = -3 / -3
Query: 512 M*QKCPVSCVACAKKAAISRLPCTCDPPWAKPGYALTALRNALRV*KFLPSHP 354
M* CPVSCV AKKAAIS LP + P+ K G+A RN RV*K LP HP
Sbjct: 453 M*HMCPVSCVTWAKKAAISLLPSSLVLPFPKSGFAWAPSRNDWRV*KLLPGHP 295
Score = 62.9 bits (131), Expect(3) = 2e-031
Identities = 26/43 (60%), Positives = 29/43 (67%)
Frame = -1 / -3
Query: 250 GPDWHPSPQYSSVVPQ*PNLLQQTFGWQPQFCAAAGPATAQRS 122
GPD PQ +VPQ*P LLQ +FGWQPQFCAA PA + S
Sbjct: 201 GPDAQSVPQ*LELVPQ*PYLLQHSFGWQPQFCAATSPAPDRTS 73
Score = 61.6 bits (128), Expect(3) = 5e-050
Identities = 18/25 (72%), Positives = 23/25 (92%)
Frame = +1 / +2
Query: 559 QWPCAAGQKYYGRGPLQISWNYNYG 633
+WPC +G+ YYGRGPLQ++WNYNYG
Sbjct: 515 EWPCTSGKGYYGRGPLQLTWNYNYG 589
Score = 44.6 bits (91), Expect(3) = 2e-031
Identities = 18/24 (75%), Positives = 18/24 (75%)
Frame = -3 / -3
Query: 632 P*L*FHEICSGPRP*YFCPAAHGH 561
P*L*FH CSGPRP*Y P HGH
Sbjct: 588 P*L*FHVSCSGPRP*YPFPEVHGH 517
>gb|BF626132.3|BF626132 HVSMEa0015P16f Hordeum vulgare seedling shoot EST library
HVcDNA0001 (Cold stress) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEa0015P16f, mRNA sequence
Length = 478
Score = 105 bits (224), Expect(3) = 1e-049
Identities = 41/66 (62%), Positives = 48/66 (72%)
Frame = +1 / +1
Query: 325 FNGIKNQAGSGCEGKNFYTRSAFLSAVKAYPGFAHGGSQVQGKREIAAFFAHATHETGHF 504
FNGIK++AG+GC GK+FYTR FL+ +A P G + GKREIA FFAH THETGH
Sbjct: 124 FNGIKSRAGNGCAGKSFYTRP*FLAGARANPNLRKGRTTDNGKREIAVFFAHVTHETGHM 303
Query: 505 CYISEI 522
CYI EI
Sbjct: 304 CYIEEI 321
Score = 78.0 bits (164), Expect(3) = 3e-027
Identities = 37/64 (57%), Positives = 42/64 (65%)
Frame = -3 / -3
Query: 512 M*QKCPVSCVACAKKAAISRLPCTCDPPWAKPGYALTALRNALRV*KFLPSHPLPAWFLM 333
M* CPVSCV AKK AIS LP + P+ K G+A RN RV*K LP+HPLPA L+
Sbjct: 311 M*HMCPVSCVTWAKKTAISLLPLSVVRPFLKLGFARAPARNYGRV*KLLPAHPLPARDLI 132
Query: 332 PLKK 321
PL K
Sbjct: 131 PLNK 120
Score = 75.8 bits (159), Expect(3) = 1e-049
Identities = 25/46 (54%), Positives = 32/46 (69%)
Frame = +1 / +1
Query: 538 YCDPSKRQWPCAAGQKYYGRGPLQISWNYNYGPAGRAIGFDGLGDP 675
YCD WPC +G+ YYG G LQ++WNYN AG ++GFDGL +P
Sbjct: 340 YCDRKCTHWPCTSGKGYYGPGALQLTWNYNSPAAGNSVGFDGLNNP 477
Score = 54.7 bits (113), Expect(3) = 1e-049
Identities = 17/20 (85%), Positives = 19/20 (95%)
Frame = +3 / +1
Query: 192 KFGYCGTTDEYCGDGCQSGP 251
++GYCGTTD YCGDGCQSGP
Sbjct: 1 RYGYCGTTDAYCGDGCQSGP 60
Score = 45.1 bits (92), Expect(3) = 3e-027
Identities = 20/39 (51%), Positives = 20/39 (51%)
Frame = -3 / -3
Query: 674 GSPSPSKPMALPAGP*L*FHEICSGPRP*YFCPAAHGHC 558
G SPS P PA L*FH C P P*Y P HG C
Sbjct: 476 GLLSPSNPTLFPAAGEL*FHVSCRAPGP*YPFPEVHGQC 360
Score = 37.3 bits (75), Expect(3) = 3e-027
Identities = 15/18 (83%), Positives = 16/18 (88%)
Frame = -1 / -3
Query: 250 GPDWHPSPQYSSVVPQ*P 197
GPD HPSPQ +SVVPQ*P
Sbjct: 59 GPD*HPSPQ*ASVVPQ*P 6
>gb|BG365536.1|BG365536 HVSMEi0003B22f Hordeum vulgare 20 DAP spike EST library HVcDNA0010
(20 DAP) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEi0003B22f, mRNA sequence
Length = 805
Score = 116 bits (247), Expect(4) = 4e-049
Identities = 42/60 (70%), Positives = 49/60 (81%)
Frame = +1 / +3
Query: 559 QWPCAAGQKYYGRGPLQISWNYNYGPAGRAIGFDGLGDPGRVARDAVVAFKAALWFWMNS 738
QWPCA G++YYGRGP+Q+S NYNYGPAGRAIG D L +P VA DA VAFK A+WFWM +
Sbjct: 342 QWPCAPGKRYYGRGPIQLSHNYNYGPAGRAIGVDLLANPDLVATDATVAFKTAIWFWMTA 521
Score = 62.0 bits (129), Expect(4) = 4e-049
Identities = 24/46 (52%), Positives = 30/46 (65%)
Frame = +1 / +3
Query: 358 CEGKNFYTRSAFLSAVKAYPGFAHGGSQVQGKREIAAFFAHATHET 495
C+ K FYT AF++A A+PGF GS KRE+AAF A +HET
Sbjct: 105 CQAKGFYTYDAFVAAASAFPGFGSTGSADAQKREVAAFLAQTSHET 242
Score = 51.9 bits (107), Expect(4) = 4e-049
Identities = 22/58 (37%), Positives = 30/58 (51%)
Frame = +1 / +3
Query: 760 GFGATTRAINGALECGGNNPAQMNARVGYYRQYCRQLGVDPGPNLTCXXXXXXXXDGG 933
GFG T ING +ECG +++ R+G Y++ LGV G NL C +GG
Sbjct: 606 GFGVITNIINGGIECGHGQDSRVADRIGLYKRC*DMLGVGYGDNLDCCSQDPGVMNGG 779
Score = 22.1 bits (42), Expect(4) = 4e-049
Identities = 7/17 (41%), Positives = 10/17 (58%)
Frame = +1 / +3
Query: 502 FCYISEINKSNAYCDPS 552
+C+ E S+ YC PS
Sbjct: 288 YCFKQERGASSDYCTPS 338
>gb|BQ755807.1|BQ755807 EBed07_SQ003_N15_R endosperm, 28 DPA, no treatment, cv Optic,
EBed07 Hordeum vulgare subsp. vulgare cDNA clone
EBed07_SQ003_N15 5', mRNA sequence
Length = 688
Score = 116 bits (247), Expect(4) = 5e-047
Identities = 42/60 (70%), Positives = 49/60 (81%)
Frame = +1 / +1
Query: 559 QWPCAAGQKYYGRGPLQISWNYNYGPAGRAIGFDGLGDPGRVARDAVVAFKAALWFWMNS 738
QWPCA G++YYGRGP+Q+S NYNYGPAGRAIG D L +P VA DA VAFK A+WFWM +
Sbjct: 208 QWPCAPGKRYYGRGPIQLSHNYNYGPAGRAIGVDLLANPDLVATDATVAFKTAIWFWMTA 387
Score = 76.7 bits (161), Expect(4) = 9e-025
Identities = 38/58 (65%), Positives = 38/58 (65%)
Frame = -3 / -3
Query: 731 IQNQSAALNATTASRATLPGSPSPSKPMALPAGP*L*FHEICSGPRP*YFCPAAHGHC 558
IQNQ A LNAT AS AT G S S PMA PAGP*L* E GPRP* P AHGHC
Sbjct: 380 IQNQMAVLNATVASVATRSGLASRSTPMARPAGP*L*LWESWIGPRP**RFPGAHGHC 207
Score = 60.2 bits (125), Expect(4) = 5e-047
Identities = 22/47 (46%), Positives = 30/47 (63%)
Frame = +1 / +1
Query: 760 GFGATTRAINGALECGGNNPAQMNARVGYYRQYCRQLGVDPGPNLTC 900
GFG T ING +ECG +++ R+G+Y++YC LGV G NL C
Sbjct: 472 GFGVITNIINGGIECGRGQDSRVADRIGFYKRYCDILGVGYGNNLDC 612
Score = 46.4 bits (95), Expect(4) = 5e-047
Identities = 19/36 (52%), Positives = 24/36 (66%)
Frame = +1 / +1
Query: 388 AFLSAVKAYPGFAHGGSQVQGKREIAAFFAHATHET 495
AF++A A+PGF GS KRE+AAF A +HET
Sbjct: 1 AFVAAAAAFPGFGTTGSADAQKREVAAFLAQTSHET 108
Score = 38.2 bits (77), Expect(4) = 9e-025
Identities = 22/47 (46%), Positives = 24/47 (51%)
Frame = -3 / -3
Query: 899 QVRLGPGSTPSWRQYCL**PTRAFIWAGLFPPHSRAPLMALVVAPNP 759
Q RL P TP Q L* P R+ PHS PLM LV+ PNP
Sbjct: 611 QSRLLP*PTPRMSQ*RL*NPIRSATRLSCPRPHSIPPLMMLVITPNP 471
Score = 29.0 bits (57), Expect(4) = 9e-025
Identities = 15/32 (46%), Positives = 17/32 (53%)
Frame = -3 / -3
Query: 494 VSCVACAKKAAISRLPCTCDPPWAKPGYALTA 399
VS CA+KAA SR + P KPG A A
Sbjct: 107 VSWEVCARKAATSRFWASALPVVPKPGKAAAA 12
Score = 24.9 bits (48), Expect(4) = 9e-025
Identities = 6/11 (54%), Positives = 9/11 (81%)
Frame = -1 / -3
Query: 997 CHYCSVWRARV 965
C YC +WRA++
Sbjct: 686 CSYCILWRAKI 654
Score = 22.1 bits (42), Expect(4) = 5e-047
Identities = 7/17 (41%), Positives = 10/17 (58%)
Frame = +1 / +1
Query: 502 FCYISEINKSNAYCDPS 552
+C+ E S+ YC PS
Sbjct: 154 YCFKQERGASSDYCTPS 204
>gb|BF623642.2|BF623642 HVSMEa0003E14f Hordeum vulgare seedling shoot EST library
HVcDNA0001 (Cold stress) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEa0003E14f, mRNA sequence
Length = 488
Score = 115 bits (246), Expect(2) = 2e-046
Identities = 44/67 (65%), Positives = 52/67 (77%)
Frame = +1 / +3
Query: 322 FFNGIKNQAGSGCEGKNFYTRSAFLSAVKAYPGFAHGGSQVQGKREIAAFFAHATHETGH 501
FFNGIK++AG+GC GK+FYTR +FL+ +A P F G + GKREIAAFFAH THETGH
Sbjct: 276 FFNGIKSRAGNGCAGKSFYTRPSFLAGARANPNFGKGRTTDDGKREIAAFFAHVTHETGH 455
Query: 502 FCYISEI 522
CYI EI
Sbjct: 456 MCYIEEI 476
Score = 90.9 bits (192), Expect(2) = 2e-046
Identities = 30/43 (69%), Positives = 36/43 (83%)
Frame = +3 / +3
Query: 123 LLCAVAGPAAAQNCGCQPNVCCSKFGYCGTTDEYCGDGCQSGP 251
++ + AG AAQNCGC+ N CCS++GYCGTTD YCGDGCQSGP
Sbjct: 87 VVLSAAGMVAAQNCGCRANECCSRYGYCGTTDAYCGDGCQSGP 215
Score = 82.2 bits (173), Expect(3) = 2e-029
Identities = 39/64 (60%), Positives = 44/64 (68%)
Frame = -3 / -2
Query: 512 M*QKCPVSCVACAKKAAISRLPCTCDPPWAKPGYALTALRNALRV*KFLPSHPLPAWFLM 333
M* CPVSCV AKKAAIS LP + P+ K G+A RN RV*K LP+HPLPA L+
Sbjct: 466 M*HMCPVSCVTWAKKAAISLLPSSVVRPFPKLGFARAPARNDGRV*KLLPAHPLPARDLI 287
Query: 332 PLKK 321
PLKK
Sbjct: 286 PLKK 275
Score = 62.9 bits (131), Expect(3) = 2e-029
Identities = 27/38 (71%), Positives = 29/38 (76%)
Frame = -1 / -2
Query: 250 GPDWHPSPQYSSVVPQ*PNLLQQTFGWQPQFCAAAGPA 137
GPD HPSPQ +SVVPQ*P LQ +F QPQFCAA PA
Sbjct: 214 GPD*HPSPQ*ASVVPQ*PYRLQHSFARQPQFCAATIPA 101
Score = 22.6 bits (43), Expect(3) = 2e-029
Identities = 8/10 (80%), Positives = 8/10 (80%)
Frame = -2 / -1
Query: 327 EEGAGDDASH 298
EEG GDDA H
Sbjct: 281 EEGLGDDALH 252
>gb|BF064981.3|BF064981 HV_CEb0022E17f Hordeum vulgare seedling green leaf EST library
HVcDNA0005 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEb0022E17f, mRNA sequence
Length = 815
Score = 109 bits (233), Expect(3) = 4e-045
Identities = 39/59 (66%), Positives = 47/59 (79%)
Frame = +1 / +2
Query: 562 WPCAAGQKYYGRGPLQISWNYNYGPAGRAIGFDGLGDPGRVARDAVVAFKAALWFWMNS 738
WPCA G++YYGRGP+Q++ NYNYGPAGRAIG D L +P VA D VAFK A+WFWM +
Sbjct: 533 WPCAPGKQYYGRGPIQLTHNYNYGPAGRAIGVDLLNNPDLVASDPTVAFKTAIWFWMTT 709
Score = 55.6 bits (115), Expect(3) = 4e-045
Identities = 22/48 (45%), Positives = 28/48 (58%)
Frame = +1 / +2
Query: 352 SGCEGKNFYTRSAFLSAVKAYPGFAHGGSQVQGKREIAAFFAHATHET 495
+ C + FYT AFL+A A+P F G KRE+AAFF +HET
Sbjct: 287 AACLARGFYTYDAFLAAASAFPAFGTTGDLDTRKREVAAFFGQTSHET 430
Score = 55.6 bits (115), Expect(3) = 4e-045
Identities = 22/56 (39%), Positives = 29/56 (51%)
Frame = +3 / +2
Query: 78 APRVSAAQLVTLGLSLLCAVAGPAAAQNCGCQPNVCCSKFGYCGTTDEYCGDGCQS 245
A + A L + L A + A C +CCS+FG+CG+T YCG GCQS
Sbjct: 29 ATAILVAVLAAAAVELAMAQQCGSQAGGAKCADCMCCSQFGFCGSTSAYCGGGCQS 196
>gb|BE213990.1|BE213990 HV_CEb0001N13f Hordeum vulgare seedling green leaf EST library
HVcDNA0005 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEb0001N13f, mRNA sequence
Length = 972
Score = 91.8 bits (194), Expect(3) = 7e-045
Identities = 35/57 (61%), Positives = 40/57 (70%)
Frame = +1 / +2
Query: 355 GCEGKNFYTRSAFLSAVKAYPGFAHGGSQVQGKREIAAFFAHATHETGHFCYISEIN 525
GC GK+FYTR +FL +A P F G + GKREIAAFFAH T ETGH CYI EI+
Sbjct: 329 GCPGKSFYTRQSFLDGAQANPDFGKGSTSDDGKREIAAFFAHVTQETGHMCYIEEID 499
Score = 81.3 bits (171), Expect(3) = 7e-045
Identities = 29/44 (65%), Positives = 32/44 (72%)
Frame = +3 / +2
Query: 120 SLLCAVAGPAAAQNCGCQPNVCCSKFGYCGTTDEYCGDGCQSGP 251
+L+ + AG AAQNCGCQPN CCSK GYCGT YCG C SGP
Sbjct: 104 ALVLSGAGLVAAQNCGCQPNECCSKDGYCGTNSSYCGTDCASGP 235
Score = 66.6 bits (139), Expect(3) = 5e-028
Identities = 31/53 (58%), Positives = 34/53 (64%)
Frame = -3 / -1
Query: 512 M*QKCPVSCVACAKKAAISRLPCTCDPPWAKPGYALTALRNALRV*KFLPSHP 354
M* CPVSCV AKKAAIS LP + P+ K G+A RN RV*K LP HP
Sbjct: 486 M*HMCPVSCVTWAKKAAISLLPSSLVLPFPKSGFAWAPSRNDWRV*KLLPGHP 328
Score = 62.0 bits (129), Expect(3) = 5e-028
Identities = 25/43 (58%), Positives = 29/43 (67%)
Frame = -1 / -1
Query: 250 GPDWHPSPQYSSVVPQ*PNLLQQTFGWQPQFCAAAGPATAQRS 122
GPD PQ +VPQ P+LLQ +FGWQPQFCAA PA + S
Sbjct: 234 GPDAQSVPQ*LELVPQYPSLLQHSFGWQPQFCAATSPAPDRTS 106
Score = 46.9 bits (96), Expect(3) = 7e-045
Identities = 16/35 (45%), Positives = 22/35 (62%)
Frame = +1 / +2
Query: 544 DPSKRQWPCAAGQKYYGRGPLQISWNYNYGPAGRA 648
D + +WPC +G+ YGRGPLQ++W G G A
Sbjct: 533 DSNHPEWPCTSGKGDYGRGPLQLTWTTTTGGRGDA 637
Score = 34.1 bits (68), Expect(3) = 5e-028
Identities = 15/29 (51%), Positives = 16/29 (55%)
Frame = -3 / -1
Query: 647 ALPAGP*L*FHEICSGPRP*YFCPAAHGH 561
A P P + H CSGPRP* P HGH
Sbjct: 636 ASPRPPVVVVHVSCSGPRP*SPFPEVHGH 550
>gb|CB876220.1|CB876220 HX10K07w HX Hordeum vulgare subsp. vulgare cDNA clone HX10K07
3-PRIME, mRNA sequence
Length = 576
Score = 135 bits (290), Expect(2) = 8e-045
Identities = 52/77 (67%), Positives = 64/77 (83%)
Frame = +1 / -2
Query: 592 GRGPLQISWNYNYGPAGRAIGFDGLGDPGRVARDAVVAFKAALWFWMNSVHGVVPQGFGA 771
GRGPLQ++WNYNYG AG+++GFDGL +P +VA+D VAFKAALWFWMN+V V+P+GFGA
Sbjct: 575 GRGPLQLTWNYNYGAAGKSVGFDGLNNPEKVAQDPEVAFKAALWFWMNNVKQVLPRGFGA 396
Query: 772 TTRAINGALECGGNNPA 822
TTRAIN GGN+ A
Sbjct: 395 TTRAINSGECNGGNSAA 345
Score = 107 bits (228), Expect(2) = 4e-029
Identities = 51/77 (66%), Positives = 53/77 (68%)
Frame = -3 / +1
Query: 821 AGLFPPHSRAPLMALVVAPNPCGTTPCTLFIQNQSAALNATTASRATLPGSPSPSKPMAL 642
A FPP L+ALVVAPNP G T TLFIQNQSAALNAT+ S AT G SPS P
Sbjct: 346 AAEFPPLHSPLLIALVVAPNPRGRTCFTLFIQNQSAALNATSGSCATFSGLLSPSNPTLF 525
Query: 641 PAGP*L*FHEICSGPRP 591
PA P*L*FH CSGPRP
Sbjct: 526 PAAP*L*FHVSCSGPRP 576
Score = 65.7 bits (137), Expect(2) = 8e-045
Identities = 24/34 (70%), Positives = 26/34 (76%)
Frame = +1 / -2
Query: 799 ECGGNNPAQMNARVGYYRQYCRQLGVDPGPNLTC 900
EC G N A MNAR GYYR YC+Q GVDPG +LTC
Sbjct: 371 ECNGGNSAAMNARGGYYRAYCQQFGVDPGNSLTC 270
Score = 41.4 bits (84), Expect(2) = 4e-029
Identities = 22/35 (62%), Positives = 22/35 (62%)
Frame = -2 / +3
Query: 903 LAGEVGPGVDAELAAVLPVVADARVHLGGVVPAAL 799
LA E P VDAEL AV PVVA RVH G V AL
Sbjct: 267 LASEAVPRVDAELLAVGPVVAPPRVHGGRVPAVAL 371
>gb|BG365857.2|BG365857 HVSMEi0004I09f Hordeum vulgare 20 DAP spike EST library HVcDNA0010
(20 DAP) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEi0004I09f, mRNA sequence
Length = 933
Score = 110 bits (234), Expect(3) = 9e-045
Identities = 40/58 (68%), Positives = 46/58 (79%)
Frame = +1 / +2
Query: 559 QWPCAAGQKYYGRGPLQISWNYNYGPAGRAIGFDGLGDPGRVARDAVVAFKAALWFWM 732
QWPCA G+ YYGRGP+Q+S NYNYGPAGRAIG D L +P VA D V+FK A+WFWM
Sbjct: 566 QWPCAPGKSYYGRGPIQLSHNYNYGPAGRAIGVDLLRNPDLVATDPTVSFKTAMWFWM 739
Score = 59.3 bits (123), Expect(3) = 9e-045
Identities = 21/48 (43%), Positives = 30/48 (62%)
Frame = +3 / +2
Query: 102 LVTLGLSLLCAVAGPAAAQNCGCQPNVCCSKFGYCGTTDEYCGDGCQS 245
+V + S+ A + A C +CCS+FG+CG+T +YCGDGCQS
Sbjct: 59 VVAMAASMAVAEQCGSQAGGATCPNCLCCSRFGWCGSTSDYCGDGCQS 202
Score = 55.6 bits (115), Expect(3) = 9e-045
Identities = 22/46 (47%), Positives = 28/46 (60%)
Frame = +1 / +2
Query: 358 CEGKNFYTRSAFLSAVKAYPGFAHGGSQVQGKREIAAFFAHATHET 495
C+ K FYT AF++A A+ GF G KRE+AAF A +HET
Sbjct: 329 CQAKGFYTYDAFVAAASAFRGFGTTGGTDTRKREVAAFLAQTSHET 466
>gb|BM369392.2|BM369392 EBem07_SQ003_H07_R embryo, 28 DPA, no treatment, cv Optic, EBem07
Hordeum vulgare subsp. vulgare cDNA clone
EBem07_SQ003_H07 5', mRNA sequence
Length = 494
Score = 112 bits (240), Expect(2) = 1e-044
Identities = 43/67 (64%), Positives = 51/67 (76%)
Frame = +1 / +2
Query: 322 FFNGIKNQAGSGCEGKNFYTRSAFLSAVKAYPGFAHGGSQVQGKREIAAFFAHATHETGH 501
FFNGIK++AG+GC GK+FYTR +FL+ +A P F G + KREIAAFFAH THETGH
Sbjct: 287 FFNGIKSRAGNGCAGKSFYTRRSFLAGARANPNFGKGRTTDDAKREIAAFFAHVTHETGH 466
Query: 502 FCYISEI 522
CYI EI
Sbjct: 467 MCYIEEI 487
Score = 88.1 bits (186), Expect(2) = 1e-044
Identities = 29/44 (65%), Positives = 36/44 (81%)
Frame = +3 / +2
Query: 120 SLLCAVAGPAAAQNCGCQPNVCCSKFGYCGTTDEYCGDGCQSGP 251
+L+ + AG AAQ CGC+ N CCS++GYCGTTD YCGDGC+SGP
Sbjct: 86 ALVLSAAGMVAAQKCGCRANECCSRYGYCGTTDAYCGDGCKSGP 217
Score = 77.1 bits (162), Expect(2) = 2e-026
Identities = 37/63 (58%), Positives = 42/63 (66%)
Frame = -3 / -3
Query: 512 M*QKCPVSCVACAKKAAISRLPCTCDPPWAKPGYALTALRNALRV*KFLPSHPLPAWFLM 333
M* CPVSCV AKKAAIS L + P+ K G+A RN RV*K LP+HPLPA L+
Sbjct: 477 M*HMCPVSCVTWAKKAAISLLASSVVRPFPKLGFARAPARNDRRV*KLLPAHPLPARDLI 298
Query: 332 PLK 324
PLK
Sbjct: 297 PLK 289
Score = 62.5 bits (130), Expect(2) = 2e-026
Identities = 27/43 (62%), Positives = 30/43 (69%)
Frame = -1 / -3
Query: 250 GPDWHPSPQYSSVVPQ*PNLLQQTFGWQPQFCAAAGPATAQRS 122
GPD HPSPQ +SVVPQ*P LQ +F QP FCAA PA + S
Sbjct: 216 GPDLHPSPQ*ASVVPQ*PYRLQHSFARQPHFCAATIPAADRTS 88
>gb|BE558718.1|BE558718 HV_CEb0020C16f Hordeum vulgare seedling green leaf EST library
HVcDNA0005 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEb0020C16f, mRNA sequence
Length = 789
Score = 89.0 bits (188), Expect(3) = 6e-044
Identities = 34/57 (59%), Positives = 39/57 (68%)
Frame = +1 / +2
Query: 355 GCEGKNFYTRSAFLSAVKAYPGFAHGGSQVQGKREIAAFFAHATHETGHFCYISEIN 525
GC GK+FYTR + L +A P F G + GKREIAAFFAH T ETGH CYI EI+
Sbjct: 302 GCPGKSFYTRQSLLDGAQANPDFGKGSTSDDGKREIAAFFAHVTQETGHMCYIEEID 472
Score = 84.0 bits (177), Expect(3) = 6e-044
Identities = 29/44 (65%), Positives = 33/44 (75%)
Frame = +3 / +2
Query: 120 SLLCAVAGPAAAQNCGCQPNVCCSKFGYCGTTDEYCGDGCQSGP 251
+L+ + AG AAQNCGCQPN CCSK+GYCGT YCG C SGP
Sbjct: 77 ALVLSGAGLVAAQNCGCQPNECCSKYGYCGTNSSYCGTDCASGP 208
Score = 63.8 bits (133), Expect(3) = 2e-025
Identities = 30/53 (56%), Positives = 33/53 (62%)
Frame = -3 / -1
Query: 512 M*QKCPVSCVACAKKAAISRLPCTCDPPWAKPGYALTALRNALRV*KFLPSHP 354
M* CPVSCV AKKAAIS LP + P+ K G+A N RV*K LP HP
Sbjct: 459 M*HMCPVSCVTWAKKAAISLLPSSLVLPFPKSGFAWAPSSNDWRV*KLLPGHP 301
Score = 62.9 bits (131), Expect(3) = 2e-025
Identities = 26/43 (60%), Positives = 29/43 (67%)
Frame = -1 / -1
Query: 250 GPDWHPSPQYSSVVPQ*PNLLQQTFGWQPQFCAAAGPATAQRS 122
GPD PQ +VPQ*P LLQ +FGWQPQFCAA PA + S
Sbjct: 207 GPDAQSVPQ*LELVPQ*PYLLQHSFGWQPQFCAATSPAPDRTS 79
Score = 43.7 bits (89), Expect(3) = 6e-044
Identities = 17/37 (45%), Positives = 22/37 (59%)
Frame = +1 / +3
Query: 580 QKYYGRGPLQISWNYNYGPAGRAIGFDGLGDPGRVAR 690
++YYGR PLQ++WNYNY GL +P R R
Sbjct: 543 KEYYGRRPLQLTWNYNYWAGRGEAQVHGLDNPKRWRR 653
Score = 27.2 bits (53), Expect(3) = 2e-025
Identities = 12/15 (80%), Positives = 12/15 (80%)
Frame = -3 / -3
Query: 629 *L*FHEICSGPRP*Y 585
*L*FH CSG RP*Y
Sbjct: 592 *L*FHVSCSGRRP*Y 548
>gb|BG300488.1|BG300488 HVSMEb0017D20f Hordeum vulgare seedling shoot EST library
HVcDNA0002 (Dehydration stress) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEb0017D20f, mRNA sequence
Length = 876
Score = 94.1 bits (199), Expect(3) = 1e-043
Identities = 37/59 (62%), Positives = 44/59 (74%)
Frame = +1 / +2
Query: 322 FFNGIKNQAGSGCEGKNFYTRSAFLSAVKAYPGFAHGGSQVQGKREIAAFFAHATHETG 498
FFNGIK++AG+GC GK+FYTR FL+ +A P G + GKREIAAFFAH THETG
Sbjct: 269 FFNGIKSRAGNGCAGKSFYTRPWFLAGARANPNLGKGRTTDNGKREIAAFFAHVTHETG 445
Score = 90.9 bits (192), Expect(3) = 1e-043
Identities = 30/43 (69%), Positives = 36/43 (83%)
Frame = +3 / +2
Query: 123 LLCAVAGPAAAQNCGCQPNVCCSKFGYCGTTDEYCGDGCQSGP 251
++ + AG AAQNCGC+ N CCS++GYCGTTD YCGDGCQSGP
Sbjct: 80 VVLSAAGMVAAQNCGCRANECCSRYGYCGTTDAYCGDGCQSGP 208
Score = 75.8 bits (159), Expect(4) = 2e-028
Identities = 36/59 (61%), Positives = 41/59 (69%)
Frame = -3 / -1
Query: 497 PVSCVACAKKAAISRLPCTCDPPWAKPGYALTALRNALRV*KFLPSHPLPAWFLMPLKK 321
PVSCV AKKAAIS LP + P+ K G+A RN RV*K LP+HPLPA L+PLKK
Sbjct: 444 PVSCVTWAKKAAISLLPLSVVRPFPKLGFARAPARNHGRV*KLLPAHPLPARDLIPLKK 268
Score = 62.9 bits (131), Expect(4) = 2e-028
Identities = 27/38 (71%), Positives = 29/38 (76%)
Frame = -1 / -1
Query: 250 GPDWHPSPQYSSVVPQ*PNLLQQTFGWQPQFCAAAGPA 137
GPD HPSPQ +SVVPQ*P LQ +F QPQFCAA PA
Sbjct: 207 GPD*HPSPQ*ASVVPQ*PYRLQHSFARQPQFCAATIPA 94
Score = 36.3 bits (73), Expect(3) = 1e-043
Identities = 11/19 (57%), Positives = 14/19 (73%)
Frame = +1 / +3
Query: 577 GQKYYGRGPLQISWNYNYG 633
G+ YYGRGPL ++W YG
Sbjct: 609 GEGYYGRGPLHLTWTTTYG 665
Score = 26.7 bits (52), Expect(4) = 2e-028
Identities = 11/19 (57%), Positives = 13/19 (68%)
Frame = -3 / -3
Query: 632 P*L*FHEICSGPRP*YFCP 576
P*+ H C+GPRP*Y P
Sbjct: 664 P*VVVHVRCNGPRP*YPSP 608
Score = 22.6 bits (43), Expect(4) = 2e-028
Identities = 8/10 (80%), Positives = 8/10 (80%)
Frame = -2 / -3
Query: 327 EEGAGDDASH 298
EEG GDDA H
Sbjct: 274 EEGLGDDALH 245
>gb|BM368400.2|BM368400 EBem08_SQ002_B18_R embryo, 40 DPA, no treatment, cv Optic, EBem08
Hordeum vulgare subsp. vulgare cDNA clone
EBem08_SQ002_B18 5', mRNA sequence
Length = 454
Score = 102 bits (217), Expect(2) = 2e-042
Identities = 39/60 (65%), Positives = 47/60 (78%)
Frame = +1 / +3
Query: 322 FFNGIKNQAGSGCEGKNFYTRSAFLSAVKAYPGFAHGGSQVQGKREIAAFFAHATHETGH 501
FFNGIK++AG+GC GK+FYTR +FL+ +A P F G + GKREIAAFFAH THETGH
Sbjct: 270 FFNGIKSRAGNGCAGKSFYTRPSFLAGARANPNFGKGRTTDDGKREIAAFFAHVTHETGH 449
Score = 90.9 bits (192), Expect(2) = 2e-042
Identities = 30/43 (69%), Positives = 36/43 (83%)
Frame = +3 / +3
Query: 123 LLCAVAGPAAAQNCGCQPNVCCSKFGYCGTTDEYCGDGCQSGP 251
++ + AG AAQNCGC+ N CCS++GYCGTTD YCGDGCQSGP
Sbjct: 81 VVLSAAGMVAAQNCGCRANECCSRYGYCGTTDAYCGDGCQSGP 209
Score = 79.9 bits (168), Expect(3) = 9e-029
Identities = 37/60 (61%), Positives = 42/60 (70%)
Frame = -3 / -1
Query: 500 CPVSCVACAKKAAISRLPCTCDPPWAKPGYALTALRNALRV*KFLPSHPLPAWFLMPLKK 321
CPVSCV AKKAAIS LP + P+ K G+A RN RV*K LP+HPLPA L+PLKK
Sbjct: 448 CPVSCVTWAKKAAISLLPSSVVRPFPKLGFARAPARNDGRV*KLLPAHPLPARDLIPLKK 269
Score = 62.9 bits (131), Expect(3) = 9e-029
Identities = 27/38 (71%), Positives = 29/38 (76%)
Frame = -1 / -1
Query: 250 GPDWHPSPQYSSVVPQ*PNLLQQTFGWQPQFCAAAGPA 137
GPD HPSPQ +SVVPQ*P LQ +F QPQFCAA PA
Sbjct: 208 GPD*HPSPQ*ASVVPQ*PYRLQHSFARQPQFCAATIPA 95
Score = 22.6 bits (43), Expect(3) = 9e-029
Identities = 8/10 (80%), Positives = 8/10 (80%)
Frame = -2 / -3
Query: 327 EEGAGDDASH 298
EEG GDDA H
Sbjct: 275 EEGLGDDALH 246
>gb|BG365887.1|BG365887 HVSMEi0004K07f Hordeum vulgare 20 DAP spike EST library HVcDNA0010
(20 DAP) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEi0004K07f, mRNA sequence
Length = 937
Score = 104 bits (221), Expect(3) = 3e-042
Identities = 39/60 (65%), Positives = 46/60 (76%)
Frame = +1 / +2
Query: 559 QWPCAAGQKYYGRGPLQISWNYNYGPAGRAIGFDGLGDPGRVARDAVVAFKAALWFWMNS 738
QWPCA G+ YYGRGP+Q+S NYNY PAGRAIG L +P VA D V+FK A+WFWMN+
Sbjct: 560 QWPCAPGKSYYGRGPIQLSHNYNYWPAGRAIGVYLLRNPDLVATDPNVSFKTAMWFWMNA 739
Score = 56.5 bits (117), Expect(3) = 3e-042
Identities = 20/48 (41%), Positives = 29/48 (60%)
Frame = +3 / +2
Query: 102 LVTLGLSLLCAVAGPAAAQNCGCQPNVCCSKFGYCGTTDEYCGDGCQS 245
+V + S+ A + A C +CCS+F +CG+T +YCGDGCQS
Sbjct: 53 VVAMAASMTVAEQCGSQAGGATCPNCLCCSRFSWCGSTSDYCGDGCQS 196
Score = 55.6 bits (115), Expect(3) = 3e-042
Identities = 22/46 (47%), Positives = 28/46 (60%)
Frame = +1 / +2
Query: 358 CEGKNFYTRSAFLSAVKAYPGFAHGGSQVQGKREIAAFFAHATHET 495
C+ K FYT AF++A A+ GF G KRE+AAF A +HET
Sbjct: 323 CQAKGFYTYDAFVAAASAFRGFGTTGGTDTRKREVAAFLAQTSHET 460
>gb|BG365634.2|BG365634 HVSMEi0003I02f Hordeum vulgare 20 DAP spike EST library HVcDNA0010
(20 DAP) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEi0003I02f, mRNA sequence
Length = 741
Score = 116 bits (247), Expect(4) = 7e-042
Identities = 42/60 (70%), Positives = 49/60 (81%)
Frame = +1 / +3
Query: 559 QWPCAAGQKYYGRGPLQISWNYNYGPAGRAIGFDGLGDPGRVARDAVVAFKAALWFWMNS 738
QWPCA G++YYGRGP+Q+S NYNYGPAGRAIG D L +P VA DA VAFK A+WFWM +
Sbjct: 426 QWPCAPGKRYYGRGPIQLSHNYNYGPAGRAIGVDLLANPDLVATDATVAFKTAIWFWMTA 605
Score = 62.0 bits (129), Expect(4) = 7e-042
Identities = 24/46 (52%), Positives = 30/46 (65%)
Frame = +1 / +3
Query: 358 CEGKNFYTRSAFLSAVKAYPGFAHGGSQVQGKREIAAFFAHATHET 495
C+ K FYT AF++A A+PGF GS KRE+AAF A +HET
Sbjct: 189 CQAKGFYTYDAFVAAASAFPGFGSTGSADAQKREVAAFLAQTSHET 326
Score = 27.2 bits (53), Expect(4) = 7e-042
Identities = 9/15 (60%), Positives = 10/15 (66%)
Frame = +1 / +3
Query: 760 GFGATTRAINGALEC 804
GFG T ING +EC
Sbjct: 690 GFGVITNIINGGIEC 734
Score = 22.1 bits (42), Expect(4) = 7e-042
Identities = 7/17 (41%), Positives = 10/17 (58%)
Frame = +1 / +3
Query: 502 FCYISEINKSNAYCDPS 552
+C+ E S+ YC PS
Sbjct: 372 YCFKQERGASSDYCTPS 422
>gb|BG415203.1|BG415203 HVSMEk0005I16f Hordeum vulgare testa/pericarp EST library
HVcDNA0013 (normal) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEk0005I16f, mRNA sequence
Length = 908
Score = 116 bits (247), Expect(4) = 1e-041
Identities = 42/60 (70%), Positives = 49/60 (81%)
Frame = +1 / +2
Query: 559 QWPCAAGQKYYGRGPLQISWNYNYGPAGRAIGFDGLGDPGRVARDAVVAFKAALWFWMNS 738
QWPCA G++YYGRGP+Q+S NYNYGPAGRAIG D L +P VA DA VAFK A+WFWM +
Sbjct: 158 QWPCAPGKRYYGRGPIQLSHNYNYGPAGRAIGVDLLANPDLVATDATVAFKTAIWFWMTA 337
Score = 60.2 bits (125), Expect(4) = 1e-041
Identities = 22/47 (46%), Positives = 30/47 (63%)
Frame = +1 / +2
Query: 760 GFGATTRAINGALECGGNNPAQMNARVGYYRQYCRQLGVDPGPNLTC 900
GFG T ING +ECG +++ R+G+Y++YC LGV G NL C
Sbjct: 422 GFGVITNIINGGIECGHGQDSRVADRIGFYKRYCDILGVGYGNNLDC 562
Score = 28.1 bits (55), Expect(4) = 1e-041
Identities = 10/15 (66%), Positives = 12/15 (80%)
Frame = +1 / +2
Query: 451 KREIAAFFAHATHET 495
KRE+AAF A +HET
Sbjct: 14 KREVAAFLAQTSHET 58
Score = 22.1 bits (42), Expect(4) = 1e-041
Identities = 7/17 (41%), Positives = 10/17 (58%)
Frame = +1 / +2
Query: 502 FCYISEINKSNAYCDPS 552
+C+ E S+ YC PS
Sbjct: 104 YCFKQERGASSDYCTPS 154
>gb|BF627814.2|BF627814 HVSMEb0005N23f Hordeum vulgare seedling shoot EST library
HVcDNA0002 (Dehydration stress) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEb0005N23f, mRNA sequence
Length = 751
Score = 91.8 bits (194), Expect(4) = 5e-041
Identities = 35/57 (61%), Positives = 40/57 (70%)
Frame = +1 / +3
Query: 355 GCEGKNFYTRSAFLSAVKAYPGFAHGGSQVQGKREIAAFFAHATHETGHFCYISEIN 525
GC GK+FYTR +FL +A P F G + GKREIAAFFAH T ETGH CYI EI+
Sbjct: 309 GCPGKSFYTRQSFLDGAQANPDFGKGSTSDDGKREIAAFFAHVTQETGHMCYIEEID 479
Score = 66.6 bits (139), Expect(3) = 2e-023
Identities = 31/53 (58%), Positives = 34/53 (64%)
Frame = -3 / -1
Query: 512 M*QKCPVSCVACAKKAAISRLPCTCDPPWAKPGYALTALRNALRV*KFLPSHP 354
M* CPVSCV AKKAAIS LP + P+ K G+A RN RV*K LP HP
Sbjct: 466 M*HMCPVSCVTWAKKAAISLLPSSLVLPFPKSGFAWAPSRNDWRV*KLLPGHP 308
Score = 52.8 bits (109), Expect(4) = 5e-041
Identities = 19/27 (70%), Positives = 23/27 (85%)
Frame = +3 / +2
Query: 120 SLLCAVAGPAAAQNCGCQPNVCCSKFG 200
+L+ + AG AAAQNCGCQPN CCSK+G
Sbjct: 83 ALVLSGAGLAAAQNCGCQPNECCSKYG 163
Score = 51.0 bits (105), Expect(4) = 5e-041
Identities = 16/38 (42%), Positives = 25/38 (65%)
Frame = +1 / +3
Query: 529 SNAYCDPSKRQWPCAAGQKYYGRGPLQISWNYNYGPAG 642
++ YC+ + QWPC+ G+ YGRGP+ ++WN G G
Sbjct: 495 ASEYCNTNYPQWPCSQGKGDYGRGPVHLTWNSTRGGRG 608
Score = 47.8 bits (98), Expect(3) = 2e-023
Identities = 18/26 (69%), Positives = 20/26 (76%)
Frame = -1 / -2
Query: 199 PNLLQQTFGWQPQFCAAAGPATAQRS 122
P LLQ +FGWQPQFCAAA PA + S
Sbjct: 162 PYLLQHSFGWQPQFCAAASPAPDRTS 85
Score = 37.3 bits (75), Expect(3) = 2e-023
Identities = 15/28 (53%), Positives = 17/28 (60%)
Frame = -3 / -1
Query: 641 PAGP*L*FHEICSGPRP*YFCPAAHGHC 558
P P + FH C+GPRP* P HGHC
Sbjct: 607 PRPPRVEFHVRCTGPRP*SPFPWEHGHC 524
Score = 29.0 bits (57), Expect(4) = 5e-041
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = +3 / +3
Query: 198 GYCGTTDEYCGDGCQSGP 251
G GT YCG C SGP
Sbjct: 162 GSGGTNSSYCGTDCASGP 215
>gb|BE454366.3|BE454366 HVSMEh0093N17f Hordeum vulgare 5-45 DAP spike EST library
HVcDNA0009 (5 to 45 DAP) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEh0093N17f, mRNA sequence
Length = 968
Score = 111 bits (236), Expect(3) = 2e-040
Identities = 41/60 (68%), Positives = 48/60 (80%)
Frame = +1 / +3
Query: 559 QWPCAAGQKYYGRGPLQISWNYNYGPAGRAIGFDGLGDPGRVARDAVVAFKAALWFWMNS 738
QWPCA G++YYGRGP+Q+S N NYGPAGRAIG D L +P VA DA VAFK A+WFWM +
Sbjct: 444 QWPCAPGKRYYGRGPIQLSHN*NYGPAGRAIGVDLLANPDLVATDATVAFKTAIWFWMTA 623
Score = 62.0 bits (129), Expect(3) = 2e-040
Identities = 24/46 (52%), Positives = 30/46 (65%)
Frame = +1 / +3
Query: 358 CEGKNFYTRSAFLSAVKAYPGFAHGGSQVQGKREIAAFFAHATHET 495
C+ K FYT AF++A A+PGF GS KRE+AAF A +HET
Sbjct: 198 CQAKGFYTYDAFVAAASAFPGFGSTGSADAQKREVAAFLAQTSHET 335
Score = 31.8 bits (63), Expect(3) = 2e-040
Identities = 13/39 (33%), Positives = 20/39 (51%)
Frame = +1 / +1
Query: 760 GFGATTRAINGALECGGNNPAQMNARVGYYRQYCRQLGV 876
GFG T ING ++CG + G+Y++ LG+
Sbjct: 709 GFGVITHIINGGIQCGHRPRNRFXHPNGFYKRLWDFLGL 825
>gb|BQ465942.1|BQ465942 HT01C02T HT Hordeum vulgare subsp. vulgare cDNA clone HT01C02
5-PRIME, mRNA sequence
Length = 642
Score = 116 bits (247), Expect(3) = 1e-039
Identities = 42/60 (70%), Positives = 49/60 (81%)
Frame = +1 / +1
Query: 559 QWPCAAGQKYYGRGPLQISWNYNYGPAGRAIGFDGLGDPGRVARDAVVAFKAALWFWMNS 738
QWPCA G++YYGRGP+Q+S NYNYGPAGRAIG D L +P VA DA VAFK A+WFWM +
Sbjct: 73 QWPCAPGKRYYGRGPIQLSHNYNYGPAGRAIGVDLLANPDLVATDATVAFKTAIWFWMTA 252
Score = 60.2 bits (125), Expect(3) = 1e-039
Identities = 22/47 (46%), Positives = 30/47 (63%)
Frame = +1 / +1
Query: 760 GFGATTRAINGALECGGNNPAQMNARVGYYRQYCRQLGVDPGPNLTC 900
GFG T ING +ECG +++ R+G+Y++YC LGV G NL C
Sbjct: 337 GFGVITNIINGGIECGHGQDSRVADRIGFYKRYCDILGVGYGNNLDC 477
Score = 26.3 bits (51), Expect(3) = 1e-039
Identities = 9/22 (40%), Positives = 12/22 (54%)
Frame = +1 / +1
Query: 487 HETGHFCYISEINKSNAYCDPS 552
HE +C+ E S+ YC PS
Sbjct: 4 HEAWGYCFKQERGASSDYCTPS 69
>gb|BG369588.2|BG369588 HVSMEi0025B12f Hordeum vulgare 20 DAP spike EST library HVcDNA0010
(20 DAP) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEi0025B12f, mRNA sequence
Length = 691
Score = 116 bits (247), Expect(2) = 4e-039
Identities = 42/60 (70%), Positives = 49/60 (81%)
Frame = +1 / +3
Query: 559 QWPCAAGQKYYGRGPLQISWNYNYGPAGRAIGFDGLGDPGRVARDAVVAFKAALWFWMNS 738
QWPCA G++YYGRGP+Q+S NYNYGPAGRAIG D L +P VA DA VAFK A+WFWM +
Sbjct: 426 QWPCAPGKRYYGRGPIQLSHNYNYGPAGRAIGVDLLANPDLVATDATVAFKTAIWFWMTA 605
Score = 66.1 bits (138), Expect(2) = 4e-039
Identities = 26/58 (44%), Positives = 36/58 (62%)
Frame = +1 / +3
Query: 322 FFNGIKNQAGSGCEGKNFYTRSAFLSAVKAYPGFAHGGSQVQGKREIAAFFAHATHET 495
F+ + ++ S C+ K FYT AF++A A+PGF GS KRE+AAF A +HET
Sbjct: 153 FYRMLLHRNDSACQAKGFYTYDAFVAAASAFPGFGSTGSADAHKREVAAFLAQTSHET 326
>gb|BG414551.2|BG414551 HVSMEk0002N14f Hordeum vulgare testa/pericarp EST library
HVcDNA0013 (normal) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEk0002N14f, mRNA sequence
Length = 805
Score = 116 bits (247), Expect(3) = 5e-039
Identities = 42/60 (70%), Positives = 49/60 (81%)
Frame = +1 / +2
Query: 559 QWPCAAGQKYYGRGPLQISWNYNYGPAGRAIGFDGLGDPGRVARDAVVAFKAALWFWMNS 738
QWPCA G++YYGRGP+Q+S NYNYGPAGRAIG D L +P VA DA VAFK A+WFWM +
Sbjct: 434 QWPCAPGKRYYGRGPIQLSHNYNYGPAGRAIGVDLLANPDLVATDATVAFKTAIWFWMTA 613
Score = 62.0 bits (129), Expect(3) = 5e-039
Identities = 24/46 (52%), Positives = 30/46 (65%)
Frame = +1 / +2
Query: 358 CEGKNFYTRSAFLSAVKAYPGFAHGGSQVQGKREIAAFFAHATHET 495
C+ K FYT AF++A A+PGF GS KRE+AAF A +HET
Sbjct: 197 CQAKGFYTYDAFVAAASAFPGFGSTGSADAQKREVAAFLAQTSHET 334
Score = 22.1 bits (42), Expect(3) = 5e-039
Identities = 7/17 (41%), Positives = 10/17 (58%)
Frame = +1 / +2
Query: 502 FCYISEINKSNAYCDPS 552
+C+ E S+ YC PS
Sbjct: 380 YCFKQERGASSDYCTPS 430
>gb|BG366386.2|BG366386 HVSMEi0006N24f Hordeum vulgare 20 DAP spike EST library HVcDNA0010
(20 DAP) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEi0006N24f, mRNA sequence
Length = 710
Score = 116 bits (247), Expect(3) = 5e-039
Identities = 42/60 (70%), Positives = 49/60 (81%)
Frame = +1 / +3
Query: 559 QWPCAAGQKYYGRGPLQISWNYNYGPAGRAIGFDGLGDPGRVARDAVVAFKAALWFWMNS 738
QWPCA G++YYGRGP+Q+S NYNYGPAGRAIG D L +P VA DA VAFK A+WFWM +
Sbjct: 429 QWPCAPGKRYYGRGPIQLSHNYNYGPAGRAIGVDLLANPDLVATDATVAFKTAIWFWMTA 608
Score = 62.0 bits (129), Expect(3) = 5e-039
Identities = 24/46 (52%), Positives = 30/46 (65%)
Frame = +1 / +3
Query: 358 CEGKNFYTRSAFLSAVKAYPGFAHGGSQVQGKREIAAFFAHATHET 495
C+ K FYT AF++A A+PGF GS KRE+AAF A +HET
Sbjct: 192 CQAKGFYTYDAFVAAASAFPGFGSTGSADAQKREVAAFLAQTSHET 329
Score = 22.1 bits (42), Expect(3) = 5e-039
Identities = 7/17 (41%), Positives = 10/17 (58%)
Frame = +1 / +3
Query: 502 FCYISEINKSNAYCDPS 552
+C+ E S+ YC PS
Sbjct: 375 YCFKQERGASSDYCTPS 425
>gb|BG416746.1|BG416746 HVSMEk0014F08f Hordeum vulgare testa/pericarp EST library
HVcDNA0013 (normal) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEk0014F08f, mRNA sequence
Length = 682
Score = 116 bits (247), Expect(3) = 5e-039
Identities = 42/60 (70%), Positives = 49/60 (81%)
Frame = +1 / +1
Query: 559 QWPCAAGQKYYGRGPLQISWNYNYGPAGRAIGFDGLGDPGRVARDAVVAFKAALWFWMNS 738
QWPCA G++YYGRGP+Q+S NYNYGPAGRAIG D L +P VA DA VAFK A+WFWM +
Sbjct: 358 QWPCAPGKRYYGRGPIQLSHNYNYGPAGRAIGVDLLANPDLVATDATVAFKTAIWFWMTA 537
Score = 62.0 bits (129), Expect(3) = 5e-039
Identities = 24/46 (52%), Positives = 30/46 (65%)
Frame = +1 / +1
Query: 358 CEGKNFYTRSAFLSAVKAYPGFAHGGSQVQGKREIAAFFAHATHET 495
C+ K FYT AF++A A+PGF GS KRE+AAF A +HET
Sbjct: 121 CQAKGFYTYDAFVAAASAFPGFGSTGSADAQKREVAAFLAQTSHET 258
Score = 22.1 bits (42), Expect(3) = 5e-039
Identities = 7/17 (41%), Positives = 10/17 (58%)
Frame = +1 / +1
Query: 502 FCYISEINKSNAYCDPS 552
+C+ E S+ YC PS
Sbjct: 304 YCFKQERGASSDYCTPS 354
>gb|CA014196.1|CA014196 HT10K16r HT Hordeum vulgare subsp. vulgare cDNA clone HT10K16
5-PRIME, mRNA sequence
Length = 670
Score = 116 bits (247), Expect(3) = 9e-039
Identities = 42/60 (70%), Positives = 49/60 (81%)
Frame = +1 / +3
Query: 559 QWPCAAGQKYYGRGPLQISWNYNYGPAGRAIGFDGLGDPGRVARDAVVAFKAALWFWMNS 738
QWPCA G++YYGRGP+Q+S NYNYGPAGRAIG D L +P VA DA VAFK A+WFWM +
Sbjct: 441 QWPCAPGKRYYGRGPIQLSHNYNYGPAGRAIGVDLLANPDLVATDATVAFKTAIWFWMTA 620
Score = 61.1 bits (127), Expect(3) = 9e-039
Identities = 24/46 (52%), Positives = 30/46 (65%)
Frame = +1 / +3
Query: 358 CEGKNFYTRSAFLSAVKAYPGFAHGGSQVQGKREIAAFFAHATHET 495
C+ K FYT AF++A A+PGF GS KRE+AAF A +HET
Sbjct: 204 CQAKGFYTYDAFVAAAAAFPGFGTTGSADAQKREVAAFLAQTSHET 341
Score = 22.1 bits (42), Expect(3) = 9e-039
Identities = 7/17 (41%), Positives = 10/17 (58%)
Frame = +1 / +3
Query: 502 FCYISEINKSNAYCDPS 552
+C+ E S+ YC PS
Sbjct: 387 YCFKQERGASSDYCTPS 437
>gb|BM441867.2|BM441867 EBed07_SQ001_M10_R endosperm, 28 DPA, no treatment, cv Optic,
EBed07 Hordeum vulgare subsp. vulgare cDNA clone
EBed07_SQ001_M10 5', mRNA sequence
Length = 646
Score = 116 bits (247), Expect(3) = 9e-039
Identities = 42/60 (70%), Positives = 49/60 (81%)
Frame = +1 / +3
Query: 559 QWPCAAGQKYYGRGPLQISWNYNYGPAGRAIGFDGLGDPGRVARDAVVAFKAALWFWMNS 738
QWPCA G++YYGRGP+Q+S NYNYGPAGRAIG D L +P VA DA VAFK A+WFWM +
Sbjct: 414 QWPCAPGKRYYGRGPIQLSHNYNYGPAGRAIGVDLLANPDLVATDATVAFKTAIWFWMTA 593
Score = 61.1 bits (127), Expect(3) = 9e-039
Identities = 24/46 (52%), Positives = 30/46 (65%)
Frame = +1 / +3
Query: 358 CEGKNFYTRSAFLSAVKAYPGFAHGGSQVQGKREIAAFFAHATHET 495
C+ K FYT AF++A A+PGF GS KRE+AAF A +HET
Sbjct: 177 CQAKGFYTYDAFVAAAAAFPGFGTTGSADAQKREVAAFLAQTSHET 314
Score = 22.1 bits (42), Expect(3) = 9e-039
Identities = 7/17 (41%), Positives = 10/17 (58%)
Frame = +1 / +3
Query: 502 FCYISEINKSNAYCDPS 552
+C+ E S+ YC PS
Sbjct: 360 YCFKQERGASSDYCTPS 410
>gb|BM371924.2|BM371924 EBma08_SQ004_G15_R maternal, 28 DPA, no treatment, cv Optic, EBma08
Hordeum vulgare subsp. vulgare cDNA clone
EBma08_SQ004_G15 5', mRNA sequence
Length = 552
Score = 116 bits (247), Expect(3) = 9e-039
Identities = 42/60 (70%), Positives = 49/60 (81%)
Frame = +1 / +2
Query: 559 QWPCAAGQKYYGRGPLQISWNYNYGPAGRAIGFDGLGDPGRVARDAVVAFKAALWFWMNS 738
QWPCA G++YYGRGP+Q+S NYNYGPAGRAIG D L +P VA DA VAFK A+WFWM +
Sbjct: 275 QWPCAPGKRYYGRGPIQLSHNYNYGPAGRAIGVDLLANPDLVATDATVAFKTAIWFWMTA 454
Score = 61.1 bits (127), Expect(3) = 9e-039
Identities = 24/46 (52%), Positives = 30/46 (65%)
Frame = +1 / +2
Query: 358 CEGKNFYTRSAFLSAVKAYPGFAHGGSQVQGKREIAAFFAHATHET 495
C+ K FYT AF++A A+PGF GS KRE+AAF A +HET
Sbjct: 38 CQAKGFYTYDAFVAAAAAFPGFGTTGSADAQKREVAAFLAQTSHET 175
Score = 22.1 bits (42), Expect(3) = 9e-039
Identities = 7/17 (41%), Positives = 10/17 (58%)
Frame = +1 / +2
Query: 502 FCYISEINKSNAYCDPS 552
+C+ E S+ YC PS
Sbjct: 221 YCFKQERGASSDYCTPS 271
>gb|BI780034.2|BI780034 EBma08_SQ001_D14_R maternal, 28 DPA, no treatment, cv Optic, EBma08
Hordeum vulgare subsp. vulgare cDNA clone
EBma08_SQ001_D14 5', mRNA sequence
Length = 647
Score = 116 bits (247), Expect(3) = 2e-038
Identities = 42/60 (70%), Positives = 49/60 (81%)
Frame = +1 / +1
Query: 559 QWPCAAGQKYYGRGPLQISWNYNYGPAGRAIGFDGLGDPGRVARDAVVAFKAALWFWMNS 738
QWPCA G++YYGRGP+Q+S NYNYGPAGRAIG D L +P VA DA VAFK A+WFWM +
Sbjct: 88 QWPCAPGKRYYGRGPIQLSHNYNYGPAGRAIGVDLLANPDLVATDATVAFKTAIWFWMTA 267
Score = 60.2 bits (125), Expect(3) = 2e-038
Identities = 22/47 (46%), Positives = 30/47 (63%)
Frame = +1 / +1
Query: 760 GFGATTRAINGALECGGNNPAQMNARVGYYRQYCRQLGVDPGPNLTC 900
GFG T ING +ECG +++ R+G+Y++YC LGV G NL C
Sbjct: 352 GFGVITNIINGGIECGHGQDSRVADRIGFYKRYCDILGVGYGNNLDC 492
Score = 22.1 bits (42), Expect(3) = 2e-038
Identities = 7/17 (41%), Positives = 10/17 (58%)
Frame = +1 / +1
Query: 502 FCYISEINKSNAYCDPS 552
+C+ E S+ YC PS
Sbjct: 34 YCFKQERGASSDYCTPS 84
>gb|CA013166.1|CA013166 HT07J12r HT Hordeum vulgare subsp. vulgare cDNA clone HT07J12
5-PRIME, mRNA sequence
Length = 639
Score = 110 bits (235), Expect(3) = 2e-038
Identities = 40/60 (66%), Positives = 47/60 (78%)
Frame = +1 / +3
Query: 559 QWPCAAGQKYYGRGPLQISWNYNYGPAGRAIGFDGLGDPGRVARDAVVAFKAALWFWMNS 738
QWPCA G+ YYGRGP+Q+S NYNYGPAGRAIG D L +P VA D V+FK A+WFWM +
Sbjct: 183 QWPCAPGKSYYGRGPIQLSHNYNYGPAGRAIGVDLLRNPDLVATDPTVSFKTAMWFWMTA 362
Score = 59.7 bits (124), Expect(3) = 2e-038
Identities = 21/47 (44%), Positives = 30/47 (63%)
Frame = +1 / +3
Query: 760 GFGATTRAINGALECGGNNPAQMNARVGYYRQYCRQLGVDPGPNLTC 900
GFG T +NG +ECG +++ R+G+Y++YC LGV G NL C
Sbjct: 447 GFGVITNIVNGGIECGHGQDSRVADRIGFYKRYCDILGVGYGNNLDC 587
Score = 28.1 bits (55), Expect(3) = 2e-038
Identities = 10/15 (66%), Positives = 12/15 (80%)
Frame = +1 / +3
Query: 451 KREIAAFFAHATHET 495
KRE+AAF A +HET
Sbjct: 39 KREVAAFLAQTSHET 83
>gb|BQ466541.1|BQ466541 HT02N08r HT Hordeum vulgare subsp. vulgare cDNA clone HT02N08
5-PRIME, mRNA sequence
Length = 536
Score = 116 bits (247), Expect(3) = 2e-038
Identities = 42/60 (70%), Positives = 49/60 (81%)
Frame = +1 / +2
Query: 559 QWPCAAGQKYYGRGPLQISWNYNYGPAGRAIGFDGLGDPGRVARDAVVAFKAALWFWMNS 738
QWPCA G++YYGRGP+Q+S NYNYGPAGRAIG D L +P VA DA VAFK A+WFWM +
Sbjct: 83 QWPCAPGKRYYGRGPIQLSHNYNYGPAGRAIGVDLLANPDLVATDATVAFKTAIWFWMTA 262
Score = 60.2 bits (125), Expect(3) = 2e-038
Identities = 22/47 (46%), Positives = 30/47 (63%)
Frame = +1 / +2
Query: 760 GFGATTRAINGALECGGNNPAQMNARVGYYRQYCRQLGVDPGPNLTC 900
GFG T ING +ECG +++ R+G+Y++YC LGV G NL C
Sbjct: 347 GFGVITNIINGGIECGHGQDSRVADRIGFYKRYCDILGVGYGNNLDC 487
Score = 22.1 bits (42), Expect(3) = 2e-038
Identities = 7/17 (41%), Positives = 10/17 (58%)
Frame = +1 / +2
Query: 502 FCYISEINKSNAYCDPS 552
+C+ E S+ YC PS
Sbjct: 29 YCFKQERGASSDYCTPS 79
>gb|AL499683.1|AL499683 AL499683 Hordeum vulgare Barke etiolated leaves Hordeum vulgare
subsp. vulgare cDNA clone HK01K20r 3', mRNA sequence
Length = 652
Score = 91.3 bits (193), Expect(3) = 2e-038
Identities = 34/50 (68%), Positives = 40/50 (80%)
Frame = +1 / +2
Query: 562 WPCAAGQKYYGRGPLQISWNYNYGPAGRAIGFDGLGDPGRVARDAVVAFK 711
WPCA G++YYGRGP+Q++ NYNYGPAGRAIG D L +P VA D VAFK
Sbjct: 467 WPCAPGKQYYGRGPIQLTHNYNYGPAGRAIGVDLLNNPDLVASDPTVAFK 616
Score = 54.7 bits (113), Expect(3) = 2e-038
Identities = 22/48 (45%), Positives = 28/48 (58%)
Frame = +1 / +2
Query: 352 SGCEGKNFYTRSAFLSAVKAYPGFAHGGSQVQGKREIAAFFAHATHET 495
+ C + FYT AFL+A A+P F G KRE+AAFF +HET
Sbjct: 221 AACLARGFYTYDAFLAAAGAFPAFGTTGDLDTRKREVAAFFGQTSHET 364
Score = 51.9 bits (107), Expect(3) = 2e-038
Identities = 16/26 (61%), Positives = 20/26 (76%)
Frame = +3 / +2
Query: 168 CQPNVCCSKFGYCGTTDEYCGDGCQS 245
C +CCS+FG+CG+T YCG GCQS
Sbjct: 53 CANCMCCSQFGFCGSTSAYCGGGCQS 130
>gb|BE455238.3|BE455238 HVSMEh0096L08f Hordeum vulgare 5-45 DAP spike EST library
HVcDNA0009 (5 to 45 DAP) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEh0096L08f, mRNA sequence
Length = 710
Score = 112 bits (240), Expect(3) = 4e-038
Identities = 41/60 (68%), Positives = 48/60 (80%)
Frame = +1 / +3
Query: 559 QWPCAAGQKYYGRGPLQISWNYNYGPAGRAIGFDGLGDPGRVARDAVVAFKAALWFWMNS 738
QWPCA G++YYGRGP+Q+S NYNYGPAGRAIG D L +P VA DA VA K A+WFWM +
Sbjct: 429 QWPCAPGKRYYGRGPIQLSHNYNYGPAGRAIGVDLLANPDLVATDATVAVKTAIWFWMTA 608
Score = 62.0 bits (129), Expect(3) = 4e-038
Identities = 24/46 (52%), Positives = 30/46 (65%)
Frame = +1 / +3
Query: 358 CEGKNFYTRSAFLSAVKAYPGFAHGGSQVQGKREIAAFFAHATHET 495
C+ K FYT AF++A A+PGF GS KRE+AAF A +HET
Sbjct: 192 CQAKGFYTYDAFVAAASAFPGFGSTGSADAQKREVAAFLAQTSHET 329
Score = 22.1 bits (42), Expect(3) = 4e-038
Identities = 7/17 (41%), Positives = 10/17 (58%)
Frame = +1 / +3
Query: 502 FCYISEINKSNAYCDPS 552
+C+ E S+ YC PS
Sbjct: 375 YCFKQERGASSDYCTPS 425
>gb|BE454492.3|BE454492 HVSMEh0094A02f Hordeum vulgare 5-45 DAP spike EST library
HVcDNA0009 (5 to 45 DAP) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEh0094A02f, mRNA sequence
Length = 688
Score = 116 bits (247), Expect(3) = 6e-038
Identities = 42/60 (70%), Positives = 49/60 (81%)
Frame = +1 / +3
Query: 559 QWPCAAGQKYYGRGPLQISWNYNYGPAGRAIGFDGLGDPGRVARDAVVAFKAALWFWMNS 738
QWPCA G++YYGRGP+Q+S NYNYGPAGRAIG D L +P VA DA VAFK A+WFWM +
Sbjct: 78 QWPCAPGKRYYGRGPIQLSHNYNYGPAGRAIGVDLLANPDLVATDATVAFKTAIWFWMTA 257
Score = 58.3 bits (121), Expect(3) = 6e-038
Identities = 21/47 (44%), Positives = 30/47 (63%)
Frame = +1 / +3
Query: 760 GFGATTRAINGALECGGNNPAQMNARVGYYRQYCRQLGVDPGPNLTC 900
GFG T ING +ECG +++ R+G+Y++YC LGV G +L C
Sbjct: 342 GFGVITNIINGGIECGHGQDSRVADRIGFYKRYCDILGVGYGKHLDC 482
Score = 22.1 bits (42), Expect(3) = 6e-038
Identities = 7/17 (41%), Positives = 10/17 (58%)
Frame = +1 / +3
Query: 502 FCYISEINKSNAYCDPS 552
+C+ E S+ YC PS
Sbjct: 24 YCFKQERGASSDYCTPS 74
>gb|BI780179.2|BI780179 EBma08_SQ001_K01_R maternal, 28 DPA, no treatment, cv Optic, EBma08
Hordeum vulgare subsp. vulgare cDNA clone
EBma08_SQ001_K01 5', mRNA sequence
Length = 604
Score = 113 bits (241), Expect(3) = 6e-038
Identities = 41/58 (70%), Positives = 48/58 (82%)
Frame = +1 / +1
Query: 559 QWPCAAGQKYYGRGPLQISWNYNYGPAGRAIGFDGLGDPGRVARDAVVAFKAALWFWM 732
QWPCA G++YYGRGP+Q+S NY+YGPAGRAIG D L +P VA DA VAFK A+WFWM
Sbjct: 430 QWPCAPGKRYYGRGPIQLSHNYDYGPAGRAIGVDLLANPDLVATDATVAFKTAIWFWM 603
Score = 61.1 bits (127), Expect(3) = 6e-038
Identities = 24/46 (52%), Positives = 30/46 (65%)
Frame = +1 / +1
Query: 358 CEGKNFYTRSAFLSAVKAYPGFAHGGSQVQGKREIAAFFAHATHET 495
C+ K FYT AF++A A+PGF GS KRE+AAF A +HET
Sbjct: 193 CQAKGFYTYDAFVAAAAAFPGFGTTGSADAQKREVAAFLAQTSHET 330
Score = 22.1 bits (42), Expect(3) = 6e-038
Identities = 7/17 (41%), Positives = 10/17 (58%)
Frame = +1 / +1
Query: 502 FCYISEINKSNAYCDPS 552
+C+ E S+ YC PS
Sbjct: 376 YCFKQERGASSDYCTPS 426
Database: Hordeum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:16 PM
Number of letters in database: 175,134,539
Number of sequences in database: 312,970
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 419,592,686
Number of Sequences: 312970
Number of extensions: 6920425
Number of successful extensions: 89305
Number of sequences better than 1.0e-020: 263
length of database: 58,378,179
effective HSP length: 53
effective length of database: 41,790,769
effective search space used: 14250652229
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)