TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 1805139.2.1
(950 letters)
Database: Hordeum_nucl_with_EST.fasta
312,970 sequences; 175,134,539 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BQ460388.1|BQ460388 HA09M17r HA Hordeum vulgare subsp. v... 459 e-128
gb|BQ464047.1|BQ464047 HF01D07T HF Hordeum vulgare subsp. v... 459 e-128
gb|BQ764615.1|BQ764615 EBca01_SQ004_K11_R carpel, pre-anthe... 389 e-128
gb|BM376791.2|BM376791 EBem05_SQ003_E02_R embryo, 14 DPA, n... 456 e-128
gb|BJ463425.1|BJ463425 BJ463425 K. Sato unpublished cDNA li... 450 e-126
gb|AL506237.1|AL506237 AL506237 Hordeum vulgare Barke devel... 450 e-126
gb|BU997945.1|BU997945 HI09I01r HI Hordeum vulgare subsp. v... 448 e-125
gb|BM373914.2|BM373914 EBma03_SQ003_B17_R maternal, 8 DPA, ... 346 e-121
gb|AW982205.2|AW982205 HVSMEg0002E10f Hordeum vulgare pre-a... 408 e-118
gb|AV919448.1|AV919448 AV919448 K. Sato unpublished cDNA li... 399 e-118
gb|BQ471999.1|BQ471999 HV04C01r HV Hordeum vulgare subsp. v... 417 e-116
gb|AV918472.1|AV918472 AV918472 K. Sato unpublished cDNA li... 391 e-111
gb|BJ465856.1|BJ465856 BJ465856 K. Sato unpublished cDNA li... 381 e-108
gb|AV913180.1|AV913180 AV913180 K. Sato unpublished cDNA li... 377 e-107
gb|BM376958.2|BM376958 EBem05_SQ003_L10_R embryo, 14 DPA, n... 381 e-105
gb|BU988629.1|BU988629 HF18D11r HF Hordeum vulgare subsp. v... 366 e-100
gb|CA027891.1|CA027891 HZ60F17r HZ Hordeum vulgare subsp. v... 346 1e-094
gb|AV914412.1|AV914412 AV914412 K. Sato unpublished cDNA li... 268 5e-083
gb|CB859146.1|CB859146 HI09I01w HI Hordeum vulgare subsp. v... 293 6e-082
gb|BU988248.1|BU988248 HF17B16r HF Hordeum vulgare subsp. v... 280 8e-075
gb|BQ657073.1|BQ657073 HA09M17u HA Hordeum vulgare subsp. v... 263 1e-074
gb|AJ462919.1|AJ462919 AJ462919 S00002 Hordeum vulgare subs... 279 1e-074
gb|CK125568.1|CK125568 BES1824109b06 BES1824 Hordeum vulgar... 144 6e-068
gb|BQ765063.1|BQ765063 EBca01_SQ005_N18_R carpel, pre-anthe... 144 6e-068
gb|CK123865.1|CK123865 BES1824105n21 BES1824 Hordeum vulgar... 144 8e-068
gb|CA025095.1|CA025095 HZ51D05r HZ Hordeum vulgare subsp. v... 144 8e-068
gb|AL505296.1|AL505296 AL505296 Hordeum vulgare Barke roots... 141 5e-067
gb|AV926936.1|AV926936 AV926936 K. Sato unpublished cDNA li... 144 1e-063
gb|BJ463541.1|BJ463541 BJ463541 K. Sato unpublished cDNA li... 133 1e-062
gb|BI950605.1|BI950605 HVSMEl0021J24f Hordeum vulgare spike... 142 2e-062
gb|BG300145.1|BG300145 HVSMEb0010G24f Hordeum vulgare seedl... 137 6e-062
gb|BM369644.2|BM369644 EBem07_SQ004_D10_R embryo, 28 DPA, n... 135 6e-061
gb|BM442006.2|BM442006 EBan01_SQ001_K04_R anther, yellow st... 133 8e-061
gb|BQ753427.1|BQ753427 EBan01_SQ004_D21_R anther, yellow st... 129 3e-059
gb|BI950704.1|BI950704 HVSMEl0022M04f Hordeum vulgare spike... 227 8e-059
gb|BQ753289.1|BQ753289 EBan01_SQ001_D10_R anther, yellow st... 133 9e-059
gb|CA032315.1|CA032315 HX12K14r HX Hordeum vulgare subsp. v... 144 8e-058
gb|BM377129.2|BM377129 EBem05_SQ004_D11_R embryo, 14 DPA, n... 144 3e-056
gb|BM372397.2|BM372397 EBro03_SQ004_N12_R root, 3 week, wat... 133 3e-055
gb|BQ764354.1|BQ764354 EBan01_SQ005_I18_R anther, yellow st... 133 4e-054
gb|BM442464.2|BM442464 EBan01_SQ003_E04_R anther, yellow st... 129 8e-051
gb|BQ664619.1|BQ664619 HV04C01u HV Hordeum vulgare subsp. v... 179 9e-050
gb|BJ476245.1|BJ476245 BJ476245 K. Sato unpublished cDNA li... 133 1e-049
gb|BQ469637.1|BQ469637 HZ01G16r HZ Hordeum vulgare subsp. v... 144 3e-049
gb|BU996702.1|BU996702 HM14H14r HM Hordeum vulgare subsp. v... 144 2e-048
gb|AL505692.1|AL505692 AL505692 Hordeum vulgare Barke roots... 144 5e-047
gb|BE216049.2|BE216049 HV_CEb0009E03f Hordeum vulgare seedl... 133 3e-046
gb|BM373658.2|BM373658 EBma03_SQ002_E03_R maternal, 8 DPA, ... 183 1e-045
gb|AJ460964.1|AJ460964 AJ460964 S00002 Hordeum vulgare subs... 183 1e-045
gb|BU999728.1|BU999728 HI15I03r HI Hordeum vulgare subsp. v... 144 2e-044
gb|BU977218.1|BU977218 HA11A17r HA Hordeum vulgare subsp. v... 144 2e-041
gb|CA028260.1|CA028260 HZ61H10r HZ Hordeum vulgare subsp. v... 144 2e-041
gb|BI776278.2|BI776278 EBem04_SQ001_F10_R embryo, 12 DPA, n... 133 2e-040
gb|BJ476665.1|BJ476665 BJ476665 K. Sato unpublished cDNA li... 133 4e-040
gb|BQ764551.1|BQ764551 EBca01_SQ004_O06_R carpel, pre-anthe... 133 2e-039
gb|BJ466489.1|BJ466489 BJ466489 K. Sato unpublished cDNA li... 133 2e-039
gb|BM374546.2|BM374546 EBpi03_SQ003_O19_R pistil, 4 DPA, no... 145 6e-039
gb|BU982393.1|BU982393 HA26G16r HA Hordeum vulgare subsp. v... 144 5e-036
gb|AV931773.1|AV931773 AV931773 K. Sato unpublished cDNA li... 133 2e-035
gb|CA017403.1|CA017403 HV05B16r HV Hordeum vulgare subsp. v... 144 2e-035
gb|BF616370.3|BF616370 HVSMEc0007A02f Hordeum vulgare seedl... 144 5e-034
gb|BQ460921.1|BQ460921 HE01M06r HE Hordeum vulgare subsp. v... 144 1e-033
gb|BJ460376.1|BJ460376 BJ460376 K. Sato unpublished cDNA li... 133 3e-033
gb|CA003910.1|CA003910 HS15O21r HS Hordeum vulgare subsp. v... 141 5e-033
gb|BU970112.1|BU970112 HB13K08r BC Hordeum vulgare subsp. v... 140 1e-032
gb|BM817001.1|BM817001 HC05E10_T3.ab1 HC Hordeum vulgare su... 133 1e-030
gb|BJ452829.1|BJ452829 BJ452829 K. Sato unpublished cDNA li... 133 1e-030
gb|BQ765160.1|BQ765160 EBca01_SQ005_P20_R carpel, pre-anthe... 133 1e-030
gb|BQ765444.1|BQ765444 EBro03_SQ007_N05_R root, 3 week, wat... 133 1e-030
gb|BM373611.2|BM373611 EBma03_SQ002_B19_R maternal, 8 DPA, ... 133 2e-030
gb|CA022424.1|CA022424 HZ43C05r HZ Hordeum vulgare subsp. v... 131 5e-030
gb|CB880925.1|CB880925 HM08E02w HM Hordeum vulgare subsp. v... 126 2e-028
gb|AL509654.1|AL509654 AL509654 Hordeum vulgare Barke devel... 110 2e-028
gb|BM442216.2|BM442216 EBan01_SQ002_I23_R anther, yellow st... 122 2e-027
gb|BQ468809.1|BQ468809 HM02G14r HM Hordeum vulgare subsp. v... 122 3e-027
gb|AL502569.1|AL502569 AL502569 Hordeum vulgare Barke roots... 115 5e-025
gb|BQ656974.1|BQ656974 HA01D16u HA Hordeum vulgare subsp. v... 114 9e-025
gb|AJ432815.1|AJ432815 AJ432815 S00002 Hordeum vulgare subs... 111 6e-024
gb|BQ665870.1|BQ665870 HZ01G16u HZ Hordeum vulgare subsp. v... 111 6e-024
gb|BU994803.1|BU994803 HM08E02r HM Hordeum vulgare subsp. v... 86 3e-023
>gb|BQ460388.1|BQ460388 HA09M17r HA Hordeum vulgare subsp. vulgare cDNA clone HA09M17
5-PRIME, mRNA sequence
Length = 635
Score = 459 bits (996), Expect = e-128
Identities = 178/192 (92%), Positives = 183/192 (95%)
Frame = -2 / +2
Query: 877 AMATSFQGTTTKCTACDKTVYLVDKLTADNRIYHKACFRCHHCKGTLKLANYNSFEGVLY 698
AMATSFQGTTTKC ACDKTVYLVDKLTADNR+YHKACFRCHHCKGTLKLANYNSFEGVLY
Sbjct: 59 AMATSFQGTTTKCNACDKTVYLVDKLTADNRVYHKACFRCHHCKGTLKLANYNSFEGVLY 238
Query: 697 CRPHFDQLFKRTGSLDKSFEGTPKVVKPERNVGNENATKVSSAFAGTREKCVGCSKTVYP 518
CRPHFDQLFKRTGSLDKSFEGTPKVVKPERNVGNENA KVSSAFAGTREKC GCSKTVYP
Sbjct: 239 CRPHFDQLFKRTGSLDKSFEGTPKVVKPERNVGNENAIKVSSAFAGTREKCFGCSKTVYP 418
Query: 517 TERVTVNNTMYHKSCFKCCHGGCTISPSNYIAHEGKLYCKHHHIQLIKEKGNFSQLENDH 338
ERVTVNNTMYHKSCFKCCHGGCTISPSNYIAHEGKL+CKHHH QLIKEKGNFSQLENDH
Sbjct: 419 IERVTVNNTMYHKSCFKCCHGGCTISPSNYIAHEGKLFCKHHHTQLIKEKGNFSQLENDH 598
Query: 337 EKTSQAGSLEED 302
+KTSQ+ +D
Sbjct: 599 DKTSQSAGSVDD 634
Score = 319 bits (692), Expect = 1e-086
Identities = 136/186 (73%), Positives = 142/186 (76%)
Frame = +3 / -3
Query: 324 CDVFSWSFSSWLKFPFSLISWMWWCLQYSFPSCAM*LEGLMVHPPWQHLKQLLWYIXXXX 503
CDV S SFSSWLKFPFSLISW+WWCLQ S PS AM* EGLMVHPPWQHLKQLLWY+
Sbjct: 612 CDVLS*SFSSWLKFPFSLISWVWWCLQKSLPSWAM*FEGLMVHPPWQHLKQLLWYMVLLT 433
Query: 504 XXXXXXXXXXXHPTHFSLVPAKALETLVAFSFPTFLSGLTTLGXXXXXXXXXXXXXNSWS 683
HP HFSLVPA ALETL+AFSFPTFLSGLTT G SWS
Sbjct: 432 VTLSIG*TVLLHPKHFSLVPANALETLIAFSFPTFLSGLTTFGVPSKLLSRLPVLLKSWS 253
Query: 684 K*GLQ*STPSKEL*LASLRVPLQWWQRKQALW*MRLSAVSLSTRYTVLSQAVHLVVVPWK 863
K*GLQ*STPS EL* ASLRVPLQWW KQALW* RLSAVSLSTRYTVLSQA+HLVVVPW
Sbjct: 252 K*GLQ*STPSNEL*FASLRVPLQWWHLKQALW*TRLSAVSLSTRYTVLSQALHLVVVPWN 73
Query: 864 EVAMAA 881
EVA+A+
Sbjct: 72 EVAIAS 55
Score = 249 bits (538), Expect(2) = 4e-070
Identities = 103/136 (75%), Positives = 119/136 (87%)
Frame = -1 / +1
Query: 734 ARQLQLLRGSALLQASLRPAVQEDRELGQELRRNSQGCQARKKRWE*ECY*SLKRLCWHQ 555
AR+LQL+R ALLQASL PA+QED E QELRR+S+GCQARK+ WE*ECY*SL+R+CWHQ
Sbjct: 202 ARELQLVRRGALLQASL*PALQEDWEPRQELRRDSKGCQARKECWE*ECY*SLERICWHQ 381
Query: 554 REMCWMQQDSLSN*EGHC**HYVPQELLQVLPWRVHHQPF*LHCARGEAVLQAPPHPADQ 375
REM WMQQDSLSN*EG+C *H+VPQELLQ+LPWRVHHQPF LH RG+A+LQAPPHPADQ
Sbjct: 382 REMFWMQQDSLSN*EGYCQ*HHVPQELLQMLPWRVHHQPFELHRPRGQALLQAPPHPADQ 561
Query: 374 GEGELQPA*E*PREDI 327
EG+ QPA E R+D+
Sbjct: 562 REGKFQPARERSRQDV 609
Score = 178 bits (383), Expect(2) = 3e-047
Identities = 75/94 (79%), Positives = 85/94 (90%)
Frame = +2 / -2
Query: 425 NVVRRADGAPSMAALEAALVVHSVINSDPLSWIDCLAASNTFLSGASKGA*DFSSILIPN 604
+V+RRADGAPSMAA EAALVVH VI+S+PL+WIDCLAAS TFLSGASK A DF+SILIPN
Sbjct: 511 DVIRRADGAPSMAAFEAALVVHGVIDSNPLNWIDCLAASKTFLSGASKCARDFNSILIPN 332
Query: 605 VSFWLDNLGSSFEALVQAPCPLEQLVEVRPAVEH 706
+ FWLDNL S FEALV+AP PLE+LV+VRPAVEH
Sbjct: 331 IPFWLDNLWSPFEALVEAPSPLEELVKVRPAVEH 230
Score = 160 bits (343), Expect = 1e-038
Identities = 77/93 (82%), Positives = 79/93 (84%)
Frame = -3 / +3
Query: 705 CSTAGLTSTSCSRGQGAWTRASKELPRLSSQKETLGMRMLLKSQAPLLAPERNVLDAARQ 526
CSTAGLT TS SRG GA TRASK L RLSSQK LGMRMLLKS+A LLAPERNVLDAARQ
Sbjct: 231 CSTAGLTLTSSSRGLGASTRASKGLQRLSSQKGMLGMRMLLKSRAHLLAPERNVLDAARQ 410
Query: 525 SIQLRGSLLITLCTTRAASSAAMEGAPSALLTT 427
SIQLRG L IT CTTRAAS+AAMEGAPSAL T
Sbjct: 411 SIQLRGLLSITPCTTRAASNAAMEGAPSALRIT 509
Score = 79.0 bits (166), Expect(2) = 6e-021
Identities = 32/49 (65%), Positives = 35/49 (71%)
Frame = +1 / -1
Query: 418 RAQCS*KG*WCTLHXXXXXXXXXXXXY*Q*PSQLDRLSCCIQHISLWCQ 564
R +C+ KG*WCTLH Y*Q*PSQLDRLSCCIQ+ISLWCQ
Sbjct: 518 RGRCNSKG*WCTLHGSI*SSSCGTWCY*Q*PSQLDRLSCCIQNISLWCQ 372
Score = 41.8 bits (85), Expect(2) = 6e-021
Identities = 21/39 (53%), Positives = 23/39 (58%)
Frame = +1 / -1
Query: 610 FLA*QPWEFLRXXXXXXXXXXTAGRSEACSRALPRRSCS 726
FLA*QP E LR AG+SEACSRA R SC+
Sbjct: 326 FLA*QPLESLRSSCRGSQSS*RAGQSEACSRAPLRTSCN 210
Score = 36.3 bits (73), Expect(2) = 4e-070
Identities = 15/18 (83%), Positives = 15/18 (83%)
Frame = -1 / +1
Query: 845 QVHRLRQDGVPCGQAHRR 792
QV RLRQDGVP QAHRR
Sbjct: 91 QVQRLRQDGVPRRQAHRR 144
Score = 30.9 bits (61), Expect(2) = 3e-047
Identities = 10/11 (90%), Positives = 11/11 (100%)
Frame = +1 / -1
Query: 811 QGTPSCRRRCT 843
+GTPSCRRRCT
Sbjct: 125 RGTPSCRRRCT 93
>gb|BQ464047.1|BQ464047 HF01D07T HF Hordeum vulgare subsp. vulgare cDNA clone HF01D07
5-PRIME, mRNA sequence
Length = 679
Score = 459 bits (996), Expect = e-128
Identities = 178/192 (92%), Positives = 183/192 (95%)
Frame = -2 / +2
Query: 877 AMATSFQGTTTKCTACDKTVYLVDKLTADNRIYHKACFRCHHCKGTLKLANYNSFEGVLY 698
AMATSFQGTTTKC ACDKTVYLVDKLTADNR+YHKACFRCHHCKGTLKLANYNSFEGVLY
Sbjct: 104 AMATSFQGTTTKCNACDKTVYLVDKLTADNRVYHKACFRCHHCKGTLKLANYNSFEGVLY 283
Query: 697 CRPHFDQLFKRTGSLDKSFEGTPKVVKPERNVGNENATKVSSAFAGTREKCVGCSKTVYP 518
CRPHFDQLFKRTGSLDKSFEGTPKVVKPERNVGNENA KVSSAFAGTREKC GCSKTVYP
Sbjct: 284 CRPHFDQLFKRTGSLDKSFEGTPKVVKPERNVGNENAIKVSSAFAGTREKCFGCSKTVYP 463
Query: 517 TERVTVNNTMYHKSCFKCCHGGCTISPSNYIAHEGKLYCKHHHIQLIKEKGNFSQLENDH 338
ERVTVNNTMYHKSCFKCCHGGCTISPSNYIAHEGKL+CKHHH QLIKEKGNFSQLENDH
Sbjct: 464 IERVTVNNTMYHKSCFKCCHGGCTISPSNYIAHEGKLFCKHHHTQLIKEKGNFSQLENDH 643
Query: 337 EKTSQAGSLEED 302
+KTSQ+ +D
Sbjct: 644 DKTSQSAGSVDD 679
Score = 319 bits (692), Expect = 1e-086
Identities = 136/186 (73%), Positives = 142/186 (76%)
Frame = +3 / -2
Query: 324 CDVFSWSFSSWLKFPFSLISWMWWCLQYSFPSCAM*LEGLMVHPPWQHLKQLLWYIXXXX 503
CDV S SFSSWLKFPFSLISW+WWCLQ S PS AM* EGLMVHPPWQHLKQLLWY+
Sbjct: 657 CDVLS*SFSSWLKFPFSLISWVWWCLQKSLPSWAM*FEGLMVHPPWQHLKQLLWYMVLLT 478
Query: 504 XXXXXXXXXXXHPTHFSLVPAKALETLVAFSFPTFLSGLTTLGXXXXXXXXXXXXXNSWS 683
HP HFSLVPA ALETL+AFSFPTFLSGLTT G SWS
Sbjct: 477 VTLSIG*TVLLHPKHFSLVPANALETLIAFSFPTFLSGLTTFGVPSKLLSRLPVLLKSWS 298
Query: 684 K*GLQ*STPSKEL*LASLRVPLQWWQRKQALW*MRLSAVSLSTRYTVLSQAVHLVVVPWK 863
K*GLQ*STPS EL* ASLRVPLQWW KQALW* RLSAVSLSTRYTVLSQA+HLVVVPW
Sbjct: 297 K*GLQ*STPSNEL*FASLRVPLQWWHLKQALW*TRLSAVSLSTRYTVLSQALHLVVVPWN 118
Query: 864 EVAMAA 881
EVA+A+
Sbjct: 117 EVAIAS 100
Score = 249 bits (538), Expect(2) = 4e-070
Identities = 103/136 (75%), Positives = 119/136 (87%)
Frame = -1 / +1
Query: 734 ARQLQLLRGSALLQASLRPAVQEDRELGQELRRNSQGCQARKKRWE*ECY*SLKRLCWHQ 555
AR+LQL+R ALLQASL PA+QED E QELRR+S+GCQARK+ WE*ECY*SL+R+CWHQ
Sbjct: 247 ARELQLVRRGALLQASL*PALQEDWEPRQELRRDSKGCQARKECWE*ECY*SLERICWHQ 426
Query: 554 REMCWMQQDSLSN*EGHC**HYVPQELLQVLPWRVHHQPF*LHCARGEAVLQAPPHPADQ 375
REM WMQQDSLSN*EG+C *H+VPQELLQ+LPWRVHHQPF LH RG+A+LQAPPHPADQ
Sbjct: 427 REMFWMQQDSLSN*EGYCQ*HHVPQELLQMLPWRVHHQPFELHRPRGQALLQAPPHPADQ 606
Query: 374 GEGELQPA*E*PREDI 327
EG+ QPA E R+D+
Sbjct: 607 REGKFQPARERSRQDV 654
Score = 178 bits (383), Expect(2) = 3e-047
Identities = 75/94 (79%), Positives = 85/94 (90%)
Frame = +2 / -1
Query: 425 NVVRRADGAPSMAALEAALVVHSVINSDPLSWIDCLAASNTFLSGASKGA*DFSSILIPN 604
+V+RRADGAPSMAA EAALVVH VI+S+PL+WIDCLAAS TFLSGASK A DF+SILIPN
Sbjct: 556 DVIRRADGAPSMAAFEAALVVHGVIDSNPLNWIDCLAASKTFLSGASKCARDFNSILIPN 377
Query: 605 VSFWLDNLGSSFEALVQAPCPLEQLVEVRPAVEH 706
+ FWLDNL S FEALV+AP PLE+LV+VRPAVEH
Sbjct: 376 IPFWLDNLWSPFEALVEAPSPLEELVKVRPAVEH 275
Score = 160 bits (343), Expect = 1e-038
Identities = 77/93 (82%), Positives = 79/93 (84%)
Frame = -3 / +3
Query: 705 CSTAGLTSTSCSRGQGAWTRASKELPRLSSQKETLGMRMLLKSQAPLLAPERNVLDAARQ 526
CSTAGLT TS SRG GA TRASK L RLSSQK LGMRMLLKS+A LLAPERNVLDAARQ
Sbjct: 276 CSTAGLTLTSSSRGLGASTRASKGLQRLSSQKGMLGMRMLLKSRAHLLAPERNVLDAARQ 455
Query: 525 SIQLRGSLLITLCTTRAASSAAMEGAPSALLTT 427
SIQLRG L IT CTTRAAS+AAMEGAPSAL T
Sbjct: 456 SIQLRGLLSITPCTTRAASNAAMEGAPSALRIT 554
Score = 79.0 bits (166), Expect(2) = 6e-021
Identities = 32/49 (65%), Positives = 35/49 (71%)
Frame = +1 / -3
Query: 418 RAQCS*KG*WCTLHXXXXXXXXXXXXY*Q*PSQLDRLSCCIQHISLWCQ 564
R +C+ KG*WCTLH Y*Q*PSQLDRLSCCIQ+ISLWCQ
Sbjct: 563 RGRCNSKG*WCTLHGSI*SSSCGTWCY*Q*PSQLDRLSCCIQNISLWCQ 417
Score = 41.8 bits (85), Expect(2) = 6e-021
Identities = 21/39 (53%), Positives = 23/39 (58%)
Frame = +1 / -3
Query: 610 FLA*QPWEFLRXXXXXXXXXXTAGRSEACSRALPRRSCS 726
FLA*QP E LR AG+SEACSRA R SC+
Sbjct: 371 FLA*QPLESLRSSCRGSQSS*RAGQSEACSRAPLRTSCN 255
Score = 36.3 bits (73), Expect(2) = 4e-070
Identities = 15/18 (83%), Positives = 15/18 (83%)
Frame = -1 / +1
Query: 845 QVHRLRQDGVPCGQAHRR 792
QV RLRQDGVP QAHRR
Sbjct: 136 QVQRLRQDGVPRRQAHRR 189
Score = 30.9 bits (61), Expect(2) = 3e-047
Identities = 10/11 (90%), Positives = 11/11 (100%)
Frame = +1 / -3
Query: 811 QGTPSCRRRCT 843
+GTPSCRRRCT
Sbjct: 170 RGTPSCRRRCT 138
>gb|BQ764615.1|BQ764615 EBca01_SQ004_K11_R carpel, pre-anthesis, no treatment, cv Optic,
EBca01 Hordeum vulgare subsp. vulgare cDNA clone
EBca01_SQ004_K11 5', mRNA sequence
Length = 746
Score = 389 bits (843), Expect(3) = e-128
Identities = 149/163 (91%), Positives = 154/163 (94%)
Frame = -2 / +3
Query: 787 RIYHKACFRCHHCKGTLKLANYNSFEGVLYCRPHFDQLFKRTGSLDKSFEGTPKVVKPER 608
R+YHKACFRCHHCKGTLKLANYNSFEGVLYCRPHFDQLFKRTGSLDKSFEGTPKVVKPER
Sbjct: 93 RVYHKACFRCHHCKGTLKLANYNSFEGVLYCRPHFDQLFKRTGSLDKSFEGTPKVVKPER 272
Query: 607 NVGNENATKVSSAFAGTREKCVGCSKTVYPTERVTVNNTMYHKSCFKCCHGGCTISPSNY 428
NVGNENA KVSSAFAGTREKC GCSKTVYP ERVTVNNTMYHKSCFKCCHGGCTISPSNY
Sbjct: 273 NVGNENAIKVSSAFAGTREKCFGCSKTVYPIERVTVNNTMYHKSCFKCCHGGCTISPSNY 452
Query: 427 IAHEGKLYCKHHHIQLIKEKGNFSQLENDHEKTSQAGSLEEDE 299
IAHEGKL+CKHHH QLIKEKGNFSQLENDH+KTS + +DE
Sbjct: 453 IAHEGKLFCKHHHTQLIKEKGNFSQLENDHDKTSXSAGSVDDE 581
Score = 255 bits (552), Expect(3) = 5e-089
Identities = 108/155 (69%), Positives = 112/155 (72%)
Frame = +3 / -2
Query: 327 DVFSWSFSSWLKFPFSLISWMWWCLQYSFPSCAM*LEGLMVHPPWQHLKQLLWYIXXXXX 506
DV S SFSSWLKFPFSLISW+WWCLQ S PS AM* EGLMVHPPWQHLKQLLWY+
Sbjct: 553 DVLS*SFSSWLKFPFSLISWVWWCLQKSLPSWAM*FEGLMVHPPWQHLKQLLWYMVLLTV 374
Query: 507 XXXXXXXXXXHPTHFSLVPAKALETLVAFSFPTFLSGLTTLGXXXXXXXXXXXXXNSWSK 686
HP HFSLVPA ALETL+AFSFPTFLSGLTT G SWSK
Sbjct: 373 TLSIG*TVLLHPKHFSLVPANALETLIAFSFPTFLSGLTTFGVPSKLLSRLPVLLKSWSK 194
Query: 687 *GLQ*STPSKEL*LASLRVPLQWWQRKQALW*MRL 791
*GLQ*STPS EL* ASLRVPLQWW KQALW* R+
Sbjct: 193 *GLQ*STPSNEL*FASLRVPLQWWHLKQALW*TRI 89
Score = 249 bits (538), Expect(3) = 3e-078
Identities = 103/136 (75%), Positives = 119/136 (87%)
Frame = -1 / +2
Query: 734 ARQLQLLRGSALLQASLRPAVQEDRELGQELRRNSQGCQARKKRWE*ECY*SLKRLCWHQ 555
AR+LQL+R ALLQASL PA+QED E QELRR+S+GCQARK+ WE*ECY*SL+R+CWHQ
Sbjct: 146 ARELQLVRRGALLQASL*PALQEDWEPRQELRRDSKGCQARKECWE*ECY*SLERICWHQ 325
Query: 554 REMCWMQQDSLSN*EGHC**HYVPQELLQVLPWRVHHQPF*LHCARGEAVLQAPPHPADQ 375
REM WMQQDSLSN*EG+C *H+VPQELLQ+LPWRVHHQPF LH RG+A+LQAPPHPADQ
Sbjct: 326 REMFWMQQDSLSN*EGYCQ*HHVPQELLQMLPWRVHHQPFELHRPRGQALLQAPPHPADQ 505
Query: 374 GEGELQPA*E*PREDI 327
EG+ QPA E R+D+
Sbjct: 506 REGKFQPARERSRQDV 553
Score = 178 bits (383), Expect(4) = 2e-055
Identities = 75/94 (79%), Positives = 85/94 (90%)
Frame = +2 / -1
Query: 425 NVVRRADGAPSMAALEAALVVHSVINSDPLSWIDCLAASNTFLSGASKGA*DFSSILIPN 604
+V+RRADGAPSMAA EAALVVH VI+S+PL+WIDCLAAS TFLSGASK A DF+SILIPN
Sbjct: 455 DVIRRADGAPSMAAFEAALVVHGVIDSNPLNWIDCLAASKTFLSGASKCARDFNSILIPN 276
Query: 605 VSFWLDNLGSSFEALVQAPCPLEQLVEVRPAVEH 706
+ FWLDNL S FEALV+AP PLE+LV+VRPAVEH
Sbjct: 275 IPFWLDNLWSPFEALVEAPSPLEELVKVRPAVEH 174
Score = 160 bits (343), Expect(2) = 6e-045
Identities = 77/93 (82%), Positives = 79/93 (84%)
Frame = -3 / +1
Query: 705 CSTAGLTSTSCSRGQGAWTRASKELPRLSSQKETLGMRMLLKSQAPLLAPERNVLDAARQ 526
CSTAGLT TS SRG GA TRASK L RLSSQK LGMRMLLKS+A LLAPERNVLDAARQ
Sbjct: 175 CSTAGLTLTSSSRGLGASTRASKGLQRLSSQKGMLGMRMLLKSRAHLLAPERNVLDAARQ 354
Query: 525 SIQLRGSLLITLCTTRAASSAAMEGAPSALLTT 427
SIQLRG L IT CTTRAAS+AAMEGAPSAL T
Sbjct: 355 SIQLRGLLSITPCTTRAASNAAMEGAPSALRIT 453
Score = 79.0 bits (166), Expect(2) = 6e-021
Identities = 32/49 (65%), Positives = 35/49 (71%)
Frame = +1 / -3
Query: 418 RAQCS*KG*WCTLHXXXXXXXXXXXXY*Q*PSQLDRLSCCIQHISLWCQ 564
R +C+ KG*WCTLH Y*Q*PSQLDRLSCCIQ+ISLWCQ
Sbjct: 462 RGRCNSKG*WCTLHGSI*SSSCGTWCY*Q*PSQLDRLSCCIQNISLWCQ 316
Score = 72.5 bits (152), Expect(3) = e-128
Identities = 29/30 (96%), Positives = 29/30 (96%)
Frame = -2 / +2
Query: 877 AMATSFQGTTTKCTACDKTVYLVDKLTADN 788
AMATSFQGTTTKC ACDKTVYLVDKLTADN
Sbjct: 2 AMATSFQGTTTKCNACDKTVYLVDKLTADN 91
Score = 63.4 bits (132), Expect(3) = 5e-089
Identities = 27/30 (90%), Positives = 29/30 (96%)
Frame = +3 / -3
Query: 789 LSAVSLSTRYTVLSQAVHLVVVPWKEVAMA 878
LSAVSLSTRYTVLSQA+HLVVVPW EVA+A
Sbjct: 90 LSAVSLSTRYTVLSQALHLVVVPWNEVAIA 1
Score = 48.7 bits (100), Expect(3) = 5e-089
Identities = 24/63 (38%), Positives = 33/63 (52%)
Frame = +1 / -3
Query: 148 TRQQYHCSLNTHDLHW*N*NRTTPQKYIVL*ANARGFIIHLWLCSVINTLVHPPPVTQPV 327
TRQ ++C N DL W N +K ANA G +IHLW+ S NT P+T+
Sbjct: 735 TRQ*HNCLGNALDLDWKNSKEARSRKIYCSGANAEGLVIHLWISSRTNTPSLHHPLTRHX 556
Query: 328 MSS 336
++S
Sbjct: 555 VTS 547
Score = 46.0 bits (94), Expect(3) = 3e-078
Identities = 18/35 (51%), Positives = 21/35 (60%)
Frame = -3 / +1
Query: 345 MTTRRHHRLGHWRRMNKSIDH*AQPQMNNESSCIC 241
+TTRRH G W +SI * P+MNNE CIC
Sbjct: 538 ITTRRHXVPGQWMMKTRSISP*GYPEMNNEPFCIC 642
Score = 41.8 bits (85), Expect(2) = 6e-021
Identities = 21/39 (53%), Positives = 23/39 (58%)
Frame = +1 / -3
Query: 610 FLA*QPWEFLRXXXXXXXXXXTAGRSEACSRALPRRSCS 726
FLA*QP E LR AG+SEACSRA R SC+
Sbjct: 270 FLA*QPLESLRSSCRGSQSS*RAGQSEACSRAPLRTSCN 154
Score = 41.4 bits (84), Expect(2) = 6e-045
Identities = 21/61 (34%), Positives = 35/61 (57%)
Frame = -2 / +3
Query: 331 TSQAGSLEEDEQEY*SLSTTTDE**ILLHLPRALCISVAWFDFSFTNGGHVCSENNDIVV 152
+ AGS+++++ EY*SL + DE* LLHL ++ SF+N V ++N ++
Sbjct: 552 SXSAGSVDDEDSEY*SLRISRDE*RALLHLHQSSISFCCVLLLSFSNRDQVHFQDNYVIA 731
Query: 151 L 149
L
Sbjct: 732 L 734
Score = 37.7 bits (76), Expect(3) = e-128
Identities = 21/50 (42%), Positives = 26/50 (52%)
Frame = -1 / +2
Query: 293 VLITEHNHR*IMNPLAFA*STMYFCGVVRFQFYQWRSCVFREQ*YCCLVS 144
VL+ E R*I +P AFA F F+F+Q RS F Q CLV+
Sbjct: 590 VLVLEDIQR*ITSPSAFAPEQYIFLLRASFEFFQSRSSAFPRQLCYCLVA 739
Score = 36.3 bits (73), Expect(3) = 3e-078
Identities = 15/18 (83%), Positives = 15/18 (83%)
Frame = -1 / +1
Query: 845 QVHRLRQDGVPCGQAHRR 792
QV RLRQDGVP QAHRR
Sbjct: 34 QVQRLRQDGVPRRQAHRR 87
Score = 32.7 bits (65), Expect(4) = 2e-055
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = +3 / -2
Query: 243 KCKRIHYSSVVVLSDQYXXXXXXXDPA 323
KC+R YSS+ +L D Y DPA
Sbjct: 640 KCRRARYSSLDILKD*YSESSSSTDPA 560
Score = 31.3 bits (62), Expect(4) = 2e-055
Identities = 13/19 (68%), Positives = 15/19 (78%)
Frame = +2 / -1
Query: 149 QDNNIIVL*THMTSIGKTE 205
Q NNIIVL H+ SIGKT+
Sbjct: 734 QGNNIIVLEMHLISIGKTQ 678
Score = 30.9 bits (61), Expect(4) = 2e-055
Identities = 10/11 (90%), Positives = 11/11 (100%)
Frame = +1 / -1
Query: 811 QGTPSCRRRCT 843
+GTPSCRRRCT
Sbjct: 68 RGTPSCRRRCT 36
>gb|BM376791.2|BM376791 EBem05_SQ003_E02_R embryo, 14 DPA, no treatment, cv Optic, EBem05
Hordeum vulgare subsp. vulgare cDNA clone
EBem05_SQ003_E02 5', mRNA sequence
Length = 646
Score = 456 bits (990), Expect = e-128
Identities = 177/193 (91%), Positives = 183/193 (94%)
Frame = -2 / +1
Query: 877 AMATSFQGTTTKCTACDKTVYLVDKLTADNRIYHKACFRCHHCKGTLKLANYNSFEGVLY 698
AMATSFQGTTTKC ACDKTVYLVDKLTADNR++HKACFRCHHCKGTLKLANYNSFEGVLY
Sbjct: 58 AMATSFQGTTTKCNACDKTVYLVDKLTADNRVHHKACFRCHHCKGTLKLANYNSFEGVLY 237
Query: 697 CRPHFDQLFKRTGSLDKSFEGTPKVVKPERNVGNENATKVSSAFAGTREKCVGCSKTVYP 518
CRPHFDQLFKRTGSLDKSFEGTPKVVKPERNVGNENA KVSSAFAGTREKC GCSKTVYP
Sbjct: 238 CRPHFDQLFKRTGSLDKSFEGTPKVVKPERNVGNENAIKVSSAFAGTREKCFGCSKTVYP 417
Query: 517 TERVTVNNTMYHKSCFKCCHGGCTISPSNYIAHEGKLYCKHHHIQLIKEKGNFSQLENDH 338
ERVTVNNTMYHKSCFKCCHGGCTISPSNYIAHEGKL+CKHHH QLIKEKG FSQLENDH
Sbjct: 418 IERVTVNNTMYHKSCFKCCHGGCTISPSNYIAHEGKLFCKHHHTQLIKEKGKFSQLENDH 597
Query: 337 EKTSQAGSLEEDE 299
+KTSQ+ +DE
Sbjct: 598 DKTSQSAGSVDDE 636
Score = 315 bits (682), Expect = 3e-085
Identities = 134/186 (72%), Positives = 140/186 (75%)
Frame = +3 / -3
Query: 324 CDVFSWSFSSWLKFPFSLISWMWWCLQYSFPSCAM*LEGLMVHPPWQHLKQLLWYIXXXX 503
CDV S SFSSWL FPFSLISW+WWCLQ S PS AM* EGLMVHPPWQHLKQLLWY+
Sbjct: 611 CDVLS*SFSSWLNFPFSLISWVWWCLQKSLPSWAM*FEGLMVHPPWQHLKQLLWYMVLLT 432
Query: 504 XXXXXXXXXXXHPTHFSLVPAKALETLVAFSFPTFLSGLTTLGXXXXXXXXXXXXXNSWS 683
HP HFSLVPA ALETL+AFSFPTFLSGLTT G SWS
Sbjct: 431 VTLSIG*TVLLHPKHFSLVPANALETLIAFSFPTFLSGLTTFGVPSKLLSRLPVLLKSWS 252
Query: 684 K*GLQ*STPSKEL*LASLRVPLQWWQRKQALW*MRLSAVSLSTRYTVLSQAVHLVVVPWK 863
K*GLQ*STPS EL* ASLRVPLQWW KQALW RLSAVSLSTRYTVLSQA+HLVVVPW
Sbjct: 251 K*GLQ*STPSNEL*FASLRVPLQWWHLKQALWWTRLSAVSLSTRYTVLSQALHLVVVPWN 72
Query: 864 EVAMAA 881
EVA+A+
Sbjct: 71 EVAIAS 54
Score = 250 bits (540), Expect(3) = 2e-071
Identities = 103/136 (75%), Positives = 120/136 (88%)
Frame = -1 / +3
Query: 734 ARQLQLLRGSALLQASLRPAVQEDRELGQELRRNSQGCQARKKRWE*ECY*SLKRLCWHQ 555
AR+LQL+R ALLQASL PA+QED E QELRR+S+GCQARK+ WE*ECY*SL+R+CWHQ
Sbjct: 201 ARELQLVRRGALLQASL*PALQEDWEPRQELRRDSKGCQARKECWE*ECY*SLERICWHQ 380
Query: 554 REMCWMQQDSLSN*EGHC**HYVPQELLQVLPWRVHHQPF*LHCARGEAVLQAPPHPADQ 375
REM WMQQDSLSN*EG+C *H+VPQELLQ+LPWRVHHQPF LH RG+A+LQAPPHPADQ
Sbjct: 381 REMFWMQQDSLSN*EGYCQ*HHVPQELLQMLPWRVHHQPFELHRPRGQALLQAPPHPADQ 560
Query: 374 GEGELQPA*E*PREDI 327
EG++QPA E R+D+
Sbjct: 561 REGKIQPARERSRQDV 608
Score = 178 bits (383), Expect(2) = 3e-047
Identities = 75/94 (79%), Positives = 85/94 (90%)
Frame = +2 / -2
Query: 425 NVVRRADGAPSMAALEAALVVHSVINSDPLSWIDCLAASNTFLSGASKGA*DFSSILIPN 604
+V+RRADGAPSMAA EAALVVH VI+S+PL+WIDCLAAS TFLSGASK A DF+SILIPN
Sbjct: 510 DVIRRADGAPSMAAFEAALVVHGVIDSNPLNWIDCLAASKTFLSGASKCARDFNSILIPN 331
Query: 605 VSFWLDNLGSSFEALVQAPCPLEQLVEVRPAVEH 706
+ FWLDNL S FEALV+AP PLE+LV+VRPAVEH
Sbjct: 330 IPFWLDNLWSPFEALVEAPSPLEELVKVRPAVEH 229
Score = 160 bits (343), Expect = 1e-038
Identities = 77/93 (82%), Positives = 79/93 (84%)
Frame = -3 / +2
Query: 705 CSTAGLTSTSCSRGQGAWTRASKELPRLSSQKETLGMRMLLKSQAPLLAPERNVLDAARQ 526
CSTAGLT TS SRG GA TRASK L RLSSQK LGMRMLLKS+A LLAPERNVLDAARQ
Sbjct: 230 CSTAGLTLTSSSRGLGASTRASKGLQRLSSQKGMLGMRMLLKSRAHLLAPERNVLDAARQ 409
Query: 525 SIQLRGSLLITLCTTRAASSAAMEGAPSALLTT 427
SIQLRG L IT CTTRAAS+AAMEGAPSAL T
Sbjct: 410 SIQLRGLLSITPCTTRAASNAAMEGAPSALRIT 508
Score = 79.0 bits (166), Expect(2) = 6e-021
Identities = 32/49 (65%), Positives = 35/49 (71%)
Frame = +1 / -1
Query: 418 RAQCS*KG*WCTLHXXXXXXXXXXXXY*Q*PSQLDRLSCCIQHISLWCQ 564
R +C+ KG*WCTLH Y*Q*PSQLDRLSCCIQ+ISLWCQ
Sbjct: 517 RGRCNSKG*WCTLHGSI*SSSCGTWCY*Q*PSQLDRLSCCIQNISLWCQ 371
Score = 41.8 bits (85), Expect(2) = 6e-021
Identities = 21/39 (53%), Positives = 23/39 (58%)
Frame = +1 / -1
Query: 610 FLA*QPWEFLRXXXXXXXXXXTAGRSEACSRALPRRSCS 726
FLA*QP E LR AG+SEACSRA R SC+
Sbjct: 325 FLA*QPLESLRSSCRGSQSS*RAGQSEACSRAPLRTSCN 209
Score = 36.3 bits (73), Expect(3) = 2e-071
Identities = 15/18 (83%), Positives = 15/18 (83%)
Frame = -1 / +3
Query: 845 QVHRLRQDGVPCGQAHRR 792
QV RLRQDGVP QAHRR
Sbjct: 90 QVQRLRQDGVPRRQAHRR 143
Score = 30.9 bits (61), Expect(2) = 3e-047
Identities = 10/11 (90%), Positives = 11/11 (100%)
Frame = +1 / -1
Query: 811 QGTPSCRRRCT 843
+GTPSCRRRCT
Sbjct: 124 RGTPSCRRRCT 92
Score = 22.1 bits (42), Expect(3) = 2e-071
Identities = 8/18 (44%), Positives = 10/18 (55%)
Frame = -3 / +2
Query: 345 MTTRRHHRLGHWRRMNKS 292
+TTRRH G W +S
Sbjct: 593 ITTRRHKVPGQWMMKTRS 646
>gb|BJ463425.1|BJ463425 BJ463425 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags27k10 5', mRNA sequence
Length = 634
Score = 450 bits (977), Expect = e-126
Identities = 174/182 (95%), Positives = 177/182 (97%)
Frame = -2 / +2
Query: 877 AMATSFQGTTTKCTACDKTVYLVDKLTADNRIYHKACFRCHHCKGTLKLANYNSFEGVLY 698
AMATSFQGTTTKC ACDKTVYLVDKLTADNR+YHKACFRCHHCKGTLKLANYNSFEGVLY
Sbjct: 89 AMATSFQGTTTKCNACDKTVYLVDKLTADNRVYHKACFRCHHCKGTLKLANYNSFEGVLY 268
Query: 697 CRPHFDQLFKRTGSLDKSFEGTPKVVKPERNVGNENATKVSSAFAGTREKCVGCSKTVYP 518
CRPHFDQLFKRTGSLDKSFEGTPKVVKPERNVGNENA KVSSAFAGTREKC GCSKTVYP
Sbjct: 269 CRPHFDQLFKRTGSLDKSFEGTPKVVKPERNVGNENAIKVSSAFAGTREKCFGCSKTVYP 448
Query: 517 TERVTVNNTMYHKSCFKCCHGGCTISPSNYIAHEGKLYCKHHHIQLIKEKGNFSQLENDH 338
ERVTVNNTMYHKSCFKCCHGGCTISPSNYIAHEGKL+CKHHH QLIKEKGNFSQLENDH
Sbjct: 449 IERVTVNNTMYHKSCFKCCHGGCTISPSNYIAHEGKLFCKHHHTQLIKEKGNFSQLENDH 628
Query: 337 EK 332
+K
Sbjct: 629 DK 634
Score = 311 bits (673), Expect = 4e-084
Identities = 132/180 (73%), Positives = 138/180 (76%)
Frame = +3 / -2
Query: 342 SFSSWLKFPFSLISWMWWCLQYSFPSCAM*LEGLMVHPPWQHLKQLLWYIXXXXXXXXXX 521
SFSSWLKFPFSLISW+WWCLQ S PS AM* EGLMVHPPWQHLKQLLWY+
Sbjct: 624 SFSSWLKFPFSLISWVWWCLQKSLPSWAM*FEGLMVHPPWQHLKQLLWYMVLLTVTLSIG 445
Query: 522 XXXXXHPTHFSLVPAKALETLVAFSFPTFLSGLTTLGXXXXXXXXXXXXXNSWSK*GLQ* 701
HP HFSLVPA ALETL+AFSFPTFLSGLTT G SWSK*GLQ*
Sbjct: 444 *TVLLHPKHFSLVPANALETLIAFSFPTFLSGLTTFGVPSKLLSRLPVLLKSWSK*GLQ* 265
Query: 702 STPSKEL*LASLRVPLQWWQRKQALW*MRLSAVSLSTRYTVLSQAVHLVVVPWKEVAMAA 881
STPS EL* ASLRVPLQWW KQALW* RLSAVSLSTRYTVLSQA+HLVVVPW EVA+A+
Sbjct: 264 STPSNEL*FASLRVPLQWWHLKQALW*TRLSAVSLSTRYTVLSQALHLVVVPWNEVAIAS 85
Score = 245 bits (529), Expect(2) = 6e-069
Identities = 102/134 (76%), Positives = 117/134 (87%)
Frame = -1 / +1
Query: 734 ARQLQLLRGSALLQASLRPAVQEDRELGQELRRNSQGCQARKKRWE*ECY*SLKRLCWHQ 555
AR+LQL+R ALLQASL PA+QED E QELRR+S+GCQARK+ WE*ECY*SL+R+CWHQ
Sbjct: 232 ARELQLVRRGALLQASL*PALQEDWEPRQELRRDSKGCQARKECWE*ECY*SLERICWHQ 411
Query: 554 REMCWMQQDSLSN*EGHC**HYVPQELLQVLPWRVHHQPF*LHCARGEAVLQAPPHPADQ 375
REM WMQQDSLSN*EG+C *H+VPQELLQ+LPWRVHHQPF LH RG+A+LQAPPHPADQ
Sbjct: 412 REMFWMQQDSLSN*EGYCQ*HHVPQELLQMLPWRVHHQPFELHRPRGQALLQAPPHPADQ 591
Query: 374 GEGELQPA*E*PRE 333
EG+ QPA E R+
Sbjct: 592 REGKFQPARERSRQ 633
Score = 178 bits (383), Expect(2) = 3e-047
Identities = 75/94 (79%), Positives = 85/94 (90%)
Frame = +2 / -1
Query: 425 NVVRRADGAPSMAALEAALVVHSVINSDPLSWIDCLAASNTFLSGASKGA*DFSSILIPN 604
+V+RRADGAPSMAA EAALVVH VI+S+PL+WIDCLAAS TFLSGASK A DF+SILIPN
Sbjct: 541 DVIRRADGAPSMAAFEAALVVHGVIDSNPLNWIDCLAASKTFLSGASKCARDFNSILIPN 362
Query: 605 VSFWLDNLGSSFEALVQAPCPLEQLVEVRPAVEH 706
+ FWLDNL S FEALV+AP PLE+LV+VRPAVEH
Sbjct: 361 IPFWLDNLWSPFEALVEAPSPLEELVKVRPAVEH 260
Score = 160 bits (343), Expect = 1e-038
Identities = 77/93 (82%), Positives = 79/93 (84%)
Frame = -3 / +3
Query: 705 CSTAGLTSTSCSRGQGAWTRASKELPRLSSQKETLGMRMLLKSQAPLLAPERNVLDAARQ 526
CSTAGLT TS SRG GA TRASK L RLSSQK LGMRMLLKS+A LLAPERNVLDAARQ
Sbjct: 261 CSTAGLTLTSSSRGLGASTRASKGLQRLSSQKGMLGMRMLLKSRAHLLAPERNVLDAARQ 440
Query: 525 SIQLRGSLLITLCTTRAASSAAMEGAPSALLTT 427
SIQLRG L IT CTTRAAS+AAMEGAPSAL T
Sbjct: 441 SIQLRGLLSITPCTTRAASNAAMEGAPSALRIT 539
Score = 79.0 bits (166), Expect(2) = 6e-021
Identities = 32/49 (65%), Positives = 35/49 (71%)
Frame = +1 / -3
Query: 418 RAQCS*KG*WCTLHXXXXXXXXXXXXY*Q*PSQLDRLSCCIQHISLWCQ 564
R +C+ KG*WCTLH Y*Q*PSQLDRLSCCIQ+ISLWCQ
Sbjct: 548 RGRCNSKG*WCTLHGSI*SSSCGTWCY*Q*PSQLDRLSCCIQNISLWCQ 402
Score = 41.8 bits (85), Expect(2) = 6e-021
Identities = 21/39 (53%), Positives = 23/39 (58%)
Frame = +1 / -3
Query: 610 FLA*QPWEFLRXXXXXXXXXXTAGRSEACSRALPRRSCS 726
FLA*QP E LR AG+SEACSRA R SC+
Sbjct: 356 FLA*QPLESLRSSCRGSQSS*RAGQSEACSRAPLRTSCN 240
Score = 36.3 bits (73), Expect(2) = 6e-069
Identities = 15/18 (83%), Positives = 15/18 (83%)
Frame = -1 / +1
Query: 845 QVHRLRQDGVPCGQAHRR 792
QV RLRQDGVP QAHRR
Sbjct: 121 QVQRLRQDGVPRRQAHRR 174
Score = 30.9 bits (61), Expect(2) = 3e-047
Identities = 10/11 (90%), Positives = 11/11 (100%)
Frame = +1 / -3
Query: 811 QGTPSCRRRCT 843
+GTPSCRRRCT
Sbjct: 155 RGTPSCRRRCT 123
>gb|AL506237.1|AL506237 AL506237 Hordeum vulgare Barke developing caryopsis (3.-15.DAP)
Hordeum vulgare subsp. vulgare cDNA clone HY02H15T 5',
mRNA sequence
Length = 697
Score = 450 bits (976), Expect = e-126
Identities = 174/183 (95%), Positives = 177/183 (96%)
Frame = -2 / +3
Query: 877 AMATSFQGTTTKCTACDKTVYLVDKLTADNRIYHKACFRCHHCKGTLKLANYNSFEGVLY 698
A ATSFQGTTTKC ACDKTVYLVDKLTADNR+YHKACFRCHHCKGTLKLANYNSFEGVLY
Sbjct: 45 AXATSFQGTTTKCNACDKTVYLVDKLTADNRVYHKACFRCHHCKGTLKLANYNSFEGVLY 224
Query: 697 CRPHFDQLFKRTGSLDKSFEGTPKVVKPERNVGNENATKVSSAFAGTREKCVGCSKTVYP 518
CRPHFDQLFKRTGSLDKSFEGTPKVVKPERNVGNENA KVSSAFAGTREKC GCSKTVYP
Sbjct: 225 CRPHFDQLFKRTGSLDKSFEGTPKVVKPERNVGNENAIKVSSAFAGTREKCFGCSKTVYP 404
Query: 517 TERVTVNNTMYHKSCFKCCHGGCTISPSNYIAHEGKLYCKHHHIQLIKEKGNFSQLENDH 338
ERVTVNNTMYHKSCFKCCHGGCTISPSNYIAHEGKL+CKHHH QLIKEKGNFSQLENDH
Sbjct: 405 IERVTVNNTMYHKSCFKCCHGGCTISPSNYIAHEGKLFCKHHHTQLIKEKGNFSQLENDH 584
Query: 337 EKT 329
+KT
Sbjct: 585 DKT 593
Score = 312 bits (676), Expect = 2e-084
Identities = 134/185 (72%), Positives = 140/185 (75%)
Frame = +3 / -1
Query: 327 DVFSWSFSSWLKFPFSLISWMWWCLQYSFPSCAM*LEGLMVHPPWQHLKQLLWYIXXXXX 506
+V S SFSSWLKFPFSLISW+WWCLQ S PS AM* EGLMVHPPWQHLKQLLWY+
Sbjct: 595 NVLS*SFSSWLKFPFSLISWVWWCLQKSLPSWAM*FEGLMVHPPWQHLKQLLWYMVLLTV 416
Query: 507 XXXXXXXXXXHPTHFSLVPAKALETLVAFSFPTFLSGLTTLGXXXXXXXXXXXXXNSWSK 686
HP HFSLVPA ALETL+AFSFPTFLSGLTT G SWSK
Sbjct: 415 TLSIG*TVLLHPKHFSLVPANALETLIAFSFPTFLSGLTTFGVPSKLLSRLPVLLKSWSK 236
Query: 687 *GLQ*STPSKEL*LASLRVPLQWWQRKQALW*MRLSAVSLSTRYTVLSQAVHLVVVPWKE 866
*GLQ*STPS EL* ASLRVPLQWW KQALW* RLSAVSLSTRYTVLSQA+HLVVVPW E
Sbjct: 235 *GLQ*STPSNEL*FASLRVPLQWWHLKQALW*TRLSAVSLSTRYTVLSQALHLVVVPWNE 56
Query: 867 VAMAA 881
VA A+
Sbjct: 55 VAXAS 41
Score = 249 bits (538), Expect(2) = 4e-070
Identities = 103/136 (75%), Positives = 119/136 (87%)
Frame = -1 / +2
Query: 734 ARQLQLLRGSALLQASLRPAVQEDRELGQELRRNSQGCQARKKRWE*ECY*SLKRLCWHQ 555
AR+LQL+R ALLQASL PA+QED E QELRR+S+GCQARK+ WE*ECY*SL+R+CWHQ
Sbjct: 188 ARELQLVRRGALLQASL*PALQEDWEPRQELRRDSKGCQARKECWE*ECY*SLERICWHQ 367
Query: 554 REMCWMQQDSLSN*EGHC**HYVPQELLQVLPWRVHHQPF*LHCARGEAVLQAPPHPADQ 375
REM WMQQDSLSN*EG+C *H+VPQELLQ+LPWRVHHQPF LH RG+A+LQAPPHPADQ
Sbjct: 368 REMFWMQQDSLSN*EGYCQ*HHVPQELLQMLPWRVHHQPFELHRPRGQALLQAPPHPADQ 547
Query: 374 GEGELQPA*E*PREDI 327
EG+ QPA E R+D+
Sbjct: 548 REGKFQPARERSRQDV 595
Score = 178 bits (383), Expect(2) = 3e-047
Identities = 75/94 (79%), Positives = 85/94 (90%)
Frame = +2 / -3
Query: 425 NVVRRADGAPSMAALEAALVVHSVINSDPLSWIDCLAASNTFLSGASKGA*DFSSILIPN 604
+V+RRADGAPSMAA EAALVVH VI+S+PL+WIDCLAAS TFLSGASK A DF+SILIPN
Sbjct: 497 DVIRRADGAPSMAAFEAALVVHGVIDSNPLNWIDCLAASKTFLSGASKCARDFNSILIPN 318
Query: 605 VSFWLDNLGSSFEALVQAPCPLEQLVEVRPAVEH 706
+ FWLDNL S FEALV+AP PLE+LV+VRPAVEH
Sbjct: 317 IPFWLDNLWSPFEALVEAPSPLEELVKVRPAVEH 216
Score = 160 bits (343), Expect = 1e-038
Identities = 77/93 (82%), Positives = 79/93 (84%)
Frame = -3 / +1
Query: 705 CSTAGLTSTSCSRGQGAWTRASKELPRLSSQKETLGMRMLLKSQAPLLAPERNVLDAARQ 526
CSTAGLT TS SRG GA TRASK L RLSSQK LGMRMLLKS+A LLAPERNVLDAARQ
Sbjct: 217 CSTAGLTLTSSSRGLGASTRASKGLQRLSSQKGMLGMRMLLKSRAHLLAPERNVLDAARQ 396
Query: 525 SIQLRGSLLITLCTTRAASSAAMEGAPSALLTT 427
SIQLRG L IT CTTRAAS+AAMEGAPSAL T
Sbjct: 397 SIQLRGLLSITPCTTRAASNAAMEGAPSALRIT 495
Score = 79.0 bits (166), Expect(2) = 6e-021
Identities = 32/49 (65%), Positives = 35/49 (71%)
Frame = +1 / -2
Query: 418 RAQCS*KG*WCTLHXXXXXXXXXXXXY*Q*PSQLDRLSCCIQHISLWCQ 564
R +C+ KG*WCTLH Y*Q*PSQLDRLSCCIQ+ISLWCQ
Sbjct: 504 RGRCNSKG*WCTLHGSI*SSSCGTWCY*Q*PSQLDRLSCCIQNISLWCQ 358
Score = 41.8 bits (85), Expect(2) = 6e-021
Identities = 21/39 (53%), Positives = 23/39 (58%)
Frame = +1 / -2
Query: 610 FLA*QPWEFLRXXXXXXXXXXTAGRSEACSRALPRRSCS 726
FLA*QP E LR AG+SEACSRA R SC+
Sbjct: 312 FLA*QPLESLRSSCRGSQSS*RAGQSEACSRAPLRTSCN 196
Score = 36.3 bits (73), Expect(2) = 4e-070
Identities = 15/18 (83%), Positives = 15/18 (83%)
Frame = -1 / +2
Query: 845 QVHRLRQDGVPCGQAHRR 792
QV RLRQDGVP QAHRR
Sbjct: 77 QVQRLRQDGVPRRQAHRR 130
Score = 30.9 bits (61), Expect(2) = 3e-047
Identities = 10/11 (90%), Positives = 11/11 (100%)
Frame = +1 / -2
Query: 811 QGTPSCRRRCT 843
+GTPSCRRRCT
Sbjct: 111 RGTPSCRRRCT 79
>gb|BU997945.1|BU997945 HI09I01r HI Hordeum vulgare subsp. vulgare cDNA clone HI09I01
5-PRIME, mRNA sequence
Length = 584
Score = 448 bits (972), Expect = e-125
Identities = 173/181 (95%), Positives = 176/181 (97%)
Frame = -2 / +3
Query: 877 AMATSFQGTTTKCTACDKTVYLVDKLTADNRIYHKACFRCHHCKGTLKLANYNSFEGVLY 698
AMATSFQGTTTKC ACDKTVYLVDKLTADNR+YHKACFRCHHCKGTLKLANYNSFEGVLY
Sbjct: 42 AMATSFQGTTTKCNACDKTVYLVDKLTADNRVYHKACFRCHHCKGTLKLANYNSFEGVLY 221
Query: 697 CRPHFDQLFKRTGSLDKSFEGTPKVVKPERNVGNENATKVSSAFAGTREKCVGCSKTVYP 518
CRPHFDQLFKRTGSLDKSFEGTPKVVKPERNVGNENA KVSSAFAGTREKC GCSKTVYP
Sbjct: 222 CRPHFDQLFKRTGSLDKSFEGTPKVVKPERNVGNENAIKVSSAFAGTREKCFGCSKTVYP 401
Query: 517 TERVTVNNTMYHKSCFKCCHGGCTISPSNYIAHEGKLYCKHHHIQLIKEKGNFSQLENDH 338
ERVTVNNTMYHKSCFKCCHGGCTISPSNYIAHEGKL+CKHHH QLIKEKGNFSQLENDH
Sbjct: 402 IERVTVNNTMYHKSCFKCCHGGCTISPSNYIAHEGKLFCKHHHTQLIKEKGNFSQLENDH 581
Query: 337 E 335
+
Sbjct: 582 D 584
Score = 311 bits (673), Expect = 4e-084
Identities = 132/180 (73%), Positives = 138/180 (76%)
Frame = +3 / -2
Query: 342 SFSSWLKFPFSLISWMWWCLQYSFPSCAM*LEGLMVHPPWQHLKQLLWYIXXXXXXXXXX 521
SFSSWLKFPFSLISW+WWCLQ S PS AM* EGLMVHPPWQHLKQLLWY+
Sbjct: 577 SFSSWLKFPFSLISWVWWCLQKSLPSWAM*FEGLMVHPPWQHLKQLLWYMVLLTVTLSIG 398
Query: 522 XXXXXHPTHFSLVPAKALETLVAFSFPTFLSGLTTLGXXXXXXXXXXXXXNSWSK*GLQ* 701
HP HFSLVPA ALETL+AFSFPTFLSGLTT G SWSK*GLQ*
Sbjct: 397 *TVLLHPKHFSLVPANALETLIAFSFPTFLSGLTTFGVPSKLLSRLPVLLKSWSK*GLQ* 218
Query: 702 STPSKEL*LASLRVPLQWWQRKQALW*MRLSAVSLSTRYTVLSQAVHLVVVPWKEVAMAA 881
STPS EL* ASLRVPLQWW KQALW* RLSAVSLSTRYTVLSQA+HLVVVPW EVA+A+
Sbjct: 217 STPSNEL*FASLRVPLQWWHLKQALW*TRLSAVSLSTRYTVLSQALHLVVVPWNEVAIAS 38
Score = 244 bits (527), Expect(2) = 1e-068
Identities = 101/130 (77%), Positives = 115/130 (88%)
Frame = -1 / +2
Query: 734 ARQLQLLRGSALLQASLRPAVQEDRELGQELRRNSQGCQARKKRWE*ECY*SLKRLCWHQ 555
AR+LQL+R ALLQASL PA+QED E QELRR+S+GCQARK+ WE*ECY*SL+R+CWHQ
Sbjct: 185 ARELQLVRRGALLQASL*PALQEDWEPRQELRRDSKGCQARKECWE*ECY*SLERICWHQ 364
Query: 554 REMCWMQQDSLSN*EGHC**HYVPQELLQVLPWRVHHQPF*LHCARGEAVLQAPPHPADQ 375
REM WMQQDSLSN*EG+C *H+VPQELLQ+LPWRVHHQPF LH RG+A+LQAPPHPADQ
Sbjct: 365 REMFWMQQDSLSN*EGYCQ*HHVPQELLQMLPWRVHHQPFELHRPRGQALLQAPPHPADQ 544
Query: 374 GEGELQPA*E 345
EG+ QPA E
Sbjct: 545 REGKFQPARE 574
Score = 178 bits (383), Expect(2) = 3e-047
Identities = 75/94 (79%), Positives = 85/94 (90%)
Frame = +2 / -1
Query: 425 NVVRRADGAPSMAALEAALVVHSVINSDPLSWIDCLAASNTFLSGASKGA*DFSSILIPN 604
+V+RRADGAPSMAA EAALVVH VI+S+PL+WIDCLAAS TFLSGASK A DF+SILIPN
Sbjct: 494 DVIRRADGAPSMAAFEAALVVHGVIDSNPLNWIDCLAASKTFLSGASKCARDFNSILIPN 315
Query: 605 VSFWLDNLGSSFEALVQAPCPLEQLVEVRPAVEH 706
+ FWLDNL S FEALV+AP PLE+LV+VRPAVEH
Sbjct: 314 IPFWLDNLWSPFEALVEAPSPLEELVKVRPAVEH 213
Score = 160 bits (343), Expect = 1e-038
Identities = 77/93 (82%), Positives = 79/93 (84%)
Frame = -3 / +1
Query: 705 CSTAGLTSTSCSRGQGAWTRASKELPRLSSQKETLGMRMLLKSQAPLLAPERNVLDAARQ 526
CSTAGLT TS SRG GA TRASK L RLSSQK LGMRMLLKS+A LLAPERNVLDAARQ
Sbjct: 214 CSTAGLTLTSSSRGLGASTRASKGLQRLSSQKGMLGMRMLLKSRAHLLAPERNVLDAARQ 393
Query: 525 SIQLRGSLLITLCTTRAASSAAMEGAPSALLTT 427
SIQLRG L IT CTTRAAS+AAMEGAPSAL T
Sbjct: 394 SIQLRGLLSITPCTTRAASNAAMEGAPSALRIT 492
Score = 79.0 bits (166), Expect(2) = 6e-021
Identities = 32/49 (65%), Positives = 35/49 (71%)
Frame = +1 / -3
Query: 418 RAQCS*KG*WCTLHXXXXXXXXXXXXY*Q*PSQLDRLSCCIQHISLWCQ 564
R +C+ KG*WCTLH Y*Q*PSQLDRLSCCIQ+ISLWCQ
Sbjct: 501 RGRCNSKG*WCTLHGSI*SSSCGTWCY*Q*PSQLDRLSCCIQNISLWCQ 355
Score = 41.8 bits (85), Expect(2) = 6e-021
Identities = 21/39 (53%), Positives = 23/39 (58%)
Frame = +1 / -3
Query: 610 FLA*QPWEFLRXXXXXXXXXXTAGRSEACSRALPRRSCS 726
FLA*QP E LR AG+SEACSRA R SC+
Sbjct: 309 FLA*QPLESLRSSCRGSQSS*RAGQSEACSRAPLRTSCN 193
Score = 36.3 bits (73), Expect(2) = 1e-068
Identities = 15/18 (83%), Positives = 15/18 (83%)
Frame = -1 / +2
Query: 845 QVHRLRQDGVPCGQAHRR 792
QV RLRQDGVP QAHRR
Sbjct: 74 QVQRLRQDGVPRRQAHRR 127
Score = 30.9 bits (61), Expect(2) = 3e-047
Identities = 10/11 (90%), Positives = 11/11 (100%)
Frame = +1 / -3
Query: 811 QGTPSCRRRCT 843
+GTPSCRRRCT
Sbjct: 108 RGTPSCRRRCT 76
>gb|BM373914.2|BM373914 EBma03_SQ003_B17_R maternal, 8 DPA, no treatment, cv Optic, EBma03
Hordeum vulgare subsp. vulgare cDNA clone
EBma03_SQ003_B17 5', mRNA sequence
Length = 631
Score = 346 bits (750), Expect(2) = e-121
Identities = 135/141 (95%), Positives = 136/141 (96%)
Frame = -2 / +1
Query: 877 AMATSFQGTTTKCTACDKTVYLVDKLTADNRIYHKACFRCHHCKGTLKLANYNSFEGVLY 698
AMATSFQGTTTKC ACDKTVYLVDKLTADNR+YHKACF CHHCKGTLKLANYNSFEGVLY
Sbjct: 61 AMATSFQGTTTKCNACDKTVYLVDKLTADNRVYHKACFWCHHCKGTLKLANYNSFEGVLY 240
Query: 697 CRPHFDQLFKRTGSLDKSFEGTPKVVKPERNVGNENATKVSSAFAGTREKCVGCSKTVYP 518
CRPHFDQLFKRTGSLDKSFEGTPKVVKPERNVGNENA KVSSAFAGTREKC GCSKTVYP
Sbjct: 241 CRPHFDQLFKRTGSLDKSFEGTPKVVKPERNVGNENAIKVSSAFAGTREKCFGCSKTVYP 420
Query: 517 TERVTVNNTMYHKSCFKCCHG 455
ERVTVNNTMYHKSCFKCCHG
Sbjct: 421 IERVTVNNTMYHKSCFKCCHG 483
Score = 227 bits (491), Expect(2) = 7e-081
Identities = 99/142 (69%), Positives = 105/142 (73%)
Frame = +3 / -3
Query: 456 PWQHLKQLLWYIXXXXXXXXXXXXXXXHPTHFSLVPAKALETLVAFSFPTFLSGLTTLGX 635
PWQHLKQLLWY+ HP HFSLVPA ALETL+AFSFPTFLSGLTT G
Sbjct: 482 PWQHLKQLLWYMVLLTVTLSIG*TVLLHPKHFSLVPANALETLIAFSFPTFLSGLTTFGV 303
Query: 636 XXXXXXXXXXXXNSWSK*GLQ*STPSKEL*LASLRVPLQWWQRKQALW*MRLSAVSLSTR 815
SWSK*GLQ*STPS EL* ASLRVPLQWW +KQALW* RLSAVSLSTR
Sbjct: 302 PSKLLSRLPVLLKSWSK*GLQ*STPSNEL*FASLRVPLQWWHQKQALW*TRLSAVSLSTR 123
Query: 816 YTVLSQAVHLVVVPWKEVAMAA 881
YTVLSQA+HLVVVPW EVA+A+
Sbjct: 122 YTVLSQALHLVVVPWNEVAIAS 57
Score = 176 bits (378), Expect(3) = 2e-065
Identities = 73/93 (78%), Positives = 84/93 (90%)
Frame = -1 / +3
Query: 734 ARQLQLLRGSALLQASLRPAVQEDRELGQELRRNSQGCQARKKRWE*ECY*SLKRLCWHQ 555
AR+LQL+R ALLQASL PA+QED E QELRR+S+GCQARK+ WE*ECY*SL+R+CWHQ
Sbjct: 204 ARELQLVRRGALLQASL*PALQEDWEPRQELRRDSKGCQARKECWE*ECY*SLERICWHQ 383
Query: 554 REMCWMQQDSLSN*EGHC**HYVPQELLQVLPW 456
REM WMQQDSLSN*EG+C *H+VPQELLQ+LPW
Sbjct: 384 REMFWMQQDSLSN*EGYCQ*HHVPQELLQMLPW 482
Score = 158 bits (340), Expect(3) = 5e-044
Identities = 67/85 (78%), Positives = 75/85 (88%)
Frame = +2 / -2
Query: 452 PSMAALEAALVVHSVINSDPLSWIDCLAASNTFLSGASKGA*DFSSILIPNVSFWLDNLG 631
P MAA EAALVVH VI+S+PL+WIDCLAAS TFLSGASK A DF+SILIPN+ FWLDNL
Sbjct: 486 PPMAAFEAALVVHGVIDSNPLNWIDCLAASKTFLSGASKCARDFNSILIPNIPFWLDNLW 307
Query: 632 SSFEALVQAPCPLEQLVEVRPAVEH 706
S FEALV+AP PLE+LV+VRPAVEH
Sbjct: 306 SPFEALVEAPSPLEELVKVRPAVEH 232
Score = 145 bits (311), Expect = 4e-034
Identities = 70/85 (82%), Positives = 72/85 (84%)
Frame = -3 / +2
Query: 705 CSTAGLTSTSCSRGQGAWTRASKELPRLSSQKETLGMRMLLKSQAPLLAPERNVLDAARQ 526
CSTAGLT TS SRG GA TRASK L RLSSQK LGMRMLLKS+A LLAPERNVLDAARQ
Sbjct: 233 CSTAGLTLTSSSRGLGASTRASKGLQRLSSQKGMLGMRMLLKSRAHLLAPERNVLDAARQ 412
Query: 525 SIQLRGSLLITLCTTRAASSAAMEG 451
SIQLRG L IT CTTRAAS+AAM G
Sbjct: 413 SIQLRGLLSITPCTTRAASNAAMGG 487
Score = 110 bits (234), Expect(2) = e-121
Identities = 41/46 (89%), Positives = 44/46 (95%)
Frame = -2 / +2
Query: 457 GGCTISPSNYIAHEGKLYCKHHHIQLIKEKGNFSQLENDHEKTSQA 320
GGCTISPSNYIAHEGKL+CKHHH QLIKEKGNFS LENDH+KTSQ+
Sbjct: 482 GGCTISPSNYIAHEGKLFCKHHHTQLIKEKGNFSPLENDHDKTSQS 619
Score = 93.6 bits (198), Expect(2) = 7e-081
Identities = 37/45 (82%), Positives = 38/45 (84%)
Frame = +3 / -2
Query: 324 CDVFSWSFSSWLKFPFSLISWMWWCLQYSFPSCAM*LEGLMVHPP 458
CDV S SFSS LKFPFSLISW+WWCLQ S PS AM* EGLMVHPP
Sbjct: 615 CDVLS*SFSSGLKFPFSLISWVWWCLQKSLPSWAM*FEGLMVHPP 481
Score = 76.2 bits (160), Expect(3) = 2e-065
Identities = 30/43 (69%), Positives = 35/43 (81%)
Frame = -1 / +1
Query: 455 RVHHQPF*LHCARGEAVLQAPPHPADQGEGELQPA*E*PREDI 327
RVHHQPF LH RG+A+LQAPPHPADQ EG+ QPA E R+D+
Sbjct: 484 RVHHQPFELHRPRGQALLQAPPHPADQREGKFQPARERSRQDV 612
Score = 36.3 bits (73), Expect(3) = 2e-065
Identities = 15/18 (83%), Positives = 15/18 (83%)
Frame = -1 / +3
Query: 845 QVHRLRQDGVPCGQAHRR 792
QV RLRQDGVP QAHRR
Sbjct: 93 QVQRLRQDGVPRRQAHRR 146
Score = 30.9 bits (61), Expect(3) = 5e-044
Identities = 10/11 (90%), Positives = 11/11 (100%)
Frame = +1 / -1
Query: 811 QGTPSCRRRCT 843
+GTPSCRRRCT
Sbjct: 127 RGTPSCRRRCT 95
Score = 27.2 bits (53), Expect(3) = 5e-044
Identities = 9/13 (69%), Positives = 11/13 (84%)
Frame = +1 / -3
Query: 418 RAQCS*KG*WCTL 456
R +C+ KG*WCTL
Sbjct: 521 RGRCNSKG*WCTL 483
>gb|AW982205.2|AW982205 HVSMEg0002E10f Hordeum vulgare pre-anthesis spike EST library
HVcDNA0008 (white to yellow anther) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEg0002E10f, mRNA sequence
Length = 828
Score = 408 bits (886), Expect(2) = e-118
Identities = 158/173 (91%), Positives = 162/173 (93%)
Frame = -2 / +1
Query: 877 AMATSFQGTTTKCTACDKTVYLVDKLTADNRIYHKACFRCHHCKGTLKLANYNSFEGVLY 698
AMATSFQGTTTKC ACDKTVYLVDKLTADNR+YHKACFRCHHCKGTLKLANYNSFEGVLY
Sbjct: 169 AMATSFQGTTTKCNACDKTVYLVDKLTADNRVYHKACFRCHHCKGTLKLANYNSFEGVLY 348
Query: 697 CRPHFDQLFKRTGSLDKSFEGTPKVVKPERNVGNENATKVSSAFAGTREKCVGCSKTVYP 518
CRPHFDQLFKRTGSLDKSFEGTPKVVKPERNVGNENA KVSSAFAGTREKC GCSKTVYP
Sbjct: 349 CRPHFDQLFKRTGSLDKSFEGTPKVVKPERNVGNENAIKVSSAFAGTREKCFGCSKTVYP 528
Query: 517 TERVTVNNTMYHKSCFKCCHGGCTISPSNYIAHEGKLYCKHHHIQLIKEKGNF 359
ERVTVNNTMYHKSCFKCCHGGCTI PSN +GKL+CKHHH QL+KEKG F
Sbjct: 529 IERVTVNNTMYHKSCFKCCHGGCTIHPSNTSPTKGKLFCKHHHTQLVKEKGKF 687
Score = 274 bits (592), Expect(2) = 1e-074
Identities = 118/173 (68%), Positives = 124/173 (71%)
Frame = +3 / -2
Query: 363 FPFSLISWMWWCLQYSFPSCAM*LEGLMVHPPWQHLKQLLWYIXXXXXXXXXXXXXXXHP 542
FPFSL SW+WWCLQ S P EG MV PPWQHLKQLLWY+ HP
Sbjct: 683 FPFSLTSWVWWCLQKSLPFVGDVFEG*MVQPPWQHLKQLLWYMVLLTVTLSIG*TVLLHP 504
Query: 543 THFSLVPAKALETLVAFSFPTFLSGLTTLGXXXXXXXXXXXXXNSWSK*GLQ*STPSKEL 722
HFSLVPA ALETL+AFSFPTFLSGLTT G SWSK*GLQ*STPS EL
Sbjct: 503 KHFSLVPANALETLIAFSFPTFLSGLTTFGVPSKLLSRLPVLLKSWSK*GLQ*STPSNEL 324
Query: 723 *LASLRVPLQWWQRKQALW*MRLSAVSLSTRYTVLSQAVHLVVVPWKEVAMAA 881
* ASLRVPLQWW KQALW* RLSAVSLSTRYTVLSQA+HLVVVPW EVA+A+
Sbjct: 323 *FASLRVPLQWWHLKQALW*TRLSAVSLSTRYTVLSQALHLVVVPWNEVAIAS 165
Score = 221 bits (478), Expect(3) = 3e-064
Identities = 91/125 (72%), Positives = 107/125 (85%)
Frame = -1 / +3
Query: 734 ARQLQLLRGSALLQASLRPAVQEDRELGQELRRNSQGCQARKKRWE*ECY*SLKRLCWHQ 555
AR+LQL+R ALLQASL PA+QED E QELRR+S+GCQARK+ WE*ECY*SL+R+CWHQ
Sbjct: 312 ARELQLVRRGALLQASL*PALQEDWEPRQELRRDSKGCQARKECWE*ECY*SLERICWHQ 491
Query: 554 REMCWMQQDSLSN*EGHC**HYVPQELLQVLPWRVHHQPF*LHCARGEAVLQAPPHPADQ 375
REM WMQQDSLSN*EG+C *H+VPQELLQ+LPWR+HH PF G+A+LQAPPHPA Q
Sbjct: 492 REMFWMQQDSLSN*EGYCQ*HHVPQELLQMLPWRLHHSPFEYIAHEGQALLQAPPHPAGQ 671
Query: 374 GEGEL 360
EG++
Sbjct: 672 REGKI 686
Score = 168 bits (361), Expect(2) = 3e-044
Identities = 71/92 (77%), Positives = 81/92 (88%)
Frame = +2 / -1
Query: 431 VRRADGAPSMAALEAALVVHSVINSDPLSWIDCLAASNTFLSGASKGA*DFSSILIPNVS 610
+RR +GA SMAA EAALVVH VI+S+PL+WIDCLAAS TFLSGASK A DF+SILIPN+
Sbjct: 615 IRRVNGATSMAAFEAALVVHGVIDSNPLNWIDCLAASKTFLSGASKCARDFNSILIPNIP 436
Query: 611 FWLDNLGSSFEALVQAPCPLEQLVEVRPAVEH 706
FWLDNL S FEALV+AP PLE+LV+VRPAVEH
Sbjct: 435 FWLDNLWSPFEALVEAPSPLEELVKVRPAVEH 340
Score = 150 bits (322), Expect(3) = 1e-038
Identities = 73/90 (81%), Positives = 75/90 (83%)
Frame = -3 / +2
Query: 705 CSTAGLTSTSCSRGQGAWTRASKELPRLSSQKETLGMRMLLKSQAPLLAPERNVLDAARQ 526
CSTAGLT TS SRG GA TRASK L RLSSQK LGMRMLLKS+A LLAPERNVLDAARQ
Sbjct: 341 CSTAGLTLTSSSRGLGASTRASKGLQRLSSQKGMLGMRMLLKSRAHLLAPERNVLDAARQ 520
Query: 525 SIQLRGSLLITLCTTRAASSAAMEGAPSAL 436
SIQLRG L IT CTTRAAS+AAME AP L
Sbjct: 521 SIQLRGLLSITPCTTRAASNAAMEVAPFTL 610
Score = 37.3 bits (75), Expect(2) = e-118
Identities = 14/26 (53%), Positives = 18/26 (69%)
Frame = -2 / +2
Query: 376 KEKGNFSQLENDHEKTSQAGSLEEDE 299
K + NF LENDHE+TSQ+ +DE
Sbjct: 671 KRRENFXXLENDHEQTSQSAGSMDDE 748
Score = 36.3 bits (73), Expect(3) = 3e-064
Identities = 15/18 (83%), Positives = 15/18 (83%)
Frame = -1 / +3
Query: 845 QVHRLRQDGVPCGQAHRR 792
QV RLRQDGVP QAHRR
Sbjct: 201 QVQRLRQDGVPRRQAHRR 254
Score = 30.9 bits (61), Expect(2) = 3e-044
Identities = 10/11 (90%), Positives = 11/11 (100%)
Frame = +1 / -3
Query: 811 QGTPSCRRRCT 843
+GTPSCRRRCT
Sbjct: 235 RGTPSCRRRCT 203
Score = 26.7 bits (52), Expect(2) = 1e-074
Identities = 10/14 (71%), Positives = 10/14 (71%)
Frame = +3 / -1
Query: 324 CDVFSWSFSSWLKF 365
CDV S SFS W KF
Sbjct: 723 CDVCS*SFSXWXKF 682
Score = 26.3 bits (51), Expect(3) = 3e-064
Identities = 11/30 (36%), Positives = 14/30 (46%)
Frame = -3 / +3
Query: 345 MTTRRHHRLGHWRRMNKSIDH*AQPQMNNE 256
+T RRH G W ++ * PQ NE
Sbjct: 705 ITNRRHKVPGQWMMKTRNFSP*GYPQKINE 794
Score = 24.9 bits (48), Expect(3) = 1e-038
Identities = 10/32 (31%), Positives = 22/32 (68%)
Frame = -2 / +2
Query: 337 EKTSQAGSLEEDEQEY*SLSTTTDE**ILLHL 242
+ + AGS+++++ E+*SL + ++* L +L
Sbjct: 713 QTSQSAGSMDDEDSEF*SLRISPED*RTLRNL 808
Score = 23.1 bits (44), Expect(3) = 1e-038
Identities = 8/11 (72%), Positives = 9/11 (81%)
Frame = -2 / +3
Query: 442 SPSNYIAHEGK 410
SP YIAHEG+
Sbjct: 603 SPFEYIAHEGQ 635
>gb|AV919448.1|AV919448 AV919448 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags6b09 3', mRNA sequence
Length = 687
Score = 399 bits (865), Expect(2) = e-118
Identities = 153/166 (92%), Positives = 158/166 (95%)
Frame = -2 / -3
Query: 796 ADNRIYHKACFRCHHCKGTLKLANYNSFEGVLYCRPHFDQLFKRTGSLDKSFEGTPKVVK 617
ADNR+YHKACFRCHHCKGTLKLANYNSFEGVLYCRPHFDQLFKRTGSLDKSFEGTPKVVK
Sbjct: 685 ADNRVYHKACFRCHHCKGTLKLANYNSFEGVLYCRPHFDQLFKRTGSLDKSFEGTPKVVK 506
Query: 616 PERNVGNENATKVSSAFAGTREKCVGCSKTVYPTERVTVNNTMYHKSCFKCCHGGCTISP 437
PERNVGNENA KVSSAFAGTREKC GCSKTVYP ERVTVNNTMYHKSCFKCCHGGCTISP
Sbjct: 505 PERNVGNENAIKVSSAFAGTREKCFGCSKTVYPIERVTVNNTMYHKSCFKCCHGGCTISP 326
Query: 436 SNYIAHEGKLYCKHHHIQLIKEKGNFSQLENDHEKTSQAGSLEEDE 299
SNYIAHEGKL+CKHHH QLIKEKGNFSQLENDH+KTSQ+ +DE
Sbjct: 325 SNYIAHEGKLFCKHHHTQLIKEKGNFSQLENDHDKTSQSAGSVDDE 188
Score = 264 bits (571), Expect(2) = 5e-076
Identities = 112/158 (70%), Positives = 115/158 (72%)
Frame = +3 / +3
Query: 324 CDVFSWSFSSWLKFPFSLISWMWWCLQYSFPSCAM*LEGLMVHPPWQHLKQLLWYIXXXX 503
CDV S SFSSWLKFPFSLISW+WWCLQ S PS AM* EGLMVHPPWQHLKQLLWY+
Sbjct: 213 CDVLS*SFSSWLKFPFSLISWVWWCLQKSLPSWAM*FEGLMVHPPWQHLKQLLWYMVLLT 392
Query: 504 XXXXXXXXXXXHPTHFSLVPAKALETLVAFSFPTFLSGLTTLGXXXXXXXXXXXXXNSWS 683
HP HFSLVPA ALETL+AFSFPTFLSGLTT G SWS
Sbjct: 393 VTLSIG*TVLLHPKHFSLVPANALETLIAFSFPTFLSGLTTFGVPSKLLSRLPVLLKSWS 572
Query: 684 K*GLQ*STPSKEL*LASLRVPLQWWQRKQALW*MRLSA 797
K*GLQ*STPS EL* ASLRVPLQWW KQALW* RLSA
Sbjct: 573 K*GLQ*STPSNEL*FASLRVPLQWWHLKQALW*TRLSA 686
Score = 249 bits (538), Expect(3) = 2e-074
Identities = 103/136 (75%), Positives = 119/136 (87%)
Frame = -1 / -2
Query: 734 ARQLQLLRGSALLQASLRPAVQEDRELGQELRRNSQGCQARKKRWE*ECY*SLKRLCWHQ 555
AR+LQL+R ALLQASL PA+QED E QELRR+S+GCQARK+ WE*ECY*SL+R+CWHQ
Sbjct: 623 ARELQLVRRGALLQASL*PALQEDWEPRQELRRDSKGCQARKECWE*ECY*SLERICWHQ 444
Query: 554 REMCWMQQDSLSN*EGHC**HYVPQELLQVLPWRVHHQPF*LHCARGEAVLQAPPHPADQ 375
REM WMQQDSLSN*EG+C *H+VPQELLQ+LPWRVHHQPF LH RG+A+LQAPPHPADQ
Sbjct: 443 REMFWMQQDSLSN*EGYCQ*HHVPQELLQMLPWRVHHQPFELHRPRGQALLQAPPHPADQ 264
Query: 374 GEGELQPA*E*PREDI 327
EG+ QPA E R+D+
Sbjct: 263 REGKFQPARERSRQDV 216
Score = 178 bits (383), Expect(3) = 7e-050
Identities = 75/94 (79%), Positives = 85/94 (90%)
Frame = +2 / +2
Query: 425 NVVRRADGAPSMAALEAALVVHSVINSDPLSWIDCLAASNTFLSGASKGA*DFSSILIPN 604
+V+RRADGAPSMAA EAALVVH VI+S+PL+WIDCLAAS TFLSGASK A DF+SILIPN
Sbjct: 314 DVIRRADGAPSMAAFEAALVVHGVIDSNPLNWIDCLAASKTFLSGASKCARDFNSILIPN 493
Query: 605 VSFWLDNLGSSFEALVQAPCPLEQLVEVRPAVEH 706
+ FWLDNL S FEALV+AP PLE+LV+VRPAVEH
Sbjct: 494 IPFWLDNLWSPFEALVEAPSPLEELVKVRPAVEH 595
Score = 160 bits (343), Expect(2) = 2e-045
Identities = 77/93 (82%), Positives = 79/93 (84%)
Frame = -3 / -1
Query: 705 CSTAGLTSTSCSRGQGAWTRASKELPRLSSQKETLGMRMLLKSQAPLLAPERNVLDAARQ 526
CSTAGLT TS SRG GA TRASK L RLSSQK LGMRMLLKS+A LLAPERNVLDAARQ
Sbjct: 594 CSTAGLTLTSSSRGLGASTRASKGLQRLSSQKGMLGMRMLLKSRAHLLAPERNVLDAARQ 415
Query: 525 SIQLRGSLLITLCTTRAASSAAMEGAPSALLTT 427
SIQLRG L IT CTTRAAS+AAMEGAPSAL T
Sbjct: 414 SIQLRGLLSITPCTTRAASNAAMEGAPSALRIT 316
Score = 79.0 bits (166), Expect(2) = 6e-021
Identities = 32/49 (65%), Positives = 35/49 (71%)
Frame = +1 / +1
Query: 418 RAQCS*KG*WCTLHXXXXXXXXXXXXY*Q*PSQLDRLSCCIQHISLWCQ 564
R +C+ KG*WCTLH Y*Q*PSQLDRLSCCIQ+ISLWCQ
Sbjct: 307 RGRCNSKG*WCTLHGSI*SSSCGTWCY*Q*PSQLDRLSCCIQNISLWCQ 453
Score = 46.0 bits (94), Expect(2) = e-118
Identities = 23/56 (41%), Positives = 29/56 (51%)
Frame = -1 / -2
Query: 293 VLITEHNHR*IMNPLAFA*STMYFCGVVRFQFYQWRSCVFREQ*YCCLVSACKRCY 126
VL+ E R*I +P AFA F F+F+Q RS F + Y + ACK CY
Sbjct: 179 VLVLEDIQR*ITSPSAFAPEQYIFLLRASFEFFQSRSSAFXKDNYVIXLVACKPCY 12
Score = 46.0 bits (94), Expect(3) = 2e-074
Identities = 18/35 (51%), Positives = 21/35 (60%)
Frame = -3 / -1
Query: 345 MTTRRHHRLGHWRRMNKSIDH*AQPQMNNESSCIC 241
+TTRRH G W +SI * P+MNNE CIC
Sbjct: 231 ITTRRHKVPGQWMMKTRSISP*GYPEMNNEPFCIC 127
Score = 43.2 bits (88), Expect(2) = 2e-045
Identities = 23/68 (33%), Positives = 37/68 (54%)
Frame = -2 / -3
Query: 331 TSQAGSLEEDEQEY*SLSTTTDE**ILLHLPRALCISVAWFDFSFTNGGHVCSENNDIVV 152
+ AGS+++++ EY*SL + DE* LLHL ++ SF+N V +++
Sbjct: 217 SQSAGSVDDEDSEY*SLRISRDE*RALLHLHQSSISFCCVLLLSFSNRDQVHXPKTIMLL 38
Query: 151 LYLHVNVV 128
HVN+V
Sbjct: 37 XLSHVNLV 14
Score = 41.8 bits (85), Expect(2) = 6e-021
Identities = 21/39 (53%), Positives = 23/39 (58%)
Frame = +1 / +1
Query: 610 FLA*QPWEFLRXXXXXXXXXXTAGRSEACSRALPRRSCS 726
FLA*QP E LR AG+SEACSRA R SC+
Sbjct: 499 FLA*QPLESLRSSCRGSQSS*RAGQSEACSRAPLRTSCN 615
Score = 40.9 bits (83), Expect(2) = 5e-076
Identities = 20/54 (37%), Positives = 27/54 (50%)
Frame = +1 / +1
Query: 175 NTHDLHW*N*NRTTPQKYIVL*ANARGFIIHLWLCSVINTLVHPPPVTQPVMSS 336
N DL W N +K ANA G +IHLW+ S NT P+T+ ++S
Sbjct: 61 NALDLDWKNSKEARSRKIYCSGANAEGLVIHLWISSRTNTPSLHHPLTRHFVTS 222
Score = 32.7 bits (65), Expect(3) = 7e-050
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = +3 / +3
Query: 243 KCKRIHYSSVVVLSDQYXXXXXXXDPA 323
KC+R YSS+ +L D Y DPA
Sbjct: 129 KCRRARYSSLDILKD*YSESSSSTDPA 209
Score = 25.4 bits (49), Expect(3) = 7e-050
Identities = 13/27 (48%), Positives = 15/27 (55%)
Frame = +3 / +3
Query: 126 ITTFTCRYKTTISLFSEHT*PPLVKLK 206
IT FTC I +F + T* L KLK
Sbjct: 12 ITRFTCDKXNNIIVFGKCT*SRLEKLK 92
Score = 24.0 bits (46), Expect(3) = 2e-074
Identities = 10/27 (37%), Positives = 15/27 (55%)
Frame = -3 / -1
Query: 201 VLPMEVMCVQRTMILLSCICM*TLLSL 121
V P+E+ C+ + + M*TLL L
Sbjct: 87 VFPIEIKCIXQRQLCYXPCRM*TLLXL 7
>gb|BQ471999.1|BQ471999 HV04C01r HV Hordeum vulgare subsp. vulgare cDNA clone HV04C01
5-PRIME, mRNA sequence
Length = 572
Score = 417 bits (904), Expect = e-116
Identities = 161/168 (95%), Positives = 163/168 (97%)
Frame = -2 / +2
Query: 877 AMATSFQGTTTKCTACDKTVYLVDKLTADNRIYHKACFRCHHCKGTLKLANYNSFEGVLY 698
AMATSFQGTTTKC ACDKTVYLVDKLTADNR+YHKACFRCHHCKGTLKLANYNSFEGVLY
Sbjct: 68 AMATSFQGTTTKCNACDKTVYLVDKLTADNRVYHKACFRCHHCKGTLKLANYNSFEGVLY 247
Query: 697 CRPHFDQLFKRTGSLDKSFEGTPKVVKPERNVGNENATKVSSAFAGTREKCVGCSKTVYP 518
CRPHFDQLFKRTGSLDKSFEGTPKVVKPERNVGNENA KVSSAFAGTREKC GCSKTVYP
Sbjct: 248 CRPHFDQLFKRTGSLDKSFEGTPKVVKPERNVGNENAIKVSSAFAGTREKCFGCSKTVYP 427
Query: 517 TERVTVNNTMYHKSCFKCCHGGCTISPSNYIAHEGKLYCKHHHIQLIK 374
ERVTVNNTMYHKSCFKCCHGGCTISPSNYIAHEGKL+CKHHH QLIK
Sbjct: 428 IERVTVNNTMYHKSCFKCCHGGCTISPSNYIAHEGKLFCKHHHTQLIK 571
Score = 283 bits (612), Expect = 1e-075
Identities = 121/169 (71%), Positives = 127/169 (75%)
Frame = +3 / -3
Query: 375 LISWMWWCLQYSFPSCAM*LEGLMVHPPWQHLKQLLWYIXXXXXXXXXXXXXXXHPTHFS 554
LISW+WWCLQ S PS AM* EGLMVHPPWQHLKQLLWY+ HP HFS
Sbjct: 570 LISWVWWCLQKSLPSWAM*FEGLMVHPPWQHLKQLLWYMVLLTVTLSIG*TVLLHPKHFS 391
Query: 555 LVPAKALETLVAFSFPTFLSGLTTLGXXXXXXXXXXXXXNSWSK*GLQ*STPSKEL*LAS 734
LVPA ALETL+AFSFPTFLSGLTT G SWSK*GLQ*STPS EL* AS
Sbjct: 390 LVPANALETLIAFSFPTFLSGLTTFGVPSKLLSRLPVLLKSWSK*GLQ*STPSNEL*FAS 211
Query: 735 LRVPLQWWQRKQALW*MRLSAVSLSTRYTVLSQAVHLVVVPWKEVAMAA 881
LRVPLQWW KQALW* RLSAVSLSTRYTVLSQA+HLVVVPW EVA+A+
Sbjct: 210 LRVPLQWWHLKQALW*TRLSAVSLSTRYTVLSQALHLVVVPWNEVAIAS 64
Score = 232 bits (500), Expect(2) = 6e-065
Identities = 95/120 (79%), Positives = 108/120 (90%)
Frame = -1 / +1
Query: 734 ARQLQLLRGSALLQASLRPAVQEDRELGQELRRNSQGCQARKKRWE*ECY*SLKRLCWHQ 555
AR+LQL+R ALLQASL PA+QED E QELRR+S+GCQARK+ WE*ECY*SL+R+CWHQ
Sbjct: 211 ARELQLVRRGALLQASL*PALQEDWEPRQELRRDSKGCQARKECWE*ECY*SLERICWHQ 390
Query: 554 REMCWMQQDSLSN*EGHC**HYVPQELLQVLPWRVHHQPF*LHCARGEAVLQAPPHPADQ 375
REM WMQQDSLSN*EG+C *H+VPQELLQ+LPWRVHHQPF LH RG+A+LQAPPHPADQ
Sbjct: 391 REMFWMQQDSLSN*EGYCQ*HHVPQELLQMLPWRVHHQPFELHRPRGQALLQAPPHPADQ 570
Score = 178 bits (383), Expect(2) = 3e-047
Identities = 75/94 (79%), Positives = 85/94 (90%)
Frame = +2 / -2
Query: 425 NVVRRADGAPSMAALEAALVVHSVINSDPLSWIDCLAASNTFLSGASKGA*DFSSILIPN 604
+V+RRADGAPSMAA EAALVVH VI+S+PL+WIDCLAAS TFLSGASK A DF+SILIPN
Sbjct: 520 DVIRRADGAPSMAAFEAALVVHGVIDSNPLNWIDCLAASKTFLSGASKCARDFNSILIPN 341
Query: 605 VSFWLDNLGSSFEALVQAPCPLEQLVEVRPAVEH 706
+ FWLDNL S FEALV+AP PLE+LV+VRPAVEH
Sbjct: 340 IPFWLDNLWSPFEALVEAPSPLEELVKVRPAVEH 239
Score = 160 bits (343), Expect = 1e-038
Identities = 77/93 (82%), Positives = 79/93 (84%)
Frame = -3 / +3
Query: 705 CSTAGLTSTSCSRGQGAWTRASKELPRLSSQKETLGMRMLLKSQAPLLAPERNVLDAARQ 526
CSTAGLT TS SRG GA TRASK L RLSSQK LGMRMLLKS+A LLAPERNVLDAARQ
Sbjct: 240 CSTAGLTLTSSSRGLGASTRASKGLQRLSSQKGMLGMRMLLKSRAHLLAPERNVLDAARQ 419
Query: 525 SIQLRGSLLITLCTTRAASSAAMEGAPSALLTT 427
SIQLRG L IT CTTRAAS+AAMEGAPSAL T
Sbjct: 420 SIQLRGLLSITPCTTRAASNAAMEGAPSALRIT 518
Score = 79.0 bits (166), Expect(2) = 6e-021
Identities = 32/49 (65%), Positives = 35/49 (71%)
Frame = +1 / -1
Query: 418 RAQCS*KG*WCTLHXXXXXXXXXXXXY*Q*PSQLDRLSCCIQHISLWCQ 564
R +C+ KG*WCTLH Y*Q*PSQLDRLSCCIQ+ISLWCQ
Sbjct: 527 RGRCNSKG*WCTLHGSI*SSSCGTWCY*Q*PSQLDRLSCCIQNISLWCQ 381
Score = 41.8 bits (85), Expect(2) = 6e-021
Identities = 21/39 (53%), Positives = 23/39 (58%)
Frame = +1 / -1
Query: 610 FLA*QPWEFLRXXXXXXXXXXTAGRSEACSRALPRRSCS 726
FLA*QP E LR AG+SEACSRA R SC+
Sbjct: 335 FLA*QPLESLRSSCRGSQSS*RAGQSEACSRAPLRTSCN 219
Score = 36.3 bits (73), Expect(2) = 6e-065
Identities = 15/18 (83%), Positives = 15/18 (83%)
Frame = -1 / +1
Query: 845 QVHRLRQDGVPCGQAHRR 792
QV RLRQDGVP QAHRR
Sbjct: 100 QVQRLRQDGVPRRQAHRR 153
Score = 30.9 bits (61), Expect(2) = 3e-047
Identities = 10/11 (90%), Positives = 11/11 (100%)
Frame = +1 / -1
Query: 811 QGTPSCRRRCT 843
+GTPSCRRRCT
Sbjct: 134 RGTPSCRRRCT 102
>gb|AV918472.1|AV918472 AV918472 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags21c22 3', mRNA sequence
Length = 668
Score = 391 bits (849), Expect(2) = e-111
Identities = 150/163 (92%), Positives = 155/163 (95%)
Frame = -2 / -3
Query: 787 RIYHKACFRCHHCKGTLKLANYNSFEGVLYCRPHFDQLFKRTGSLDKSFEGTPKVVKPER 608
R+YHKACFRCHHCKGTLKLANYNSFEGVLYCRPHFDQLFKRTGSLDKSFEGTPKVVKPER
Sbjct: 666 RVYHKACFRCHHCKGTLKLANYNSFEGVLYCRPHFDQLFKRTGSLDKSFEGTPKVVKPER 487
Query: 607 NVGNENATKVSSAFAGTREKCVGCSKTVYPTERVTVNNTMYHKSCFKCCHGGCTISPSNY 428
NVGNENA KVSSAFAGTREKC GCSKTVYP ERVTVNNTMYHKSCFKCCHGGCTISPSNY
Sbjct: 486 NVGNENAIKVSSAFAGTREKCFGCSKTVYPIERVTVNNTMYHKSCFKCCHGGCTISPSNY 307
Query: 427 IAHEGKLYCKHHHIQLIKEKGNFSQLENDHEKTSQAGSLEEDE 299
IAHEGKL+CKHHH QLIKEKGNFSQLENDH+KTSQ+ +DE
Sbjct: 306 IAHEGKLFCKHHHTQLIKEKGNFSQLENDHDKTSQSAGSVDDE 178
Score = 259 bits (559), Expect(2) = 2e-074
Identities = 109/155 (70%), Positives = 112/155 (72%)
Frame = +3 / +2
Query: 324 CDVFSWSFSSWLKFPFSLISWMWWCLQYSFPSCAM*LEGLMVHPPWQHLKQLLWYIXXXX 503
CDV S SFSSWLKFPFSLISW+WWCLQ S PS AM* EGLMVHPPWQHLKQLLWY+
Sbjct: 203 CDVLS*SFSSWLKFPFSLISWVWWCLQKSLPSWAM*FEGLMVHPPWQHLKQLLWYMVLLT 382
Query: 504 XXXXXXXXXXXHPTHFSLVPAKALETLVAFSFPTFLSGLTTLGXXXXXXXXXXXXXNSWS 683
HP HFSLVPA ALETL+AFSFPTFLSGLTT G SWS
Sbjct: 383 VTLSIG*TVLLHPKHFSLVPANALETLIAFSFPTFLSGLTTFGVPSKLLSRLPVLLKSWS 562
Query: 684 K*GLQ*STPSKEL*LASLRVPLQWWQRKQALW*MR 788
K*GLQ*STPS EL* ASLRVPLQWW KQALW* R
Sbjct: 563 K*GLQ*STPSNEL*FASLRVPLQWWHLKQALW*TR 667
Score = 249 bits (538), Expect(2) = 5e-073
Identities = 103/136 (75%), Positives = 119/136 (87%)
Frame = -1 / -2
Query: 734 ARQLQLLRGSALLQASLRPAVQEDRELGQELRRNSQGCQARKKRWE*ECY*SLKRLCWHQ 555
AR+LQL+R ALLQASL PA+QED E QELRR+S+GCQARK+ WE*ECY*SL+R+CWHQ
Sbjct: 613 ARELQLVRRGALLQASL*PALQEDWEPRQELRRDSKGCQARKECWE*ECY*SLERICWHQ 434
Query: 554 REMCWMQQDSLSN*EGHC**HYVPQELLQVLPWRVHHQPF*LHCARGEAVLQAPPHPADQ 375
REM WMQQDSLSN*EG+C *H+VPQELLQ+LPWRVHHQPF LH RG+A+LQAPPHPADQ
Sbjct: 433 REMFWMQQDSLSN*EGYCQ*HHVPQELLQMLPWRVHHQPFELHRPRGQALLQAPPHPADQ 254
Query: 374 GEGELQPA*E*PREDI 327
EG+ QPA E R+D+
Sbjct: 253 REGKFQPARERSRQDV 206
Score = 178 bits (383), Expect(2) = 8e-048
Identities = 75/94 (79%), Positives = 85/94 (90%)
Frame = +2 / +1
Query: 425 NVVRRADGAPSMAALEAALVVHSVINSDPLSWIDCLAASNTFLSGASKGA*DFSSILIPN 604
+V+RRADGAPSMAA EAALVVH VI+S+PL+WIDCLAAS TFLSGASK A DF+SILIPN
Sbjct: 304 DVIRRADGAPSMAAFEAALVVHGVIDSNPLNWIDCLAASKTFLSGASKCARDFNSILIPN 483
Query: 605 VSFWLDNLGSSFEALVQAPCPLEQLVEVRPAVEH 706
+ FWLDNL S FEALV+AP PLE+LV+VRPAVEH
Sbjct: 484 IPFWLDNLWSPFEALVEAPSPLEELVKVRPAVEH 585
Score = 160 bits (343), Expect(2) = 2e-043
Identities = 77/93 (82%), Positives = 79/93 (84%)
Frame = -3 / -1
Query: 705 CSTAGLTSTSCSRGQGAWTRASKELPRLSSQKETLGMRMLLKSQAPLLAPERNVLDAARQ 526
CSTAGLT TS SRG GA TRASK L RLSSQK LGMRMLLKS+A LLAPERNVLDAARQ
Sbjct: 584 CSTAGLTLTSSSRGLGASTRASKGLQRLSSQKGMLGMRMLLKSRAHLLAPERNVLDAARQ 405
Query: 525 SIQLRGSLLITLCTTRAASSAAMEGAPSALLTT 427
SIQLRG L IT CTTRAAS+AAMEGAPSAL T
Sbjct: 404 SIQLRGLLSITPCTTRAASNAAMEGAPSALRIT 306
Score = 79.0 bits (166), Expect(2) = 6e-021
Identities = 32/49 (65%), Positives = 35/49 (71%)
Frame = +1 / +3
Query: 418 RAQCS*KG*WCTLHXXXXXXXXXXXXY*Q*PSQLDRLSCCIQHISLWCQ 564
R +C+ KG*WCTLH Y*Q*PSQLDRLSCCIQ+ISLWCQ
Sbjct: 297 RGRCNSKG*WCTLHGSI*SSSCGTWCY*Q*PSQLDRLSCCIQNISLWCQ 443
Score = 46.0 bits (94), Expect(2) = 5e-073
Identities = 18/35 (51%), Positives = 21/35 (60%)
Frame = -3 / -1
Query: 345 MTTRRHHRLGHWRRMNKSIDH*AQPQMNNESSCIC 241
+TTRRH G W +SI * P+MNNE CIC
Sbjct: 221 ITTRRHKVPGQWMMKTRSISP*GYPEMNNEPFCIC 117
Score = 41.8 bits (85), Expect(2) = 6e-021
Identities = 21/39 (53%), Positives = 23/39 (58%)
Frame = +1 / +3
Query: 610 FLA*QPWEFLRXXXXXXXXXXTAGRSEACSRALPRRSCS 726
FLA*QP E LR AG+SEACSRA R SC+
Sbjct: 489 FLA*QPLESLRSSCRGSQSS*RAGQSEACSRAPLRTSCN 605
Score = 40.9 bits (83), Expect(2) = 2e-074
Identities = 20/54 (37%), Positives = 27/54 (50%)
Frame = +1 / +3
Query: 175 NTHDLHW*N*NRTTPQKYIVL*ANARGFIIHLWLCSVINTLVHPPPVTQPVMSS 336
N DL W N +K ANA G +IHLW+ S NT P+T+ ++S
Sbjct: 51 NALDLDWKNSKEARSRKIYCSGANAEGLVIHLWISSRTNTPSLHHPLTRHFVTS 212
Score = 36.3 bits (73), Expect(2) = 2e-043
Identities = 19/51 (37%), Positives = 29/51 (56%)
Frame = -2 / -3
Query: 331 TSQAGSLEEDEQEY*SLSTTTDE**ILLHLPRALCISVAWFDFSFTNGGHV 179
+ AGS+++++ EY*SL + DE* LLHL ++ SF+N V
Sbjct: 207 SQSAGSVDDEDSEY*SLRISRDE*RALLHLHQSSISFCCVLLLSFSNRDQV 55
Score = 32.7 bits (65), Expect(2) = 8e-048
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = +3 / +2
Query: 243 KCKRIHYSSVVVLSDQYXXXXXXXDPA 323
KC+R YSS+ +L D Y DPA
Sbjct: 119 KCRRARYSSLDILKD*YSESSSSTDPA 199
Score = 31.8 bits (63), Expect(2) = e-111
Identities = 17/40 (42%), Positives = 21/40 (52%)
Frame = -1 / -2
Query: 293 VLITEHNHR*IMNPLAFA*STMYFCGVVRFQFYQWRSCVF 174
VL+ E R*I +P AFA F F+F+Q RS F
Sbjct: 169 VLVLEDIQR*ITSPSAFAPEQYIFLLRASFEFFQSRSSAF 50
>gb|BJ465856.1|BJ465856 BJ465856 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags27k10 3', mRNA sequence
Length = 658
Score = 381 bits (827), Expect(2) = e-108
Identities = 147/160 (91%), Positives = 151/160 (94%)
Frame = -2 / -3
Query: 778 HKACFRCHHCKGTLKLANYNSFEGVLYCRPHFDQLFKRTGSLDKSFEGTPKVVKPERNVG 599
HKACFRCHHCKGTLKLANYNS EGVLYCRPHFDQLFKRTGSLDKSFEGTPKVVKPERNVG
Sbjct: 656 HKACFRCHHCKGTLKLANYNSXEGVLYCRPHFDQLFKRTGSLDKSFEGTPKVVKPERNVG 477
Query: 598 NENATKVSSAFAGTREKCVGCSKTVYPTERVTVNNTMYHKSCFKCCHGGCTISPSNYIAH 419
NENA KVSSAFAGTREKC GCSKTVYP ERVTVNNTMYHKSCFKCCHGGCTISPSNYIAH
Sbjct: 476 NENAIKVSSAFAGTREKCFGCSKTVYPIERVTVNNTMYHKSCFKCCHGGCTISPSNYIAH 297
Query: 418 EGKLYCKHHHIQLIKEKGNFSQLENDHEKTSQAGSLEEDE 299
EGKL+CKHHH QLIKEKGNFSQLENDH+KTSQ+ +DE
Sbjct: 296 EGKLFCKHHHTQLIKEKGNFSQLENDHDKTSQSAGSVDDE 177
Score = 256 bits (554), Expect(2) = 1e-073
Identities = 107/152 (70%), Positives = 110/152 (72%)
Frame = +3 / +1
Query: 324 CDVFSWSFSSWLKFPFSLISWMWWCLQYSFPSCAM*LEGLMVHPPWQHLKQLLWYIXXXX 503
CDV S SFSSWLKFPFSLISW+WWCLQ S PS AM* EGLMVHPPWQHLKQLLWY+
Sbjct: 202 CDVLS*SFSSWLKFPFSLISWVWWCLQKSLPSWAM*FEGLMVHPPWQHLKQLLWYMVLLT 381
Query: 504 XXXXXXXXXXXHPTHFSLVPAKALETLVAFSFPTFLSGLTTLGXXXXXXXXXXXXXNSWS 683
HP HFSLVPA ALETL+AFSFPTFLSGLTT G SWS
Sbjct: 382 VTLSIG*TVLLHPKHFSLVPANALETLIAFSFPTFLSGLTTFGVPSKLLSRLPVLLKSWS 561
Query: 684 K*GLQ*STPSKEL*LASLRVPLQWWQRKQALW 779
K*GLQ*STPS EL* ASLRVPLQWW KQALW
Sbjct: 562 K*GLQ*STPSNEL*FASLRVPLQWWHLKQALW 657
Score = 246 bits (532), Expect(2) = 3e-072
Identities = 102/136 (75%), Positives = 118/136 (86%)
Frame = -1 / -2
Query: 734 ARQLQLLRGSALLQASLRPAVQEDRELGQELRRNSQGCQARKKRWE*ECY*SLKRLCWHQ 555
AR+LQL+ ALLQASL PA+QED E QELRR+S+GCQARK+ WE*ECY*SL+R+CWHQ
Sbjct: 612 ARELQLVXRGALLQASL*PALQEDWEPRQELRRDSKGCQARKECWE*ECY*SLERICWHQ 433
Query: 554 REMCWMQQDSLSN*EGHC**HYVPQELLQVLPWRVHHQPF*LHCARGEAVLQAPPHPADQ 375
REM WMQQDSLSN*EG+C *H+VPQELLQ+LPWRVHHQPF LH RG+A+LQAPPHPADQ
Sbjct: 432 REMFWMQQDSLSN*EGYCQ*HHVPQELLQMLPWRVHHQPFELHRPRGQALLQAPPHPADQ 253
Query: 374 GEGELQPA*E*PREDI 327
EG+ QPA E R+D+
Sbjct: 252 REGKFQPARERSRQDV 205
Score = 178 bits (383), Expect(2) = 8e-048
Identities = 75/94 (79%), Positives = 85/94 (90%)
Frame = +2 / +3
Query: 425 NVVRRADGAPSMAALEAALVVHSVINSDPLSWIDCLAASNTFLSGASKGA*DFSSILIPN 604
+V+RRADGAPSMAA EAALVVH VI+S+PL+WIDCLAAS TFLSGASK A DF+SILIPN
Sbjct: 303 DVIRRADGAPSMAAFEAALVVHGVIDSNPLNWIDCLAASKTFLSGASKCARDFNSILIPN 482
Query: 605 VSFWLDNLGSSFEALVQAPCPLEQLVEVRPAVEH 706
+ FWLDNL S FEALV+AP PLE+LV+VRPAVEH
Sbjct: 483 IPFWLDNLWSPFEALVEAPSPLEELVKVRPAVEH 584
Score = 160 bits (343), Expect(2) = 2e-043
Identities = 77/93 (82%), Positives = 79/93 (84%)
Frame = -3 / -1
Query: 705 CSTAGLTSTSCSRGQGAWTRASKELPRLSSQKETLGMRMLLKSQAPLLAPERNVLDAARQ 526
CSTAGLT TS SRG GA TRASK L RLSSQK LGMRMLLKS+A LLAPERNVLDAARQ
Sbjct: 583 CSTAGLTLTSSSRGLGASTRASKGLQRLSSQKGMLGMRMLLKSRAHLLAPERNVLDAARQ 404
Query: 525 SIQLRGSLLITLCTTRAASSAAMEGAPSALLTT 427
SIQLRG L IT CTTRAAS+AAMEGAPSAL T
Sbjct: 403 SIQLRGLLSITPCTTRAASNAAMEGAPSALRIT 305
Score = 46.0 bits (94), Expect(2) = 3e-072
Identities = 18/35 (51%), Positives = 21/35 (60%)
Frame = -3 / -1
Query: 345 MTTRRHHRLGHWRRMNKSIDH*AQPQMNNESSCIC 241
+TTRRH G W +SI * P+MNNE CIC
Sbjct: 220 ITTRRHKVPGQWMMKTRSISP*GYPEMNNEPFCIC 116
Score = 40.9 bits (83), Expect(2) = 1e-073
Identities = 20/54 (37%), Positives = 27/54 (50%)
Frame = +1 / +2
Query: 175 NTHDLHW*N*NRTTPQKYIVL*ANARGFIIHLWLCSVINTLVHPPPVTQPVMSS 336
N DL W N +K ANA G +IHLW+ S NT P+T+ ++S
Sbjct: 50 NALDLDWKNSKEARSRKIYCSGANAEGLVIHLWISSRTNTPSLHHPLTRHFVTS 211
Score = 36.3 bits (73), Expect(2) = 2e-043
Identities = 19/51 (37%), Positives = 29/51 (56%)
Frame = -2 / -3
Query: 331 TSQAGSLEEDEQEY*SLSTTTDE**ILLHLPRALCISVAWFDFSFTNGGHV 179
+ AGS+++++ EY*SL + DE* LLHL ++ SF+N V
Sbjct: 206 SQSAGSVDDEDSEY*SLRISRDE*RALLHLHQSSISFCCVLLLSFSNRDQV 54
Score = 32.7 bits (65), Expect(2) = 8e-048
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = +3 / +1
Query: 243 KCKRIHYSSVVVLSDQYXXXXXXXDPA 323
KC+R YSS+ +L D Y DPA
Sbjct: 118 KCRRARYSSLDILKD*YSESSSSTDPA 198
Score = 31.8 bits (63), Expect(2) = e-108
Identities = 17/40 (42%), Positives = 21/40 (52%)
Frame = -1 / -2
Query: 293 VLITEHNHR*IMNPLAFA*STMYFCGVVRFQFYQWRSCVF 174
VL+ E R*I +P AFA F F+F+Q RS F
Sbjct: 168 VLVLEDIQR*ITSPSAFAPEQYIFLLRASFEFFQSRSSAF 49
>gb|AV913180.1|AV913180 AV913180 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags21c22 5', mRNA sequence
Length = 637
Score = 377 bits (817), Expect(2) = e-107
Identities = 145/157 (92%), Positives = 149/157 (94%)
Frame = -2 / +2
Query: 769 CFRCHHCKGTLKLANYNSFEGVLYCRPHFDQLFKRTGSLDKSFEGTPKVVKPERNVGNEN 590
CFRCHHCKGTLKLANYNSFEGVLYCRPHFDQLFKRTGSLDKSFEGTPKVVKPERNVGNEN
Sbjct: 2 CFRCHHCKGTLKLANYNSFEGVLYCRPHFDQLFKRTGSLDKSFEGTPKVVKPERNVGNEN 181
Query: 589 ATKVSSAFAGTREKCVGCSKTVYPTERVTVNNTMYHKSCFKCCHGGCTISPSNYIAHEGK 410
A KVSSAFAGTREKC GCSKTVYP ERVTVNNTMYHKSCFKCCHGGCTISPSNYIAHEGK
Sbjct: 182 AIKVSSAFAGTREKCFGCSKTVYPIERVTVNNTMYHKSCFKCCHGGCTISPSNYIAHEGK 361
Query: 409 LYCKHHHIQLIKEKGNFSQLENDHEKTSQAGSLEEDE 299
L+CKHHH QLIKEKGNFSQLENDH+KTSQ+ +DE
Sbjct: 362 LFCKHHHTQLIKEKGNFSQLENDHDKTSQSAGSVDDE 472
Score = 249 bits (538), Expect(2) = 5e-073
Identities = 103/136 (75%), Positives = 119/136 (87%)
Frame = -1 / +1
Query: 734 ARQLQLLRGSALLQASLRPAVQEDRELGQELRRNSQGCQARKKRWE*ECY*SLKRLCWHQ 555
AR+LQL+R ALLQASL PA+QED E QELRR+S+GCQARK+ WE*ECY*SL+R+CWHQ
Sbjct: 37 ARELQLVRRGALLQASL*PALQEDWEPRQELRRDSKGCQARKECWE*ECY*SLERICWHQ 216
Query: 554 REMCWMQQDSLSN*EGHC**HYVPQELLQVLPWRVHHQPF*LHCARGEAVLQAPPHPADQ 375
REM WMQQDSLSN*EG+C *H+VPQELLQ+LPWRVHHQPF LH RG+A+LQAPPHPADQ
Sbjct: 217 REMFWMQQDSLSN*EGYCQ*HHVPQELLQMLPWRVHHQPFELHRPRGQALLQAPPHPADQ 396
Query: 374 GEGELQPA*E*PREDI 327
EG+ QPA E R+D+
Sbjct: 397 REGKFQPARERSRQDV 444
Score = 248 bits (535), Expect(2) = 4e-071
Identities = 104/149 (69%), Positives = 107/149 (71%)
Frame = +3 / -2
Query: 324 CDVFSWSFSSWLKFPFSLISWMWWCLQYSFPSCAM*LEGLMVHPPWQHLKQLLWYIXXXX 503
CDV S SFSSWLKFPFSLISW+WWCLQ S PS AM* EGLMVHPPWQHLKQLLWY+
Sbjct: 447 CDVLS*SFSSWLKFPFSLISWVWWCLQKSLPSWAM*FEGLMVHPPWQHLKQLLWYMVLLT 268
Query: 504 XXXXXXXXXXXHPTHFSLVPAKALETLVAFSFPTFLSGLTTLGXXXXXXXXXXXXXNSWS 683
HP HFSLVPA ALETL+AFSFPTFLSGLTT G SWS
Sbjct: 267 VTLSIG*TVLLHPKHFSLVPANALETLIAFSFPTFLSGLTTFGVPSKLLSRLPVLLKSWS 88
Query: 684 K*GLQ*STPSKEL*LASLRVPLQWWQRKQ 770
K*GLQ*STPS EL* ASLRVPLQWW KQ
Sbjct: 87 K*GLQ*STPSNEL*FASLRVPLQWWHLKQ 1
Score = 178 bits (383), Expect(2) = 8e-048
Identities = 75/94 (79%), Positives = 85/94 (90%)
Frame = +2 / -1
Query: 425 NVVRRADGAPSMAALEAALVVHSVINSDPLSWIDCLAASNTFLSGASKGA*DFSSILIPN 604
+V+RRADGAPSMAA EAALVVH VI+S+PL+WIDCLAAS TFLSGASK A DF+SILIPN
Sbjct: 346 DVIRRADGAPSMAAFEAALVVHGVIDSNPLNWIDCLAASKTFLSGASKCARDFNSILIPN 167
Query: 605 VSFWLDNLGSSFEALVQAPCPLEQLVEVRPAVEH 706
+ FWLDNL S FEALV+AP PLE+LV+VRPAVEH
Sbjct: 166 IPFWLDNLWSPFEALVEAPSPLEELVKVRPAVEH 65
Score = 160 bits (343), Expect(2) = 2e-043
Identities = 77/93 (82%), Positives = 79/93 (84%)
Frame = -3 / +3
Query: 705 CSTAGLTSTSCSRGQGAWTRASKELPRLSSQKETLGMRMLLKSQAPLLAPERNVLDAARQ 526
CSTAGLT TS SRG GA TRASK L RLSSQK LGMRMLLKS+A LLAPERNVLDAARQ
Sbjct: 66 CSTAGLTLTSSSRGLGASTRASKGLQRLSSQKGMLGMRMLLKSRAHLLAPERNVLDAARQ 245
Query: 525 SIQLRGSLLITLCTTRAASSAAMEGAPSALLTT 427
SIQLRG L IT CTTRAAS+AAMEGAPSAL T
Sbjct: 246 SIQLRGLLSITPCTTRAASNAAMEGAPSALRIT 344
Score = 79.0 bits (166), Expect(2) = 6e-021
Identities = 32/49 (65%), Positives = 35/49 (71%)
Frame = +1 / -3
Query: 418 RAQCS*KG*WCTLHXXXXXXXXXXXXY*Q*PSQLDRLSCCIQHISLWCQ 564
R +C+ KG*WCTLH Y*Q*PSQLDRLSCCIQ+ISLWCQ
Sbjct: 353 RGRCNSKG*WCTLHGSI*SSSCGTWCY*Q*PSQLDRLSCCIQNISLWCQ 207
Score = 46.0 bits (94), Expect(2) = 5e-073
Identities = 18/35 (51%), Positives = 21/35 (60%)
Frame = -3 / +3
Query: 345 MTTRRHHRLGHWRRMNKSIDH*AQPQMNNESSCIC 241
+TTRRH G W +SI * P+MNNE CIC
Sbjct: 429 ITTRRHKVPGQWMMKTRSISP*GYPEMNNEPFCIC 533
Score = 41.8 bits (85), Expect(2) = 6e-021
Identities = 21/39 (53%), Positives = 23/39 (58%)
Frame = +1 / -3
Query: 610 FLA*QPWEFLRXXXXXXXXXXTAGRSEACSRALPRRSCS 726
FLA*QP E LR AG+SEACSRA R SC+
Sbjct: 161 FLA*QPLESLRSSCRGSQSS*RAGQSEACSRAPLRTSCN 45
Score = 40.9 bits (83), Expect(2) = 4e-071
Identities = 20/54 (37%), Positives = 27/54 (50%)
Frame = +1 / -3
Query: 175 NTHDLHW*N*NRTTPQKYIVL*ANARGFIIHLWLCSVINTLVHPPPVTQPVMSS 336
N DL W N +K ANA G +IHLW+ S NT P+T+ ++S
Sbjct: 599 NALDLDWKNSKEARSRKIYCSGANAEGLVIHLWISSRTNTPSLHHPLTRHFVTS 438
Score = 36.3 bits (73), Expect(2) = 2e-043
Identities = 19/51 (37%), Positives = 29/51 (56%)
Frame = -2 / +2
Query: 331 TSQAGSLEEDEQEY*SLSTTTDE**ILLHLPRALCISVAWFDFSFTNGGHV 179
+ AGS+++++ EY*SL + DE* LLHL ++ SF+N V
Sbjct: 443 SQSAGSVDDEDSEY*SLRISRDE*RALLHLHQSSISFCCVLLLSFSNRDQV 595
Score = 32.7 bits (65), Expect(2) = 8e-048
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = +3 / -2
Query: 243 KCKRIHYSSVVVLSDQYXXXXXXXDPA 323
KC+R YSS+ +L D Y DPA
Sbjct: 531 KCRRARYSSLDILKD*YSESSSSTDPA 451
Score = 31.8 bits (63), Expect(2) = e-107
Identities = 17/40 (42%), Positives = 21/40 (52%)
Frame = -1 / +1
Query: 293 VLITEHNHR*IMNPLAFA*STMYFCGVVRFQFYQWRSCVF 174
VL+ E R*I +P AFA F F+F+Q RS F
Sbjct: 481 VLVLEDIQR*ITSPSAFAPEQYIFLLRASFEFFQSRSSAF 600
>gb|BM376958.2|BM376958 EBem05_SQ003_L10_R embryo, 14 DPA, no treatment, cv Optic, EBem05
Hordeum vulgare subsp. vulgare cDNA clone
EBem05_SQ003_L10 5', mRNA sequence
Length = 464
Score = 381 bits (826), Expect = e-105
Identities = 148/153 (96%), Positives = 149/153 (97%)
Frame = -2 / +3
Query: 877 AMATSFQGTTTKCTACDKTVYLVDKLTADNRIYHKACFRCHHCKGTLKLANYNSFEGVLY 698
AMATSFQGTTTKC ACDKTVYLVDKLTADNR+YHKACFRCHHCKGTLKLANYNSFEGVLY
Sbjct: 6 AMATSFQGTTTKCNACDKTVYLVDKLTADNRVYHKACFRCHHCKGTLKLANYNSFEGVLY 185
Query: 697 CRPHFDQLFKRTGSLDKSFEGTPKVVKPERNVGNENATKVSSAFAGTREKCVGCSKTVYP 518
CRPHFDQLFKRTGSLDKSFEGTPKVVKPERNVGNENA KVSSAFAGTREKC GCSKTVYP
Sbjct: 186 CRPHFDQLFKRTGSLDKSFEGTPKVVKPERNVGNENAIKVSSAFAGTREKCFGCSKTVYP 365
Query: 517 TERVTVNNTMYHKSCFKCCHGGCTISPSNYIAH 419
ERVTVNNTMYHKSCFKCCHGGCTISPSNYIAH
Sbjct: 366 IERVTVNNTMYHKSCFKCCHGGCTISPSNYIAH 464
Score = 248 bits (537), Expect = 3e-065
Identities = 109/153 (71%), Positives = 114/153 (74%)
Frame = +3 / -2
Query: 423 AM*LEGLMVHPPWQHLKQLLWYIXXXXXXXXXXXXXXXHPTHFSLVPAKALETLVAFSFP 602
AM* EGLMVHPPWQHLKQLLWY+ HP HFSLVPA ALETL+AFSFP
Sbjct: 460 AM*FEGLMVHPPWQHLKQLLWYMVLLTVTLSIG*TVLLHPKHFSLVPANALETLIAFSFP 281
Query: 603 TFLSGLTTLGXXXXXXXXXXXXXNSWSK*GLQ*STPSKEL*LASLRVPLQWWQRKQALW* 782
TFLSGLTT G SWSK*GLQ*STPS EL* ASLRVPLQWW KQALW*
Sbjct: 280 TFLSGLTTFGVPSKLLSRLPVLLKSWSK*GLQ*STPSNEL*FASLRVPLQWWHLKQALW* 101
Query: 783 MRLSAVSLSTRYTVLSQAVHLVVVPWKEVAMAA 881
RLSAVSLSTRYTVLSQA+HLVVVPW EVA+A+
Sbjct: 100 TRLSAVSLSTRYTVLSQALHLVVVPWNEVAIAS 2
Score = 199 bits (429), Expect(2) = 3e-055
Identities = 82/103 (79%), Positives = 93/103 (90%)
Frame = -1 / +2
Query: 734 ARQLQLLRGSALLQASLRPAVQEDRELGQELRRNSQGCQARKKRWE*ECY*SLKRLCWHQ 555
AR+LQL+R ALLQASL PA+QED E QELRR+S+GCQARK+ WE*ECY*SL+R+CWHQ
Sbjct: 149 ARELQLVRRGALLQASL*PALQEDWEPRQELRRDSKGCQARKECWE*ECY*SLERICWHQ 328
Query: 554 REMCWMQQDSLSN*EGHC**HYVPQELLQVLPWRVHHQPF*LH 426
REM WMQQDSLSN*EG+C *H+VPQELLQ+LPWRVHHQPF LH
Sbjct: 329 REMFWMQQDSLSN*EGYCQ*HHVPQELLQMLPWRVHHQPFELH 457
Score = 178 bits (383), Expect(2) = 3e-047
Identities = 75/94 (79%), Positives = 85/94 (90%)
Frame = +2 / -1
Query: 425 NVVRRADGAPSMAALEAALVVHSVINSDPLSWIDCLAASNTFLSGASKGA*DFSSILIPN 604
+V+RRADGAPSMAA EAALVVH VI+S+PL+WIDCLAAS TFLSGASK A DF+SILIPN
Sbjct: 458 DVIRRADGAPSMAAFEAALVVHGVIDSNPLNWIDCLAASKTFLSGASKCARDFNSILIPN 279
Query: 605 VSFWLDNLGSSFEALVQAPCPLEQLVEVRPAVEH 706
+ FWLDNL S FEALV+AP PLE+LV+VRPAVEH
Sbjct: 278 IPFWLDNLWSPFEALVEAPSPLEELVKVRPAVEH 177
Score = 160 bits (343), Expect = 1e-038
Identities = 77/93 (82%), Positives = 79/93 (84%)
Frame = -3 / +1
Query: 705 CSTAGLTSTSCSRGQGAWTRASKELPRLSSQKETLGMRMLLKSQAPLLAPERNVLDAARQ 526
CSTAGLT TS SRG GA TRASK L RLSSQK LGMRMLLKS+A LLAPERNVLDAARQ
Sbjct: 178 CSTAGLTLTSSSRGLGASTRASKGLQRLSSQKGMLGMRMLLKSRAHLLAPERNVLDAARQ 357
Query: 525 SIQLRGSLLITLCTTRAASSAAMEGAPSALLTT 427
SIQLRG L IT CTTRAAS+AAMEGAPSAL T
Sbjct: 358 SIQLRGLLSITPCTTRAASNAAMEGAPSALRIT 456
Score = 36.3 bits (73), Expect(2) = 3e-055
Identities = 15/18 (83%), Positives = 15/18 (83%)
Frame = -1 / +2
Query: 845 QVHRLRQDGVPCGQAHRR 792
QV RLRQDGVP QAHRR
Sbjct: 38 QVQRLRQDGVPRRQAHRR 91
Score = 30.9 bits (61), Expect(2) = 3e-047
Identities = 10/11 (90%), Positives = 11/11 (100%)
Frame = +1 / -3
Query: 811 QGTPSCRRRCT 843
+GTPSCRRRCT
Sbjct: 72 RGTPSCRRRCT 40
>gb|BU988629.1|BU988629 HF18D11r HF Hordeum vulgare subsp. vulgare cDNA clone HF18D11
5-PRIME, mRNA sequence
Length = 631
Score = 366 bits (793), Expect = e-100
Identities = 142/147 (96%), Positives = 143/147 (97%)
Frame = -2 / +3
Query: 877 AMATSFQGTTTKCTACDKTVYLVDKLTADNRIYHKACFRCHHCKGTLKLANYNSFEGVLY 698
AMATSFQGTTTKC ACDKTVYLVDKLTADNR+YHKACFRCHHCKGTLKLANYNSFEGVLY
Sbjct: 189 AMATSFQGTTTKCNACDKTVYLVDKLTADNRVYHKACFRCHHCKGTLKLANYNSFEGVLY 368
Query: 697 CRPHFDQLFKRTGSLDKSFEGTPKVVKPERNVGNENATKVSSAFAGTREKCVGCSKTVYP 518
CRPHFDQLFKRTGSLDKSFEGTPKVVKPERNVGNENA KVSSAFAGTREKC GCSKTVYP
Sbjct: 369 CRPHFDQLFKRTGSLDKSFEGTPKVVKPERNVGNENAIKVSSAFAGTREKCFGCSKTVYP 548
Query: 517 TERVTVNNTMYHKSCFKCCHGGCTISP 437
ERVTVNNTMYHKSCFKCCHGGCTISP
Sbjct: 549 IERVTVNNTMYHKSCFKCCHGGCTISP 629
Score = 244 bits (527), Expect = 6e-064
Identities = 106/149 (71%), Positives = 111/149 (74%)
Frame = +3 / -1
Query: 435 EGLMVHPPWQHLKQLLWYIXXXXXXXXXXXXXXXHPTHFSLVPAKALETLVAFSFPTFLS 614
EGLMVHPPWQHLKQLLWY+ HP HFSLVPA ALETL+AFSFPTFLS
Sbjct: 631 EGLMVHPPWQHLKQLLWYMVLLTVTLSIG*TVLLHPKHFSLVPANALETLIAFSFPTFLS 452
Query: 615 GLTTLGXXXXXXXXXXXXXNSWSK*GLQ*STPSKEL*LASLRVPLQWWQRKQALW*MRLS 794
GLTT G SWSK*GLQ*STPS EL* ASLRVPLQWW KQALW* RLS
Sbjct: 451 GLTTFGVPSKLLSRLPVLLKSWSK*GLQ*STPSNEL*FASLRVPLQWWHLKQALW*TRLS 272
Query: 795 AVSLSTRYTVLSQAVHLVVVPWKEVAMAA 881
AVSLSTRYTVLSQA+HLVVVPW EVA+A+
Sbjct: 271 AVSLSTRYTVLSQALHLVVVPWNEVAIAS 185
Score = 195 bits (421), Expect(2) = 4e-054
Identities = 80/100 (80%), Positives = 91/100 (91%)
Frame = -1 / +2
Query: 734 ARQLQLLRGSALLQASLRPAVQEDRELGQELRRNSQGCQARKKRWE*ECY*SLKRLCWHQ 555
AR+LQL+R ALLQASL PA+QED E QELRR+S+GCQARK+ WE*ECY*SL+R+CWHQ
Sbjct: 332 ARELQLVRRGALLQASL*PALQEDWEPRQELRRDSKGCQARKECWE*ECY*SLERICWHQ 511
Query: 554 REMCWMQQDSLSN*EGHC**HYVPQELLQVLPWRVHHQPF 435
REM WMQQDSLSN*EG+C *H+VPQELLQ+LPWRVHHQPF
Sbjct: 512 REMFWMQQDSLSN*EGYCQ*HHVPQELLQMLPWRVHHQPF 631
Score = 172 bits (370), Expect(2) = 2e-045
Identities = 73/90 (81%), Positives = 81/90 (90%)
Frame = +2 / -3
Query: 437 RADGAPSMAALEAALVVHSVINSDPLSWIDCLAASNTFLSGASKGA*DFSSILIPNVSFW 616
RADGAPSMAA EAALVVH VI+S+PL+WIDCLAAS TFLSGASK A DF+SILIPN+ FW
Sbjct: 629 RADGAPSMAAFEAALVVHGVIDSNPLNWIDCLAASKTFLSGASKCARDFNSILIPNIPFW 450
Query: 617 LDNLGSSFEALVQAPCPLEQLVEVRPAVEH 706
LDNL S FEALV+AP PLE+LV+VRPAVEH
Sbjct: 449 LDNLWSPFEALVEAPSPLEELVKVRPAVEH 360
Score = 159 bits (341), Expect = 3e-038
Identities = 76/90 (84%), Positives = 78/90 (86%)
Frame = -3 / +1
Query: 705 CSTAGLTSTSCSRGQGAWTRASKELPRLSSQKETLGMRMLLKSQAPLLAPERNVLDAARQ 526
CSTAGLT TS SRG GA TRASK L RLSSQK LGMRMLLKS+A LLAPERNVLDAARQ
Sbjct: 361 CSTAGLTLTSSSRGLGASTRASKGLQRLSSQKGMLGMRMLLKSRAHLLAPERNVLDAARQ 540
Query: 525 SIQLRGSLLITLCTTRAASSAAMEGAPSAL 436
SIQLRG L IT CTTRAAS+AAMEGAPSAL
Sbjct: 541 SIQLRGLLSITPCTTRAASNAAMEGAPSAL 630
Score = 36.3 bits (73), Expect(2) = 4e-054
Identities = 15/18 (83%), Positives = 15/18 (83%)
Frame = -1 / +2
Query: 845 QVHRLRQDGVPCGQAHRR 792
QV RLRQDGVP QAHRR
Sbjct: 221 QVQRLRQDGVPRRQAHRR 274
Score = 30.9 bits (61), Expect(2) = 2e-045
Identities = 10/11 (90%), Positives = 11/11 (100%)
Frame = +1 / -2
Query: 811 QGTPSCRRRCT 843
+GTPSCRRRCT
Sbjct: 255 RGTPSCRRRCT 223
>gb|CA027891.1|CA027891 HZ60F17r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ60F17
5-PRIME, mRNA sequence
Length = 434
Score = 346 bits (749), Expect = 1e-094
Identities = 135/143 (94%), Positives = 137/143 (95%)
Frame = -2 / +1
Query: 757 HHCKGTLKLANYNSFEGVLYCRPHFDQLFKRTGSLDKSFEGTPKVVKPERNVGNENATKV 578
H KGTLKLANYNSFEGVLYCRPHFDQLFKRTGSLDKSFEGTPKVVKPERNVGNENA KV
Sbjct: 4 HEGKGTLKLANYNSFEGVLYCRPHFDQLFKRTGSLDKSFEGTPKVVKPERNVGNENAIKV 183
Query: 577 SSAFAGTREKCVGCSKTVYPTERVTVNNTMYHKSCFKCCHGGCTISPSNYIAHEGKLYCK 398
SSAFAGTREKC GCSKTVYP ERVTVNNTMYHKSCFKCCHGGCTISPSNYIAHEGKL+CK
Sbjct: 184 SSAFAGTREKCFGCSKTVYPIERVTVNNTMYHKSCFKCCHGGCTISPSNYIAHEGKLFCK 363
Query: 397 HHHIQLIKEKGNFSQLENDHEKT 329
HHH QLIKEKGNFSQLENDH+KT
Sbjct: 364 HHHTQLIKEKGNFSQLENDHDKT 432
Score = 249 bits (538), Expect = 2e-065
Identities = 103/136 (75%), Positives = 119/136 (87%)
Frame = -1 / +3
Query: 734 ARQLQLLRGSALLQASLRPAVQEDRELGQELRRNSQGCQARKKRWE*ECY*SLKRLCWHQ 555
AR+LQL+R ALLQASL PA+QED E QELRR+S+GCQARK+ WE*ECY*SL+R+CWHQ
Sbjct: 27 ARELQLVRRGALLQASL*PALQEDWEPRQELRRDSKGCQARKECWE*ECY*SLERICWHQ 206
Query: 554 REMCWMQQDSLSN*EGHC**HYVPQELLQVLPWRVHHQPF*LHCARGEAVLQAPPHPADQ 375
REM WMQQDSLSN*EG+C *H+VPQELLQ+LPWRVHHQPF LH RG+A+LQAPPHPADQ
Sbjct: 207 REMFWMQQDSLSN*EGYCQ*HHVPQELLQMLPWRVHHQPFELHRPRGQALLQAPPHPADQ 386
Query: 374 GEGELQPA*E*PREDI 327
EG+ QPA E R+D+
Sbjct: 387 REGKFQPARERSRQDV 434
Score = 227 bits (491), Expect = 6e-059
Identities = 98/141 (69%), Positives = 101/141 (71%)
Frame = +3 / -1
Query: 327 DVFSWSFSSWLKFPFSLISWMWWCLQYSFPSCAM*LEGLMVHPPWQHLKQLLWYIXXXXX 506
DV S SFSSWLKFPFSLISW+WWCLQ S PS AM* EGLMVHPPWQHLKQLLWY+
Sbjct: 434 DVLS*SFSSWLKFPFSLISWVWWCLQKSLPSWAM*FEGLMVHPPWQHLKQLLWYMVLLTV 255
Query: 507 XXXXXXXXXXHPTHFSLVPAKALETLVAFSFPTFLSGLTTLGXXXXXXXXXXXXXNSWSK 686
HP HFSLVPA ALETL+AFSFPTFLSGLTT G SWSK
Sbjct: 254 TLSIG*TVLLHPKHFSLVPANALETLIAFSFPTFLSGLTTFGVPSKLLSRLPVLLKSWSK 75
Query: 687 *GLQ*STPSKEL*LASLRVPL 749
*GLQ*STPS EL* ASLRVPL
Sbjct: 74 *GLQ*STPSNEL*FASLRVPL 12
Score = 178 bits (383), Expect = 4e-044
Identities = 75/94 (79%), Positives = 85/94 (90%)
Frame = +2 / -3
Query: 425 NVVRRADGAPSMAALEAALVVHSVINSDPLSWIDCLAASNTFLSGASKGA*DFSSILIPN 604
+V+RRADGAPSMAA EAALVVH VI+S+PL+WIDCLAAS TFLSGASK A DF+SILIPN
Sbjct: 336 DVIRRADGAPSMAAFEAALVVHGVIDSNPLNWIDCLAASKTFLSGASKCARDFNSILIPN 157
Query: 605 VSFWLDNLGSSFEALVQAPCPLEQLVEVRPAVEH 706
+ FWLDNL S FEALV+AP PLE+LV+VRPAVEH
Sbjct: 156 IPFWLDNLWSPFEALVEAPSPLEELVKVRPAVEH 55
Score = 160 bits (343), Expect = 1e-038
Identities = 77/93 (82%), Positives = 79/93 (84%)
Frame = -3 / +2
Query: 705 CSTAGLTSTSCSRGQGAWTRASKELPRLSSQKETLGMRMLLKSQAPLLAPERNVLDAARQ 526
CSTAGLT TS SRG GA TRASK L RLSSQK LGMRMLLKS+A LLAPERNVLDAARQ
Sbjct: 56 CSTAGLTLTSSSRGLGASTRASKGLQRLSSQKGMLGMRMLLKSRAHLLAPERNVLDAARQ 235
Query: 525 SIQLRGSLLITLCTTRAASSAAMEGAPSALLTT 427
SIQLRG L IT CTTRAAS+AAMEGAPSAL T
Sbjct: 236 SIQLRGLLSITPCTTRAASNAAMEGAPSALRIT 334
Score = 79.0 bits (166), Expect(2) = 6e-021
Identities = 32/49 (65%), Positives = 35/49 (71%)
Frame = +1 / -2
Query: 418 RAQCS*KG*WCTLHXXXXXXXXXXXXY*Q*PSQLDRLSCCIQHISLWCQ 564
R +C+ KG*WCTLH Y*Q*PSQLDRLSCCIQ+ISLWCQ
Sbjct: 343 RGRCNSKG*WCTLHGSI*SSSCGTWCY*Q*PSQLDRLSCCIQNISLWCQ 197
Score = 41.8 bits (85), Expect(2) = 6e-021
Identities = 21/39 (53%), Positives = 23/39 (58%)
Frame = +1 / -2
Query: 610 FLA*QPWEFLRXXXXXXXXXXTAGRSEACSRALPRRSCS 726
FLA*QP E LR AG+SEACSRA R SC+
Sbjct: 151 FLA*QPLESLRSSCRGSQSS*RAGQSEACSRAPLRTSCN 35
>gb|AV914412.1|AV914412 AV914412 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags6b09 5', mRNA sequence
Length = 574
Score = 268 bits (579), Expect(2) = 5e-083
Identities = 104/116 (89%), Positives = 108/116 (93%)
Frame = -2 / +3
Query: 646 SFEGTPKVVKPERNVGNENATKVSSAFAGTREKCVGCSKTVYPTERVTVNNTMYHKSCFK 467
SFEGTPKVVKPERNVGNENA KVSSAFAGTREKC GCSKTVYP ERVTVNNTMYHKSCFK
Sbjct: 126 SFEGTPKVVKPERNVGNENAIKVSSAFAGTREKCFGCSKTVYPIERVTVNNTMYHKSCFK 305
Query: 466 CCHGGCTISPSNYIAHEGKLYCKHHHIQLIKEKGNFSQLENDHEKTSQAGSLEEDE 299
CCHGGCTISPSNYIAHEGKL+CKHHH QLIKEKGNFSQLENDH+KTSQ+ +DE
Sbjct: 306 CCHGGCTISPSNYIAHEGKLFCKHHHTQLIKEKGNFSQLENDHDKTSQSAGSVDDE 473
Score = 209 bits (450), Expect(3) = 8e-066
Identities = 82/106 (77%), Positives = 95/106 (89%)
Frame = -1 / +2
Query: 644 LRRNSQGCQARKKRWE*ECY*SLKRLCWHQREMCWMQQDSLSN*EGHC**HYVPQELLQV 465
LRR+S+GCQARK+ WE*ECY*SL+R+CWHQREM WMQQDSLSN*EG+C *H+VPQELLQ+
Sbjct: 128 LRRDSKGCQARKECWE*ECY*SLERICWHQREMFWMQQDSLSN*EGYCQ*HHVPQELLQM 307
Query: 464 LPWRVHHQPF*LHCARGEAVLQAPPHPADQGEGELQPA*E*PREDI 327
LPWRVHHQPF LH RG+A+LQAPPHPADQ EG+ QPA E R+D+
Sbjct: 308 LPWRVHHQPFELHRPRGQALLQAPPHPADQREGKFQPARERSRQDV 445
Score = 190 bits (410), Expect(3) = 6e-058
Identities = 76/103 (73%), Positives = 79/103 (76%)
Frame = +3 / -1
Query: 324 CDVFSWSFSSWLKFPFSLISWMWWCLQYSFPSCAM*LEGLMVHPPWQHLKQLLWYIXXXX 503
CDV S SFSSWLKFPFSLISW+WWCLQ S PS AM* EGLMVHPPWQHLKQLLWY+
Sbjct: 448 CDVLS*SFSSWLKFPFSLISWVWWCLQKSLPSWAM*FEGLMVHPPWQHLKQLLWYMVLLT 269
Query: 504 XXXXXXXXXXXHPTHFSLVPAKALETLVAFSFPTFLSGLTTLG 632
HP HFSLVPA ALETL+AFSFPTFLSGLTT G
Sbjct: 268 VTLSIG*TVLLHPKHFSLVPANALETLIAFSFPTFLSGLTTFG 140
Score = 139 bits (299), Expect(3) = 6e-040
Identities = 59/74 (79%), Positives = 66/74 (89%)
Frame = +2 / -3
Query: 425 NVVRRADGAPSMAALEAALVVHSVINSDPLSWIDCLAASNTFLSGASKGA*DFSSILIPN 604
+V+RRADGAPSMAA EAALVVH VI+S+PL+WIDCLAAS TFLSGASK A DF+SILIPN
Sbjct: 347 DVIRRADGAPSMAAFEAALVVHGVIDSNPLNWIDCLAASKTFLSGASKCARDFNSILIPN 168
Query: 605 VSFWLDNLGSSFEA 646
+ FWLDNL S FEA
Sbjct: 167 IPFWLDNLWSPFEA 126
Score = 126 bits (270), Expect(3) = 3e-035
Identities = 61/73 (83%), Positives = 63/73 (86%)
Frame = -3 / +1
Query: 645 ASKELPRLSSQKETLGMRMLLKSQAPLLAPERNVLDAARQSIQLRGSLLITLCTTRAASS 466
ASK L RLSSQK LGMRMLLKS+A LLAPERNVLDAARQSIQLRG L IT CTTRAAS+
Sbjct: 127 ASKGLQRLSSQKGMLGMRMLLKSRAHLLAPERNVLDAARQSIQLRGLLSITPCTTRAASN 306
Query: 465 AAMEGAPSALLTT 427
AAMEGAPSAL T
Sbjct: 307 AAMEGAPSALRIT 345
Score = 60.6 bits (126), Expect(2) = 5e-083
Identities = 23/26 (88%), Positives = 24/26 (92%)
Frame = -2 / +3
Query: 745 GTLKLANYNSFEGVLYCRPHFDQLFK 668
G +LANYNSFEGVLYCRPHFDQLFK
Sbjct: 24 GHPQLANYNSFEGVLYCRPHFDQLFK 101
Score = 46.0 bits (94), Expect(3) = 8e-066
Identities = 18/35 (51%), Positives = 21/35 (60%)
Frame = -3 / +1
Query: 345 MTTRRHHRLGHWRRMNKSIDH*AQPQMNNESSCIC 241
+TTRRH G W +SI * P+MNNE CIC
Sbjct: 430 ITTRRHKVPGQWMMKTRSISP*GYPEMNNEPFCIC 534
Score = 39.1 bits (79), Expect(3) = 6e-058
Identities = 18/20 (90%), Positives = 18/20 (90%)
Frame = +3 / -1
Query: 675 SWSK*GLQ*STPSKEL*LAS 734
SWSK*GLQ*STPS EL* AS
Sbjct: 94 SWSK*GLQ*STPSNEL*FAS 35
Score = 35.0 bits (70), Expect(3) = 3e-035
Identities = 15/30 (50%), Positives = 22/30 (73%)
Frame = -2 / +3
Query: 331 TSQAGSLEEDEQEY*SLSTTTDE**ILLHL 242
+ AGS+++++ EY*SL + DE* LLHL
Sbjct: 444 SQSAGSVDDEDSEY*SLRISRDE*RALLHL 533
Score = 35.0 bits (70), Expect(3) = 8e-066
Identities = 16/22 (72%), Positives = 19/22 (86%)
Frame = -1 / +2
Query: 734 ARQLQLLRGSALLQASLRPAVQ 669
AR+LQL+R ALLQASL PA+Q
Sbjct: 35 ARELQLVRRGALLQASL*PALQ 100
Score = 33.6 bits (67), Expect(3) = 6e-058
Identities = 14/32 (43%), Positives = 20/32 (62%)
Frame = +1 / -2
Query: 241 ANARGFIIHLWLCSVINTLVHPPPVTQPVMSS 336
ANA G +IHLW+ S NT P+T+ ++S
Sbjct: 534 ANAEGLVIHLWISSRTNTPSLHHPLTRHFVTS 439
Score = 32.7 bits (65), Expect(3) = 6e-040
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = +3 / -1
Query: 243 KCKRIHYSSVVVLSDQYXXXXXXXDPA 323
KC+R YSS+ +L D Y DPA
Sbjct: 532 KCRRARYSSLDILKD*YSESSSSTDPA 452
Score = 30.4 bits (60), Expect(3) = 6e-040
Identities = 12/16 (75%), Positives = 14/16 (87%)
Frame = +2 / -3
Query: 659 PCPLEQLVEVRPAVEH 706
P LE+LV+VRPAVEH
Sbjct: 110 PVLLEELVKVRPAVEH 63
Score = 25.4 bits (49), Expect(3) = 3e-035
Identities = 11/16 (68%), Positives = 11/16 (68%)
Frame = -3 / +1
Query: 705 CSTAGLTSTSCSRGQG 658
CSTAGLT TS S G
Sbjct: 64 CSTAGLTLTSSSXRTG 111
>gb|CB859146.1|CB859146 HI09I01w HI Hordeum vulgare subsp. vulgare cDNA clone HI09I01
3-PRIME, mRNA sequence
Length = 636
Score = 293 bits (634), Expect(2) = 6e-082
Identities = 115/127 (90%), Positives = 119/127 (93%)
Frame = -2 / -2
Query: 679 QLFKRTGSLDKSFEGTPKVVKPERNVGNENATKVSSAFAGTREKCVGCSKTVYPTERVTV 500
QLFKRTGSLDKSFEGTPKVVKPERNVGNENA KVSSAFAGTREKC GCSKTVYP ERVTV
Sbjct: 635 QLFKRTGSLDKSFEGTPKVVKPERNVGNENAIKVSSAFAGTREKCFGCSKTVYPIERVTV 456
Query: 499 NNTMYHKSCFKCCHGGCTISPSNYIAHEGKLYCKHHHIQLIKEKGNFSQLENDHEKTSQA 320
NNTMYHKSCFKCCHGGCTISPSNYIAHEGKL+CKHHH QLIKEKGNFSQLENDH+KTSQ+
Sbjct: 455 NNTMYHKSCFKCCHGGCTISPSNYIAHEGKLFCKHHHTQLIKEKGNFSQLENDHDKTSQS 276
Query: 319 GSLEEDE 299
+DE
Sbjct: 275 AGSVDDE 255
Score = 225 bits (485), Expect(3) = 2e-067
Identities = 90/118 (76%), Positives = 104/118 (88%)
Frame = -1 / -1
Query: 680 PAVQEDRELGQELRRNSQGCQARKKRWE*ECY*SLKRLCWHQREMCWMQQDSLSN*EGHC 501
PA+QED E QELRR+S+GCQARK+ WE*ECY*SL+R+CWHQREM WMQQDSLSN*EG+C
Sbjct: 636 PALQEDWEPRQELRRDSKGCQARKECWE*ECY*SLERICWHQREMFWMQQDSLSN*EGYC 457
Query: 500 **HYVPQELLQVLPWRVHHQPF*LHCARGEAVLQAPPHPADQGEGELQPA*E*PREDI 327
*H+VPQELLQ+LPWRVHHQPF LH RG+A+LQAPPHPADQ EG+ QPA E R+D+
Sbjct: 456 Q*HHVPQELLQMLPWRVHHQPFELHRPRGQALLQAPPHPADQREGKFQPARERSRQDV 283
Score = 191 bits (412), Expect(2) = 3e-054
Identities = 78/119 (65%), Positives = 81/119 (68%)
Frame = +3 / +1
Query: 324 CDVFSWSFSSWLKFPFSLISWMWWCLQYSFPSCAM*LEGLMVHPPWQHLKQLLWYIXXXX 503
CDV S SFSSWLKFPFSLISW+WWCLQ S PS AM* EGLMVHPPWQHLKQLLWY+
Sbjct: 280 CDVLS*SFSSWLKFPFSLISWVWWCLQKSLPSWAM*FEGLMVHPPWQHLKQLLWYMVLLT 459
Query: 504 XXXXXXXXXXXHPTHFSLVPAKALETLVAFSFPTFLSGLTTLGXXXXXXXXXXXXXNSW 680
HP HFSLVPA ALETL+AFSFPTFLSGLTT G SW
Sbjct: 460 VTLSIG*TVLLHPKHFSLVPANALETLIAFSFPTFLSGLTTFGVPSKLLSRLPVLLKSW 636
Score = 159 bits (341), Expect(2) = 5e-042
Identities = 67/85 (78%), Positives = 76/85 (89%)
Frame = +2 / +3
Query: 425 NVVRRADGAPSMAALEAALVVHSVINSDPLSWIDCLAASNTFLSGASKGA*DFSSILIPN 604
+V+RRADGAPSMAA EAALVVH VI+S+PL+WIDCLAAS TFLSGASK A DF+SILIPN
Sbjct: 381 DVIRRADGAPSMAAFEAALVVHGVIDSNPLNWIDCLAASKTFLSGASKCARDFNSILIPN 560
Query: 605 VSFWLDNLGSSFEALVQAPCPLEQL 679
+ FWLDNL S FEALV+AP PLE+L
Sbjct: 561 IPFWLDNLWSPFEALVEAPSPLEEL 635
Score = 141 bits (303), Expect(2) = 6e-038
Identities = 69/84 (82%), Positives = 71/84 (84%)
Frame = -3 / -3
Query: 678 SCSRGQGAWTRASKELPRLSSQKETLGMRMLLKSQAPLLAPERNVLDAARQSIQLRGSLL 499
S SRG GA TRASK L RLSSQK LGMRMLLKS+A LLAPERNVLDAARQSIQLRG L
Sbjct: 634 SSSRGLGASTRASKGLQRLSSQKGMLGMRMLLKSRAHLLAPERNVLDAARQSIQLRGLLS 455
Query: 498 ITLCTTRAASSAAMEGAPSALLTT 427
IT CTTRAAS+AAMEGAPSAL T
Sbjct: 454 ITPCTTRAASNAAMEGAPSALRIT 383
Score = 46.0 bits (94), Expect(3) = 2e-067
Identities = 18/35 (51%), Positives = 21/35 (60%)
Frame = -3 / -3
Query: 345 MTTRRHHRLGHWRRMNKSIDH*AQPQMNNESSCIC 241
+TTRRH G W +SI * P+MNNE CIC
Sbjct: 298 ITTRRHKVPGQWMMKTRSISP*GYPEMNNEPFCIC 194
Score = 40.9 bits (83), Expect(2) = 3e-054
Identities = 20/54 (37%), Positives = 27/54 (50%)
Frame = +1 / +2
Query: 175 NTHDLHW*N*NRTTPQKYIVL*ANARGFIIHLWLCSVINTLVHPPPVTQPVMSS 336
N DL W N +K ANA G +IHLW+ S NT P+T+ ++S
Sbjct: 128 NALDLDWKNSKEARSRKIYCSGANAEGLVIHLWISSRTNTPSLHHPLTRHFVTS 289
Score = 36.3 bits (73), Expect(2) = 6e-038
Identities = 19/51 (37%), Positives = 29/51 (56%)
Frame = -2 / -2
Query: 331 TSQAGSLEEDEQEY*SLSTTTDE**ILLHLPRALCISVAWFDFSFTNGGHV 179
+ AGS+++++ EY*SL + DE* LLHL ++ SF+N V
Sbjct: 284 SQSAGSVDDEDSEY*SLRISRDE*RALLHLHQSSISFCCVLLLSFSNRDQV 132
Score = 32.7 bits (65), Expect(2) = 5e-042
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = +3 / +1
Query: 243 KCKRIHYSSVVVLSDQYXXXXXXXDPA 323
KC+R YSS+ +L D Y DPA
Sbjct: 196 KCRRARYSSLDILKD*YSESSSSTDPA 276
Score = 31.8 bits (63), Expect(2) = 6e-082
Identities = 17/40 (42%), Positives = 21/40 (52%)
Frame = -1 / -1
Query: 293 VLITEHNHR*IMNPLAFA*STMYFCGVVRFQFYQWRSCVF 174
VL+ E R*I +P AFA F F+F+Q RS F
Sbjct: 246 VLVLEDIQR*ITSPSAFAPEQYIFLLRASFEFFQSRSSAF 127
Score = 24.4 bits (47), Expect(3) = 2e-067
Identities = 15/46 (32%), Positives = 20/46 (43%)
Frame = -1 / -2
Query: 236 STMYFCGVVRFQFYQWRSCVFREQ*YCCLVSACKRCYL*VRYSTWF 99
S++ FC V+ F F+ Q CLV+ L STWF
Sbjct: 188 SSISFCCVLLLSFSNRDQVHFQRQLCYCLVACKPCYILS*NISTWF 51
>gb|BU988248.1|BU988248 HF17B16r HF Hordeum vulgare subsp. vulgare cDNA clone HF17B16
5-PRIME, mRNA sequence
Length = 532
Score = 280 bits (606), Expect = 8e-075
Identities = 110/114 (96%), Positives = 111/114 (97%)
Frame = -2 / +3
Query: 877 AMATSFQGTTTKCTACDKTVYLVDKLTADNRIYHKACFRCHHCKGTLKLANYNSFEGVLY 698
AMATSFQGTTTKC ACDKTVYLVDKLTADNR+YHKACFRCHHCKGTLKLANYNSFEGVLY
Sbjct: 189 AMATSFQGTTTKCNACDKTVYLVDKLTADNRVYHKACFRCHHCKGTLKLANYNSFEGVLY 368
Query: 697 CRPHFDQLFKRTGSLDKSFEGTPKVVKPERNVGNENATKVSSAFAGTREKCVGC 536
CRPHFDQLFKRTGSLDKSFEGTPKVVKPERNVGNENA KVSSAFAGTREKC GC
Sbjct: 369 CRPHFDQLFKRTGSLDKSFEGTPKVVKPERNVGNENAIKVSSAFAGTREKCFGC 530
Score = 199 bits (430), Expect = 1e-050
Identities = 88/115 (76%), Positives = 92/115 (80%)
Frame = +3 / -1
Query: 537 HPTHFSLVPAKALETLVAFSFPTFLSGLTTLGXXXXXXXXXXXXXNSWSK*GLQ*STPSK 716
HP HFSLVPA ALETL+AFSFPTFLSGLTT G SWSK*GLQ*STPS
Sbjct: 529 HPKHFSLVPANALETLIAFSFPTFLSGLTTFGVPSKLLSRLPVLLKSWSK*GLQ*STPSN 350
Query: 717 EL*LASLRVPLQWWQRKQALW*MRLSAVSLSTRYTVLSQAVHLVVVPWKEVAMAA 881
EL* ASLRVPLQWW KQALW* RLSAVSLSTRYTVLSQA+HLVVVPW EVA+A+
Sbjct: 349 EL*FASLRVPLQWWHLKQALW*TRLSAVSLSTRYTVLSQALHLVVVPWNEVAIAS 185
Score = 122 bits (262), Expect(2) = 2e-032
Identities = 51/67 (76%), Positives = 59/67 (88%)
Frame = -1 / +2
Query: 734 ARQLQLLRGSALLQASLRPAVQEDRELGQELRRNSQGCQARKKRWE*ECY*SLKRLCWHQ 555
AR+LQL+R ALLQASL PA+QED E QELRR+S+GCQARK+ WE*ECY*SL+R+CWHQ
Sbjct: 332 ARELQLVRRGALLQASL*PALQEDWEPRQELRRDSKGCQARKECWE*ECY*SLERICWHQ 511
Query: 554 REMCWMQ 534
REM WMQ
Sbjct: 512 REMFWMQ 532
Score = 105 bits (224), Expect(2) = 1e-025
Identities = 45/57 (78%), Positives = 50/57 (87%)
Frame = +2 / -3
Query: 536 ASNTFLSGASKGA*DFSSILIPNVSFWLDNLGSSFEALVQAPCPLEQLVEVRPAVEH 706
AS TFLSGASK A DF+SILIPN+ FWLDNL S FEALV+AP PLE+LV+VRPAVEH
Sbjct: 530 ASKTFLSGASKCARDFNSILIPNIPFWLDNLWSPFEALVEAPSPLEELVKVRPAVEH 360
Score = 36.3 bits (73), Expect(2) = 2e-032
Identities = 15/18 (83%), Positives = 15/18 (83%)
Frame = -1 / +2
Query: 845 QVHRLRQDGVPCGQAHRR 792
QV RLRQDGVP QAHRR
Sbjct: 221 QVQRLRQDGVPRRQAHRR 274
Score = 30.9 bits (61), Expect(2) = 1e-025
Identities = 10/11 (90%), Positives = 11/11 (100%)
Frame = +1 / -2
Query: 811 QGTPSCRRRCT 843
+GTPSCRRRCT
Sbjct: 255 RGTPSCRRRCT 223
>gb|BQ657073.1|BQ657073 HA09M17u HA Hordeum vulgare subsp. vulgare cDNA clone HA09M17
3-PRIME, mRNA sequence
Length = 550
Score = 263 bits (569), Expect(3) = 1e-074
Identities = 102/114 (89%), Positives = 106/114 (92%)
Frame = -2 / -2
Query: 640 EGTPKVVKPERNVGNENATKVSSAFAGTREKCVGCSKTVYPTERVTVNNTMYHKSCFKCC 461
EGTPKVVKPERNVGNENA KVSSAFAGTREKC GCSKTVYP ERVTVNNTMYHKSCFKCC
Sbjct: 549 EGTPKVVKPERNVGNENAIKVSSAFAGTREKCFGCSKTVYPIERVTVNNTMYHKSCFKCC 370
Query: 460 HGGCTISPSNYIAHEGKLYCKHHHIQLIKEKGNFSQLENDHEKTSQAGSLEEDE 299
HGGCTISPSNYIAHEGKL+CKHHH QLIKEKGNFSQLENDH+KTSQ+ +DE
Sbjct: 369 HGGCTISPSNYIAHEGKLFCKHHHTQLIKEKGNFSQLENDHDKTSQSAGSVDDE 208
Score = 207 bits (446), Expect(3) = 1e-061
Identities = 81/105 (77%), Positives = 94/105 (89%)
Frame = -1 / -1
Query: 641 RRNSQGCQARKKRWE*ECY*SLKRLCWHQREMCWMQQDSLSN*EGHC**HYVPQELLQVL 462
RR+S+GCQARK+ WE*ECY*SL+R+CWHQREM WMQQDSLSN*EG+C *H+VPQELLQ+L
Sbjct: 550 RRDSKGCQARKECWE*ECY*SLERICWHQREMFWMQQDSLSN*EGYCQ*HHVPQELLQML 371
Query: 461 PWRVHHQPF*LHCARGEAVLQAPPHPADQGEGELQPA*E*PREDI 327
PWRVHHQPF LH RG+A+LQAPPHPADQ EG+ QPA E R+D+
Sbjct: 370 PWRVHHQPFELHRPRGQALLQAPPHPADQREGKFQPARERSRQDV 236
Score = 190 bits (410), Expect(2) = 6e-054
Identities = 76/103 (73%), Positives = 79/103 (76%)
Frame = +3 / +2
Query: 324 CDVFSWSFSSWLKFPFSLISWMWWCLQYSFPSCAM*LEGLMVHPPWQHLKQLLWYIXXXX 503
CDV S SFSSWLKFPFSLISW+WWCLQ S PS AM* EGLMVHPPWQHLKQLLWY+
Sbjct: 233 CDVLS*SFSSWLKFPFSLISWVWWCLQKSLPSWAM*FEGLMVHPPWQHLKQLLWYMVLLT 412
Query: 504 XXXXXXXXXXXHPTHFSLVPAKALETLVAFSFPTFLSGLTTLG 632
HP HFSLVPA ALETL+AFSFPTFLSGLTT G
Sbjct: 413 VTLSIG*TVLLHPKHFSLVPANALETLIAFSFPTFLSGLTTFG 541
Score = 135 bits (290), Expect(2) = 4e-035
Identities = 57/72 (79%), Positives = 64/72 (88%)
Frame = +2 / +1
Query: 425 NVVRRADGAPSMAALEAALVVHSVINSDPLSWIDCLAASNTFLSGASKGA*DFSSILIPN 604
+V+RRADGAPSMAA EAALVVH VI+S+PL+WIDCLAAS TFLSGASK A DF+SILIPN
Sbjct: 334 DVIRRADGAPSMAAFEAALVVHGVIDSNPLNWIDCLAASKTFLSGASKCARDFNSILIPN 513
Query: 605 VSFWLDNLGSSF 640
+ FWLDNL S F
Sbjct: 514 IPFWLDNLWSPF 549
Score = 122 bits (262), Expect(2) = 2e-032
Identities = 59/71 (83%), Positives = 61/71 (85%)
Frame = -3 / -3
Query: 639 KELPRLSSQKETLGMRMLLKSQAPLLAPERNVLDAARQSIQLRGSLLITLCTTRAASSAA 460
K L RLSSQK LGMRMLLKS+A LLAPERNVLDAARQSIQLRG L IT CTTRAAS+AA
Sbjct: 548 KGLQRLSSQKGMLGMRMLLKSRAHLLAPERNVLDAARQSIQLRGLLSITPCTTRAASNAA 369
Query: 459 MEGAPSALLTT 427
MEGAPSAL T
Sbjct: 368 MEGAPSALRIT 336
Score = 46.0 bits (94), Expect(3) = 1e-061
Identities = 18/35 (51%), Positives = 21/35 (60%)
Frame = -3 / -3
Query: 345 MTTRRHHRLGHWRRMNKSIDH*AQPQMNNESSCIC 241
+TTRRH G W +SI * P+MNNE CIC
Sbjct: 251 ITTRRHKVPGQWMMKTRSISP*GYPEMNNEPFCIC 147
Score = 40.9 bits (83), Expect(2) = 6e-054
Identities = 20/54 (37%), Positives = 27/54 (50%)
Frame = +1 / +3
Query: 175 NTHDLHW*N*NRTTPQKYIVL*ANARGFIIHLWLCSVINTLVHPPPVTQPVMSS 336
N DL W N +K ANA G +IHLW+ S NT P+T+ ++S
Sbjct: 81 NALDLDWKNSKEARSRKIYCSGANAEGLVIHLWISSRTNTPSLHHPLTRHFVTS 242
Score = 36.3 bits (73), Expect(2) = 2e-032
Identities = 19/51 (37%), Positives = 29/51 (56%)
Frame = -2 / -2
Query: 331 TSQAGSLEEDEQEY*SLSTTTDE**ILLHLPRALCISVAWFDFSFTNGGHV 179
+ AGS+++++ EY*SL + DE* LLHL ++ SF+N V
Sbjct: 237 SQSAGSVDDEDSEY*SLRISRDE*RALLHLHQSSISFCCVLLLSFSNRDQV 85
Score = 32.7 bits (65), Expect(2) = 4e-035
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = +3 / +2
Query: 243 KCKRIHYSSVVVLSDQYXXXXXXXDPA 323
KC+R YSS+ +L D Y DPA
Sbjct: 149 KCRRARYSSLDILKD*YSESSSSTDPA 229
Score = 31.8 bits (63), Expect(3) = 1e-074
Identities = 17/40 (42%), Positives = 21/40 (52%)
Frame = -1 / -1
Query: 293 VLITEHNHR*IMNPLAFA*STMYFCGVVRFQFYQWRSCVF 174
VL+ E R*I +P AFA F F+F+Q RS F
Sbjct: 199 VLVLEDIQR*ITSPSAFAPEQYIFLLRASFEFFQSRSSAF 80
Score = 24.4 bits (47), Expect(3) = 1e-074
Identities = 9/17 (52%), Positives = 11/17 (64%)
Frame = -1 / -2
Query: 158 CCLVSACKRCYL*VRYS 108
C + ACK CY+*V S
Sbjct: 66 CYCLVACKPCYI*VEIS 16
Score = 23.1 bits (44), Expect(3) = 1e-061
Identities = 9/34 (26%), Positives = 20/34 (58%)
Frame = -3 / -3
Query: 201 VLPMEVMCVQRTMILLSCICM*TLLSLSQILYLV 100
V P+E+ C+ + +++ + ++S + LYLV
Sbjct: 107 VFPIEIKCISKDNYVIALSHVNLVISELKYLYLV 6
>gb|AJ462919.1|AJ462919 AJ462919 S00002 Hordeum vulgare subsp. vulgare cDNA clone
S0000200028B08F2, mRNA sequence
Length = 420
Score = 279 bits (604), Expect = 1e-074
Identities = 109/121 (90%), Positives = 113/121 (93%)
Frame = -2 / +1
Query: 661 GSLDKSFEGTPKVVKPERNVGNENATKVSSAFAGTREKCVGCSKTVYPTERVTVNNTMYH 482
GSLDKSFEGTPKVVKPERNVGNENA KVSSAFAGTREKC GCSKTVYP ERVTVNNTMYH
Sbjct: 1 GSLDKSFEGTPKVVKPERNVGNENAIKVSSAFAGTREKCFGCSKTVYPIERVTVNNTMYH 180
Query: 481 KSCFKCCHGGCTISPSNYIAHEGKLYCKHHHIQLIKEKGNFSQLENDHEKTSQAGSLEED 302
KSCFKCCHGGCTISPSNYIAHEGKL+CKHHH QLIKEKGNFSQLENDH+KTSQ+ +D
Sbjct: 181 KSCFKCCHGGCTISPSNYIAHEGKLFCKHHHTQLIKEKGNFSQLENDHDKTSQSAGSVDD 360
Query: 301 E 299
E
Sbjct: 361 E 363
Score = 213 bits (460), Expect(2) = 1e-060
Identities = 84/108 (77%), Positives = 97/108 (89%)
Frame = -1 / +3
Query: 650 QELRRNSQGCQARKKRWE*ECY*SLKRLCWHQREMCWMQQDSLSN*EGHC**HYVPQELL 471
QELRR+S+GCQARK+ WE*ECY*SL+R+CWHQREM WMQQDSLSN*EG+C *H+VPQELL
Sbjct: 12 QELRRDSKGCQARKECWE*ECY*SLERICWHQREMFWMQQDSLSN*EGYCQ*HHVPQELL 191
Query: 470 QVLPWRVHHQPF*LHCARGEAVLQAPPHPADQGEGELQPA*E*PREDI 327
Q+LPWRVHHQPF LH RG+A+LQAPPHPADQ EG+ QPA E R+D+
Sbjct: 192 QMLPWRVHHQPFELHRPRGQALLQAPPHPADQREGKFQPARERSRQDV 335
Score = 190 bits (410), Expect(2) = 8e-051
Identities = 76/103 (73%), Positives = 79/103 (76%)
Frame = +3 / -2
Query: 324 CDVFSWSFSSWLKFPFSLISWMWWCLQYSFPSCAM*LEGLMVHPPWQHLKQLLWYIXXXX 503
CDV S SFSSWLKFPFSLISW+WWCLQ S PS AM* EGLMVHPPWQHLKQLLWY+
Sbjct: 338 CDVLS*SFSSWLKFPFSLISWVWWCLQKSLPSWAM*FEGLMVHPPWQHLKQLLWYMVLLT 159
Query: 504 XXXXXXXXXXXHPTHFSLVPAKALETLVAFSFPTFLSGLTTLG 632
HP HFSLVPA ALETL+AFSFPTFLSGLTT G
Sbjct: 158 VTLSIG*TVLLHPKHFSLVPANALETLIAFSFPTFLSGLTTFG 30
Score = 149 bits (320), Expect(2) = 4e-038
Identities = 63/79 (79%), Positives = 71/79 (89%)
Frame = +2 / -1
Query: 425 NVVRRADGAPSMAALEAALVVHSVINSDPLSWIDCLAASNTFLSGASKGA*DFSSILIPN 604
+V+RRADGAPSMAA EAALVVH VI+S+PL+WIDCLAAS TFLSGASK A DF+SILIPN
Sbjct: 237 DVIRRADGAPSMAAFEAALVVHGVIDSNPLNWIDCLAASKTFLSGASKCARDFNSILIPN 58
Query: 605 VSFWLDNLGSSFEALVQAP 661
+ FWLDNL S FEALV+AP
Sbjct: 57 IPFWLDNLWSPFEALVEAP 1
Score = 134 bits (287), Expect(2) = 8e-035
Identities = 65/78 (83%), Positives = 67/78 (85%)
Frame = -3 / +2
Query: 660 GAWTRASKELPRLSSQKETLGMRMLLKSQAPLLAPERNVLDAARQSIQLRGSLLITLCTT 481
GA TRASK L RLSSQK LGMRMLLKS+A LLAPERNVLDAARQSIQLRG L IT CTT
Sbjct: 2 GASTRASKGLQRLSSQKGMLGMRMLLKSRAHLLAPERNVLDAARQSIQLRGLLSITPCTT 181
Query: 480 RAASSAAMEGAPSALLTT 427
RAAS+AAMEGAPSAL T
Sbjct: 182 RAASNAAMEGAPSALRIT 235
Score = 40.0 bits (81), Expect(2) = 1e-060
Identities = 16/33 (48%), Positives = 19/33 (57%)
Frame = -3 / +2
Query: 345 MTTRRHHRLGHWRRMNKSIDH*AQPQMNNESSC 247
+TTRRH G W +SI * P+MNNE C
Sbjct: 320 ITTRRHKVPGQWMMKTRSISP*GYPEMNNEPFC 418
Score = 33.1 bits (66), Expect(2) = 8e-035
Identities = 14/29 (48%), Positives = 21/29 (72%)
Frame = -2 / +1
Query: 331 TSQAGSLEEDEQEY*SLSTTTDE**ILLH 245
+ AGS+++++ EY*SL + DE* LLH
Sbjct: 334 SQSAGSVDDEDSEY*SLRISRDE*RALLH 420
Score = 30.4 bits (60), Expect(2) = 8e-051
Identities = 11/26 (42%), Positives = 14/26 (53%)
Frame = +3 / -2
Query: 246 CKRIHYSSVVVLSDQYXXXXXXXDPA 323
C+R YSS+ +L D Y DPA
Sbjct: 419 CRRARYSSLDILKD*YSESSSSTDPA 342
Score = 29.0 bits (57), Expect(2) = 4e-038
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = +1 / -3
Query: 247 ARGFIIHLWLCSVINTLVHPPPVTQPVMSS 336
A G +IHLW+ S NT P+T+ ++S
Sbjct: 418 AEGLVIHLWISSRTNTPSLHHPLTRHFVTS 329
>gb|CK125568.1|CK125568 BES1824109b06 BES1824 Hordeum vulgare subsp. vulgare cDNA clone
MPMGp2010B069 5-PRIME, mRNA sequence
Length = 782
Score = 144 bits (310), Expect(2) = 6e-068
Identities = 54/99 (54%), Positives = 69/99 (69%)
Frame = -2 / +3
Query: 934 ASPP*AECVVAEAGRETTAAMATSFQGTTTKCTACDKTVYLVDKLTADNRIYHKACFRCH 755
AS + + RETTA AT F GT KC C KTVY +D+L+ D ++H+ACF+CH
Sbjct: 12 ASGAGGQAEIRSGERETTATAATMFSGTQQKCKVCTKTVYPMDQLSTDGAVFHRACFKCH 191
Query: 754 HCKGTLKLANYNSFEGVLYCRPHFDQLFKRTGSLDKSFE 638
HCK TL ++Y+SFEGV YC+PHF QLFK TGS +KSF+
Sbjct: 192 HCKSTLSFSSYSSFEGVPYCKPHFAQLFKETGSYNKSFQ 308
Score = 133 bits (285), Expect(2) = 6e-068
Identities = 48/79 (60%), Positives = 58/79 (73%)
Frame = -2 / +3
Query: 586 TKVSSAFAGTREKCVGCSKTVYPTERVTVNNTMYHKSCFKCCHGGCTISPSNYIAHEGKL 407
+K + F+GT++KC C KT YP E+VTV YHKSCFKC HGGC +SPSNY A EG L
Sbjct: 369 SKAAGMFSGTQDKCATCGKTAYPLEKVTVEEKSYHKSCFKCSHGGCALSPSNYAALEGIL 548
Query: 406 YCKHHHIQLIKEKGNFSQL 350
YCKHH QL KEKG+++ L
Sbjct: 549 YCKHHFSQLFKEKGSYNHL 605
Score = 71.2 bits (149), Expect(2) = 3e-022
Identities = 39/74 (52%), Positives = 41/74 (55%)
Frame = +3 / -2
Query: 672 NSWSK*GLQ*STPSKEL*LASLRVPLQWWQRKQALW*MRLSAVSLSTRYTVLSQAVHLVV 851
NS +K GLQ* TPS E *L RV LQWW KQA W S S S TVL +H
Sbjct: 274 NSCAKWGLQ*GTPSNEE*LLKERVDLQWWHLKQARWKTAPSVESWSMG*TVLVHTLHFCC 95
Query: 852 VPWKEVAMAAVVSL 893
VP VA AVVSL
Sbjct: 94 VPLNMVAAVAVVSL 53
Score = 57.0 bits (118), Expect(2) = 3e-022
Identities = 26/44 (59%), Positives = 27/44 (61%)
Frame = +3 / -2
Query: 354 WLKFPFSLISWMWWCLQYSFPSCAM*LEGLMVHPPWQHLKQLLW 485
WL PFSL S WCLQ PS A *LEG PP +HLKQ LW
Sbjct: 601 WL*LPFSLKSCEKWCLQ*RMPSKAA*LEGERAQPP*EHLKQDLW 470
>gb|BQ765063.1|BQ765063 EBca01_SQ005_N18_R carpel, pre-anthesis, no treatment, cv Optic,
EBca01 Hordeum vulgare subsp. vulgare cDNA clone
EBca01_SQ005_N18 5', mRNA sequence
Length = 716
Score = 144 bits (310), Expect(2) = 6e-068
Identities = 54/99 (54%), Positives = 69/99 (69%)
Frame = -2 / +1
Query: 934 ASPP*AECVVAEAGRETTAAMATSFQGTTTKCTACDKTVYLVDKLTADNRIYHKACFRCH 755
AS + + RETTA AT F GT KC C KTVY +D+L+ D ++H+ACF+CH
Sbjct: 4 ASGAGGQAEIRSGERETTATAATMFSGTQQKCKVCTKTVYPMDQLSTDGAVFHRACFKCH 183
Query: 754 HCKGTLKLANYNSFEGVLYCRPHFDQLFKRTGSLDKSFE 638
HCK TL ++Y+SFEGV YC+PHF QLFK TGS +KSF+
Sbjct: 184 HCKSTLSFSSYSSFEGVPYCKPHFAQLFKETGSYNKSFQ 300
Score = 133 bits (285), Expect(2) = 6e-068
Identities = 48/79 (60%), Positives = 58/79 (73%)
Frame = -2 / +1
Query: 586 TKVSSAFAGTREKCVGCSKTVYPTERVTVNNTMYHKSCFKCCHGGCTISPSNYIAHEGKL 407
+K + F+GT++KC C KT YP E+VTV YHKSCFKC HGGC +SPSNY A EG L
Sbjct: 361 SKAAGMFSGTQDKCATCGKTAYPLEKVTVEEKSYHKSCFKCSHGGCALSPSNYAALEGIL 540
Query: 406 YCKHHHIQLIKEKGNFSQL 350
YCKHH QL KEKG+++ L
Sbjct: 541 YCKHHFSQLFKEKGSYNHL 597
Score = 71.2 bits (149), Expect(2) = 2e-022
Identities = 39/74 (52%), Positives = 41/74 (55%)
Frame = +3 / -1
Query: 672 NSWSK*GLQ*STPSKEL*LASLRVPLQWWQRKQALW*MRLSAVSLSTRYTVLSQAVHLVV 851
NS +K GLQ* TPS E *L RV LQWW KQA W S S S TVL +H
Sbjct: 266 NSCAKWGLQ*GTPSNEE*LLKERVDLQWWHLKQARWKTAPSVESWSMG*TVLVHTLHFCC 87
Query: 852 VPWKEVAMAAVVSL 893
VP VA AVVSL
Sbjct: 86 VPLNMVAAVAVVSL 45
Score = 57.0 bits (118), Expect(2) = 2e-022
Identities = 26/44 (59%), Positives = 27/44 (61%)
Frame = +3 / -1
Query: 354 WLKFPFSLISWMWWCLQYSFPSCAM*LEGLMVHPPWQHLKQLLW 485
WL PFSL S WCLQ PS A *LEG PP +HLKQ LW
Sbjct: 593 WL*LPFSLKSCEKWCLQ*RMPSKAA*LEGERAQPP*EHLKQDLW 462
>gb|CK123865.1|CK123865 BES1824105n21 BES1824 Hordeum vulgare subsp. vulgare cDNA clone
MPMGp2010N215 5-PRIME, mRNA sequence
Length = 823
Score = 144 bits (310), Expect(2) = 8e-068
Identities = 54/99 (54%), Positives = 69/99 (69%)
Frame = -2 / +1
Query: 934 ASPP*AECVVAEAGRETTAAMATSFQGTTTKCTACDKTVYLVDKLTADNRIYHKACFRCH 755
AS + + RETTA AT F GT KC C KTVY +D+L+ D ++H+ACF+CH
Sbjct: 4 ASGAGGQAEIRSGERETTATAATMFSGTQQKCKVCTKTVYPMDQLSTDGAVFHRACFKCH 183
Query: 754 HCKGTLKLANYNSFEGVLYCRPHFDQLFKRTGSLDKSFE 638
HCK TL ++Y+SFEGV YC+PHF QLFK TGS +KSF+
Sbjct: 184 HCKSTLSFSSYSSFEGVPYCKPHFAQLFKETGSYNKSFQ 300
Score = 133 bits (284), Expect(2) = 8e-068
Identities = 48/79 (60%), Positives = 57/79 (72%)
Frame = -2 / +1
Query: 586 TKVSSAFAGTREKCVGCSKTVYPTERVTVNNTMYHKSCFKCCHGGCTISPSNYIAHEGKL 407
+K + F+GT++KC C KT YP E+VTV YHKSCFKC HGGC +SPSNY A EG L
Sbjct: 361 SKAAGMFSGTQDKCATCGKTAYPLEKVTVEEKSYHKSCFKCSHGGCALSPSNYAALEGIL 540
Query: 406 YCKHHHIQLIKEKGNFSQL 350
YCKHH QL KEKG++ L
Sbjct: 541 YCKHHFSQLFKEKGSYXHL 597
Score = 71.2 bits (149), Expect(2) = 1e-021
Identities = 39/74 (52%), Positives = 41/74 (55%)
Frame = +3 / -3
Query: 672 NSWSK*GLQ*STPSKEL*LASLRVPLQWWQRKQALW*MRLSAVSLSTRYTVLSQAVHLVV 851
NS +K GLQ* TPS E *L RV LQWW KQA W S S S TVL +H
Sbjct: 266 NSCAKWGLQ*GTPSNEE*LLKERVDLQWWHLKQARWKTAPSVESWSMG*TVLVHTLHFCC 87
Query: 852 VPWKEVAMAAVVSL 893
VP VA AVVSL
Sbjct: 86 VPLNMVAAVAVVSL 45
Score = 54.7 bits (113), Expect(2) = 1e-021
Identities = 25/44 (56%), Positives = 26/44 (59%)
Frame = +3 / -3
Query: 354 WLKFPFSLISWMWWCLQYSFPSCAM*LEGLMVHPPWQHLKQLLW 485
W PFSL S WCLQ PS A *LEG PP +HLKQ LW
Sbjct: 593 WX*LPFSLKSCEKWCLQ*RMPSKAA*LEGERAQPP*EHLKQDLW 462
>gb|CA025095.1|CA025095 HZ51D05r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ51D05
5-PRIME, mRNA sequence
Length = 587
Score = 144 bits (309), Expect(2) = 8e-068
Identities = 52/85 (61%), Positives = 65/85 (76%)
Frame = -2 / +1
Query: 892 RETTAAMATSFQGTTTKCTACDKTVYLVDKLTADNRIYHKACFRCHHCKGTLKLANYNSF 713
RETTA AT F GT KC C KTVY +D+L+ D ++H+ACF+CHHCK TL ++Y+SF
Sbjct: 25 RETTATAATMFSGTQQKCKVCTKTVYPMDQLSTDGAVFHRACFKCHHCKSTLSFSSYSSF 204
Query: 712 EGVLYCRPHFDQLFKRTGSLDKSFE 638
EGV YC+PHF QLFK TGS +KSF+
Sbjct: 205 EGVPYCKPHFAQLFKETGSYNKSFQ 279
Score = 133 bits (285), Expect(2) = 8e-068
Identities = 48/79 (60%), Positives = 58/79 (73%)
Frame = -2 / +1
Query: 586 TKVSSAFAGTREKCVGCSKTVYPTERVTVNNTMYHKSCFKCCHGGCTISPSNYIAHEGKL 407
+K + F+GT++KC C KT YP E+VTV YHKSCFKC HGGC +SPSNY A EG L
Sbjct: 340 SKAAGMFSGTQDKCATCGKTAYPLEKVTVEEKSYHKSCFKCSHGGCALSPSNYAALEGIL 519
Query: 406 YCKHHHIQLIKEKGNFSQL 350
YCKHH QL KEKG+++ L
Sbjct: 520 YCKHHFSQLFKEKGSYNHL 576
Score = 71.2 bits (149), Expect(2) = 2e-022
Identities = 39/74 (52%), Positives = 41/74 (55%)
Frame = +3 / -1
Query: 672 NSWSK*GLQ*STPSKEL*LASLRVPLQWWQRKQALW*MRLSAVSLSTRYTVLSQAVHLVV 851
NS +K GLQ* TPS E *L RV LQWW KQA W S S S TVL +H
Sbjct: 245 NSCAKWGLQ*GTPSNEE*LLKERVDLQWWHLKQARWKTAPSVESWSMG*TVLVHTLHFCC 66
Query: 852 VPWKEVAMAAVVSL 893
VP VA AVVSL
Sbjct: 65 VPLNMVAAVAVVSL 24
Score = 57.0 bits (118), Expect(2) = 2e-022
Identities = 26/44 (59%), Positives = 27/44 (61%)
Frame = +3 / -1
Query: 354 WLKFPFSLISWMWWCLQYSFPSCAM*LEGLMVHPPWQHLKQLLW 485
WL PFSL S WCLQ PS A *LEG PP +HLKQ LW
Sbjct: 572 WL*LPFSLKSCEKWCLQ*RMPSKAA*LEGERAQPP*EHLKQDLW 441
>gb|AL505296.1|AL505296 AL505296 Hordeum vulgare Barke roots Hordeum vulgare subsp. vulgare
cDNA clone HW08A11V 5', mRNA sequence
Length = 689
Score = 141 bits (303), Expect(2) = 5e-067
Identities = 51/85 (60%), Positives = 64/85 (75%)
Frame = -2 / +2
Query: 892 RETTAAMATSFQGTTTKCTACDKTVYLVDKLTADNRIYHKACFRCHHCKGTLKLANYNSF 713
R TTA AT F GT KC C KTVY +D+L+ D ++H+ACF+CHHCK TL ++Y+SF
Sbjct: 5 RXTTATAATMFSGTQQKCKVCTKTVYPMDQLSTDGAVFHRACFKCHHCKSTLSFSSYSSF 184
Query: 712 EGVLYCRPHFDQLFKRTGSLDKSFE 638
EGV YC+PHF QLFK TGS +KSF+
Sbjct: 185 EGVPYCKPHFAQLFKETGSYNKSFQ 259
Score = 133 bits (285), Expect(2) = 5e-067
Identities = 48/79 (60%), Positives = 58/79 (73%)
Frame = -2 / +2
Query: 586 TKVSSAFAGTREKCVGCSKTVYPTERVTVNNTMYHKSCFKCCHGGCTISPSNYIAHEGKL 407
+K + F+GT++KC C KT YP E+VTV YHKSCFKC HGGC +SPSNY A EG L
Sbjct: 320 SKAAGMFSGTQDKCATCGKTAYPLEKVTVEEKSYHKSCFKCSHGGCALSPSNYAALEGIL 499
Query: 406 YCKHHHIQLIKEKGNFSQL 350
YCKHH QL KEKG+++ L
Sbjct: 500 YCKHHFSQLFKEKGSYNHL 556
Score = 71.2 bits (149), Expect(2) = 2e-022
Identities = 39/74 (52%), Positives = 41/74 (55%)
Frame = +3 / -3
Query: 672 NSWSK*GLQ*STPSKEL*LASLRVPLQWWQRKQALW*MRLSAVSLSTRYTVLSQAVHLVV 851
NS +K GLQ* TPS E *L RV LQWW KQA W S S S TVL +H
Sbjct: 225 NSCAKWGLQ*GTPSNEE*LLKERVDLQWWHLKQARWKTAPSVESWSMG*TVLVHTLHFCC 46
Query: 852 VPWKEVAMAAVVSL 893
VP VA AVVSL
Sbjct: 45 VPLNMVAAVAVVSL 4
Score = 57.0 bits (118), Expect(2) = 2e-022
Identities = 26/44 (59%), Positives = 27/44 (61%)
Frame = +3 / -3
Query: 354 WLKFPFSLISWMWWCLQYSFPSCAM*LEGLMVHPPWQHLKQLLW 485
WL PFSL S WCLQ PS A *LEG PP +HLKQ LW
Sbjct: 552 WL*LPFSLKSCEKWCLQ*RMPSKAA*LEGERAQPP*EHLKQDLW 421
>gb|AV926936.1|AV926936 AV926936 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp.
vulgare cDNA clone basd26c07 5', mRNA sequence
Length = 733
Score = 144 bits (310), Expect(2) = 1e-063
Identities = 54/99 (54%), Positives = 69/99 (69%)
Frame = -2 / +2
Query: 934 ASPP*AECVVAEAGRETTAAMATSFQGTTTKCTACDKTVYLVDKLTADNRIYHKACFRCH 755
AS + + RETTA AT F GT KC C KTVY +D+L+ D ++H+ACF+CH
Sbjct: 146 ASGAGGQAEIRSGERETTATAATMFSGTQQKCKVCTKTVYPMDQLSTDGAVFHRACFKCH 325
Query: 754 HCKGTLKLANYNSFEGVLYCRPHFDQLFKRTGSLDKSFE 638
HCK TL ++Y+SFEGV YC+PHF QLFK TGS +KSF+
Sbjct: 326 HCKSTLSFSSYSSFEGVPYCKPHFAQLFKETGSYNKSFQ 442
Score = 119 bits (254), Expect(2) = 1e-063
Identities = 43/71 (60%), Positives = 50/71 (70%)
Frame = -2 / +2
Query: 586 TKVSSAFAGTREKCVGCSKTVYPTERVTVNNTMYHKSCFKCCHGGCTISPSNYIAHEGKL 407
+K + F+GT++KC C KT YP E+VTV YHKSCFKC HGGC +SP NY A EG L
Sbjct: 503 SKAAGMFSGTQDKCATCGKTAYPLEKVTVEEKSYHKSCFKCSHGGCALSPFNYAALEGIL 682
Query: 406 YCKHHHIQLIK 374
YCKHH QL K
Sbjct: 683 YCKHHFSQLFK 715
>gb|BJ463541.1|BJ463541 BJ463541 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags32g17 5', mRNA sequence
Length = 604
Score = 133 bits (285), Expect(2) = 1e-062
Identities = 48/79 (60%), Positives = 58/79 (73%)
Frame = -2 / +3
Query: 586 TKVSSAFAGTREKCVGCSKTVYPTERVTVNNTMYHKSCFKCCHGGCTISPSNYIAHEGKL 407
+K + F+GT++KC C KT YP E+VTV YHKSCFKC HGGC +SPSNY A EG L
Sbjct: 333 SKAAGMFSGTQDKCATCGKTAYPLEKVTVEEKSYHKSCFKCSHGGCALSPSNYAALEGIL 512
Query: 406 YCKHHHIQLIKEKGNFSQL 350
YCKHH QL KEKG+++ L
Sbjct: 513 YCKHHFSQLFKEKGSYNHL 569
Score = 127 bits (272), Expect(2) = 1e-062
Identities = 44/73 (60%), Positives = 57/73 (78%)
Frame = -2 / +3
Query: 856 GTTTKCTACDKTVYLVDKLTADNRIYHKACFRCHHCKGTLKLANYNSFEGVLYCRPHFDQ 677
GT KC C KTVY +D+L+ D ++H+ACF+CHHCK TL ++Y+SFEGV YC+PHF Q
Sbjct: 54 GTQQKCKVCTKTVYPMDQLSTDGAVFHRACFKCHHCKSTLSFSSYSSFEGVPYCKPHFAQ 233
Query: 676 LFKRTGSLDKSFE 638
LFK TGS +KSF+
Sbjct: 234 LFKETGSYNKSFQ 272
>gb|BI950605.1|BI950605 HVSMEl0021J24f Hordeum vulgare spike EST library HVcDNA0012
(Fusarium infected) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEl0021J24f, mRNA sequence
Length = 865
Score = 142 bits (305), Expect(2) = 2e-062
Identities = 53/99 (53%), Positives = 68/99 (68%)
Frame = -2 / +1
Query: 934 ASPP*AECVVAEAGRETTAAMATSFQGTTTKCTACDKTVYLVDKLTADNRIYHKACFRCH 755
AS + + RETTA AT F GT KC C KTVY +D++ D ++H+ACF+CH
Sbjct: 34 ASGAGGQAEIRSGERETTATAATMFSGTQQKCKVCTKTVYPMDQVCTDGAVFHRACFKCH 213
Query: 754 HCKGTLKLANYNSFEGVLYCRPHFDQLFKRTGSLDKSFE 638
HCK TL ++Y+SFEGV YC+PHF QLFK TGS +KSF+
Sbjct: 214 HCKSTLSFSSYSSFEGVPYCKPHFAQLFKETGSYNKSFQ 330
Score = 116 bits (249), Expect(2) = 2e-062
Identities = 43/87 (49%), Positives = 56/87 (64%)
Frame = -2 / +1
Query: 586 TKVSSAFAGTREKCVGCSKTVYPTERVTVNNTMYHKSCFKCCHGGCTISPSNYIAHEGKL 407
+K + F+GT++KC C KT YP E+VTV YHKSCFKC HGGC +S SNY A L
Sbjct: 391 SKAAGMFSGTQDKCATCGKTAYPLEKVTVEEKSYHKSCFKCSHGGCALSASNYAAFGSIL 570
Query: 406 YCKHHHIQLIKEKGNFSQLENDHEKTS 326
YCK H QL +EKG++ + ++S
Sbjct: 571 YCKPHFSQLFREKGSYQHSDQVRLRSS 651
>gb|BG300145.1|BG300145 HVSMEb0010G24f Hordeum vulgare seedling shoot EST library
HVcDNA0002 (Dehydration stress) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEb0010G24f, mRNA sequence
Length = 517
Score = 137 bits (294), Expect(2) = 6e-062
Identities = 49/82 (59%), Positives = 62/82 (75%)
Frame = -2 / +3
Query: 883 TAAMATSFQGTTTKCTACDKTVYLVDKLTADNRIYHKACFRCHHCKGTLKLANYNSFEGV 704
TA AT F GT KC C KTVY +D+L+ D ++H+ACF+CHHCK TL ++Y+SFEGV
Sbjct: 3 TATAATMFSGTQQKCKVCTKTVYPMDQLSTDGAVFHRACFKCHHCKSTLSFSSYSSFEGV 182
Query: 703 LYCRPHFDQLFKRTGSLDKSFE 638
YC+PHF QLFK TGS +KSF+
Sbjct: 183 PYCKPHFAQLFKETGSYNKSFQ 248
Score = 120 bits (257), Expect(2) = 6e-062
Identities = 43/69 (62%), Positives = 50/69 (72%)
Frame = -2 / +3
Query: 586 TKVSSAFAGTREKCVGCSKTVYPTERVTVNNTMYHKSCFKCCHGGCTISPSNYIAHEGKL 407
+K + F+GT++KC C KT YP E+VTV YHKSCFKC HGGC +SPSNY A EG L
Sbjct: 309 SKAAGMFSGTQDKCATCGKTAYPLEKVTVEEKSYHKSCFKCSHGGCALSPSNYAAXEGIL 488
Query: 406 YCKHHHIQL 380
YCKHH QL
Sbjct: 489 YCKHHFSQL 515
>gb|BM369644.2|BM369644 EBem07_SQ004_D10_R embryo, 28 DPA, no treatment, cv Optic, EBem07
Hordeum vulgare subsp. vulgare cDNA clone
EBem07_SQ004_D10 5', mRNA sequence
Length = 512
Score = 135 bits (289), Expect(2) = 6e-061
Identities = 48/81 (59%), Positives = 61/81 (75%)
Frame = -2 / +1
Query: 880 AAMATSFQGTTTKCTACDKTVYLVDKLTADNRIYHKACFRCHHCKGTLKLANYNSFEGVL 701
A AT F GT KC C KTVY +D+L+ D ++H+ACF+CHHCK TL ++Y+SFEGV
Sbjct: 1 ATAATMFSGTQQKCKVCTKTVYPMDQLSTDGAVFHRACFKCHHCKSTLSFSSYSSFEGVP 180
Query: 700 YCRPHFDQLFKRTGSLDKSFE 638
YC+PHF QLFK TGS +KSF+
Sbjct: 181 YCKPHFAQLFKETGSYNKSFQ 243
Score = 119 bits (255), Expect(2) = 6e-061
Identities = 43/69 (62%), Positives = 50/69 (72%)
Frame = -2 / +1
Query: 586 TKVSSAFAGTREKCVGCSKTVYPTERVTVNNTMYHKSCFKCCHGGCTISPSNYIAHEGKL 407
+K + F+GT++KC C KT YP E+VTV YHKSCFKC HGGC +SPSNY A EG L
Sbjct: 304 SKAAGMFSGTQDKCATCGKTAYPLEKVTVEEKSYHKSCFKCSHGGCALSPSNYAALEGIL 483
Query: 406 YCKHHHIQL 380
YCKHH QL
Sbjct: 484 YCKHHFSQL 510
>gb|BM442006.2|BM442006 EBan01_SQ001_K04_R anther, yellow stage, no treatment, cv Optic,
EBan01 Hordeum vulgare subsp. vulgare cDNA clone
EBan01_SQ001_K04 5', mRNA sequence
Length = 647
Score = 133 bits (286), Expect(2) = 8e-061
Identities = 51/97 (52%), Positives = 63/97 (64%)
Frame = -2 / +3
Query: 931 SPP*AECVVAEAGRETTAAMATSFQGTTTKCTACDKTVYLVDKLTADNRIYHKACFRCHH 752
+P * E + + A + SF GT KC CDKTV+ +D LTAD YHK CF+C H
Sbjct: 48 APE*KEARASSLLGRSPARITMSFTGTQDKCKTCDKTVHFIDLLTADGVSYHKTCFKCSH 227
Query: 751 CKGTLKLANYNSFEGVLYCRPHFDQLFKRTGSLDKSF 641
CKGTL + NY+S +GVLYC+ HF+QLFK TGS K F
Sbjct: 228 CKGTLSMCNYSSMDGVLYCKTHFEQLFKETGSFSKKF 338
Score = 120 bits (257), Expect(2) = 8e-061
Identities = 43/79 (54%), Positives = 58/79 (73%)
Frame = -2 / +3
Query: 586 TKVSSAFAGTREKCVGCSKTVYPTERVTVNNTMYHKSCFKCCHGGCTISPSNYIAHEGKL 407
+K+SSAF+GT++KC C KTVYP E++++ YHK CFKC HGGC ++ S+Y A G L
Sbjct: 384 SKMSSAFSGTQDKCAACQKTVYPLEKLSLEGECYHKGCFKCSHGGCILTTSSYAALNGIL 563
Query: 406 YCKHHHIQLIKEKGNFSQL 350
YCK H QL KEKG+++ L
Sbjct: 564 YCKIHFSQLFKEKGSYNHL 620
>gb|BQ753427.1|BQ753427 EBan01_SQ004_D21_R anther, yellow stage, no treatment, cv Optic,
EBan01 Hordeum vulgare subsp. vulgare cDNA clone
EBan01_SQ004_D21 5', mRNA sequence
Length = 633
Score = 129 bits (277), Expect(2) = 3e-059
Identities = 46/75 (61%), Positives = 57/75 (76%)
Frame = -2 / +2
Query: 865 SFQGTTTKCTACDKTVYLVDKLTADNRIYHKACFRCHHCKGTLKLANYNSFEGVLYCRPH 686
SF GT KC+AC+KTV+ +D LTAD IYHK CF+C HCKG L + +Y+S +GVLYC+ H
Sbjct: 71 SFTGTQDKCSACEKTVHFIDLLTADGVIYHKTCFKCSHCKGILSMCSYSSMDGVLYCKTH 250
Query: 685 FDQLFKRTGSLDKSF 641
F+QLFK TGS K F
Sbjct: 251 FEQLFKETGSFSKKF 295
Score = 119 bits (255), Expect(2) = 3e-059
Identities = 42/80 (52%), Positives = 60/80 (75%)
Frame = -2 / +2
Query: 586 TKVSSAFAGTREKCVGCSKTVYPTERVTVNNTMYHKSCFKCCHGGCTISPSNYIAHEGKL 407
+K+S+AF+GT++KC C+KTVYP E++T+ YHKSCFKC HGGC ++ S+Y A G L
Sbjct: 344 SKLSAAFSGTQDKCAACTKTVYPLEKMTLEGDAYHKSCFKCSHGGCILTTSSYAALNGVL 523
Query: 406 YCKHHHIQLIKEKGNFSQLE 347
YCK H QL E+G++S ++
Sbjct: 524 YCKIHFGQLFMERGSYSHMK 583
Score = 71.6 bits (150), Expect(2) = 2e-026
Identities = 34/90 (37%), Positives = 42/90 (46%)
Frame = +3 / -1
Query: 345 FSSWLKFPFSLISWMWWCLQYSFPSCAM*LEGLMVHPPWQHLKQLLWYIXXXXXXXXXXX 524
F WL P S+ S W LQY P A * E + + PPW+HLKQLLWY
Sbjct: 585 FFMWL*LPLSMNSCPKWILQYKTPLRAA*EEVVRMQPPWEHLKQLLWYASPSRVIFSSGY 406
Query: 525 XXXXHPTHFSLVPAKALETLVAFSFPTFLS 614
H S VP KA ++L+ + LS
Sbjct: 405 TVFVQAAHLS*VPEKAADSLLGALVSSLLS 316
Score = 68.0 bits (142), Expect(2) = 2e-026
Identities = 36/65 (55%), Positives = 41/65 (63%)
Frame = +3 / -1
Query: 675 SWSK*GLQ*STPSKEL*LASLRVPLQWWQRKQALW*MRLSAVSLSTRYTVLSQAVHLVVV 854
S SK LQ* TPS E *L R+PLQW KQ LW*M SAV S ++TV S A HL V
Sbjct: 261 SCSKCVLQ*RTPSMEE*LHIERIPLQWLHLKQVLW*MTPSAVRRSMKWTVFSHAEHLSCV 82
Query: 855 PWKEV 869
P K++
Sbjct: 81 PVKDM 67
>gb|BI950704.1|BI950704 HVSMEl0022M04f Hordeum vulgare spike EST library HVcDNA0012
(Fusarium infected) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEl0022M04f, mRNA sequence
Length = 942
Score = 227 bits (490), Expect = 8e-059
Identities = 92/116 (79%), Positives = 97/116 (83%)
Frame = -2 / +2
Query: 829 DKTVYLVDKLTADNRIYHKACFRCHHCKGTLKLANYNSFEGVLYCRPHFDQLFKRTGSLD 650
DKTVYLVDKLTADNR+YHKACFRCHHCKGTLKLANYNSFEGVLYCRPHFDQLFKRTGSLD
Sbjct: 2 DKTVYLVDKLTADNRVYHKACFRCHHCKGTLKLANYNSFEGVLYCRPHFDQLFKRTGSLD 181
Query: 649 KSFEGTPKVVKPERNVGNENATKVSSAFAGTREKCVGCSKTVYPTERVTVNNTMYH 482
KSFEGTPKVVKP+ NVGNENA KVS+AFAGT EK C +R T + H
Sbjct: 182 KSFEGTPKVVKPQSNVGNENAIKVSNAFAGTPEKWSRCPHDRLSIDRATEDYPTCH 349
Score = 150 bits (323), Expect = 8e-036
Identities = 70/98 (71%), Positives = 71/98 (72%)
Frame = +3 / -1
Query: 537 HPTHFSLVPAKALETLVAFSFPTFLSGLTTLGXXXXXXXXXXXXXNSWSK*GLQ*STPSK 716
H HFS VPA ALETL+AFS PTF GLTT G SWSK*GLQ*STPS
Sbjct: 294 HRDHFSGVPANALETLIAFSLPTFDCGLTTFGVPSKLLSRLPVLLKSWSK*GLQ*STPSN 115
Query: 717 EL*LASLRVPLQWWQRKQALW*MRLSAVSLSTRYTVLS 830
EL* ASLRVPLQWW KQALW* RLSAVSLSTRYTVLS
Sbjct: 114 EL*FASLRVPLQWWHLKQALW*TRLSAVSLSTRYTVLS 1
Score = 102 bits (217), Expect(2) = 9e-024
Identities = 47/77 (61%), Positives = 58/77 (75%)
Frame = -1 / +1
Query: 734 ARQLQLLRGSALLQASLRPAVQEDRELGQELRRNSQGCQARKKRWE*ECY*SLKRLCWHQ 555
AR+LQL+R ALLQASL PA+QED E QELRR+S+GCQA + W+*ECY*SL+R+ WH
Sbjct: 97 ARELQLVRRGALLQASL*PALQEDWEPRQELRRDSKGCQATIECWQ*ECY*SLQRIRWHP 276
Query: 554 REMCWMQQDSLSN*EGH 504
REM M +*+GH
Sbjct: 277 REMVSMPPRPPIH*QGH 327
Score = 28.1 bits (55), Expect(2) = 9e-024
Identities = 11/13 (84%), Positives = 11/13 (84%)
Frame = -1 / +1
Query: 830 RQDGVPCGQAHRR 792
RQDGVP QAHRR
Sbjct: 1 RQDGVPRRQAHRR 39
>gb|BQ753289.1|BQ753289 EBan01_SQ001_D10_R anther, yellow stage, no treatment, cv Optic,
EBan01 Hordeum vulgare subsp. vulgare cDNA clone
EBan01_SQ001_D10 5', mRNA sequence
Length = 634
Score = 133 bits (286), Expect(2) = 9e-059
Identities = 51/97 (52%), Positives = 63/97 (64%)
Frame = -2 / +3
Query: 931 SPP*AECVVAEAGRETTAAMATSFQGTTTKCTACDKTVYLVDKLTADNRIYHKACFRCHH 752
+P * E + + A + SF GT KC CDKTV+ +D LTAD YHK CF+C H
Sbjct: 54 APE*KEARASSLLGRSPARITMSFTGTQDKCKTCDKTVHFIDLLTADGVSYHKTCFKCSH 233
Query: 751 CKGTLKLANYNSFEGVLYCRPHFDQLFKRTGSLDKSF 641
CKGTL + NY+S +GVLYC+ HF+QLFK TGS K F
Sbjct: 234 CKGTLSMCNYSSMDGVLYCKTHFEQLFKETGSFSKKF 344
Score = 113 bits (242), Expect(2) = 9e-059
Identities = 41/79 (51%), Positives = 57/79 (72%)
Frame = -2 / +3
Query: 586 TKVSSAFAGTREKCVGCSKTVYPTERVTVNNTMYHKSCFKCCHGGCTISPSNYIAHEGKL 407
+K+SSAF+GT++KC C KTVYP E++++ YHK CFKC HGGC ++ S+Y A G L
Sbjct: 390 SKMSSAFSGTQDKCAACQKTVYPLEKLSLEGECYHKGCFKCSHGGCILTTSSYAALNGIL 569
Query: 406 YCKHHHIQLIKEKGNFSQL 350
Y + H QL KEKG+++ L
Sbjct: 570 YWQIHFSQLFKEKGSYNHL 626
>gb|CA032315.1|CA032315 HX12K14r HX Hordeum vulgare subsp. vulgare cDNA clone HX12K14
5-PRIME, mRNA sequence
Length = 666
Score = 144 bits (310), Expect(2) = 8e-058
Identities = 54/99 (54%), Positives = 69/99 (69%)
Frame = -2 / +1
Query: 934 ASPP*AECVVAEAGRETTAAMATSFQGTTTKCTACDKTVYLVDKLTADNRIYHKACFRCH 755
AS + + RETTA AT F GT KC C KTVY +D+L+ D ++H+ACF+CH
Sbjct: 136 ASGAGGQAEIRSGERETTATAATMFSGTQQKCKVCTKTVYPMDQLSTDGAVFHRACFKCH 315
Query: 754 HCKGTLKLANYNSFEGVLYCRPHFDQLFKRTGSLDKSFE 638
HCK TL ++Y+SFEGV YC+PHF QLFK TGS +KSF+
Sbjct: 316 HCKSTLSFSSYSSFEGVPYCKPHFAQLFKETGSYNKSFQ 432
Score = 99.6 bits (211), Expect(2) = 8e-058
Identities = 35/58 (60%), Positives = 42/58 (72%)
Frame = -2 / +1
Query: 586 TKVSSAFAGTREKCVGCSKTVYPTERVTVNNTMYHKSCFKCCHGGCTISPSNYIAHEG 413
+K + F+GT++KC C KT YP E+VTV YHKSCFKC HGGC +SPSNY A EG
Sbjct: 493 SKAAGMFSGTQDKCATCGKTAYPLEKVTVEEKSYHKSCFKCSHGGCALSPSNYAALEG 666
>gb|BM377129.2|BM377129 EBem05_SQ004_D11_R embryo, 14 DPA, no treatment, cv Optic, EBem05
Hordeum vulgare subsp. vulgare cDNA clone
EBem05_SQ004_D11 5', mRNA sequence
Length = 625
Score = 144 bits (310), Expect(2) = 3e-056
Identities = 54/99 (54%), Positives = 69/99 (69%)
Frame = -2 / +3
Query: 934 ASPP*AECVVAEAGRETTAAMATSFQGTTTKCTACDKTVYLVDKLTADNRIYHKACFRCH 755
AS + + RETTA AT F GT KC C KTVY +D+L+ D ++H+ACF+CH
Sbjct: 105 ASGAGGQAEIRSGERETTATAATMFSGTQQKCKVCTKTVYPMDQLSTDGAVFHRACFKCH 284
Query: 754 HCKGTLKLANYNSFEGVLYCRPHFDQLFKRTGSLDKSFE 638
HCK TL ++Y+SFEGV YC+PHF QLFK TGS +KSF+
Sbjct: 285 HCKSTLSFSSYSSFEGVPYCKPHFAQLFKETGSYNKSFQ 401
Score = 94.5 bits (200), Expect(2) = 3e-056
Identities = 32/53 (60%), Positives = 39/53 (73%)
Frame = -2 / +3
Query: 586 TKVSSAFAGTREKCVGCSKTVYPTERVTVNNTMYHKSCFKCCHGGCTISPSNY 428
+K + F+GT++KC C KT YP E+VTV YHKSCFKC HGGC +SPSNY
Sbjct: 462 SKAAGMFSGTQDKCATCGKTAYPLEKVTVEEKSYHKSCFKCSHGGCALSPSNY 620
>gb|BM372397.2|BM372397 EBro03_SQ004_N12_R root, 3 week, waterlogged, cv Optic, EBro03
Hordeum vulgare subsp. vulgare cDNA clone
EBro03_SQ004_N12 5', mRNA sequence
Length = 581
Score = 133 bits (285), Expect(2) = 3e-055
Identities = 48/79 (60%), Positives = 58/79 (73%)
Frame = -2 / +2
Query: 586 TKVSSAFAGTREKCVGCSKTVYPTERVTVNNTMYHKSCFKCCHGGCTISPSNYIAHEGKL 407
+K + F+GT++KC C KT YP E+VTV YHKSCFKC HGGC +SPSNY A EG L
Sbjct: 230 SKAAGMFSGTQDKCATCGKTAYPLEKVTVEEKSYHKSCFKCSHGGCALSPSNYAALEGIL 409
Query: 406 YCKHHHIQLIKEKGNFSQL 350
YCKHH QL KEKG+++ L
Sbjct: 410 YCKHHFSQLFKEKGSYNHL 466
Score = 102 bits (217), Expect(2) = 3e-055
Identities = 34/56 (60%), Positives = 46/56 (82%)
Frame = -2 / +2
Query: 805 KLTADNRIYHKACFRCHHCKGTLKLANYNSFEGVLYCRPHFDQLFKRTGSLDKSFE 638
+L+ D ++H+ACF+CHHCK TL ++Y+SFEGV YC+PHF QLFK TGS +KSF+
Sbjct: 2 QLSTDGAVFHRACFKCHHCKSTLSFSSYSSFEGVPYCKPHFAQLFKETGSYNKSFQ 169
>gb|BQ764354.1|BQ764354 EBan01_SQ005_I18_R anther, yellow stage, no treatment, cv Optic,
EBan01 Hordeum vulgare subsp. vulgare cDNA clone
EBan01_SQ005_I18 5', mRNA sequence
Length = 598
Score = 133 bits (286), Expect(2) = 4e-054
Identities = 51/97 (52%), Positives = 63/97 (64%)
Frame = -2 / +3
Query: 931 SPP*AECVVAEAGRETTAAMATSFQGTTTKCTACDKTVYLVDKLTADNRIYHKACFRCHH 752
+P * E + + A + SF GT KC CDKTV+ +D LTAD YHK CF+C H
Sbjct: 57 APE*KEARASSLLGRSPARITMSFTGTQDKCKTCDKTVHFIDLLTADGVSYHKTCFKCSH 236
Query: 751 CKGTLKLANYNSFEGVLYCRPHFDQLFKRTGSLDKSF 641
CKGTL + NY+S +GVLYC+ HF+QLFK TGS K F
Sbjct: 237 CKGTLSMCNYSSMDGVLYCKTHFEQLFKETGSFSKKF 347
Score = 98.2 bits (208), Expect(2) = 4e-054
Identities = 35/68 (51%), Positives = 48/68 (70%)
Frame = -2 / +3
Query: 586 TKVSSAFAGTREKCVGCSKTVYPTERVTVNNTMYHKSCFKCCHGGCTISPSNYIAHEGKL 407
+K+SSAF+GT++KC C KTVYP E++++ YHK CFKC HGGC ++ S+Y A G L
Sbjct: 393 SKMSSAFSGTQDKCAACQKTVYPLEKLSLEGECYHKGCFKCSHGGCILTTSSYAALNGIL 572
Query: 406 YCKHHHIQ 383
Y + H Q
Sbjct: 573 YWQIHFSQ 596
>gb|BM442464.2|BM442464 EBan01_SQ003_E04_R anther, yellow stage, no treatment, cv Optic,
EBan01 Hordeum vulgare subsp. vulgare cDNA clone
EBan01_SQ003_E04 5', mRNA sequence
Length = 507
Score = 129 bits (277), Expect(2) = 8e-051
Identities = 46/75 (61%), Positives = 57/75 (76%)
Frame = -2 / +1
Query: 865 SFQGTTTKCTACDKTVYLVDKLTADNRIYHKACFRCHHCKGTLKLANYNSFEGVLYCRPH 686
SF GT KC+AC+KTV+ +D LTAD IYHK CF+C HCKG L + +Y+S +GVLYC+ H
Sbjct: 73 SFTGTQDKCSACEKTVHFIDLLTADGVIYHKTCFKCSHCKGILSMCSYSSMDGVLYCKTH 252
Query: 685 FDQLFKRTGSLDKSF 641
F+QLFK TGS K F
Sbjct: 253 FEQLFKETGSFSKKF 297
Score = 91.3 bits (193), Expect(2) = 8e-051
Identities = 30/52 (57%), Positives = 42/52 (80%)
Frame = -2 / +1
Query: 586 TKVSSAFAGTREKCVGCSKTVYPTERVTVNNTMYHKSCFKCCHGGCTISPSN 431
+K+S+AF+GT++KC C+KTVYP E++T+ YHKSCFKC HGGC + PS+
Sbjct: 346 SKLSAAFSGTQDKCAACTKTVYPLEKMTLEGDAYHKSCFKCSHGGCILPPSS 501
>gb|BQ664619.1|BQ664619 HV04C01u HV Hordeum vulgare subsp. vulgare cDNA clone HV04C01
3-PRIME, mRNA sequence
Length = 435
Score = 179 bits (386), Expect(3) = 9e-050
Identities = 67/77 (87%), Positives = 71/77 (92%)
Frame = -2 / -1
Query: 529 TVYPTERVTVNNTMYHKSCFKCCHGGCTISPSNYIAHEGKLYCKHHHIQLIKEKGNFSQL 350
TVYP ERVTVNNTMYHKSCFKCCHGGCTISPSNYIAHEGKL+CKHHH QLIKEKGNFSQL
Sbjct: 435 TVYPIERVTVNNTMYHKSCFKCCHGGCTISPSNYIAHEGKLFCKHHHTQLIKEKGNFSQL 256
Query: 349 ENDHEKTSQAGSLEEDE 299
ENDH+KTSQ+ +DE
Sbjct: 255 ENDHDKTSQSAGSVDDE 205
Score = 129 bits (276), Expect(2) = 1e-035
Identities = 48/56 (85%), Positives = 50/56 (89%)
Frame = +3 / +2
Query: 324 CDVFSWSFSSWLKFPFSLISWMWWCLQYSFPSCAM*LEGLMVHPPWQHLKQLLWYI 491
CDV S SFSSWLKFPFSLISW+WWCLQ S PS AM* EGLMVHPPWQHLKQLLWY+
Sbjct: 230 CDVLS*SFSSWLKFPFSLISWVWWCLQKSLPSWAM*FEGLMVHPPWQHLKQLLWYM 397
Score = 124 bits (265), Expect(3) = 4e-037
Identities = 50/67 (74%), Positives = 58/67 (86%)
Frame = -1 / -3
Query: 527 SLSN*EGHC**HYVPQELLQVLPWRVHHQPF*LHCARGEAVLQAPPHPADQGEGELQPA* 348
SLSN*EG+C *H+VPQELLQ+LPWRVHHQPF LH RG+A+LQAPPHPADQ EG+ QPA
Sbjct: 433 SLSN*EGYCQ*HHVPQELLQMLPWRVHHQPFELHRPRGQALLQAPPHPADQREGKFQPAR 254
Query: 347 E*PREDI 327
E R+D+
Sbjct: 253 ERSRQDV 233
Score = 46.0 bits (94), Expect(3) = 4e-037
Identities = 18/35 (51%), Positives = 21/35 (60%)
Frame = -3 / -2
Query: 345 MTTRRHHRLGHWRRMNKSIDH*AQPQMNNESSCIC 241
+TTRRH G W +SI * P+MNNE CIC
Sbjct: 248 ITTRRHKVPGQWMMKTRSISP*GYPEMNNEPFCIC 144
Score = 40.9 bits (83), Expect(2) = 1e-035
Identities = 20/54 (37%), Positives = 27/54 (50%)
Frame = +1 / +3
Query: 175 NTHDLHW*N*NRTTPQKYIVL*ANARGFIIHLWLCSVINTLVHPPPVTQPVMSS 336
N DL W N +K ANA G +IHLW+ S NT P+T+ ++S
Sbjct: 78 NALDLDWKNSKEARSRKIYCSGANAEGLVIHLWISSRTNTPSLHHPLTRHFVTS 239
Score = 31.8 bits (63), Expect(3) = 9e-050
Identities = 17/40 (42%), Positives = 21/40 (52%)
Frame = -1 / -3
Query: 293 VLITEHNHR*IMNPLAFA*STMYFCGVVRFQFYQWRSCVF 174
VL+ E R*I +P AFA F F+F+Q RS F
Sbjct: 196 VLVLEDIQR*ITSPSAFAPEQYIFLLRASFEFFQSRSSAF 77
Score = 24.4 bits (47), Expect(3) = 9e-050
Identities = 9/17 (52%), Positives = 11/17 (64%)
Frame = -1 / -1
Query: 158 CCLVSACKRCYL*VRYS 108
C + ACK CY+*V S
Sbjct: 63 CYCLVACKPCYI*VEIS 13
Score = 23.1 bits (44), Expect(3) = 4e-037
Identities = 9/34 (26%), Positives = 20/34 (58%)
Frame = -3 / -2
Query: 201 VLPMEVMCVQRTMILLSCICM*TLLSLSQILYLV 100
V P+E+ C+ + +++ + ++S + LYLV
Sbjct: 104 VFPIEIKCISKDNYVIALSHVNLVISELKYLYLV 3
>gb|BJ476245.1|BJ476245 BJ476245 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal33a06 3', mRNA sequence
Length = 688
Score = 133 bits (285), Expect(2) = 1e-049
Identities = 48/79 (60%), Positives = 58/79 (73%)
Frame = -2 / -2
Query: 586 TKVSSAFAGTREKCVGCSKTVYPTERVTVNNTMYHKSCFKCCHGGCTISPSNYIAHEGKL 407
+K + F+GT++KC C KT YP E+VTV YHKSCFKC HGGC +SPSNY A EG L
Sbjct: 498 SKAAGMFSGTQDKCATCGKTAYPLEKVTVEEKSYHKSCFKCSHGGCALSPSNYAALEGIL 319
Query: 406 YCKHHHIQLIKEKGNFSQL 350
YCKHH QL KEKG+++ L
Sbjct: 318 YCKHHFSQLFKEKGSYNHL 262
Score = 84.0 bits (177), Expect(2) = 1e-049
Identities = 29/43 (67%), Positives = 36/43 (83%)
Frame = -2 / -2
Query: 766 FRCHHCKGTLKLANYNSFEGVLYCRPHFDQLFKRTGSLDKSFE 638
F+CHHCK TL ++Y+SFEGV YC+PHF QLFK TGS +KSF+
Sbjct: 687 FKCHHCKSTLSFSSYSSFEGVPYCKPHFAQLFKETGSYNKSFQ 559
>gb|BQ469637.1|BQ469637 HZ01G16r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ01G16
5-PRIME, mRNA sequence
Length = 509
Score = 144 bits (310), Expect(2) = 3e-049
Identities = 54/99 (54%), Positives = 69/99 (69%)
Frame = -2 / +1
Query: 934 ASPP*AECVVAEAGRETTAAMATSFQGTTTKCTACDKTVYLVDKLTADNRIYHKACFRCH 755
AS + + RETTA AT F GT KC C KTVY +D+L+ D ++H+ACF+CH
Sbjct: 22 ASGAGGQAEIRSGERETTATAATMFSGTQQKCKVCTKTVYPMDQLSTDGAVFHRACFKCH 201
Query: 754 HCKGTLKLANYNSFEGVLYCRPHFDQLFKRTGSLDKSFE 638
HCK TL ++Y+SFEGV YC+PHF QLFK TGS +KSF+
Sbjct: 202 HCKSTLSFSSYSSFEGVPYCKPHFAQLFKETGSYNKSFQ 318
Score = 71.2 bits (149), Expect(2) = 3e-049
Identities = 24/43 (55%), Positives = 30/43 (69%)
Frame = -2 / +1
Query: 586 TKVSSAFAGTREKCVGCSKTVYPTERVTVNNTMYHKSCFKCCH 458
+K + F+GT++KC C KT YP E+VTV YHKSCFKC H
Sbjct: 379 SKAAGMFSGTQDKCATCGKTAYPLEKVTVEEKSYHKSCFKCSH 507
>gb|BU996702.1|BU996702 HM14H14r HM Hordeum vulgare subsp. vulgare cDNA clone HM14H14
5-PRIME, mRNA sequence
Length = 558
Score = 144 bits (310), Expect(2) = 2e-048
Identities = 54/99 (54%), Positives = 69/99 (69%)
Frame = -2 / +3
Query: 934 ASPP*AECVVAEAGRETTAAMATSFQGTTTKCTACDKTVYLVDKLTADNRIYHKACFRCH 755
AS + + RETTA AT F GT KC C KTVY +D+L+ D ++H+ACF+CH
Sbjct: 75 ASGAGGQAEIRSGERETTATAATMFSGTQQKCKVCTKTVYPMDQLSTDGAVFHRACFKCH 254
Query: 754 HCKGTLKLANYNSFEGVLYCRPHFDQLFKRTGSLDKSFE 638
HCK TL ++Y+SFEGV YC+PHF QLFK TGS +KSF+
Sbjct: 255 HCKSTLSFSSYSSFEGVPYCKPHFAQLFKETGSYNKSFQ 371
Score = 68.0 bits (142), Expect(2) = 2e-048
Identities = 23/41 (56%), Positives = 29/41 (70%)
Frame = -2 / +3
Query: 586 TKVSSAFAGTREKCVGCSKTVYPTERVTVNNTMYHKSCFKC 464
+K + F+GT++KC C KT YP E+VTV YHKSCFKC
Sbjct: 432 SKAAGMFSGTQDKCATCGKTAYPLEKVTVEEKSYHKSCFKC 554
>gb|AL505692.1|AL505692 AL505692 Hordeum vulgare Barke roots Hordeum vulgare subsp. vulgare
cDNA clone HW09D21V 5', mRNA sequence
Length = 470
Score = 144 bits (309), Expect(2) = 5e-047
Identities = 52/85 (61%), Positives = 65/85 (76%)
Frame = -2 / +1
Query: 892 RETTAAMATSFQGTTTKCTACDKTVYLVDKLTADNRIYHKACFRCHHCKGTLKLANYNSF 713
RETTA AT F GT KC C KTVY +D+L+ D ++H+ACF+CHHCK TL ++Y+SF
Sbjct: 34 RETTATAATMFSGTQQKCKVCTKTVYPMDQLSTDGAVFHRACFKCHHCKSTLSFSSYSSF 213
Query: 712 EGVLYCRPHFDQLFKRTGSLDKSFE 638
EGV YC+PHF QLFK TGS +KSF+
Sbjct: 214 EGVPYCKPHFAQLFKETGSYNKSFQ 288
Score = 63.8 bits (133), Expect(2) = 5e-047
Identities = 22/40 (55%), Positives = 28/40 (70%)
Frame = -2 / +1
Query: 586 TKVSSAFAGTREKCVGCSKTVYPTERVTVNNTMYHKSCFK 467
+K + F+GT++KC C KT YP E+VTV YHKSCFK
Sbjct: 349 SKAAGMFSGTQDKCATCGKTAYPLEKVTVEEKSYHKSCFK 468
>gb|BE216049.2|BE216049 HV_CEb0009E03f Hordeum vulgare seedling green leaf EST library
HVcDNA0005 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEb0009E03f, mRNA sequence
Length = 652
Score = 133 bits (285), Expect(2) = 3e-046
Identities = 48/79 (60%), Positives = 58/79 (73%)
Frame = -2 / +1
Query: 586 TKVSSAFAGTREKCVGCSKTVYPTERVTVNNTMYHKSCFKCCHGGCTISPSNYIAHEGKL 407
+K + F+GT++KC C KT YP E+VTV YHKSCFKC HGGC +SPSNY A EG L
Sbjct: 199 SKAAGMFSGTQDKCATCGKTAYPLEKVTVEEKSYHKSCFKCSHGGCALSPSNYAALEGIL 378
Query: 406 YCKHHHIQLIKEKGNFSQL 350
YCKHH QL KEKG+++ L
Sbjct: 379 YCKHHFSQLFKEKGSYNHL 435
Score = 72.5 bits (152), Expect(2) = 3e-046
Identities = 26/39 (66%), Positives = 32/39 (82%)
Frame = -2 / +1
Query: 754 HCKGTLKLANYNSFEGVLYCRPHFDQLFKRTGSLDKSFE 638
HCK TL ++Y+SFEGV YC+PHF QLFK TGS +KSF+
Sbjct: 22 HCKSTLSFSSYSSFEGVPYCKPHFAQLFKETGSYNKSFQ 138
>gb|BM373658.2|BM373658 EBma03_SQ002_E03_R maternal, 8 DPA, no treatment, cv Optic, EBma03
Hordeum vulgare subsp. vulgare cDNA clone
EBma03_SQ002_E03 5', mRNA sequence
Length = 281
Score = 183 bits (395), Expect = 1e-045
Identities = 70/73 (95%), Positives = 71/73 (97%)
Frame = -2 / +1
Query: 877 AMATSFQGTTTKCTACDKTVYLVDKLTADNRIYHKACFRCHHCKGTLKLANYNSFEGVLY 698
AMATSFQGTTTKC ACDKTVYLVDKLTADNR+YHKACF CHHCKGTLKLANYNSFEGVLY
Sbjct: 61 AMATSFQGTTTKCNACDKTVYLVDKLTADNRVYHKACFWCHHCKGTLKLANYNSFEGVLY 240
Query: 697 CRPHFDQLFKRTG 659
CRPHFDQLFKRTG
Sbjct: 241 CRPHFDQLFKRTG 279
Score = 139 bits (298), Expect = 2e-032
Identities = 60/69 (86%), Positives = 64/69 (92%)
Frame = +3 / -1
Query: 675 SWSK*GLQ*STPSKEL*LASLRVPLQWWQRKQALW*MRLSAVSLSTRYTVLSQAVHLVVV 854
SWSK*GLQ*STPS EL* ASLRVPLQWW +KQALW* RLSAVSLSTRYTVLSQA+HLVVV
Sbjct: 263 SWSK*GLQ*STPSNEL*FASLRVPLQWWHQKQALW*TRLSAVSLSTRYTVLSQALHLVVV 84
Query: 855 PWKEVAMAA 881
PW EVA+A+
Sbjct: 83 PWNEVAIAS 57
>gb|AJ460964.1|AJ460964 AJ460964 S00002 Hordeum vulgare subsp. vulgare cDNA clone
S0000200028B08F1, mRNA sequence
Length = 240
Score = 183 bits (394), Expect = 1e-045
Identities = 73/80 (91%), Positives = 74/80 (92%)
Frame = -2 / +1
Query: 661 GSLDKSFEGTPKVVKPERNVGNENATKVSSAFAGTREKCVGCSKTVYPTERVTVNNTMYH 482
GSLDKSFEGTPKVVKPERNVGNENA KVSSAFAGTREKC GCS TVYP ERVTV+NTMYH
Sbjct: 1 GSLDKSFEGTPKVVKPERNVGNENAIKVSSAFAGTREKCFGCSATVYPIERVTVHNTMYH 180
Query: 481 KSCFKCCHGGCTISPSNYIA 422
KSCF CC GGCTISPSNYIA
Sbjct: 181 KSCFTCCPGGCTISPSNYIA 240
Score = 155 bits (334), Expect = 3e-037
Identities = 60/75 (80%), Positives = 69/75 (92%)
Frame = -1 / +3
Query: 650 QELRRNSQGCQARKKRWE*ECY*SLKRLCWHQREMCWMQQDSLSN*EGHC**HYVPQELL 471
QELRR+S+GCQARK+ WE*ECY*SL+R+CWHQREM WMQ+DSLS *EG+C *H+VPQELL
Sbjct: 12 QELRRDSKGCQARKECWE*ECY*SLERICWHQREMFWMQRDSLSY*EGYCP*HHVPQELL 191
Query: 470 QVLPWRVHHQPF*LH 426
+LPWRVHHQPF LH
Sbjct: 192 HMLPWRVHHQPFQLH 236
Score = 132 bits (283), Expect = 3e-030
Identities = 58/79 (73%), Positives = 67/79 (84%)
Frame = +2 / -1
Query: 425 NVVRRADGAPSMAALEAALVVHSVINSDPLSWIDCLAASNTFLSGASKGA*DFSSILIPN 604
+V+ RADGAPS AA EAALVVH V++S+PL+ IDC AAS TFLSGASK A DF+SILIPN
Sbjct: 237 DVIGRADGAPSRAACEAALVVHGVMDSNPLNRIDCRAASKTFLSGASKCARDFNSILIPN 58
Query: 605 VSFWLDNLGSSFEALVQAP 661
+ FWLDNL S FEALV+AP
Sbjct: 57 IPFWLDNLWSPFEALVEAP 1
Score = 128 bits (274), Expect = 5e-029
Identities = 63/78 (80%), Positives = 65/78 (83%)
Frame = -3 / +2
Query: 660 GAWTRASKELPRLSSQKETLGMRMLLKSQAPLLAPERNVLDAARQSIQLRGSLLITLCTT 481
GA TRASK L RLSSQK LGMRMLLKS+A LLAPERNVLDAARQSI LRG L IT CTT
Sbjct: 2 GASTRASKGLQRLSSQKGMLGMRMLLKSRAHLLAPERNVLDAARQSILLRGLLSITPCTT 181
Query: 480 RAASSAAMEGAPSALLTT 427
RAAS AA+EGAPSAL T
Sbjct: 182 RAASHAALEGAPSALPIT 235
Score = 114 bits (243), Expect = 9e-025
Identities = 48/70 (68%), Positives = 51/70 (72%)
Frame = +3 / -2
Query: 423 AM*LEGLMVHPPWQHLKQLLWYIXXXXXXXXXXXXXXXHPTHFSLVPAKALETLVAFSFP 602
AM*LEGLMVHPP QH+KQLLWY+ HP HFSLVPA ALETL+AFSFP
Sbjct: 239 AM*LEGLMVHPPGQHVKQLLWYMVLWTVTLSIG*TVALHPKHFSLVPANALETLIAFSFP 60
Query: 603 TFLSGLTTLG 632
TFLSGLTT G
Sbjct: 59 TFLSGLTTFG 30
>gb|BU999728.1|BU999728 HI15I03r HI Hordeum vulgare subsp. vulgare cDNA clone HI15I03
5-PRIME, mRNA sequence
Length = 543
Score = 144 bits (310), Expect(2) = 2e-044
Identities = 54/99 (54%), Positives = 69/99 (69%)
Frame = -2 / +2
Query: 934 ASPP*AECVVAEAGRETTAAMATSFQGTTTKCTACDKTVYLVDKLTADNRIYHKACFRCH 755
AS + + RETTA AT F GT KC C KTVY +D+L+ D ++H+ACF+CH
Sbjct: 74 ASGAGGQAEIRSGERETTATAATMFSGTQQKCKVCTKTVYPMDQLSTDGAVFHRACFKCH 253
Query: 754 HCKGTLKLANYNSFEGVLYCRPHFDQLFKRTGSLDKSFE 638
HCK TL ++Y+SFEGV YC+PHF QLFK TGS +KSF+
Sbjct: 254 HCKSTLSFSSYSSFEGVPYCKPHFAQLFKETGSYNKSFQ 370
Score = 54.7 bits (113), Expect(2) = 2e-044
Identities = 19/37 (51%), Positives = 25/37 (67%)
Frame = -2 / +2
Query: 586 TKVSSAFAGTREKCVGCSKTVYPTERVTVNNTMYHKS 476
+K + F+GT++KC C KT YP E+VTV YHKS
Sbjct: 431 SKAAGMFSGTQDKCATCGKTAYPLEKVTVEEKSYHKS 541
Database: Hordeum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:16 PM
Number of letters in database: 175,134,539
Number of sequences in database: 312,970
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 428,985,181
Number of Sequences: 312970
Number of extensions: 6440343
Number of successful extensions: 47836
Number of sequences better than 1.0e-020: 107
length of database: 58,378,179
effective HSP length: 52
effective length of database: 42,103,739
effective search space used: 11115387096
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)