TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 1804958.2.1
(1118 letters)
Database: Hordeum_nucl_with_EST.fasta
312,970 sequences; 175,134,539 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CA030113.1|CA030113 HX06C02r HX Hordeum vulgare subsp. v... 385 e-120
gb|BE215344.1|BE215344 HV_CEb0006I15f Hordeum vulgare seedl... 416 e-115
gb|BF265852.2|BF265852 HV_CEa0013I03f Hordeum vulgare seedl... 385 e-109
gb|BM100617.2|BM100617 EBma01_SQ005_L23_R maternal, 4 DPA, ... 208 e-106
gb|BE196054.2|BE196054 HVSMEh0091D21f Hordeum vulgare 5-45 ... 366 e-101
gb|BG415995.2|BG415995 HVSMEk0009F13f Hordeum vulgare testa... 310 3e-096
gb|BG417425.2|BG417425 HVSMEk0017E11f Hordeum vulgare testa... 326 1e-088
gb|CB874722.1|CB874722 HX06C02w HX Hordeum vulgare subsp. v... 272 2e-087
gb|AV916245.1|AV916245 AV916245 K. Sato unpublished cDNA li... 239 3e-086
gb|CB874756.1|CB874756 HX06D16w HX Hordeum vulgare subsp. v... 314 8e-085
gb|BJ473415.1|BJ473415 BJ473415 K. Sato unpublished cDNA li... 263 1e-084
gb|BU971142.1|BU971142 HB16L19r BC Hordeum vulgare subsp. v... 169 9e-081
gb|BJ451080.1|BJ451080 BJ451080 K. Sato unpublished cDNA li... 259 3e-076
gb|BU975928.1|BU975928 HB32L19r BC Hordeum vulgare subsp. v... 281 7e-075
gb|CA030641.1|CA030641 HX07K22r HX Hordeum vulgare subsp. v... 278 3e-074
gb|BJ468650.1|BJ468650 BJ468650 K. Sato unpublished cDNA li... 221 5e-072
gb|BU996805.1|BU996805 HM14N04r HM Hordeum vulgare subsp. v... 201 5e-064
gb|BU978254.1|BU978254 HA12N07r HA Hordeum vulgare subsp. v... 244 5e-064
gb|AV921670.1|AV921670 AV921670 K. Sato unpublished cDNA li... 160 1e-063
gb|CB875233.1|CB875233 HX07K22w HX Hordeum vulgare subsp. v... 239 2e-062
gb|BG414215.1|BG414215 HVSMEk0001E02f Hordeum vulgare testa... 234 6e-061
gb|BG417650.1|BG417650 HVSMEk0019A03f Hordeum vulgare testa... 221 6e-057
gb|BJ457634.1|BJ457634 BJ457634 K. Sato unpublished cDNA li... 166 4e-046
gb|BU973725.1|BU973725 HB25M17r BC Hordeum vulgare subsp. v... 184 9e-046
gb|CA028206.1|CA028206 HZ61F01r HZ Hordeum vulgare subsp. v... 127 5e-044
gb|CK122310.1|CK122310 BES1824102n07 BES1824 Hordeum vulgar... 113 8e-040
gb|BJ458585.1|BJ458585 BJ458585 K. Sato unpublished cDNA li... 138 4e-039
gb|BJ450210.1|BJ450210 BJ450210 K. Sato unpublished cDNA li... 135 3e-038
gb|BG343570.1|BG343570 HVSMEg0006G18f Hordeum vulgare pre-a... 69 1e-036
emb|AJ234606.1|HVU234606 Hordeum vulgare genomic DNA fragme... 90 3e-035
gb|BQ663666.1|BQ663666 HU03I11u HU Hordeum vulgare subsp. v... 75 2e-034
gb|BG415324.2|BG415324 HVSMEk0006A22f Hordeum vulgare testa... 144 9e-034
emb|AJ234870.1|HVU234870 Hordeum vulgare genomic DNA fragme... 87 5e-033
gb|BF629097.2|BF629097 HVSMEb0009N21f Hordeum vulgare seedl... 132 3e-032
gb|BE195976.3|BE195976 HVSMEh0091A07f Hordeum vulgare 5-45 ... 133 1e-030
gb|BU975642.1|BU975642 HB31N05r BC Hordeum vulgare subsp. v... 133 1e-030
gb|BU985772.1|BU985772 HF08J07r HF Hordeum vulgare subsp. v... 133 1e-030
gb|BU969384.1|BU969384 HB11G01r BC Hordeum vulgare subsp. v... 133 2e-030
gb|CA031166.1|CA031166 HX09D06r HX Hordeum vulgare subsp. v... 133 2e-030
gb|CB876456.1|CB876456 HX11F07w HX Hordeum vulgare subsp. v... 133 2e-030
gb|BU974279.1|BU974279 HB27H05r BC Hordeum vulgare subsp. v... 133 2e-030
gb|AV918127.1|AV918127 AV918127 K. Sato unpublished cDNA li... 132 3e-030
gb|AV918379.1|AV918379 AV918379 K. Sato unpublished cDNA li... 132 3e-030
gb|BU971417.1|BU971417 HB17I20r BC Hordeum vulgare subsp. v... 132 3e-030
gb|CB874380.1|CB874380 HX05B15w HX Hordeum vulgare subsp. v... 132 3e-030
gb|CB875735.1|CB875735 HX09D06w HX Hordeum vulgare subsp. v... 132 3e-030
gb|CB875995.1|CB875995 HX09P10w HX Hordeum vulgare subsp. v... 132 3e-030
gb|AV918025.1|AV918025 AV918025 K. Sato unpublished cDNA li... 129 2e-029
gb|CB876294.1|CB876294 HX10N18w HX Hordeum vulgare subsp. v... 129 2e-029
gb|AV917119.1|AV917119 AV917119 K. Sato unpublished cDNA li... 78 1e-028
gb|CB859263.1|CB859263 HI09O13w HI Hordeum vulgare subsp. v... 127 1e-028
gb|BQ462861.1|BQ462861 HI02D22r HI Hordeum vulgare subsp. v... 124 1e-027
gb|BU969648.1|BU969648 HB12C12r BC Hordeum vulgare subsp. v... 115 4e-025
gb|CA022160.1|CA022160 HZ42F08r HZ Hordeum vulgare subsp. v... 78 9e-025
gb|BU986936.1|BU986936 HF13F11r HF Hordeum vulgare subsp. v... 68 3e-023
gb|BU970597.1|BU970597 HB15B24r BC Hordeum vulgare subsp. v... 69 2e-022
gb|BQ472674.1|BQ472674 HB01M23r BC Hordeum vulgare subsp. v... 103 2e-021
>gb|CA030113.1|CA030113 HX06C02r HX Hordeum vulgare subsp. vulgare cDNA clone HX06C02
5-PRIME, mRNA sequence
Length = 624
Score = 385 bits (834), Expect(2) = e-120
Identities = 154/164 (93%), Positives = 158/164 (96%)
Frame = +1 / +3
Query: 328 RDGVSEGQFYQVLLYELDAIRKACASLESDYQPPVTFVVVQXRHHTRLFANNHNDNRAVD 507
RDGVSEGQFYQVLL+ELDAIRKACASLE +YQPPVTFVVVQ RHHTRLFANNHND R VD
Sbjct: 12 RDGVSEGQFYQVLLFELDAIRKACASLEPNYQPPVTFVVVQKRHHTRLFANNHNDQRTVD 191
Query: 508 KSGNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENNFTADGLQTLTNN 687
+SGNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDEN FTAD LQTLTNN
Sbjct: 192 RSGNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENKFTADELQTLTNN 371
Query: 688 LCYTYARCTRSVSIVPPAYYAHLAAFRARFYMEPDTSDSGSMAS 819
LCYTYARCTRSVSIVPPAYYAHLAAFRARFYMEPDTSDSGS+AS
Sbjct: 372 LCYTYARCTRSVSIVPPAYYAHLAAFRARFYMEPDTSDSGSVAS 503
Score = 255 bits (552), Expect(2) = 7e-078
Identities = 108/168 (64%), Positives = 116/168 (69%)
Frame = -2 / -1
Query: 823 HGLP*IHCHSYLAPCRTELGRLPGEHSMQEEQSILSVCT*HTCNTSCW*EFATHQP*SCS 644
H P C APCRTE GRLP HSMQEEQSI S C HTC+T C *EFATHQ * CS
Sbjct: 507 HRSPRTRCRRCPAPCRTEPGRLPDGHSMQEEQSIQSGCIEHTCSTGCL*EFATHQQ*ICS 328
Query: 643 HPTEHGNGQGGLFPECQHGCTGRNQTQLDGRSSSPPQCQAVCSRFYRQHDYHCDY*QTTW 464
P EH +GQ GLFPECQHG T RN+ DGRSS+ +CQAVCSRFYRQ+ HCD *Q
Sbjct: 327 RPREHDSGQAGLFPECQHGYTSRNRILSDGRSSNQQRCQAVCSRFYRQYADHCDC*QKA* 148
Query: 463 CDDAXGPRQK*LEAGSQTPMTHRPF*WHQVHTTELGRIVPH*RHPCRI 320
C DA G QK*LEA + P HRP *WHQV TTELGR VP * HPC +
Sbjct: 147 CGDASGQPQK*LEADNLAPRMHRPS*WHQVQTTELGRTVPR*HHPCLV 4
Score = 245 bits (529), Expect(2) = 9e-071
Identities = 111/165 (67%), Positives = 127/165 (76%)
Frame = -3 / -2
Query: 822 TACHRSTVTRIWLHVEPSSEGCQVSIVCRRNNRY*ACAPSIRVTQVVGESLQPISRKVVL 643
TA H V + LHVEPS EGCQ+ IVCRRNNRY A A SIRV QVV ESLQ IS K VL
Sbjct: 506 TARHGPAVGGVRLHVEPSPEGCQMGIVCRRNNRYRAGASSIRVAQVVCESLQLISSKFVL 327
Query: 642 IPQNMVMGRAACSLNASMAAQVEIKLSWMADLRVHHSARQYVPAFIDSTXXXXXISKQPG 463
+P+NM++GR ACSLNASMA QVEI+ MADLR+++ ARQYVPA IDST +SK+P
Sbjct: 326 VPENMIVGRPACSLNASMATQVEIEFCRMADLRINNGARQYVPASIDSTLIIVIVSKKPS 147
Query: 462 VMTLLDHDKSNWRLVVRLQ*RTGLSNGIKFIQQNLVELSLTDAIP 328
V+TLLD+ KSNWRL++ LQ TGL NGIKF QQNLVELSL D IP
Sbjct: 146 VVTLLDNHKSNWRLIIWLQGCTGLPNGIKFKQQNLVELSLADTIP 12
Score = 199 bits (430), Expect(3) = 5e-057
Identities = 88/129 (68%), Positives = 99/129 (76%)
Frame = +3 / +2
Query: 327 QGWRQ*GTILPSSVV*T*CH*KGLCVIGV*LPASSYFCRGPXASSHQVVC**SQ**SCCR 506
QGW Q GT+LPSSVV*T*CH*+GLC++G L ASSYFC P AS H C* SQ* + CR
Sbjct: 11 QGWCQRGTVLPSSVV*T*CH*EGLCILGAKLSASSYFCGCPEASPH*AFC*QSQ*SAYCR 190
Query: 507 *KREHTAWHCGGLEDLPSN*V*FLPVQPCWHSGNKPPCPLPCSVG*EQLYG*WVANSHQQ 686
*KREHTAWH EDLPS+ + FL V PCWHSGNKP CPL CS+G EQ+Y * VANSH+Q
Sbjct: 191 *KREHTAWHRC*FEDLPSDRIRFLLV*PCWHSGNKPACPLSCSLGREQIYC**VANSHKQ 370
Query: 687 LVLHVC*VH 713
VLHVC +H
Sbjct: 371 PVLHVCSMH 397
Score = 182 bits (391), Expect(3) = 1e-062
Identities = 84/123 (68%), Positives = 89/123 (72%)
Frame = +2 / +1
Query: 455 VITPGCLLIITMIIVLSIKAGTYCLALWWTRRSAIQLSLISTCAAMLAFREQAALPITMF 634
V T G LL ITMI VLSI+AGTYCLA RRSAI+ + ISTC AMLAFREQA LP MF
Sbjct: 139 VTTLGFLLTITMISVLSIEAGTYCLAPLLIRRSAIRQNSISTCVAMLAFREQAGLPTIMF 318
Query: 635 CGMRTTLRLMGCKLSPTTCVTRMLGAHAQYRLFLLHTMLTWQPSELGSTWSQIRVTVDLW 814
G RT L LM CKLS TTC TRML A A YRLFLLHTM WQPS LGSTWS+ T W
Sbjct: 319 SGTRTNLLLMSCKLSQTTCATRMLDAPALYRLFLLHTMPIWQPSGLGSTWSRTPPTAGPW 498
Query: 815 QAV 823
+AV
Sbjct: 499 RAV 507
Score = 180 bits (387), Expect(3) = 2e-060
Identities = 81/102 (79%), Positives = 83/102 (81%)
Frame = -1 / -3
Query: 818 LAIDPLSLVSGSM*NXXXXXXXXXXXAGGTIDTERVHLAYV*HKLLVRVCNPSAVKLFSS 639
LA DPLS VSGSM*N AGGTIDTERVH AYV*H+L VRVCN SAV LFSS
Sbjct: 502 LATDPLSEVSGSM*NRARKAARWA*YAGGTIDTERVHRAYV*HRLFVRVCNSSAVNLFSS 323
Query: 638 HRTW*WAGRLVP*MPAWLHR*KSNSVGWQIFESTTVPGSMFP 513
RT *WAGRLVP*MPAWLH+*KSNSVGWQIFESTTVPGSMFP
Sbjct: 322 QRT**WAGRLVP*MPAWLHK*KSNSVGWQIFESTTVPGSMFP 197
Score = 68.0 bits (142), Expect(2) = e-120
Identities = 30/46 (65%), Positives = 33/46 (71%)
Frame = +1 / +3
Query: 796 SDSGSMASRGPPPGGRNTKAAGVGNVAVRPLPALKENVKRVMFYC* 933
S S + +RG PP G + GNVAVRPLPALKENVKRVMFYC*
Sbjct: 486 SGSVASGARGGPPQGGPRSSTRFGNVAVRPLPALKENVKRVMFYC* 623
Score = 62.5 bits (130), Expect(3) = 2e-060
Identities = 26/28 (92%), Positives = 26/28 (92%)
Frame = -1 / -3
Query: 410 SNDAQAFLMASSSYNRTW*NCPSLTPSL 327
S DAQAFLMASSS NRTW*NCPSLTPSL
Sbjct: 94 SKDAQAFLMASSSNNRTW*NCPSLTPSL 11
Score = 56.1 bits (116), Expect(2) = 7e-078
Identities = 27/38 (71%), Positives = 27/38 (71%)
Frame = -1 / -3
Query: 932 *Q*NMTRFTFSLRAGNGLTATFPTPAALVLRPPGGGPR 819
*Q*NMTR TFSLRAG GLTATFP L P GG PR
Sbjct: 622 *Q*NMTRLTFSLRAGRGLTATFPNLVLLRGPPCGGPPR 509
Score = 52.8 bits (109), Expect(3) = 1e-062
Identities = 19/27 (70%), Positives = 22/27 (81%)
Frame = +2 / +1
Query: 320 YSTGMASVRDNSTKFCCMNLMPLERPV 400
+ GM S RD+STKFCC+NLMPL RPV
Sbjct: 4 HEAGMVSARDSSTKFCCLNLMPLGRPV 84
Score = 44.6 bits (91), Expect(3) = 1e-062
Identities = 17/34 (50%), Positives = 21/34 (61%)
Frame = +3 / +2
Query: 822 WPSTRGAQHQGCRCWECCCEAITCPQGKREAGHV 923
W S+ G Q + WE CC+A PQGKR+A HV
Sbjct: 512 WRSSTGRSTQQHQVWERCCQASPRPQGKRQARHV 613
Score = 42.8 bits (87), Expect(2) = 9e-071
Identities = 20/42 (47%), Positives = 23/42 (54%)
Frame = -3 / -2
Query: 933 LAVEHDPLHVFLEGR*WPHSNIPNTGSLGVAPPWWRATACHR 808
LAV+HD L VFLEG P SN+P G+ W AT R
Sbjct: 623 LAVKHDALDVFLEGGERPDSNVPKPGAAAWTALWRTATCTAR 498
Score = 33.1 bits (66), Expect(3) = 5e-057
Identities = 17/26 (65%), Positives = 17/26 (65%)
Frame = +2 / +1
Query: 857 PVLGMLL*GHYLPSRKT*SGSCSTAK 934
P LG LL G PSRKT S SC TAK
Sbjct: 547 PGLGTLLSGLSPPSRKTSSASCFTAK 624
Score = 29.5 bits (58), Expect(3) = 2e-060
Identities = 16/24 (66%), Positives = 18/24 (75%)
Frame = -2 / -1
Query: 934 LSSRT*PASRFP*GQVMASQQHSQ 863
LSS+T* A RFP*G+ A QQ SQ
Sbjct: 624 LSSKT*RA*RFP*GRGEA*QQRSQ 553
Score = 27.6 bits (54), Expect(3) = 5e-057
Identities = 12/21 (57%), Positives = 15/21 (71%)
Frame = +3 / +2
Query: 756 GSLPSSVLHGARYE*QWIYGK 818
GSLP SVLHGA + Q + G+
Sbjct: 440 GSLPGSVLHGAGHLRQRVRGE 502
>gb|BE215344.1|BE215344 HV_CEb0006I15f Hordeum vulgare seedling green leaf EST library
HVcDNA0005 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEb0006I15f, mRNA sequence
Length = 679
Score = 416 bits (903), Expect = e-115
Identities = 167/194 (86%), Positives = 178/194 (91%)
Frame = +1 / +2
Query: 142 WPEVTKYAGLVSAQAHRXXXIQDLFKVWQDPERGTVSGGMIRELLISFWRATGQKPKRII 321
WPEVTKYAGL+SAQAHR IQD FKVWQDP+RGTV+GGMI+ELLISF RATGQKP+RII
Sbjct: 2 WPEVTKYAGLISAQAHRQELIQDPFKVWQDPQRGTVTGGMIKELLISFKRATGQKPQRII 181
Query: 322 FYRDGVSEGQFYQVLLYELDAIRKACASLESDYQPPVTFVVVQXRHHTRLFANNHNDNRA 501
FY+DGVSEGQFYQVLLYELDAIRKACASLE +YQPPVTFVVVQ RHHTRLFANNHND R
Sbjct: 182 FYKDGVSEGQFYQVLLYELDAIRKACASLEPNYQPPVTFVVVQKRHHTRLFANNHNDQRT 361
Query: 502 VDKSGNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENNFTADGLQTLT 681
VD+SGNILPGTVVDSKICHPTEFDFYLC+HAGIQGTSRPA+YHVLWDEN FTAD LQTL
Sbjct: 362 VDRSGNILPGTVVDSKICHPTEFDFYLCNHAGIQGTSRPANYHVLWDENKFTADELQTLK 541
Query: 682 NNLCYTYARCTRSV 723
LCY YA+ TRSV
Sbjct: 542 KKLCYNYAKGTRSV 583
Score = 254 bits (549), Expect = 7e-067
Identities = 116/191 (60%), Positives = 138/191 (72%)
Frame = +3 / +1
Query: 141 LA*GYKVCRIGECSSPSXXXDTGSFQGMARSRKGDCLWWHDQGASHIFLEGNWTETKEDH 320
LA* + +CRI SP DTGSF MARS K +C WWHDQ ASH F EGN TET E+H
Sbjct: 1 LA*SH*ICRIN*RPSP*ARIDTGSF*SMARSPKRNCDWWHDQRASHFFQEGNRTETPENH 180
Query: 321 ILQGWRQ*GTILPSSVV*T*CH*KGLCVIGV*LPASSYFCRGPXASSHQVVC**SQ**SC 500
ILQGW Q G +L SS V*T*CH*KG+CV+G LPA SYFC P A+SHQ C** Q* +
Sbjct: 181 ILQGWCQRGPVLSSSSV*T*CH*KGMCVLGAQLPAPSYFCSCPEAASHQAFC**PQ*STY 360
Query: 501 CR*KREHTAWHCGGLEDLPSN*V*FLPVQPCWHSGNKPPCPLPCSVG*EQLYG*WVANSH 680
C *KR+HTAWHC +DLPS+ V*FL V P WHSGNKP C L ++G*+Q++ * +ANS
Sbjct: 361 C**KRKHTAWHCC*FKDLPSDRV*FLLV*PRWHSGNKPAC*LSRTMG*KQVHC**IANSK 540
Query: 681 QQLVLHVC*VH 713
+++VL +C* H
Sbjct: 541 KKIVLQLC*GH 573
Score = 251 bits (543), Expect = 5e-066
Identities = 119/196 (60%), Positives = 131/196 (66%)
Frame = -2 / -3
Query: 730 QSILSVCT*HTCNTSCW*EFATHQP*SCSHPTEHGNGQGGLFPECQHGCTGRNQTQLDGR 551
Q I S C *H+C+T + EFA HQ *+C HP N Q GLFPECQ G T RNQT+ DG+
Sbjct: 590 QFIQSGCP*HSCSTIFFLEFAIHQQ*TCFHPIVRDN*QAGLFPECQRGYTSRNQTRSDGK 411
Query: 550 SSSPPQCQAVCSRFYRQHDYHCDY*QTTWCDDAXGPRQK*LEAGSQTPMTHRPF*WHQVH 371
S + QCQAVC RFY+Q+ HC Y*Q WCD A G QK*L AG+ P TH PF*WHQVH
Sbjct: 410 SLNQQQCQAVCFRFYQQYVDHCGY*QKAWCDAASGQLQK*LGAGNWAPRTHMPF*WHQVH 231
Query: 370 TTELGRIVPH*RHPCRI*SSLVSVQLPSRKI*EAP*SCHQRQSPFRDLAIP*KDPVSXXX 191
T EL R P * HPC+I* S VSV+LPS K *EA *SCHQ Q F DLAI *KDPVS
Sbjct: 230 TEELDRTGPR*HHPCKI*FSGVSVRLPS*KK*EAL*SCHQSQFLFGDLAIL*KDPVSILA 51
Query: 190 DGLEHSPILHTL*PQA 143
GL ILH * QA
Sbjct: 50 YGLGR*LILHI**LQA 3
Score = 231 bits (499), Expect = 5e-060
Identities = 114/196 (58%), Positives = 136/196 (69%)
Frame = -3 / -1
Query: 729 NRY*ACAPSIRVTQVVGESLQPISRKVVLIPQNMVMGRAACSLNASMAAQVEIKLSWMAD 550
N Y A A SI V Q SLQ IS ++V IP +++ R ACSLNAS+ QVEIKL MA+
Sbjct: 589 NLYRAGALSIVVAQFFF*SLQFISSELVFIP*YVIISRPACSLNASVVTQVEIKLGRMAN 410
Query: 549 LRVHHSARQYVPAFIDSTXXXXXISKQPGVMTLLDHDKSNWRLVVRLQ*RTGLSNGIKFI 370
L +++SARQYV A I+ST ISK+PGVM LLD+ KSNW LV+ LQ RT LSNGIKFI
Sbjct: 409 L*INNSARQYVSASINSTLIIVVISKKPGVMPLLDNYKSNWGLVIGLQGRTCLSNGIKFI 230
Query: 369 QQNLVELSLTDAIPVEYDPLWFLSSCPPERYEKLPDHATRDSPPFGILPYLEKILYXXXX 190
Q+NL+EL+L D I V+YD L FLS CP ER EKL DHAT S GILPY ++ILY
Sbjct: 229 QKNLIELALADTILVKYDSLGFLSGCPLERNEKLFDHATSHSSSLGILPYFKRILYQFLP 50
Query: 189 MGLSTHQSCILCNLRP 142
MGL + SCI + RP
Sbjct: 49 MGLGAN*SCIFSDFRP 2
Score = 160 bits (345), Expect(2) = 1e-071
Identities = 72/90 (80%), Positives = 74/90 (82%)
Frame = -1 / -2
Query: 410 SNDAQAFLMASSSYNRTW*NCPSLTPSL*NMILFGFCPVALQKDMRSSLIMPPETVPLSG 231
S DA AFLMASSSY RT *N PSLTPSL*NMIL+GFCPVAL K+MRSSLIMPP TVPL G
Sbjct: 270 SKDAHAFLMASSSYRRT**NWPSLTPSL*NMILWGFCPVALLKEMRSSLIMPPVTVPLWG 91
Query: 230 SCHTLKRSCIXXXRWA*ALTNPAYFVTSGQ 141
SCHTLK SCI WA AL NPAY VTSGQ
Sbjct: 90 SCHTLKGSCINSCLWAWALINPAYLVTSGQ 1
Score = 129 bits (277), Expect(2) = 1e-071
Identities = 58/72 (80%), Positives = 60/72 (83%)
Frame = -1 / -2
Query: 728 IDTERVHLAYV*HKLLVRVCNPSAVKLFSSHRTW*WAGRLVP*MPAWLHR*KSNSVGWQI 549
I TERV LA +*H RVCN SAV LFSSH T * AGRLVP*MPAWLH+*KSNSVGWQI
Sbjct: 588 IYTERVPLA*L*HNFFFRVCNSSAVNLFSSHST**LAGRLVP*MPAWLHK*KSNSVGWQI 409
Query: 548 FESTTVPGSMFP 513
FESTTVPGSMFP
Sbjct: 408 FESTTVPGSMFP 373
Score = 109 bits (233), Expect(2) = 5e-050
Identities = 55/87 (63%), Positives = 60/87 (68%)
Frame = +2 / +3
Query: 143 GLRLQSMQDW*VLKPIXXX*YRIFSRYGKIPKGGLSLVA*SGSFSYLSGGQLDRNQRGSY 322
GL+ +MQD KPI *YRI +YGKIPK L LVA*S SFS+LS GQ DRN R SY
Sbjct: 3 GLKSLNMQD*LAPKPIGKN*YRILLKYGKIPKEEL*LVA*SKSFSFLSRGQPDRNPRESY 182
Query: 323 STGMASVRDNSTKFCCMNLMPLERPVR 403
T M S R +S KF CMNLMPLER VR
Sbjct: 183 FTRMVSARASSIKFFCMNLMPLERHVR 263
Score = 109 bits (232), Expect(2) = 5e-050
Identities = 54/91 (59%), Positives = 61/91 (67%)
Frame = +2 / +3
Query: 458 ITPGCLLIITMIIVLSIKAGTYCLALWWTRRSAIQLSLISTCAAMLAFREQAALPITMFC 637
ITPG LLI TMI VL I+A TYCLAL +R AI+ SLISTC LAFREQA L I +
Sbjct: 318 ITPGFLLITTMINVLLIEAETYCLALLLIQRFAIRPSLISTCVTTLAFREQAGLLIITYY 497
Query: 638 GMRTTLRLMGCKLSPTTCVTRMLGAHAQYRL 730
GM+T+ LM CKL C T ML A A Y+L
Sbjct: 498 GMKTSSLLMNCKL*KKNCATTMLRAPALYKL 590
>gb|BF265852.2|BF265852 HV_CEa0013I03f Hordeum vulgare seedling green leaf EST library
HVcDNA0004 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEa0013I03f, mRNA sequence
Length = 751
Score = 385 bits (834), Expect(2) = e-109
Identities = 159/179 (88%), Positives = 166/179 (92%)
Frame = +1 / +2
Query: 34 PGVSDIATIIFGADVTHPHPGEDSSPSIAAVVAFQDWPEVTKYAGLVSAQAHRXXXIQDL 213
P VSD TIIFGADVTHPHPGEDSSPSIAAVVA QDWPEVTKYAGLVSAQAHR IQDL
Sbjct: 182 PLVSDRPTIIFGADVTHPHPGEDSSPSIAAVVASQDWPEVTKYAGLVSAQAHRQELIQDL 361
Query: 214 FKVWQDPERGTVSGGMIRELLISFWRATGQKPKRIIFYRDGVSEGQFYQVLLYELDAIRK 393
FKVWQDP+RGTV+GGMI+ELLISF RATGQKP+RIIFYRDGVSEGQFYQVLLYELDAIRK
Sbjct: 362 FKVWQDPQRGTVTGGMIKELLISFKRATGQKPQRIIFYRDGVSEGQFYQVLLYELDAIRK 541
Query: 394 ACASLESDYQPPVTFVVVQXRHHTRLFANNHNDNRAVDKSGNILPGTVVDSKICHPTEF 570
ACASLE +YQPPVTFVVVQ RHHTRLFANNHND+R VD+SGNILPGTVVDSKICHP F
Sbjct: 542 ACASLEPNYQPPVTFVVVQKRHHTRLFANNHNDHRTVDRSGNILPGTVVDSKICHPNRF 718
Score = 228 bits (493), Expect(2) = 2e-060
Identities = 108/173 (62%), Positives = 126/173 (72%)
Frame = -3 / -1
Query: 558 MADLRVHHSARQYVPAFIDSTXXXXXISKQPGVMTLLDHDKSNWRLVVRLQ*RTGLSNGI 379
MA+L +++S+RQYV A I+ST ISK+PGVM LLD+ KSNW LV+ LQ RT LSNGI
Sbjct: 706 MANL*INNSSRQYVSASINSTVIIVVISKKPGVMPLLDNYKSNWGLVIGLQGRTCLSNGI 527
Query: 378 KFIQQNLVELSLTDAIPVEYDPLWFLSSCPPERYEKLPDHATRDSPPFGILPYLEKILYX 199
KFIQ+NL+EL+L D IPV+YD L FLS CP ER EKL DHAT S GILPY +KILY
Sbjct: 526 KFIQKNLIELALADTIPVKYDSLGFLSGCPLERNEKLLDHATSHSSSLGILPYFKKILYQ 347
Query: 198 XXXMGLSTHQSCILCNLRPVLKSNHSCNGRTRIFPRMGMGHISTKDNSRYVTD 40
MGL + SCIL +LRPVL SNHS NGRT IF RM + +ISTK VTD
Sbjct: 346 FLPMGLGAN*SCILSDLRPVLGSNHSSNGRTGIFSRMRVCNISTKYYCWSVTD 188
Score = 226 bits (489), Expect = 1e-058
Identities = 109/173 (63%), Positives = 117/173 (67%)
Frame = -2 / -3
Query: 559 DGRSSSPPQCQAVCSRFYRQHDYHCDY*QTTWCDDAXGPRQK*LEAGSQTPMTHRPF*WH 380
DG+S + Q QAVC RFY+Q+ HC Y*Q WCD A G QK*L G+ P TH PF*WH
Sbjct: 707 DGKSLNQQQFQAVCFRFYQQYGDHCGY*QKAWCDAASGQLQK*LGVGNWAPRTHMPF*WH 528
Query: 379 QVHTTELGRIVPH*RHPCRI*SSLVSVQLPSRKI*EAP*SCHQRQSPFRDLAIP*KDPVS 200
QVHT EL R P * HPC+I* S VSV+LPS K *EAP*SCHQ Q F DLAI *KDPVS
Sbjct: 527 QVHTEELDRTGPR*HHPCKI*FSGVSVRLPS*KK*EAP*SCHQSQFLFGDLAIL*KDPVS 348
Query: 199 XXXDGLEHSPILHTL*PQASLEKQPQLQWKD*NLPQDGDGSHQHQR**SLCH* 41
GL ILHT *PQASL KQPQ QWKD NL QD HQHQ +CH*
Sbjct: 347 ILAYGLGR*LILHT**PQASLGKQPQQQWKDWNLLQDEGV*HQHQILLLVCH* 189
Score = 223 bits (482), Expect(3) = 2e-067
Identities = 102/126 (80%), Positives = 106/126 (84%)
Frame = -1 / -2
Query: 410 SNDAQAFLMASSSYNRTW*NCPSLTPSL*NMILFGFCPVALQKDMRSSLIMPPETVPLSG 231
S DA AFLMASSSY RT *N PSLTPSL*NMIL+GFCPVAL K+MRSSLIMPP TVPL G
Sbjct: 558 SKDAHAFLMASSSYRRT**NWPSLTPSL*NMILWGFCPVALLKEMRSSLIMPPVTVPLWG 379
Query: 230 SCHTLKRSCIXXXRWA*ALTNPAYFVTSGQS*KATTAAMEGLESSPGWGWVTSAPKIIVA 51
SCHTLKRSCI WA ALTNPAY VTSGQS +ATTAAMEGLESSPG G VTSAP IIV
Sbjct: 378 SCHTLKRSCINSCLWAWALTNPAYLVTSGQSWEATTAAMEGLESSPG*GCVTSAPNIIVG 199
Query: 50 MSLTPG 33
+SLT G
Sbjct: 198 LSLTRG 181
Score = 202 bits (436), Expect(2) = 7e-054
Identities = 91/141 (64%), Positives = 101/141 (71%)
Frame = +3 / +1
Query: 138 RLA*GYKVCRIGECSSPSXXXDTGSFQGMARSRKGDCLWWHDQGASHIFLEGNWTETKED 317
RLA*G+ VCRI SP DTGSF MARS K +C WWHDQGASH F EGN TET E+
Sbjct: 286 RLA*GH*VCRIS*RPSP*ARIDTGSF*SMARSPKRNCDWWHDQGASHFFQEGNRTETPEN 465
Query: 318 HILQGWRQ*GTILPSSVV*T*CH*KGLCVIGV*LPASSYFCRGPXASSHQVVC**SQ**S 497
HILQGW Q G +L SS V*T*CH*KG+CV+G LP SYFC P A+SHQ C** Q*
Sbjct: 466 HILQGWCQRGPVLSSSSV*T*CH*KGMCVLGAQLPTPSYFCSCPEAASHQAFC**PQ*SP 645
Query: 498 CCR*KREHTAWHCGGLEDLPS 560
C *KR+HTAW+C +DLPS
Sbjct: 646 YC**KRKHTAWNCC*FKDLPS 708
Score = 145 bits (311), Expect(2) = 1e-041
Identities = 73/105 (69%), Positives = 76/105 (72%)
Frame = +2 / +3
Query: 89 ILGKILVLPLQLWLLFKTGLRLQSMQDW*VLKPIXXX*YRIFSRYGKIPKGGLSLVA*SG 268
IL KI VLPL LWLL KTGLR SMQD KPI *YRIF +YGKIPK L LVA*S
Sbjct: 237 ILEKIPVLPLLLWLLPKTGLRSLSMQD*LAPKPIGKN*YRIFLKYGKIPKEEL*LVA*SR 416
Query: 269 SFSYLSGGQLDRNQRGSYSTGMASVRDNSTKFCCMNLMPLERPVR 403
SFS+LS GQ DRN R SY TGM S R +S KF CMNLMPLER VR
Sbjct: 417 SFSFLSRGQPDRNPRESYFTGMVSARASSIKFFCMNLMPLERHVR 551
Score = 46.9 bits (96), Expect(3) = 2e-067
Identities = 17/19 (89%), Positives = 18/19 (94%)
Frame = -1 / -2
Query: 569 NSVGWQIFESTTVPGSMFP 513
N +GWQIFESTTVPGSMFP
Sbjct: 717 NRLGWQIFESTTVPGSMFP 661
Score = 45.1 bits (92), Expect(2) = 1e-041
Identities = 22/34 (64%), Positives = 24/34 (70%)
Frame = +2 / +3
Query: 458 ITPGCLLIITMIIVLSIKAGTYCLALWWTRRSAI 559
ITPG LLI TMI VL I+A TYCL L +R AI
Sbjct: 606 ITPGFLLITTMITVLLIEAETYCLELLLIQRFAI 707
Score = 31.3 bits (62), Expect(2) = e-109
Identities = 11/14 (78%), Positives = 12/14 (85%)
Frame = +1 / +3
Query: 559 PTEFDFYLCSHAGI 600
PT+F FYLCSHA I
Sbjct: 708 PTDFGFYLCSHACI 749
Score = 29.0 bits (57), Expect(2) = 7e-054
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = +3 / +1
Query: 39 CQ*HSDYYLWC*CDPSPSWGR 101
CQ* ++ +WC*C SW R
Sbjct: 187 CQ*QTNNNIWC*CYTPSSWRR 249
Score = 25.4 bits (49), Expect(3) = 2e-067
Identities = 9/14 (64%), Positives = 11/14 (78%)
Frame = -3 / -3
Query: 600 NASMAAQVEIKLSW 559
NAS+A QVE K+ W
Sbjct: 749 NASVATQVESKIGW 708
Score = 24.4 bits (47), Expect(2) = 2e-060
Identities = 9/14 (64%), Positives = 10/14 (71%)
Frame = -1 / -1
Query: 599 MPAWLHR*KSNSVG 558
M AWLH+* SVG
Sbjct: 748 MQAWLHK*NPKSVG 707
>gb|BM100617.2|BM100617 EBma01_SQ005_L23_R maternal, 4 DPA, no treatment, cv Optic, EBma01
Hordeum vulgare subsp. vulgare cDNA clone
EBma01_SQ005_L23 5', mRNA sequence
Length = 670
Score = 208 bits (449), Expect(3) = e-106
Identities = 80/90 (88%), Positives = 84/90 (93%)
Frame = +1 / +3
Query: 496 RAVDKSGNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENNFTADGLQT 675
+ DKSGNILPGTVVD+ ICHPTEFDFYLCSHAGIQGTSRP HYHVL+DEN FTADGLQ
Sbjct: 399 KETDKSGNILPGTVVDTNICHPTEFDFYLCSHAGIQGTSRPTHYHVLFDENGFTADGLQQ 578
Query: 676 LTNNLCYTYARCTRSVSIVPPAYYAHLAAF 765
LTNNLCYTYARCTRSVS+VPPAYYAHLAAF
Sbjct: 579 LTNNLCYTYARCTRSVSVVPPAYYAHLAAF 668
Score = 155 bits (332), Expect(3) = e-106
Identities = 63/80 (78%), Positives = 70/80 (87%)
Frame = +1 / +3
Query: 247 VSGGMIRELLISFWRATGQKPKRIIFYRDGVSEGQFYQVLLYELDAIRKACASLESDYQP 426
V GGMIRELL+SF++ TG KP RIIFYRDGVSEGQF QVL+YE+DAIRKACASL++DYQP
Sbjct: 156 VHGGMIRELLVSFYKKTGYKPSRIIFYRDGVSEGQFAQVLMYEMDAIRKACASLQADYQP 335
Query: 427 PVTFVVVQXRHHTRLFANNH 486
VTFVVVQ RHHTRLF H
Sbjct: 336 KVTFVVVQKRHHTRLFPEVH 395
Score = 135 bits (289), Expect(3) = 9e-056
Identities = 57/75 (76%), Positives = 62/75 (82%)
Frame = -1 / -1
Query: 737 GGTIDTERVHLAYV*HKLLVRVCNPSAVKLFSSHRTW*WAGRLVP*MPAWLHR*KSNSVG 558
GGT +TERVH AYV*H+LLV C+PSAVK FSS RTW* G LVP*+PAWLHR*KSNSVG
Sbjct: 640 GGTTETERVHRAYV*HRLLVSCCSPSAVKPFSSKRTW**VGLLVP*IPAWLHR*KSNSVG 461
Query: 557 WQIFESTTVPGSMFP 513
W + STTVPG MFP
Sbjct: 460 WHMLVSTTVPGRMFP 416
Score = 96.8 bits (205), Expect(3) = 4e-039
Identities = 46/87 (52%), Positives = 59/87 (67%)
Frame = -3 / -3
Query: 765 EGCQVSIVCRRNNRY*ACAPSIRVTQVVGESLQPISRKVVLIPQNMVMGRAACSLNASMA 586
E QVS+V RRNNR A A S+ V QVVGE LQPI + V I ++MV+ +AC+LN MA
Sbjct: 668 ERSQVSVVGRRNNRDRASASSVCVAQVVGELLQPIGSETVFIEEDMVVSWSACALNTGMA 489
Query: 585 AQVEIKLSWMADLRVHHSARQYVPAFI 505
QVEIKL MA + V+H +R+ V F+
Sbjct: 488 TQVEIKLGGMAYVGVNHGSRKDVSTFV 408
Score = 85.8 bits (181), Expect(3) = 9e-056
Identities = 40/57 (70%), Positives = 42/57 (73%)
Frame = -1 / -1
Query: 416 SDSNDAQAFLMASSSYNRTW*NCPSLTPSL*NMILFGFCPVALQKDMRSSLIMPPET 246
S DAQAFLMAS SY RTW NCPSLTPSL*NMIL G PV L D +SLI+PP T
Sbjct: 325 SACKDAQAFLMASISYIRTWANCPSLTPSL*NMILLGL*PVFL*NDTNNSLIIPPCT 155
Score = 82.2 bits (173), Expect(2) = 2e-026
Identities = 39/86 (45%), Positives = 46/86 (53%)
Frame = -2 / -2
Query: 766 GRLPGEHSMQEEQSILSVCT*HTCNTSCW*EFATHQP*SCSHPTEHGNGQGGLFPECQHG 587
G PGE S QEEQ S C C+T CW* A H+ *+ H HG+ L PE +HG
Sbjct: 669 GTQPGERSRQEEQQRQSECIERMCSTGCW*AAAAHRQ*NRFHRRGHGSELVCLCPEYRHG 490
Query: 586 CTGRNQTQLDGRSSSPPQCQAVCSRF 509
TGRNQT+ DG P+ Q C F
Sbjct: 489 YTGRNQTRWDGICWCQPRFQEGCFHF 412
Score = 80.8 bits (170), Expect(2) = 3e-028
Identities = 43/83 (51%), Positives = 44/83 (53%)
Frame = +2 / +1
Query: 509 KAGTYCLALWWTRRSAIQLSLISTCAAMLAFREQAALPITMFCGMRTTLRLMGCKLSPTT 688
K T L W T AI SLISTC AM FR QA TM M+T MGC SPTT
Sbjct: 412 KVETSFLEPWLTPTYAIPPSLISTCVAMPVFRAQADQLTTMSSSMKTVSLPMGCSSSPTT 591
Query: 689 CVTRMLGAHAQYRLFLLHTMLTW 757
C T L A A LFLL T LTW
Sbjct: 592 CATHTLDALALSLLFLLPTTLTW 660
Score = 75.3 bits (158), Expect(3) = 4e-039
Identities = 34/74 (45%), Positives = 49/74 (66%)
Frame = -3 / -3
Query: 474 KQPGVMTLLDHDKSNWRLVVRLQ*RTGLSNGIKFIQQNLVELSLTDAIPVEYDPLWFLSS 295
++P VM LD++K ++ L++RLQ T L +GI FI QNL EL +PVEYDP F++S
Sbjct: 383 EEPCVMPFLDNNKCHFGLIIRLQRCTSLPDGIHFIHQNLGELPFAHTVPVEYDPAGFITS 204
Query: 294 CPPERYEKLPDHAT 253
E + LP+H+T
Sbjct: 203 LLIE*H**LPNHST 162
Score = 64.8 bits (135), Expect(2) = 3e-028
Identities = 30/76 (39%), Positives = 42/76 (55%)
Frame = +3 / +2
Query: 246 CLWWHDQGASHIFLEGNWTETKEDHILQGWRQ*GTILPSSVV*T*CH*KGLCVIGV*LPA 425
C W+D G + L +W T++DHILQG + + PSS V* CH +GLC+ L A
Sbjct: 155 CTRWND*GVISVIL*EDWL*TQQDHILQGRCERRAVRPSSDV*NGCHQEGLCIFAGGLSA 334
Query: 426 SSYFCRGPXASSHQVV 473
S C P +SH+ +
Sbjct: 335 QSDICCCPEKASHKAL 382
Score = 62.5 bits (130), Expect(3) = e-106
Identities = 28/48 (58%), Positives = 33/48 (68%)
Frame = +1 / +3
Query: 103 SSPSIAAVVAFQDWPEVTKYAGLVSAQAHRXXXIQDLFKVWQDPERGT 246
+SPSIAAVVA D PE+T Y +VSAQ R IQDL+ DPE+GT
Sbjct: 9 TSPSIAAVVASMDLPEITNYKAVVSAQPPRQEIIQDLYCQGTDPEKGT 152
Score = 57.4 bits (119), Expect(2) = 2e-026
Identities = 31/73 (42%), Positives = 36/73 (49%)
Frame = -2 / -2
Query: 463 CDDAXGPRQK*LEAGSQTPMTHRPF*WHQVHTTELGRIVPH*RHPCRI*SSLVSVQLPSR 284
CD G +Q L A + H+P *WH HT+ELGR PCRI*S V Q R
Sbjct: 372 CDAFSGQQQMSLWADNPPAKMHKPS*WHPFHTSELGRTALRSHRPCRI*SCWVYNQSSYR 193
Query: 283 KI*EAP*SCHQRQ 245
P*S H+ Q
Sbjct: 192 MTLITP*SFHRVQ 154
Score = 35.4 bits (71), Expect(3) = 9e-056
Identities = 24/55 (43%), Positives = 29/55 (52%)
Frame = -1 / -1
Query: 272 SSLIMPPETVPLSGSCHTLKRSCIXXXRWA*ALTNPAYFVTSGQS*KATTAAMEG 108
S +I P VP SGS RS I A T FV SG+S +ATTAA++G
Sbjct: 178 SLIIPPCTGVPFSGSVPWQ*RS*IISCLGGWAETTAL*FVISGRSMEATTAAIDG 14
Score = 28.1 bits (55), Expect(3) = 4e-039
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = -3 / -3
Query: 183 LSTHQSCILCNLRPVLKSNHSCNGR 109
L + S ++C+ R V +HSCN R
Sbjct: 89 LGRNHSFVICDFRKVHGGHHSCNRR 15
>gb|BE196054.2|BE196054 HVSMEh0091D21f Hordeum vulgare 5-45 DAP spike EST library
HVcDNA0009 (5 to 45 DAP) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEh0091D21f, mRNA sequence
Length = 914
Score = 366 bits (793), Expect(2) = e-101
Identities = 152/179 (84%), Positives = 160/179 (89%)
Frame = +1 / +1
Query: 76 VTHPHPGEDSSPSIAAVVAFQDWPEVTKYAGLVSAQAHRXXXIQDLFKVWQDPERGTVSG 255
VTHPHPGEDSSPSIAAVVA QDWPEVTKYAGLVSAQAHR IQDLFKVWQDP+RGTV+G
Sbjct: 1 VTHPHPGEDSSPSIAAVVASQDWPEVTKYAGLVSAQAHRQELIQDLFKVWQDPQRGTVTG 180
Query: 256 GMIRELLISFWRATGQKPKRIIFYRDGVSEGQFYQVLLYELDAIRKACASLESDYQPPVT 435
GMI+ELLISF RATGQKP+RIIFYRDGVSEGQFYQVL YELDAIRKACASLE +YQPPVT
Sbjct: 181 GMIKELLISFKRATGQKPQRIIFYRDGVSEGQFYQVLRYELDAIRKACASLEPNYQPPVT 360
Query: 436 FVVVQXRHHTRLFANNHNDNRAVDKSGNILPGTVVDSKICHPTEFDFYLCSHAGIQGTS 612
FVVVQ RHHT+LFANNHND R D+SGNILPGT SKI HP EFDFYLCSHA I+ S
Sbjct: 361 FVVVQKRHHTKLFANNHNDQRTGDRSGNILPGTGGGSKIWHPNEFDFYLCSHACIKEQS 537
Score = 240 bits (518), Expect = 1e-062
Identities = 112/175 (64%), Positives = 120/175 (68%)
Frame = -2 / -2
Query: 613 GLFPECQHGCTGRNQTQLDGRSSSPPQCQAVCSRFYRQHDYHCDY*QTTWCDDAXGPRQK 434
G P C+ G T RNQT+ D +S + QCQAVC RFY Q+ HC Y*Q WCD A G QK
Sbjct: 538 GFVP*CKRGYTSRNQTRSDAKSLNHHQCQAVCFRFYHQYVDHCGY*QKAWCDAASGQLQK 359
Query: 433 *LEAGSQTPMTHRPF*WHQVHTTELGRIVPH*RHPCRI*SSLVSVQLPSRKI*EAP*SCH 254
*L AG+ P TH PF*WHQVHT EL R P * HPC+I* S VSV+LPS K *EAP*SCH
Sbjct: 358 *LGAGNWAPRTHMPF*WHQVHTEELDRTGPR*HHPCKI*FSGVSVRLPS*KK*EAP*SCH 179
Query: 253 QRQSPFRDLAIP*KDPVSXXXDGLEHSPILHTL*PQASLEKQPQLQWKD*NLPQD 89
Q Q F DLAI *KDPVS GL ILHT *PQASL KQPQ QWKD NL QD
Sbjct: 178 QSQFLFGDLAIL*KDPVSILAYGLGR*LILHT**PQASLGKQPQQQWKDWNLLQD 14
Score = 227 bits (491), Expect = 7e-059
Identities = 111/175 (63%), Positives = 123/175 (70%)
Frame = -3 / -3
Query: 612 ACSLNASMAAQVEIKLSWMADLRVHHSARQYVPAFIDSTXXXXXISKQPGVMTLLDHDKS 433
A LNAS+A QVEIKL M +L SARQYV A I ST ISK+ GVM LLD+ KS
Sbjct: 537 ALFLNASVATQVEIKLVRMPNL*TTTSARQYVSASITSTLIIVVISKKLGVMPLLDNYKS 358
Query: 432 NWRLVVRLQ*RTGLSNGIKFIQQNLVELSLTDAIPVEYDPLWFLSSCPPERYEKLPDHAT 253
NW LV+ LQ RT LSNGIKFI +NL+EL+L D IPV+YD L FLS CP ER EKL DHAT
Sbjct: 357 NWGLVIGLQGRTCLSNGIKFIPKNLIELALADTIPVKYDSLGFLSGCPLERNEKLLDHAT 178
Query: 252 RDSPPFGILPYLEKILYXXXXMGLSTHQSCILCNLRPVLKSNHSCNGRTRIFPRM 88
S GILPY +KILY MGL + SCIL +LRPVL SNHS NGRT IF RM
Sbjct: 177 SHSSSLGILPYFKKILYQFLPMGLGAN*SCILSDLRPVLGSNHSSNGRTGIFSRM 13
Score = 210 bits (454), Expect = 9e-054
Identities = 100/159 (62%), Positives = 110/159 (69%)
Frame = +3 / +3
Query: 138 RLA*GYKVCRIGECSSPSXXXDTGSFQGMARSRKGDCLWWHDQGASHIFLEGNWTETKED 317
RLA*G+ VCRI SP DTGSF MARS K +C WWHDQGASH F EGN TET E+
Sbjct: 63 RLA*GH*VCRIS*RPSP*ARIDTGSF*SMARSPKRNCDWWHDQGASHFFQEGNRTETPEN 242
Query: 318 HILQGWRQ*GTILPSSVV*T*CH*KGLCVIGV*LPASSYFCRGPXASSHQVVC**SQ**S 497
HILQGW Q G +L SS V*T*CH*KG+CV+G LPA SYFC P A+SHQ C** Q* +
Sbjct: 243 HILQGWCQRGPVLSSSSV*T*CH*KGMCVLGAQLPAPSYFCSCPEAASHQAFC**PQ*ST 422
Query: 498 CCR*KREHTAWHCGGLEDLPSN*V*FLPVQPCWHSGNKP 614
*KR+HTAWH +DL S V*FL V P H G KP
Sbjct: 423 YW**KRKHTAWHWWWFKDLASERV*FLLV*PRLH*GTKP 539
Score = 200 bits (431), Expect(2) = 4e-061
Identities = 91/111 (81%), Positives = 94/111 (84%)
Frame = -1 / -1
Query: 410 SNDAQAFLMASSSYNRTW*NCPSLTPSL*NMILFGFCPVALQKDMRSSLIMPPETVPLSG 231
S DA AFLMASSSY RT *N PSLTPSL*NMIL+GFCPVAL K+MRSSLIMPP TVPL G
Sbjct: 335 SKDAHAFLMASSSYRRT**NWPSLTPSL*NMILWGFCPVALLKEMRSSLIMPPVTVPLWG 156
Query: 230 SCHTLKRSCIXXXRWA*ALTNPAYFVTSGQS*KATTAAMEGLESSPGWGWV 78
SCHTLKRSCI WA ALTNPAY VTSGQS +ATTAAMEGLESSPG G V
Sbjct: 155 SCHTLKRSCINSCLWAWALTNPAYLVTSGQSWEATTAAMEGLESSPG*GCV 3
Score = 139 bits (299), Expect(2) = 8e-046
Identities = 72/105 (68%), Positives = 75/105 (71%)
Frame = +2 / +2
Query: 89 ILGKILVLPLQLWLLFKTGLRLQSMQDW*VLKPIXXX*YRIFSRYGKIPKGGLSLVA*SG 268
IL KI VLPL LWLL KTGLR SMQD KPI *YRIF +YGKIPK L LVA*S
Sbjct: 14 ILEKIPVLPLLLWLLPKTGLRSLSMQD*LAPKPIGKN*YRIFLKYGKIPKEEL*LVA*SR 193
Query: 269 SFSYLSGGQLDRNQRGSYSTGMASVRDNSTKFCCMNLMPLERPVR 403
SFS+LS GQ DRN R SY TGM S R +S KF MNLMPLER VR
Sbjct: 194 SFSFLSRGQPDRNPRESYFTGMVSARASSIKFFGMNLMPLERHVR 328
Score = 64.8 bits (135), Expect(2) = 8e-046
Identities = 32/52 (61%), Positives = 36/52 (69%)
Frame = +2 / +2
Query: 458 ITPGCLLIITMIIVLSIKAGTYCLALWWTRRSAIQLSLISTCAAMLAFREQA 613
ITP LLI TMI VL I+A TYCLAL +R I+ SLISTC A LA R +A
Sbjct: 383 ITPSFLLITTMINVLVIEAETYCLALVVVQRFGIRTSLISTCVATLALRNKA 538
Score = 55.6 bits (115), Expect(2) = 4e-061
Identities = 24/34 (70%), Positives = 25/34 (73%)
Frame = -1 / -1
Query: 614 RLVP*MPAWLHR*KSNSVGWQIFESTTVPGSMFP 513
RL M AWLH+*KSNS G QIFE VPGSMFP
Sbjct: 539 RLCSLMQAWLHK*KSNSFGCQIFEPPPVPGSMFP 438
Score = 22.1 bits (42), Expect(2) = e-101
Identities = 6/8 (75%), Positives = 8/8 (100%)
Frame = +1 / +2
Query: 631 VLWDENNF 654
+LWDENN+
Sbjct: 554 LLWDENNY 577
>gb|BG415995.2|BG415995 HVSMEk0009F13f Hordeum vulgare testa/pericarp EST library
HVcDNA0013 (normal) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEk0009F13f, mRNA sequence
Length = 970
Score = 310 bits (671), Expect(2) = 3e-096
Identities = 123/130 (94%), Positives = 125/130 (96%)
Frame = +1 / +1
Query: 430 VTFVVVQXRHHTRLFANNHNDNRAVDKSGNILPGTVVDSKICHPTEFDFYLCSHAGIQGT 609
VTFVVVQ RHHTRLFANNHND R VD+SGNILPGTVVDSKICHPTEFDFYLCSHAGIQGT
Sbjct: 1 VTFVVVQKRHHTRLFANNHNDQRTVDRSGNILPGTVVDSKICHPTEFDFYLCSHAGIQGT 180
Query: 610 SRPAHYHVLWDENNFTADGLQTLTNNLCYTYARCTRSVSIVPPAYYAHLAAFRARFYMEP 789
SRPAHYHVLWDEN FTAD LQTLTNNLCYTYARCTRSVSIVPPAYYAHLAAFRARFYMEP
Sbjct: 181 SRPAHYHVLWDENKFTADELQTLTNNLCYTYARCTRSVSIVPPAYYAHLAAFRARFYMEP 360
Query: 790 DTSDSGSMAS 819
DTSDSGS+AS
Sbjct: 361 DTSDSGSVAS 390
Score = 196 bits (423), Expect(2) = 9e-060
Identities = 84/131 (64%), Positives = 90/131 (68%)
Frame = -2 / -1
Query: 823 HGLP*IHCHSYLAPCRTELGRLPGEHSMQEEQSILSVCT*HTCNTSCW*EFATHQP*SCS 644
H P C APCRTE GRLP HSMQEEQSI S C HTC+T C *EFATHQ * CS
Sbjct: 394 HRSPRTRCRRCPAPCRTEPGRLPDGHSMQEEQSIQSGCIEHTCSTGCL*EFATHQQ*ICS 215
Query: 643 HPTEHGNGQGGLFPECQHGCTGRNQTQLDGRSSSPPQCQAVCSRFYRQHDYHCDY*QTTW 464
P EH +GQ GLFPECQHG T RN+ DGRSS+ +CQAVCSRFYRQ+ HCD *Q
Sbjct: 214 RPREHDSGQAGLFPECQHGYTSRNRILSDGRSSNQQRCQAVCSRFYRQYADHCDC*QKA* 35
Query: 463 CDDAXGPRQK* 431
C DA G QK*
Sbjct: 34 CGDASGQPQK* 2
Score = 189 bits (408), Expect(2) = 3e-054
Identities = 86/131 (65%), Positives = 100/131 (76%)
Frame = -3 / -2
Query: 822 TACHRSTVTRIWLHVEPSSEGCQVSIVCRRNNRY*ACAPSIRVTQVVGESLQPISRKVVL 643
TA H V + LHVEPS EGCQ+ IVCRRNNRY A A SIRV QVV ESLQ IS K VL
Sbjct: 393 TARHGPAVGGVRLHVEPSPEGCQMGIVCRRNNRYRAGASSIRVAQVVCESLQLISSKFVL 214
Query: 642 IPQNMVMGRAACSLNASMAAQVEIKLSWMADLRVHHSARQYVPAFIDSTXXXXXISKQPG 463
+P+NM++GR ACSLNASMA QVEI+ MADLR+++ ARQYVPA IDST +SK+P
Sbjct: 213 VPENMIVGRPACSLNASMATQVEIEFCRMADLRINNGARQYVPASIDSTLIIVIVSKKPS 34
Query: 462 VMTLLDHDKSN 430
V+TLLD+ KSN
Sbjct: 33 VVTLLDNHKSN 1
Score = 182 bits (391), Expect(2) = 3e-051
Identities = 84/123 (68%), Positives = 89/123 (72%)
Frame = +2 / +2
Query: 455 VITPGCLLIITMIIVLSIKAGTYCLALWWTRRSAIQLSLISTCAAMLAFREQAALPITMF 634
V T G LL ITMI VLSI+AGTYCLA RRSAI+ + ISTC AMLAFREQA LP MF
Sbjct: 26 VTTLGFLLTITMISVLSIEAGTYCLAPLLIRRSAIRQNSISTCVAMLAFREQAGLPTIMF 205
Query: 635 CGMRTTLRLMGCKLSPTTCVTRMLGAHAQYRLFLLHTMLTWQPSELGSTWSQIRVTVDLW 814
G RT L LM CKLS TTC TRML A A YRLFLLHTM WQPS LGSTWS+ T W
Sbjct: 206 SGTRTNLLLMSCKLSQTTCATRMLDAPALYRLFLLHTMPIWQPSGLGSTWSRTPPTAGPW 385
Query: 815 QAV 823
+AV
Sbjct: 386 RAV 394
Score = 180 bits (387), Expect(2) = 1e-047
Identities = 81/102 (79%), Positives = 83/102 (81%)
Frame = -1 / -3
Query: 818 LAIDPLSLVSGSM*NXXXXXXXXXXXAGGTIDTERVHLAYV*HKLLVRVCNPSAVKLFSS 639
LA DPLS VSGSM*N AGGTIDTERVH AYV*H+L VRVCN SAV LFSS
Sbjct: 389 LATDPLSEVSGSM*NRARKAARWA*YAGGTIDTERVHRAYV*HRLFVRVCNSSAVNLFSS 210
Query: 638 HRTW*WAGRLVP*MPAWLHR*KSNSVGWQIFESTTVPGSMFP 513
RT *WAGRLVP*MPAWLH+*KSNSVGWQIFESTTVPGSMFP
Sbjct: 209 QRT**WAGRLVP*MPAWLHK*KSNSVGWQIFESTTVPGSMFP 84
Score = 141 bits (302), Expect(3) = 7e-041
Identities = 62/94 (65%), Positives = 69/94 (73%)
Frame = +3 / +3
Query: 432 YFCRGPXASSHQVVC**SQ**SCCR*KREHTAWHCGGLEDLPSN*V*FLPVQPCWHSGNK 611
YFC P AS H C* SQ* + CR*KREHTAWH EDLPS+ + FL V PCWHSGNK
Sbjct: 3 YFCGCPEASPH*AFC*QSQ*SAYCR*KREHTAWHRC*FEDLPSDRIRFLLV*PCWHSGNK 182
Query: 612 PPCPLPCSVG*EQLYG*WVANSHQQLVLHVC*VH 713
P CPL CS+G EQ+Y * VANSH+Q VLHVC +H
Sbjct: 183 PACPLSCSLGREQIYC**VANSHKQPVLHVCSMH 284
Score = 62.9 bits (131), Expect(2) = 3e-096
Identities = 26/28 (92%), Positives = 26/28 (92%)
Frame = +1 / +2
Query: 853 AAGVGNVAVRPLPALKENVKRVMFYC*D 936
A G GNVAVRPLPALKENVKRVMFYC*D
Sbjct: 431 APGFGNVAVRPLPALKENVKRVMFYC*D 514
Score = 54.7 bits (113), Expect(2) = 9e-060
Identities = 24/28 (85%), Positives = 24/28 (85%)
Frame = -1 / -2
Query: 935 S*Q*NMTRFTFSLRAGNGLTATFPTPAA 852
S*Q*NMTR TFSLRAG GLTATFP P A
Sbjct: 513 S*Q*NMTRLTFSLRAGRGLTATFPKPGA 430
Score = 43.2 bits (88), Expect(2) = 3e-054
Identities = 18/30 (60%), Positives = 22/30 (73%)
Frame = -3 / -1
Query: 948 LTASVLAVEHDPLHVFLEGR*WPHSNIPNT 859
+TA +LAV+HD L VFLEG P SN+P T
Sbjct: 526 VTARILAVKHDALDVFLEGGERPDSNVPKT 437
Score = 40.9 bits (83), Expect(2) = 3e-051
Identities = 15/30 (50%), Positives = 18/30 (60%)
Frame = +3 / +1
Query: 834 RGAQHQGCRCWECCCEAITCPQGKREAGHV 923
+G R WE CC+A PQGKR+A HV
Sbjct: 412 QGGPRSSTRFWERCCQASPRPQGKRQARHV 501
Score = 37.3 bits (75), Expect(3) = 7e-041
Identities = 21/37 (56%), Positives = 23/37 (62%)
Frame = +2 / +3
Query: 836 GGATPRLPVLGMLL*GHYLPSRKT*SGSCSTAKTDAV 946
G +T + VLG LL G PSRKT S SC TAK AV
Sbjct: 414 GRSTQQHQVLGTLLSGLSPPSRKTSSASCFTAKILAV 524
Score = 30.9 bits (61), Expect(2) = 1e-047
Identities = 17/29 (58%), Positives = 20/29 (68%)
Frame = -2 / -3
Query: 946 NSISLSSRT*PASRFP*GQVMASQQHSQH 860
N LSS+T* A RFP*G+ A QQ SQ+
Sbjct: 524 NCEDLSSKT*RA*RFP*GRGEA*QQRSQN 438
Score = 27.6 bits (54), Expect(3) = 7e-041
Identities = 12/21 (57%), Positives = 15/21 (71%)
Frame = +3 / +3
Query: 756 GSLPSSVLHGARYE*QWIYGK 818
GSLP SVLHGA + Q + G+
Sbjct: 327 GSLPGSVLHGAGHLRQRVRGE 389
>gb|BG417425.2|BG417425 HVSMEk0017E11f Hordeum vulgare testa/pericarp EST library
HVcDNA0013 (normal) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEk0017E11f, mRNA sequence
Length = 689
Score = 326 bits (706), Expect = 1e-088
Identities = 134/151 (88%), Positives = 142/151 (94%)
Frame = +1 / +1
Query: 40 VSDIATIIFGADVTHPHPGEDSSPSIAAVVAFQDWPEVTKYAGLVSAQAHRXXXIQDLFK 219
V+D TIIFGADVTHPHPGEDSSPSIAAVVA QDWPE+TKYAGLVSAQAHR IQDLFK
Sbjct: 232 VTDRPTIIFGADVTHPHPGEDSSPSIAAVVASQDWPEITKYAGLVSAQAHRQELIQDLFK 411
Query: 220 VWQDPERGTVSGGMIRELLISFWRATGQKPKRIIFYRDGVSEGQFYQVLLYELDAIRKAC 399
VWQDP+RGTV+GGMI+ELLISF RATGQKP+RIIFYRDGVSEGQFYQVLL+ELDAIRKAC
Sbjct: 412 VWQDPQRGTVTGGMIKELLISFKRATGQKPQRIIFYRDGVSEGQFYQVLLFELDAIRKAC 591
Query: 400 ASLESDYQPPVTFVVVQXRHHTRLFANNHND 492
ASLE +YQPPVTFVVVQ RHHTRLFANNHND
Sbjct: 592 ASLEPNYQPPVTFVVVQKRHHTRLFANNHND 684
Score = 230 bits (496), Expect = 1e-059
Identities = 103/124 (83%), Positives = 106/124 (85%)
Frame = -1 / -1
Query: 410 SNDAQAFLMASSSYNRTW*NCPSLTPSL*NMILFGFCPVALQKDMRSSLIMPPETVPLSG 231
S DAQAFLMASSS NRTW*NCPSLTPSL*NMIL GFCPVAL KDMRSSLIMPP TVPL G
Sbjct: 602 SKDAQAFLMASSSNNRTW*NCPSLTPSL*NMIL*GFCPVALLKDMRSSLIMPPVTVPLWG 423
Query: 230 SCHTLKRSCIXXXRWA*ALTNPAYFVTSGQS*KATTAAMEGLESSPGWGWVTSAPKIIVA 51
SCHTLKRSCI WA ALTNPAY V SGQS*+ATTAAMEGLESSPG G VTSAP I+V
Sbjct: 422 SCHTLKRSCISSCLWAWALTNPAYLVISGQS*EATTAAMEGLESSPG*GCVTSAPNIMVG 243
Query: 50 MSLT 39
S+T
Sbjct: 242 RSVT 231
Score = 214 bits (462), Expect = 7e-055
Identities = 95/146 (65%), Positives = 108/146 (73%)
Frame = -3 / -3
Query: 477 SKQPGVMTLLDHDKSNWRLVVRLQ*RTGLSNGIKFIQQNLVELSLTDAIPVEYDPLWFLS 298
SK+P V+TLLD+ KSNWRL++ LQ TGL NGIKF QQNLVELSL D IPV+YD L FL
Sbjct: 669 SKKPSVVTLLDNHKSNWRLIIWLQGCTGLPNGIKFKQQNLVELSLADTIPVKYDSLRFLP 490
Query: 297 SCPPERYEKLPDHATRDSPPFGILPYLEKILYXXXXMGLSTHQSCILCNLRPVLKSNHSC 118
SCP ERYEKL DHA S GILPY +KILY MGL TH SC+L LRPVL+SNHSC
Sbjct: 489 SCPLERYEKLLDHAASHSSSLGILPYFKKILYQLLPMGLGTH*SCVLSYLRPVLRSNHSC 310
Query: 117 NGRTRIFPRMGMGHISTKDNSRYVTD 40
NGR IF R+ M +ISTK R V++
Sbjct: 309 NGRAGIFSRVRMCNISTKYYGRSVSN 232
Score = 194 bits (418), Expect = 8e-049
Identities = 89/151 (58%), Positives = 98/151 (64%)
Frame = +3 / +3
Query: 39 CQ*HSDYYLWC*CDPSPSWGRXXXXXXXXXXXXRLA*GYKVCRIGECSSPSXXXDTGSFQ 218
C * +D+ +WC*C S W R RLA* V RI EC SP DTGSF
Sbjct: 231 CY*PTDHNIWC*CYTSSPWRRFQPFHCSCGCFSRLA*DN*VRRISECPSP*ARADTGSF* 410
Query: 219 GMARSRKGDCLWWHDQGASHIFLEGNWTETKEDHILQGWRQ*GTILPSSVV*T*CH*KGL 398
MARS K +C W HDQGASHIF EGNW ET E+HILQGW Q GT+LPSSVV*T*CH*+GL
Sbjct: 411 SMARSPKRNCDWRHDQGASHIFQEGNWAETSENHILQGWCQRGTVLPSSVV*T*CH*EGL 590
Query: 399 CVIGV*LPASSYFCRGPXASSHQVVC**SQ* 491
C++G L SSYFC P AS H C* SQ*
Sbjct: 591 CILGAKLSTSSYFCGCPEASPH*AFC*QSQ* 683
Score = 192 bits (413), Expect = 4e-048
Identities = 94/142 (66%), Positives = 96/142 (67%)
Frame = -2 / -2
Query: 490 HCDY*QTTWCDDAXGPRQK*LEAGSQTPMTHRPF*WHQVHTTELGRIVPH*RHPCRI*SS 311
HCD *Q C DA G QK*LE + P HRP *WHQV TTELGR VP * HPC+I* S
Sbjct: 682 HCDC*QKA*CGDASGQPQK*LEVDNLAPRMHRPS*WHQVQTTELGRTVPR*HHPCKI*FS 503
Query: 310 LVSVQLPSRKI*EAP*SCHQRQSPFRDLAIP*KDPVSXXXDGLEHSPILHTL*PQASLEK 131
VS QLPS KI*EAP*SC Q Q F DLAI *KDPVS GL HS IL T QASLEK
Sbjct: 502 EVSAQLPS*KI*EAP*SCRQSQFLFGDLAIL*KDPVSALAYGLGHSLILRT*LSQASLEK 323
Query: 130 QPQLQWKD*NLPQDGDGSHQHQ 65
QPQLQWK NL Q D HQHQ
Sbjct: 322 QPQLQWKGWNLLQGEDV*HQHQ 257
Score = 155 bits (334), Expect = 3e-037
Identities = 74/103 (71%), Positives = 77/103 (74%)
Frame = +2 / +2
Query: 92 LGKILVLPLQLWLLFKTGLRLQSMQDW*VLKPIXXX*YRIFSRYGKIPKGGLSLVA*SGS 271
L KI LPLQLWLL KTGLR S QD *V KPI *YRIF +YGKIPK L L A*S S
Sbjct: 284 LEKIPALPLQLWLLLKTGLR*LSTQD**VPKPIGKS*YRIFLKYGKIPKEEL*LAA*SRS 463
Query: 272 FSYLSGGQLDRNQRGSYSTGMASVRDNSTKFCCMNLMPLERPV 400
FSYLS GQL RN R SY TGM S RD+STKFCC+NLMPL RPV
Sbjct: 464 FSYLSRGQLGRNLRESYFTGMVSARDSSTKFCCLNLMPLGRPV 592
>gb|CB874722.1|CB874722 HX06C02w HX Hordeum vulgare subsp. vulgare cDNA clone HX06C02
3-PRIME, mRNA sequence
Length = 645
Score = 272 bits (589), Expect(2) = 2e-087
Identities = 107/113 (94%), Positives = 109/113 (96%)
Frame = +1 / -2
Query: 481 NHNDNRAVDKSGNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENNFTA 660
NHND R VD+SGNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDEN FTA
Sbjct: 644 NHNDQRTVDRSGNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENKFTA 465
Query: 661 DGLQTLTNNLCYTYARCTRSVSIVPPAYYAHLAAFRARFYMEPDTSDSGSMAS 819
D LQTLTNNLCYTYARCTRSVSIVPPAYYAHLAAFRARFYMEPDTSDSGS+AS
Sbjct: 464 DELQTLTNNLCYTYARCTRSVSIVPPAYYAHLAAFRARFYMEPDTSDSGSVAS 306
Score = 182 bits (392), Expect(2) = 2e-056
Identities = 75/114 (65%), Positives = 81/114 (71%)
Frame = -2 / +2
Query: 823 HGLP*IHCHSYLAPCRTELGRLPGEHSMQEEQSILSVCT*HTCNTSCW*EFATHQP*SCS 644
H P C APCRTE GRLP HSMQEEQSI S C HTC+T C *EFATHQ * CS
Sbjct: 302 HRSPRTRCRRCPAPCRTEPGRLPDGHSMQEEQSIQSGCIEHTCSTGCL*EFATHQQ*ICS 481
Query: 643 HPTEHGNGQGGLFPECQHGCTGRNQTQLDGRSSSPPQCQAVCSRFYRQHDYHCD 482
P EH +GQ GLFPECQHG T RN+ DGRSS+ +CQAVCSRFYRQ+ HCD
Sbjct: 482 RPREHDSGQAGLFPECQHGYTSRNRILSDGRSSNQQRCQAVCSRFYRQYADHCD 643
Score = 180 bits (387), Expect(2) = 6e-053
Identities = 81/102 (79%), Positives = 83/102 (81%)
Frame = -1 / +1
Query: 818 LAIDPLSLVSGSM*NXXXXXXXXXXXAGGTIDTERVHLAYV*HKLLVRVCNPSAVKLFSS 639
LA DPLS VSGSM*N AGGTIDTERVH AYV*H+L VRVCN SAV LFSS
Sbjct: 307 LATDPLSEVSGSM*NRARKAARWA*YAGGTIDTERVHRAYV*HRLFVRVCNSSAVNLFSS 486
Query: 638 HRTW*WAGRLVP*MPAWLHR*KSNSVGWQIFESTTVPGSMFP 513
RT *WAGRLVP*MPAWLH+*KSNSVGWQIFESTTVPGSMFP
Sbjct: 487 QRT**WAGRLVP*MPAWLHK*KSNSVGWQIFESTTVPGSMFP 612
Score = 174 bits (375), Expect(2) = 3e-050
Identities = 79/114 (69%), Positives = 84/114 (73%)
Frame = +2 / -3
Query: 482 ITMIIVLSIKAGTYCLALWWTRRSAIQLSLISTCAAMLAFREQAALPITMFCGMRTTLRL 661
ITMI VLSI+AGTYCLA RRSAI+ + ISTC AMLAFREQA LP MF G RT L L
Sbjct: 643 ITMISVLSIEAGTYCLAPLLIRRSAIRQNSISTCVAMLAFREQAGLPTIMFSGTRTNLLL 464
Query: 662 MGCKLSPTTCVTRMLGAHAQYRLFLLHTMLTWQPSELGSTWSQIRVTVDLWQAV 823
M CKLS TTC TRML A A YRLFLLHTM WQPS LGSTWS+ T W+AV
Sbjct: 463 MSCKLSQTTCATRMLDAPALYRLFLLHTMPIWQPSGLGSTWSRTPPTAGPWRAV 302
Score = 166 bits (358), Expect(2) = 1e-043
Identities = 75/109 (68%), Positives = 85/109 (77%)
Frame = -3 / +3
Query: 822 TACHRSTVTRIWLHVEPSSEGCQVSIVCRRNNRY*ACAPSIRVTQVVGESLQPISRKVVL 643
TA H V + LHVEPS EGCQ+ IVCRRNNRY A A SIRV QVV ESLQ IS K VL
Sbjct: 303 TARHGPAVGGVRLHVEPSPEGCQMGIVCRRNNRYRAGASSIRVAQVVCESLQLISSKFVL 482
Query: 642 IPQNMVMGRAACSLNASMAAQVEIKLSWMADLRVHHSARQYVPAFIDST 496
+P+NM++GR ACSLNASMA QVEI+ MADLR+++ ARQYVPA IDST
Sbjct: 483 VPENMIVGRPACSLNASMATQVEIEFCRMADLRINNGARQYVPASIDST 629
Score = 123 bits (263), Expect(3) = 9e-035
Identities = 53/77 (68%), Positives = 60/77 (77%)
Frame = +3 / -1
Query: 483 SQ**SCCR*KREHTAWHCGGLEDLPSN*V*FLPVQPCWHSGNKPPCPLPCSVG*EQLYG* 662
SQ* + CR*KREHTAWH EDLPS+ + FL V PCWHSGNKP CPL CS+G EQ+Y *
Sbjct: 642 SQ*SAYCR*KREHTAWHRC*FEDLPSDRIRFLLV*PCWHSGNKPACPLSCSLGREQIYC* 463
Query: 663 WVANSHQQLVLHVC*VH 713
VANSH+Q VLHVC +H
Sbjct: 462 *VANSHKQPVLHVCSMH 412
Score = 70.7 bits (148), Expect(2) = 2e-087
Identities = 31/47 (65%), Positives = 34/47 (72%)
Frame = +1 / -2
Query: 796 SDSGSMASRGPPPGGRNTKAAGVGNVAVRPLPALKENVKRVMFYC*D 936
S S + +RG PP G + GNVAVRPLPALKENVKRVMFYC*D
Sbjct: 323 SGSVASGARGGPPQGGPRSSTRFGNVAVRPLPALKENVKRVMFYC*D 183
Score = 57.9 bits (120), Expect(2) = 2e-056
Identities = 28/39 (71%), Positives = 28/39 (71%)
Frame = -1 / +1
Query: 935 S*Q*NMTRFTFSLRAGNGLTATFPTPAALVLRPPGGGPR 819
S*Q*NMTR TFSLRAG GLTATFP L P GG PR
Sbjct: 184 S*Q*NMTRLTFSLRAGRGLTATFPNLVLLRGPPCGGPPR 300
Score = 48.3 bits (99), Expect(2) = 6e-053
Identities = 22/47 (46%), Positives = 27/47 (57%)
Frame = -3 / +3
Query: 948 LTASVLAVEHDPLHVFLEGR*WPHSNIPNTGSLGVAPPWWRATACHR 808
+TA +LAV+HD L VFLEG P SN+P G+ W AT R
Sbjct: 171 VTARILAVKHDALDVFLEGGERPDSNVPKPGAAAWTALWRTATCTAR 311
Score = 44.6 bits (91), Expect(2) = 3e-050
Identities = 17/34 (50%), Positives = 21/34 (61%)
Frame = +3 / -1
Query: 822 WPSTRGAQHQGCRCWECCCEAITCPQGKREAGHV 923
W S+ G Q + WE CC+A PQGKR+A HV
Sbjct: 297 WRSSTGRSTQQHQVWERCCQASPRPQGKRQARHV 196
Score = 34.5 bits (69), Expect(3) = 9e-035
Identities = 19/30 (63%), Positives = 19/30 (63%)
Frame = +2 / -3
Query: 857 PVLGMLL*GHYLPSRKT*SGSCSTAKTDAV 946
P LG LL G PSRKT S SC TAK AV
Sbjct: 262 PGLGTLLSGLSPPSRKTSSASCFTAKILAV 173
Score = 30.4 bits (60), Expect(2) = 1e-043
Identities = 17/28 (60%), Positives = 19/28 (67%)
Frame = -2 / +2
Query: 946 NSISLSSRT*PASRFP*GQVMASQQHSQ 863
N LSS+T* A RFP*G+ A QQ SQ
Sbjct: 173 NCEDLSSKT*RA*RFP*GRGEA*QQRSQ 256
Score = 27.6 bits (54), Expect(3) = 9e-035
Identities = 12/21 (57%), Positives = 15/21 (71%)
Frame = +3 / -1
Query: 756 GSLPSSVLHGARYE*QWIYGK 818
GSLP SVLHGA + Q + G+
Sbjct: 369 GSLPGSVLHGAGHLRQRVRGE 307
>gb|AV916245.1|AV916245 AV916245 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags12e13 5', mRNA sequence
Length = 481
Score = 239 bits (516), Expect(2) = 3e-086
Identities = 91/98 (92%), Positives = 97/98 (98%)
Frame = +1 / +1
Query: 499 AVDKSGNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENNFTADGLQTL 678
++DKSGNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENNF+AD +QTL
Sbjct: 184 SMDKSGNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENNFSADEMQTL 363
Query: 679 TNNLCYTYARCTRSVSIVPPAYYAHLAAFRARFYMEPD 792
TNNLCYTYARCTRSVS+VPPAYYAHLAAFRARFYMEP+
Sbjct: 364 TNNLCYTYARCTRSVSVVPPAYYAHLAAFRARFYMEPE 477
Score = 126 bits (270), Expect(2) = 5e-035
Identities = 62/93 (66%), Positives = 65/93 (69%)
Frame = -1 / -3
Query: 791 SGSM*NXXXXXXXXXXXAGGTIDTERVHLAYV*HKLLVRVCNPSAVKLFSSHRTW*WAGR 612
SGSM*N AGGT +TERVH A V* +L V VC SA KLFSS RTW* AG
Sbjct: 476 SGSM*NRARNAARCA*YAGGTTETERVHRA*V*QRLFVNVCISSAEKLFSSQRTW**AGL 297
Query: 611 LVP*MPAWLHR*KSNSVGWQIFESTTVPGSMFP 513
LVP +PA L R*KSNSVGW IFESTTVPG MFP
Sbjct: 296 LVPWIPA*LQR*KSNSVGWHIFESTTVPGKMFP 198
Score = 100 bits (213), Expect(2) = 3e-086
Identities = 41/44 (93%), Positives = 42/44 (95%)
Frame = +1 / +2
Query: 334 GVSEGQFYQVLLYELDAIRKACASLESDYQPPVTFVVVQXRHHT 465
GVSEGQFYQVLLYELDAIRKACASLE +YQPPVTFVVVQ RHHT
Sbjct: 17 GVSEGQFYQVLLYELDAIRKACASLEPNYQPPVTFVVVQKRHHT 148
Score = 90.0 bits (190), Expect(2) = 6e-024
Identities = 40/97 (41%), Positives = 65/97 (67%)
Frame = -3 / -2
Query: 786 LHVEPSSEGCQVSIVCRRNNRY*ACAPSIRVTQVVGESLQPISRKVVLIPQNMVMGRAAC 607
LHVEP E Q+ ++CR ++ A AP + V +VV + L + +VVLIP++MV+ C
Sbjct: 471 LHVEPRPECSQMRVICRWDDGNRARAPCVSVAKVVCQRLHFVC*EVVLIPEDMVVSWPTC 292
Query: 606 SLNASMAAQVEIKLSWMADLRVHHSARQYVPAFIDST 496
+L++S+ +VEIKL W+A LR+++S+R V F+ +T
Sbjct: 291 TLDSSVTTEVEIKLRWVAYLRINNSSR*NVSTFVHAT 181
Score = 41.8 bits (85), Expect(2) = 5e-035
Identities = 20/45 (44%), Positives = 31/45 (68%)
Frame = -3 / -1
Query: 462 VMTLLDHDKSNWRLVVRLQ*RTGLSNGIKFIQQNLVELSLTDAIP 328
++TLL+ DK RLV+ T L++ I+ I++NLVEL+ T+A P
Sbjct: 145 MVTLLNDDKRYRRLVIWF*GCTSLTDSIQLIKENLVELAFTNAXP 11
Score = 41.4 bits (84), Expect(2) = 6e-024
Identities = 18/26 (69%), Positives = 20/26 (76%)
Frame = -1 / -2
Query: 410 SNDAQAFLMASSSYNRTW*NCPSLTP 333
S DAQA +AS+S RTW*N PSLTP
Sbjct: 93 SRDAQALRIASNS*RRTW*NWPSLTP 16
>gb|CB874756.1|CB874756 HX06D16w HX Hordeum vulgare subsp. vulgare cDNA clone HX06D16
3-PRIME, mRNA sequence
Length = 635
Score = 314 bits (679), Expect = 8e-085
Identities = 129/149 (86%), Positives = 130/149 (87%)
Frame = +1 / -3
Query: 487 NDNRAVDKSGNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENNFTADG 666
ND R VD+SG ILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDEN FTAD
Sbjct: 633 NDQRTVDRSGXILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENKFTADE 454
Query: 667 LQTLTNNLCYTYARCTRSVSIVPPAYYAHLAAFRARFYMEPDTSDSGSMASRGPPPGGRN 846
LQTLTNNLCYTYARCTRSVSIVPPAYYAHLAAFRARFYMEPDTSDSGSMAS P
Sbjct: 453 LQTLTNNLCYTYARCTRSVSIVPPAYYAHLAAFRARFYMEPDTSDSGSMASGARGPPQGG 274
Query: 847 TKAAGVGNVAVRPLPALKENVKRVMFYC* 933
GNVAVRPLPALKENVKRVMFYC*
Sbjct: 273 RNNRAFGNVAVRPLPALKENVKRVMFYC* 187
Score = 216 bits (466), Expect = 2e-055
Identities = 104/140 (74%), Positives = 106/140 (75%)
Frame = -1 / +2
Query: 932 *Q*NMTRFTFSLRAGNGLTATFPTPAALVLRPPGGGPRLAIDPLSLVSGSM*NXXXXXXX 753
*Q*NMTRFTFS RAG GLTATFP L G LA+DPLS VSGSM*N
Sbjct: 188 *Q*NMTRFTFSFRAGRGLTATFPNALLLRPPCGGPRAPLAMDPLSEVSGSM*NRARKAAK 367
Query: 752 XXXXAGGTIDTERVHLAYV*HKLLVRVCNPSAVKLFSSHRTW*WAGRLVP*MPAWLHR*K 573
AGGTIDTERVHLAYV*HKL VRVCN SAV LFSSH T * AGRLVP*MPAWLH+*K
Sbjct: 368 CA*YAGGTIDTERVHLAYV*HKLFVRVCNSSAVNLFSSHST***AGRLVP*MPAWLHK*K 547
Query: 572 SNSVGWQIFESTTVPGSMFP 513
SNSVGWQIFESTTVPGSM P
Sbjct: 548 SNSVGWQIFESTTVPGSMXP 607
Score = 168 bits (362), Expect(3) = 4e-051
Identities = 70/114 (61%), Positives = 79/114 (69%)
Frame = -2 / +3
Query: 826 GHGLP*IHCHSYLAPCRTELGRLPGEHSMQEEQSILSVCT*HTCNTSCW*EFATHQP*SC 647
GH LP H APC+TE GRLP H+M E Q I S CT*HTC+TSC EFATHQ *+C
Sbjct: 294 GHHLPWTHYPRCPAPCKTEPGRLPNVHNMLEAQLIQSGCT*HTCSTSCLLEFATHQQ*TC 473
Query: 646 SHPTEHGNGQGGLFPECQHGCTGRNQTQLDGRSSSPPQCQAVCSRFYRQHDYHC 485
SHP N Q GLFPECQ G T RNQT+ DG+S + QCQAVC RFY+Q+ HC
Sbjct: 474 SHPIVRDNEQDGLFPECQRGYTSRNQTRSDGKSLNQQQCQAVCXRFYQQYVDHC 635
Score = 144 bits (308), Expect(3) = 4e-044
Identities = 69/113 (61%), Positives = 76/113 (67%)
Frame = +2 / -1
Query: 485 TMIIVLSIKAGTYCLALWWTRRSAIQLSLISTCAAMLAFREQAALPITMFCGMRTTLRLM 664
TMI VL I+A TYCLAL +R AI+ SLISTC A LAFREQA L I + GMRT+ LM
Sbjct: 635 TMINVLLIEAXTYCLALLLIQRFAIRPSLISTCVATLAFREQAVLLIITYYGMRTSSLLM 456
Query: 665 GCKLSPTTCVTRMLGAHAQYRLFLLHTMLTWQPSELGSTWSQIRVTVDLWQAV 823
CKL TTC TRMLGA A Y+L L H M WQPS LG TWS+ V WQ V
Sbjct: 455 SCKL*QTTCATRMLGAPALYQLCLQHIMHIWQPSGLGFTWSRTPRIVGPWQVV 297
Score = 142 bits (304), Expect(2) = 6e-037
Identities = 66/109 (60%), Positives = 82/109 (75%)
Frame = -3 / +1
Query: 822 TACHRSTVTRIWLHVEPSSEGCQVSIVCRRNNRY*ACAPSIRVTQVVGESLQPISRKVVL 643
T CH T+ + LHV+PS EGCQ+ I+C R+N Y A APSIRV QVV SLQ IS ++VL
Sbjct: 298 TTCHGPTIRGVRLHVKPSPEGCQMCIICWRHN*YRAGAPSIRVAQVVC*SLQLISSELVL 477
Query: 642 IPQNMVMGRAACSLNASMAAQVEIKLSWMADLRVHHSARQYVPAFIDST 496
IP ++M R ACSLNAS+A QVEIKL MA+L +++SARQYV A I+ST
Sbjct: 478 IP*YVIMSRTACSLNASVATQVEIKLGRMANL*INNSARQYVSASINST 624
Score = 108 bits (230), Expect(4) = 6e-033
Identities = 50/76 (65%), Positives = 59/76 (77%)
Frame = +3 / -2
Query: 486 Q**SCCR*KREHTAWHCGGLEDLPSN*V*FLPVQPCWHSGNKPPCPLPCSVG*EQLYG*W 665
Q* + C *KR HTAWHC +DLPS+ V*FL V P WHSGNKP C L ++G*EQ++ *
Sbjct: 634 Q*STYC**KRXHTAWHCC*FKDLPSDRV*FLLV*PRWHSGNKPSCSLSRTMG*EQVHC** 455
Query: 666 VANSHQQLVLHVC*VH 713
VANS++QLVLHVC*VH
Sbjct: 454 VANSNKQLVLHVC*VH 407
Score = 42.3 bits (86), Expect(3) = 4e-051
Identities = 17/29 (58%), Positives = 21/29 (72%)
Frame = -3 / +1
Query: 951 ALTASVLAVEHDPLHVFLEGR*WPHSNIP 865
A+T + L V+HD LHVFL+G P SNIP
Sbjct: 169 AVTTATLTVKHDTLHVFLQGGEGPDSNIP 255
Score = 41.8 bits (85), Expect(3) = 4e-044
Identities = 14/20 (70%), Positives = 16/20 (80%)
Frame = +3 / -2
Query: 864 WECCCEAITCPQGKREAGHV 923
WECCC+A P+GKREA HV
Sbjct: 256 WECCCQAPPRPEGKREACHV 197
Score = 34.1 bits (68), Expect(4) = 6e-033
Identities = 14/24 (58%), Positives = 17/24 (70%)
Frame = +3 / -2
Query: 756 GSLPSSVLHGARYE*QWIYGKPWP 827
GSLP SVLHGA + W++GK P
Sbjct: 364 GSLPGSVLHGAGHLG*WVHGKWCP 293
Score = 32.7 bits (65), Expect(2) = 6e-037
Identities = 16/24 (66%), Positives = 19/24 (79%)
Frame = -2 / +3
Query: 934 LSSRT*PASRFP*GQVMASQQHSQ 863
L+S+T* ASRFP G+ A QQHSQ
Sbjct: 186 LNSKT*HASRFPSGRGGA*QQHSQ 257
Score = 32.2 bits (64), Expect(4) = 6e-033
Identities = 18/30 (60%), Positives = 18/30 (60%)
Frame = +2 / -1
Query: 863 LGMLL*GHYLPSRKT*SGSCSTAKTDAVKA 952
LGMLL G P RKT*S SC T K V A
Sbjct: 257 LGMLLSGPSPP*RKT*SVSCFTVKVAVVTA 168
Score = 31.3 bits (62), Expect(3) = 4e-044
Identities = 12/22 (54%), Positives = 15/22 (68%)
Frame = +1 / -3
Query: 796 SDSGSMASRGPPPGGRNTKAAG 861
S S + +RGPP GGRN +A G
Sbjct: 318 SGSMASGARGPPQGGRNNRAFG 253
Score = 29.9 bits (59), Expect(3) = 4e-051
Identities = 13/22 (59%), Positives = 14/22 (63%)
Frame = -1 / +2
Query: 884 GLTATFPTPAALVLRPPGGGPR 819
G T P AL+LRPP GGPR
Sbjct: 230 GRGLTATFPNALLLRPPCGGPR 295
Score = 22.1 bits (42), Expect(4) = 6e-033
Identities = 8/12 (66%), Positives = 8/12 (66%)
Frame = +3 / -2
Query: 819 PWPSTRGAQHQG 854
PWPST Q QG
Sbjct: 295 PWPSTGWTQ*QG 260
>gb|BJ473415.1|BJ473415 BJ473415 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal12f16 3', mRNA sequence
Length = 588
Score = 263 bits (569), Expect(2) = 1e-084
Identities = 104/110 (94%), Positives = 106/110 (96%)
Frame = +1 / -3
Query: 490 DNRAVDKSGNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENNFTADGL 669
D R VD+SGNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDEN FTAD L
Sbjct: 586 DQRTVDRSGNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENKFTADEL 407
Query: 670 QTLTNNLCYTYARCTRSVSIVPPAYYAHLAAFRARFYMEPDTSDSGSMAS 819
QTLTNNLCYTYARCTRSVSIVPPAYYAHLAAFRARFYMEPDTSDSGS+AS
Sbjct: 406 QTLTNNLCYTYARCTRSVSIVPPAYYAHLAAFRARFYMEPDTSDSGSVAS 257
Score = 180 bits (387), Expect(2) = 8e-056
Identities = 81/102 (79%), Positives = 83/102 (81%)
Frame = -1 / +3
Query: 818 LAIDPLSLVSGSM*NXXXXXXXXXXXAGGTIDTERVHLAYV*HKLLVRVCNPSAVKLFSS 639
LA DPLS VSGSM*N AGGTIDTERVH AYV*H+L VRVCN SAV LFSS
Sbjct: 258 LATDPLSEVSGSM*NRARKAARWA*YAGGTIDTERVHRAYV*HRLFVRVCNSSAVNLFSS 437
Query: 638 HRTW*WAGRLVP*MPAWLHR*KSNSVGWQIFESTTVPGSMFP 513
RT *WAGRLVP*MPAWLH+*KSNSVGWQIFESTTVPGSMFP
Sbjct: 438 QRT**WAGRLVP*MPAWLHK*KSNSVGWQIFESTTVPGSMFP 563
Score = 175 bits (377), Expect(2) = 1e-051
Identities = 73/112 (65%), Positives = 79/112 (70%)
Frame = -2 / +1
Query: 823 HGLP*IHCHSYLAPCRTELGRLPGEHSMQEEQSILSVCT*HTCNTSCW*EFATHQP*SCS 644
H P C APCRTE GRLP HSMQEEQSI S C HTC+T C *EFATHQ * CS
Sbjct: 253 HRSPRTRCRRCPAPCRTEPGRLPDGHSMQEEQSIQSGCIEHTCSTGCL*EFATHQQ*ICS 432
Query: 643 HPTEHGNGQGGLFPECQHGCTGRNQTQLDGRSSSPPQCQAVCSRFYRQHDYH 488
P EH +GQ GLFPECQHG T RN+ DGRSS+ +CQAVCSRFYRQ+ H
Sbjct: 433 RPREHDSGQAGLFPECQHGYTSRNRILSDGRSSNQQRCQAVCSRFYRQYADH 588
Score = 170 bits (366), Expect(2) = 6e-049
Identities = 77/112 (68%), Positives = 82/112 (73%)
Frame = +2 / -1
Query: 488 MIIVLSIKAGTYCLALWWTRRSAIQLSLISTCAAMLAFREQAALPITMFCGMRTTLRLMG 667
MI VLSI+AGTYCLA RRSAI+ + ISTC AMLAFREQA LP MF G RT L LM
Sbjct: 588 MISVLSIEAGTYCLAPLLIRRSAIRQNSISTCVAMLAFREQAGLPTIMFSGTRTNLLLMS 409
Query: 668 CKLSPTTCVTRMLGAHAQYRLFLLHTMLTWQPSELGSTWSQIRVTVDLWQAV 823
CKLS TTC TRML A A YRLFLLHTM WQPS LGSTWS+ T W+AV
Sbjct: 408 CKLSQTTCATRMLDAPALYRLFLLHTMPIWQPSGLGSTWSRTPPTAGPWRAV 253
Score = 166 bits (358), Expect(2) = 1e-043
Identities = 75/109 (68%), Positives = 85/109 (77%)
Frame = -3 / +2
Query: 822 TACHRSTVTRIWLHVEPSSEGCQVSIVCRRNNRY*ACAPSIRVTQVVGESLQPISRKVVL 643
TA H V + LHVEPS EGCQ+ IVCRRNNRY A A SIRV QVV ESLQ IS K VL
Sbjct: 254 TARHGPAVGGVRLHVEPSPEGCQMGIVCRRNNRYRAGASSIRVAQVVCESLQLISSKFVL 433
Query: 642 IPQNMVMGRAACSLNASMAAQVEIKLSWMADLRVHHSARQYVPAFIDST 496
+P+NM++GR ACSLNASMA QVEI+ MADLR+++ ARQYVPA IDST
Sbjct: 434 VPENMIVGRPACSLNASMATQVEIEFCRMADLRINNGARQYVPASIDST 580
Score = 121 bits (258), Expect(3) = 4e-034
Identities = 50/71 (70%), Positives = 56/71 (78%)
Frame = +3 / -2
Query: 501 CR*KREHTAWHCGGLEDLPSN*V*FLPVQPCWHSGNKPPCPLPCSVG*EQLYG*WVANSH 680
CR*KREHTAWH EDLPS+ + FL V PCWHSGNKP CPL CS+G EQ+Y * VANSH
Sbjct: 575 CR*KREHTAWHRC*FEDLPSDRIRFLLV*PCWHSGNKPACPLSCSLGREQIYC**VANSH 396
Query: 681 QQLVLHVC*VH 713
+Q VLHVC +H
Sbjct: 395 KQPVLHVCSMH 363
Score = 70.7 bits (148), Expect(2) = 1e-084
Identities = 31/47 (65%), Positives = 34/47 (72%)
Frame = +1 / -3
Query: 796 SDSGSMASRGPPPGGRNTKAAGVGNVAVRPLPALKENVKRVMFYC*D 936
S S + +RG PP G + GNVAVRPLPALKENVKRVMFYC*D
Sbjct: 274 SGSVASGARGGPPQGGPRSSTRFGNVAVRPLPALKENVKRVMFYC*D 134
Score = 57.9 bits (120), Expect(2) = 8e-056
Identities = 28/39 (71%), Positives = 28/39 (71%)
Frame = -1 / +3
Query: 935 S*Q*NMTRFTFSLRAGNGLTATFPTPAALVLRPPGGGPR 819
S*Q*NMTR TFSLRAG GLTATFP L P GG PR
Sbjct: 135 S*Q*NMTRLTFSLRAGRGLTATFPNLVLLRGPPCGGPPR 251
Score = 48.3 bits (99), Expect(2) = 1e-051
Identities = 22/47 (46%), Positives = 27/47 (57%)
Frame = -3 / +2
Query: 948 LTASVLAVEHDPLHVFLEGR*WPHSNIPNTGSLGVAPPWWRATACHR 808
+TA +LAV+HD L VFLEG P SN+P G+ W AT R
Sbjct: 122 VTARILAVKHDALDVFLEGGERPDSNVPKPGAAAWTALWRTATCTAR 262
Score = 44.6 bits (91), Expect(2) = 6e-049
Identities = 17/34 (50%), Positives = 21/34 (61%)
Frame = +3 / -2
Query: 822 WPSTRGAQHQGCRCWECCCEAITCPQGKREAGHV 923
W S+ G Q + WE CC+A PQGKR+A HV
Sbjct: 248 WRSSTGRSTQQHQVWERCCQASPRPQGKRQARHV 147
Score = 34.5 bits (69), Expect(3) = 4e-034
Identities = 19/30 (63%), Positives = 19/30 (63%)
Frame = +2 / -1
Query: 857 PVLGMLL*GHYLPSRKT*SGSCSTAKTDAV 946
P LG LL G PSRKT S SC TAK AV
Sbjct: 213 PGLGTLLSGLSPPSRKTSSASCFTAKILAV 124
Score = 30.4 bits (60), Expect(2) = 1e-043
Identities = 17/28 (60%), Positives = 19/28 (67%)
Frame = -2 / +1
Query: 946 NSISLSSRT*PASRFP*GQVMASQQHSQ 863
N LSS+T* A RFP*G+ A QQ SQ
Sbjct: 124 NCEDLSSKT*RA*RFP*GRGEA*QQRSQ 207
Score = 27.6 bits (54), Expect(3) = 4e-034
Identities = 12/21 (57%), Positives = 15/21 (71%)
Frame = +3 / -2
Query: 756 GSLPSSVLHGARYE*QWIYGK 818
GSLP SVLHGA + Q + G+
Sbjct: 320 GSLPGSVLHGAGHLRQRVRGE 258
>gb|BU971142.1|BU971142 HB16L19r BC Hordeum vulgare subsp. vulgare cDNA clone HB16L19
5-PRIME, mRNA sequence
Length = 470
Score = 169 bits (363), Expect(2) = 9e-081
Identities = 64/73 (87%), Positives = 67/73 (91%)
Frame = +1 / +1
Query: 496 RAVDKSGNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENNFTADGLQT 675
+ DKSGNILPGTVVD+ ICHPTEFDFYLCSHAGIQGTSRP HYHVL+DEN FTADGLQ
Sbjct: 250 KETDKSGNILPGTVVDTNICHPTEFDFYLCSHAGIQGTSRPTHYHVLFDENGFTADGLQQ 429
Query: 676 LTNNLCYTYARCT 714
LTNNLCYTYARCT
Sbjct: 430 LTNNLCYTYARCT 468
Score = 152 bits (326), Expect(2) = 9e-081
Identities = 61/78 (78%), Positives = 69/78 (88%)
Frame = +1 / +1
Query: 253 GGMIRELLISFWRATGQKPKRIIFYRDGVSEGQFYQVLLYELDAIRKACASLESDYQPPV 432
GGM+RELL+SF++ TG KP RIIFYRDGVSEGQF QVL+YE+DAIRKACASL++DYQP V
Sbjct: 13 GGMMRELLVSFYKKTGYKPSRIIFYRDGVSEGQFAQVLMYEMDAIRKACASLQADYQPKV 192
Query: 433 TFVVVQXRHHTRLFANNH 486
TFVVVQ RHHTRLF H
Sbjct: 193 TFVVVQKRHHTRLFPEVH 246
Score = 122 bits (261), Expect(2) = 6e-047
Identities = 52/68 (76%), Positives = 56/68 (82%)
Frame = -1 / -1
Query: 716 RVHLAYV*HKLLVRVCNPSAVKLFSSHRTW*WAGRLVP*MPAWLHR*KSNSVGWQIFEST 537
RVH AYV*H+LLV C+PSAVK FSS RTW* G LVP*+PAWLHR*KSNSVGW + ST
Sbjct: 470 RVHRAYV*HRLLVSCCSPSAVKPFSSKRTW**VGLLVP*IPAWLHR*KSNSVGWHMLVST 291
Query: 536 TVPGSMFP 513
TVPG MFP
Sbjct: 290 TVPGRMFP 267
Score = 85.8 bits (181), Expect(2) = 6e-047
Identities = 39/57 (68%), Positives = 42/57 (73%)
Frame = -1 / -1
Query: 416 SDSNDAQAFLMASSSYNRTW*NCPSLTPSL*NMILFGFCPVALQKDMRSSLIMPPET 246
S DAQAFLMAS SY RTW NCPSLTPSL*NMIL G PV L D +SLI+PP +
Sbjct: 176 SACKDAQAFLMASISYIRTWANCPSLTPSL*NMILLGL*PVFL*NDTNNSLIIPPSS 6
Score = 77.6 bits (163), Expect(2) = 4e-030
Identities = 35/69 (50%), Positives = 47/69 (68%)
Frame = -3 / -3
Query: 711 APSIRVTQVVGESLQPISRKVVLIPQNMVMGRAACSLNASMAAQVEIKLSWMADLRVHHS 532
A S+ V QVVGE LQPI + V I ++MV+ +AC+LN MA QVEIKL MA + V+H
Sbjct: 465 ASSVCVAQVVGELLQPIGSETVFIEEDMVVSWSACALNTGMATQVEIKLGGMAYVGVNHG 286
Query: 531 ARQYVPAFI 505
+R+ V F+
Sbjct: 285 SRKDVSTFV 259
Score = 74.4 bits (156), Expect(2) = 4e-030
Identities = 34/74 (45%), Positives = 48/74 (64%)
Frame = -3 / -3
Query: 474 KQPGVMTLLDHDKSNWRLVVRLQ*RTGLSNGIKFIQQNLVELSLTDAIPVEYDPLWFLSS 295
++P VM LD++K ++ L++RLQ T L +GI FI QNL EL +PVEYDP F++S
Sbjct: 234 EEPCVMPFLDNNKCHFGLIIRLQRCTSLPDGIHFIHQNLGELPFAHTVPVEYDPAGFITS 55
Query: 294 CPPERYEKLPDHAT 253
E + LP H+T
Sbjct: 54 LLIE*H**LPHHST 13
Score = 68.9 bits (144), Expect(2) = 8e-025
Identities = 30/69 (43%), Positives = 46/69 (66%)
Frame = +3 / +3
Query: 510 KREHTAWHCGGLEDLPSN*V*FLPVQPCWHSGNKPPCPLPCSVG*EQLYG*WVANSHQQL 689
K +H +W+ G + +PS+ V*FLPV PC +SG+K LPC + *++ + W A +HQQ
Sbjct: 264 KWKHPSWNRG*HQHMPSHRV*FLPV*PCRYSGHKQTNSLPCPLR*KRFHCRWAAAAHQQP 443
Query: 690 VLHVC*VHT 716
VLH+ +H+
Sbjct: 444 VLHIRSMHS 470
Score = 65.2 bits (136), Expect(2) = 8e-025
Identities = 29/73 (39%), Positives = 42/73 (57%)
Frame = +3 / +3
Query: 255 WHDQGASHIFLEGNWTETKEDHILQGWRQ*GTILPSSVV*T*CH*KGLCVIGV*LPASSY 434
W+D+G + L +W T++DHILQG + + PSS V* CH +GLC+ L A S
Sbjct: 15 WNDEGVISVIL*EDWL*TQQDHILQGRCERRAVRPSSDV*NGCHQEGLCIFAGGLSAQSD 194
Query: 435 FCRGPXASSHQVV 473
C P +SH+ +
Sbjct: 195 ICCCPEKASHKAL 233
>gb|BJ451080.1|BJ451080 BJ451080 K. Sato unpublished cDNA library, cv. Akashinriki
vegetative stage leaves Hordeum vulgare subsp. vulgare
cDNA clone baak32j21 5', mRNA sequence
Length = 576
Score = 259 bits (561), Expect(3) = 3e-076
Identities = 106/132 (80%), Positives = 111/132 (84%)
Frame = +1 / +1
Query: 424 PPVTFVVVQXRHHTRLFANNHNDNRAVDKSGNILPGTVVDSKICHPTEFDFYLCSHAGIQ 603
P VV + H N+++ KSGNILPGTVVDSKICHPTEFDFYLCSHAGIQ
Sbjct: 103 PVTFVVVQKRHHTRLFANNHNDQRSVDRKSGNILPGTVVDSKICHPTEFDFYLCSHAGIQ 282
Query: 604 GTSRPAHYHVLWDENNFTADGLQTLTNNLCYTYARCTRSVSIVPPAYYAHLAAFRARFYM 783
GTSRPAHYHVLWDENNFTADGLQTLTNNLCYTYARCTRSVSIVPPAYYAHLAAFRARFYM
Sbjct: 283 GTSRPAHYHVLWDENNFTADGLQTLTNNLCYTYARCTRSVSIVPPAYYAHLAAFRARFYM 462
Query: 784 EPDTSDSGSMAS 819
E DTSD GS+AS
Sbjct: 463 ELDTSDGGSVAS 498
Score = 166 bits (358), Expect(3) = 1e-052
Identities = 77/102 (75%), Positives = 80/102 (78%)
Frame = -1 / -2
Query: 818 LAIDPLSLVSGSM*NXXXXXXXXXXXAGGTIDTERVHLAYV*HKLLVRVCNPSAVKLFSS 639
LA +P S VS SM*N AGGTIDTERVHLA V*H+L VRVC PSAVKLFSS
Sbjct: 497 LATEPPSEVSSSM*NRARKAAR*A*YAGGTIDTERVHLA*V*HRLFVRVCKPSAVKLFSS 318
Query: 638 HRTW*WAGRLVP*MPAWLHR*KSNSVGWQIFESTTVPGSMFP 513
RTW* AGRLVP*+PAWL R*KSNSVGW IFESTTVPGSMFP
Sbjct: 317 QRTW*CAGRLVP*IPAWLQR*KSNSVGWHIFESTTVPGSMFP 192
Score = 137 bits (293), Expect(2) = 7e-042
Identities = 59/103 (57%), Positives = 67/103 (65%)
Frame = -2 / -3
Query: 805 HCHSYLAPCRTELGRLPGEHSMQEEQSILSVCT*HTCNTSCW*EFATHQP*SCSHPTEHG 626
H Y PCRTEL + GEHSM E QSI + CT C+T C *E A H *+CSHP HG
Sbjct: 484 HRRRYPVPCRTELEKPRGEHSMPEAQSIQNGCTLRRCSTGCS*ESANHPR*NCSHPKGHG 305
Query: 625 NGQGGLFPECQHGCTGRNQTQLDGRSSSPPQCQAVCSRFYRQH 497
N QGGLFPE QHG GRN+TQ DG S + + QAVC F+ QH
Sbjct: 304 NAQGGLFPEYQHGYKGRNRTQ*DGISLNQRRYQAVCFHFFYQH 176
Score = 134 bits (288), Expect(2) = 8e-039
Identities = 65/111 (58%), Positives = 78/111 (70%)
Frame = -3 / -1
Query: 828 RATACHRSTVTRIWLHVEPSSEGCQVSIVCRRNNRY*ACAPSIRVTQVVGESLQPISRKV 649
R T R+TV I HVEPSS+ +VSIVCRR+NRY AP + V QVV ESLQ I K+
Sbjct: 507 RGTTRDRATVGGIQFHVEPSSKSREVSIVCRRHNRYRTGAPCVGVAQVVRESLQTIRGKI 328
Query: 648 VLIPQNMVMGRAACSLNASMAAQVEIKLSWMADLRVHHSARQYVPAFIDST 496
VLIP++MVM RAACSLN SMA +VEI+LS MA L ++ RQYV F +T
Sbjct: 327 VLIPKDMVMRRAACSLNTSMATKVEIELSRMAYL*INDGTRQYVSTFSINT 175
Score = 132 bits (282), Expect(3) = 5e-062
Identities = 53/59 (89%), Positives = 56/59 (94%)
Frame = +1 / +1
Query: 334 GVSEGQFYQVLLYELDAIRKACASLESDYQPPVTFVVVQXRHHTRLFANNHNDNRAVDK 510
GVSEGQFYQVLLYELDAIRKACASLE +YQPPVTFVVVQ RHHTRLFANNHND R+VD+
Sbjct: 10 GVSEGQFYQVLLYELDAIRKACASLEPNYQPPVTFVVVQKRHHTRLFANNHNDQRSVDR 186
Score = 118 bits (253), Expect(3) = 5e-062
Identities = 50/100 (50%), Positives = 62/100 (62%)
Frame = +3 / +3
Query: 510 KREHTAWHCGGLEDLPSN*V*FLPVQPCWHSGNKPPCPLPCSVG*EQLYG*WVANSHQQL 689
K +HTAW+ +D+PS *V FLP+ PCW+SGNKPPC LPC +G*EQ Y W A+SH+Q
Sbjct: 189 KWKHTAWYRR*FKDMPSY*VRFLPL*PCWYSGNKPPCALPCPLG*EQFYRGWFADSHEQP 368
Query: 690 VLHVC*VHTXXXXXXXXXXXXPGSLPSSVLHGARYE*QWI 809
VLH+ VH P SSVLHG Y +W+
Sbjct: 369 VLHLRKVHPFCIDCASGILCSPRGFSSSVLHGTGYLRRWL 488
Score = 116 bits (247), Expect(2) = 3e-034
Identities = 62/107 (57%), Positives = 67/107 (62%)
Frame = +2 / +2
Query: 485 TMIIVLSIKAGTYCLALWWTRRSAIQLSLISTCAAMLAFREQAALPITMFCGMRTTLRLM 664
T+ VL K TYCL +R AI LS IST AML FREQAAL ITM GMRT L M
Sbjct: 164 TISEVLIEKVETYCLVPSLIQRYAILLSSISTFVAMLVFREQAALRITMSFGMRTILPRM 343
Query: 665 GCKLSPTTCVTRMLGAHAQYRLFLLHTMLTWQPSELGSTWSQIRVTV 805
C+LS TTC T GA YRL L HTMLT + ELGSTW+ I TV
Sbjct: 344 VCRLSRTTCATPTQGAPVLYRLCLRHTMLTSRLFELGSTWNWIPPTV 484
Score = 57.0 bits (118), Expect(3) = 1e-052
Identities = 27/60 (45%), Positives = 36/60 (60%)
Frame = -3 / -1
Query: 507 IDSTXXXXXISKQPGVMTLLDHDKSNWRLVVRLQ*RTGLSNGIKFIQQNLVELSLTDAIP 328
I+++ + K P +M LDH K N L++ LQ GLSN IK IQQNL+ELS + P
Sbjct: 183 INTSLIVVVVGK*PCMMAFLDHHKCNGWLIIGLQGCAGLSNRIKLIQQNLIELSFANTXP 4
Score = 54.2 bits (112), Expect(2) = 7e-042
Identities = 23/26 (88%), Positives = 24/26 (92%)
Frame = -1 / -2
Query: 410 SNDAQAFLMASSSYNRTW*NCPSLTP 333
S DAQAFL+ASSSYNRT *NCPSLTP
Sbjct: 86 SKDAQAFLIASSSYNRT**NCPSLTP 9
Score = 49.6 bits (102), Expect(2) = 3e-034
Identities = 21/43 (48%), Positives = 27/43 (62%)
Frame = +3 / +3
Query: 348 TILPSSVV*T*CH*KGLCVIGV*LPASSYFCRGPXASSHQVVC 476
T+L SVV* *C *KGL ++G L A+ Y C GP S+ +C
Sbjct: 24 TVLSGSVV*A*CD*KGLRILGAQLSATRYICGGPETPSYTAIC 152
Score = 46.4 bits (95), Expect(2) = 8e-039
Identities = 25/60 (41%), Positives = 27/60 (45%)
Frame = -2 / -3
Query: 511 FYRQHDYHCDY*QTTWCDDAXGPRQK*LEAGSQTPMTHRPF*WHQVHTTELGRIVPH*RH 332
FY+ C Q D GP Q * A + P RPF* HQ HTTE R V * H
Sbjct: 187 FYQHFADRCGCWQIAVYDGVSGPPQM*RVADNWAPRMRRPF*SHQAHTTEPDRTVLR*HH 8
Score = 40.0 bits (81), Expect(3) = 3e-076
Identities = 14/23 (60%), Positives = 18/23 (78%)
Frame = +2 / +2
Query: 329 GMASVRDNSTKFCCMNLMPLERP 397
GM +D+S +FCCM+LM LERP
Sbjct: 5 GMVLAKDSSIRFCCMSLMRLERP 73
Score = 26.7 bits (52), Expect(3) = 5e-062
Identities = 13/33 (39%), Positives = 16/33 (48%)
Frame = +1 / +1
Query: 790 DTSDSGSMASRGPPPGGRNTKAAGVGNVAVRPL 888
D S A+ G P G + GNVAV+PL
Sbjct: 478 DGGSVASGATTGRGPTGARGGSRAAGNVAVKPL 576
Score = 25.4 bits (49), Expect(3) = 3e-076
Identities = 7/20 (35%), Positives = 11/20 (55%)
Frame = +3 / +3
Query: 801 QWIYGKPWPSTRGAQHQGCR 860
+W + +PWP R + CR
Sbjct: 495 EWCHDRPWPYWRTRRQ*SCR 554
Score = 22.1 bits (42), Expect(3) = 1e-052
Identities = 11/24 (45%), Positives = 12/24 (50%)
Frame = -1 / -2
Query: 884 GLTATFPTPAALVLRPPGGGPRLA 813
GLTATFP P G P +A
Sbjct: 572 GLTATFPAALLPPRAPVGPRPVVA 501
>gb|BU975928.1|BU975928 HB32L19r BC Hordeum vulgare subsp. vulgare cDNA clone HB32L19
5-PRIME, mRNA sequence
Length = 456
Score = 281 bits (607), Expect = 7e-075
Identities = 116/132 (87%), Positives = 124/132 (93%)
Frame = +1 / +2
Query: 40 VSDIATIIFGADVTHPHPGEDSSPSIAAVVAFQDWPEVTKYAGLVSAQAHRXXXIQDLFK 219
V+D TIIFGADVTHPHPGEDSSPSIAAVVA QDWPE+TKYAGLVSAQAHR IQDLFK
Sbjct: 59 VTDRPTIIFGADVTHPHPGEDSSPSIAAVVASQDWPEITKYAGLVSAQAHRQELIQDLFK 238
Query: 220 VWQDPERGTVSGGMIRELLISFWRATGQKPKRIIFYRDGVSEGQFYQVLLYELDAIRKAC 399
VWQDP+RGTV+GGMI+ELLISF RATGQKP+RIIFYRDGVSEGQFYQVLL+ELDAIRKAC
Sbjct: 239 VWQDPQRGTVTGGMIKELLISFKRATGQKPQRIIFYRDGVSEGQFYQVLLFELDAIRKAC 418
Query: 400 ASLESDYQPPVT 435
ASLE +YQPPVT
Sbjct: 419 ASLEPNYQPPVT 454
Score = 230 bits (496), Expect = 1e-059
Identities = 103/124 (83%), Positives = 106/124 (85%)
Frame = -1 / -1
Query: 410 SNDAQAFLMASSSYNRTW*NCPSLTPSL*NMILFGFCPVALQKDMRSSLIMPPETVPLSG 231
S DAQAFLMASSS NRTW*NCPSLTPSL*NMIL GFCPVAL KDMRSSLIMPP TVPL G
Sbjct: 429 SKDAQAFLMASSSNNRTW*NCPSLTPSL*NMIL*GFCPVALLKDMRSSLIMPPVTVPLWG 250
Query: 230 SCHTLKRSCIXXXRWA*ALTNPAYFVTSGQS*KATTAAMEGLESSPGWGWVTSAPKIIVA 51
SCHTLKRSCI WA ALTNPAY V SGQS*+ATTAAMEGLESSPG G VTSAP I+V
Sbjct: 249 SCHTLKRSCISSCLWAWALTNPAYLVISGQS*EATTAAMEGLESSPG*GCVTSAPNIMVG 70
Query: 50 MSLT 39
S+T
Sbjct: 69 RSVT 58
Score = 193 bits (416), Expect = 1e-048
Identities = 86/132 (65%), Positives = 96/132 (72%)
Frame = -3 / -3
Query: 435 SNWRLVVRLQ*RTGLSNGIKFIQQNLVELSLTDAIPVEYDPLWFLSSCPPERYEKLPDHA 256
SNWRL++ LQ TGL NGIKF QQNLVELSL D IPV+YD L FL SCP ERYEKL DHA
Sbjct: 454 SNWRLIIWLQGCTGLPNGIKFKQQNLVELSLADTIPVKYDSLRFLPSCPLERYEKLLDHA 275
Query: 255 TRDSPPFGILPYLEKILYXXXXMGLSTHQSCILCNLRPVLKSNHSCNGRTRIFPRMGMGH 76
S GILPY +KILY MGL TH SC+L LRPVL+SNHSCNGR IF R+ M +
Sbjct: 274 ASHSSSLGILPYFKKILYQLLPMGLGTH*SCVLSYLRPVLRSNHSCNGRAGIFSRVRMCN 95
Query: 75 ISTKDNSRYVTD 40
ISTK R V++
Sbjct: 94 ISTKYYGRSVSN 59
Score = 179 bits (386), Expect = 2e-044
Identities = 80/133 (60%), Positives = 89/133 (66%)
Frame = +3 / +1
Query: 39 CQ*HSDYYLWC*CDPSPSWGRXXXXXXXXXXXXRLA*GYKVCRIGECSSPSXXXDTGSFQ 218
C * +D+ +WC*C S W R RLA* V RI EC SP DTGSF
Sbjct: 58 CY*PTDHNIWC*CYTSSPWRRFQPFHCSCGCFSRLA*DN*VRRISECPSP*ARADTGSF* 237
Query: 219 GMARSRKGDCLWWHDQGASHIFLEGNWTETKEDHILQGWRQ*GTILPSSVV*T*CH*KGL 398
MARS K +C W HDQGASHIF EGNW ET E+HILQGW Q GT+LPSSVV*T*CH*+GL
Sbjct: 238 SMARSPKRNCDWRHDQGASHIFQEGNWAETSENHILQGWCQRGTVLPSSVV*T*CH*EGL 417
Query: 399 CVIGV*LPASSYF 437
C++G L ASSYF
Sbjct: 418 CILGAKLSASSYF 456
Score = 171 bits (369), Expect = 5e-042
Identities = 85/124 (68%), Positives = 87/124 (70%)
Frame = -2 / -2
Query: 436 K*LEAGSQTPMTHRPF*WHQVHTTELGRIVPH*RHPCRI*SSLVSVQLPSRKI*EAP*SC 257
K*LEA + P HRP *WHQV TTELGR VP * HPC+I* S VS QLPS KI*EAP*SC
Sbjct: 455 K*LEADNLAPRMHRPS*WHQVQTTELGRTVPR*HHPCKI*FSEVSAQLPS*KI*EAP*SC 276
Query: 256 HQRQSPFRDLAIP*KDPVSXXXDGLEHSPILHTL*PQASLEKQPQLQWKD*NLPQDGDGS 77
Q Q F DLAI *KDPVS GL HS IL T QASLEKQPQLQWK NL Q D
Sbjct: 275 RQSQFLFGDLAIL*KDPVSALAYGLGHSLILRT*LSQASLEKQPQLQWKGWNLLQGEDV* 96
Query: 76 HQHQ 65
HQHQ
Sbjct: 95 HQHQ 84
Score = 155 bits (334), Expect = 3e-037
Identities = 74/103 (71%), Positives = 77/103 (74%)
Frame = +2 / +3
Query: 92 LGKILVLPLQLWLLFKTGLRLQSMQDW*VLKPIXXX*YRIFSRYGKIPKGGLSLVA*SGS 271
L KI LPLQLWLL KTGLR S QD *V KPI *YRIF +YGKIPK L L A*S S
Sbjct: 111 LEKIPALPLQLWLLLKTGLR*LSTQD**VPKPIGKS*YRIFLKYGKIPKEEL*LAA*SRS 290
Query: 272 FSYLSGGQLDRNQRGSYSTGMASVRDNSTKFCCMNLMPLERPV 400
FSYLS GQL RN R SY TGM S RD+STKFCC+NLMPL RPV
Sbjct: 291 FSYLSRGQLGRNLRESYFTGMVSARDSSTKFCCLNLMPLGRPV 419
>gb|CA030641.1|CA030641 HX07K22r HX Hordeum vulgare subsp. vulgare cDNA clone HX07K22
5-PRIME, mRNA sequence
Length = 621
Score = 278 bits (602), Expect = 3e-074
Identities = 117/131 (89%), Positives = 122/131 (93%)
Frame = +1 / +2
Query: 34 PGVSDIATIIFGADVTHPHPGEDSSPSIAAVVAFQDWPEVTKYAGLVSAQAHRXXXIQDL 213
P VSD TIIFGADVTHPHPGEDSSPSIAAVVA QDWPEVTKYAGLVSAQAHR IQDL
Sbjct: 227 PLVSDRPTIIFGADVTHPHPGEDSSPSIAAVVASQDWPEVTKYAGLVSAQAHRQELIQDL 406
Query: 214 FKVWQDPERGTVSGGMIRELLISFWRATGQKPKRIIFYRDGVSEGQFYQVLLYELDAIRK 393
FKVWQDP+RGTV+GGMI+ELLISF RATGQKP+RIIFYRDGVSEGQFYQVLLYELDAIRK
Sbjct: 407 FKVWQDPQRGTVTGGMIKELLISFKRATGQKPQRIIFYRDGVSEGQFYQVLLYELDAIRK 586
Query: 394 ACASLESDYQP 426
ACASLE +YQP
Sbjct: 587 ACASLEPNYQP 619
Score = 223 bits (482), Expect = 1e-057
Identities = 102/126 (80%), Positives = 106/126 (84%)
Frame = -1 / -1
Query: 410 SNDAQAFLMASSSYNRTW*NCPSLTPSL*NMILFGFCPVALQKDMRSSLIMPPETVPLSG 231
S DA AFLMASSSY RT *N PSLTPSL*NMIL+GFCPVAL K+MRSSLIMPP TVPL G
Sbjct: 603 SKDAHAFLMASSSYRRT**NWPSLTPSL*NMILWGFCPVALLKEMRSSLIMPPVTVPLWG 424
Query: 230 SCHTLKRSCIXXXRWA*ALTNPAYFVTSGQS*KATTAAMEGLESSPGWGWVTSAPKIIVA 51
SCHTLKRSCI WA ALTNPAY VTSGQS +ATTAAMEGLESSPG G VTSAP IIV
Sbjct: 423 SCHTLKRSCINSCLWAWALTNPAYLVTSGQSWEATTAAMEGLESSPG*GCVTSAPNIIVG 244
Query: 50 MSLTPG 33
+SLT G
Sbjct: 243 LSLTRG 226
Score = 175 bits (376), Expect = 5e-043
Identities = 82/128 (64%), Positives = 92/128 (71%)
Frame = -3 / -3
Query: 423 LVVRLQ*RTGLSNGIKFIQQNLVELSLTDAIPVEYDPLWFLSSCPPERYEKLPDHATRDS 244
LV+ LQ RT LSNGIKFIQ+NL+EL+L D IPV+YD L FLS CP ER EKL DHAT S
Sbjct: 616 LVIGLQGRTCLSNGIKFIQKNLIELALADTIPVKYDSLGFLSGCPLERNEKLLDHATSHS 437
Query: 243 PPFGILPYLEKILYXXXXMGLSTHQSCILCNLRPVLKSNHSCNGRTRIFPRMGMGHISTK 64
GILPY +KILY MGL + SCIL +LRPVL SNHS NGRT IF RM + +ISTK
Sbjct: 436 SSLGILPYFKKILYQFLPMGLGAN*SCILSDLRPVLGSNHSSNGRTGIFSRMRVCNISTK 257
Query: 63 DNSRYVTD 40
VTD
Sbjct: 256 YYCWSVTD 233
Score = 168 bits (361), Expect = 6e-041
Identities = 84/128 (65%), Positives = 88/128 (68%)
Frame = -2 / -2
Query: 424 AGSQTPMTHRPF*WHQVHTTELGRIVPH*RHPCRI*SSLVSVQLPSRKI*EAP*SCHQRQ 245
AG+ P TH PF*WHQVHT EL R P * HPC+I* S VSV+LPS K *EAP*SCHQ Q
Sbjct: 617 AGNWAPRTHMPF*WHQVHTEELDRTGPR*HHPCKI*FSGVSVRLPS*KK*EAP*SCHQSQ 438
Query: 244 SPFRDLAIP*KDPVSXXXDGLEHSPILHTL*PQASLEKQPQLQWKD*NLPQDGDGSHQHQ 65
F DLAI *KDPVS GL ILHT *PQASL KQPQ QWKD NL QD HQHQ
Sbjct: 437 FLFGDLAIL*KDPVSILAYGLGR*LILHT**PQASLGKQPQQQWKDWNLLQDEGV*HQHQ 258
Query: 64 R**SLCH* 41
+CH*
Sbjct: 257 ILLLVCH* 234
Score = 146 bits (313), Expect(2) = 4e-037
Identities = 65/96 (67%), Positives = 71/96 (73%)
Frame = +3 / +1
Query: 138 RLA*GYKVCRIGECSSPSXXXDTGSFQGMARSRKGDCLWWHDQGASHIFLEGNWTETKED 317
RLA*G+ VCRI SP DTGSF MARS K +C WWHDQGASH F EGN TET E+
Sbjct: 331 RLA*GH*VCRIS*RPSP*ARIDTGSF*SMARSPKRNCDWWHDQGASHFFQEGNRTETPEN 510
Query: 318 HILQGWRQ*GTILPSSVV*T*CH*KGLCVIGV*LPA 425
HILQGW Q G +L SS V*T*CH*KG+CV+G LPA
Sbjct: 511 HILQGWCQRGPVLSSSSV*T*CH*KGMCVLGAQLPA 618
Score = 145 bits (311), Expect = 5e-034
Identities = 73/105 (69%), Positives = 76/105 (72%)
Frame = +2 / +3
Query: 89 ILGKILVLPLQLWLLFKTGLRLQSMQDW*VLKPIXXX*YRIFSRYGKIPKGGLSLVA*SG 268
IL KI VLPL LWLL KTGLR SMQD KPI *YRIF +YGKIPK L LVA*S
Sbjct: 282 ILEKIPVLPLLLWLLPKTGLRSLSMQD*LAPKPIGKN*YRIFLKYGKIPKEEL*LVA*SR 461
Query: 269 SFSYLSGGQLDRNQRGSYSTGMASVRDNSTKFCCMNLMPLERPVR 403
SFS+LS GQ DRN R SY TGM S R +S KF CMNLMPLER VR
Sbjct: 462 SFSFLSRGQPDRNPRESYFTGMVSARASSIKFFCMNLMPLERHVR 596
Score = 29.0 bits (57), Expect(2) = 4e-037
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = +3 / +1
Query: 39 CQ*HSDYYLWC*CDPSPSWGR 101
CQ* ++ +WC*C SW R
Sbjct: 232 CQ*QTNNNIWC*CYTPSSWRR 294
>gb|BJ468650.1|BJ468650 BJ468650 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags39l05 3', mRNA sequence
Length = 673
Score = 221 bits (477), Expect(2) = 5e-072
Identities = 86/89 (96%), Positives = 87/89 (97%)
Frame = +1 / -3
Query: 553 CHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENNFTADGLQTLTNNLCYTYARCTRSVSIV 732
CHPTEFDFYLCSHAGIQGTSRPAHYHVLWDEN FTAD LQTLTNNLCYTYARCTRSVSIV
Sbjct: 671 CHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENKFTADELQTLTNNLCYTYARCTRSVSIV 492
Query: 733 PPAYYAHLAAFRARFYMEPDTSDSGSMAS 819
PPAYYAHLAAFRARFYMEPDTSDSGS+AS
Sbjct: 491 PPAYYAHLAAFRARFYMEPDTSDSGSVAS 405
Score = 149 bits (319), Expect(2) = 2e-046
Identities = 68/89 (76%), Positives = 70/89 (78%)
Frame = -1 / +1
Query: 818 LAIDPLSLVSGSM*NXXXXXXXXXXXAGGTIDTERVHLAYV*HKLLVRVCNPSAVKLFSS 639
LA DPLS VSGSM*N AGGTIDTERVH AYV*H+L VRVCN SAV LFSS
Sbjct: 406 LATDPLSEVSGSM*NRARKAARWA*YAGGTIDTERVHRAYV*HRLFVRVCNSSAVNLFSS 585
Query: 638 HRTW*WAGRLVP*MPAWLHR*KSNSVGWQ 552
RT *WAGRLVP*MPAWLH+*KSNSVGWQ
Sbjct: 586 QRT**WAGRLVP*MPAWLHK*KSNSVGWQ 672
Score = 140 bits (301), Expect(2) = 4e-041
Identities = 59/91 (64%), Positives = 62/91 (68%)
Frame = -2 / +2
Query: 823 HGLP*IHCHSYLAPCRTELGRLPGEHSMQEEQSILSVCT*HTCNTSCW*EFATHQP*SCS 644
H P C APCRTE GRLP HSMQEEQSI S C HTC+T C *EFATHQ * CS
Sbjct: 401 HRSPRTRCRRCPAPCRTEPGRLPDGHSMQEEQSIQSGCIEHTCSTGCL*EFATHQQ*ICS 580
Query: 643 HPTEHGNGQGGLFPECQHGCTGRNQTQLDGR 551
P EH +GQ GLFPECQHG T RN+ DGR
Sbjct: 581 RPREHDSGQAGLFPECQHGYTSRNRILSDGR 673
Score = 140 bits (301), Expect(2) = 4e-040
Identities = 62/91 (68%), Positives = 66/91 (72%)
Frame = +2 / -1
Query: 551 SAIQLSLISTCAAMLAFREQAALPITMFCGMRTTLRLMGCKLSPTTCVTRMLGAHAQYRL 730
SAI+ + ISTC AMLAFREQA LP MF G RT L LM CKLS TTC TRML A A YRL
Sbjct: 673 SAIRQNSISTCVAMLAFREQAGLPTIMFSGTRTNLLLMSCKLSQTTCATRMLDAPALYRL 494
Query: 731 FLLHTMLTWQPSELGSTWSQIRVTVDLWQAV 823
FLLHTM WQPS LGSTWS+ T W+AV
Sbjct: 493 FLLHTMPIWQPSGLGSTWSRTPPTAGPWRAV 401
Score = 133 bits (285), Expect(2) = 1e-033
Identities = 61/90 (67%), Positives = 68/90 (75%)
Frame = -3 / +3
Query: 822 TACHRSTVTRIWLHVEPSSEGCQVSIVCRRNNRY*ACAPSIRVTQVVGESLQPISRKVVL 643
TA H V + LHVEPS EGCQ+ IVCRRNNRY A A SIRV QVV ESLQ IS K VL
Sbjct: 402 TARHGPAVGGVRLHVEPSPEGCQMGIVCRRNNRYRAGASSIRVAQVVCESLQLISSKFVL 581
Query: 642 IPQNMVMGRAACSLNASMAAQVEIKLSWMA 553
+P+NM++GR ACSLNASMA QVEI+ MA
Sbjct: 582 VPENMIVGRPACSLNASMATQVEIEFCRMA 671
Score = 90.4 bits (191), Expect(3) = 5e-025
Identities = 37/54 (68%), Positives = 43/54 (79%)
Frame = +3 / -2
Query: 552 LPSN*V*FLPVQPCWHSGNKPPCPLPCSVG*EQLYG*WVANSHQQLVLHVC*VH 713
LPS+ + FL V PCWHSGNKP CPL CS+G EQ+Y * VANSH+Q VLHVC +H
Sbjct: 672 LPSDRIRFLLV*PCWHSGNKPACPLSCSLGREQIYC**VANSHKQPVLHVCSMH 511
Score = 70.7 bits (148), Expect(2) = 5e-072
Identities = 31/47 (65%), Positives = 34/47 (72%)
Frame = +1 / -3
Query: 796 SDSGSMASRGPPPGGRNTKAAGVGNVAVRPLPALKENVKRVMFYC*D 936
S S + +RG PP G + GNVAVRPLPALKENVKRVMFYC*D
Sbjct: 422 SGSVASGARGGPPQGGPRSSTRFGNVAVRPLPALKENVKRVMFYC*D 282
Score = 57.9 bits (120), Expect(2) = 2e-046
Identities = 28/39 (71%), Positives = 28/39 (71%)
Frame = -1 / +1
Query: 935 S*Q*NMTRFTFSLRAGNGLTATFPTPAALVLRPPGGGPR 819
S*Q*NMTR TFSLRAG GLTATFP L P GG PR
Sbjct: 283 S*Q*NMTRLTFSLRAGRGLTATFPNLVLLRGPPCGGPPR 399
Score = 48.3 bits (99), Expect(2) = 4e-041
Identities = 22/47 (46%), Positives = 27/47 (57%)
Frame = -3 / +3
Query: 948 LTASVLAVEHDPLHVFLEGR*WPHSNIPNTGSLGVAPPWWRATACHR 808
+TA +LAV+HD L VFLEG P SN+P G+ W AT R
Sbjct: 270 VTARILAVKHDALDVFLEGGERPDSNVPKPGAAAWTALWRTATCTAR 410
Score = 44.6 bits (91), Expect(2) = 4e-040
Identities = 17/34 (50%), Positives = 21/34 (61%)
Frame = +3 / -2
Query: 822 WPSTRGAQHQGCRCWECCCEAITCPQGKREAGHV 923
W S+ G Q + WE CC+A PQGKR+A HV
Sbjct: 396 WRSSTGRSTQQHQVWERCCQASPRPQGKRQARHV 295
Score = 34.5 bits (69), Expect(3) = 5e-025
Identities = 19/30 (63%), Positives = 19/30 (63%)
Frame = +2 / -1
Query: 857 PVLGMLL*GHYLPSRKT*SGSCSTAKTDAV 946
P LG LL G PSRKT S SC TAK AV
Sbjct: 361 PGLGTLLSGLSPPSRKTSSASCFTAKILAV 272
Score = 30.4 bits (60), Expect(2) = 1e-033
Identities = 17/28 (60%), Positives = 19/28 (67%)
Frame = -2 / +2
Query: 946 NSISLSSRT*PASRFP*GQVMASQQHSQ 863
N LSS+T* A RFP*G+ A QQ SQ
Sbjct: 272 NCEDLSSKT*RA*RFP*GRGEA*QQRSQ 355
Score = 27.6 bits (54), Expect(3) = 5e-025
Identities = 12/21 (57%), Positives = 15/21 (71%)
Frame = +3 / -2
Query: 756 GSLPSSVLHGARYE*QWIYGK 818
GSLP SVLHGA + Q + G+
Sbjct: 468 GSLPGSVLHGAGHLRQRVRGE 406
>gb|BU996805.1|BU996805 HM14N04r HM Hordeum vulgare subsp. vulgare cDNA clone HM14N04
5-PRIME, mRNA sequence
Length = 612
Score = 201 bits (433), Expect(2) = 5e-064
Identities = 76/99 (76%), Positives = 87/99 (87%)
Frame = +1 / +2
Query: 487 NDNRAVDKSGNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENNFTADG 666
+D + D SGN++PGTVVD +ICHPTEFDF+LCSHAGI+GTSRPAHYHVL D+NNF+AD
Sbjct: 248 SDGKYQDDSGNVMPGTVVDRQICHPTEFDFFLCSHAGIKGTSRPAHYHVLRDDNNFSADD 427
Query: 667 LQTLTNNLCYTYARCTRSVSIVPPAYYAHLAAFRARFYM 783
LQ+LTNNLCYTYA CTRSVS PPAYYAH AFRARFY+
Sbjct: 428 LQSLTNNLCYTYASCTRSVSTAPPAYYAHKLAFRARFYL 544
Score = 125 bits (267), Expect(2) = 1e-035
Identities = 54/75 (72%), Positives = 58/75 (77%)
Frame = -1 / -1
Query: 737 GGTIDTERVHLAYV*HKLLVRVCNPSAVKLFSSHRTW*WAGRLVP*MPAWLHR*KSNSVG 558
GG +DTERV LAYV*H+L VR C SA+KL SS TW* AGRLVP +PAWL R KSNSVG
Sbjct: 498 GGAVDTERVQLAYV*HRLFVRDCRSSALKLLSSRSTW*CAGRLVPLIPAWLQRKKSNSVG 319
Query: 557 WQIFESTTVPGSMFP 513
WQI STTVPG FP
Sbjct: 318 WQICLSTTVPGITFP 274
Score = 100 bits (213), Expect(2) = 2e-022
Identities = 45/76 (59%), Positives = 48/76 (63%)
Frame = -2 / -2
Query: 751 EHSMQEEQSILSVCT*HTCNTSCW*EFATHQP*SCSHPTEHGNGQGGLFPECQHGCTGRN 572
E S QEEQS S C+ HTC+T C *E A HQ *SC H GN Q GLFP QHG GRN
Sbjct: 512 ERSTQEEQSTRSECSLHTCSTGCL*ETAGHQH*SCCHLAARGNAQDGLFP*SQHGYRGRN 333
Query: 571 QTQLDGRSSSPPQCQA 524
QT L GRS+ P C A
Sbjct: 332 QTLLGGRSAYQPLCLA 285
Score = 83.5 bits (176), Expect(2) = 2e-022
Identities = 43/76 (56%), Positives = 44/76 (57%)
Frame = +2 / +3
Query: 524 CLALWWTRRSAIQLSLISTCAAMLAFREQAALPITMFCGMRTTLRLMGCKLSPTTCVTRM 703
C A W RSA Q SLIS+ AML REQA L IT C M TT LM C L TTC TRM
Sbjct: 285 CQAQWLIGRSATQQSLISSSVAMLGSREQAVLRITTCCEMTTTSVLMTCSLLQTTCATRM 464
Query: 704 LGAHAQYRLFLLHTML 751
A A RL LL T L
Sbjct: 465 QAALAPCRLLLLRTTL 512
Score = 64.3 bits (134), Expect(2) = 5e-064
Identities = 30/68 (44%), Positives = 43/68 (63%)
Frame = +1 / +2
Query: 256 GMIRELLISFWRATGQKPKRIIFYRDGVSEGQFYQVLLYELDAIRKACASLESDYQPPVT 435
G+ ++LL+SF + + KP+++IFYRDGVSEGQF VL E+ I KA +L + P
Sbjct: 29 GIAKKLLLSFEQHSKHKPQQLIFYRDGVSEGQFRMVLENEIPEIEKAWKALYNVKPPITF 208
Query: 436 FVVVQXRH 459
VV + H
Sbjct: 209 IVVQKRHH 232
Score = 45.5 bits (93), Expect(2) = 1e-035
Identities = 22/51 (43%), Positives = 30/51 (58%)
Frame = -1 / -1
Query: 407 NDAQAFLMASSSYNRTW*NCPSLTPSL*NMILFGFCPVALQKDMRSSLIMP 255
N AF ++ S+++T N PSLTPSL*N+ +G C + RS L MP
Sbjct: 180 NAFHAFSISGISFSKTILN*PSLTPSL*NISCWGLCLECCSNERRSFLAMP 28
Score = 42.3 bits (86), Expect(2) = 2e-022
Identities = 14/21 (66%), Positives = 19/21 (90%)
Frame = +1 / +2
Query: 421 QPPVTFVVVQXRHHTRLFANN 483
+PP+TF+VVQ RHHTRLF ++
Sbjct: 191 KPPITFIVVQKRHHTRLFPSD 253
Score = 28.6 bits (56), Expect(2) = 2e-022
Identities = 17/41 (41%), Positives = 23/41 (56%)
Frame = -3 / -3
Query: 372 IQQNLVELSLTDAIPVEYDPLWFLSSCPPERYEKLPDHATR 250
I QN EL+LT AIP+EY L + E E+L +A +
Sbjct: 145 ILQNHSELTLTYAIPIEYQLLGLVLGMLFE*KEELLSNALK 23
>gb|BU978254.1|BU978254 HA12N07r HA Hordeum vulgare subsp. vulgare cDNA clone HA12N07
5-PRIME, mRNA sequence
Length = 493
Score = 244 bits (528), Expect = 5e-064
Identities = 101/115 (87%), Positives = 108/115 (93%)
Frame = +1 / +2
Query: 40 VSDIATIIFGADVTHPHPGEDSSPSIAAVVAFQDWPEVTKYAGLVSAQAHRXXXIQDLFK 219
V+D TIIFGADVTHPHPGEDSSPSIAAVVA QDWPE+TKYAGLVSAQAHR IQDLFK
Sbjct: 149 VTDRPTIIFGADVTHPHPGEDSSPSIAAVVASQDWPEITKYAGLVSAQAHRQELIQDLFK 328
Query: 220 VWQDPERGTVSGGMIRELLISFWRATGQKPKRIIFYRDGVSEGQFYQVLLYELDA 384
VWQDP+RGTV+GGMI+ELLISF RATGQKP+RIIFYRDGVSEGQFYQVLL+ELDA
Sbjct: 329 VWQDPQRGTVTGGMIKELLISFKRATGQKPQRIIFYRDGVSEGQFYQVLLFELDA 493
Score = 212 bits (458), Expect = 2e-054
Identities = 95/115 (82%), Positives = 98/115 (85%)
Frame = -1 / -2
Query: 383 ASSSYNRTW*NCPSLTPSL*NMILFGFCPVALQKDMRSSLIMPPETVPLSGSCHTLKRSC 204
ASSS NRTW*NCPSLTPSL*NMIL GFCPVAL KDMRSSLIMPP TVPL GSCHTLKRSC
Sbjct: 492 ASSSNNRTW*NCPSLTPSL*NMIL*GFCPVALLKDMRSSLIMPPVTVPLWGSCHTLKRSC 313
Query: 203 IXXXRWA*ALTNPAYFVTSGQS*KATTAAMEGLESSPGWGWVTSAPKIIVAMSLT 39
I WA ALTNPAY V SGQS*+ATTAAMEGLESSPG G VTSAP I+V S+T
Sbjct: 312 ISSCLWAWALTNPAYLVISGQS*EATTAAMEGLESSPG*GCVTSAPNIMVGRSVT 148
Score = 168 bits (361), Expect = 6e-041
Identities = 75/115 (65%), Positives = 83/115 (72%)
Frame = -3 / -1
Query: 384 GIKFIQQNLVELSLTDAIPVEYDPLWFLSSCPPERYEKLPDHATRDSPPFGILPYLEKIL 205
GIKF QQNLVELSL D IPV+YD L FL SCP ERYEKL DHA S GILPY +KIL
Sbjct: 493 GIKFKQQNLVELSLADTIPVKYDSLRFLPSCPLERYEKLLDHAASHSSSLGILPYFKKIL 314
Query: 204 YXXXXMGLSTHQSCILCNLRPVLKSNHSCNGRTRIFPRMGMGHISTKDNSRYVTD 40
Y MGL TH SC+L LRPVL+SNHSCNGR IF R+ M +ISTK R V++
Sbjct: 313 YQLLPMGLGTH*SCVLSYLRPVLRSNHSCNGRAGIFSRVRMCNISTKYYGRSVSN 149
Score = 150 bits (322), Expect = 1e-035
Identities = 68/115 (59%), Positives = 74/115 (64%)
Frame = +3 / +1
Query: 39 CQ*HSDYYLWC*CDPSPSWGRXXXXXXXXXXXXRLA*GYKVCRIGECSSPSXXXDTGSFQ 218
C * +D+ +WC*C S W R RLA* V RI EC SP DTGSF
Sbjct: 148 CY*PTDHNIWC*CYTSSPWRRFQPFHCSCGCFSRLA*DN*VRRISECPSP*ARADTGSF* 327
Query: 219 GMARSRKGDCLWWHDQGASHIFLEGNWTETKEDHILQGWRQ*GTILPSSVV*T*C 383
MARS K +C W HDQGASHIF EGNW ET E+HILQGW Q GT+LPSSVV*T*C
Sbjct: 328 SMARSPKRNCDWRHDQGASHIFQEGNWAETSENHILQGWCQRGTVLPSSVV*T*C 492
Score = 148 bits (317), Expect = 7e-035
Identities = 74/106 (69%), Positives = 75/106 (70%)
Frame = -2 / -3
Query: 382 HQVHTTELGRIVPH*RHPCRI*SSLVSVQLPSRKI*EAP*SCHQRQSPFRDLAIP*KDPV 203
HQV TTELGR VP * HPC+I* S VS QLPS KI*EAP*SC Q Q F DLAI *KDPV
Sbjct: 491 HQVQTTELGRTVPR*HHPCKI*FSEVSAQLPS*KI*EAP*SCRQSQFLFGDLAIL*KDPV 312
Query: 202 SXXXDGLEHSPILHTL*PQASLEKQPQLQWKD*NLPQDGDGSHQHQ 65
S GL HS IL T QASLEKQPQLQWK NL Q D HQHQ
Sbjct: 311 SALAYGLGHSLILRT*LSQASLEKQPQLQWKGWNLLQGEDV*HQHQ 174
Score = 144 bits (309), Expect = 9e-034
Identities = 69/97 (71%), Positives = 72/97 (74%)
Frame = +2 / +3
Query: 92 LGKILVLPLQLWLLFKTGLRLQSMQDW*VLKPIXXX*YRIFSRYGKIPKGGLSLVA*SGS 271
L KI LPLQLWLL KTGLR S QD *V KPI *YRIF +YGKIPK L L A*S S
Sbjct: 201 LEKIPALPLQLWLLLKTGLR*LSTQD**VPKPIGKS*YRIFLKYGKIPKEEL*LAA*SRS 380
Query: 272 FSYLSGGQLDRNQRGSYSTGMASVRDNSTKFCCMNLM 382
FSYLS GQL RN R SY TGM S RD+STKFCC+NLM
Sbjct: 381 FSYLSRGQLGRNLRESYFTGMVSARDSSTKFCCLNLM 491
>gb|AV921670.1|AV921670 AV921670 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags12e13 3', mRNA sequence
Length = 589
Score = 160 bits (343), Expect(3) = 1e-063
Identities = 61/73 (83%), Positives = 68/73 (93%)
Frame = +1 / -2
Query: 601 QGTSRPAHYHVLWDENNFTADGLQTLTNNLCYTYARCTRSVSIVPPAYYAHLAAFRARFY 780
QGTSRPAHYHVLWDENNF+AD +QTLTNNLCYTYARCTRSVS+VPPAYYAHLAAFRARFY
Sbjct: 504 QGTSRPAHYHVLWDENNFSADEMQTLTNNLCYTYARCTRSVSVVPPAYYAHLAAFRARFY 325
Query: 781 MEPDTSDSGSMAS 819
MEP+ S++ + S
Sbjct: 324 MEPELSENHTSKS 286
Score = 77.1 bits (162), Expect(3) = 1e-063
Identities = 29/30 (96%), Positives = 29/30 (96%)
Frame = +1 / -1
Query: 517 NILPGTVVDSKICHPTEFDFYLCSHAGIQG 606
NILPGTVVDSKICHPTEFDFYLCSHAGI G
Sbjct: 589 NILPGTVVDSKICHPTEFDFYLCSHAGIPG 500
Score = 72.5 bits (152), Expect(3) = 2e-026
Identities = 38/63 (60%), Positives = 40/63 (63%)
Frame = -1 / +2
Query: 791 SGSM*NXXXXXXXXXXXAGGTIDTERVHLAYV*HKLLVRVCNPSAVKLFSSHRTW*WAGR 612
SGSM*N AGGT +TERVH A V* +L V VC SA KLFSS RTW* AG
Sbjct: 314 SGSM*NRARNAARCA*YAGGTTETERVHRA*V*QRLFVNVCISSAEKLFSSQRTW**AGL 493
Query: 611 LVP 603
LVP
Sbjct: 494 LVP 502
Score = 55.6 bits (115), Expect(3) = 2e-026
Identities = 24/31 (77%), Positives = 25/31 (80%)
Frame = -1 / +3
Query: 611 LVP*MPAWLHR*KSNSVGWQIFESTTVPGSM 519
L P +PA L R*KSNSVGW IFESTTVPG M
Sbjct: 495 LYPGIPA*LQR*KSNSVGWHIFESTTVPGKM 587
Score = 46.0 bits (94), Expect(3) = 1e-063
Identities = 17/27 (62%), Positives = 22/27 (81%)
Frame = +1 / -2
Query: 853 AAGVGNVAVRPLPALKENVKRVMFYC* 933
++G +V+PLPA+KE VKRVMFYC*
Sbjct: 285 SSGTNGTSVKPLPAVKEKVKRVMFYC* 205
Score = 29.0 bits (57), Expect(3) = 2e-026
Identities = 12/18 (66%), Positives = 13/18 (72%)
Frame = -1 / +2
Query: 929 Q*NMTRFTFSLRAGNGLT 876
Q*N+T FTFS AG G T
Sbjct: 209 Q*NITLFTFSFTAGKGFT 262
>gb|CB875233.1|CB875233 HX07K22w HX Hordeum vulgare subsp. vulgare cDNA clone HX07K22
3-PRIME, mRNA sequence
Length = 603
Score = 239 bits (516), Expect = 2e-062
Identities = 100/116 (86%), Positives = 100/116 (86%)
Frame = +1 / -3
Query: 586 SHAGIQGTSRPAHYHVLWDENNFTADGLQTLTNNLCYTYARCTRSVSIVPPAYYAHLAAF 765
SHAGIQGTSRPAHYHVLWDEN FTAD LQTLTNNLCYTYARCTRSVSIVPPAYYAHLAAF
Sbjct: 601 SHAGIQGTSRPAHYHVLWDENKFTADELQTLTNNLCYTYARCTRSVSIVPPAYYAHLAAF 422
Query: 766 RARFYMEPDTSDSGSMASRGPPPGGRNTKAAGVGNVAVRPLPALKENVKRVMFYC* 933
RARFYMEPDTSDSGSMAS P GNVAVRPLPALKENVKRVMFYC*
Sbjct: 421 RARFYMEPDTSDSGSMASGARGPPQGGRNNRAFGNVAVRPLPALKENVKRVMFYC* 254
Score = 162 bits (349), Expect = 3e-039
Identities = 82/116 (70%), Positives = 83/116 (71%)
Frame = -1 / +3
Query: 932 *Q*NMTRFTFSLRAGNGLTATFPTPAALVLRPPGGGPRLAIDPLSLVSGSM*NXXXXXXX 753
*Q*NMTRFTFS RAG GLTATFP L G LA+DPLS VSGSM*N
Sbjct: 255 *Q*NMTRFTFSFRAGRGLTATFPNALLLRPPCGGPRAPLAMDPLSEVSGSM*NRARKAAK 434
Query: 752 XXXXAGGTIDTERVHLAYV*HKLLVRVCNPSAVKLFSSHRTW*WAGRLVP*MPAWL 585
AGGTIDTERVHLAYV*HKL VRVCN SAV LFSSH T * AGRLVP*MPAWL
Sbjct: 435 CA*YAGGTIDTERVHLAYV*HKLFVRVCNSSAVNLFSSHST***AGRLVP*MPAWL 602
Score = 117 bits (251), Expect(3) = 4e-036
Identities = 50/80 (62%), Positives = 54/80 (67%)
Frame = -2 / +1
Query: 826 GHGLP*IHCHSYLAPCRTELGRLPGEHSMQEEQSILSVCT*HTCNTSCW*EFATHQP*SC 647
GH LP H APC+TE GRLP H+M E Q I S CT*HTC+TSC EFATHQ *+C
Sbjct: 361 GHHLPWTHYPRCPAPCKTEPGRLPNVHNMLEAQLIQSGCT*HTCSTSCLLEFATHQQ*TC 540
Query: 646 SHPTEHGNGQGGLFPECQHG 587
SHP N Q GLFPECQ G
Sbjct: 541 SHPIVRDNEQDGLFPECQRG 600
Score = 104 bits (221), Expect(2) = 1e-025
Identities = 47/79 (59%), Positives = 58/79 (73%)
Frame = -3 / +2
Query: 822 TACHRSTVTRIWLHVEPSSEGCQVSIVCRRNNRY*ACAPSIRVTQVVGESLQPISRKVVL 643
T CH T+ + LHV+PS EGCQ+ I+C R+N Y A APSIRV QVV SLQ IS ++VL
Sbjct: 365 TTCHGPTIRGVRLHVKPSPEGCQMCIICWRHN*YRAGAPSIRVAQVVC*SLQLISSELVL 544
Query: 642 IPQNMVMGRAACSLNASMA 586
IP ++M R ACSLNAS+A
Sbjct: 545 IP*YVIMSRTACSLNASVA 601
Score = 101 bits (215), Expect(3) = 2e-031
Identities = 47/79 (59%), Positives = 51/79 (64%)
Frame = +2 / -1
Query: 587 AMLAFREQAALPITMFCGMRTTLRLMGCKLSPTTCVTRMLGAHAQYRLFLLHTMLTWQPS 766
A LAFREQA L I + GMRT+ LM CKL TTC TRMLGA A Y+L L H M WQPS
Sbjct: 600 ATLAFREQAVLLIITYYGMRTSSLLMSCKL*QTTCATRMLGAPALYQLCLQHIMHIWQPS 421
Query: 767 ELGSTWSQIRVTVDLWQAV 823
LG TWS+ V WQ V
Sbjct: 420 GLGFTWSRTPRIVGPWQVV 364
Score = 69.3 bits (145), Expect(4) = 1e-021
Identities = 29/42 (69%), Positives = 35/42 (83%)
Frame = +3 / -2
Query: 588 PCWHSGNKPPCPLPCSVG*EQLYG*WVANSHQQLVLHVC*VH 713
P WHSGNKP C L ++G*EQ++ * VANS++QLVLHVC*VH
Sbjct: 599 PRWHSGNKPSCSLSRTMG*EQVHC**VANSNKQLVLHVC*VH 474
Score = 42.3 bits (86), Expect(3) = 4e-036
Identities = 17/29 (58%), Positives = 21/29 (72%)
Frame = -3 / +2
Query: 951 ALTASVLAVEHDPLHVFLEGR*WPHSNIP 865
A+T + L V+HD LHVFL+G P SNIP
Sbjct: 236 AVTTATLTVKHDTLHVFLQGGEGPDSNIP 322
Score = 41.8 bits (85), Expect(3) = 2e-031
Identities = 14/20 (70%), Positives = 16/20 (80%)
Frame = +3 / -2
Query: 864 WECCCEAITCPQGKREAGHV 923
WECCC+A P+GKREA HV
Sbjct: 323 WECCCQAPPRPEGKREACHV 264
Score = 34.1 bits (68), Expect(4) = 1e-021
Identities = 14/24 (58%), Positives = 17/24 (70%)
Frame = +3 / -2
Query: 756 GSLPSSVLHGARYE*QWIYGKPWP 827
GSLP SVLHGA + W++GK P
Sbjct: 431 GSLPGSVLHGAGHLG*WVHGKWCP 360
Score = 32.7 bits (65), Expect(2) = 1e-025
Identities = 16/24 (66%), Positives = 19/24 (79%)
Frame = -2 / +1
Query: 934 LSSRT*PASRFP*GQVMASQQHSQ 863
L+S+T* ASRFP G+ A QQHSQ
Sbjct: 253 LNSKT*HASRFPSGRGGA*QQHSQ 324
Score = 32.2 bits (64), Expect(4) = 1e-021
Identities = 18/30 (60%), Positives = 18/30 (60%)
Frame = +2 / -1
Query: 863 LGMLL*GHYLPSRKT*SGSCSTAKTDAVKA 952
LGMLL G P RKT*S SC T K V A
Sbjct: 324 LGMLLSGPSPP*RKT*SVSCFTVKVAVVTA 235
Score = 31.3 bits (62), Expect(3) = 2e-031
Identities = 12/22 (54%), Positives = 15/22 (68%)
Frame = +1 / -3
Query: 796 SDSGSMASRGPPPGGRNTKAAG 861
S S + +RGPP GGRN +A G
Sbjct: 385 SGSMASGARGPPQGGRNNRAFG 320
Score = 29.9 bits (59), Expect(3) = 4e-036
Identities = 13/22 (59%), Positives = 14/22 (63%)
Frame = -1 / +3
Query: 884 GLTATFPTPAALVLRPPGGGPR 819
G T P AL+LRPP GGPR
Sbjct: 297 GRGLTATFPNALLLRPPCGGPR 362
Score = 22.1 bits (42), Expect(4) = 1e-021
Identities = 8/12 (66%), Positives = 8/12 (66%)
Frame = +3 / -2
Query: 819 PWPSTRGAQHQG 854
PWPST Q QG
Sbjct: 362 PWPSTGWTQ*QG 327
>gb|BG414215.1|BG414215 HVSMEk0001E02f Hordeum vulgare testa/pericarp EST library
HVcDNA0013 (normal) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEk0001E02f, mRNA sequence
Length = 563
Score = 234 bits (506), Expect = 6e-061
Identities = 97/110 (88%), Positives = 103/110 (93%)
Frame = +1 / +3
Query: 40 VSDIATIIFGADVTHPHPGEDSSPSIAAVVAFQDWPEVTKYAGLVSAQAHRXXXIQDLFK 219
V+D TIIFGADVTHPHPGEDSSPSIAAVVA QDWPE+TKYAGLVSAQAHR IQDLFK
Sbjct: 231 VTDRPTIIFGADVTHPHPGEDSSPSIAAVVASQDWPEITKYAGLVSAQAHRQELIQDLFK 410
Query: 220 VWQDPERGTVSGGMIRELLISFWRATGQKPKRIIFYRDGVSEGQFYQVLL 369
VWQDP+RGTV+GGMI+ELLISF RATGQKP+RIIFYRDGVSEGQFYQVLL
Sbjct: 411 VWQDPQRGTVTGGMIKELLISFKRATGQKPQRIIFYRDGVSEGQFYQVLL 560
Score = 206 bits (444), Expect = 2e-052
Identities = 91/110 (82%), Positives = 94/110 (85%)
Frame = -1 / -2
Query: 368 NRTW*NCPSLTPSL*NMILFGFCPVALQKDMRSSLIMPPETVPLSGSCHTLKRSCIXXXR 189
NRTW*NCPSLTPSL*NMIL GFCPVAL KDMRSSLIMPP TVPL GSCHTLKRSCI
Sbjct: 559 NRTW*NCPSLTPSL*NMIL*GFCPVALLKDMRSSLIMPPVTVPLWGSCHTLKRSCISSCL 380
Query: 188 WA*ALTNPAYFVTSGQS*KATTAAMEGLESSPGWGWVTSAPKIIVAMSLT 39
WA ALTNPAY V SGQS*+ATTAAMEGLESSPG G VTSAP I+V S+T
Sbjct: 379 WAWALTNPAYLVISGQS*EATTAAMEGLESSPG*GCVTSAPNIMVGRSVT 230
Score = 160 bits (343), Expect = 2e-038
Identities = 71/110 (64%), Positives = 79/110 (71%)
Frame = -3 / -1
Query: 369 QQNLVELSLTDAIPVEYDPLWFLSSCPPERYEKLPDHATRDSPPFGILPYLEKILYXXXX 190
QQNLVELSL D IPV+YD L FL SCP ERYEKL DHA S GILPY +KILY
Sbjct: 560 QQNLVELSLADTIPVKYDSLRFLPSCPLERYEKLLDHAASHSSSLGILPYFKKILYQLLP 381
Query: 189 MGLSTHQSCILCNLRPVLKSNHSCNGRTRIFPRMGMGHISTKDNSRYVTD 40
MGL TH SC+L LRPVL+SNHSCNGR IF R+ M +ISTK R V++
Sbjct: 380 MGLGTH*SCVLSYLRPVLRSNHSCNGRAGIFSRVRMCNISTKYYGRSVSN 231
Score = 143 bits (306), Expect = 2e-033
Identities = 64/111 (57%), Positives = 70/111 (63%)
Frame = +3 / +2
Query: 39 CQ*HSDYYLWC*CDPSPSWGRXXXXXXXXXXXXRLA*GYKVCRIGECSSPSXXXDTGSFQ 218
C * +D+ +WC*C S W R RLA* V RI EC SP DTGSF
Sbjct: 230 CY*PTDHNIWC*CYTSSPWRRFQPFHCSCGCFSRLA*DN*VRRISECPSP*ARADTGSF* 409
Query: 219 GMARSRKGDCLWWHDQGASHIFLEGNWTETKEDHILQGWRQ*GTILPSSVV 371
MARS K +C W HDQGASHIF EGNW ET E+HILQGW Q GT+LPSSVV
Sbjct: 410 SMARSPKRNCDWRHDQGASHIFQEGNWAETSENHILQGWCQRGTVLPSSVV 562
Score = 140 bits (300), Expect = 1e-032
Identities = 71/102 (69%), Positives = 72/102 (70%)
Frame = -2 / -3
Query: 370 TTELGRIVPH*RHPCRI*SSLVSVQLPSRKI*EAP*SCHQRQSPFRDLAIP*KDPVSXXX 191
TTELGR VP * HPC+I* S VS QLPS KI*EAP*SC Q Q F DLAI *KDPVS
Sbjct: 561 TTELGRTVPR*HHPCKI*FSEVSAQLPS*KI*EAP*SCRQSQFLFGDLAIL*KDPVSALA 382
Query: 190 DGLEHSPILHTL*PQASLEKQPQLQWKD*NLPQDGDGSHQHQ 65
GL HS IL T QASLEKQPQLQWK NL Q D HQHQ
Sbjct: 381 YGLGHSLILRT*LSQASLEKQPQLQWKGWNLLQGEDV*HQHQ 256
Score = 136 bits (292), Expect = 2e-031
Identities = 66/93 (70%), Positives = 68/93 (73%)
Frame = +2 / +1
Query: 92 LGKILVLPLQLWLLFKTGLRLQSMQDW*VLKPIXXX*YRIFSRYGKIPKGGLSLVA*SGS 271
L KI LPLQLWLL KTGLR S QD *V KPI *YRIF +YGKIPK L L A*S S
Sbjct: 283 LEKIPALPLQLWLLLKTGLR*LSTQD**VPKPIGKS*YRIFLKYGKIPKEEL*LAA*SRS 462
Query: 272 FSYLSGGQLDRNQRGSYSTGMASVRDNSTKFCC 370
FSYLS GQL RN R SY TGM S RD+STKFCC
Sbjct: 463 FSYLSRGQLGRNLRESYFTGMVSARDSSTKFCC 561
>gb|BG417650.1|BG417650 HVSMEk0019A03f Hordeum vulgare testa/pericarp EST library
HVcDNA0013 (normal) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEk0019A03f, mRNA sequence
Length = 785
Score = 221 bits (477), Expect = 6e-057
Identities = 94/116 (81%), Positives = 102/116 (87%)
Frame = +1 / +2
Query: 97 EDSSPSIAAVVAFQDWPEVTKYAGLVSAQAHRXXXIQDLFKVWQDPERGTVSGGMIRELL 276
+DSSPSIAAVVA QDWPEVTKYAGLVSAQAHR IQDLFKVWQDP+RGTV+GGMI+ELL
Sbjct: 23 KDSSPSIAAVVASQDWPEVTKYAGLVSAQAHRQELIQDLFKVWQDPQRGTVTGGMIKELL 202
Query: 277 ISFWRATGQKPKRIIFYRDGVSEGQFYQVLLYELDAIRKACASLESDYQPPVTFVV 444
ISF RATGQKP+RIIFYRDGVS+G YQ LL ELDAI KACA LE ++QPP T VV
Sbjct: 203 ISFKRATGQKPQRIIFYRDGVSDGHIYQFLLSELDAIIKACACLEPNFQPPGTLVV 370
Score = 176 bits (378), Expect = 3e-043
Identities = 81/104 (77%), Positives = 85/104 (81%)
Frame = -1 / -3
Query: 410 SNDAQAFLMASSSYNRTW*NCPSLTPSL*NMILFGFCPVALQKDMRSSLIMPPETVPLSG 231
S A AF+MASSS R * PSLTPSL*NMIL+GFCPVAL K+MRSSLIMPP TVPL G
Sbjct: 336 SKHAHAFIMASSSDRRN**MWPSLTPSL*NMILWGFCPVALLKEMRSSLIMPPVTVPLWG 157
Query: 230 SCHTLKRSCIXXXRWA*ALTNPAYFVTSGQS*KATTAAMEGLES 99
SCHTLKRSCI WA ALTNPAY VTSGQS +ATTAAMEGLES
Sbjct: 156 SCHTLKRSCINSCLWAWALTNPAYLVTSGQSWEATTAAMEGLES 25
Score = 154 bits (331), Expect = 8e-037
Identities = 68/116 (58%), Positives = 82/116 (70%)
Frame = -3 / -2
Query: 444 HDKSNWRLVVRLQ*RTGLSNGIKFIQQNLVELSLTDAIPVEYDPLWFLSSCPPERYEKLP 265
+++S W L + LQ RT L NGIKF Q+ L+++++ D IPV+YD L FLS CP ER EKL
Sbjct: 370 NNQSTWGLEIGLQARTCLYNGIKFRQKKLIDVAIADTIPVKYDSLGFLSGCPLERNEKLL 191
Query: 264 DHATRDSPPFGILPYLEKILYXXXXMGLSTHQSCILCNLRPVLKSNHSCNGRTRIF 97
DHAT S GILPY +KILY MGL + SCIL +LRPVL SNHS NGRT IF
Sbjct: 190 DHATSHSSSLGILPYFKKILYQFLPMGLGAN*SCILSDLRPVLGSNHSSNGRTGIF 23
Score = 144 bits (309), Expect = 9e-034
Identities = 73/113 (64%), Positives = 77/113 (68%)
Frame = -2 / -1
Query: 436 K*LEAGSQTPMTHRPF*WHQVHTTELGRIVPH*RHPCRI*SSLVSVQLPSRKI*EAP*SC 257
K L AG+ P TH P *WHQV T E+ R * HPC+I* S VSV+LPS K *EAP*SC
Sbjct: 362 KYLGAGNWAPSTHMPL*WHQVQTEEIDRCGHR*HHPCKI*FSGVSVRLPS*KK*EAP*SC 183
Query: 256 HQRQSPFRDLAIP*KDPVSXXXDGLEHSPILHTL*PQASLEKQPQLQWKD*NL 98
HQ Q F DLAI *KDPVS GL ILHT *PQASL KQPQ QWKD NL
Sbjct: 182 HQSQFLFGDLAIL*KDPVSILAYGLGR*LILHT**PQASLGKQPQQQWKDWNL 24
Score = 138 bits (295), Expect = 7e-032
Identities = 63/100 (63%), Positives = 68/100 (68%)
Frame = +3 / +1
Query: 138 RLA*GYKVCRIGECSSPSXXXDTGSFQGMARSRKGDCLWWHDQGASHIFLEGNWTETKED 317
RLA*G+ VCRI SP DTGSF MARS K +C WWHDQGASH F EGN TET E+
Sbjct: 64 RLA*GH*VCRIS*RPSP*ARIDTGSF*SMARSPKRNCDWWHDQGASHFFQEGNRTETPEN 243
Query: 318 HILQGWRQ*GTILPSSVV*T*CH*KGLCVIGV*LPASSYF 437
HILQGW Q L S V*T*CH KG+CV+G PA YF
Sbjct: 244 HILQGWCQRWPHLSISSV*T*CHYKGMCVLGAQFPAPRYF 363
Score = 131 bits (281), Expect(2) = 1e-033
Identities = 67/102 (65%), Positives = 70/102 (68%)
Frame = +2 / +3
Query: 98 KILVLPLQLWLLFKTGLRLQSMQDW*VLKPIXXX*YRIFSRYGKIPKGGLSLVA*SGSFS 277
KI VLPL LWLL KTGLR SMQD KPI *YRIF +YGKIPK L LVA*S SFS
Sbjct: 24 KIPVLPLLLWLLPKTGLRSLSMQD*LAPKPIGKN*YRIFLKYGKIPKEEL*LVA*SRSFS 203
Query: 278 YLSGGQLDRNQRGSYSTGMASVRDNSTKFCCMNLMPLERPVR 403
+LS GQ DRN R SY TGM S S F C+NLMPL R VR
Sbjct: 204 FLSRGQPDRNPRESYFTGMVSAMATSINFFCLNLMPL*RHVR 329
Score = 32.2 bits (64), Expect(2) = 1e-033
Identities = 14/34 (41%), Positives = 18/34 (52%)
Frame = +1 / +1
Query: 391 KACASLESDYQPPVTFVVVQXRHHTRLFANNHND 492
K L + + P F R +TRLFA+NHND
Sbjct: 316 KGMCVLGAQFPAPRYFGCFLNRRYTRLFADNHND 417
>gb|BJ457634.1|BJ457634 BJ457634 K. Sato unpublished cDNA library, cv. Akashinriki
vegetative stage leaves Hordeum vulgare subsp. vulgare
cDNA clone baak28j10 3', mRNA sequence
Length = 463
Score = 166 bits (357), Expect(3) = 4e-046
Identities = 65/67 (97%), Positives = 66/67 (98%)
Frame = +1 / -2
Query: 619 AHYHVLWDENNFTADGLQTLTNNLCYTYARCTRSVSIVPPAYYAHLAAFRARFYMEPDTS 798
AHYHVLWDENNFTADGLQTLTNNLCYTYARCTRSVSIVPPAYYAHLAAFRARFYMEPDTS
Sbjct: 462 AHYHVLWDENNFTADGLQTLTNNLCYTYARCTRSVSIVPPAYYAHLAAFRARFYMEPDTS 283
Query: 799 DSGSMAS 819
D GS+AS
Sbjct: 282 DGGSVAS 262
Score = 92.7 bits (196), Expect(2) = 1e-026
Identities = 46/67 (68%), Positives = 48/67 (71%)
Frame = -1 / +2
Query: 818 LAIDPLSLVSGSM*NXXXXXXXXXXXAGGTIDTERVHLAYV*HKLLVRVCNPSAVKLFSS 639
LA +P S VSGSM*N AGGTIDTERVHLA V*H+L VRVC PSAVKLFSS
Sbjct: 263 LATEPPSEVSGSM*NRARKAAR*A*YAGGTIDTERVHLA*V*HRLFVRVCKPSAVKLFSS 442
Query: 638 HRTW*WA 618
RTW* A
Sbjct: 443 QRTW*CA 463
Score = 74.4 bits (156), Expect(2) = 9e-023
Identities = 36/61 (59%), Positives = 40/61 (65%)
Frame = +2 / -3
Query: 623 ITMFCGMRTTLRLMGCKLSPTTCVTRMLGAHAQYRLFLLHTMLTWQPSELGSTWSQIRVT 802
ITM GMRT L M C+LS TTC T GA YRL L HTMLT + ELGSTW++I T
Sbjct: 458 ITMSFGMRTILPRMVCRLSRTTCATPTQGAPVLYRLCLRHTMLTSRLFELGSTWNRIPPT 279
Query: 803 V 805
V
Sbjct: 278 V 276
Score = 52.8 bits (109), Expect(2) = 9e-023
Identities = 25/48 (52%), Positives = 28/48 (58%)
Frame = +1 / -2
Query: 790 DTSDSGSMASRGPPPGGRNTKAAGVGNVAVRPLPALKENVKRVMFYC* 933
D S A+ G P G + GNVAV+PLP L NVKRVMFYC*
Sbjct: 282 DGGSVASGATTGRGPTGARGGSRAAGNVAVKPLPDLN*NVKRVMFYC* 139
Score = 47.8 bits (98), Expect(2) = 1e-026
Identities = 23/39 (58%), Positives = 25/39 (64%)
Frame = -1 / +2
Query: 929 Q*NMTRFTFSLRAGNGLTATFPTPAALVLRPPGGGPRLA 813
Q*NMTRFTF LR+G GLTATFP P G P +A
Sbjct: 143 Q*NMTRFTF*LRSGRGLTATFPAALLPPRAPVGPRPVVA 259
Score = 32.2 bits (64), Expect(3) = 4e-046
Identities = 13/21 (61%), Positives = 13/21 (61%)
Frame = +3 / -1
Query: 861 CWECCCEAITCPQGKREAGHV 923
C ECCC A PQ KRE HV
Sbjct: 211 CRECCC*ASA*PQLKRETCHV 149
Score = 25.4 bits (49), Expect(3) = 4e-046
Identities = 7/20 (35%), Positives = 11/20 (55%)
Frame = +3 / -1
Query: 801 QWIYGKPWPSTRGAQHQGCR 860
+W + +PWP R + CR
Sbjct: 265 EWCHDRPWPYWRTRRQ*SCR 206
>gb|BU973725.1|BU973725 HB25M17r BC Hordeum vulgare subsp. vulgare cDNA clone HB25M17
5-PRIME, mRNA sequence
Length = 506
Score = 184 bits (396), Expect = 9e-046
Identities = 74/103 (71%), Positives = 78/103 (75%)
Frame = +1 / +1
Query: 559 PTEFDFYLCSHAGIQGTSRPAHYHVLWDENNFTADGLQTLTNNLCYTYARCTRSVSIVPP 738
PTEFDFYLCSHAGIQGTSRP HYHVL+DEN FTADGLQ LTNNLCYTYARCTRSVS+VPP
Sbjct: 13 PTEFDFYLCSHAGIQGTSRPTHYHVLFDENGFTADGLQQLTNNLCYTYARCTRSVSVVPP 192
Query: 739 AYYAHLAAFRARFYMEPDTSDSGSMASRGPPPGGRNTKAAGVG 867
AYYAHLAAFRAR+Y EP + G T A G
Sbjct: 193 AYYAHLAAFRARYYDEPSEGSDSASIVSGGTRESAATGAGAAG 321
Score = 108 bits (231), Expect = 5e-023
Identities = 47/60 (78%), Positives = 51/60 (85%)
Frame = -1 / -1
Query: 737 GGTIDTERVHLAYV*HKLLVRVCNPSAVKLFSSHRTW*WAGRLVP*MPAWLHR*KSNSVG 558
GGT +TERVH AYV*H+LLV C+PSAVK FSS RTW* G LVP*+PAWLHR*KSNSVG
Sbjct: 191 GGTTETERVHRAYV*HRLLVSCCSPSAVKPFSSKRTW**VGLLVP*IPAWLHR*KSNSVG 12
Score = 77.6 bits (163), Expect(2) = 1e-021
Identities = 41/77 (53%), Positives = 42/77 (54%)
Frame = +2 / +2
Query: 566 SLISTCAAMLAFREQAALPITMFCGMRTTLRLMGCKLSPTTCVTRMLGAHAQYRLFLLHT 745
SLISTC AM FR QA TM M+T MGC SPTTC T L A A LFLL T
Sbjct: 20 SLISTCVAMPVFRAQADQLTTMSSSMKTVSLPMGCSSSPTTCATHTLDALALSLLFLLPT 199
Query: 746 MLTWQPSELGSTWSQIR 796
LTW S G T S R
Sbjct: 200 TLTWLRSAHGITMSHQR 250
Score = 46.0 bits (94), Expect(2) = 1e-021
Identities = 21/46 (45%), Positives = 25/46 (54%)
Frame = +1 / +1
Query: 796 SDSGSMASRGPPPGGRNTKAAGVGNVAVRPLPALKENVKRVMFYC* 933
SDS S+ S G A A RPLP +++NVK VMFYC*
Sbjct: 253 SDSASIVSGGTRESAATGAGAAGPPAAFRPLPRIRDNVKEVMFYC* 390
>gb|CA028206.1|CA028206 HZ61F01r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ61F01
5-PRIME, mRNA sequence
Length = 468
Score = 127 bits (273), Expect(2) = 5e-044
Identities = 52/54 (96%), Positives = 53/54 (98%)
Frame = +1 / +1
Query: 658 ADGLQTLTNNLCYTYARCTRSVSIVPPAYYAHLAAFRARFYMEPDTSDSGSMAS 819
AD LQTLTNNLCYTYARCTRSVSIVPPAYYAHLAAFRARFYMEPDTSDSGS+AS
Sbjct: 1 ADELQTLTNNLCYTYARCTRSVSIVPPAYYAHLAAFRARFYMEPDTSDSGSVAS 162
Score = 90.4 bits (191), Expect(2) = 5e-025
Identities = 38/55 (69%), Positives = 40/55 (72%)
Frame = +2 / +2
Query: 659 LMGCKLSPTTCVTRMLGAHAQYRLFLLHTMLTWQPSELGSTWSQIRVTVDLWQAV 823
LM CKLS TTC TRML A A YRLFLLHTM WQPS LGSTWS+ T W+AV
Sbjct: 2 LMSCKLSQTTCATRMLDAPALYRLFLLHTMPIWQPSGLGSTWSRTPPTAGPWRAV 166
Score = 84.0 bits (177), Expect(2) = 4e-027
Identities = 36/55 (65%), Positives = 37/55 (67%)
Frame = -2 / -3
Query: 823 HGLP*IHCHSYLAPCRTELGRLPGEHSMQEEQSILSVCT*HTCNTSCW*EFATHQ 659
H P C APCRTE GRLP HSMQEEQSI S C HTC+T C *EFATHQ
Sbjct: 166 HRSPRTRCRRCPAPCRTEPGRLPDGHSMQEEQSIQSGCIEHTCSTGCL*EFATHQ 2
Score = 80.3 bits (169), Expect(2) = 4e-023
Identities = 38/55 (69%), Positives = 40/55 (72%)
Frame = -3 / -1
Query: 822 TACHRSTVTRIWLHVEPSSEGCQVSIVCRRNNRY*ACAPSIRVTQVVGESLQPIS 658
TA H V + LHVEPS EGCQ+ IVCRRNNRY A A SIRV QVV ESLQ IS
Sbjct: 165 TARHGPAVGGVRLHVEPSPEGCQMGIVCRRNNRYRAGASSIRVAQVVCESLQLIS 1
Score = 70.7 bits (148), Expect(2) = 5e-044
Identities = 31/47 (65%), Positives = 34/47 (72%)
Frame = +1 / +1
Query: 796 SDSGSMASRGPPPGGRNTKAAGVGNVAVRPLPALKENVKRVMFYC*D 936
S S + +RG PP G + GNVAVRPLPALKENVKRVMFYC*D
Sbjct: 145 SGSVASGARGGPPQGGPRSSTRFGNVAVRPLPALKENVKRVMFYC*D 285
Score = 57.9 bits (120), Expect(2) = 4e-027
Identities = 28/39 (71%), Positives = 28/39 (71%)
Frame = -1 / -2
Query: 935 S*Q*NMTRFTFSLRAGNGLTATFPTPAALVLRPPGGGPR 819
S*Q*NMTR TFSLRAG GLTATFP L P GG PR
Sbjct: 284 S*Q*NMTRLTFSLRAGRGLTATFPNLVLLRGPPCGGPPR 168
Score = 48.3 bits (99), Expect(2) = 4e-023
Identities = 22/47 (46%), Positives = 27/47 (57%)
Frame = -3 / -1
Query: 948 LTASVLAVEHDPLHVFLEGR*WPHSNIPNTGSLGVAPPWWRATACHR 808
+TA +LAV+HD L VFLEG P SN+P G+ W AT R
Sbjct: 297 VTARILAVKHDALDVFLEGGERPDSNVPKPGAAAWTALWRTATCTAR 157
Score = 44.6 bits (91), Expect(2) = 5e-025
Identities = 17/34 (50%), Positives = 21/34 (61%)
Frame = +3 / +3
Query: 822 WPSTRGAQHQGCRCWECCCEAITCPQGKREAGHV 923
W S+ G Q + WE CC+A PQGKR+A HV
Sbjct: 171 WRSSTGRSTQQHQVWERCCQASPRPQGKRQARHV 272
>gb|CK122310.1|CK122310 BES1824102n07 BES1824 Hordeum vulgare subsp. vulgare cDNA clone
MPMGp2010N072 5-PRIME, mRNA sequence
Length = 614
Score = 113 bits (242), Expect(2) = 8e-040
Identities = 45/46 (97%), Positives = 46/46 (100%)
Frame = +1 / +2
Query: 682 NNLCYTYARCTRSVSIVPPAYYAHLAAFRARFYMEPDTSDSGSMAS 819
NNLCYTYARCTRSVSIVPPAYYAHLAAFRARFYMEPDTSDSGS+AS
Sbjct: 2 NNLCYTYARCTRSVSIVPPAYYAHLAAFRARFYMEPDTSDSGSVAS 139
Score = 76.7 bits (161), Expect(2) = 5e-021
Identities = 32/47 (68%), Positives = 34/47 (72%)
Frame = +2 / +3
Query: 683 TTCVTRMLGAHAQYRLFLLHTMLTWQPSELGSTWSQIRVTVDLWQAV 823
TTC TRML A A YRLFLLHTM WQPS LGSTWS+ T W+AV
Sbjct: 3 TTCATRMLDAPALYRLFLLHTMPIWQPSGLGSTWSRTPPTAGPWRAV 143
Score = 71.2 bits (149), Expect(2) = 3e-023
Identities = 32/47 (68%), Positives = 34/47 (72%)
Frame = -3 / -2
Query: 822 TACHRSTVTRIWLHVEPSSEGCQVSIVCRRNNRY*ACAPSIRVTQVV 682
TA H V + LHVEPS EGCQ+ IVCRRNNRY A A SIRV QVV
Sbjct: 142 TARHGPAVGGVRLHVEPSPEGCQMGIVCRRNNRYRAGASSIRVAQVV 2
Score = 70.7 bits (148), Expect(2) = 8e-040
Identities = 31/47 (65%), Positives = 34/47 (72%)
Frame = +1 / +2
Query: 796 SDSGSMASRGPPPGGRNTKAAGVGNVAVRPLPALKENVKRVMFYC*D 936
S S + +RG PP G + GNVAVRPLPALKENVKRVMFYC*D
Sbjct: 122 SGSVASGARGGPPQGGPRSSTRFGNVAVRPLPALKENVKRVMFYC*D 262
Score = 57.9 bits (120), Expect(2) = 3e-023
Identities = 28/39 (71%), Positives = 28/39 (71%)
Frame = -1 / -3
Query: 935 S*Q*NMTRFTFSLRAGNGLTATFPTPAALVLRPPGGGPR 819
S*Q*NMTR TFSLRAG GLTATFP L P GG PR
Sbjct: 261 S*Q*NMTRLTFSLRAGRGLTATFPNLVLLRGPPCGGPPR 145
Score = 44.6 bits (91), Expect(2) = 5e-021
Identities = 17/34 (50%), Positives = 21/34 (61%)
Frame = +3 / +1
Query: 822 WPSTRGAQHQGCRCWECCCEAITCPQGKREAGHV 923
W S+ G Q + WE CC+A PQGKR+A HV
Sbjct: 148 WRSSTGRSTQQHQVWERCCQASPRPQGKRQARHV 249
>gb|BJ458585.1|BJ458585 BJ458585 K. Sato unpublished cDNA library, cv. Akashinriki
vegetative stage leaves Hordeum vulgare subsp. vulgare
cDNA clone baak32j21 3', mRNA sequence
Length = 614
Score = 138 bits (295), Expect(3) = 4e-039
Identities = 56/59 (94%), Positives = 57/59 (96%)
Frame = +1 / -2
Query: 643 ENNFTADGLQTLTNNLCYTYARCTRSVSIVPPAYYAHLAAFRARFYMEPDTSDSGSMAS 819
ENNFTADGLQTLTNNLCYTYARCTRSVSIVPPAYYAHLAAFRARFYME DTSD GS+AS
Sbjct: 613 ENNFTADGLQTLTNNLCYTYARCTRSVSIVPPAYYAHLAAFRARFYMELDTSDGGSVAS 437
Score = 77.1 bits (162), Expect(2) = 4e-023
Identities = 39/59 (66%), Positives = 41/59 (69%)
Frame = -1 / +3
Query: 818 LAIDPLSLVSGSM*NXXXXXXXXXXXAGGTIDTERVHLAYV*HKLLVRVCNPSAVKLFS 642
LA +P S VS SM*N AGGTIDTERVHLA V*H+L VRVC PSAVKLFS
Sbjct: 438 LATEPPSEVSSSM*NRARKAAR*A*YAGGTIDTERVHLA*V*HRLFVRVCKPSAVKLFS 614
Score = 63.4 bits (132), Expect(2) = 2e-021
Identities = 31/54 (57%), Positives = 34/54 (62%)
Frame = +2 / -3
Query: 644 RTTLRLMGCKLSPTTCVTRMLGAHAQYRLFLLHTMLTWQPSELGSTWSQIRVTV 805
RT L M C+LS TTC T GA YRL L HTMLT + ELGSTW+ I TV
Sbjct: 612 RTILPRMVCRLSRTTCATPTQGAPVLYRLCLRHTMLTSRLFELGSTWNWIPPTV 451
Score = 59.3 bits (123), Expect(2) = 2e-021
Identities = 27/48 (56%), Positives = 30/48 (62%)
Frame = +1 / -2
Query: 790 DTSDSGSMASRGPPPGGRNTKAAGVGNVAVRPLPALKENVKRVMFYC* 933
D S A+ G P G + GNVAV+PLP LKENVKRVMFYC*
Sbjct: 457 DGGSVASGATTGRGPTGARGGSRAAGNVAVKPLPDLKENVKRVMFYC* 314
Score = 51.5 bits (106), Expect(2) = 4e-023
Identities = 24/39 (61%), Positives = 26/39 (66%)
Frame = -1 / +3
Query: 929 Q*NMTRFTFSLRAGNGLTATFPTPAALVLRPPGGGPRLA 813
Q*NMTRFTFSLR+G GLTATFP P G P +A
Sbjct: 318 Q*NMTRFTFSLRSGRGLTATFPAALLPPRAPVGPRPVVA 434
Score = 36.8 bits (74), Expect(3) = 4e-039
Identities = 14/21 (66%), Positives = 14/21 (66%)
Frame = +3 / -1
Query: 861 CWECCCEAITCPQGKREAGHV 923
C ECCC A PQGKRE HV
Sbjct: 386 CRECCC*ASA*PQGKRETCHV 324
Score = 25.4 bits (49), Expect(3) = 4e-039
Identities = 7/20 (35%), Positives = 11/20 (55%)
Frame = +3 / -1
Query: 801 QWIYGKPWPSTRGAQHQGCR 860
+W + +PWP R + CR
Sbjct: 440 EWCHDRPWPYWRTRRQ*SCR 381
>gb|BJ450210.1|BJ450210 BJ450210 K. Sato unpublished cDNA library, cv. Akashinriki
vegetative stage leaves Hordeum vulgare subsp. vulgare
cDNA clone baak28j10 5', mRNA sequence
Length = 507
Score = 135 bits (289), Expect(3) = 3e-038
Identities = 54/57 (94%), Positives = 56/57 (98%)
Frame = +1 / +3
Query: 649 NFTADGLQTLTNNLCYTYARCTRSVSIVPPAYYAHLAAFRARFYMEPDTSDSGSMAS 819
+FTADGLQTLTNNLCYTYARCTRSVSIVPPAYYAHLAAFRARFYMEPDTSD GS+AS
Sbjct: 18 HFTADGLQTLTNNLCYTYARCTRSVSIVPPAYYAHLAAFRARFYMEPDTSDGGSVAS 188
Score = 73.5 bits (154), Expect(2) = 4e-022
Identities = 37/56 (66%), Positives = 39/56 (69%)
Frame = -1 / -3
Query: 818 LAIDPLSLVSGSM*NXXXXXXXXXXXAGGTIDTERVHLAYV*HKLLVRVCNPSAVK 651
LA +P S VSGSM*N AGGTIDTERVHLA V*H+L VRVC PSAVK
Sbjct: 187 LATEPPSEVSGSM*NRARKAAR*A*YAGGTIDTERVHLA*V*HRLFVRVCKPSAVK 20
Score = 51.5 bits (106), Expect(2) = 4e-022
Identities = 24/39 (61%), Positives = 26/39 (66%)
Frame = -1 / -3
Query: 929 Q*NMTRFTFSLRAGNGLTATFPTPAALVLRPPGGGPRLA 813
Q*NMTRFTFSLR+G GLTATFP P G P +A
Sbjct: 307 Q*NMTRFTFSLRSGRGLTATFPAALLPPRAPVGPRPVVA 191
Score = 36.8 bits (74), Expect(3) = 3e-038
Identities = 14/21 (66%), Positives = 14/21 (66%)
Frame = +3 / +2
Query: 861 CWECCCEAITCPQGKREAGHV 923
C ECCC A PQGKRE HV
Sbjct: 239 CRECCC*ASA*PQGKRETCHV 301
Score = 25.4 bits (49), Expect(3) = 3e-038
Identities = 7/20 (35%), Positives = 11/20 (55%)
Frame = +3 / +2
Query: 801 QWIYGKPWPSTRGAQHQGCR 860
+W + +PWP R + CR
Sbjct: 185 EWCHDRPWPYWRTRRQ*SCR 244
>gb|BG343570.1|BG343570 HVSMEg0006G18f Hordeum vulgare pre-anthesis spike EST library
HVcDNA0008 (white to yellow anther) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEg0006G18f, mRNA sequence
Length = 1070
Score = 69.3 bits (145), Expect(5) = 1e-036
Identities = 31/72 (43%), Positives = 42/72 (58%)
Frame = +1 / +1
Query: 34 PGVSDIATIIFGADVTHPHPGEDSSPSIAAVVAFQDWPEVTKYAGLVSAQAHRXXXIQDL 213
P VS + T+I G DV+H PG+ PSIAAVV ++WP V+KY V +Q+ + I L
Sbjct: 238 PLVSKVPTLILGMDVSHGSPGQSDIPSIAAVVGSREWPLVSKYRASVRSQSPKLEMIDSL 417
Query: 214 FKVWQDPERGTV 249
FK + G V
Sbjct: 418 FKPQGTEDDGLV 453
Score = 58.8 bits (122), Expect(5) = 1e-036
Identities = 25/50 (50%), Positives = 33/50 (66%)
Frame = +1 / +1
Query: 301 QKPKRIIFYRDGVSEGQFYQVLLYELDAIRKACASLESDYQPPVTFVVVQ 450
+KP + I +RDGVSE QF QVL ELD I +AC L+ ++ P T +V Q
Sbjct: 493 RKPDQNIIFRDGVSESQFNQVLNIELDQIIEACKVLDENWNPKFTLIVAQ 642
Score = 46.9 bits (96), Expect(5) = 1e-036
Identities = 21/55 (38%), Positives = 26/55 (47%)
Frame = +1 / +1
Query: 613 RPAHYHVLWDENNFTADGLQTLTNNLCYTYARCTRSVSIVPPAYYAHLAAFRARF 777
R HYH L DEN AD LQ L ++L Y Y R + +V + A A F
Sbjct: 778 RATHYHXLHDENTLAADDLQDLGHSLSYVYXRSQQPYQVVSQSVMXFAAVQGAHF 942
Score = 27.6 bits (54), Expect(5) = 1e-036
Identities = 8/18 (44%), Positives = 13/18 (72%)
Frame = +1 / +2
Query: 565 EFDFYLCSHAGIQGTSRP 618
++D Y+C+HAG G + P
Sbjct: 731 KYDXYMCAHAGNDGDTGP 784
Score = 24.0 bits (46), Expect(5) = 1e-036
Identities = 7/10 (70%), Positives = 9/10 (90%)
Frame = +1 / +3
Query: 532 TVVDSKICHP 561
TVVD+ +CHP
Sbjct: 699 TVVDNAVCHP 728
>emb|AJ234606.1|HVU234606 Hordeum vulgare genomic DNA fragment; clone MWG0876.uni
Length = 486
Score = 90.4 bits (191), Expect(4) = 3e-035
Identities = 34/53 (64%), Positives = 41/53 (77%)
Frame = +1 / -2
Query: 640 DENNFTADGLQTLTNNLCYTYARCTRSVSIVPPAYYAHLAAFRARFYMEPDTS 798
DEN F +D +Q L +NLCYT+ RCTR VS+VPPAYYAHLAA+R R Y+E S
Sbjct: 311 DENKFQSDEVQQLIHNLCYTFVRCTRPVSLVPPAYYAHLAAYRGRLYLERSDS 153
Score = 49.2 bits (101), Expect(4) = 3e-035
Identities = 19/25 (76%), Positives = 20/25 (80%)
Frame = +1 / -1
Query: 517 NILPGTVVDSKICHPTEFDFYLCSH 591
NI PGTVVD+ I H EFDFYLCSH
Sbjct: 432 NIPPGTVVDTVITHXREFDFYLCSH 358
Score = 33.1 bits (66), Expect(4) = 3e-035
Identities = 12/17 (70%), Positives = 15/17 (88%)
Frame = +1 / -2
Query: 883 PLPALKENVKRVMFYC* 933
PLP L ++VKR+MFYC*
Sbjct: 101 PLPKLTDSVKRLMFYC* 51
Score = 31.8 bits (63), Expect(4) = 3e-035
Identities = 10/14 (71%), Positives = 12/14 (85%)
Frame = +1 / -3
Query: 595 GIQGTSRPAHYHVL 636
G +GTSRP HYH+L
Sbjct: 355 GTKGTSRPTHYHIL 314
>gb|BQ663666.1|BQ663666 HU03I11u HU Hordeum vulgare subsp. vulgare cDNA clone HU03I11
3-PRIME, mRNA sequence
Length = 562
Score = 74.8 bits (157), Expect(4) = 2e-034
Identities = 33/40 (82%), Positives = 34/40 (85%)
Frame = +1 / -1
Query: 697 TYARCTRSVSIVPPAYYAHLAAFRARFYMEPDTSDSGSMA 816
T AR RSVSIVPPAYYAHLAAF ARFY E DTSDSGS+A
Sbjct: 397 TNARRIRSVSIVPPAYYAHLAAFWARFYTETDTSDSGSVA 278
Score = 51.0 bits (105), Expect(4) = 2e-034
Identities = 19/28 (67%), Positives = 24/28 (85%)
Frame = +1 / -1
Query: 538 VDSKICHPTEFDFYLCSHAGIQGTSRPA 621
+DSKI H EFD Y+C++AGIQGTS+PA
Sbjct: 562 IDSKIYHLMEFDCYICTNAGIQGTSQPA 479
Score = 50.1 bits (103), Expect(4) = 2e-034
Identities = 19/26 (73%), Positives = 20/26 (76%)
Frame = +1 / -2
Query: 622 HYHVLWDENNFTADGLQTLTNNLCYT 699
HY VLW+EN FTAD LQT NN CYT
Sbjct: 477 HYLVLWNENKFTADELQTPKNNSCYT 400
Score = 25.8 bits (50), Expect(4) = 2e-034
Identities = 8/15 (53%), Positives = 8/15 (53%)
Frame = +3 / -1
Query: 864 WECCCEAITCPQGKR 908
W CCC A C KR
Sbjct: 253 WICCCPASPCQDVKR 209
>gb|BG415324.2|BG415324 HVSMEk0006A22f Hordeum vulgare testa/pericarp EST library
HVcDNA0013 (normal) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEk0006A22f, mRNA sequence
Length = 639
Score = 144 bits (309), Expect = 9e-034
Identities = 54/93 (58%), Positives = 69/93 (74%)
Frame = +1 / +2
Query: 508 KSGNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENNFTADGLQTLTNN 687
K+GN+LPGTVVD++I P +DFYLCSH G+ GTSRP HY+ L DE+ + +D LQ L N
Sbjct: 2 KNGNVLPGTVVDTRIVDPVTYDFYLCSHNGLIGTSRPTHYYNLMDEHGYGSDDLQRLVYN 181
Query: 688 LCYTYARCTRSVSIVPPAYYAHLAAFRARFYME 786
LC+ +ARCT+ VS+ P YYA LAA+R R Y E
Sbjct: 182 LCFVFARCTKPVSLATPVYYADLAAYRGRLYYE 280
>emb|AJ234870.1|HVU234870 Hordeum vulgare genomic DNA fragment; clone MWG2264
Length = 447
Score = 87.2 bits (184), Expect(3) = 5e-033
Identities = 33/44 (75%), Positives = 38/44 (86%)
Frame = +1 / +1
Query: 391 KACASLESDYQPPVTFVVVQXRHHTRLFANNHNDNRAVDKSGNI 522
+ACASLE +YQPPVTFV+VQ RHHT+LFANNHND + DKS NI
Sbjct: 142 QACASLEPNYQPPVTFVIVQKRHHTKLFANNHNDKSSTDKSRNI 273
Score = 46.4 bits (95), Expect(3) = 5e-033
Identities = 19/21 (90%), Positives = 20/21 (95%)
Frame = +1 / +2
Query: 331 DGVSEGQFYQVLLYELDAIRK 393
DGVS GQF+QVLLYELDAIRK
Sbjct: 2 DGVSAGQFHQVLLYELDAIRK 64
Score = 46.0 bits (94), Expect(3) = 5e-033
Identities = 16/17 (94%), Positives = 17/17 (100%)
Frame = +1 / +2
Query: 529 GTVVDSKICHPTEFDFY 579
GTVVDSKICHPT+FDFY
Sbjct: 395 GTVVDSKICHPTQFDFY 445
>gb|BF629097.2|BF629097 HVSMEb0009N21f Hordeum vulgare seedling shoot EST library
HVcDNA0002 (Dehydration stress) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEb0009N21f, mRNA sequence
Length = 727
Score = 132 bits (282), Expect(2) = 3e-032
Identities = 52/116 (44%), Positives = 71/116 (61%)
Frame = +1 / +2
Query: 478 NNHNDNRAVDKSGNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENNFT 657
N+H + N+ PGTVVD ++CHP FDFY+C+HAG+ GTSRP HYHVL DE F+
Sbjct: 296 NHHTRFFQTNSPENVPPGTVVDKQVCHPKNFDFYMCAHAGMIGTSRPTHYHVLHDEIGFS 475
Query: 658 ADGLQTLTNNLCYTYARCTRSVSIVPPAYYAHLAAFRARFYMEPDTSDSGSMASRG 825
AD LQ ++L Y Y R T ++S+ P YAH+AA +M+ + S + G
Sbjct: 476 ADELQEFVHSLSYVYQRSTTAISVAAPIAYAHMAAAHVGTFMKFEDMSDTSSSHGG 643
Score = 29.9 bits (59), Expect(2) = 3e-032
Identities = 11/23 (47%), Positives = 17/23 (73%)
Frame = +1 / +2
Query: 238 RGTVSGGMIRELLISFWRATGQK 306
RGT G+IRE LI F+ ++G++
Sbjct: 77 RGTEDDGLIRESLIDFYTSSGKR 145
>gb|BE195976.3|BE195976 HVSMEh0091A07f Hordeum vulgare 5-45 DAP spike EST library
HVcDNA0009 (5 to 45 DAP) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEh0091A07f, mRNA sequence
Length = 1009
Score = 133 bits (286), Expect = 1e-030
Identities = 53/116 (45%), Positives = 72/116 (62%)
Frame = +1 / +1
Query: 478 NNHNDNRAVDKSGNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENNFT 657
N+H + N+ PGTVVD ++CHP FDFY+C+HAG+ GTSRP HYHVL DE F+
Sbjct: 133 NHHTRFFQTNSPENVPPGTVVDKQVCHPKNFDFYMCAHAGMIGTSRPTHYHVLHDEIGFS 312
Query: 658 ADGLQTLTNNLCYTYARCTRSVSIVPPAYYAHLAAFRARFYMEPDTSDSGSMASRG 825
AD LQ ++L Y Y R T ++S+ P YAHLAA + +M+ + S + G
Sbjct: 313 ADELQEFVHSLSYVYQRSTTAISVAAPIAYAHLAAAQVGTFMKFEDMSDTSSSQGG 480
>gb|BU975642.1|BU975642 HB31N05r BC Hordeum vulgare subsp. vulgare cDNA clone HB31N05
5-PRIME, mRNA sequence
Length = 617
Score = 133 bits (286), Expect = 1e-030
Identities = 53/116 (45%), Positives = 72/116 (62%)
Frame = +1 / +2
Query: 478 NNHNDNRAVDKSGNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENNFT 657
N+H + N+ PGTVVD ++CHP FDFY+C+HAG+ GTSRP HYHVL DE F+
Sbjct: 77 NHHTRFFQTNSPENVPPGTVVDKQVCHPKNFDFYMCAHAGMIGTSRPTHYHVLHDEIGFS 256
Query: 658 ADGLQTLTNNLCYTYARCTRSVSIVPPAYYAHLAAFRARFYMEPDTSDSGSMASRG 825
AD LQ ++L Y Y R T ++S+ P YAHLAA + +M+ + S + G
Sbjct: 257 ADELQEFVHSLSYVYQRSTTAISVAAPIAYAHLAAAQVGTFMKFEDMSDTSSSQGG 424
>gb|BU985772.1|BU985772 HF08J07r HF Hordeum vulgare subsp. vulgare cDNA clone HF08J07
5-PRIME, mRNA sequence
Length = 493
Score = 133 bits (286), Expect = 1e-030
Identities = 53/116 (45%), Positives = 72/116 (62%)
Frame = +1 / +1
Query: 478 NNHNDNRAVDKSGNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENNFT 657
N+H + N+ PGTVVD ++CHP FDFY+C+HAG+ GTSRP HYHVL DE F+
Sbjct: 109 NHHTRFFQTNSPENVPPGTVVDKQVCHPKNFDFYMCAHAGMIGTSRPTHYHVLHDEIGFS 288
Query: 658 ADGLQTLTNNLCYTYARCTRSVSIVPPAYYAHLAAFRARFYMEPDTSDSGSMASRG 825
AD LQ ++L Y Y R T ++S+ P YAHLAA + +M+ + S + G
Sbjct: 289 ADELQEFVHSLSYVYQRSTTAISVAAPIAYAHLAAAQVGTFMKFEDMSDTSSSQGG 456
>gb|BU969384.1|BU969384 HB11G01r BC Hordeum vulgare subsp. vulgare cDNA clone HB11G01
5-PRIME, mRNA sequence
Length = 548
Score = 133 bits (285), Expect = 2e-030
Identities = 52/116 (44%), Positives = 73/116 (62%)
Frame = +1 / +3
Query: 478 NNHNDNRAVDKSGNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENNFT 657
N+H N+ PGTVVD+ +CHP +DFY+C+HAG+ GT+RP HYH+L DE +F
Sbjct: 24 NHHTKFFMPGSPDNVPPGTVVDNAVCHPRNYDFYMCAHAGMIGTTRPTHYHILHDEIHFA 203
Query: 658 ADGLQTLTNNLCYTYARCTRSVSIVPPAYYAHLAAFRARFYMEPDTSDSGSMASRG 825
AD LQ L ++L Y Y R T ++S+V P YAHLAA + +++ D S + G
Sbjct: 204 ADDLQDLVHSLSYVYQRSTTAISVVSPICYAHLAAAQVAQFIKFDEMSETSSSQGG 371
>gb|CA031166.1|CA031166 HX09D06r HX Hordeum vulgare subsp. vulgare cDNA clone HX09D06
5-PRIME, mRNA sequence
Length = 647
Score = 133 bits (285), Expect = 2e-030
Identities = 52/116 (44%), Positives = 73/116 (62%)
Frame = +1 / +1
Query: 478 NNHNDNRAVDKSGNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENNFT 657
N+H N+ PGTVVD+ +CHP +DFY+C+HAG+ GT+RP HYH+L DE +F
Sbjct: 61 NHHTKFFMPGSPDNVPPGTVVDNAVCHPRNYDFYMCAHAGMIGTTRPTHYHILHDEIHFA 240
Query: 658 ADGLQTLTNNLCYTYARCTRSVSIVPPAYYAHLAAFRARFYMEPDTSDSGSMASRG 825
AD LQ L ++L Y Y R T ++S+V P YAHLAA + +++ D S + G
Sbjct: 241 ADDLQDLVHSLSYVYQRSTTAISVVSPICYAHLAAAQVAQFIKFDEMSETSSSQGG 408
>gb|CB876456.1|CB876456 HX11F07w HX Hordeum vulgare subsp. vulgare cDNA clone HX11F07
3-PRIME, mRNA sequence
Length = 641
Score = 133 bits (285), Expect = 2e-030
Identities = 52/116 (44%), Positives = 73/116 (62%)
Frame = +1 / -2
Query: 478 NNHNDNRAVDKSGNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENNFT 657
N+H N+ PGTVVD+ +CHP +DFY+C+HAG+ GT+RP HYH+L DE +F
Sbjct: 619 NHHTKFFMPGSPDNVPPGTVVDNAVCHPRNYDFYMCAHAGMIGTTRPTHYHILHDEIHFA 440
Query: 658 ADGLQTLTNNLCYTYARCTRSVSIVPPAYYAHLAAFRARFYMEPDTSDSGSMASRG 825
AD LQ L ++L Y Y R T ++S+V P YAHLAA + +++ D S + G
Sbjct: 439 ADDLQDLVHSLSYVYQRSTTAISVVSPICYAHLAAAQVAQFIKFDEMSETSSSQGG 272
>gb|BU974279.1|BU974279 HB27H05r BC Hordeum vulgare subsp. vulgare cDNA clone HB27H05
5-PRIME, mRNA sequence
Length = 461
Score = 133 bits (284), Expect = 2e-030
Identities = 51/103 (49%), Positives = 68/103 (66%)
Frame = +1 / +1
Query: 478 NNHNDNRAVDKSGNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENNFT 657
N+H + N+ PGTVVD ++CHP FDFY+C+HAG+ GTSRP HYHVL DE F+
Sbjct: 124 NHHTRFFQTNSPENVPPGTVVDKQVCHPKNFDFYMCAHAGMIGTSRPTHYHVLHDEIGFS 303
Query: 658 ADGLQTLTNNLCYTYARCTRSVSIVPPAYYAHLAAFRARFYME 786
AD LQ ++L Y Y R T ++S+ P YAHLAA + +M+
Sbjct: 304 ADELQEFVHSLSYVYQRSTTAISVAAPIAYAHLAAAQVGTFMK 432
>gb|AV918127.1|AV918127 AV918127 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags17p11 3', mRNA sequence
Length = 702
Score = 132 bits (283), Expect = 3e-030
Identities = 50/103 (48%), Positives = 70/103 (67%)
Frame = +1 / -3
Query: 517 NILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENNFTADGLQTLTNNLCY 696
N+ PGTVVD+ +CHP +DFY+C+HAG+ GT+RP HYH+L DE +F AD LQ L ++L Y
Sbjct: 679 NVPPGTVVDNAVCHPRNYDFYMCAHAGMIGTTRPTHYHILHDEIHFAADDLQDLVHSLSY 500
Query: 697 TYARCTRSVSIVPPAYYAHLAAFRARFYMEPDTSDSGSMASRG 825
Y R T ++S+V P YAHLAA + +++ D S + G
Sbjct: 499 VYQRSTTAISVVSPICYAHLAAAQVAQFIKFDEMSETSSSQGG 371
>gb|AV918379.1|AV918379 AV918379 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags20n15 3', mRNA sequence
Length = 662
Score = 132 bits (283), Expect = 3e-030
Identities = 50/103 (48%), Positives = 70/103 (67%)
Frame = +1 / -2
Query: 517 NILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENNFTADGLQTLTNNLCY 696
N+ PGTVVD+ +CHP +DFY+C+HAG+ GT+RP HYH+L DE +F AD LQ L ++L Y
Sbjct: 637 NVPPGTVVDNAVCHPRNYDFYMCAHAGMIGTTRPTHYHILHDEIHFAADDLQDLVHSLSY 458
Query: 697 TYARCTRSVSIVPPAYYAHLAAFRARFYMEPDTSDSGSMASRG 825
Y R T ++S+V P YAHLAA + +++ D S + G
Sbjct: 457 VYQRSTTAISVVSPICYAHLAAAQVAQFIKFDEMSETSSSQGG 329
>gb|BU971417.1|BU971417 HB17I20r BC Hordeum vulgare subsp. vulgare cDNA clone HB17I20
5-PRIME, mRNA sequence
Length = 502
Score = 132 bits (283), Expect = 3e-030
Identities = 50/103 (48%), Positives = 70/103 (67%)
Frame = +1 / +2
Query: 517 NILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENNFTADGLQTLTNNLCY 696
N+ PGTVVD+ +CHP +DFY+C+HAG+ GT+RP HYH+L DE +F AD LQ L ++L Y
Sbjct: 38 NVPPGTVVDNAVCHPRNYDFYMCAHAGMIGTTRPTHYHILHDEIHFAADDLQDLVHSLSY 217
Query: 697 TYARCTRSVSIVPPAYYAHLAAFRARFYMEPDTSDSGSMASRG 825
Y R T ++S+V P YAHLAA + +++ D S + G
Sbjct: 218 VYQRSTTAISVVSPICYAHLAAAQVAQFIKFDEMSETSSSQGG 346
>gb|CB874380.1|CB874380 HX05B15w HX Hordeum vulgare subsp. vulgare cDNA clone HX05B15
3-PRIME, mRNA sequence
Length = 626
Score = 132 bits (283), Expect = 3e-030
Identities = 50/103 (48%), Positives = 70/103 (67%)
Frame = +1 / -1
Query: 517 NILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENNFTADGLQTLTNNLCY 696
N+ PGTVVD+ +CHP +DFY+C+HAG+ GT+RP HYH+L DE +F AD LQ L ++L Y
Sbjct: 623 NVPPGTVVDNAVCHPRNYDFYMCAHAGMIGTTRPTHYHILHDEIHFAADDLQDLVHSLSY 444
Query: 697 TYARCTRSVSIVPPAYYAHLAAFRARFYMEPDTSDSGSMASRG 825
Y R T ++S+V P YAHLAA + +++ D S + G
Sbjct: 443 VYQRSTTAISVVSPICYAHLAAAQVAQFIKFDEMSETSSSQGG 315
>gb|CB875735.1|CB875735 HX09D06w HX Hordeum vulgare subsp. vulgare cDNA clone HX09D06
3-PRIME, mRNA sequence
Length = 674
Score = 132 bits (283), Expect = 3e-030
Identities = 50/103 (48%), Positives = 70/103 (67%)
Frame = +1 / -1
Query: 517 NILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENNFTADGLQTLTNNLCY 696
N+ PGTVVD+ +CHP +DFY+C+HAG+ GT+RP HYH+L DE +F AD LQ L ++L Y
Sbjct: 671 NVPPGTVVDNAVCHPRNYDFYMCAHAGMIGTTRPTHYHILHDEIHFAADDLQDLVHSLSY 492
Query: 697 TYARCTRSVSIVPPAYYAHLAAFRARFYMEPDTSDSGSMASRG 825
Y R T ++S+V P YAHLAA + +++ D S + G
Sbjct: 491 VYQRSTTAISVVSPICYAHLAAAQVAQFIKFDEMSETSSSQGG 363
>gb|CB875995.1|CB875995 HX09P10w HX Hordeum vulgare subsp. vulgare cDNA clone HX09P10
3-PRIME, mRNA sequence
Length = 626
Score = 132 bits (283), Expect = 3e-030
Identities = 50/103 (48%), Positives = 70/103 (67%)
Frame = +1 / -1
Query: 517 NILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENNFTADGLQTLTNNLCY 696
N+ PGTVVD+ +CHP +DFY+C+HAG+ GT+RP HYH+L DE +F AD LQ L ++L Y
Sbjct: 623 NVPPGTVVDNAVCHPRNYDFYMCAHAGMIGTTRPTHYHILHDEIHFAADDLQDLVHSLSY 444
Query: 697 TYARCTRSVSIVPPAYYAHLAAFRARFYMEPDTSDSGSMASRG 825
Y R T ++S+V P YAHLAA + +++ D S + G
Sbjct: 443 VYQRSTTAISVVSPICYAHLAAAQVAQFIKFDEMSETSSSQGG 315
>gb|AV918025.1|AV918025 AV918025 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags17h21 3', mRNA sequence
Length = 653
Score = 129 bits (277), Expect = 2e-029
Identities = 49/100 (49%), Positives = 68/100 (68%)
Frame = +1 / -2
Query: 526 PGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENNFTADGLQTLTNNLCYTYA 705
PGTVVD+ +CHP +DFY+C+HAG+ GT+RP HYH+L DE +F AD LQ L ++L Y Y
Sbjct: 652 PGTVVDNAVCHPRNYDFYMCAHAGMIGTTRPTHYHILHDEIHFAADDLQDLVHSLSYVYQ 473
Query: 706 RCTRSVSIVPPAYYAHLAAFRARFYMEPDTSDSGSMASRG 825
R T ++S+V P YAHLAA + +++ D S + G
Sbjct: 472 RSTTAISVVSPICYAHLAAAQVAQFIKFDEMSETSSSQGG 353
>gb|CB876294.1|CB876294 HX10N18w HX Hordeum vulgare subsp. vulgare cDNA clone HX10N18
3-PRIME, mRNA sequence
Length = 676
Score = 129 bits (277), Expect = 2e-029
Identities = 49/103 (47%), Positives = 69/103 (66%)
Frame = +1 / -1
Query: 517 NILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENNFTADGLQTLTNNLCY 696
N+ PGTVVD+ +CHP +DFY+C+HAG+ GT+ P HYH+L DE +F AD LQ L ++L Y
Sbjct: 670 NVPPGTVVDNAVCHPRNYDFYMCAHAGMIGTTXPTHYHILHDEIHFAADDLQDLVHSLSY 491
Query: 697 TYARCTRSVSIVPPAYYAHLAAFRARFYMEPDTSDSGSMASRG 825
Y R T ++S+V P YAHLAA + +++ D S + G
Sbjct: 490 VYQRSTTAISVVSPICYAHLAAAQVAQFIKFDEMSETSSSQGG 362
>gb|AV917119.1|AV917119 AV917119 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags20n15 5', mRNA sequence
Length = 593
Score = 77.6 bits (163), Expect(2) = 1e-028
Identities = 32/65 (49%), Positives = 41/65 (63%)
Frame = +1 / +1
Query: 301 QKPKRIIFYRDGVSEGQFYQVLLYELDAIRKACASLESDYQPPVTFVVVQXRHHTRLFAN 480
+KP +II +RDGVSE QF QVL ELD I +AC L+ ++ P T +V Q HHT+ F
Sbjct: 361 RKPDQIIIFRDGVSESQFNQVLNIELDQIIEACKFLDENWNPKFTLIVAQKNHHTKFFMP 540
Query: 481 NHNDN 495
DN
Sbjct: 541 GSPDN 555
Score = 69.3 bits (145), Expect(2) = 1e-028
Identities = 31/72 (43%), Positives = 42/72 (58%)
Frame = +1 / +1
Query: 34 PGVSDIATIIFGADVTHPHPGEDSSPSIAAVVAFQDWPEVTKYAGLVSAQAHRXXXIQDL 213
P VS + T+I G DV+H PG+ PSIAAVV ++WP V+KY V +Q+ + I L
Sbjct: 106 PLVSKVPTLILGMDVSHGSPGQSDIPSIAAVVGSREWPLVSKYRASVRSQSPKLEMIDSL 285
Query: 214 FKVWQDPERGTV 249
FK + G V
Sbjct: 286 FKPQGTEDDGLV 321
Database: Hordeum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:16 PM
Number of letters in database: 175,134,539
Number of sequences in database: 312,970
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 575,868,946
Number of Sequences: 312970
Number of extensions: 10233097
Number of successful extensions: 74397
Number of sequences better than 1.0e-020: 70
length of database: 58,378,179
effective HSP length: 53
effective length of database: 41,790,769
effective search space used: 13331255311
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)