TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 1804944.2.4
(667 letters)
Database: Hordeum_nucl_with_EST.fasta
312,970 sequences; 175,134,539 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BI949437.1|BI949437 HVSMEl0013O09f Hordeum vulgare spike... 228 3e-059
gb|AV917031.1|AV917031 AV917031 K. Sato unpublished cDNA li... 228 3e-059
gb|BG300950.1|BG300950 HVSMEb0019A22f Hordeum vulgare seedl... 221 4e-057
gb|BI955734.1|BI955734 HVSMEm0024E12f Hordeum vulgare green... 194 3e-055
gb|AV928513.1|AV928513 AV928513 K. Sato unpublished cDNA li... 201 3e-051
gb|BI960696.1|BI960696 HVSMEn0025O11f Hordeum vulgare rachi... 200 7e-051
gb|BI958555.1|BI958555 HVSMEn0015J16f Hordeum vulgare rachi... 198 2e-050
gb|AV913278.1|AV913278 AV913278 K. Sato unpublished cDNA li... 193 8e-050
gb|AV930365.1|AV930365 AV930365 K. Sato unpublished cDNA li... 193 8e-050
gb|BU990492.1|BU990492 HF25D10r HF Hordeum vulgare subsp. v... 193 8e-050
gb|BQ465284.1|BQ465284 HU03C22r HU Hordeum vulgare subsp. v... 193 8e-050
gb|AV918572.1|AV918572 AV918572 K. Sato unpublished cDNA li... 193 8e-050
gb|BI959339.1|BI959339 HVSMEn0019E20f Hordeum vulgare rachi... 193 9e-050
gb|CA025840.1|CA025840 HZ53E19r HZ Hordeum vulgare subsp. v... 196 1e-049
gb|BQ660846.1|BQ660846 HI05L24u HI Hordeum vulgare subsp. v... 191 2e-049
gb|BU971759.1|BU971759 HB19J12r BC Hordeum vulgare subsp. v... 194 4e-049
gb|AV913277.1|AV913277 AV913277 K. Sato unpublished cDNA li... 193 8e-049
gb|AV920051.1|AV920051 AV920051 K. Sato unpublished cDNA li... 193 8e-049
gb|AV930906.1|AV930906 AV930906 K. Sato unpublished cDNA li... 193 8e-049
gb|AV934882.1|AV934882 AV934882 K. Sato unpublished cDNA li... 193 8e-049
gb|BM816139.1|BM816139 HC105G09_T3.ab1 HC Hordeum vulgare s... 193 8e-049
gb|BJ466285.1|BJ466285 BJ466285 K. Sato unpublished cDNA li... 193 8e-049
gb|BU967242.1|BU967242 HB03K11r BC Hordeum vulgare subsp. v... 193 8e-049
gb|CB860194.1|CB860194 HI12P13w HI Hordeum vulgare subsp. v... 193 8e-049
gb|CB876338.1|CB876338 HX10P19w HX Hordeum vulgare subsp. v... 193 8e-049
gb|BQ766406.1|BQ766406 EBro08_SQ005_L20_R root, 3 week, dro... 188 2e-048
gb|AV918571.1|AV918571 AV918571 K. Sato unpublished cDNA li... 188 2e-048
gb|AV936150.1|AV936150 AV936150 K. Sato unpublished cDNA li... 188 3e-048
gb|AV919198.1|AV919198 AV919198 K. Sato unpublished cDNA li... 188 3e-048
gb|AV931092.1|AV931092 AV931092 K. Sato unpublished cDNA li... 191 3e-048
gb|AV931093.1|AV931093 AV931093 K. Sato unpublished cDNA li... 191 3e-048
gb|BQ468619.1|BQ468619 HM01M13T HM Hordeum vulgare subsp. v... 190 5e-048
gb|BI776485.2|BI776485 EBpi05_SQ001_J01_R pistil, 8 DPA, no... 189 1e-047
gb|AJ462437.1|AJ462437 AJ462437 S00002 Hordeum vulgare subs... 188 3e-047
gb|BU967165.1|BU967165 HB03H16r BC Hordeum vulgare subsp. v... 188 3e-047
gb|AV914933.1|AV914933 AV914933 K. Sato unpublished cDNA li... 181 4e-045
gb|AV925215.1|AV925215 AV925215 K. Sato unpublished cDNA li... 177 4e-044
gb|BM370580.2|BM370580 EBro08_SQ004_K11_R root, 3 week, dro... 177 4e-044
gb|AL503512.1|AL503512 AL503512 Hordeum vulgare Barke roots... 172 1e-042
gb|BQ660756.1|BQ660756 HI05F03u HI Hordeum vulgare subsp. v... 172 1e-042
gb|CA030609.1|CA030609 HX07J05r HX Hordeum vulgare subsp. v... 172 1e-042
gb|CA030647.1|CA030647 HX07L05r HX Hordeum vulgare subsp. v... 172 1e-042
gb|CB875201.1|CB875201 HX07J05w HX Hordeum vulgare subsp. v... 172 1e-042
gb|CB875240.1|CB875240 HX07L05w HX Hordeum vulgare subsp. v... 172 1e-042
gb|BG368285.2|BG368285 HVSMEi0017H01f Hordeum vulgare 20 DA... 167 4e-041
gb|AV929091.1|AV929091 AV929091 K. Sato unpublished cDNA li... 167 4e-041
gb|BJ460872.1|BJ460872 BJ460872 K. Sato unpublished cDNA li... 167 4e-041
gb|BQ469740.1|BQ469740 HZ01L16r HZ Hordeum vulgare subsp. v... 167 4e-041
gb|BF259974.3|BF259974 HVSMEf0020M07f Hordeum vulgare seedl... 166 8e-041
gb|AV923333.1|AV923333 AV923333 K. Sato unpublished cDNA li... 166 8e-041
gb|BU986849.1|BU986849 HF13B10r HF Hordeum vulgare subsp. v... 166 8e-041
gb|BM816138.1|BM816138 HC109B12_T3.ab1 HC Hordeum vulgare s... 160 9e-041
gb|AV923841.1|AV923841 AV923841 K. Sato unpublished cDNA li... 164 2e-040
gb|AV927219.1|AV927219 AV927219 K. Sato unpublished cDNA li... 161 3e-039
gb|BG343763.2|BG343763 HVSMEg0006L01f Hordeum vulgare pre-a... 156 5e-039
gb|BJ447699.1|BJ447699 BJ447699 K. Sato unpublished cDNA li... 160 7e-039
gb|BJ455449.1|BJ455449 BJ455449 K. Sato unpublished cDNA li... 160 7e-039
gb|BJ447591.1|BJ447591 BJ447591 K. Sato unpublished cDNA li... 156 6e-038
gb|CA017356.1|CA017356 HV12L21u HV Hordeum vulgare subsp. v... 151 2e-037
gb|AL499724.1|AL499724 AL499724 Hordeum vulgare Barke etiol... 154 6e-037
gb|BE411751.1|BE411751 ISC008.H06F990806 ITEC ISC Barley Le... 138 1e-034
gb|BJ468308.1|BJ468308 BJ468308 K. Sato unpublished cDNA li... 144 3e-034
gb|BE411894.1|BE411894 ISC010.D05F990917 ITEC ISC Barley Le... 130 6e-034
gb|AV914152.1|AV914152 AV914152 K. Sato unpublished cDNA li... 140 6e-033
gb|BQ663566.1|BQ663566 HU03C22u HU Hordeum vulgare subsp. v... 136 8e-033
gb|BI959331.1|BI959331 HVSMEn0019E12f Hordeum vulgare rachi... 136 1e-031
gb|BI956663.1|BI956663 HVSMEn0004K08f Hordeum vulgare rachi... 129 1e-029
gb|AL503049.1|AL503049 AL503049 Hordeum vulgare Barke roots... 128 3e-029
gb|BF259601.3|BF259601 HVSMEf0019M06f Hordeum vulgare seedl... 128 3e-029
gb|BQ465804.1|BQ465804 HU04L18r HU Hordeum vulgare subsp. v... 126 1e-028
gb|BQ469182.1|BQ469182 HM03K08r HM Hordeum vulgare subsp. v... 120 7e-027
gb|CA011082.1|CA011082 HT07B01u HT Hordeum vulgare subsp. v... 119 2e-026
gb|AV910504.1|AV910504 AV910504 K. Sato unpublished cDNA li... 117 5e-026
gb|CA015920.1|CA015920 HV11G20u HV Hordeum vulgare subsp. v... 113 8e-025
gb|BI956576.1|BI956576 HVSMEn0004D17f Hordeum vulgare rachi... 113 1e-024
gb|BE060456.3|BE060456 HVSMEg0012F17f Hordeum vulgare pre-a... 113 1e-024
gb|BJ452844.1|BJ452844 BJ452844 K. Sato unpublished cDNA li... 110 3e-024
gb|AV927371.1|AV927371 AV927371 K. Sato unpublished cDNA li... 110 4e-024
gb|BU988138.1|BU988138 HF16M09r HF Hordeum vulgare subsp. v... 111 5e-024
gb|CA025257.1|CA025257 HZ51J24r HZ Hordeum vulgare subsp. v... 111 5e-024
gb|AV918285.1|AV918285 AV918285 K. Sato unpublished cDNA li... 107 2e-023
gb|AV836878.1|AV836878 AV836878 K. Sato unpublished cDNA li... 108 4e-023
gb|BM817226.1|BM817226 HC109A10_T3.ab1 HC Hordeum vulgare s... 108 4e-023
gb|BQ464910.1|BQ464910 HU02B19r HU Hordeum vulgare subsp. v... 108 4e-023
gb|BQ661800.1|BQ661800 HP01F17w HP Hordeum vulgare subsp. v... 108 4e-023
gb|BG299430.2|BG299430 HVSMEa0019P14f Hordeum vulgare seedl... 92 8e-022
gb|BM815945.1|BM815945 HC105B07_T3.ab1 HC Hordeum vulgare s... 101 3e-021
gb|BJ453328.1|BJ453328 BJ453328 K. Sato unpublished cDNA li... 100 6e-021
>gb|BI949437.1|BI949437 HVSMEl0013O09f Hordeum vulgare spike EST library HVcDNA0012
(Fusarium infected) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEl0013O09f, mRNA sequence
Length = 938
Score = 228 bits (492), Expect = 3e-059
Identities = 92/113 (81%), Positives = 96/113 (84%)
Frame = +3 / +1
Query: 3 TFKWXXXXXXXXXXXXXNFIGVVAGVSNAINNGYESWGPLFGKLFFAFWVIVHLYPFLKG 182
TFKW NFIGVVAG+SNAINNGYESWGPLFGKLFFAFWVIVHLYPFLKG
Sbjct: 121 TFKWTTLLIPPTTLLLLNFIGVVAGISNAINNGYESWGPLFGKLFFAFWVIVHLYPFLKG 300
Query: 183 LVGRQNRTPTIVIVWSILLASIFSLLWVRIDPFLAKDDGPLLEECGLDCN*GM 341
L+GRQNRTPTIVIVWSILLASI SLLWVR++PFLAK DGPLLEECGLDC * M
Sbjct: 301 LLGRQNRTPTIVIVWSILLASIISLLWVRVNPFLAKTDGPLLEECGLDCT*EM 459
Score = 196 bits (422), Expect = 1e-049
Identities = 82/95 (86%), Positives = 87/95 (91%)
Frame = -1 / -1
Query: 286 ARKGSIRTQRSEKIEASRMDQTMTIVGVLFCLPTKPLRKGYRWTITQNAKKSFPKRGPHD 107
ARKG RT RSE IEA+RMDQT+TIVGVLFCLP +PLR GYR TITQNAKKSFPKRGPHD
Sbjct: 404 ARKGFTRTHRSEMIEANRMDQTITIVGVLFCLPNRPLRNGYR*TITQNAKKSFPKRGPHD 225
Query: 106 SYPLLIALETPATTPMKFNRSKVVGGINKVVHLNV 2
SYPLLIALE PATTPMKF+RS+VVGGINKVVHLNV
Sbjct: 224 SYPLLIALEMPATTPMKFSRSRVVGGINKVVHLNV 120
Score = 151 bits (325), Expect = 3e-036
Identities = 63/113 (55%), Positives = 85/113 (75%)
Frame = -3 / -3
Query: 341 HPLVAIQTTLLKKWTIILCKERVNPNPKE*ED*SQQDGPDDDNCRCPVLPPNQTFEEGIQ 162
H L A+QT LL+K + L +ERV+ +P+E +D SQQDGPDD + R PVLP QT EE +Q
Sbjct: 459 HLLGAVQTALLQKRAVGLGEERVHTHPQERDDRSQQDGPDDHDRRGPVLPSQQTLEERVQ 280
Query: 161 MDNHPKCKEELPEEGAP*LVSIIDCIGNTSDHTNEVQ*EQSGRRYQ*GSPFKC 3
M+NHP+ +EELPEE P* +S++DC+G+ S+HT+EVQ +Q GR Q G PF+C
Sbjct: 279 MNNHPEREEELPEERPP*FISVVDCVGDASNHTDEVQQKQGGRGNQQGCPFEC 121
Score = 124 bits (266), Expect = 4e-028
Identities = 58/116 (50%), Positives = 71/116 (61%)
Frame = -2 / -2
Query: 348 VLTSPSCNPNHTPQEVDHHPLQGKGQSEPKGVRRLKPAGWTRR*QLSVSCFASQPNL*GR 169
+++SP C+P+ TP E +GKG P G R KP GWTRR + S SC A + *G
Sbjct: 466 IISSPRCSPDRTPPEEGRRSWRGKGSHAPTGAR*SKPTGWTRRSRSSGSCSAFPTDP*GT 287
Query: 168 DTDGQSPKMQRRASRRGGPMTRIHY*LHWKHQRPHQ*SSIGAKW*EVSIR*SI*MC 1
TD QSP+ +RRASRR PM I *L W+ Q+PH+*SS A W S R SI*MC
Sbjct: 286 GTDEQSPRTRRRASRREAPMIHIRC*LRWRCQQPHR*SSAEAGWSGESTRLSI*MC 119
Score = 120 bits (256), Expect = 9e-027
Identities = 59/113 (52%), Positives = 72/113 (63%)
Frame = +2 / +3
Query: 2 HI*MDYLIDTSYHFAPIELHWCGRWCFQCNQ*WIRVMGPPLREALLCILGDCPSVSLPQR 181
HI MD L+D+ H A ELH CG W Q NQ I +MG LREALL +LGDC SV +PQ
Sbjct: 120 HIQMDNLVDSPDHPASAELHRCGCWHLQRNQQRI*IMGASLREALLRVLGDCSSVPVPQG 299
Query: 182 FGWEAKQDTDNCHRLVHPAGFNLLTPLGSD*PFPCKG*WSTS*GVWFGLQLGD 340
+A+QD D+ RLVHP GF+ L P+G+ PFP + +S GV GL LGD
Sbjct: 300 SVGKAEQDPDDRDRLVHPVGFDHLAPVGACEPFPRQDRRPSSGGVRSGLHLGD 458
>gb|AV917031.1|AV917031 AV917031 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags20i09 5', mRNA sequence
Length = 579
Score = 228 bits (492), Expect = 3e-059
Identities = 92/113 (81%), Positives = 96/113 (84%)
Frame = +3 / +2
Query: 3 TFKWXXXXXXXXXXXXXNFIGVVAGVSNAINNGYESWGPLFGKLFFAFWVIVHLYPFLKG 182
TFKW NFIGVVAG+SNAINNGYESWGPLFGKLFFAFWVIVHLYPFLKG
Sbjct: 89 TFKWTTLLIPPTTLLLLNFIGVVAGISNAINNGYESWGPLFGKLFFAFWVIVHLYPFLKG 268
Query: 183 LVGRQNRTPTIVIVWSILLASIFSLLWVRIDPFLAKDDGPLLEECGLDCN*GM 341
L+GRQNRTPTIVIVWSILLASI SLLWVR++PFLAK DGPLLEECGLDC * M
Sbjct: 269 LLGRQNRTPTIVIVWSILLASIISLLWVRVNPFLAKTDGPLLEECGLDCT*EM 427
Score = 196 bits (422), Expect = 1e-049
Identities = 82/95 (86%), Positives = 87/95 (91%)
Frame = -1 / -1
Query: 286 ARKGSIRTQRSEKIEASRMDQTMTIVGVLFCLPTKPLRKGYRWTITQNAKKSFPKRGPHD 107
ARKG RT RSE IEA+RMDQT+TIVGVLFCLP +PLR GYR TITQNAKKSFPKRGPHD
Sbjct: 372 ARKGFTRTHRSEMIEANRMDQTITIVGVLFCLPNRPLRNGYR*TITQNAKKSFPKRGPHD 193
Query: 106 SYPLLIALETPATTPMKFNRSKVVGGINKVVHLNV 2
SYPLLIALE PATTPMKF+RS+VVGGINKVVHLNV
Sbjct: 192 SYPLLIALEMPATTPMKFSRSRVVGGINKVVHLNV 88
Score = 151 bits (325), Expect = 3e-036
Identities = 63/113 (55%), Positives = 85/113 (75%)
Frame = -3 / -3
Query: 341 HPLVAIQTTLLKKWTIILCKERVNPNPKE*ED*SQQDGPDDDNCRCPVLPPNQTFEEGIQ 162
H L A+QT LL+K + L +ERV+ +P+E +D SQQDGPDD + R PVLP QT EE +Q
Sbjct: 427 HLLGAVQTALLQKRAVGLGEERVHTHPQERDDRSQQDGPDDHDRRGPVLPSQQTLEERVQ 248
Query: 161 MDNHPKCKEELPEEGAP*LVSIIDCIGNTSDHTNEVQ*EQSGRRYQ*GSPFKC 3
M+NHP+ +EELPEE P* +S++DC+G+ S+HT+EVQ +Q GR Q G PF+C
Sbjct: 247 MNNHPEREEELPEERPP*FISVVDCVGDASNHTDEVQQKQGGRGNQQGCPFEC 89
Score = 124 bits (266), Expect = 4e-028
Identities = 58/116 (50%), Positives = 71/116 (61%)
Frame = -2 / -2
Query: 348 VLTSPSCNPNHTPQEVDHHPLQGKGQSEPKGVRRLKPAGWTRR*QLSVSCFASQPNL*GR 169
+++SP C+P+ TP E +GKG P G R KP GWTRR + S SC A + *G
Sbjct: 434 IISSPRCSPDRTPPEEGRRSWRGKGSHAPTGAR*SKPTGWTRRSRSSGSCSAFPTDP*GT 255
Query: 168 DTDGQSPKMQRRASRRGGPMTRIHY*LHWKHQRPHQ*SSIGAKW*EVSIR*SI*MC 1
TD QSP+ +RRASRR PM I *L W+ Q+PH+*SS A W S R SI*MC
Sbjct: 254 GTDEQSPRTRRRASRREAPMIHIRC*LRWRCQQPHR*SSAEAGWSGESTRLSI*MC 87
Score = 120 bits (256), Expect = 9e-027
Identities = 59/113 (52%), Positives = 72/113 (63%)
Frame = +2 / +1
Query: 2 HI*MDYLIDTSYHFAPIELHWCGRWCFQCNQ*WIRVMGPPLREALLCILGDCPSVSLPQR 181
HI MD L+D+ H A ELH CG W Q NQ I +MG LREALL +LGDC SV +PQ
Sbjct: 88 HIQMDNLVDSPDHPASAELHRCGCWHLQRNQQRI*IMGASLREALLRVLGDCSSVPVPQG 267
Query: 182 FGWEAKQDTDNCHRLVHPAGFNLLTPLGSD*PFPCKG*WSTS*GVWFGLQLGD 340
+A+QD D+ RLVHP GF+ L P+G+ PFP + +S GV GL LGD
Sbjct: 268 SVGKAEQDPDDRDRLVHPVGFDHLAPVGACEPFPRQDRRPSSGGVRSGLHLGD 426
>gb|BG300950.1|BG300950 HVSMEb0019A22f Hordeum vulgare seedling shoot EST library
HVcDNA0002 (Dehydration stress) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEb0019A22f, mRNA sequence
Length = 619
Score = 221 bits (476), Expect = 4e-057
Identities = 88/96 (91%), Positives = 92/96 (95%)
Frame = +3 / +1
Query: 54 NFIGVVAGVSNAINNGYESWGPLFGKLFFAFWVIVHLYPFLKGLVGRQNRTPTIVIVWSI 233
NFIGVVAG+SNAINNGYESWGPLFGKLFFAFWVIVHLYPFLKGL+GRQNRTPTIVIVWSI
Sbjct: 31 NFIGVVAGISNAINNGYESWGPLFGKLFFAFWVIVHLYPFLKGLLGRQNRTPTIVIVWSI 210
Query: 234 LLASIFSLLWVRIDPFLAKDDGPLLEECGLDCN*GM 341
LLASI SLLWVR++PFLAK DGPLLEECGLDC * M
Sbjct: 211 LLASIISLLWVRVNPFLAKTDGPLLEECGLDCT*EM 318
Score = 177 bits (381), Expect = 5e-044
Identities = 74/87 (85%), Positives = 79/87 (90%)
Frame = -1 / -3
Query: 286 ARKGSIRTQRSEKIEASRMDQTMTIVGVLFCLPTKPLRKGYRWTITQNAKKSFPKRGPHD 107
ARKG RT RSE IEA+RMDQT+TIVGVLFCLP +PLR GYR TITQNAKKSFPKRGPHD
Sbjct: 263 ARKGFTRTHRSEMIEANRMDQTITIVGVLFCLPNRPLRNGYR*TITQNAKKSFPKRGPHD 84
Query: 106 SYPLLIALETPATTPMKFNRSKVVGGI 26
SYPLLIALE PATTPMKF+RS+VVGGI
Sbjct: 83 SYPLLIALEMPATTPMKFSRSRVVGGI 3
Score = 140 bits (301), Expect = 6e-033
Identities = 59/106 (55%), Positives = 80/106 (75%)
Frame = -3 / -2
Query: 341 HPLVAIQTTLLKKWTIILCKERVNPNPKE*ED*SQQDGPDDDNCRCPVLPPNQTFEEGIQ 162
H L A+QT LL+K + L +ERV+ +P+E +D SQQDGPDD + R PVLP QT EE +Q
Sbjct: 318 HLLGAVQTALLQKRAVGLGEERVHTHPQERDDRSQQDGPDDHDRRGPVLPSQQTLEERVQ 139
Query: 161 MDNHPKCKEELPEEGAP*LVSIIDCIGNTSDHTNEVQ*EQSGRRYQ 24
M+NHP+ +EELPEE P* +S++DC+G+ S+HT+EVQ +Q GR Q
Sbjct: 138 MNNHPEREEELPEERPP*FISVVDCVGDASNHTDEVQQKQGGRGNQ 1
Score = 116 bits (247), Expect = 2e-025
Identities = 51/104 (49%), Positives = 64/104 (61%)
Frame = -2 / -1
Query: 348 VLTSPSCNPNHTPQEVDHHPLQGKGQSEPKGVRRLKPAGWTRR*QLSVSCFASQPNL*GR 169
+++SP C+P+ TP E +GKG P G R KP GWTRR + S SC A + *G
Sbjct: 325 IISSPRCSPDRTPPEEGRRSWRGKGSHAPTGAR*SKPTGWTRRSRSSGSCSAFPTDP*GT 146
Query: 168 DTDGQSPKMQRRASRRGGPMTRIHY*LHWKHQRPHQ*SSIGAKW 37
TD QSP+ +RRASRR PM I *L W+ Q+PH+*SS A W
Sbjct: 145 GTDEQSPRTRRRASRREAPMIHIRC*LRWRCQQPHR*SSAEAGW 14
Score = 109 bits (232), Expect(2) = 9e-024
Identities = 54/105 (51%), Positives = 66/105 (62%)
Frame = +2 / +3
Query: 26 DTSYHFAPIELHWCGRWCFQCNQ*WIRVMGPPLREALLCILGDCPSVSLPQRFGWEAKQD 205
D+ H A ELH CG W Q NQ I +MG LREALL +LGDC SV +PQ +A+QD
Sbjct: 3 DSPDHPASAELHRCGCWHLQRNQQRI*IMGASLREALLRVLGDCSSVPVPQGSVGKAEQD 182
Query: 206 TDNCHRLVHPAGFNLLTPLGSD*PFPCKG*WSTS*GVWFGLQLGD 340
D+ RLVHP GF+ L P+G+ PFP + +S GV GL LGD
Sbjct: 183 PDDRDRLVHPVGFDHLAPVGACEPFPRQDRRPSSGGVRSGLHLGD 317
Score = 22.1 bits (42), Expect(2) = 9e-024
Identities = 6/8 (75%), Positives = 7/8 (87%)
Frame = +1 / +2
Query: 502 ENGGCGNP 525
+ GGCGNP
Sbjct: 518 QTGGCGNP 541
>gb|BI955734.1|BI955734 HVSMEm0024E12f Hordeum vulgare green seedling EST library
HVcDNA0014 (Blumeria infected) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEm0024E12f, mRNA sequence
Length = 707
Score = 194 bits (419), Expect(2) = 3e-055
Identities = 77/96 (80%), Positives = 82/96 (85%)
Frame = +3 / +2
Query: 3 TFKWXXXXXXXXXXXXXNFIGVVAGVSNAINNGYESWGPLFGKLFFAFWVIVHLYPFLKG 182
TFKW NFIGVVAG+SNAINNGYESWGPLFGKLFFAFWVIVHLYPFLKG
Sbjct: 143 TFKWTTLLMAATTLLLLNFIGVVAGISNAINNGYESWGPLFGKLFFAFWVIVHLYPFLKG 322
Query: 183 LVGRQNRTPTIVIVWSILLASIFSLLWVRIDPFLAK 290
L+GRQNRTPTIVIVWSILLASI SLLWVR++PFLA+
Sbjct: 323 LLGRQNRTPTIVIVWSILLASIISLLWVRVNPFLAR 430
Score = 190 bits (410), Expect = 5e-048
Identities = 80/95 (84%), Positives = 85/95 (89%)
Frame = -1 / -3
Query: 286 ARKGSIRTQRSEKIEASRMDQTMTIVGVLFCLPTKPLRKGYRWTITQNAKKSFPKRGPHD 107
ARKG RT RSE IEA+RMDQT+TIVGVLFCLP +PLR GYR TITQNAKKSFPKRGPHD
Sbjct: 426 ARKGFTRTHRSEMIEANRMDQTITIVGVLFCLPNRPLRNGYR*TITQNAKKSFPKRGPHD 247
Query: 106 SYPLLIALETPATTPMKFNRSKVVGGINKVVHLNV 2
SYPLLIALE PATTPMKF+RS+VV INKVVHLNV
Sbjct: 246 SYPLLIALEMPATTPMKFSRSRVVAAINKVVHLNV 142
Score = 141 bits (302), Expect = 4e-033
Identities = 55/94 (58%), Positives = 75/94 (79%)
Frame = -3 / -2
Query: 284 KERVNPNPKE*ED*SQQDGPDDDNCRCPVLPPNQTFEEGIQMDNHPKCKEELPEEGAP*L 105
+ERV+ +P+E +D SQQDGPDD + R PVLP QT EE +QM+NHP+ +EELPEE P*
Sbjct: 424 EERVHTHPQERDDRSQQDGPDDHDRRGPVLPSQQTLEERVQMNNHPEREEELPEERPP*F 245
Query: 104 VSIIDCIGNTSDHTNEVQ*EQSGRRYQ*GSPFKC 3
+S++DC+G+ S+HT+EVQ +Q GRR+Q G PF+C
Sbjct: 244 ISVVDCVGDASNHTDEVQQKQGGRRHQQGCPFEC 143
Score = 109 bits (233), Expect = 1e-023
Identities = 51/94 (54%), Positives = 61/94 (64%)
Frame = +2 / +1
Query: 2 HI*MDYLIDTSYHFAPIELHWCGRWCFQCNQ*WIRVMGPPLREALLCILGDCPSVSLPQR 181
HI MD L+D H A ELH CG W Q NQ I +MG LREALL +LGDC SV +PQ
Sbjct: 142 HIQMDNLVDGGDHPASAELHRCGCWHLQRNQQRI*IMGASLREALLRVLGDCSSVPVPQG 321
Query: 182 FGWEAKQDTDNCHRLVHPAGFNLLTPLGSD*PFP 283
+A+QD D+ RLVHP GF+ L P+G+ PFP
Sbjct: 322 SVGKAEQDPDDRDRLVHPVGFDHLAPVGACEPFP 423
Score = 105 bits (223), Expect = 3e-022
Identities = 51/95 (53%), Positives = 59/95 (62%)
Frame = -2 / -1
Query: 285 QGKGQSEPKGVRRLKPAGWTRR*QLSVSCFASQPNL*GRDTDGQSPKMQRRASRRGGPMT 106
+GKG P G R KP GWTRR + S SC A + *G TD QSP+ +RRASRR PM
Sbjct: 425 RGKGSHAPTGAR*SKPTGWTRRSRSSGSCSAFPTDP*GTGTDEQSPRTRRRASRREAPMI 246
Query: 105 RIHY*LHWKHQRPHQ*SSIGAKW*EVSIR*SI*MC 1
I *L W+ Q+PH+*SS A W S R SI*MC
Sbjct: 245 HIRC*LRWRCQQPHR*SSAEAGWSPPSTRLSI*MC 141
Score = 40.5 bits (82), Expect(2) = 3e-055
Identities = 14/19 (73%), Positives = 16/19 (84%)
Frame = +3 / +1
Query: 273 DPFLAKDDGPLLEECGLDC 329
+PF + DGPLLEECGLDC
Sbjct: 412 EPFPRQTDGPLLEECGLDC 468
>gb|AV928513.1|AV928513 AV928513 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp.
vulgare cDNA clone basdl12 3', mRNA sequence
Length = 661
Score = 201 bits (434), Expect = 3e-051
Identities = 75/108 (69%), Positives = 89/108 (82%)
Frame = +3 / -1
Query: 6 FKWXXXXXXXXXXXXXNFIGVVAGVSNAINNGYESWGPLFGKLFFAFWVIVHLYPFLKGL 185
FKW N +G+VAGVS+A+NNGY SWGPLFGKLFF+FWVIVHLYPFLKGL
Sbjct: 493 FKWTTLLIPPTTLIIINMVGIVAGVSDAVNNGYGSWGPLFGKLFFSFWVIVHLYPFLKGL 314
Query: 186 VGRQNRTPTIVIVWSILLASIFSLLWVRIDPFLAKDDGPLLEECGLDC 329
+GRQNRTPTIV++WS+LLASIFSL+WVRIDPF+AK GP+L+ CG+ C
Sbjct: 313 MGRQNRTPTIVVLWSVLLASIFSLVWVRIDPFIAKPKGPILKPCGVQC 170
Score = 138 bits (295), Expect = 4e-032
Identities = 59/93 (63%), Positives = 66/93 (70%)
Frame = -1 / +3
Query: 286 ARKGSIRTQRSEKIEASRMDQTMTIVGVLFCLPTKPLRKGYRWTITQNAKKSFPKRGPHD 107
A KGSI T EK+EASR DQ+ T+VGV FCLP PLR G RWT+TQ KKSFPK GP D
Sbjct: 213 AMKGSILTHTREKMEASRTDQSTTMVGVRFCLPMSPLRNG*RWTMTQKEKKSFPKSGPQD 392
Query: 106 SYPLLIALETPATTPMKFNRSKVVGGINKVVHL 8
YPLL A +TPAT P VVGGI++VVHL
Sbjct: 393 PYPLLTASDTPATMPTMLIMMSVVGGISRVVHL 491
>gb|BI960696.1|BI960696 HVSMEn0025O11f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0025O11f, mRNA sequence
Length = 658
Score = 200 bits (431), Expect = 7e-051
Identities = 76/108 (70%), Positives = 88/108 (81%)
Frame = +3 / -2
Query: 6 FKWXXXXXXXXXXXXXNFIGVVAGVSNAINNGYESWGPLFGKLFFAFWVIVHLYPFLKGL 185
FKW N IGVVAG+S+AINNGY+SWGPLFGKLFFAFWVIVHLYPFLKG
Sbjct: 492 FKWTTLLIPQTTLLVINIIGVVAGISDAINNGYQSWGPLFGKLFFAFWVIVHLYPFLKGF 313
Query: 186 VGRQNRTPTIVIVWSILLASIFSLLWVRIDPFLAKDDGPLLEECGLDC 329
+GRQNRTPTIVI+WS+LLAS+FSLLWVRIDPF K GP +++CG++C
Sbjct: 312 MGRQNRTPTIVIIWSVLLASMFSLLWVRIDPFTVKAKGPDVKQCGINC 169
Score = 134 bits (288), Expect = 4e-031
Identities = 60/91 (65%), Positives = 65/91 (71%)
Frame = -1 / +2
Query: 280 KGSIRTQRSEKIEASRMDQTMTIVGVLFCLPTKPLRKGYRWTITQNAKKSFPKRGPHDSY 101
KGSI TQ E +EAS D MT+VGVLFCLP KPLR G R TITQ AKKS P GPHD Y
Sbjct: 218 KGSILTQSRENMEASSTDHMMTMVGVLFCLPMKPLRNG*RCTITQKAKKSLPNSGPHDWY 397
Query: 100 PLLIALETPATTPMKFNRSKVVGGINKVVHL 8
PLL+A E PATTPM S VV G+ +VVHL
Sbjct: 398 PLLMASEMPATTPMMLITSSVV*GMRRVVHL 490
>gb|BI958555.1|BI958555 HVSMEn0015J16f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0015J16f, mRNA sequence
Length = 631
Score = 198 bits (427), Expect = 2e-050
Identities = 74/108 (68%), Positives = 88/108 (81%)
Frame = +3 / -1
Query: 6 FKWXXXXXXXXXXXXXNFIGVVAGVSNAINNGYESWGPLFGKLFFAFWVIVHLYPFLKGL 185
FKW N +G+VAGVS+A+NNGY SWGPLFGKLFF+ WVIVHLYPFLKGL
Sbjct: 538 FKWTTLLIPPTTLIIINMVGIVAGVSDAVNNGYGSWGPLFGKLFFSXWVIVHLYPFLKGL 359
Query: 186 VGRQNRTPTIVIVWSILLASIFSLLWVRIDPFLAKDDGPLLEECGLDC 329
+GRQNRTPTIV++WS+LLASIFSL+WVRIDPF+AK GP+L+ CG+ C
Sbjct: 358 MGRQNRTPTIVVLWSVLLASIFSLVWVRIDPFIAKPKGPILKPCGVQC 215
Score = 135 bits (289), Expect = 3e-031
Identities = 58/93 (62%), Positives = 65/93 (69%)
Frame = -1 / +3
Query: 286 ARKGSIRTQRSEKIEASRMDQTMTIVGVLFCLPTKPLRKGYRWTITQNAKKSFPKRGPHD 107
A KGSI T EK+EASR DQ+ T+VGV FCLP PLR G RWT+T KKSFPK GP D
Sbjct: 258 AMKGSILTHTREKMEASRTDQSTTMVGVRFCLPMSPLRNG*RWTMTXKEKKSFPKSGPQD 437
Query: 106 SYPLLIALETPATTPMKFNRSKVVGGINKVVHL 8
YPLL A +TPAT P VVGGI++VVHL
Sbjct: 438 PYPLLTASDTPATMPTMLIMMSVVGGISRVVHL 536
>gb|AV913278.1|AV913278 AV913278 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags21i04 5', mRNA sequence
Length = 604
Score = 193 bits (416), Expect(2) = 8e-050
Identities = 74/108 (68%), Positives = 86/108 (79%)
Frame = +3 / +3
Query: 6 FKWXXXXXXXXXXXXXNFIGVVAGVSNAINNGYESWGPLFGKLFFAFWVIVHLYPFLKGL 185
FKW N +GVVAG S AIN+GY+SWGPLFGKLFFAFWVIVHLYPFLKGL
Sbjct: 174 FKWTTLLIPPTTILIINMVGVVAGTSYAINSGYQSWGPLFGKLFFAFWVIVHLYPFLKGL 353
Query: 186 VGRQNRTPTIVIVWSILLASIFSLLWVRIDPFLAKDDGPLLEECGLDC 329
+GRQNRTPTIVIVW++LLASIFSLLWVR+DPF + GP ++ CG++C
Sbjct: 354 MGRQNRTPTIVIVWAVLLASIFSLLWVRVDPFTTRLAGPNIQTCGINC 497
Score = 136 bits (292), Expect = 1e-031
Identities = 61/92 (66%), Positives = 66/92 (71%)
Frame = -1 / -1
Query: 277 GSIRTQRSEKIEASRMDQTMTIVGVLFCLPTKPLRKGYRWTITQNAKKSFPKRGPHDSYP 98
GS RT EKIEA R QTMTIVGV FCLP +PLRKGY+ TITQ AKKSFPK GP D P
Sbjct: 445 GSTRTHSKEKIEARRTAQTMTIVGVRFCLPIRPLRKGYK*TITQKAKKSFPKSGPQDW*P 266
Query: 97 LLIALETPATTPMKFNRSKVVGGINKVVHLNV 2
LL+A E PATTP VVGG+ VVHLN+
Sbjct: 265 LLMA*EVPATTPTMLMIKMVVGGMRSVVHLNM 170
Score = 120 bits (256), Expect = 9e-027
Identities = 50/101 (49%), Positives = 68/101 (67%)
Frame = -3 / -3
Query: 332 VAIQTTLLKKWTIILCKERVNPNPKE*ED*SQQDGPDDDNCRCPVLPPNQTFEEGIQMDN 153
+A+ T L W C E +N NP++ ED*SQ+D PDDDN RC VLP ++T EEG+ ++N
Sbjct: 500 LAVDATGLDIWASETCSEWINTNPQQGED*SQEDSPDDDNRRCAVLPAHKTLEEGV*VNN 321
Query: 152 HPKCKEELPEEGAP*LVSIIDCIGNTSDHTNEVQ*EQSGRR 30
HP+ KEELPEE P LV+ +D +G TS+ T+ V + RR
Sbjct: 320 HPEGKEELPEERPPRLVTTVDGVGGTSNDTDHVNDQDGRRR 198
Score = 25.4 bits (49), Expect(2) = 8e-050
Identities = 7/13 (53%), Positives = 9/13 (69%)
Frame = +3 / +2
Query: 477 PNIWDTLEGKWRL 515
PN+W L GKW +
Sbjct: 476 PNLWHQLLGKWEI 514
>gb|AV930365.1|AV930365 AV930365 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp.
vulgare cDNA clone basd22e04 3', mRNA sequence
Length = 604
Score = 193 bits (416), Expect(2) = 8e-050
Identities = 74/108 (68%), Positives = 86/108 (79%)
Frame = +3 / -2
Query: 6 FKWXXXXXXXXXXXXXNFIGVVAGVSNAINNGYESWGPLFGKLFFAFWVIVHLYPFLKGL 185
FKW N +GVVAG S AIN+GY+SWGPLFGKLFFAFWVIVHLYPFLKGL
Sbjct: 504 FKWTTLLIPPTTILIINMVGVVAGTSYAINSGYQSWGPLFGKLFFAFWVIVHLYPFLKGL 325
Query: 186 VGRQNRTPTIVIVWSILLASIFSLLWVRIDPFLAKDDGPLLEECGLDC 329
+GRQNRTPTIVIVW++LLASIFSLLWVR+DPF + GP ++ CG++C
Sbjct: 324 MGRQNRTPTIVIVWAVLLASIFSLLWVRVDPFTTRLAGPNIQTCGINC 181
Score = 136 bits (292), Expect = 1e-031
Identities = 61/92 (66%), Positives = 66/92 (71%)
Frame = -1 / +2
Query: 277 GSIRTQRSEKIEASRMDQTMTIVGVLFCLPTKPLRKGYRWTITQNAKKSFPKRGPHDSYP 98
GS RT EKIEA R QTMTIVGV FCLP +PLRKGY+ TITQ AKKSFPK GP D P
Sbjct: 233 GSTRTHSKEKIEARRTAQTMTIVGVRFCLPIRPLRKGYK*TITQKAKKSFPKSGPQDW*P 412
Query: 97 LLIALETPATTPMKFNRSKVVGGINKVVHLNV 2
LL+A E PATTP VVGG+ VVHLN+
Sbjct: 413 LLMA*EVPATTPTMLMIKMVVGGMRSVVHLNM 508
Score = 120 bits (256), Expect = 9e-027
Identities = 50/101 (49%), Positives = 68/101 (67%)
Frame = -3 / +1
Query: 332 VAIQTTLLKKWTIILCKERVNPNPKE*ED*SQQDGPDDDNCRCPVLPPNQTFEEGIQMDN 153
+A+ T L W C E +N NP++ ED*SQ+D PDDDN RC VLP ++T EEG+ ++N
Sbjct: 178 LAVDATGLDIWASETCSEWINTNPQQGED*SQEDSPDDDNRRCAVLPAHKTLEEGV*VNN 357
Query: 152 HPKCKEELPEEGAP*LVSIIDCIGNTSDHTNEVQ*EQSGRR 30
HP+ KEELPEE P LV+ +D +G TS+ T+ V + RR
Sbjct: 358 HPEGKEELPEERPPRLVTTVDGVGGTSNDTDHVNDQDGRRR 480
Score = 25.4 bits (49), Expect(2) = 8e-050
Identities = 7/13 (53%), Positives = 9/13 (69%)
Frame = +3 / -1
Query: 477 PNIWDTLEGKWRL 515
PN+W L GKW +
Sbjct: 202 PNLWHQLLGKWEI 164
>gb|BU990492.1|BU990492 HF25D10r HF Hordeum vulgare subsp. vulgare cDNA clone HF25D10
5-PRIME, mRNA sequence
Length = 621
Score = 193 bits (416), Expect(2) = 8e-050
Identities = 74/108 (68%), Positives = 86/108 (79%)
Frame = +3 / +3
Query: 6 FKWXXXXXXXXXXXXXNFIGVVAGVSNAINNGYESWGPLFGKLFFAFWVIVHLYPFLKGL 185
FKW N +GVVAG S AIN+GY+SWGPLFGKLFFAFWVIVHLYPFLKGL
Sbjct: 195 FKWTTLLIPPTTILIINMVGVVAGTSYAINSGYQSWGPLFGKLFFAFWVIVHLYPFLKGL 374
Query: 186 VGRQNRTPTIVIVWSILLASIFSLLWVRIDPFLAKDDGPLLEECGLDC 329
+GRQNRTPTIVIVW++LLASIFSLLWVR+DPF + GP ++ CG++C
Sbjct: 375 MGRQNRTPTIVIVWAVLLASIFSLLWVRVDPFTTRLAGPNIQTCGINC 518
Score = 136 bits (292), Expect = 1e-031
Identities = 61/92 (66%), Positives = 66/92 (71%)
Frame = -1 / -3
Query: 277 GSIRTQRSEKIEASRMDQTMTIVGVLFCLPTKPLRKGYRWTITQNAKKSFPKRGPHDSYP 98
GS RT EKIEA R QTMTIVGV FCLP +PLRKGY+ TITQ AKKSFPK GP D P
Sbjct: 466 GSTRTHSKEKIEARRTAQTMTIVGVRFCLPIRPLRKGYK*TITQKAKKSFPKSGPQDW*P 287
Query: 97 LLIALETPATTPMKFNRSKVVGGINKVVHLNV 2
LL+A E PATTP VVGG+ VVHLN+
Sbjct: 286 LLMA*EVPATTPTMLMIKMVVGGMRSVVHLNM 191
Score = 120 bits (256), Expect = 9e-027
Identities = 50/101 (49%), Positives = 68/101 (67%)
Frame = -3 / -2
Query: 332 VAIQTTLLKKWTIILCKERVNPNPKE*ED*SQQDGPDDDNCRCPVLPPNQTFEEGIQMDN 153
+A+ T L W C E +N NP++ ED*SQ+D PDDDN RC VLP ++T EEG+ ++N
Sbjct: 521 LAVDATGLDIWASETCSEWINTNPQQGED*SQEDSPDDDNRRCAVLPAHKTLEEGV*VNN 342
Query: 152 HPKCKEELPEEGAP*LVSIIDCIGNTSDHTNEVQ*EQSGRR 30
HP+ KEELPEE P LV+ +D +G TS+ T+ V + RR
Sbjct: 341 HPEGKEELPEERPPRLVTTVDGVGGTSNDTDHVNDQDGRRR 219
Score = 25.4 bits (49), Expect(2) = 8e-050
Identities = 7/13 (53%), Positives = 9/13 (69%)
Frame = +3 / +2
Query: 477 PNIWDTLEGKWRL 515
PN+W L GKW +
Sbjct: 497 PNLWHQLLGKWEI 535
>gb|BQ465284.1|BQ465284 HU03C22r HU Hordeum vulgare subsp. vulgare cDNA clone HU03C22
5-PRIME, mRNA sequence
Length = 643
Score = 193 bits (416), Expect(2) = 8e-050
Identities = 74/108 (68%), Positives = 86/108 (79%)
Frame = +3 / +2
Query: 6 FKWXXXXXXXXXXXXXNFIGVVAGVSNAINNGYESWGPLFGKLFFAFWVIVHLYPFLKGL 185
FKW N +GVVAG S AIN+GY+SWGPLFGKLFFAFWVIVHLYPFLKGL
Sbjct: 173 FKWTTLLIPPTTILIINMVGVVAGTSYAINSGYQSWGPLFGKLFFAFWVIVHLYPFLKGL 352
Query: 186 VGRQNRTPTIVIVWSILLASIFSLLWVRIDPFLAKDDGPLLEECGLDC 329
+GRQNRTPTIVIVW++LLASIFSLLWVR+DPF + GP ++ CG++C
Sbjct: 353 MGRQNRTPTIVIVWAVLLASIFSLLWVRVDPFTTRLAGPNIQTCGINC 496
Score = 136 bits (292), Expect = 1e-031
Identities = 61/92 (66%), Positives = 66/92 (71%)
Frame = -1 / -2
Query: 277 GSIRTQRSEKIEASRMDQTMTIVGVLFCLPTKPLRKGYRWTITQNAKKSFPKRGPHDSYP 98
GS RT EKIEA R QTMTIVGV FCLP +PLRKGY+ TITQ AKKSFPK GP D P
Sbjct: 444 GSTRTHSKEKIEARRTAQTMTIVGVRFCLPIRPLRKGYK*TITQKAKKSFPKSGPQDW*P 265
Query: 97 LLIALETPATTPMKFNRSKVVGGINKVVHLNV 2
LL+A E PATTP VVGG+ VVHLN+
Sbjct: 264 LLMA*EVPATTPTMLMIKMVVGGMRSVVHLNM 169
Score = 120 bits (256), Expect = 9e-027
Identities = 50/101 (49%), Positives = 68/101 (67%)
Frame = -3 / -1
Query: 332 VAIQTTLLKKWTIILCKERVNPNPKE*ED*SQQDGPDDDNCRCPVLPPNQTFEEGIQMDN 153
+A+ T L W C E +N NP++ ED*SQ+D PDDDN RC VLP ++T EEG+ ++N
Sbjct: 499 LAVDATGLDIWASETCSEWINTNPQQGED*SQEDSPDDDNRRCAVLPAHKTLEEGV*VNN 320
Query: 152 HPKCKEELPEEGAP*LVSIIDCIGNTSDHTNEVQ*EQSGRR 30
HP+ KEELPEE P LV+ +D +G TS+ T+ V + RR
Sbjct: 319 HPEGKEELPEERPPRLVTTVDGVGGTSNDTDHVNDQDGRRR 197
Score = 25.4 bits (49), Expect(2) = 8e-050
Identities = 7/13 (53%), Positives = 9/13 (69%)
Frame = +3 / +1
Query: 477 PNIWDTLEGKWRL 515
PN+W L GKW +
Sbjct: 475 PNLWHQLLGKWEI 513
>gb|AV918572.1|AV918572 AV918572 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags21i04 3', mRNA sequence
Length = 649
Score = 193 bits (416), Expect(2) = 8e-050
Identities = 74/108 (68%), Positives = 86/108 (79%)
Frame = +3 / -3
Query: 6 FKWXXXXXXXXXXXXXNFIGVVAGVSNAINNGYESWGPLFGKLFFAFWVIVHLYPFLKGL 185
FKW N +GVVAG S AIN+GY+SWGPLFGKLFFAFWVIVHLYPFLKGL
Sbjct: 581 FKWTTLLIPPTTILIINMVGVVAGTSYAINSGYQSWGPLFGKLFFAFWVIVHLYPFLKGL 402
Query: 186 VGRQNRTPTIVIVWSILLASIFSLLWVRIDPFLAKDDGPLLEECGLDC 329
+GRQNRTPTIVIVW++LLASIFSLLWVR+DPF + GP ++ CG++C
Sbjct: 401 MGRQNRTPTIVIVWAVLLASIFSLLWVRVDPFTTRLAGPNIQTCGINC 258
Score = 136 bits (292), Expect = 1e-031
Identities = 61/92 (66%), Positives = 66/92 (71%)
Frame = -1 / +1
Query: 277 GSIRTQRSEKIEASRMDQTMTIVGVLFCLPTKPLRKGYRWTITQNAKKSFPKRGPHDSYP 98
GS RT EKIEA R QTMTIVGV FCLP +PLRKGY+ TITQ AKKSFPK GP D P
Sbjct: 310 GSTRTHSKEKIEARRTAQTMTIVGVRFCLPIRPLRKGYK*TITQKAKKSFPKSGPQDW*P 489
Query: 97 LLIALETPATTPMKFNRSKVVGGINKVVHLNV 2
LL+A E PATTP VVGG+ VVHLN+
Sbjct: 490 LLMA*EVPATTPTMLMIKMVVGGMRSVVHLNM 585
Score = 120 bits (256), Expect = 9e-027
Identities = 50/101 (49%), Positives = 68/101 (67%)
Frame = -3 / +3
Query: 332 VAIQTTLLKKWTIILCKERVNPNPKE*ED*SQQDGPDDDNCRCPVLPPNQTFEEGIQMDN 153
+A+ T L W C E +N NP++ ED*SQ+D PDDDN RC VLP ++T EEG+ ++N
Sbjct: 255 LAVDATGLDIWASETCSEWINTNPQQGED*SQEDSPDDDNRRCAVLPAHKTLEEGV*VNN 434
Query: 152 HPKCKEELPEEGAP*LVSIIDCIGNTSDHTNEVQ*EQSGRR 30
HP+ KEELPEE P LV+ +D +G TS+ T+ V + RR
Sbjct: 435 HPEGKEELPEERPPRLVTTVDGVGGTSNDTDHVNDQDGRRR 557
Score = 25.4 bits (49), Expect(2) = 8e-050
Identities = 7/13 (53%), Positives = 9/13 (69%)
Frame = +3 / -2
Query: 477 PNIWDTLEGKWRL 515
PN+W L GKW +
Sbjct: 279 PNLWHQLLGKWEI 241
>gb|BI959339.1|BI959339 HVSMEn0019E20f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0019E20f, mRNA sequence
Length = 681
Score = 193 bits (416), Expect(2) = 9e-050
Identities = 74/108 (68%), Positives = 86/108 (79%)
Frame = +3 / -2
Query: 6 FKWXXXXXXXXXXXXXNFIGVVAGVSNAINNGYESWGPLFGKLFFAFWVIVHLYPFLKGL 185
FKW N +GVVAG S AIN+GY+SWGPLFGKLFFAFWVIVHLYPFLKGL
Sbjct: 659 FKWTTLLIPPTTILIINMVGVVAGTSYAINSGYQSWGPLFGKLFFAFWVIVHLYPFLKGL 480
Query: 186 VGRQNRTPTIVIVWSILLASIFSLLWVRIDPFLAKDDGPLLEECGLDC 329
+GRQNRTPTIVIVW++LLASIFSLLWVR+DPF + GP ++ CG++C
Sbjct: 479 MGRQNRTPTIVIVWAVLLASIFSLLWVRVDPFTTRLAGPNIQTCGINC 336
Score = 136 bits (292), Expect = 1e-031
Identities = 61/92 (66%), Positives = 66/92 (71%)
Frame = -1 / +1
Query: 277 GSIRTQRSEKIEASRMDQTMTIVGVLFCLPTKPLRKGYRWTITQNAKKSFPKRGPHDSYP 98
GS RT EKIEA R QTMTIVGV FCLP +PLRKGY+ TITQ AKKSFPK GP D P
Sbjct: 388 GSTRTHSKEKIEARRTAQTMTIVGVRFCLPIRPLRKGYK*TITQKAKKSFPKSGPQDW*P 567
Query: 97 LLIALETPATTPMKFNRSKVVGGINKVVHLNV 2
LL+A E PATTP VVGG+ VVHLN+
Sbjct: 568 LLMA*EVPATTPTMLMIKMVVGGMRSVVHLNM 663
Score = 120 bits (256), Expect = 9e-027
Identities = 50/101 (49%), Positives = 68/101 (67%)
Frame = -3 / +3
Query: 332 VAIQTTLLKKWTIILCKERVNPNPKE*ED*SQQDGPDDDNCRCPVLPPNQTFEEGIQMDN 153
+A+ T L W C E +N NP++ ED*SQ+D PDDDN RC VLP ++T EEG+ ++N
Sbjct: 333 LAVDATGLDIWASETCSEWINTNPQQGED*SQEDSPDDDNRRCAVLPAHKTLEEGV*VNN 512
Query: 152 HPKCKEELPEEGAP*LVSIIDCIGNTSDHTNEVQ*EQSGRR 30
HP+ KEELPEE P LV+ +D +G TS+ T+ V + RR
Sbjct: 513 HPEGKEELPEERPPRLVTTVDGVGGTSNDTDHVNDQDGRRR 635
Score = 25.4 bits (49), Expect(2) = 9e-050
Identities = 7/13 (53%), Positives = 9/13 (69%)
Frame = +3 / -1
Query: 477 PNIWDTLEGKWRL 515
PN+W L GKW +
Sbjct: 357 PNLWHQLLGKWEI 319
>gb|CA025840.1|CA025840 HZ53E19r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ53E19
5-PRIME, mRNA sequence
Length = 456
Score = 196 bits (422), Expect = 1e-049
Identities = 82/95 (86%), Positives = 87/95 (91%)
Frame = -1 / -3
Query: 286 ARKGSIRTQRSEKIEASRMDQTMTIVGVLFCLPTKPLRKGYRWTITQNAKKSFPKRGPHD 107
ARKG RT RSE IEA+RMDQT+TIVGVLFCLP +PLR GYR TITQNAKKSFPKRGPHD
Sbjct: 448 ARKGFTRTHRSEMIEANRMDQTITIVGVLFCLPNRPLRNGYR*TITQNAKKSFPKRGPHD 269
Query: 106 SYPLLIALETPATTPMKFNRSKVVGGINKVVHLNV 2
SYPLLIALE PATTPMKF+RS+VVGGINKVVHLNV
Sbjct: 268 SYPLLIALEMPATTPMKFSRSRVVGGINKVVHLNV 164
Score = 194 bits (418), Expect = 4e-049
Identities = 78/96 (81%), Positives = 82/96 (85%)
Frame = +3 / +3
Query: 3 TFKWXXXXXXXXXXXXXNFIGVVAGVSNAINNGYESWGPLFGKLFFAFWVIVHLYPFLKG 182
TFKW NFIGVVAG+SNAINNGYESWGPLFGKLFFAFWVIVHLYPFLKG
Sbjct: 165 TFKWTTLLIPPTTLLLLNFIGVVAGISNAINNGYESWGPLFGKLFFAFWVIVHLYPFLKG 344
Query: 183 LVGRQNRTPTIVIVWSILLASIFSLLWVRIDPFLAK 290
L+GRQNRTPTIVIVWSILLASI SLLWVR++PFLAK
Sbjct: 345 LLGRQNRTPTIVIVWSILLASIISLLWVRVNPFLAK 452
Score = 136 bits (292), Expect = 1e-031
Identities = 55/96 (57%), Positives = 74/96 (77%)
Frame = -3 / -2
Query: 290 LCKERVNPNPKE*ED*SQQDGPDDDNCRCPVLPPNQTFEEGIQMDNHPKCKEELPEEGAP 111
L +ERV+ +P+E +D SQQDGPDD + R PVLP QT EE +QM+NHP+ +EELPEE P
Sbjct: 452 LGEERVHTHPQERDDRSQQDGPDDHDRRGPVLPSQQTLEERVQMNNHPEREEELPEERPP 273
Query: 110 *LVSIIDCIGNTSDHTNEVQ*EQSGRRYQ*GSPFKC 3
* +S++DC+G+ S+HT+EVQ +Q GR Q G PF+C
Sbjct: 272 *FISVVDCVGDASNHTDEVQQKQGGRGNQQGCPFEC 165
Score = 107 bits (229), Expect = 5e-023
Identities = 50/94 (53%), Positives = 62/94 (65%)
Frame = +2 / +2
Query: 2 HI*MDYLIDTSYHFAPIELHWCGRWCFQCNQ*WIRVMGPPLREALLCILGDCPSVSLPQR 181
+I MD L+D+ H A ELH CG W Q NQ I +MG LREALL +LGDC SV +PQ
Sbjct: 164 YIQMDNLVDSPDHPASAELHRCGCWHLQRNQQRI*IMGASLREALLRVLGDCSSVPVPQG 343
Query: 182 FGWEAKQDTDNCHRLVHPAGFNLLTPLGSD*PFP 283
+A+QD D+ RLVHP GF+ L P+G+ PFP
Sbjct: 344 SVGKAEQDPDDRDRLVHPVGFDHLAPVGACEPFP 445
Score = 100 bits (213), Expect = 8e-021
Identities = 50/94 (53%), Positives = 58/94 (61%)
Frame = -2 / -1
Query: 285 QGKGQSEPKGVRRLKPAGWTRR*QLSVSCFASQPNL*GRDTDGQSPKMQRRASRRGGPMT 106
+GKG P G R KP GWTRR + S SC A + *G TD QSP+ +RRASRR PM
Sbjct: 447 RGKGSHAPTGAR*SKPTGWTRRSRSSGSCSAFPTDP*GTGTDEQSPRTRRRASRREAPMI 268
Query: 105 RIHY*LHWKHQRPHQ*SSIGAKW*EVSIR*SI*M 4
I *L W+ Q+PH+*SS A W S R SI*M
Sbjct: 267 HIRC*LRWRCQQPHR*SSAEAGWSGESTRLSI*M 166
>gb|BQ660846.1|BQ660846 HI05L24u HI Hordeum vulgare subsp. vulgare cDNA clone HI05L24
3-PRIME, mRNA sequence
Length = 539
Score = 191 bits (412), Expect(2) = 2e-049
Identities = 73/108 (67%), Positives = 85/108 (78%)
Frame = +3 / -3
Query: 6 FKWXXXXXXXXXXXXXNFIGVVAGVSNAINNGYESWGPLFGKLFFAFWVIVHLYPFLKGL 185
FKW N +GVVAG S AIN+GY+SWGPLFGKLFFAFWVIVHLYPFLKG
Sbjct: 495 FKWTTLFIPPTTILIINMVGVVAGTSYAINSGYQSWGPLFGKLFFAFWVIVHLYPFLKGF 316
Query: 186 VGRQNRTPTIVIVWSILLASIFSLLWVRIDPFLAKDDGPLLEECGLDC 329
+GRQNRTPTIVIVW++LLASIFSLLWVR+DPF + GP ++ CG++C
Sbjct: 315 MGRQNRTPTIVIVWAVLLASIFSLLWVRVDPFTTRLAGPNIQTCGINC 172
Score = 138 bits (295), Expect = 4e-032
Identities = 62/92 (67%), Positives = 66/92 (71%)
Frame = -1 / +2
Query: 277 GSIRTQRSEKIEASRMDQTMTIVGVLFCLPTKPLRKGYRWTITQNAKKSFPKRGPHDSYP 98
GS RT EKIEA R QTMTIVGV FCLP KPLRKGY+ TITQ AKKSFPK GP D P
Sbjct: 224 GSTRTHSKEKIEARRTAQTMTIVGVRFCLPIKPLRKGYK*TITQKAKKSFPKSGPQDW*P 403
Query: 97 LLIALETPATTPMKFNRSKVVGGINKVVHLNV 2
LL+A E PATTP VVGG+ VVHLN+
Sbjct: 404 LLMA*EVPATTPTMLMIKMVVGGMKSVVHLNM 499
Score = 120 bits (256), Expect = 9e-027
Identities = 50/101 (49%), Positives = 68/101 (67%)
Frame = -3 / +1
Query: 332 VAIQTTLLKKWTIILCKERVNPNPKE*ED*SQQDGPDDDNCRCPVLPPNQTFEEGIQMDN 153
+A+ T L W C E +N NP++ ED*SQ+D PDDDN RC VLP ++T EEG+ ++N
Sbjct: 169 LAVDATGLDIWASETCSEWINTNPQQGED*SQEDSPDDDNRRCAVLPAHKTLEEGV*VNN 348
Query: 152 HPKCKEELPEEGAP*LVSIIDCIGNTSDHTNEVQ*EQSGRR 30
HP+ KEELPEE P LV+ +D +G TS+ T+ V + RR
Sbjct: 349 HPEGKEELPEERPPRLVTTVDGVGGTSNDTDHVNDQDGRRR 471
Score = 25.4 bits (49), Expect(2) = 2e-049
Identities = 7/13 (53%), Positives = 9/13 (69%)
Frame = +3 / -2
Query: 477 PNIWDTLEGKWRL 515
PN+W L GKW +
Sbjct: 193 PNLWHQLLGKWEI 155
>gb|BU971759.1|BU971759 HB19J12r BC Hordeum vulgare subsp. vulgare cDNA clone HB19J12
5-PRIME, mRNA sequence
Length = 649
Score = 194 bits (418), Expect = 4e-049
Identities = 81/94 (86%), Positives = 86/94 (91%)
Frame = -1 / -3
Query: 283 RKGSIRTQRSEKIEASRMDQTMTIVGVLFCLPTKPLRKGYRWTITQNAKKSFPKRGPHDS 104
RKG RT RSE IEA+RMDQT+TIVGVLFCLP +PLR GYR TITQNAKKSFPKRGPHDS
Sbjct: 647 RKGFTRTHRSEMIEANRMDQTITIVGVLFCLPNRPLRNGYR*TITQNAKKSFPKRGPHDS 468
Query: 103 YPLLIALETPATTPMKFNRSKVVGGINKVVHLNV 2
YPLLIALE PATTPMKF+RS+VVGGINKVVHLNV
Sbjct: 467 YPLLIALEMPATTPMKFSRSRVVGGINKVVHLNV 366
Score = 190 bits (409), Expect = 7e-048
Identities = 76/94 (80%), Positives = 80/94 (85%)
Frame = +3 / +1
Query: 3 TFKWXXXXXXXXXXXXXNFIGVVAGVSNAINNGYESWGPLFGKLFFAFWVIVHLYPFLKG 182
TFKW NFIGVVAG+SNAINNGYESWGPLFGKLFFAFWVIVHLYPFLKG
Sbjct: 367 TFKWTTLLIPPTTLLLLNFIGVVAGISNAINNGYESWGPLFGKLFFAFWVIVHLYPFLKG 546
Query: 183 LVGRQNRTPTIVIVWSILLASIFSLLWVRIDPFL 284
L+GRQNRTPTIVIVWSILLASI SLLWVR++PFL
Sbjct: 547 LLGRQNRTPTIVIVWSILLASIISLLWVRVNPFL 648
Score = 136 bits (291), Expect = 1e-031
Identities = 54/94 (57%), Positives = 73/94 (77%)
Frame = -3 / -2
Query: 284 KERVNPNPKE*ED*SQQDGPDDDNCRCPVLPPNQTFEEGIQMDNHPKCKEELPEEGAP*L 105
+ERV+ +P+E +D SQQDGPDD + R PVLP QT EE +QM+NHP+ +EELPEE P*
Sbjct: 648 EERVHTHPQERDDRSQQDGPDDHDRRGPVLPSQQTLEERVQMNNHPEREEELPEERPP*F 469
Query: 104 VSIIDCIGNTSDHTNEVQ*EQSGRRYQ*GSPFKC 3
+S++DC+G+ S+HT+EVQ +Q GR Q G PF+C
Sbjct: 468 ISVVDCVGDASNHTDEVQQKQGGRGNQQGCPFEC 367
Score = 107 bits (229), Expect = 5e-023
Identities = 50/94 (53%), Positives = 62/94 (65%)
Frame = +2 / +3
Query: 2 HI*MDYLIDTSYHFAPIELHWCGRWCFQCNQ*WIRVMGPPLREALLCILGDCPSVSLPQR 181
+I MD L+D+ H A ELH CG W Q NQ I +MG LREALL +LGDC SV +PQ
Sbjct: 366 YIQMDNLVDSPDHPASAELHRCGCWHLQRNQQRI*IMGASLREALLRVLGDCSSVPVPQG 545
Query: 182 FGWEAKQDTDNCHRLVHPAGFNLLTPLGSD*PFP 283
+A+QD D+ RLVHP GF+ L P+G+ PFP
Sbjct: 546 SVGKAEQDPDDRDRLVHPVGFDHLAPVGACEPFP 647
Score = 100 bits (213), Expect = 8e-021
Identities = 50/94 (53%), Positives = 58/94 (61%)
Frame = -2 / -1
Query: 285 QGKGQSEPKGVRRLKPAGWTRR*QLSVSCFASQPNL*GRDTDGQSPKMQRRASRRGGPMT 106
+GKG P G R KP GWTRR + S SC A + *G TD QSP+ +RRASRR PM
Sbjct: 649 RGKGSHAPTGAR*SKPTGWTRRSRSSGSCSAFPTDP*GTGTDEQSPRTRRRASRREAPMI 470
Query: 105 RIHY*LHWKHQRPHQ*SSIGAKW*EVSIR*SI*M 4
I *L W+ Q+PH+*SS A W S R SI*M
Sbjct: 469 HIRC*LRWRCQQPHR*SSAEAGWSGESTRLSI*M 368
>gb|AV913277.1|AV913277 AV913277 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags21i03 5', mRNA sequence
Length = 631
Score = 193 bits (416), Expect = 8e-049
Identities = 74/108 (68%), Positives = 86/108 (79%)
Frame = +3 / +1
Query: 6 FKWXXXXXXXXXXXXXNFIGVVAGVSNAINNGYESWGPLFGKLFFAFWVIVHLYPFLKGL 185
FKW N +GVVAG S AIN+GY+SWGPLFGKLFFAFWVIVHLYPFLKGL
Sbjct: 175 FKWTTLLIPPTTILIINMVGVVAGTSYAINSGYQSWGPLFGKLFFAFWVIVHLYPFLKGL 354
Query: 186 VGRQNRTPTIVIVWSILLASIFSLLWVRIDPFLAKDDGPLLEECGLDC 329
+GRQNRTPTIVIVW++LLASIFSLLWVR+DPF + GP ++ CG++C
Sbjct: 355 MGRQNRTPTIVIVWAVLLASIFSLLWVRVDPFTTRLAGPNIQTCGINC 498
Score = 136 bits (292), Expect = 1e-031
Identities = 61/92 (66%), Positives = 66/92 (71%)
Frame = -1 / -3
Query: 277 GSIRTQRSEKIEASRMDQTMTIVGVLFCLPTKPLRKGYRWTITQNAKKSFPKRGPHDSYP 98
GS RT EKIEA R QTMTIVGV FCLP +PLRKGY+ TITQ AKKSFPK GP D P
Sbjct: 446 GSTRTHSKEKIEARRTAQTMTIVGVRFCLPIRPLRKGYK*TITQKAKKSFPKSGPQDW*P 267
Query: 97 LLIALETPATTPMKFNRSKVVGGINKVVHLNV 2
LL+A E PATTP VVGG+ VVHLN+
Sbjct: 266 LLMA*EVPATTPTMLMIKMVVGGMRSVVHLNM 171
Score = 120 bits (256), Expect = 9e-027
Identities = 50/101 (49%), Positives = 68/101 (67%)
Frame = -3 / -2
Query: 332 VAIQTTLLKKWTIILCKERVNPNPKE*ED*SQQDGPDDDNCRCPVLPPNQTFEEGIQMDN 153
+A+ T L W C E +N NP++ ED*SQ+D PDDDN RC VLP ++T EEG+ ++N
Sbjct: 501 LAVDATGLDIWASETCSEWINTNPQQGED*SQEDSPDDDNRRCAVLPAHKTLEEGV*VNN 322
Query: 152 HPKCKEELPEEGAP*LVSIIDCIGNTSDHTNEVQ*EQSGRR 30
HP+ KEELPEE P LV+ +D +G TS+ T+ V + RR
Sbjct: 321 HPEGKEELPEERPPRLVTTVDGVGGTSNDTDHVNDQDGRRR 199
>gb|AV920051.1|AV920051 AV920051 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags9b06 3', mRNA sequence
Length = 680
Score = 193 bits (416), Expect = 8e-049
Identities = 74/108 (68%), Positives = 86/108 (79%)
Frame = +3 / -1
Query: 6 FKWXXXXXXXXXXXXXNFIGVVAGVSNAINNGYESWGPLFGKLFFAFWVIVHLYPFLKGL 185
FKW N +GVVAG S AIN+GY+SWGPLFGKLFFAFWVIVHLYPFLKGL
Sbjct: 638 FKWTTLLIPPTTILIINMVGVVAGTSYAINSGYQSWGPLFGKLFFAFWVIVHLYPFLKGL 459
Query: 186 VGRQNRTPTIVIVWSILLASIFSLLWVRIDPFLAKDDGPLLEECGLDC 329
+GRQNRTPTIVIVW++LLASIFSLLWVR+DPF + GP ++ CG++C
Sbjct: 458 MGRQNRTPTIVIVWAVLLASIFSLLWVRVDPFTTRLAGPNIQTCGINC 315
Score = 136 bits (292), Expect = 1e-031
Identities = 61/92 (66%), Positives = 66/92 (71%)
Frame = -1 / +1
Query: 277 GSIRTQRSEKIEASRMDQTMTIVGVLFCLPTKPLRKGYRWTITQNAKKSFPKRGPHDSYP 98
GS RT EKIEA R QTMTIVGV FCLP +PLRKGY+ TITQ AKKSFPK GP D P
Sbjct: 367 GSTRTHSKEKIEARRTAQTMTIVGVRFCLPIRPLRKGYK*TITQKAKKSFPKSGPQDW*P 546
Query: 97 LLIALETPATTPMKFNRSKVVGGINKVVHLNV 2
LL+A E PATTP VVGG+ VVHLN+
Sbjct: 547 LLMA*EVPATTPTMLMIKMVVGGMRSVVHLNM 642
Score = 120 bits (256), Expect = 9e-027
Identities = 50/101 (49%), Positives = 68/101 (67%)
Frame = -3 / +3
Query: 332 VAIQTTLLKKWTIILCKERVNPNPKE*ED*SQQDGPDDDNCRCPVLPPNQTFEEGIQMDN 153
+A+ T L W C E +N NP++ ED*SQ+D PDDDN RC VLP ++T EEG+ ++N
Sbjct: 312 LAVDATGLDIWASETCSEWINTNPQQGED*SQEDSPDDDNRRCAVLPAHKTLEEGV*VNN 491
Query: 152 HPKCKEELPEEGAP*LVSIIDCIGNTSDHTNEVQ*EQSGRR 30
HP+ KEELPEE P LV+ +D +G TS+ T+ V + RR
Sbjct: 492 HPEGKEELPEERPPRLVTTVDGVGGTSNDTDHVNDQDGRRR 614
>gb|AV930906.1|AV930906 AV930906 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp.
vulgare cDNA clone basd25l19 3', mRNA sequence
Length = 505
Score = 193 bits (416), Expect = 8e-049
Identities = 74/108 (68%), Positives = 86/108 (79%)
Frame = +3 / -1
Query: 6 FKWXXXXXXXXXXXXXNFIGVVAGVSNAINNGYESWGPLFGKLFFAFWVIVHLYPFLKGL 185
FKW N +GVVAG S AIN+GY+SWGPLFGKLFFAFWVI+HLYPFLKGL
Sbjct: 421 FKWTTLLIPPTTILIINLVGVVAGTSYAINSGYQSWGPLFGKLFFAFWVIIHLYPFLKGL 242
Query: 186 VGRQNRTPTIVIVWSILLASIFSLLWVRIDPFLAKDDGPLLEECGLDC 329
+GRQNRTPTIV+VW+ILLASIFSLLWVRIDPF + GP ++ CG++C
Sbjct: 241 MGRQNRTPTIVVVWAILLASIFSLLWVRIDPFTTRVTGPDIQMCGINC 98
Score = 138 bits (297), Expect = 2e-032
Identities = 59/92 (64%), Positives = 67/92 (72%)
Frame = -1 / +3
Query: 277 GSIRTQRSEKIEASRMDQTMTIVGVLFCLPTKPLRKGYRWTITQNAKKSFPKRGPHDSYP 98
GS+RT EK++A RM QT T+VGV FC P PLR GY+W ITQ AKKSFPK GPHD P
Sbjct: 150 GSMRTHSKEKMDARRMAQTTTMVGVRFCRPISPLRNGYKWIITQKAKKSFPKSGPHD**P 329
Query: 97 LLIALETPATTPMKFNRSKVVGGINKVVHLNV 2
LLIA E PATTP + VVGGI +VVHLN+
Sbjct: 330 LLIA*EVPATTPTRLMIKIVVGGIRRVVHLNM 425
Score = 105 bits (224), Expect = 2e-022
Identities = 45/99 (45%), Positives = 68/99 (68%)
Frame = -3 / +2
Query: 335 LVAIQTTLLKKWTIILCKERVNPNPKE*ED*SQQDGPDDDNCRCPVLPPNQTFEEGIQMD 156
L+A+ T L W C ERV+ NP++ ED ++DGPDD++ R VLP + EE +Q+D
Sbjct: 92 LLAVDATHLDIWPSDSCGERVDANPQQGEDGCKKDGPDDNDGRRAVLPSH*PLEEWVQVD 271
Query: 155 NHPKCKEELPEEGAP*LVSIIDCIGNTSDHTNEVQ*EQS 39
NHP+ KEELPE+ +P*L++ +D +G TS +T++V + S
Sbjct: 272 NHPEGKEELPEKRSP*LIAAVDRVGGTSHNTDKVDDQDS 388
>gb|AV934882.1|AV934882 AV934882 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal2a04 3', mRNA sequence
Length = 650
Score = 193 bits (416), Expect = 8e-049
Identities = 74/108 (68%), Positives = 86/108 (79%)
Frame = +3 / -1
Query: 6 FKWXXXXXXXXXXXXXNFIGVVAGVSNAINNGYESWGPLFGKLFFAFWVIVHLYPFLKGL 185
FKW N +GVVAG S AIN+GY+SWGPLFGKLFFAFWVIVHLYPFLKGL
Sbjct: 638 FKWTTLLIPPTTILIINMVGVVAGTSYAINSGYQSWGPLFGKLFFAFWVIVHLYPFLKGL 459
Query: 186 VGRQNRTPTIVIVWSILLASIFSLLWVRIDPFLAKDDGPLLEECGLDC 329
+GRQNRTPTIVIVW++LLASIFSLLWVR+DPF + GP ++ CG++C
Sbjct: 458 MGRQNRTPTIVIVWAVLLASIFSLLWVRVDPFTTRLAGPNIQTCGINC 315
Score = 136 bits (292), Expect = 1e-031
Identities = 61/92 (66%), Positives = 66/92 (71%)
Frame = -1 / +1
Query: 277 GSIRTQRSEKIEASRMDQTMTIVGVLFCLPTKPLRKGYRWTITQNAKKSFPKRGPHDSYP 98
GS RT EKIEA R QTMTIVGV FCLP +PLRKGY+ TITQ AKKSFPK GP D P
Sbjct: 367 GSTRTHSKEKIEARRTAQTMTIVGVRFCLPIRPLRKGYK*TITQKAKKSFPKSGPQDW*P 546
Query: 97 LLIALETPATTPMKFNRSKVVGGINKVVHLNV 2
LL+A E PATTP VVGG+ VVHLN+
Sbjct: 547 LLMA*EVPATTPTMLMIKMVVGGMRSVVHLNM 642
Score = 120 bits (256), Expect = 9e-027
Identities = 50/101 (49%), Positives = 68/101 (67%)
Frame = -3 / +3
Query: 332 VAIQTTLLKKWTIILCKERVNPNPKE*ED*SQQDGPDDDNCRCPVLPPNQTFEEGIQMDN 153
+A+ T L W C E +N NP++ ED*SQ+D PDDDN RC VLP ++T EEG+ ++N
Sbjct: 312 LAVDATGLDIWASETCSEWINTNPQQGED*SQEDSPDDDNRRCAVLPAHKTLEEGV*VNN 491
Query: 152 HPKCKEELPEEGAP*LVSIIDCIGNTSDHTNEVQ*EQSGRR 30
HP+ KEELPEE P LV+ +D +G TS+ T+ V + RR
Sbjct: 492 HPEGKEELPEERPPRLVTTVDGVGGTSNDTDHVNDQDGRRR 614
>gb|BM816139.1|BM816139 HC105G09_T3.ab1 HC Hordeum vulgare subsp. vulgare cDNA clone
HC105G09_T3.ab1 similar to (AF200528) cellulose
synthase-4 [Zea mays],(AF200529) cellulose synthase-5
[Zea mays],(AF200533) cellulose synthase-9 [Zea
mays],cellulose synthase catalytic subunit [Arabidopsis
thaliana],unnamed protein product [Arabidopsis
thaliana],, mRNA sequence
Length = 916
Score = 193 bits (416), Expect = 8e-049
Identities = 74/108 (68%), Positives = 86/108 (79%)
Frame = +3 / +1
Query: 6 FKWXXXXXXXXXXXXXNFIGVVAGVSNAINNGYESWGPLFGKLFFAFWVIVHLYPFLKGL 185
FKW N +GVVAG S AIN+GY+SWGPLFGKLFFAFWVIVHLYPFLKGL
Sbjct: 316 FKWTTLLIPPTTILIINMVGVVAGTSYAINSGYQSWGPLFGKLFFAFWVIVHLYPFLKGL 495
Query: 186 VGRQNRTPTIVIVWSILLASIFSLLWVRIDPFLAKDDGPLLEECGLDC 329
+GRQNRTPTIVIVW++LLASIFSLLWVR+DPF + GP ++ CG++C
Sbjct: 496 MGRQNRTPTIVIVWAVLLASIFSLLWVRVDPFTTRLAGPNIQTCGINC 639
Score = 136 bits (292), Expect = 1e-031
Identities = 61/92 (66%), Positives = 66/92 (71%)
Frame = -1 / -3
Query: 277 GSIRTQRSEKIEASRMDQTMTIVGVLFCLPTKPLRKGYRWTITQNAKKSFPKRGPHDSYP 98
GS RT EKIEA R QTMTIVGV FCLP +PLRKGY+ TITQ AKKSFPK GP D P
Sbjct: 587 GSTRTHSKEKIEARRTAQTMTIVGVRFCLPIRPLRKGYK*TITQKAKKSFPKSGPQDW*P 408
Query: 97 LLIALETPATTPMKFNRSKVVGGINKVVHLNV 2
LL+A E PATTP VVGG+ VVHLN+
Sbjct: 407 LLMA*EVPATTPTMLMIKMVVGGMRSVVHLNM 312
Score = 119 bits (255), Expect = 1e-026
Identities = 50/100 (50%), Positives = 67/100 (67%)
Frame = -3 / -2
Query: 329 AIQTTLLKKWTIILCKERVNPNPKE*ED*SQQDGPDDDNCRCPVLPPNQTFEEGIQMDNH 150
A+ T L W C E +N NP++ ED*SQ+D PDDDN RC VLP ++T EEG+ ++NH
Sbjct: 639 AVDATGLDIWASETCSEWINTNPQQGED*SQEDSPDDDNRRCAVLPAHKTLEEGV*VNNH 460
Query: 149 PKCKEELPEEGAP*LVSIIDCIGNTSDHTNEVQ*EQSGRR 30
P+ KEELPEE P LV+ +D +G TS+ T+ V + RR
Sbjct: 459 PEGKEELPEERPPRLVTTVDGVGGTSNDTDHVNDQDGRRR 340
>gb|BJ466285.1|BJ466285 BJ466285 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags31h15 3', mRNA sequence
Length = 669
Score = 193 bits (416), Expect = 8e-049
Identities = 74/108 (68%), Positives = 86/108 (79%)
Frame = +3 / -1
Query: 6 FKWXXXXXXXXXXXXXNFIGVVAGVSNAINNGYESWGPLFGKLFFAFWVIVHLYPFLKGL 185
FKW N +GVVAG S AIN+GY+SWGPLFGKLFFAFWVIVHLYPFLKGL
Sbjct: 597 FKWTTLLIPPTTILIINMVGVVAGTSYAINSGYQSWGPLFGKLFFAFWVIVHLYPFLKGL 418
Query: 186 VGRQNRTPTIVIVWSILLASIFSLLWVRIDPFLAKDDGPLLEECGLDC 329
+GRQNRTPTIVIVW++LLASIFSLLWVR+DPF + GP ++ CG++C
Sbjct: 417 MGRQNRTPTIVIVWAVLLASIFSLLWVRVDPFTTRLAGPNIQTCGINC 274
Score = 136 bits (292), Expect = 1e-031
Identities = 61/92 (66%), Positives = 66/92 (71%)
Frame = -1 / +2
Query: 277 GSIRTQRSEKIEASRMDQTMTIVGVLFCLPTKPLRKGYRWTITQNAKKSFPKRGPHDSYP 98
GS RT EKIEA R QTMTIVGV FCLP +PLRKGY+ TITQ AKKSFPK GP D P
Sbjct: 326 GSTRTHSKEKIEARRTAQTMTIVGVRFCLPIRPLRKGYK*TITQKAKKSFPKSGPQDW*P 505
Query: 97 LLIALETPATTPMKFNRSKVVGGINKVVHLNV 2
LL+A E PATTP VVGG+ VVHLN+
Sbjct: 506 LLMA*EVPATTPTMLMIKMVVGGMRSVVHLNM 601
Score = 120 bits (256), Expect = 9e-027
Identities = 50/101 (49%), Positives = 68/101 (67%)
Frame = -3 / +1
Query: 332 VAIQTTLLKKWTIILCKERVNPNPKE*ED*SQQDGPDDDNCRCPVLPPNQTFEEGIQMDN 153
+A+ T L W C E +N NP++ ED*SQ+D PDDDN RC VLP ++T EEG+ ++N
Sbjct: 271 LAVDATGLDIWASETCSEWINTNPQQGED*SQEDSPDDDNRRCAVLPAHKTLEEGV*VNN 450
Query: 152 HPKCKEELPEEGAP*LVSIIDCIGNTSDHTNEVQ*EQSGRR 30
HP+ KEELPEE P LV+ +D +G TS+ T+ V + RR
Sbjct: 451 HPEGKEELPEERPPRLVTTVDGVGGTSNDTDHVNDQDGRRR 573
>gb|BU967242.1|BU967242 HB03K11r BC Hordeum vulgare subsp. vulgare cDNA clone HB03K11
5-PRIME, mRNA sequence
Length = 577
Score = 193 bits (416), Expect = 8e-049
Identities = 74/108 (68%), Positives = 86/108 (79%)
Frame = +3 / +1
Query: 6 FKWXXXXXXXXXXXXXNFIGVVAGVSNAINNGYESWGPLFGKLFFAFWVIVHLYPFLKGL 185
FKW N +GVVAG S AIN+GY+SWGPLFGKLFFAFWVI+HLYPFLKGL
Sbjct: 190 FKWTTLLIPPTTILIINLVGVVAGTSYAINSGYQSWGPLFGKLFFAFWVIIHLYPFLKGL 369
Query: 186 VGRQNRTPTIVIVWSILLASIFSLLWVRIDPFLAKDDGPLLEECGLDC 329
+GRQNRTPTIV+VW+ILLASIFSLLWVRIDPF + GP ++ CG++C
Sbjct: 370 MGRQNRTPTIVVVWAILLASIFSLLWVRIDPFTTRVTGPDIQMCGINC 513
Score = 138 bits (297), Expect = 2e-032
Identities = 59/92 (64%), Positives = 67/92 (72%)
Frame = -1 / -3
Query: 277 GSIRTQRSEKIEASRMDQTMTIVGVLFCLPTKPLRKGYRWTITQNAKKSFPKRGPHDSYP 98
GS+RT EK++A RM QT T+VGV FC P PLR GY+W ITQ AKKSFPK GPHD P
Sbjct: 461 GSMRTHSKEKMDARRMAQTTTMVGVRFCRPISPLRNGYKWIITQKAKKSFPKSGPHD**P 282
Query: 97 LLIALETPATTPMKFNRSKVVGGINKVVHLNV 2
LLIA E PATTP + VVGGI +VVHLN+
Sbjct: 281 LLIA*EVPATTPTRLMIKIVVGGIRRVVHLNM 186
Score = 105 bits (224), Expect = 2e-022
Identities = 45/99 (45%), Positives = 68/99 (68%)
Frame = -3 / -2
Query: 335 LVAIQTTLLKKWTIILCKERVNPNPKE*ED*SQQDGPDDDNCRCPVLPPNQTFEEGIQMD 156
L+A+ T L W C ERV+ NP++ ED ++DGPDD++ R VLP + EE +Q+D
Sbjct: 519 LLAVDATHLDIWPSDSCGERVDANPQQGEDGCKKDGPDDNDGRRAVLPSH*PLEEWVQVD 340
Query: 155 NHPKCKEELPEEGAP*LVSIIDCIGNTSDHTNEVQ*EQS 39
NHP+ KEELPE+ +P*L++ +D +G TS +T++V + S
Sbjct: 339 NHPEGKEELPEKRSP*LIAAVDRVGGTSHNTDKVDDQDS 223
>gb|CB860194.1|CB860194 HI12P13w HI Hordeum vulgare subsp. vulgare cDNA clone HI12P13
3-PRIME, mRNA sequence
Length = 651
Score = 193 bits (416), Expect = 8e-049
Identities = 74/108 (68%), Positives = 86/108 (79%)
Frame = +3 / -1
Query: 6 FKWXXXXXXXXXXXXXNFIGVVAGVSNAINNGYESWGPLFGKLFFAFWVIVHLYPFLKGL 185
FKW N +GVVAG S AIN+GY+SWGPLFGKLFFAFWVI+HLYPFLKGL
Sbjct: 477 FKWTTLLIPPTTILIINLVGVVAGTSYAINSGYQSWGPLFGKLFFAFWVIIHLYPFLKGL 298
Query: 186 VGRQNRTPTIVIVWSILLASIFSLLWVRIDPFLAKDDGPLLEECGLDC 329
+GRQNRTPTIV+VW+ILLASIFSLLWVRIDPF + GP ++ CG++C
Sbjct: 297 MGRQNRTPTIVVVWAILLASIFSLLWVRIDPFTTRVTGPDIQMCGINC 154
Score = 138 bits (297), Expect = 2e-032
Identities = 59/92 (64%), Positives = 67/92 (72%)
Frame = -1 / +2
Query: 277 GSIRTQRSEKIEASRMDQTMTIVGVLFCLPTKPLRKGYRWTITQNAKKSFPKRGPHDSYP 98
GS+RT EK++A RM QT T+VGV FC P PLR GY+W ITQ AKKSFPK GPHD P
Sbjct: 206 GSMRTHSKEKMDARRMAQTTTMVGVRFCRPISPLRNGYKWIITQKAKKSFPKSGPHD**P 385
Query: 97 LLIALETPATTPMKFNRSKVVGGINKVVHLNV 2
LLIA E PATTP + VVGGI +VVHLN+
Sbjct: 386 LLIA*EVPATTPTRLMIKIVVGGIRRVVHLNM 481
Score = 105 bits (224), Expect = 2e-022
Identities = 45/99 (45%), Positives = 68/99 (68%)
Frame = -3 / +1
Query: 335 LVAIQTTLLKKWTIILCKERVNPNPKE*ED*SQQDGPDDDNCRCPVLPPNQTFEEGIQMD 156
L+A+ T L W C ERV+ NP++ ED ++DGPDD++ R VLP + EE +Q+D
Sbjct: 148 LLAVDATHLDIWPSDSCGERVDANPQQGEDGCKKDGPDDNDGRRAVLPSH*PLEEWVQVD 327
Query: 155 NHPKCKEELPEEGAP*LVSIIDCIGNTSDHTNEVQ*EQS 39
NHP+ KEELPE+ +P*L++ +D +G TS +T++V + S
Sbjct: 328 NHPEGKEELPEKRSP*LIAAVDRVGGTSHNTDKVDDQDS 444
>gb|CB876338.1|CB876338 HX10P19w HX Hordeum vulgare subsp. vulgare cDNA clone HX10P19
3-PRIME, mRNA sequence
Length = 616
Score = 193 bits (416), Expect = 8e-049
Identities = 74/108 (68%), Positives = 86/108 (79%)
Frame = +3 / -2
Query: 6 FKWXXXXXXXXXXXXXNFIGVVAGVSNAINNGYESWGPLFGKLFFAFWVIVHLYPFLKGL 185
FKW N +GVVAG S AIN+GY+SWGPLFGKLFFAFWVI+HLYPFLKGL
Sbjct: 420 FKWTTLLIPPTTILIINLVGVVAGTSYAINSGYQSWGPLFGKLFFAFWVIIHLYPFLKGL 241
Query: 186 VGRQNRTPTIVIVWSILLASIFSLLWVRIDPFLAKDDGPLLEECGLDC 329
+GRQNRTPTIV+VW+ILLASIFSLLWVRIDPF + GP ++ CG++C
Sbjct: 240 MGRQNRTPTIVVVWAILLASIFSLLWVRIDPFTTRVTGPDIQMCGINC 97
Score = 138 bits (297), Expect = 2e-032
Identities = 59/92 (64%), Positives = 67/92 (72%)
Frame = -1 / +2
Query: 277 GSIRTQRSEKIEASRMDQTMTIVGVLFCLPTKPLRKGYRWTITQNAKKSFPKRGPHDSYP 98
GS+RT EK++A RM QT T+VGV FC P PLR GY+W ITQ AKKSFPK GPHD P
Sbjct: 149 GSMRTHSKEKMDARRMAQTTTMVGVRFCRPISPLRNGYKWIITQKAKKSFPKSGPHD**P 328
Query: 97 LLIALETPATTPMKFNRSKVVGGINKVVHLNV 2
LLIA E PATTP + VVGGI +VVHLN+
Sbjct: 329 LLIA*EVPATTPTRLMIKIVVGGIRRVVHLNM 424
Score = 105 bits (224), Expect = 2e-022
Identities = 45/99 (45%), Positives = 68/99 (68%)
Frame = -3 / +1
Query: 335 LVAIQTTLLKKWTIILCKERVNPNPKE*ED*SQQDGPDDDNCRCPVLPPNQTFEEGIQMD 156
L+A+ T L W C ERV+ NP++ ED ++DGPDD++ R VLP + EE +Q+D
Sbjct: 91 LLAVDATHLDIWPSDSCGERVDANPQQGEDGCKKDGPDDNDGRRAVLPSH*PLEEWVQVD 270
Query: 155 NHPKCKEELPEEGAP*LVSIIDCIGNTSDHTNEVQ*EQS 39
NHP+ KEELPE+ +P*L++ +D +G TS +T++V + S
Sbjct: 271 NHPEGKEELPEKRSP*LIAAVDRVGGTSHNTDKVDDQDS 387
>gb|BQ766406.1|BQ766406 EBro08_SQ005_L20_R root, 3 week, drought-stressed, cv Optic, EBro08
Hordeum vulgare subsp. vulgare cDNA clone
EBro08_SQ005_L20 5', mRNA sequence
Length = 538
Score = 188 bits (405), Expect(2) = 2e-048
Identities = 71/92 (77%), Positives = 83/92 (90%)
Frame = +3 / +2
Query: 54 NFIGVVAGVSNAINNGYESWGPLFGKLFFAFWVIVHLYPFLKGLVGRQNRTPTIVIVWSI 233
N +GVVAG S AIN+GY+SWGPLFGKLFFAFWVIVHLYPFLKGL+GRQNRTPTIVIVW++
Sbjct: 11 NMVGVVAGTSYAINSGYQSWGPLFGKLFFAFWVIVHLYPFLKGLMGRQNRTPTIVIVWAV 190
Query: 234 LLASIFSLLWVRIDPFLAKDDGPLLEECGLDC 329
LLASIFSLLWVR+DPF + GP ++ CG++C
Sbjct: 191 LLASIFSLLWVRVDPFTTRLAGPNIQTCGINC 286
Score = 118 bits (252), Expect = 3e-026
Identities = 52/72 (72%), Positives = 55/72 (76%)
Frame = -1 / -2
Query: 277 GSIRTQRSEKIEASRMDQTMTIVGVLFCLPTKPLRKGYRWTITQNAKKSFPKRGPHDSYP 98
GS RT EKIEA R QTMTIVGV FCLP +PLRKGY+ TITQ AKKSFPK GP D P
Sbjct: 234 GSTRTHSKEKIEARRTAQTMTIVGVRFCLPIRPLRKGYK*TITQKAKKSFPKSGPQDW*P 55
Query: 97 LLIALETPATTP 62
LL+A E PATTP
Sbjct: 54 LLMA*EVPATTP 19
Score = 117 bits (250), Expect = 6e-026
Identities = 48/93 (51%), Positives = 65/93 (69%)
Frame = -3 / -1
Query: 332 VAIQTTLLKKWTIILCKERVNPNPKE*ED*SQQDGPDDDNCRCPVLPPNQTFEEGIQMDN 153
+A+ T L W C E +N NP++ ED*SQ+D PDDDN RC VLP ++T EEG+ ++N
Sbjct: 289 LAVDATGLDIWASETCSEWINTNPQQGED*SQEDSPDDDNRRCAVLPAHKTLEEGV*VNN 110
Query: 152 HPKCKEELPEEGAP*LVSIIDCIGNTSDHTNEV 54
HP+ KEELPEE P LV+ +D +G TS+ T+ V
Sbjct: 109 HPEGKEELPEERPPRLVTTVDGVGGTSNDTDHV 11
Score = 25.4 bits (49), Expect(2) = 2e-048
Identities = 7/13 (53%), Positives = 9/13 (69%)
Frame = +3 / +1
Query: 477 PNIWDTLEGKWRL 515
PN+W L GKW +
Sbjct: 265 PNLWHQLLGKWEI 303
>gb|AV918571.1|AV918571 AV918571 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags21i03 3', mRNA sequence
Length = 598
Score = 188 bits (405), Expect(2) = 2e-048
Identities = 71/92 (77%), Positives = 83/92 (90%)
Frame = +3 / -2
Query: 54 NFIGVVAGVSNAINNGYESWGPLFGKLFFAFWVIVHLYPFLKGLVGRQNRTPTIVIVWSI 233
N +GVVAG S AIN+GY+SWGPLFGKLFFAFWVIVHLYPFLKGL+GRQNRTPTIVIVW++
Sbjct: 573 NMVGVVAGTSYAINSGYQSWGPLFGKLFFAFWVIVHLYPFLKGLMGRQNRTPTIVIVWAV 394
Query: 234 LLASIFSLLWVRIDPFLAKDDGPLLEECGLDC 329
LLASIFSLLWVR+DPF + GP ++ CG++C
Sbjct: 393 LLASIFSLLWVRVDPFTTRLAGPNIQTCGINC 298
Score = 123 bits (264), Expect = 7e-028
Identities = 56/83 (67%), Positives = 59/83 (71%)
Frame = -1 / +2
Query: 277 GSIRTQRSEKIEASRMDQTMTIVGVLFCLPTKPLRKGYRWTITQNAKKSFPKRGPHDSYP 98
GS RT EKIEA R QTMTIVGV FCLP +PLRKGY+ TITQ AKKSFPK GP D P
Sbjct: 350 GSTRTHSKEKIEARRTAQTMTIVGVRFCLPIRPLRKGYK*TITQKAKKSFPKSGPQDW*P 529
Query: 97 LLIALETPATTPMKFNRSKVVGG 29
LL+A E PATTP VVGG
Sbjct: 530 LLMA*EVPATTPTMLMIKMVVGG 598
Score = 120 bits (256), Expect = 9e-027
Identities = 50/101 (49%), Positives = 68/101 (67%)
Frame = -3 / +1
Query: 332 VAIQTTLLKKWTIILCKERVNPNPKE*ED*SQQDGPDDDNCRCPVLPPNQTFEEGIQMDN 153
+A+ T L W C E +N NP++ ED*SQ+D PDDDN RC VLP ++T EEG+ ++N
Sbjct: 295 LAVDATGLDIWASETCSEWINTNPQQGED*SQEDSPDDDNRRCAVLPAHKTLEEGV*VNN 474
Query: 152 HPKCKEELPEEGAP*LVSIIDCIGNTSDHTNEVQ*EQSGRR 30
HP+ KEELPEE P LV+ +D +G TS+ T+ V + RR
Sbjct: 475 HPEGKEELPEERPPRLVTTVDGVGGTSNDTDHVNDQDGRRR 597
Score = 25.4 bits (49), Expect(2) = 2e-048
Identities = 7/13 (53%), Positives = 9/13 (69%)
Frame = +3 / -1
Query: 477 PNIWDTLEGKWRL 515
PN+W L GKW +
Sbjct: 319 PNLWHQLLGKWEI 281
>gb|AV936150.1|AV936150 AV936150 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal10e13 3', mRNA sequence
Length = 616
Score = 188 bits (405), Expect(2) = 3e-048
Identities = 71/92 (77%), Positives = 83/92 (90%)
Frame = +3 / -2
Query: 54 NFIGVVAGVSNAINNGYESWGPLFGKLFFAFWVIVHLYPFLKGLVGRQNRTPTIVIVWSI 233
N +GVVAG S AIN+GY+SWGPLFGKLFFAFWVIVHLYPFLKGL+GRQNRTPTIVIVW++
Sbjct: 576 NMVGVVAGTSYAINSGYQSWGPLFGKLFFAFWVIVHLYPFLKGLMGRQNRTPTIVIVWAV 397
Query: 234 LLASIFSLLWVRIDPFLAKDDGPLLEECGLDC 329
LLASIFSLLWVR+DPF + GP ++ CG++C
Sbjct: 396 LLASIFSLLWVRVDPFTTRLAGPNIQTCGINC 301
Score = 127 bits (273), Expect = 4e-029
Identities = 58/88 (65%), Positives = 62/88 (70%)
Frame = -1 / +2
Query: 277 GSIRTQRSEKIEASRMDQTMTIVGVLFCLPTKPLRKGYRWTITQNAKKSFPKRGPHDSYP 98
GS RT EKIEA R QTMTIVGV FCLP +PLRKGY+ TITQ AKKSFPK GP D P
Sbjct: 353 GSTRTHSKEKIEARRTAQTMTIVGVRFCLPIRPLRKGYK*TITQKAKKSFPKSGPQDW*P 532
Query: 97 LLIALETPATTPMKFNRSKVVGGINKVV 14
LL+A E PATTP VVGG+ VV
Sbjct: 533 LLMA*EVPATTPTMLMIKMVVGGMRSVV 616
Score = 120 bits (256), Expect = 9e-027
Identities = 50/101 (49%), Positives = 68/101 (67%)
Frame = -3 / +1
Query: 332 VAIQTTLLKKWTIILCKERVNPNPKE*ED*SQQDGPDDDNCRCPVLPPNQTFEEGIQMDN 153
+A+ T L W C E +N NP++ ED*SQ+D PDDDN RC VLP ++T EEG+ ++N
Sbjct: 298 LAVDATGLDIWASETCSEWINTNPQQGED*SQEDSPDDDNRRCAVLPAHKTLEEGV*VNN 477
Query: 152 HPKCKEELPEEGAP*LVSIIDCIGNTSDHTNEVQ*EQSGRR 30
HP+ KEELPEE P LV+ +D +G TS+ T+ V + RR
Sbjct: 478 HPEGKEELPEERPPRLVTTVDGVGGTSNDTDHVNDQDGRRR 600
Score = 25.4 bits (49), Expect(2) = 3e-048
Identities = 7/13 (53%), Positives = 9/13 (69%)
Frame = +3 / -1
Query: 477 PNIWDTLEGKWRL 515
PN+W L GKW +
Sbjct: 322 PNLWHQLLGKWEI 284
>gb|AV919198.1|AV919198 AV919198 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags4p09 3', mRNA sequence
Length = 631
Score = 188 bits (405), Expect(2) = 3e-048
Identities = 71/92 (77%), Positives = 83/92 (90%)
Frame = +3 / -3
Query: 54 NFIGVVAGVSNAINNGYESWGPLFGKLFFAFWVIVHLYPFLKGLVGRQNRTPTIVIVWSI 233
N +GVVAG S AIN+GY+SWGPLFGKLFFAFWVIVHLYPFLKGL+GRQNRTPTIVIVW++
Sbjct: 590 NMVGVVAGTSYAINSGYQSWGPLFGKLFFAFWVIVHLYPFLKGLMGRQNRTPTIVIVWAV 411
Query: 234 LLASIFSLLWVRIDPFLAKDDGPLLEECGLDC 329
LLASIFSLLWVR+DPF + GP ++ CG++C
Sbjct: 410 LLASIFSLLWVRVDPFTTRLAGPNIQTCGINC 315
Score = 127 bits (273), Expect = 4e-029
Identities = 58/88 (65%), Positives = 62/88 (70%)
Frame = -1 / +1
Query: 277 GSIRTQRSEKIEASRMDQTMTIVGVLFCLPTKPLRKGYRWTITQNAKKSFPKRGPHDSYP 98
GS RT EKIEA R QTMTIVGV FCLP +PLRKGY+ TITQ AKKSFPK GP D P
Sbjct: 367 GSTRTHSKEKIEARRTAQTMTIVGVRFCLPIRPLRKGYK*TITQKAKKSFPKSGPQDW*P 546
Query: 97 LLIALETPATTPMKFNRSKVVGGINKVV 14
LL+A E PATTP VVGG+ VV
Sbjct: 547 LLMA*EVPATTPTMLMIKMVVGGMRSVV 630
Score = 120 bits (256), Expect = 9e-027
Identities = 50/101 (49%), Positives = 68/101 (67%)
Frame = -3 / +3
Query: 332 VAIQTTLLKKWTIILCKERVNPNPKE*ED*SQQDGPDDDNCRCPVLPPNQTFEEGIQMDN 153
+A+ T L W C E +N NP++ ED*SQ+D PDDDN RC VLP ++T EEG+ ++N
Sbjct: 312 LAVDATGLDIWASETCSEWINTNPQQGED*SQEDSPDDDNRRCAVLPAHKTLEEGV*VNN 491
Query: 152 HPKCKEELPEEGAP*LVSIIDCIGNTSDHTNEVQ*EQSGRR 30
HP+ KEELPEE P LV+ +D +G TS+ T+ V + RR
Sbjct: 492 HPEGKEELPEERPPRLVTTVDGVGGTSNDTDHVNDQDGRRR 614
Score = 25.4 bits (49), Expect(2) = 3e-048
Identities = 7/13 (53%), Positives = 9/13 (69%)
Frame = +3 / -2
Query: 477 PNIWDTLEGKWRL 515
PN+W L GKW +
Sbjct: 336 PNLWHQLLGKWEI 298
>gb|AV931092.1|AV931092 AV931092 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp.
vulgare cDNA clone basd18i05 3', mRNA sequence
Length = 658
Score = 191 bits (412), Expect = 3e-048
Identities = 74/108 (68%), Positives = 85/108 (78%)
Frame = +3 / -2
Query: 6 FKWXXXXXXXXXXXXXNFIGVVAGVSNAINNGYESWGPLFGKLFFAFWVIVHLYPFLKGL 185
FKW N +GVVAG S AIN GY+SWGPLFGKLFFAFWVI+HLYPFLKGL
Sbjct: 477 FKWTTLLIPPTTILIINLVGVVAGTSYAINIGYQSWGPLFGKLFFAFWVIIHLYPFLKGL 298
Query: 186 VGRQNRTPTIVIVWSILLASIFSLLWVRIDPFLAKDDGPLLEECGLDC 329
+GRQNRTPTIV+VW+ILLASIFSLLWVRIDPF + GP ++ CG++C
Sbjct: 297 MGRQNRTPTIVVVWAILLASIFSLLWVRIDPFTTRVTGPDIQMCGINC 154
Score = 138 bits (295), Expect = 4e-032
Identities = 58/92 (63%), Positives = 67/92 (72%)
Frame = -1 / +2
Query: 277 GSIRTQRSEKIEASRMDQTMTIVGVLFCLPTKPLRKGYRWTITQNAKKSFPKRGPHDSYP 98
GS+RT EK++A RM QT T+VGV FC P PLR GY+W ITQ AKKSFPK GPHD P
Sbjct: 206 GSMRTHSKEKMDARRMAQTTTMVGVRFCRPISPLRNGYKWIITQKAKKSFPKSGPHD**P 385
Query: 97 LLIALETPATTPMKFNRSKVVGGINKVVHLNV 2
+LIA E PATTP + VVGGI +VVHLN+
Sbjct: 386 MLIA*EVPATTPTRLMIKIVVGGIRRVVHLNM 481
Score = 104 bits (222), Expect = 5e-022
Identities = 45/99 (45%), Positives = 68/99 (68%)
Frame = -3 / +1
Query: 335 LVAIQTTLLKKWTIILCKERVNPNPKE*ED*SQQDGPDDDNCRCPVLPPNQTFEEGIQMD 156
L+A+ T L W C ERV+ NP++ ED ++DGPDD++ R VLP + EE +Q+D
Sbjct: 148 LLAVDATHLDIWPSDSCGERVDANPQQGEDGCKKDGPDDNDGRRAVLPSH*PLEEWVQVD 327
Query: 155 NHPKCKEELPEEGAP*LVSIIDCIGNTSDHTNEVQ*EQS 39
NHP+ KEELPE+ +P*L++ +D +G TS +T++V + S
Sbjct: 328 NHPEGKEELPEKRSP*LIADVDRVGGTSHNTDKVDDQDS 444
>gb|AV931093.1|AV931093 AV931093 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp.
vulgare cDNA clone basd18i06 3', mRNA sequence
Length = 658
Score = 191 bits (412), Expect = 3e-048
Identities = 74/108 (68%), Positives = 85/108 (78%)
Frame = +3 / -1
Query: 6 FKWXXXXXXXXXXXXXNFIGVVAGVSNAINNGYESWGPLFGKLFFAFWVIVHLYPFLKGL 185
FKW N +GVVAG S AIN GY+SWGPLFGKLFFAFWVI+HLYPFLKGL
Sbjct: 484 FKWTTLLIPPTTILIINLVGVVAGTSYAINIGYQSWGPLFGKLFFAFWVIIHLYPFLKGL 305
Query: 186 VGRQNRTPTIVIVWSILLASIFSLLWVRIDPFLAKDDGPLLEECGLDC 329
+GRQNRTPTIV+VW+ILLASIFSLLWVRIDPF + GP ++ CG++C
Sbjct: 304 MGRQNRTPTIVVVWAILLASIFSLLWVRIDPFTTRVTGPDIQMCGINC 161
Score = 138 bits (295), Expect = 4e-032
Identities = 58/92 (63%), Positives = 67/92 (72%)
Frame = -1 / +3
Query: 277 GSIRTQRSEKIEASRMDQTMTIVGVLFCLPTKPLRKGYRWTITQNAKKSFPKRGPHDSYP 98
GS+RT EK++A RM QT T+VGV FC P PLR GY+W ITQ AKKSFPK GPHD P
Sbjct: 213 GSMRTHSKEKMDARRMAQTTTMVGVRFCRPISPLRNGYKWIITQKAKKSFPKSGPHD**P 392
Query: 97 LLIALETPATTPMKFNRSKVVGGINKVVHLNV 2
+LIA E PATTP + VVGGI +VVHLN+
Sbjct: 393 MLIA*EVPATTPTRLMIKIVVGGIRRVVHLNM 488
Score = 104 bits (222), Expect = 5e-022
Identities = 45/99 (45%), Positives = 68/99 (68%)
Frame = -3 / +2
Query: 335 LVAIQTTLLKKWTIILCKERVNPNPKE*ED*SQQDGPDDDNCRCPVLPPNQTFEEGIQMD 156
L+A+ T L W C ERV+ NP++ ED ++DGPDD++ R VLP + EE +Q+D
Sbjct: 155 LLAVDATHLDIWPSDSCGERVDANPQQGEDGCKKDGPDDNDGRRAVLPSH*PLEEWVQVD 334
Query: 155 NHPKCKEELPEEGAP*LVSIIDCIGNTSDHTNEVQ*EQS 39
NHP+ KEELPE+ +P*L++ +D +G TS +T++V + S
Sbjct: 335 NHPEGKEELPEKRSP*LIADVDRVGGTSHNTDKVDDQDS 451
>gb|BQ468619.1|BQ468619 HM01M13T HM Hordeum vulgare subsp. vulgare cDNA clone HM01M13
5-PRIME, mRNA sequence
Length = 653
Score = 190 bits (410), Expect = 5e-048
Identities = 73/108 (67%), Positives = 85/108 (78%)
Frame = +3 / +3
Query: 6 FKWXXXXXXXXXXXXXNFIGVVAGVSNAINNGYESWGPLFGKLFFAFWVIVHLYPFLKGL 185
FKW N +GVVAG S AIN+GY+SWGPLFGKLFFAFWVI+HLYPFLKGL
Sbjct: 285 FKWTTLLIPPTTILIINLVGVVAGTSYAINSGYQSWGPLFGKLFFAFWVIIHLYPFLKGL 464
Query: 186 VGRQNRTPTIVIVWSILLASIFSLLWVRIDPFLAKDDGPLLEECGLDC 329
+GRQNRTPTIV+VW+ILLA IFSLLWVRIDPF + GP ++ CG++C
Sbjct: 465 MGRQNRTPTIVVVWAILLAYIFSLLWVRIDPFTTRVTGPDIQMCGINC 608
Score = 137 bits (293), Expect = 7e-032
Identities = 59/92 (64%), Positives = 66/92 (71%)
Frame = -1 / -2
Query: 277 GSIRTQRSEKIEASRMDQTMTIVGVLFCLPTKPLRKGYRWTITQNAKKSFPKRGPHDSYP 98
GS+RT EK+ A RM QT T+VGV FC P PLR GY+W ITQ AKKSFPK GPHD P
Sbjct: 556 GSMRTHSKEKMYARRMAQTTTMVGVRFCRPISPLRNGYKWIITQKAKKSFPKSGPHD**P 377
Query: 97 LLIALETPATTPMKFNRSKVVGGINKVVHLNV 2
LLIA E PATTP + VVGGI +VVHLN+
Sbjct: 376 LLIA*EVPATTPTRLMIKIVVGGIRRVVHLNM 281
Score = 105 bits (224), Expect = 2e-022
Identities = 45/99 (45%), Positives = 68/99 (68%)
Frame = -3 / -1
Query: 335 LVAIQTTLLKKWTIILCKERVNPNPKE*ED*SQQDGPDDDNCRCPVLPPNQTFEEGIQMD 156
L+A+ T L W C ERV+ NP++ ED ++DGPDD++ R VLP + EE +Q+D
Sbjct: 614 LLAVDATHLDIWPSDSCGERVDANPQQGEDVCKKDGPDDNDGRRAVLPSH*PLEEWVQVD 435
Query: 155 NHPKCKEELPEEGAP*LVSIIDCIGNTSDHTNEVQ*EQS 39
NHP+ KEELPE+ +P*L++ +D +G TS +T++V + S
Sbjct: 434 NHPEGKEELPEKRSP*LIAAVDRVGGTSHNTDKVDDQDS 318
>gb|BI776485.2|BI776485 EBpi05_SQ001_J01_R pistil, 8 DPA, no treatment, cv Optic, EBpi05
Hordeum vulgare subsp. vulgare cDNA clone
EBpi05_SQ001_J01 5', mRNA sequence
Length = 518
Score = 189 bits (407), Expect = 1e-047
Identities = 73/107 (68%), Positives = 85/107 (79%)
Frame = +3 / +1
Query: 6 FKWXXXXXXXXXXXXXNFIGVVAGVSNAINNGYESWGPLFGKLFFAFWVIVHLYPFLKGL 185
FKW N +GVVAG S AIN+GY+SWGPLFGKLFFAFWVI+HLYPFLKGL
Sbjct: 196 FKWTTLLIPPTTILIINLVGVVAGTSYAINSGYQSWGPLFGKLFFAFWVIIHLYPFLKGL 375
Query: 186 VGRQNRTPTIVIVWSILLASIFSLLWVRIDPFLAKDDGPLLEECGLD 326
+GRQNRTPTIV+VW+ILLASIFSLLWVRIDPF + GP ++ CG++
Sbjct: 376 MGRQNRTPTIVVVWAILLASIFSLLWVRIDPFTTRVTGPDIQMCGIN 516
Score = 138 bits (297), Expect = 2e-032
Identities = 59/92 (64%), Positives = 67/92 (72%)
Frame = -1 / -1
Query: 277 GSIRTQRSEKIEASRMDQTMTIVGVLFCLPTKPLRKGYRWTITQNAKKSFPKRGPHDSYP 98
GS+RT EK++A RM QT T+VGV FC P PLR GY+W ITQ AKKSFPK GPHD P
Sbjct: 467 GSMRTHSKEKMDARRMAQTTTMVGVRFCRPISPLRNGYKWIITQKAKKSFPKSGPHD**P 288
Query: 97 LLIALETPATTPMKFNRSKVVGGINKVVHLNV 2
LLIA E PATTP + VVGGI +VVHLN+
Sbjct: 287 LLIA*EVPATTPTRLMIKIVVGGIRRVVHLNM 192
Score = 101 bits (215), Expect = 4e-021
Identities = 43/96 (44%), Positives = 65/96 (67%)
Frame = -3 / -3
Query: 326 IQTTLLKKWTIILCKERVNPNPKE*ED*SQQDGPDDDNCRCPVLPPNQTFEEGIQMDNHP 147
+ T L W C ERV+ NP++ ED ++DGPDD++ R VLP + EE +Q+DNHP
Sbjct: 516 VDATHLDIWPSDSCGERVDANPQQGEDGCKKDGPDDNDGRRAVLPSH*PLEEWVQVDNHP 337
Query: 146 KCKEELPEEGAP*LVSIIDCIGNTSDHTNEVQ*EQS 39
+ KEELPE+ +P*L++ +D +G TS +T++V + S
Sbjct: 336 EGKEELPEKRSP*LIAAVDRVGGTSHNTDKVDDQDS 229
>gb|AJ462437.1|AJ462437 AJ462437 S00002 Hordeum vulgare subsp. vulgare cDNA clone
S0000200081H04F1, mRNA sequence
Length = 360
Score = 188 bits (405), Expect = 3e-047
Identities = 78/89 (87%), Positives = 83/89 (93%)
Frame = -1 / -1
Query: 268 RTQRSEKIEASRMDQTMTIVGVLFCLPTKPLRKGYRWTITQNAKKSFPKRGPHDSYPLLI 89
RT RSE IEA+RMDQT+TIVGVLFCLP +PLR GYR TITQNAKKSFPKRGPHDSYPLLI
Sbjct: 357 RTHRSEMIEANRMDQTITIVGVLFCLPNRPLRNGYR*TITQNAKKSFPKRGPHDSYPLLI 178
Query: 88 ALETPATTPMKFNRSKVVGGINKVVHLNV 2
ALE PATTPMKF+RS+VVGGINKVVHLNV
Sbjct: 177 ALEMPATTPMKFSRSRVVGGINKVVHLNV 91
Score = 180 bits (388), Expect = 6e-045
Identities = 73/89 (82%), Positives = 75/89 (84%)
Frame = +3 / +2
Query: 3 TFKWXXXXXXXXXXXXXNFIGVVAGVSNAINNGYESWGPLFGKLFFAFWVIVHLYPFLKG 182
TFKW NFIGVVAG+SNAINNGYESWGPLFGKLFFAFWVIVHLYPFLKG
Sbjct: 92 TFKWTTLLIPPTTLLLLNFIGVVAGISNAINNGYESWGPLFGKLFFAFWVIVHLYPFLKG 271
Query: 183 LVGRQNRTPTIVIVWSILLASIFSLLWVR 269
L+GRQNRTPTIVIVWSILLASI SLLWVR
Sbjct: 272 LLGRQNRTPTIVIVWSILLASIISLLWVR 358
Score = 129 bits (276), Expect = 2e-029
Identities = 51/88 (57%), Positives = 68/88 (77%)
Frame = -3 / -3
Query: 266 NPKE*ED*SQQDGPDDDNCRCPVLPPNQTFEEGIQMDNHPKCKEELPEEGAP*LVSIIDC 87
+P+E +D SQQDGPDD + R PVLP QT EE +QM+NHP+ +EELPEE P* +S++DC
Sbjct: 355 HPQERDDRSQQDGPDDHDRRGPVLPSQQTLEERVQMNNHPEREEELPEERPP*FISVVDC 176
Query: 86 IGNTSDHTNEVQ*EQSGRRYQ*GSPFKC 3
+G+ S+HT+EVQ +Q GR Q G PF+C
Sbjct: 175 VGDASNHTDEVQQKQGGRGNQQGCPFEC 92
Score = 101 bits (216), Expect = 3e-021
Identities = 47/89 (52%), Positives = 59/89 (66%)
Frame = +2 / +1
Query: 2 HI*MDYLIDTSYHFAPIELHWCGRWCFQCNQ*WIRVMGPPLREALLCILGDCPSVSLPQR 181
+I MD L+D+ H A ELH CG W Q NQ I +MG LREALL +LGDC SV +PQ
Sbjct: 91 YIQMDNLVDSPDHPASAELHRCGCWHLQRNQQRI*IMGASLREALLRVLGDCSSVPVPQG 270
Query: 182 FGWEAKQDTDNCHRLVHPAGFNLLTPLGS 268
+A+QD D+ RLVHP GF+ L P+G+
Sbjct: 271 SVGKAEQDPDDRDRLVHPVGFDHLAPVGA 357
>gb|BU967165.1|BU967165 HB03H16r BC Hordeum vulgare subsp. vulgare cDNA clone HB03H16
5-PRIME, mRNA sequence
Length = 471
Score = 188 bits (405), Expect = 3e-047
Identities = 71/92 (77%), Positives = 83/92 (90%)
Frame = +3 / +2
Query: 54 NFIGVVAGVSNAINNGYESWGPLFGKLFFAFWVIVHLYPFLKGLVGRQNRTPTIVIVWSI 233
N +GVVAG S AIN+GY+SWGPLFGKLFFAFWVI+HLYPFLKGL+GRQNRTPTIV+VW+I
Sbjct: 14 NLVGVVAGTSYAINSGYQSWGPLFGKLFFAFWVIIHLYPFLKGLMGRQNRTPTIVVVWAI 193
Query: 234 LLASIFSLLWVRIDPFLAKDDGPLLEECGLDC 329
LLASIFSLLWVRIDPF + GP ++ CG++C
Sbjct: 194 LLASIFSLLWVRIDPFTTRVTGPDIQMCGINC 289
Score = 118 bits (252), Expect = 3e-026
Identities = 49/74 (66%), Positives = 55/74 (74%)
Frame = -1 / -1
Query: 277 GSIRTQRSEKIEASRMDQTMTIVGVLFCLPTKPLRKGYRWTITQNAKKSFPKRGPHDSYP 98
GS+RT EK++A RM QT T+VGV FC P PLR GY+W ITQ AKKSFPK GPHD P
Sbjct: 237 GSMRTHSKEKMDARRMAQTTTMVGVRFCRPISPLRNGYKWIITQKAKKSFPKSGPHD**P 58
Query: 97 LLIALETPATTPMK 56
LLIA E PATTP +
Sbjct: 57 LLIA*EVPATTPTR 16
Score = 104 bits (222), Expect = 5e-022
Identities = 44/94 (46%), Positives = 66/94 (70%)
Frame = -3 / -3
Query: 335 LVAIQTTLLKKWTIILCKERVNPNPKE*ED*SQQDGPDDDNCRCPVLPPNQTFEEGIQMD 156
L+A+ T L W C ERV+ NP++ ED ++DGPDD++ R VLP + EE +Q+D
Sbjct: 295 LLAVDATHLDIWPSDSCGERVDANPQQGEDGCKKDGPDDNDGRRAVLPSH*PLEEWVQVD 116
Query: 155 NHPKCKEELPEEGAP*LVSIIDCIGNTSDHTNEV 54
NHP+ KEELPE+ +P*L++ +D +G TS +T++V
Sbjct: 115 NHPEGKEELPEKRSP*LIAAVDRVGGTSHNTDKV 14
>gb|AV914933.1|AV914933 AV914933 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags9b06 5', mRNA sequence
Length = 654
Score = 181 bits (389), Expect = 4e-045
Identities = 71/99 (71%), Positives = 79/99 (79%)
Frame = +3 / +2
Query: 6 FKWXXXXXXXXXXXXXNFIGVVAGVSNAINNGYESWGPLFGKLFFAFWVIVHLYPFLKGL 185
FKW N +GVVAG S AIN+GY+SWGPLFGKLFFAFWVIVHLYPFLKGL
Sbjct: 356 FKWTTLLIPPTTILIINMVGVVAGTSYAINSGYQSWGPLFGKLFFAFWVIVHLYPFLKGL 535
Query: 186 VGRQNRTPTIVIVWSILLASIFSLLWVRIDPFLAKDDGP 302
+GRQNRTPTIVIVW++LLASIFSLLWVR+DPF + GP
Sbjct: 536 MGRQNRTPTIVIVWAVLLASIFSLLWVRVDPFTTRLAGP 652
Score = 136 bits (292), Expect = 1e-031
Identities = 61/92 (66%), Positives = 66/92 (71%)
Frame = -1 / -1
Query: 277 GSIRTQRSEKIEASRMDQTMTIVGVLFCLPTKPLRKGYRWTITQNAKKSFPKRGPHDSYP 98
GS RT EKIEA R QTMTIVGV FCLP +PLRKGY+ TITQ AKKSFPK GP D P
Sbjct: 627 GSTRTHSKEKIEARRTAQTMTIVGVRFCLPIRPLRKGYK*TITQKAKKSFPKSGPQDW*P 448
Query: 97 LLIALETPATTPMKFNRSKVVGGINKVVHLNV 2
LL+A E PATTP VVGG+ VVHLN+
Sbjct: 447 LLMA*EVPATTPTMLMIKMVVGGMRSVVHLNM 352
Score = 116 bits (247), Expect = 2e-025
Identities = 47/91 (51%), Positives = 63/91 (69%)
Frame = -3 / -3
Query: 302 WTIILCKERVNPNPKE*ED*SQQDGPDDDNCRCPVLPPNQTFEEGIQMDNHPKCKEELPE 123
W C E +N NP++ ED*SQ+D PDDDN RC VLP ++T EEG+ ++NHP+ KEELPE
Sbjct: 652 WASETCSEWINTNPQQGED*SQEDSPDDDNRRCAVLPAHKTLEEGV*VNNHPEGKEELPE 473
Query: 122 EGAP*LVSIIDCIGNTSDHTNEVQ*EQSGRR 30
E P LV+ +D +G TS+ T+ V + RR
Sbjct: 472 ERPPRLVTTVDGVGGTSNDTDHVNDQDGRRR 380
>gb|AV925215.1|AV925215 AV925215 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp.
vulgare cDNA clone basd22e04 5', mRNA sequence
Length = 656
Score = 177 bits (382), Expect = 4e-044
Identities = 69/95 (72%), Positives = 77/95 (81%)
Frame = +3 / +3
Query: 6 FKWXXXXXXXXXXXXXNFIGVVAGVSNAINNGYESWGPLFGKLFFAFWVIVHLYPFLKGL 185
FKW N +GVVAG S AIN+GY+SWGPLFGKLFFAFWVIVHLYPFLKGL
Sbjct: 363 FKWTTLLIPPTTILIINMVGVVAGTSYAINSGYQSWGPLFGKLFFAFWVIVHLYPFLKGL 542
Query: 186 VGRQNRTPTIVIVWSILLASIFSLLWVRIDPFLAK 290
+GRQNRTPTIVIVW++LLASIFSLLWVR+DPF +
Sbjct: 543 MGRQNRTPTIVIVWAVLLASIFSLLWVRVDPFTTR 647
Score = 136 bits (292), Expect = 1e-031
Identities = 61/92 (66%), Positives = 66/92 (71%)
Frame = -1 / -2
Query: 277 GSIRTQRSEKIEASRMDQTMTIVGVLFCLPTKPLRKGYRWTITQNAKKSFPKRGPHDSYP 98
GS RT EKIEA R QTMTIVGV FCLP +PLRKGY+ TITQ AKKSFPK GP D P
Sbjct: 634 GSTRTHSKEKIEARRTAQTMTIVGVRFCLPIRPLRKGYK*TITQKAKKSFPKSGPQDW*P 455
Query: 97 LLIALETPATTPMKFNRSKVVGGINKVVHLNV 2
LL+A E PATTP VVGG+ VVHLN+
Sbjct: 454 LLMA*EVPATTPTMLMIKMVVGGMRSVVHLNM 359
Score = 113 bits (242), Expect = 8e-025
Identities = 46/86 (53%), Positives = 62/86 (72%)
Frame = -3 / -1
Query: 287 CKERVNPNPKE*ED*SQQDGPDDDNCRCPVLPPNQTFEEGIQMDNHPKCKEELPEEGAP* 108
C E +N NP++ ED*SQ+D PDDDN RC VLP ++T EEG+ ++NHP+ KEELPEE P
Sbjct: 644 CSEWINTNPQQGED*SQEDSPDDDNRRCAVLPAHKTLEEGV*VNNHPEGKEELPEERPPR 465
Query: 107 LVSIIDCIGNTSDHTNEVQ*EQSGRR 30
LV+ +D +G TS+ T+ V + RR
Sbjct: 464 LVTTVDGVGGTSNDTDHVNDQDGRRR 387
>gb|BM370580.2|BM370580 EBro08_SQ004_K11_R root, 3 week, drought-stressed, cv Optic, EBro08
Hordeum vulgare subsp. vulgare cDNA clone
EBro08_SQ004_K11 5', mRNA sequence
Length = 606
Score = 177 bits (382), Expect = 4e-044
Identities = 67/86 (77%), Positives = 78/86 (90%)
Frame = +3 / +1
Query: 72 AGVSNAINNGYESWGPLFGKLFFAFWVIVHLYPFLKGLVGRQNRTPTIVIVWSILLASIF 251
AG S AIN+GY+SWGPLFGKLFFAFWVIVHLYPFLKGL+GRQNRTPTIVIVW++LLASIF
Sbjct: 1 AGTSYAINSGYQSWGPLFGKLFFAFWVIVHLYPFLKGLMGRQNRTPTIVIVWAVLLASIF 180
Query: 252 SLLWVRIDPFLAKDDGPLLEECGLDC 329
SLLWVR+DPF + GP ++ CG++C
Sbjct: 181 SLLWVRVDPFTTRLAGPNIQTCGINC 258
Score = 112 bits (240), Expect = 2e-024
Identities = 46/87 (52%), Positives = 61/87 (70%)
Frame = -3 / -1
Query: 332 VAIQTTLLKKWTIILCKERVNPNPKE*ED*SQQDGPDDDNCRCPVLPPNQTFEEGIQMDN 153
+A+ T L W C E +N NP++ ED*SQ+D PDDDN RC VLP ++T EEG+ ++N
Sbjct: 261 LAVDATGLDIWASETCSEWINTNPQQGED*SQEDSPDDDNRRCAVLPAHKTLEEGV*VNN 82
Query: 152 HPKCKEELPEEGAP*LVSIIDCIGNTS 72
HP+ KEELPEE P LV+ +D +G TS
Sbjct: 81 HPEGKEELPEERPPRLVTTVDGVGGTS 1
Score = 108 bits (231), Expect = 3e-023
Identities = 48/68 (70%), Positives = 51/68 (75%)
Frame = -1 / -2
Query: 277 GSIRTQRSEKIEASRMDQTMTIVGVLFCLPTKPLRKGYRWTITQNAKKSFPKRGPHDSYP 98
GS RT EKIEA R QTMTIVGV FCLP +PLRKGY+ TITQ AKKSFPK GP D P
Sbjct: 206 GSTRTHSKEKIEARRTAQTMTIVGVRFCLPIRPLRKGYK*TITQKAKKSFPKSGPQDW*P 27
Query: 97 LLIALETP 74
LL+A E P
Sbjct: 26 LLMA*EVP 3
>gb|AL503512.1|AL503512 AL503512 Hordeum vulgare Barke roots Hordeum vulgare subsp. vulgare
cDNA clone HW02G16T 5', mRNA sequence
Length = 700
Score = 172 bits (371), Expect = 1e-042
Identities = 66/94 (70%), Positives = 78/94 (82%)
Frame = +3 / +3
Query: 6 FKWXXXXXXXXXXXXXNFIGVVAGVSNAINNGYESWGPLFGKLFFAFWVIVHLYPFLKGL 185
FKW N +G+VAG+S AIN+GY+SWGPLFGKLFF+ WVI+HLYPFLKGL
Sbjct: 321 FKWTSLLIPPTTVLVINLVGMVAGISYAINSGYQSWGPLFGKLFFSIWVILHLYPFLKGL 500
Query: 186 VGRQNRTPTIVIVWSILLASIFSLLWVRIDPFLA 287
+G+QNRTPTIVIVWSILLASIFSLLWV+IDPF++
Sbjct: 501 MGKQNRTPTIVIVWSILLASIFSLLWVKIDPFIS 602
Score = 136 bits (291), Expect = 1e-031
Identities = 58/92 (63%), Positives = 68/92 (73%)
Frame = -1 / -1
Query: 280 KGSIRTQRSEKIEASRMDQTMTIVGVLFCLPTKPLRKGYRWTITQNAKKSFPKRGPHDSY 101
KGSI TQR EK+EA R+DQTMT+VGV FC P +PLRKG RW ITQ KKSFPK GP D
Sbjct: 595 KGSIFTQRREKMEARRIDQTMTMVGVRFCFPMRPLRKG*RWRITQIEKKSFPKSGPQDW* 416
Query: 100 PLLIALETPATTPMKFNRSKVVGGINKVVHLN 5
PLL+A + PAT P + VVGG+ ++VHLN
Sbjct: 415 PLLMAYDMPATMPTRLITRTVVGGMRRLVHLN 320
>gb|BQ660756.1|BQ660756 HI05F03u HI Hordeum vulgare subsp. vulgare cDNA clone HI05F03
3-PRIME, mRNA sequence
Length = 539
Score = 172 bits (371), Expect = 1e-042
Identities = 66/94 (70%), Positives = 78/94 (82%)
Frame = +3 / -1
Query: 6 FKWXXXXXXXXXXXXXNFIGVVAGVSNAINNGYESWGPLFGKLFFAFWVIVHLYPFLKGL 185
FKW N +G+VAG+S AIN+GY+SWGPLFGKLFF+ WVI+HLYPFLKGL
Sbjct: 452 FKWTSLLIPPTTVLVINLVGMVAGISYAINSGYQSWGPLFGKLFFSIWVILHLYPFLKGL 273
Query: 186 VGRQNRTPTIVIVWSILLASIFSLLWVRIDPFLA 287
+G+QNRTPTIVIVWSILLASIFSLLWV+IDPF++
Sbjct: 272 MGKQNRTPTIVIVWSILLASIFSLLWVKIDPFIS 171
Score = 136 bits (291), Expect = 1e-031
Identities = 58/92 (63%), Positives = 68/92 (73%)
Frame = -1 / +1
Query: 280 KGSIRTQRSEKIEASRMDQTMTIVGVLFCLPTKPLRKGYRWTITQNAKKSFPKRGPHDSY 101
KGSI TQR EK+EA R+DQTMT+VGV FC P +PLRKG RW ITQ KKSFPK GP D
Sbjct: 178 KGSIFTQRREKMEARRIDQTMTMVGVRFCFPMRPLRKG*RWRITQIEKKSFPKSGPQDW* 357
Query: 100 PLLIALETPATTPMKFNRSKVVGGINKVVHLN 5
PLL+A + PAT P + VVGG+ ++VHLN
Sbjct: 358 PLLMAYDMPATMPTRLITRTVVGGMRRLVHLN 453
>gb|CA030609.1|CA030609 HX07J05r HX Hordeum vulgare subsp. vulgare cDNA clone HX07J05
5-PRIME, mRNA sequence
Length = 617
Score = 172 bits (371), Expect = 1e-042
Identities = 66/94 (70%), Positives = 78/94 (82%)
Frame = +3 / +2
Query: 6 FKWXXXXXXXXXXXXXNFIGVVAGVSNAINNGYESWGPLFGKLFFAFWVIVHLYPFLKGL 185
FKW N +G+VAG+S AIN+GY+SWGPLFGKLFF+ WVI+HLYPFLKGL
Sbjct: 329 FKWTSLLIPPTTVLVINLVGMVAGISYAINSGYQSWGPLFGKLFFSIWVILHLYPFLKGL 508
Query: 186 VGRQNRTPTIVIVWSILLASIFSLLWVRIDPFLA 287
+G+QNRTPTIVIVWSILLASIFSLLWV+IDPF++
Sbjct: 509 MGKQNRTPTIVIVWSILLASIFSLLWVKIDPFIS 610
Score = 136 bits (291), Expect = 1e-031
Identities = 58/92 (63%), Positives = 68/92 (73%)
Frame = -1 / -3
Query: 280 KGSIRTQRSEKIEASRMDQTMTIVGVLFCLPTKPLRKGYRWTITQNAKKSFPKRGPHDSY 101
KGSI TQR EK+EA R+DQTMT+VGV FC P +PLRKG RW ITQ KKSFPK GP D
Sbjct: 603 KGSIFTQRREKMEARRIDQTMTMVGVRFCFPMRPLRKG*RWRITQIEKKSFPKSGPQDW* 424
Query: 100 PLLIALETPATTPMKFNRSKVVGGINKVVHLN 5
PLL+A + PAT P + VVGG+ ++VHLN
Sbjct: 423 PLLMAYDMPATMPTRLITRTVVGGMRRLVHLN 328
>gb|CA030647.1|CA030647 HX07L05r HX Hordeum vulgare subsp. vulgare cDNA clone HX07L05
5-PRIME, mRNA sequence
Length = 638
Score = 172 bits (371), Expect = 1e-042
Identities = 66/94 (70%), Positives = 78/94 (82%)
Frame = +3 / +2
Query: 6 FKWXXXXXXXXXXXXXNFIGVVAGVSNAINNGYESWGPLFGKLFFAFWVIVHLYPFLKGL 185
FKW N +G+VAG+S AIN+GY+SWGPLFGKLFF+ WVI+HLYPFLKGL
Sbjct: 329 FKWTSLLIPPTTVLVINLVGMVAGISYAINSGYQSWGPLFGKLFFSIWVILHLYPFLKGL 508
Query: 186 VGRQNRTPTIVIVWSILLASIFSLLWVRIDPFLA 287
+G+QNRTPTIVIVWSILLASIFSLLWV+IDPF++
Sbjct: 509 MGKQNRTPTIVIVWSILLASIFSLLWVKIDPFIS 610
Score = 136 bits (291), Expect = 1e-031
Identities = 58/92 (63%), Positives = 68/92 (73%)
Frame = -1 / -3
Query: 280 KGSIRTQRSEKIEASRMDQTMTIVGVLFCLPTKPLRKGYRWTITQNAKKSFPKRGPHDSY 101
KGSI TQR EK+EA R+DQTMT+VGV FC P +PLRKG RW ITQ KKSFPK GP D
Sbjct: 603 KGSIFTQRREKMEARRIDQTMTMVGVRFCFPMRPLRKG*RWRITQIEKKSFPKSGPQDW* 424
Query: 100 PLLIALETPATTPMKFNRSKVVGGINKVVHLN 5
PLL+A + PAT P + VVGG+ ++VHLN
Sbjct: 423 PLLMAYDMPATMPTRLITRTVVGGMRRLVHLN 328
>gb|CB875201.1|CB875201 HX07J05w HX Hordeum vulgare subsp. vulgare cDNA clone HX07J05
3-PRIME, mRNA sequence
Length = 652
Score = 172 bits (371), Expect = 1e-042
Identities = 66/94 (70%), Positives = 78/94 (82%)
Frame = +3 / -1
Query: 6 FKWXXXXXXXXXXXXXNFIGVVAGVSNAINNGYESWGPLFGKLFFAFWVIVHLYPFLKGL 185
FKW N +G+VAG+S AIN+GY+SWGPLFGKLFF+ WVI+HLYPFLKGL
Sbjct: 631 FKWTSLLIPPTTVLVINLVGMVAGISYAINSGYQSWGPLFGKLFFSIWVILHLYPFLKGL 452
Query: 186 VGRQNRTPTIVIVWSILLASIFSLLWVRIDPFLA 287
+G+QNRTPTIVIVWSILLASIFSLLWV+IDPF++
Sbjct: 451 MGKQNRTPTIVIVWSILLASIFSLLWVKIDPFIS 350
Score = 136 bits (291), Expect = 1e-031
Identities = 58/92 (63%), Positives = 68/92 (73%)
Frame = -1 / +3
Query: 280 KGSIRTQRSEKIEASRMDQTMTIVGVLFCLPTKPLRKGYRWTITQNAKKSFPKRGPHDSY 101
KGSI TQR EK+EA R+DQTMT+VGV FC P +PLRKG RW ITQ KKSFPK GP D
Sbjct: 357 KGSIFTQRREKMEARRIDQTMTMVGVRFCFPMRPLRKG*RWRITQIEKKSFPKSGPQDW* 536
Query: 100 PLLIALETPATTPMKFNRSKVVGGINKVVHLN 5
PLL+A + PAT P + VVGG+ ++VHLN
Sbjct: 537 PLLMAYDMPATMPTRLITRTVVGGMRRLVHLN 632
>gb|CB875240.1|CB875240 HX07L05w HX Hordeum vulgare subsp. vulgare cDNA clone HX07L05
3-PRIME, mRNA sequence
Length = 654
Score = 172 bits (371), Expect = 1e-042
Identities = 66/94 (70%), Positives = 78/94 (82%)
Frame = +3 / -2
Query: 6 FKWXXXXXXXXXXXXXNFIGVVAGVSNAINNGYESWGPLFGKLFFAFWVIVHLYPFLKGL 185
FKW N +G+VAG+S AIN+GY+SWGPLFGKLFF+ WVI+HLYPFLKGL
Sbjct: 632 FKWTSLLIPPTTVLVINLVGMVAGISYAINSGYQSWGPLFGKLFFSIWVILHLYPFLKGL 453
Query: 186 VGRQNRTPTIVIVWSILLASIFSLLWVRIDPFLA 287
+G+QNRTPTIVIVWSILLASIFSLLWV+IDPF++
Sbjct: 452 MGKQNRTPTIVIVWSILLASIFSLLWVKIDPFIS 351
Score = 136 bits (291), Expect = 1e-031
Identities = 58/92 (63%), Positives = 68/92 (73%)
Frame = -1 / +1
Query: 280 KGSIRTQRSEKIEASRMDQTMTIVGVLFCLPTKPLRKGYRWTITQNAKKSFPKRGPHDSY 101
KGSI TQR EK+EA R+DQTMT+VGV FC P +PLRKG RW ITQ KKSFPK GP D
Sbjct: 358 KGSIFTQRREKMEARRIDQTMTMVGVRFCFPMRPLRKG*RWRITQIEKKSFPKSGPQDW* 537
Query: 100 PLLIALETPATTPMKFNRSKVVGGINKVVHLN 5
PLL+A + PAT P + VVGG+ ++VHLN
Sbjct: 538 PLLMAYDMPATMPTRLITRTVVGGMRRLVHLN 633
>gb|BG368285.2|BG368285 HVSMEi0017H01f Hordeum vulgare 20 DAP spike EST library HVcDNA0010
(20 DAP) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEi0017H01f, mRNA sequence
Length = 755
Score = 167 bits (360), Expect = 4e-041
Identities = 63/78 (80%), Positives = 75/78 (96%)
Frame = +3 / +1
Query: 54 NFIGVVAGVSNAINNGYESWGPLFGKLFFAFWVIVHLYPFLKGLVGRQNRTPTIVIVWSI 233
N +G+VAG+S AIN+GY+SWGPLFGKLFF+ WVI+HLYPFLKGL+G+QNRTPTIVIVWSI
Sbjct: 13 NLVGMVAGISYAINSGYQSWGPLFGKLFFSIWVILHLYPFLKGLMGKQNRTPTIVIVWSI 192
Query: 234 LLASIFSLLWVRIDPFLA 287
LLASIFSLLWV+IDPF++
Sbjct: 193 LLASIFSLLWVKIDPFIS 246
Score = 117 bits (251), Expect = 5e-026
Identities = 50/75 (66%), Positives = 57/75 (76%)
Frame = -1 / -1
Query: 280 KGSIRTQRSEKIEASRMDQTMTIVGVLFCLPTKPLRKGYRWTITQNAKKSFPKRGPHDSY 101
KGSI TQR EK+EA R+DQTMT+VGV FC P +PLRKG RW ITQ KKSFPK GP D
Sbjct: 239 KGSIFTQRREKMEARRIDQTMTMVGVRFCFPMRPLRKG*RWRITQIEKKSFPKSGPQDW* 60
Query: 100 PLLIALETPATTPMK 56
PLL+A + PAT P +
Sbjct: 59 PLLMAYDMPATMPTR 15
>gb|AV929091.1|AV929091 AV929091 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp.
vulgare cDNA clone basd20p06 3', mRNA sequence
Length = 509
Score = 167 bits (360), Expect = 4e-041
Identities = 63/78 (80%), Positives = 75/78 (96%)
Frame = +3 / -2
Query: 54 NFIGVVAGVSNAINNGYESWGPLFGKLFFAFWVIVHLYPFLKGLVGRQNRTPTIVIVWSI 233
N +G+VAG+S AIN+GY+SWGPLFGKLFF+ WVI+HLYPFLKGL+G+QNRTPTIVIVWSI
Sbjct: 502 NLVGMVAGISYAINSGYQSWGPLFGKLFFSIWVILHLYPFLKGLMGKQNRTPTIVIVWSI 323
Query: 234 LLASIFSLLWVRIDPFLA 287
LLASIFSLLWV+IDPF++
Sbjct: 322 LLASIFSLLWVKIDPFIS 269
Score = 117 bits (251), Expect = 5e-026
Identities = 50/75 (66%), Positives = 57/75 (76%)
Frame = -1 / +3
Query: 280 KGSIRTQRSEKIEASRMDQTMTIVGVLFCLPTKPLRKGYRWTITQNAKKSFPKRGPHDSY 101
KGSI TQR EK+EA R+DQTMT+VGV FC P +PLRKG RW ITQ KKSFPK GP D
Sbjct: 276 KGSIFTQRREKMEARRIDQTMTMVGVRFCFPMRPLRKG*RWRITQIEKKSFPKSGPQDW* 455
Query: 100 PLLIALETPATTPMK 56
PLL+A + PAT P +
Sbjct: 456 PLLMAYDMPATMPTR 500
>gb|BJ460872.1|BJ460872 BJ460872 K. Sato unpublished cDNA library, cv. Akashinriki
vegetative stage leaves Hordeum vulgare subsp. vulgare
cDNA clone baak42j03 3', mRNA sequence
Length = 590
Score = 167 bits (360), Expect = 4e-041
Identities = 63/78 (80%), Positives = 75/78 (96%)
Frame = +3 / -1
Query: 54 NFIGVVAGVSNAINNGYESWGPLFGKLFFAFWVIVHLYPFLKGLVGRQNRTPTIVIVWSI 233
N +G+VAG+S AIN+GY+SWGPLFGKLFF+ WVI+HLYPFLKGL+G+QNRTPTIVIVWSI
Sbjct: 557 NLVGMVAGISYAINSGYQSWGPLFGKLFFSIWVILHLYPFLKGLMGKQNRTPTIVIVWSI 378
Query: 234 LLASIFSLLWVRIDPFLA 287
LLASIFSLLWV+IDPF++
Sbjct: 377 LLASIFSLLWVKIDPFIS 324
Score = 124 bits (266), Expect = 4e-028
Identities = 54/85 (63%), Positives = 62/85 (72%)
Frame = -1 / +1
Query: 280 KGSIRTQRSEKIEASRMDQTMTIVGVLFCLPTKPLRKGYRWTITQNAKKSFPKRGPHDSY 101
KGSI TQR EK+EA R+DQTMT+VGV FC P +PLRKG RW ITQ KKSFPK GP D
Sbjct: 331 KGSIFTQRREKMEARRIDQTMTMVGVRFCFPMRPLRKG*RWRITQIEKKSFPKSGPQDW* 510
Query: 100 PLLIALETPATTPMKFNRSKVVGGI 26
PLL+A + PAT P + VVGG+
Sbjct: 511 PLLMAYDMPATMPTRLITRTVVGGM 585
>gb|BQ469740.1|BQ469740 HZ01L16r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ01L16
5-PRIME, mRNA sequence
Length = 403
Score = 167 bits (360), Expect = 4e-041
Identities = 63/78 (80%), Positives = 75/78 (96%)
Frame = +3 / +3
Query: 54 NFIGVVAGVSNAINNGYESWGPLFGKLFFAFWVIVHLYPFLKGLVGRQNRTPTIVIVWSI 233
N +G+VAG+S AIN+GY+SWGPLFGKLFF+ WVI+HLYPFLKGL+G+QNRTPTIVIVWSI
Sbjct: 48 NLVGMVAGISYAINSGYQSWGPLFGKLFFSIWVILHLYPFLKGLMGKQNRTPTIVIVWSI 227
Query: 234 LLASIFSLLWVRIDPFLA 287
LLASIFSLLWV+IDPF++
Sbjct: 228 LLASIFSLLWVKIDPFIS 281
Score = 125 bits (268), Expect = 2e-028
Identities = 54/88 (61%), Positives = 63/88 (71%)
Frame = -1 / -1
Query: 280 KGSIRTQRSEKIEASRMDQTMTIVGVLFCLPTKPLRKGYRWTITQNAKKSFPKRGPHDSY 101
KGSI T R EK+EA RMDQTMT+VGV FC P +PLRKG RW ITQ KKSFPK GP D
Sbjct: 274 KGSIFTHRREKMEARRMDQTMTMVGVRFCFPMRPLRKG*RWRITQIEKKSFPKSGPQDW* 95
Query: 100 PLLIALETPATTPMKFNRSKVVGGINKV 17
PLL+A + PAT P + VVGG+ ++
Sbjct: 94 PLLMAYDMPATMPTRLITRTVVGGMRRL 11
>gb|BF259974.3|BF259974 HVSMEf0020M07f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEf0020M07f, mRNA sequence
Length = 533
Score = 166 bits (358), Expect = 8e-041
Identities = 63/90 (70%), Positives = 73/90 (81%)
Frame = +3 / +3
Query: 6 FKWXXXXXXXXXXXXXNFIGVVAGVSNAINNGYESWGPLFGKLFFAFWVIVHLYPFLKGL 185
FKW N +G+VAGVS+A+NNGY SWGPLFGKLFF+FWVIVHLYPFLKGL
Sbjct: 264 FKWTTLLIPPTTLIIINMVGIVAGVSDAVNNGYGSWGPLFGKLFFSFWVIVHLYPFLKGL 443
Query: 186 VGRQNRTPTIVIVWSILLASIFSLLWVRID 275
+GRQNRTPTIV++WS+LLA IFS +WVRID
Sbjct: 444 MGRQNRTPTIVVLWSVLLAYIFSFVWVRID 533
Score = 121 bits (258), Expect = 5e-027
Identities = 54/89 (60%), Positives = 61/89 (68%)
Frame = -1 / -2
Query: 274 SIRTQRSEKIEASRMDQTMTIVGVLFCLPTKPLRKGYRWTITQNAKKSFPKRGPHDSYPL 95
SI T EK+ ASR DQ+ T+VGV FCLP PLR G R T+TQ KKSFPK GP D YPL
Sbjct: 532 SILTHTKEKM*ASRTDQSTTMVGVRFCLPMSPLRNG*R*TMTQKEKKSFPKSGPQDPYPL 353
Query: 94 LIALETPATTPMKFNRSKVVGGINKVVHL 8
L A +TPAT P VVGGI++VVHL
Sbjct: 352 LTASDTPATMPTMLIMMSVVGGISRVVHL 266
>gb|AV923333.1|AV923333 AV923333 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp.
vulgare cDNA clone basd12l12 5', mRNA sequence
Length = 656
Score = 166 bits (358), Expect = 8e-041
Identities = 63/88 (71%), Positives = 73/88 (82%)
Frame = +3 / +2
Query: 6 FKWXXXXXXXXXXXXXNFIGVVAGVSNAINNGYESWGPLFGKLFFAFWVIVHLYPFLKGL 185
FKW N +G+VAGVS+A+NNGY SWGPLFGKLFF+FWVIVHLYPFLKGL
Sbjct: 392 FKWTTLLIPPTTLIIINMVGIVAGVSDAVNNGYGSWGPLFGKLFFSFWVIVHLYPFLKGL 571
Query: 186 VGRQNRTPTIVIVWSILLASIFSLLWVR 269
+GRQNRTPTIV++WS+LLASIFSL+WVR
Sbjct: 572 MGRQNRTPTIVVLWSVLLASIFSLVWVR 655
Score = 128 bits (275), Expect = 2e-029
Identities = 54/86 (62%), Positives = 61/86 (70%)
Frame = -1 / -3
Query: 265 TQRSEKIEASRMDQTMTIVGVLFCLPTKPLRKGYRWTITQNAKKSFPKRGPHDSYPLLIA 86
T EK+EASR DQ+ T+VGV FCLP PLR G RWT+TQ KKSFPK GP D YPLL A
Sbjct: 651 THTREKMEASRTDQSTTMVGVRFCLPMSPLRNG*RWTMTQKEKKSFPKSGPQDPYPLLTA 472
Query: 85 LETPATTPMKFNRSKVVGGINKVVHL 8
+TPAT P VVGGI++VVHL
Sbjct: 471 SDTPATMPTMLIMMSVVGGISRVVHL 394
Database: Hordeum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:16 PM
Number of letters in database: 175,134,539
Number of sequences in database: 312,970
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 362,210,147
Number of Sequences: 312970
Number of extensions: 6253967
Number of successful extensions: 61259
Number of sequences better than 1.0e-020: 115
length of database: 58,378,179
effective HSP length: 51
effective length of database: 42,416,709
effective search space used: 7210840530
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)