TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 1804904.2.2
(798 letters)
Database: Hordeum_nucl_with_EST.fasta
312,970 sequences; 175,134,539 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BQ766935.1|BQ766935 EBro08_SQ007_D15_R root, 3 week, dro... 307 6e-084
gb|BQ762662.1|BQ762662 EBro02_SQ004_L15_R root, 3 week, hyd... 307 6e-084
gb|BQ764226.1|BQ764226 EBan01_SQ005_A12_R anther, yellow st... 307 6e-084
gb|BI780787.2|BI780787 EBes01_SQ002_D08_R embryo sac, 4-6 D... 307 6e-084
gb|BM101365.2|BM101365 EBpi01_SQ003_K07_R pistil, 1 DPA, no... 307 6e-084
gb|BQ768014.1|BQ768014 EBro08_SQ010_O11_R root, 3 week, dro... 307 6e-084
gb|BM377475.2|BM377475 EBem04_SQ003_D24_R embryo, 12 DPA, n... 307 6e-084
gb|BM370305.2|BM370305 EBro08_SQ003_M14_R root, 3 week, dro... 306 8e-084
gb|BM377699.2|BM377699 EBem04_SQ003_O16_R embryo, 12 DPA, n... 306 8e-084
gb|BE421867.1|BE421867 HWM015cF.10r ITEC HWM Barley Leaf Li... 305 2e-083
gb|BM371259.2|BM371259 EBma08_SQ002_A19_R maternal, 28 DPA,... 305 2e-083
gb|BU982565.1|BU982565 HA26O23r HA Hordeum vulgare subsp. v... 305 2e-083
gb|BU989679.1|BU989679 HF22G11r HF Hordeum vulgare subsp. v... 305 2e-083
gb|BQ657976.1|BQ657976 HA06D06u HA Hordeum vulgare subsp. v... 305 2e-083
gb|CA011664.1|CA011664 HT03D07r HT Hordeum vulgare subsp. v... 305 2e-083
gb|CB883479.1|CB883479 HQ02G05w HQ Hordeum vulgare subsp. v... 305 2e-083
gb|BU983927.1|BU983927 HA31H16r HA Hordeum vulgare subsp. v... 304 3e-083
gb|CA008553.1|CA008553 HU11F06r HU Hordeum vulgare subsp. v... 304 3e-083
gb|BE195642.3|BE195642 HVSMEh0090A15f Hordeum vulgare 5-45 ... 303 7e-083
gb|BE196257.2|BE196257 HVSMEh0091M19f Hordeum vulgare 5-45 ... 303 7e-083
gb|BM816732.1|BM816732 HB02C05_T3.ab1 HB Hordeum vulgare su... 303 7e-083
gb|BM377218.2|BM377218 EBem05_SQ004_H13_R embryo, 14 DPA, n... 303 7e-083
gb|BJ465123.1|BJ465123 BJ465123 K. Sato unpublished cDNA li... 303 7e-083
gb|BU972772.1|BU972772 HB22K20r BC Hordeum vulgare subsp. v... 305 7e-083
gb|AV913899.1|AV913899 AV913899 K. Sato unpublished cDNA li... 303 7e-083
gb|BQ758693.1|BQ758693 EBma07_SQ002_E13_R maternal, 21 DPA,... 306 9e-083
gb|BU994577.1|BU994577 HM07I06r HM Hordeum vulgare subsp. v... 305 2e-082
gb|CA017707.1|CA017707 HV05P22r HV Hordeum vulgare subsp. v... 305 2e-082
gb|CK124268.1|CK124268 BES1824108c13 BES1824 Hordeum vulgar... 305 2e-082
gb|BJ463126.1|BJ463126 BJ463126 K. Sato unpublished cDNA li... 301 3e-082
gb|BQ756834.1|BQ756834 EBem09_SQ003_O10_R embryo, 1 Day ger... 304 4e-082
gb|CK125878.1|CK125878 BES1824111A1h09 BES1824 Hordeum vulg... 300 5e-082
gb|BQ761233.1|BQ761233 EBro04_SQ004_M16_R root, 3 week, sal... 303 6e-082
gb|AW982424.3|AW982424 HVSMEg0003D18f Hordeum vulgare pre-a... 303 8e-082
gb|AJ460495.1|AJ460495 AJ460495 S00002 Hordeum vulgare subs... 303 8e-082
gb|BE420961.1|BE420961 HWM004.D02 ITEC HWM Barley Leaf Libr... 299 9e-082
gb|BE193624.2|BE193624 HVSMEh0082A09f Hordeum vulgare 5-45 ... 303 1e-081
gb|AJ460492.1|AJ460492 AJ460492 S00002 Hordeum vulgare subs... 302 1e-081
gb|BM100980.2|BM100980 EBpi01_SQ002_H24_R pistil, 1 DPA, no... 302 1e-081
gb|BJ463077.1|BJ463077 BJ463077 K. Sato unpublished cDNA li... 301 3e-081
gb|BJ467579.1|BJ467579 BJ467579 K. Sato unpublished cDNA li... 301 3e-081
gb|AW982785.3|AW982785 HVSMEg0004D09f Hordeum vulgare pre-a... 298 4e-081
gb|BF622414.3|BF622414 HVSMEa0004C23f Hordeum vulgare seedl... 299 1e-080
gb|BG344422.1|BG344422 HVSMEg0009D14f Hordeum vulgare pre-a... 298 2e-080
gb|AJ460382.1|AJ460382 AJ460382 S00002 Hordeum vulgare subs... 298 2e-080
gb|BQ657133.1|BQ657133 HA09I10u HA Hordeum vulgare subsp. v... 298 2e-080
gb|BM377568.2|BM377568 EBem04_SQ003_I13_R embryo, 12 DPA, n... 298 2e-080
gb|BM376611.2|BM376611 EBem05_SQ002_L09_R embryo, 14 DPA, n... 298 2e-080
gb|BI780084.2|BI780084 EBma08_SQ001_F19_R maternal, 28 DPA,... 298 2e-080
gb|BM370559.2|BM370559 EBro08_SQ004_J13_R root, 3 week, dro... 298 2e-080
gb|BQ759446.1|BQ759446 EBpi01_SQ004_E14_R pistil, 1 DPA, no... 298 2e-080
gb|BQ764353.1|BQ764353 EBan01_SQ005_I17_R anther, yellow st... 298 2e-080
gb|BQ767264.1|BQ767264 EBro08_SQ008_M10_R root, 3 week, dro... 298 2e-080
gb|CA030768.1|CA030768 HX08B07r HX Hordeum vulgare subsp. v... 298 2e-080
gb|CV063549.1|CV063549 BNEL90e7 Barley EST endosperm librar... 298 2e-080
gb|CK123864.1|CK123864 BES1824105n20 BES1824 Hordeum vulgar... 298 2e-080
gb|BQ460332.1|BQ460332 HA06I23r HA Hordeum vulgare subsp. v... 298 3e-080
gb|BM101137.2|BM101137 EBpi01_SQ002_P21_R pistil, 1 DPA, no... 298 3e-080
gb|BU977241.1|BU977241 HA11B09u HA Hordeum vulgare subsp. v... 298 3e-080
gb|CB874514.1|CB874514 HX05H22w HX Hordeum vulgare subsp. v... 297 4e-080
gb|BG368111.2|BG368111 HVSMEi0015L14f Hordeum vulgare 20 DA... 297 7e-080
gb|BQ768753.1|BQ768753 EBro08_SQ012_H13_R root, 3 week, dro... 297 7e-080
gb|BF263456.3|BF263456 HV_CEa0006M17f Hordeum vulgare seedl... 296 9e-080
gb|AJ460496.1|AJ460496 AJ460496 S00002 Hordeum vulgare subs... 296 1e-079
gb|BQ470561.1|BQ470561 HX03F15r HX Hordeum vulgare subsp. v... 296 1e-079
gb|BM368114.2|BM368114 EBed01_SQ002_D13_R endosperm, 6 DPA,... 296 1e-079
gb|AV915789.1|AV915789 AV915789 K. Sato unpublished cDNA li... 295 2e-079
gb|BM377528.2|BM377528 EBem04_SQ003_G14_R embryo, 12 DPA, n... 295 2e-079
gb|BQ759429.1|BQ759429 EBpi01_SQ004_B15_R pistil, 1 DPA, no... 294 3e-079
gb|CK125896.1|CK125896 BES1824111B1e11 BES1824 Hordeum vulg... 294 5e-079
gb|BU996456.1|BU996456 HM13K19r HM Hordeum vulgare subsp. v... 290 5e-079
gb|BU980099.1|BU980099 HA18J12r HA Hordeum vulgare subsp. v... 290 5e-079
gb|BQ657240.1|BQ657240 HA09C02u HA Hordeum vulgare subsp. v... 293 6e-079
gb|CA026267.1|CA026267 HZ55G16r HZ Hordeum vulgare subsp. v... 293 6e-079
gb|BJ468272.1|BJ468272 BJ468272 K. Sato unpublished cDNA li... 248 7e-079
gb|BF628987.3|BF628987 HVSMEb0009H03f Hordeum vulgare seedl... 286 5e-078
gb|BM372616.2|BM372616 EBpi05_SQ003_H10_R pistil, 8 DPA, no... 285 2e-077
gb|BF254111.2|BF254111 HVSMEf0003A21f Hordeum vulgare seedl... 286 7e-077
gb|BM097808.2|BM097808 EBem04_SQ002_M06_R embryo, 12 DPA, n... 286 7e-077
gb|BM369172.2|BM369172 EBem07_SQ002_M12_R embryo, 28 DPA, n... 285 3e-076
gb|BU982731.1|BU982731 HA27H03r HA Hordeum vulgare subsp. v... 266 4e-076
gb|CA029887.1|CA029887 HX05H22r HX Hordeum vulgare subsp. v... 266 4e-076
gb|AL507449.1|AL507449 AL507449 Hordeum vulgare Barke devel... 279 1e-075
gb|BM370293.2|BM370293 EBro08_SQ003_L24_R root, 3 week, dro... 281 2e-075
gb|BM443909.2|BM443909 EBem09_SQ002_A06_R embryo, 1 Day ger... 280 6e-075
gb|BJ464005.1|BJ464005 BJ464005 K. Sato unpublished cDNA li... 279 2e-074
gb|BQ665383.1|BQ665383 HX03F15u HX Hordeum vulgare subsp. v... 278 3e-074
gb|BF266984.3|BF266984 HV_CEa0016J21f Hordeum vulgare seedl... 276 8e-074
gb|BM375212.2|BM375212 EBem06_SQ002_L01_R embryo, 21 DPA, n... 276 8e-074
gb|BM096579.2|BM096579 EBma05_SQ001_M21_R maternal, 12 DPA,... 272 2e-073
gb|BM374957.1|BM374957 EBma05_SQ003_M17_R maternal, 12 DPA,... 275 2e-073
gb|BQ459994.1|BQ459994 HA07I10r HA Hordeum vulgare subsp. v... 271 3e-073
gb|BQ657658.1|BQ657658 HA07I10u HA Hordeum vulgare subsp. v... 271 3e-073
gb|AL505608.1|AL505608 AL505608 Hordeum vulgare Barke roots... 229 5e-073
gb|BI948923.1|BI948923 HVSMEl0011H19f Hordeum vulgare spike... 273 7e-073
gb|AJ460493.1|AJ460493 AJ460493 S00002 Hordeum vulgare subs... 273 7e-073
gb|BU974599.1|BU974599 HB28H15r BC Hordeum vulgare subsp. v... 272 1e-072
gb|AV921513.1|AV921513 AV921513 K. Sato unpublished cDNA li... 207 3e-072
gb|BU989673.1|BU989673 HF22G05r HF Hordeum vulgare subsp. v... 266 7e-072
gb|CA016875.1|CA016875 HV05P22u HV Hordeum vulgare subsp. v... 259 2e-071
gb|BI780475.2|BI780475 EBem08_SQ001_F11_R embryo, 40 DPA, n... 267 6e-071
gb|BI777120.2|BI777120 EBro03_SQ002_A15_R root, 3 week, wat... 267 6e-071
gb|CA005304.1|CA005304 HU11C14u HU Hordeum vulgare subsp. v... 265 2e-070
gb|CA008499.1|CA008499 HU11C14r HU Hordeum vulgare subsp. v... 265 2e-070
gb|CB875344.1|CB875344 HX08A07w HX Hordeum vulgare subsp. v... 265 2e-070
gb|BU980000.1|BU980000 HA18C20r HA Hordeum vulgare subsp. v... 263 8e-070
gb|CA004189.1|CA004189 HS16N13r HS Hordeum vulgare subsp. v... 263 8e-070
gb|BU985219.1|BU985219 HF06H23r HF Hordeum vulgare subsp. v... 259 1e-069
gb|CB859428.1|CB859428 HI10G19w HI Hordeum vulgare subsp. v... 261 4e-069
gb|AJ460383.1|AJ460383 AJ460383 S00002 Hordeum vulgare subs... 258 4e-068
gb|BI779133.2|BI779133 EBro01_SQ003_B18_R root, 3 week, hyd... 258 4e-068
gb|CB880518.1|CB880518 HM06M18w HM Hordeum vulgare subsp. v... 258 4e-068
gb|CA005252.1|CA005252 HU11F06u HU Hordeum vulgare subsp. v... 253 5e-068
gb|BU998238.1|BU998238 HI10G19r HI Hordeum vulgare subsp. v... 257 5e-068
gb|BQ754589.1|BQ754589 EBed01_SQ003_D22_R endosperm, 6 DPA,... 255 2e-067
gb|BQ754361.1|BQ754361 EBca01_SQ003_L10_R carpel, pre-anthe... 254 3e-067
gb|BM376688.2|BM376688 EBem05_SQ002_O24_R embryo, 14 DPA, n... 151 2e-066
gb|BJ464965.1|BJ464965 BJ464965 K. Sato unpublished cDNA li... 248 3e-066
gb|BI778891.2|BI778891 EBro01_SQ001_O16_R root, 3 week, hyd... 250 8e-066
gb|AL502869.1|AL502869 AL502869 Hordeum vulgare Barke roots... 236 2e-063
gb|AV920902.1|AV920902 AV920902 K. Sato unpublished cDNA li... 231 2e-061
gb|BU970541.1|BU970541 HB14P08r BC Hordeum vulgare subsp. v... 230 7e-060
gb|AL510695.1|AL510695 AL510695 Hordeum vulgare Barke devel... 222 1e-058
gb|BI777012.2|BI777012 EBpi03_SQ001_K10_R pistil, 4 DPA, no... 225 3e-058
gb|BU983425.1|BU983425 HA29L04r HA Hordeum vulgare subsp. v... 224 4e-058
gb|BG416139.2|BG416139 HVSMEk0009O18f Hordeum vulgare testa... 125 1e-057
gb|AJ460380.1|AJ460380 AJ460380 S00002 Hordeum vulgare subs... 222 1e-057
gb|BQ463146.1|BQ463146 HI04D05r HI Hordeum vulgare subsp. v... 219 2e-056
gb|BI779727.2|BI779727 EBem05_SQ001_F08_R embryo, 14 DPA, n... 218 3e-056
gb|BG414864.2|BG414864 HVSMEk0004A06f Hordeum vulgare testa... 213 5e-056
gb|BJ466271.1|BJ466271 BJ466271 K. Sato unpublished cDNA li... 211 2e-055
gb|BI777222.2|BI777222 EBro03_SQ002_H17_R root, 3 week, wat... 204 7e-052
gb|BQ469967.1|BQ469967 HX01G04T HX Hordeum vulgare subsp. v... 189 1e-048
gb|BE215251.1|BE215251 HV_CEb0006E14f Hordeum vulgare seedl... 122 7e-048
gb|BU974518.1|BU974518 HB28C21r BC Hordeum vulgare subsp. v... 190 9e-048
gb|BU999904.1|BU999904 HS16N13u HS Hordeum vulgare subsp. v... 180 4e-046
gb|CA027160.1|CA027160 HZ58B05r HZ Hordeum vulgare subsp. v... 182 2e-045
gb|BQ664914.1|BQ664914 HX01G04w HX Hordeum vulgare subsp. v... 170 4e-043
gb|BQ757335.1|BQ757335 EBem10_SQ003_M04_R embryo, 2 Day ger... 174 6e-043
gb|BQ764041.1|BQ764041 EBro03_SQ006_I05_R root, 3 week, wat... 164 5e-040
gb|BU967526.1|BU967526 HB04J10r BC Hordeum vulgare subsp. v... 159 1e-039
gb|BQ755962.1|BQ755962 EBem04_SQ004_F16_R embryo, 12 DPA, n... 155 2e-037
gb|CK123629.1|CK123629 BES1824104m06 BES1824 Hordeum vulgar... 148 3e-035
gb|AV914889.1|AV914889 AV914889 K. Sato unpublished cDNA li... 143 5e-035
gb|AJ460539.1|AJ460539 AJ460539 S00002 Hordeum vulgare subs... 145 2e-034
gb|BM444780.1|BM444780 EBem09_SQ006_H06_R embryo, 1 Day ger... 144 8e-034
gb|AJ460381.1|AJ460381 AJ460381 S00002 Hordeum vulgare subs... 143 1e-033
gb|CK123577.1|CK123577 BES1824104i09 BES1824 Hordeum vulgar... 133 1e-030
gb|AJ460494.1|AJ460494 AJ460494 S00002 Hordeum vulgare subs... 132 1e-029
gb|AJ460538.1|AJ460538 AJ460538 S00002 Hordeum vulgare subs... 122 3e-027
gb|BM377344.1|BM377344 EBem05_SQ004_N13_R embryo, 14 DPA, n... 115 4e-025
gb|BM441401.2|BM441401 EBma05_SQ004_C12_R maternal, 12 DPA,... 107 9e-023
gb|BM368821.1|BM368821 EBem08_SQ004_L05_R embryo, 40 DPA, n... 84 2e-022
>gb|BQ766935.1|BQ766935 EBro08_SQ007_D15_R root, 3 week, drought-stressed, cv Optic, EBro08
Hordeum vulgare subsp. vulgare cDNA clone
EBro08_SQ007_D15 5', mRNA sequence
Length = 728
Score = 307 bits (664), Expect(2) = 6e-084
Identities = 132/142 (92%), Positives = 136/142 (95%)
Frame = +3 / +2
Query: 60 AATATARMPFKRFVEIGRVALVNYGKDYGRLVVIVDVVDQNRALVDAPDMVRCQVNFKRL 239
AA A A+MPFKRFVEIGRVALVNYGKDYGRLVVIVDVVDQNRALVDAPDM+RCQ+NFKRL
Sbjct: 38 AAAAAAKMPFKRFVEIGRVALVNYGKDYGRLVVIVDVVDQNRALVDAPDMIRCQMNFKRL 217
Query: 240 SLTDIKIDIKRVPKKTTLIKAMEEADVKTKWENSSWGKKLIVQKRRASLNDFDRFKVMLA 419
SLTDIKIDIKR+PKK TLIKAMEEADVKTKWENSSWGKKLIVQKRRASLNDFDRFKVMLA
Sbjct: 218 SLTDIKIDIKRIPKKATLIKAMEEADVKTKWENSSWGKKLIVQKRRASLNDFDRFKVMLA 397
Query: 420 KIKRGGAIRQELAKLKKASTA* 485
KIKRGGAIRQELAKLKK A*
Sbjct: 398 KIKRGGAIRQELAKLKKEVAA* 463
Score = 243 bits (525), Expect(2) = 8e-070
Identities = 113/142 (79%), Positives = 117/142 (82%)
Frame = -3 / -3
Query: 484 *AVDAFLSLASSCLIAPPLLIFASMTLNLSKSLSDALLFWTISFLPHELFSHLVFTSASS 305
*A +FLSLASSCLIAPPLLI A+MTLNLSKS SDALLF TISFLP ELFSHLVFTSASS
Sbjct: 462 *AATSFLSLASSCLIAPPLLILANMTLNLSKSFSDALLF*TISFLPQELFSHLVFTSASS 283
Query: 304 IALIRVVFLGTRLMSILMSVSESRLKFTWHLTISGASTSALFWXXXXXXXXXRP*SFP*F 125
+ALI+V FLG RLMSILMSVSE RLKF WHL ISGASTSA FW RP*S P*F
Sbjct: 282 MALIKVAFLGIRLMSILMSVSERRLKFIWHLIISGASTSARFWSTTSTMTTRRP*SLP*F 103
Query: 124 TRATRPISTNLLNGILAVAVAA 59
TRATRPISTNLLNGI A A AA
Sbjct: 102 TRATRPISTNLLNGIFAAAAAA 37
Score = 233 bits (503), Expect(2) = 2e-061
Identities = 97/146 (66%), Positives = 110/146 (75%)
Frame = -2 / -2
Query: 485 LSCGRLLKLGELLPDSTTPLNLRQHDFEPIKVIERCSPLLDNQXXXXXXXXXXXLHISFL 306
LS LL+LG+LLPDSTTPLNL QHD EP+KVI+RCS LL+N+ HISFL
Sbjct: 463 LSSNLLLELGKLLPDSTTPLNLSQHDLEPVKVIQRCSSLLNNKLLAPGAVLPFGFHISFL 284
Query: 305 HRLDQGCLLGDTFDVNLDVSK*EPLEVHLAPDHIRGIHKCPVLVDHIDDDDETAIVLPVV 126
H LDQ CL GDT DVNLDV +*+ LEVHLAPDHIR + +CPVLVD +DDDDE A+VL VV
Sbjct: 283 HGLDQSCLFGDTLDVNLDVGQ*KTLEVHLAPDHIRSVDECPVLVDDVDDDDEAAVVLAVV 104
Query: 125 HQGHAPDLHEPLERHPRGGGGGAVKR 48
HQGH PDL EPLERH GG GG +R
Sbjct: 103 HQGHPPDLDEPLERHLCGGCGGGEER 26
Score = 207 bits (446), Expect = 7e-053
Identities = 95/133 (71%), Positives = 104/133 (78%)
Frame = +2 / +1
Query: 74 REDAVQEVRGDRARGPGELREGLWPSRRHRRCGRPEQGTCGCP*YGQVPGELQAALTY*H 253
R+DAVQEVR DRA GPGELR+GL P RRHRR RPE GT *Y QVP ELQA+ T H
Sbjct: 52 RKDAVQEVRRDRAGGPGELRQGLRPPRRHRRRRRPEPGTRRRS*YDQVPDELQASFTDRH 231
Query: 254 QD*HQTCPQEDNPDQGDGGS*CEDQVGEQLMGQEADCPEEESIAQ*L**VQSHAGED*EG 433
QD*HQ PQ+ N DQG GGS*CE+Q+GEQL+GQEA C EE+SIA+*L* VQ H G D*EG
Sbjct: 232 QD*HQAYPQKGNFDQGHGGS*CENQMGEQLLGQEAYCSEEKSIAE*L*QVQGHVG*D*EG 411
Query: 434 WCYQARARQA*EG 472
WCYQARA QA EG
Sbjct: 412 WCYQARACQAQEG 450
Score = 95.9 bits (203), Expect(2) = 2e-029
Identities = 44/59 (74%), Positives = 48/59 (81%)
Frame = +1 / +3
Query: 310 KLM*RPSGRTAHGARS*LSRRGEHRSMTLIGSKSCWRRLRGVVLSGKSSPSLRRRPQLK 486
KLM*+P+GRTA GARS L RR EHR MTL GS+SCW RLRGVVLSGKS PS RRR L+
Sbjct: 288 KLM*KPNGRTAPGARSLLFRREEHR*MTLTGSRSCWLRLRGVVLSGKSLPSSRRRLLLR 464
Score = 52.8 bits (109), Expect(2) = 2e-029
Identities = 30/50 (60%), Positives = 31/50 (62%)
Frame = +1 / +3
Query: 124 *TTGRTMAVXXXXXMWSTRTGHLWMPLIWSGAR*TSSGSHLLTSRLTSNV 273
*TT RT A STRTGH LI SGAR*TSS H TSRLTS+V
Sbjct: 102 *TTARTTAASSSSSTSSTRTGHSSTLLI*SGAR*TSSVFH*PTSRLTSSV 251
Score = 40.9 bits (83), Expect(2) = 8e-070
Identities = 17/32 (53%), Positives = 23/32 (71%)
Frame = -1 / -1
Query: 609 DKV*NGFTGNILVTLALTTLNRIADPTHNQKL 514
+K+*N F +++TLAL TL ADPT N+KL
Sbjct: 584 EKI*NSFLKTVVLTLALRTLEHRADPTWNKKL 489
Score = 24.4 bits (47), Expect(2) = 6e-084
Identities = 12/20 (60%), Positives = 15/20 (75%)
Frame = +2 / +1
Query: 515 SFWL*VGSAIRLSVVKARVT 574
SF VGSA+ SV+KARV+
Sbjct: 490 SFLFQVGSALCSSVLKARVS 549
Score = 23.1 bits (44), Expect(2) = 2e-061
Identities = 14/31 (45%), Positives = 19/31 (61%)
Frame = -2 / -2
Query: 605 KFEMGSQGTYW*LWL*QRSIELLIQLITKNS 513
++E+ S +*LWL*+ IQL TKNS
Sbjct: 580 RYEIVS*KQLY*LWL*EHWNIEQIQLGTKNS 488
>gb|BQ762662.1|BQ762662 EBro02_SQ004_L15_R root, 3 week, hydroponic grown, low nitrogen, cv
Optic, EBro02 Hordeum vulgare subsp. vulgare cDNA clone
EBro02_SQ004_L15 5', mRNA sequence
Length = 621
Score = 307 bits (664), Expect(2) = 6e-084
Identities = 132/142 (92%), Positives = 136/142 (95%)
Frame = +3 / +1
Query: 60 AATATARMPFKRFVEIGRVALVNYGKDYGRLVVIVDVVDQNRALVDAPDMVRCQVNFKRL 239
AA A A+MPFKRFVEIGRVALVNYGKDYGRLVVIVDVVDQNRALVDAPDM+RCQ+NFKRL
Sbjct: 31 AAAAAAKMPFKRFVEIGRVALVNYGKDYGRLVVIVDVVDQNRALVDAPDMIRCQMNFKRL 210
Query: 240 SLTDIKIDIKRVPKKTTLIKAMEEADVKTKWENSSWGKKLIVQKRRASLNDFDRFKVMLA 419
SLTDIKIDIKR+PKK TLIKAMEEADVKTKWENSSWGKKLIVQKRRASLNDFDRFKVMLA
Sbjct: 211 SLTDIKIDIKRIPKKATLIKAMEEADVKTKWENSSWGKKLIVQKRRASLNDFDRFKVMLA 390
Query: 420 KIKRGGAIRQELAKLKKASTA* 485
KIKRGGAIRQELAKLKK A*
Sbjct: 391 KIKRGGAIRQELAKLKKEVAA* 456
Score = 243 bits (525), Expect(2) = 8e-070
Identities = 113/142 (79%), Positives = 117/142 (82%)
Frame = -3 / -2
Query: 484 *AVDAFLSLASSCLIAPPLLIFASMTLNLSKSLSDALLFWTISFLPHELFSHLVFTSASS 305
*A +FLSLASSCLIAPPLLI A+MTLNLSKS SDALLF TISFLP ELFSHLVFTSASS
Sbjct: 455 *AATSFLSLASSCLIAPPLLILANMTLNLSKSFSDALLF*TISFLPQELFSHLVFTSASS 276
Query: 304 IALIRVVFLGTRLMSILMSVSESRLKFTWHLTISGASTSALFWXXXXXXXXXRP*SFP*F 125
+ALI+V FLG RLMSILMSVSE RLKF WHL ISGASTSA FW RP*S P*F
Sbjct: 275 MALIKVAFLGIRLMSILMSVSERRLKFIWHLIISGASTSARFWSTTSTMTTRRP*SLP*F 96
Query: 124 TRATRPISTNLLNGILAVAVAA 59
TRATRPISTNLLNGI A A AA
Sbjct: 95 TRATRPISTNLLNGIFAAAAAA 30
Score = 233 bits (503), Expect(2) = 2e-061
Identities = 97/146 (66%), Positives = 110/146 (75%)
Frame = -2 / -1
Query: 485 LSCGRLLKLGELLPDSTTPLNLRQHDFEPIKVIERCSPLLDNQXXXXXXXXXXXLHISFL 306
LS LL+LG+LLPDSTTPLNL QHD EP+KVI+RCS LL+N+ HISFL
Sbjct: 456 LSSNLLLELGKLLPDSTTPLNLSQHDLEPVKVIQRCSSLLNNKLLAPGAVLPFGFHISFL 277
Query: 305 HRLDQGCLLGDTFDVNLDVSK*EPLEVHLAPDHIRGIHKCPVLVDHIDDDDETAIVLPVV 126
H LDQ CL GDT DVNLDV +*+ LEVHLAPDHIR + +CPVLVD +DDDDE A+VL VV
Sbjct: 276 HGLDQSCLFGDTLDVNLDVGQ*KTLEVHLAPDHIRSVDECPVLVDDVDDDDEAAVVLAVV 97
Query: 125 HQGHAPDLHEPLERHPRGGGGGAVKR 48
HQGH PDL EPLERH GG GG +R
Sbjct: 96 HQGHPPDLDEPLERHLCGGCGGGEER 19
Score = 207 bits (446), Expect = 7e-053
Identities = 95/133 (71%), Positives = 104/133 (78%)
Frame = +2 / +3
Query: 74 REDAVQEVRGDRARGPGELREGLWPSRRHRRCGRPEQGTCGCP*YGQVPGELQAALTY*H 253
R+DAVQEVR DRA GPGELR+GL P RRHRR RPE GT *Y QVP ELQA+ T H
Sbjct: 45 RKDAVQEVRRDRAGGPGELRQGLRPPRRHRRRRRPEPGTRRRS*YDQVPDELQASFTDRH 224
Query: 254 QD*HQTCPQEDNPDQGDGGS*CEDQVGEQLMGQEADCPEEESIAQ*L**VQSHAGED*EG 433
QD*HQ PQ+ N DQG GGS*CE+Q+GEQL+GQEA C EE+SIA+*L* VQ H G D*EG
Sbjct: 225 QD*HQAYPQKGNFDQGHGGS*CENQMGEQLLGQEAYCSEEKSIAE*L*QVQGHVG*D*EG 404
Query: 434 WCYQARARQA*EG 472
WCYQARA QA EG
Sbjct: 405 WCYQARACQAQEG 443
Score = 95.9 bits (203), Expect(2) = 2e-029
Identities = 44/59 (74%), Positives = 48/59 (81%)
Frame = +1 / +2
Query: 310 KLM*RPSGRTAHGARS*LSRRGEHRSMTLIGSKSCWRRLRGVVLSGKSSPSLRRRPQLK 486
KLM*+P+GRTA GARS L RR EHR MTL GS+SCW RLRGVVLSGKS PS RRR L+
Sbjct: 281 KLM*KPNGRTAPGARSLLFRREEHR*MTLTGSRSCWLRLRGVVLSGKSLPSSRRRLLLR 457
Score = 52.8 bits (109), Expect(2) = 2e-029
Identities = 30/50 (60%), Positives = 31/50 (62%)
Frame = +1 / +2
Query: 124 *TTGRTMAVXXXXXMWSTRTGHLWMPLIWSGAR*TSSGSHLLTSRLTSNV 273
*TT RT A STRTGH LI SGAR*TSS H TSRLTS+V
Sbjct: 95 *TTARTTAASSSSSTSSTRTGHSSTLLI*SGAR*TSSVFH*PTSRLTSSV 244
Score = 40.9 bits (83), Expect(2) = 8e-070
Identities = 17/32 (53%), Positives = 23/32 (71%)
Frame = -1 / -3
Query: 609 DKV*NGFTGNILVTLALTTLNRIADPTHNQKL 514
+K+*N F +++TLAL TL ADPT N+KL
Sbjct: 577 EKI*NSFLKTVVLTLALRTLEHRADPTWNKKL 482
Score = 24.4 bits (47), Expect(2) = 6e-084
Identities = 12/20 (60%), Positives = 15/20 (75%)
Frame = +2 / +3
Query: 515 SFWL*VGSAIRLSVVKARVT 574
SF VGSA+ SV+KARV+
Sbjct: 483 SFLFQVGSALCSSVLKARVS 542
Score = 23.1 bits (44), Expect(2) = 2e-061
Identities = 14/31 (45%), Positives = 19/31 (61%)
Frame = -2 / -1
Query: 605 KFEMGSQGTYW*LWL*QRSIELLIQLITKNS 513
++E+ S +*LWL*+ IQL TKNS
Sbjct: 573 RYEIVS*KQLY*LWL*EHWNIEQIQLGTKNS 481
>gb|BQ764226.1|BQ764226 EBan01_SQ005_A12_R anther, yellow stage, no treatment, cv Optic,
EBan01 Hordeum vulgare subsp. vulgare cDNA clone
EBan01_SQ005_A12 5', mRNA sequence
Length = 620
Score = 307 bits (664), Expect(2) = 6e-084
Identities = 132/142 (92%), Positives = 136/142 (95%)
Frame = +3 / +3
Query: 60 AATATARMPFKRFVEIGRVALVNYGKDYGRLVVIVDVVDQNRALVDAPDMVRCQVNFKRL 239
AA A A+MPFKRFVEIGRVALVNYGKDYGRLVVIVDVVDQNRALVDAPDM+RCQ+NFKRL
Sbjct: 27 AAAAAAKMPFKRFVEIGRVALVNYGKDYGRLVVIVDVVDQNRALVDAPDMIRCQMNFKRL 206
Query: 240 SLTDIKIDIKRVPKKTTLIKAMEEADVKTKWENSSWGKKLIVQKRRASLNDFDRFKVMLA 419
SLTDIKIDIKR+PKK TLIKAMEEADVKTKWENSSWGKKLIVQKRRASLNDFDRFKVMLA
Sbjct: 207 SLTDIKIDIKRIPKKATLIKAMEEADVKTKWENSSWGKKLIVQKRRASLNDFDRFKVMLA 386
Query: 420 KIKRGGAIRQELAKLKKASTA* 485
KIKRGGAIRQELAKLKK A*
Sbjct: 387 KIKRGGAIRQELAKLKKEVAA* 452
Score = 243 bits (525), Expect(2) = 8e-070
Identities = 113/142 (79%), Positives = 117/142 (82%)
Frame = -3 / -2
Query: 484 *AVDAFLSLASSCLIAPPLLIFASMTLNLSKSLSDALLFWTISFLPHELFSHLVFTSASS 305
*A +FLSLASSCLIAPPLLI A+MTLNLSKS SDALLF TISFLP ELFSHLVFTSASS
Sbjct: 451 *AATSFLSLASSCLIAPPLLILANMTLNLSKSFSDALLF*TISFLPQELFSHLVFTSASS 272
Query: 304 IALIRVVFLGTRLMSILMSVSESRLKFTWHLTISGASTSALFWXXXXXXXXXRP*SFP*F 125
+ALI+V FLG RLMSILMSVSE RLKF WHL ISGASTSA FW RP*S P*F
Sbjct: 271 MALIKVAFLGIRLMSILMSVSERRLKFIWHLIISGASTSARFWSTTSTMTTRRP*SLP*F 92
Query: 124 TRATRPISTNLLNGILAVAVAA 59
TRATRPISTNLLNGI A A AA
Sbjct: 91 TRATRPISTNLLNGIFAAAAAA 26
Score = 233 bits (503), Expect(2) = 2e-061
Identities = 97/146 (66%), Positives = 110/146 (75%)
Frame = -2 / -1
Query: 485 LSCGRLLKLGELLPDSTTPLNLRQHDFEPIKVIERCSPLLDNQXXXXXXXXXXXLHISFL 306
LS LL+LG+LLPDSTTPLNL QHD EP+KVI+RCS LL+N+ HISFL
Sbjct: 452 LSSNLLLELGKLLPDSTTPLNLSQHDLEPVKVIQRCSSLLNNKLLAPGAVLPFGFHISFL 273
Query: 305 HRLDQGCLLGDTFDVNLDVSK*EPLEVHLAPDHIRGIHKCPVLVDHIDDDDETAIVLPVV 126
H LDQ CL GDT DVNLDV +*+ LEVHLAPDHIR + +CPVLVD +DDDDE A+VL VV
Sbjct: 272 HGLDQSCLFGDTLDVNLDVGQ*KTLEVHLAPDHIRSVDECPVLVDDVDDDDEAAVVLAVV 93
Query: 125 HQGHAPDLHEPLERHPRGGGGGAVKR 48
HQGH PDL EPLERH GG GG +R
Sbjct: 92 HQGHPPDLDEPLERHLCGGCGGGEER 15
Score = 207 bits (446), Expect = 7e-053
Identities = 95/133 (71%), Positives = 104/133 (78%)
Frame = +2 / +2
Query: 74 REDAVQEVRGDRARGPGELREGLWPSRRHRRCGRPEQGTCGCP*YGQVPGELQAALTY*H 253
R+DAVQEVR DRA GPGELR+GL P RRHRR RPE GT *Y QVP ELQA+ T H
Sbjct: 41 RKDAVQEVRRDRAGGPGELRQGLRPPRRHRRRRRPEPGTRRRS*YDQVPDELQASFTDRH 220
Query: 254 QD*HQTCPQEDNPDQGDGGS*CEDQVGEQLMGQEADCPEEESIAQ*L**VQSHAGED*EG 433
QD*HQ PQ+ N DQG GGS*CE+Q+GEQL+GQEA C EE+SIA+*L* VQ H G D*EG
Sbjct: 221 QD*HQAYPQKGNFDQGHGGS*CENQMGEQLLGQEAYCSEEKSIAE*L*QVQGHVG*D*EG 400
Query: 434 WCYQARARQA*EG 472
WCYQARA QA EG
Sbjct: 401 WCYQARACQAQEG 439
Score = 95.9 bits (203), Expect(2) = 2e-029
Identities = 44/59 (74%), Positives = 48/59 (81%)
Frame = +1 / +1
Query: 310 KLM*RPSGRTAHGARS*LSRRGEHRSMTLIGSKSCWRRLRGVVLSGKSSPSLRRRPQLK 486
KLM*+P+GRTA GARS L RR EHR MTL GS+SCW RLRGVVLSGKS PS RRR L+
Sbjct: 277 KLM*KPNGRTAPGARSLLFRREEHR*MTLTGSRSCWLRLRGVVLSGKSLPSSRRRLLLR 453
Score = 52.8 bits (109), Expect(2) = 2e-029
Identities = 30/50 (60%), Positives = 31/50 (62%)
Frame = +1 / +1
Query: 124 *TTGRTMAVXXXXXMWSTRTGHLWMPLIWSGAR*TSSGSHLLTSRLTSNV 273
*TT RT A STRTGH LI SGAR*TSS H TSRLTS+V
Sbjct: 91 *TTARTTAASSSSSTSSTRTGHSSTLLI*SGAR*TSSVFH*PTSRLTSSV 240
Score = 40.9 bits (83), Expect(2) = 8e-070
Identities = 17/32 (53%), Positives = 23/32 (71%)
Frame = -1 / -3
Query: 609 DKV*NGFTGNILVTLALTTLNRIADPTHNQKL 514
+K+*N F +++TLAL TL ADPT N+KL
Sbjct: 573 EKI*NSFLKTVVLTLALRTLEHRADPTWNKKL 478
Score = 24.4 bits (47), Expect(2) = 6e-084
Identities = 12/20 (60%), Positives = 15/20 (75%)
Frame = +2 / +2
Query: 515 SFWL*VGSAIRLSVVKARVT 574
SF VGSA+ SV+KARV+
Sbjct: 479 SFLFQVGSALCSSVLKARVS 538
Score = 23.1 bits (44), Expect(2) = 2e-061
Identities = 14/31 (45%), Positives = 19/31 (61%)
Frame = -2 / -1
Query: 605 KFEMGSQGTYW*LWL*QRSIELLIQLITKNS 513
++E+ S +*LWL*+ IQL TKNS
Sbjct: 569 RYEIVS*KQLY*LWL*EHWNIEQIQLGTKNS 477
>gb|BI780787.2|BI780787 EBes01_SQ002_D08_R embryo sac, 4-6 DPA, no treatment, cv Optic,
EBes01 Hordeum vulgare subsp. vulgare cDNA clone
EBes01_SQ002_D08 5', mRNA sequence
Length = 618
Score = 307 bits (664), Expect(2) = 6e-084
Identities = 132/142 (92%), Positives = 136/142 (95%)
Frame = +3 / +2
Query: 60 AATATARMPFKRFVEIGRVALVNYGKDYGRLVVIVDVVDQNRALVDAPDMVRCQVNFKRL 239
AA A A+MPFKRFVEIGRVALVNYGKDYGRLVVIVDVVDQNRALVDAPDM+RCQ+NFKRL
Sbjct: 29 AAAAAAKMPFKRFVEIGRVALVNYGKDYGRLVVIVDVVDQNRALVDAPDMIRCQMNFKRL 208
Query: 240 SLTDIKIDIKRVPKKTTLIKAMEEADVKTKWENSSWGKKLIVQKRRASLNDFDRFKVMLA 419
SLTDIKIDIKR+PKK TLIKAMEEADVKTKWENSSWGKKLIVQKRRASLNDFDRFKVMLA
Sbjct: 209 SLTDIKIDIKRIPKKATLIKAMEEADVKTKWENSSWGKKLIVQKRRASLNDFDRFKVMLA 388
Query: 420 KIKRGGAIRQELAKLKKASTA* 485
KIKRGGAIRQELAKLKK A*
Sbjct: 389 KIKRGGAIRQELAKLKKEVAA* 454
Score = 243 bits (525), Expect(2) = 8e-070
Identities = 113/142 (79%), Positives = 117/142 (82%)
Frame = -3 / -1
Query: 484 *AVDAFLSLASSCLIAPPLLIFASMTLNLSKSLSDALLFWTISFLPHELFSHLVFTSASS 305
*A +FLSLASSCLIAPPLLI A+MTLNLSKS SDALLF TISFLP ELFSHLVFTSASS
Sbjct: 453 *AATSFLSLASSCLIAPPLLILANMTLNLSKSFSDALLF*TISFLPQELFSHLVFTSASS 274
Query: 304 IALIRVVFLGTRLMSILMSVSESRLKFTWHLTISGASTSALFWXXXXXXXXXRP*SFP*F 125
+ALI+V FLG RLMSILMSVSE RLKF WHL ISGASTSA FW RP*S P*F
Sbjct: 273 MALIKVAFLGIRLMSILMSVSERRLKFIWHLIISGASTSARFWSTTSTMTTRRP*SLP*F 94
Query: 124 TRATRPISTNLLNGILAVAVAA 59
TRATRPISTNLLNGI A A AA
Sbjct: 93 TRATRPISTNLLNGIFAAAAAA 28
Score = 233 bits (503), Expect(2) = 2e-061
Identities = 97/146 (66%), Positives = 110/146 (75%)
Frame = -2 / -3
Query: 485 LSCGRLLKLGELLPDSTTPLNLRQHDFEPIKVIERCSPLLDNQXXXXXXXXXXXLHISFL 306
LS LL+LG+LLPDSTTPLNL QHD EP+KVI+RCS LL+N+ HISFL
Sbjct: 454 LSSNLLLELGKLLPDSTTPLNLSQHDLEPVKVIQRCSSLLNNKLLAPGAVLPFGFHISFL 275
Query: 305 HRLDQGCLLGDTFDVNLDVSK*EPLEVHLAPDHIRGIHKCPVLVDHIDDDDETAIVLPVV 126
H LDQ CL GDT DVNLDV +*+ LEVHLAPDHIR + +CPVLVD +DDDDE A+VL VV
Sbjct: 274 HGLDQSCLFGDTLDVNLDVGQ*KTLEVHLAPDHIRSVDECPVLVDDVDDDDEAAVVLAVV 95
Query: 125 HQGHAPDLHEPLERHPRGGGGGAVKR 48
HQGH PDL EPLERH GG GG +R
Sbjct: 94 HQGHPPDLDEPLERHLCGGCGGGEER 17
Score = 207 bits (446), Expect = 7e-053
Identities = 95/133 (71%), Positives = 104/133 (78%)
Frame = +2 / +1
Query: 74 REDAVQEVRGDRARGPGELREGLWPSRRHRRCGRPEQGTCGCP*YGQVPGELQAALTY*H 253
R+DAVQEVR DRA GPGELR+GL P RRHRR RPE GT *Y QVP ELQA+ T H
Sbjct: 43 RKDAVQEVRRDRAGGPGELRQGLRPPRRHRRRRRPEPGTRRRS*YDQVPDELQASFTDRH 222
Query: 254 QD*HQTCPQEDNPDQGDGGS*CEDQVGEQLMGQEADCPEEESIAQ*L**VQSHAGED*EG 433
QD*HQ PQ+ N DQG GGS*CE+Q+GEQL+GQEA C EE+SIA+*L* VQ H G D*EG
Sbjct: 223 QD*HQAYPQKGNFDQGHGGS*CENQMGEQLLGQEAYCSEEKSIAE*L*QVQGHVG*D*EG 402
Query: 434 WCYQARARQA*EG 472
WCYQARA QA EG
Sbjct: 403 WCYQARACQAQEG 441
Score = 95.9 bits (203), Expect(2) = 2e-029
Identities = 44/59 (74%), Positives = 48/59 (81%)
Frame = +1 / +3
Query: 310 KLM*RPSGRTAHGARS*LSRRGEHRSMTLIGSKSCWRRLRGVVLSGKSSPSLRRRPQLK 486
KLM*+P+GRTA GARS L RR EHR MTL GS+SCW RLRGVVLSGKS PS RRR L+
Sbjct: 279 KLM*KPNGRTAPGARSLLFRREEHR*MTLTGSRSCWLRLRGVVLSGKSLPSSRRRLLLR 455
Score = 52.8 bits (109), Expect(2) = 2e-029
Identities = 30/50 (60%), Positives = 31/50 (62%)
Frame = +1 / +3
Query: 124 *TTGRTMAVXXXXXMWSTRTGHLWMPLIWSGAR*TSSGSHLLTSRLTSNV 273
*TT RT A STRTGH LI SGAR*TSS H TSRLTS+V
Sbjct: 93 *TTARTTAASSSSSTSSTRTGHSSTLLI*SGAR*TSSVFH*PTSRLTSSV 242
Score = 40.9 bits (83), Expect(2) = 8e-070
Identities = 17/32 (53%), Positives = 23/32 (71%)
Frame = -1 / -2
Query: 609 DKV*NGFTGNILVTLALTTLNRIADPTHNQKL 514
+K+*N F +++TLAL TL ADPT N+KL
Sbjct: 575 EKI*NSFLKTVVLTLALRTLEHRADPTWNKKL 480
Score = 24.4 bits (47), Expect(2) = 6e-084
Identities = 12/20 (60%), Positives = 15/20 (75%)
Frame = +2 / +1
Query: 515 SFWL*VGSAIRLSVVKARVT 574
SF VGSA+ SV+KARV+
Sbjct: 481 SFLFQVGSALCSSVLKARVS 540
Score = 23.1 bits (44), Expect(2) = 2e-061
Identities = 14/31 (45%), Positives = 19/31 (61%)
Frame = -2 / -3
Query: 605 KFEMGSQGTYW*LWL*QRSIELLIQLITKNS 513
++E+ S +*LWL*+ IQL TKNS
Sbjct: 571 RYEIVS*KQLY*LWL*EHWNIEQIQLGTKNS 479
>gb|BM101365.2|BM101365 EBpi01_SQ003_K07_R pistil, 1 DPA, no treatment, cv Optic, EBpi01
Hordeum vulgare subsp. vulgare cDNA clone
EBpi01_SQ003_K07 5', mRNA sequence
Length = 584
Score = 307 bits (664), Expect(2) = 6e-084
Identities = 132/142 (92%), Positives = 136/142 (95%)
Frame = +3 / +1
Query: 60 AATATARMPFKRFVEIGRVALVNYGKDYGRLVVIVDVVDQNRALVDAPDMVRCQVNFKRL 239
AA A A+MPFKRFVEIGRVALVNYGKDYGRLVVIVDVVDQNRALVDAPDM+RCQ+NFKRL
Sbjct: 28 AAAAAAKMPFKRFVEIGRVALVNYGKDYGRLVVIVDVVDQNRALVDAPDMIRCQMNFKRL 207
Query: 240 SLTDIKIDIKRVPKKTTLIKAMEEADVKTKWENSSWGKKLIVQKRRASLNDFDRFKVMLA 419
SLTDIKIDIKR+PKK TLIKAMEEADVKTKWENSSWGKKLIVQKRRASLNDFDRFKVMLA
Sbjct: 208 SLTDIKIDIKRIPKKATLIKAMEEADVKTKWENSSWGKKLIVQKRRASLNDFDRFKVMLA 387
Query: 420 KIKRGGAIRQELAKLKKASTA* 485
KIKRGGAIRQELAKLKK A*
Sbjct: 388 KIKRGGAIRQELAKLKKEVAA* 453
Score = 243 bits (525), Expect(2) = 8e-070
Identities = 113/142 (79%), Positives = 117/142 (82%)
Frame = -3 / -1
Query: 484 *AVDAFLSLASSCLIAPPLLIFASMTLNLSKSLSDALLFWTISFLPHELFSHLVFTSASS 305
*A +FLSLASSCLIAPPLLI A+MTLNLSKS SDALLF TISFLP ELFSHLVFTSASS
Sbjct: 452 *AATSFLSLASSCLIAPPLLILANMTLNLSKSFSDALLF*TISFLPQELFSHLVFTSASS 273
Query: 304 IALIRVVFLGTRLMSILMSVSESRLKFTWHLTISGASTSALFWXXXXXXXXXRP*SFP*F 125
+ALI+V FLG RLMSILMSVSE RLKF WHL ISGASTSA FW RP*S P*F
Sbjct: 272 MALIKVAFLGIRLMSILMSVSERRLKFIWHLIISGASTSARFWSTTSTMTTRRP*SLP*F 93
Query: 124 TRATRPISTNLLNGILAVAVAA 59
TRATRPISTNLLNGI A A AA
Sbjct: 92 TRATRPISTNLLNGIFAAAAAA 27
Score = 233 bits (503), Expect(2) = 2e-061
Identities = 97/146 (66%), Positives = 110/146 (75%)
Frame = -2 / -3
Query: 485 LSCGRLLKLGELLPDSTTPLNLRQHDFEPIKVIERCSPLLDNQXXXXXXXXXXXLHISFL 306
LS LL+LG+LLPDSTTPLNL QHD EP+KVI+RCS LL+N+ HISFL
Sbjct: 453 LSSNLLLELGKLLPDSTTPLNLSQHDLEPVKVIQRCSSLLNNKLLAPGAVLPFGFHISFL 274
Query: 305 HRLDQGCLLGDTFDVNLDVSK*EPLEVHLAPDHIRGIHKCPVLVDHIDDDDETAIVLPVV 126
H LDQ CL GDT DVNLDV +*+ LEVHLAPDHIR + +CPVLVD +DDDDE A+VL VV
Sbjct: 273 HGLDQSCLFGDTLDVNLDVGQ*KTLEVHLAPDHIRSVDECPVLVDDVDDDDEAAVVLAVV 94
Query: 125 HQGHAPDLHEPLERHPRGGGGGAVKR 48
HQGH PDL EPLERH GG GG +R
Sbjct: 93 HQGHPPDLDEPLERHLCGGCGGGEER 16
Score = 207 bits (447), Expect = 5e-053
Identities = 97/140 (69%), Positives = 107/140 (76%)
Frame = +2 / +3
Query: 74 REDAVQEVRGDRARGPGELREGLWPSRRHRRCGRPEQGTCGCP*YGQVPGELQAALTY*H 253
R+DAVQEVR DRA GPGELR+GL P RRHRR RPE GT *Y QVP ELQA+ T H
Sbjct: 42 RKDAVQEVRRDRAGGPGELRQGLRPPRRHRRRRRPEPGTRRRS*YDQVPDELQASFTDRH 221
Query: 254 QD*HQTCPQEDNPDQGDGGS*CEDQVGEQLMGQEADCPEEESIAQ*L**VQSHAGED*EG 433
QD*HQ PQ+ N DQG GGS*CE+Q+GEQL+GQEA C EE+SIA+*L* VQ H G D*EG
Sbjct: 222 QD*HQAYPQKGNFDQGHGGS*CENQMGEQLLGQEAYCSEEKSIAE*L*QVQGHVG*D*EG 401
Query: 434 WCYQARARQA*EGVHSLRSL 493
WCYQARA QA EG L+ L
Sbjct: 402 WCYQARACQAQEGGCCLKYL 461
Score = 97.3 bits (206), Expect(2) = 1e-029
Identities = 45/59 (76%), Positives = 48/59 (81%)
Frame = +1 / +2
Query: 310 KLM*RPSGRTAHGARS*LSRRGEHRSMTLIGSKSCWRRLRGVVLSGKSSPSLRRRPQLK 486
KLM*+P+GRTA GARS L RR EHR MTL GS+SCW RLRGVVLSGKS PS RRR LK
Sbjct: 278 KLM*KPNGRTAPGARSLLFRREEHR*MTLTGSRSCWLRLRGVVLSGKSLPSSRRRLLLK 454
Score = 52.8 bits (109), Expect(2) = 1e-029
Identities = 30/50 (60%), Positives = 31/50 (62%)
Frame = +1 / +2
Query: 124 *TTGRTMAVXXXXXMWSTRTGHLWMPLIWSGAR*TSSGSHLLTSRLTSNV 273
*TT RT A STRTGH LI SGAR*TSS H TSRLTS+V
Sbjct: 92 *TTARTTAASSSSSTSSTRTGHSSTLLI*SGAR*TSSVFH*PTSRLTSSV 241
Score = 40.9 bits (83), Expect(2) = 8e-070
Identities = 17/32 (53%), Positives = 23/32 (71%)
Frame = -1 / -2
Query: 609 DKV*NGFTGNILVTLALTTLNRIADPTHNQKL 514
+K+*N F +++TLAL TL ADPT N+KL
Sbjct: 574 EKI*NSFLKTVVLTLALRTLEHRADPTWNKKL 479
Score = 24.4 bits (47), Expect(2) = 6e-084
Identities = 12/20 (60%), Positives = 15/20 (75%)
Frame = +2 / +3
Query: 515 SFWL*VGSAIRLSVVKARVT 574
SF VGSA+ SV+KARV+
Sbjct: 480 SFLFQVGSALCSSVLKARVS 539
Score = 23.1 bits (44), Expect(2) = 2e-061
Identities = 14/31 (45%), Positives = 19/31 (61%)
Frame = -2 / -3
Query: 605 KFEMGSQGTYW*LWL*QRSIELLIQLITKNS 513
++E+ S +*LWL*+ IQL TKNS
Sbjct: 570 RYEIVS*KQLY*LWL*EHWNIEQIQLGTKNS 478
>gb|BQ768014.1|BQ768014 EBro08_SQ010_O11_R root, 3 week, drought-stressed, cv Optic, EBro08
Hordeum vulgare subsp. vulgare cDNA clone
EBro08_SQ010_O11 5', mRNA sequence
Length = 554
Score = 307 bits (664), Expect(2) = 6e-084
Identities = 132/142 (92%), Positives = 136/142 (95%)
Frame = +3 / +2
Query: 60 AATATARMPFKRFVEIGRVALVNYGKDYGRLVVIVDVVDQNRALVDAPDMVRCQVNFKRL 239
AA A A+MPFKRFVEIGRVALVNYGKDYGRLVVIVDVVDQNRALVDAPDM+RCQ+NFKRL
Sbjct: 32 AAAAAAKMPFKRFVEIGRVALVNYGKDYGRLVVIVDVVDQNRALVDAPDMIRCQMNFKRL 211
Query: 240 SLTDIKIDIKRVPKKTTLIKAMEEADVKTKWENSSWGKKLIVQKRRASLNDFDRFKVMLA 419
SLTDIKIDIKR+PKK TLIKAMEEADVKTKWENSSWGKKLIVQKRRASLNDFDRFKVMLA
Sbjct: 212 SLTDIKIDIKRIPKKATLIKAMEEADVKTKWENSSWGKKLIVQKRRASLNDFDRFKVMLA 391
Query: 420 KIKRGGAIRQELAKLKKASTA* 485
KIKRGGAIRQELAKLKK A*
Sbjct: 392 KIKRGGAIRQELAKLKKEVAA* 457
Score = 243 bits (525), Expect(2) = 4e-067
Identities = 113/142 (79%), Positives = 117/142 (82%)
Frame = -3 / -3
Query: 484 *AVDAFLSLASSCLIAPPLLIFASMTLNLSKSLSDALLFWTISFLPHELFSHLVFTSASS 305
*A +FLSLASSCLIAPPLLI A+MTLNLSKS SDALLF TISFLP ELFSHLVFTSASS
Sbjct: 456 *AATSFLSLASSCLIAPPLLILANMTLNLSKSFSDALLF*TISFLPQELFSHLVFTSASS 277
Query: 304 IALIRVVFLGTRLMSILMSVSESRLKFTWHLTISGASTSALFWXXXXXXXXXRP*SFP*F 125
+ALI+V FLG RLMSILMSVSE RLKF WHL ISGASTSA FW RP*S P*F
Sbjct: 276 MALIKVAFLGIRLMSILMSVSERRLKFIWHLIISGASTSARFWSTTSTMTTRRP*SLP*F 97
Query: 124 TRATRPISTNLLNGILAVAVAA 59
TRATRPISTNLLNGI A A AA
Sbjct: 96 TRATRPISTNLLNGIFAAAAAA 31
Score = 233 bits (503), Expect = 1e-060
Identities = 97/146 (66%), Positives = 110/146 (75%)
Frame = -2 / -2
Query: 485 LSCGRLLKLGELLPDSTTPLNLRQHDFEPIKVIERCSPLLDNQXXXXXXXXXXXLHISFL 306
LS LL+LG+LLPDSTTPLNL QHD EP+KVI+RCS LL+N+ HISFL
Sbjct: 457 LSSNLLLELGKLLPDSTTPLNLSQHDLEPVKVIQRCSSLLNNKLLAPGAVLPFGFHISFL 278
Query: 305 HRLDQGCLLGDTFDVNLDVSK*EPLEVHLAPDHIRGIHKCPVLVDHIDDDDETAIVLPVV 126
H LDQ CL GDT DVNLDV +*+ LEVHLAPDHIR + +CPVLVD +DDDDE A+VL VV
Sbjct: 277 HGLDQSCLFGDTLDVNLDVGQ*KTLEVHLAPDHIRSVDECPVLVDDVDDDDEAAVVLAVV 98
Query: 125 HQGHAPDLHEPLERHPRGGGGGAVKR 48
HQGH PDL EPLERH GG GG +R
Sbjct: 97 HQGHPPDLDEPLERHLCGGCGGGEER 20
Score = 207 bits (446), Expect = 7e-053
Identities = 95/133 (71%), Positives = 104/133 (78%)
Frame = +2 / +1
Query: 74 REDAVQEVRGDRARGPGELREGLWPSRRHRRCGRPEQGTCGCP*YGQVPGELQAALTY*H 253
R+DAVQEVR DRA GPGELR+GL P RRHRR RPE GT *Y QVP ELQA+ T H
Sbjct: 46 RKDAVQEVRRDRAGGPGELRQGLRPPRRHRRRRRPEPGTRRRS*YDQVPDELQASFTDRH 225
Query: 254 QD*HQTCPQEDNPDQGDGGS*CEDQVGEQLMGQEADCPEEESIAQ*L**VQSHAGED*EG 433
QD*HQ PQ+ N DQG GGS*CE+Q+GEQL+GQEA C EE+SIA+*L* VQ H G D*EG
Sbjct: 226 QD*HQAYPQKGNFDQGHGGS*CENQMGEQLLGQEAYCSEEKSIAE*L*QVQGHVG*D*EG 405
Query: 434 WCYQARARQA*EG 472
WCYQARA QA EG
Sbjct: 406 WCYQARACQAQEG 444
Score = 95.9 bits (203), Expect(2) = 2e-029
Identities = 44/59 (74%), Positives = 48/59 (81%)
Frame = +1 / +3
Query: 310 KLM*RPSGRTAHGARS*LSRRGEHRSMTLIGSKSCWRRLRGVVLSGKSSPSLRRRPQLK 486
KLM*+P+GRTA GARS L RR EHR MTL GS+SCW RLRGVVLSGKS PS RRR L+
Sbjct: 282 KLM*KPNGRTAPGARSLLFRREEHR*MTLTGSRSCWLRLRGVVLSGKSLPSSRRRLLLR 458
Score = 52.8 bits (109), Expect(2) = 2e-029
Identities = 30/50 (60%), Positives = 31/50 (62%)
Frame = +1 / +3
Query: 124 *TTGRTMAVXXXXXMWSTRTGHLWMPLIWSGAR*TSSGSHLLTSRLTSNV 273
*TT RT A STRTGH LI SGAR*TSS H TSRLTS+V
Sbjct: 96 *TTARTTAASSSSSTSSTRTGHSSTLLI*SGAR*TSSVFH*PTSRLTSSV 245
Score = 31.8 bits (63), Expect(2) = 4e-067
Identities = 13/22 (59%), Positives = 17/22 (77%)
Frame = -1 / -1
Query: 579 ILVTLALTTLNRIADPTHNQKL 514
+++TLAL TL ADPT N+KL
Sbjct: 548 VVLTLALRTLEHRADPTWNKKL 483
Score = 24.4 bits (47), Expect(2) = 6e-084
Identities = 12/20 (60%), Positives = 15/20 (75%)
Frame = +2 / +1
Query: 515 SFWL*VGSAIRLSVVKARVT 574
SF VGSA+ SV+KARV+
Sbjct: 484 SFLFQVGSALCSSVLKARVS 543
>gb|BM377475.2|BM377475 EBem04_SQ003_D24_R embryo, 12 DPA, no treatment, cv Optic, EBem04
Hordeum vulgare subsp. vulgare cDNA clone
EBem04_SQ003_D24 5', mRNA sequence
Length = 549
Score = 307 bits (664), Expect(2) = 6e-084
Identities = 132/142 (92%), Positives = 136/142 (95%)
Frame = +3 / +2
Query: 60 AATATARMPFKRFVEIGRVALVNYGKDYGRLVVIVDVVDQNRALVDAPDMVRCQVNFKRL 239
AA A A+MPFKRFVEIGRVALVNYGKDYGRLVVIVDVVDQNRALVDAPDM+RCQ+NFKRL
Sbjct: 32 AAAAAAKMPFKRFVEIGRVALVNYGKDYGRLVVIVDVVDQNRALVDAPDMIRCQMNFKRL 211
Query: 240 SLTDIKIDIKRVPKKTTLIKAMEEADVKTKWENSSWGKKLIVQKRRASLNDFDRFKVMLA 419
SLTDIKIDIKR+PKK TLIKAMEEADVKTKWENSSWGKKLIVQKRRASLNDFDRFKVMLA
Sbjct: 212 SLTDIKIDIKRIPKKATLIKAMEEADVKTKWENSSWGKKLIVQKRRASLNDFDRFKVMLA 391
Query: 420 KIKRGGAIRQELAKLKKASTA* 485
KIKRGGAIRQELAKLKK A*
Sbjct: 392 KIKRGGAIRQELAKLKKEVAA* 457
Score = 243 bits (525), Expect(2) = 4e-067
Identities = 113/142 (79%), Positives = 117/142 (82%)
Frame = -3 / -1
Query: 484 *AVDAFLSLASSCLIAPPLLIFASMTLNLSKSLSDALLFWTISFLPHELFSHLVFTSASS 305
*A +FLSLASSCLIAPPLLI A+MTLNLSKS SDALLF TISFLP ELFSHLVFTSASS
Sbjct: 456 *AATSFLSLASSCLIAPPLLILANMTLNLSKSFSDALLF*TISFLPQELFSHLVFTSASS 277
Query: 304 IALIRVVFLGTRLMSILMSVSESRLKFTWHLTISGASTSALFWXXXXXXXXXRP*SFP*F 125
+ALI+V FLG RLMSILMSVSE RLKF WHL ISGASTSA FW RP*S P*F
Sbjct: 276 MALIKVAFLGIRLMSILMSVSERRLKFIWHLIISGASTSARFWSTTSTMTTRRP*SLP*F 97
Query: 124 TRATRPISTNLLNGILAVAVAA 59
TRATRPISTNLLNGI A A AA
Sbjct: 96 TRATRPISTNLLNGIFAAAAAA 31
Score = 233 bits (503), Expect = 1e-060
Identities = 97/146 (66%), Positives = 110/146 (75%)
Frame = -2 / -3
Query: 485 LSCGRLLKLGELLPDSTTPLNLRQHDFEPIKVIERCSPLLDNQXXXXXXXXXXXLHISFL 306
LS LL+LG+LLPDSTTPLNL QHD EP+KVI+RCS LL+N+ HISFL
Sbjct: 457 LSSNLLLELGKLLPDSTTPLNLSQHDLEPVKVIQRCSSLLNNKLLAPGAVLPFGFHISFL 278
Query: 305 HRLDQGCLLGDTFDVNLDVSK*EPLEVHLAPDHIRGIHKCPVLVDHIDDDDETAIVLPVV 126
H LDQ CL GDT DVNLDV +*+ LEVHLAPDHIR + +CPVLVD +DDDDE A+VL VV
Sbjct: 277 HGLDQSCLFGDTLDVNLDVGQ*KTLEVHLAPDHIRSVDECPVLVDDVDDDDEAAVVLAVV 98
Query: 125 HQGHAPDLHEPLERHPRGGGGGAVKR 48
HQGH PDL EPLERH GG GG +R
Sbjct: 97 HQGHPPDLDEPLERHLCGGCGGGEER 20
Score = 207 bits (446), Expect = 7e-053
Identities = 95/133 (71%), Positives = 104/133 (78%)
Frame = +2 / +1
Query: 74 REDAVQEVRGDRARGPGELREGLWPSRRHRRCGRPEQGTCGCP*YGQVPGELQAALTY*H 253
R+DAVQEVR DRA GPGELR+GL P RRHRR RPE GT *Y QVP ELQA+ T H
Sbjct: 46 RKDAVQEVRRDRAGGPGELRQGLRPPRRHRRRRRPEPGTRRRS*YDQVPDELQASFTDRH 225
Query: 254 QD*HQTCPQEDNPDQGDGGS*CEDQVGEQLMGQEADCPEEESIAQ*L**VQSHAGED*EG 433
QD*HQ PQ+ N DQG GGS*CE+Q+GEQL+GQEA C EE+SIA+*L* VQ H G D*EG
Sbjct: 226 QD*HQAYPQKGNFDQGHGGS*CENQMGEQLLGQEAYCSEEKSIAE*L*QVQGHVG*D*EG 405
Query: 434 WCYQARARQA*EG 472
WCYQARA QA EG
Sbjct: 406 WCYQARACQAQEG 444
Score = 95.9 bits (203), Expect(2) = 2e-029
Identities = 44/59 (74%), Positives = 48/59 (81%)
Frame = +1 / +3
Query: 310 KLM*RPSGRTAHGARS*LSRRGEHRSMTLIGSKSCWRRLRGVVLSGKSSPSLRRRPQLK 486
KLM*+P+GRTA GARS L RR EHR MTL GS+SCW RLRGVVLSGKS PS RRR L+
Sbjct: 282 KLM*KPNGRTAPGARSLLFRREEHR*MTLTGSRSCWLRLRGVVLSGKSLPSSRRRLLLR 458
Score = 52.8 bits (109), Expect(2) = 2e-029
Identities = 30/50 (60%), Positives = 31/50 (62%)
Frame = +1 / +3
Query: 124 *TTGRTMAVXXXXXMWSTRTGHLWMPLIWSGAR*TSSGSHLLTSRLTSNV 273
*TT RT A STRTGH LI SGAR*TSS H TSRLTS+V
Sbjct: 96 *TTARTTAASSSSSTSSTRTGHSSTLLI*SGAR*TSSVFH*PTSRLTSSV 245
Score = 31.8 bits (63), Expect(2) = 4e-067
Identities = 13/22 (59%), Positives = 17/22 (77%)
Frame = -1 / -2
Query: 579 ILVTLALTTLNRIADPTHNQKL 514
+++TLAL TL ADPT N+KL
Sbjct: 548 VVLTLALRTLEHRADPTWNKKL 483
Score = 24.4 bits (47), Expect(2) = 6e-084
Identities = 12/20 (60%), Positives = 15/20 (75%)
Frame = +2 / +1
Query: 515 SFWL*VGSAIRLSVVKARVT 574
SF VGSA+ SV+KARV+
Sbjct: 484 SFLFQVGSALCSSVLKARVS 543
>gb|BM370305.2|BM370305 EBro08_SQ003_M14_R root, 3 week, drought-stressed, cv Optic, EBro08
Hordeum vulgare subsp. vulgare cDNA clone
EBro08_SQ003_M14 5', mRNA sequence
Length = 679
Score = 306 bits (663), Expect(2) = 8e-084
Identities = 131/141 (92%), Positives = 135/141 (95%)
Frame = +3 / +1
Query: 60 AATATARMPFKRFVEIGRVALVNYGKDYGRLVVIVDVVDQNRALVDAPDMVRCQVNFKRL 239
AA A A+MPFKRFVEIGRVALVNYGKDYGRLVVIVDVVDQNRALVDAPDM+RCQ+NFKRL
Sbjct: 34 AAAAAAKMPFKRFVEIGRVALVNYGKDYGRLVVIVDVVDQNRALVDAPDMIRCQMNFKRL 213
Query: 240 SLTDIKIDIKRVPKKTTLIKAMEEADVKTKWENSSWGKKLIVQKRRASLNDFDRFKVMLA 419
SLTDIKIDIKR+PKK TLIKAMEEADVKTKWENSSWGKKLIVQKRRASLNDFDRFKVMLA
Sbjct: 214 SLTDIKIDIKRIPKKATLIKAMEEADVKTKWENSSWGKKLIVQKRRASLNDFDRFKVMLA 393
Query: 420 KIKRGGAIRQELAKLKKASTA 482
KIKRGGAIRQELAKLKK A
Sbjct: 394 KIKRGGAIRQELAKLKKEVAA 456
Score = 243 bits (525), Expect(2) = 8e-070
Identities = 113/142 (79%), Positives = 117/142 (82%)
Frame = -3 / -3
Query: 484 *AVDAFLSLASSCLIAPPLLIFASMTLNLSKSLSDALLFWTISFLPHELFSHLVFTSASS 305
*A +FLSLASSCLIAPPLLI A+MTLNLSKS SDALLF TISFLP ELFSHLVFTSASS
Sbjct: 458 *AATSFLSLASSCLIAPPLLILANMTLNLSKSFSDALLF*TISFLPQELFSHLVFTSASS 279
Query: 304 IALIRVVFLGTRLMSILMSVSESRLKFTWHLTISGASTSALFWXXXXXXXXXRP*SFP*F 125
+ALI+V FLG RLMSILMSVSE RLKF WHL ISGASTSA FW RP*S P*F
Sbjct: 278 MALIKVAFLGIRLMSILMSVSERRLKFIWHLIISGASTSARFWSTTSTMTTRRP*SLP*F 99
Query: 124 TRATRPISTNLLNGILAVAVAA 59
TRATRPISTNLLNGI A A AA
Sbjct: 98 TRATRPISTNLLNGIFAAAAAA 33
Score = 231 bits (499), Expect(2) = 6e-061
Identities = 96/145 (66%), Positives = 109/145 (75%)
Frame = -2 / -2
Query: 482 SCGRLLKLGELLPDSTTPLNLRQHDFEPIKVIERCSPLLDNQXXXXXXXXXXXLHISFLH 303
S LL+LG+LLPDSTTPLNL QHD EP+KVI+RCS LL+N+ HISFLH
Sbjct: 456 SSNLLLELGKLLPDSTTPLNLSQHDLEPVKVIQRCSSLLNNKLLAPGAVLPFGFHISFLH 277
Query: 302 RLDQGCLLGDTFDVNLDVSK*EPLEVHLAPDHIRGIHKCPVLVDHIDDDDETAIVLPVVH 123
LDQ CL GDT DVNLDV +*+ LEVHLAPDHIR + +CPVLVD +DDDDE A+VL VVH
Sbjct: 276 GLDQSCLFGDTLDVNLDVGQ*KTLEVHLAPDHIRSVDECPVLVDDVDDDDEAAVVLAVVH 97
Query: 122 QGHAPDLHEPLERHPRGGGGGAVKR 48
QGH PDL EPLERH GG GG +R
Sbjct: 96 QGHPPDLDEPLERHLCGGCGGGEER 22
Score = 207 bits (446), Expect = 7e-053
Identities = 95/133 (71%), Positives = 104/133 (78%)
Frame = +2 / +3
Query: 74 REDAVQEVRGDRARGPGELREGLWPSRRHRRCGRPEQGTCGCP*YGQVPGELQAALTY*H 253
R+DAVQEVR DRA GPGELR+GL P RRHRR RPE GT *Y QVP ELQA+ T H
Sbjct: 48 RKDAVQEVRRDRAGGPGELRQGLRPPRRHRRRRRPEPGTRRRS*YDQVPDELQASFTDRH 227
Query: 254 QD*HQTCPQEDNPDQGDGGS*CEDQVGEQLMGQEADCPEEESIAQ*L**VQSHAGED*EG 433
QD*HQ PQ+ N DQG GGS*CE+Q+GEQL+GQEA C EE+SIA+*L* VQ H G D*EG
Sbjct: 228 QD*HQAYPQKGNFDQGHGGS*CENQMGEQLLGQEAYCSEEKSIAE*L*QVQGHVG*D*EG 407
Query: 434 WCYQARARQA*EG 472
WCYQARA QA EG
Sbjct: 408 WCYQARACQAQEG 446
Score = 95.5 bits (202), Expect(2) = 3e-029
Identities = 43/55 (78%), Positives = 46/55 (83%)
Frame = +1 / +2
Query: 310 KLM*RPSGRTAHGARS*LSRRGEHRSMTLIGSKSCWRRLRGVVLSGKSSPSLRRR 474
KLM*+P+GRTA GARS L RR EHR MTL GS+SCW RLRGVVLSGKS PS RRR
Sbjct: 284 KLM*KPNGRTAPGARSLLFRREEHR*MTLTGSRSCWLRLRGVVLSGKSLPSSRRR 448
Score = 52.8 bits (109), Expect(2) = 3e-029
Identities = 30/50 (60%), Positives = 31/50 (62%)
Frame = +1 / +2
Query: 124 *TTGRTMAVXXXXXMWSTRTGHLWMPLIWSGAR*TSSGSHLLTSRLTSNV 273
*TT RT A STRTGH LI SGAR*TSS H TSRLTS+V
Sbjct: 98 *TTARTTAASSSSSTSSTRTGHSSTLLI*SGAR*TSSVFH*PTSRLTSSV 247
Score = 40.9 bits (83), Expect(2) = 8e-070
Identities = 17/32 (53%), Positives = 23/32 (71%)
Frame = -1 / -1
Query: 609 DKV*NGFTGNILVTLALTTLNRIADPTHNQKL 514
+K+*N F +++TLAL TL ADPT N+KL
Sbjct: 580 EKI*NSFLKTVVLTLALRTLEHRADPTWNKKL 485
Score = 24.4 bits (47), Expect(2) = 8e-084
Identities = 12/20 (60%), Positives = 15/20 (75%)
Frame = +2 / +3
Query: 515 SFWL*VGSAIRLSVVKARVT 574
SF VGSA+ SV+KARV+
Sbjct: 486 SFLFQVGSALCSSVLKARVS 545
Score = 23.1 bits (44), Expect(2) = 6e-061
Identities = 14/31 (45%), Positives = 19/31 (61%)
Frame = -2 / -2
Query: 605 KFEMGSQGTYW*LWL*QRSIELLIQLITKNS 513
++E+ S +*LWL*+ IQL TKNS
Sbjct: 576 RYEIVS*KQLY*LWL*EHWNIEQIQLGTKNS 484
>gb|BM377699.2|BM377699 EBem04_SQ003_O16_R embryo, 12 DPA, no treatment, cv Optic, EBem04
Hordeum vulgare subsp. vulgare cDNA clone
EBem04_SQ003_O16 5', mRNA sequence
Length = 602
Score = 306 bits (663), Expect(2) = 8e-084
Identities = 131/141 (92%), Positives = 135/141 (95%)
Frame = +3 / +1
Query: 60 AATATARMPFKRFVEIGRVALVNYGKDYGRLVVIVDVVDQNRALVDAPDMVRCQVNFKRL 239
AA A A+MPFKRFVEIGRVALVNYGKDYGRLVVIVDVVDQNRALVDAPDM+RCQ+NFKRL
Sbjct: 22 AAAAAAKMPFKRFVEIGRVALVNYGKDYGRLVVIVDVVDQNRALVDAPDMIRCQMNFKRL 201
Query: 240 SLTDIKIDIKRVPKKTTLIKAMEEADVKTKWENSSWGKKLIVQKRRASLNDFDRFKVMLA 419
SLTDIKIDIKR+PKK TLIKAMEEADVKTKWENSSWGKKLIVQKRRASLNDFDRFKVMLA
Sbjct: 202 SLTDIKIDIKRIPKKATLIKAMEEADVKTKWENSSWGKKLIVQKRRASLNDFDRFKVMLA 381
Query: 420 KIKRGGAIRQELAKLKKASTA 482
KIKRGGAIRQELAKLKK A
Sbjct: 382 KIKRGGAIRQELAKLKKEVAA 444
Score = 243 bits (525), Expect(2) = 8e-070
Identities = 113/142 (79%), Positives = 117/142 (82%)
Frame = -3 / -1
Query: 484 *AVDAFLSLASSCLIAPPLLIFASMTLNLSKSLSDALLFWTISFLPHELFSHLVFTSASS 305
*A +FLSLASSCLIAPPLLI A+MTLNLSKS SDALLF TISFLP ELFSHLVFTSASS
Sbjct: 446 *AATSFLSLASSCLIAPPLLILANMTLNLSKSFSDALLF*TISFLPQELFSHLVFTSASS 267
Query: 304 IALIRVVFLGTRLMSILMSVSESRLKFTWHLTISGASTSALFWXXXXXXXXXRP*SFP*F 125
+ALI+V FLG RLMSILMSVSE RLKF WHL ISGASTSA FW RP*S P*F
Sbjct: 266 MALIKVAFLGIRLMSILMSVSERRLKFIWHLIISGASTSARFWSTTSTMTTRRP*SLP*F 87
Query: 124 TRATRPISTNLLNGILAVAVAA 59
TRATRPISTNLLNGI A A AA
Sbjct: 86 TRATRPISTNLLNGIFAAAAAA 21
Score = 231 bits (499), Expect(2) = 6e-061
Identities = 96/145 (66%), Positives = 109/145 (75%)
Frame = -2 / -3
Query: 482 SCGRLLKLGELLPDSTTPLNLRQHDFEPIKVIERCSPLLDNQXXXXXXXXXXXLHISFLH 303
S LL+LG+LLPDSTTPLNL QHD EP+KVI+RCS LL+N+ HISFLH
Sbjct: 444 SSNLLLELGKLLPDSTTPLNLSQHDLEPVKVIQRCSSLLNNKLLAPGAVLPFGFHISFLH 265
Query: 302 RLDQGCLLGDTFDVNLDVSK*EPLEVHLAPDHIRGIHKCPVLVDHIDDDDETAIVLPVVH 123
LDQ CL GDT DVNLDV +*+ LEVHLAPDHIR + +CPVLVD +DDDDE A+VL VVH
Sbjct: 264 GLDQSCLFGDTLDVNLDVGQ*KTLEVHLAPDHIRSVDECPVLVDDVDDDDEAAVVLAVVH 85
Query: 122 QGHAPDLHEPLERHPRGGGGGAVKR 48
QGH PDL EPLERH GG GG +R
Sbjct: 84 QGHPPDLDEPLERHLCGGCGGGEER 10
Score = 207 bits (446), Expect = 7e-053
Identities = 95/133 (71%), Positives = 104/133 (78%)
Frame = +2 / +3
Query: 74 REDAVQEVRGDRARGPGELREGLWPSRRHRRCGRPEQGTCGCP*YGQVPGELQAALTY*H 253
R+DAVQEVR DRA GPGELR+GL P RRHRR RPE GT *Y QVP ELQA+ T H
Sbjct: 36 RKDAVQEVRRDRAGGPGELRQGLRPPRRHRRRRRPEPGTRRRS*YDQVPDELQASFTDRH 215
Query: 254 QD*HQTCPQEDNPDQGDGGS*CEDQVGEQLMGQEADCPEEESIAQ*L**VQSHAGED*EG 433
QD*HQ PQ+ N DQG GGS*CE+Q+GEQL+GQEA C EE+SIA+*L* VQ H G D*EG
Sbjct: 216 QD*HQAYPQKGNFDQGHGGS*CENQMGEQLLGQEAYCSEEKSIAE*L*QVQGHVG*D*EG 395
Query: 434 WCYQARARQA*EG 472
WCYQARA QA EG
Sbjct: 396 WCYQARACQAQEG 434
Score = 95.5 bits (202), Expect(2) = 3e-029
Identities = 43/55 (78%), Positives = 46/55 (83%)
Frame = +1 / +2
Query: 310 KLM*RPSGRTAHGARS*LSRRGEHRSMTLIGSKSCWRRLRGVVLSGKSSPSLRRR 474
KLM*+P+GRTA GARS L RR EHR MTL GS+SCW RLRGVVLSGKS PS RRR
Sbjct: 272 KLM*KPNGRTAPGARSLLFRREEHR*MTLTGSRSCWLRLRGVVLSGKSLPSSRRR 436
Score = 52.8 bits (109), Expect(2) = 3e-029
Identities = 30/50 (60%), Positives = 31/50 (62%)
Frame = +1 / +2
Query: 124 *TTGRTMAVXXXXXMWSTRTGHLWMPLIWSGAR*TSSGSHLLTSRLTSNV 273
*TT RT A STRTGH LI SGAR*TSS H TSRLTS+V
Sbjct: 86 *TTARTTAASSSSSTSSTRTGHSSTLLI*SGAR*TSSVFH*PTSRLTSSV 235
Score = 40.9 bits (83), Expect(2) = 8e-070
Identities = 17/32 (53%), Positives = 23/32 (71%)
Frame = -1 / -2
Query: 609 DKV*NGFTGNILVTLALTTLNRIADPTHNQKL 514
+K+*N F +++TLAL TL ADPT N+KL
Sbjct: 568 EKI*NSFLKTVVLTLALRTLEHRADPTWNKKL 473
Score = 24.4 bits (47), Expect(2) = 8e-084
Identities = 12/20 (60%), Positives = 15/20 (75%)
Frame = +2 / +3
Query: 515 SFWL*VGSAIRLSVVKARVT 574
SF VGSA+ SV+KARV+
Sbjct: 474 SFLFQVGSALCSSVLKARVS 533
Score = 23.1 bits (44), Expect(2) = 6e-061
Identities = 14/31 (45%), Positives = 19/31 (61%)
Frame = -2 / -3
Query: 605 KFEMGSQGTYW*LWL*QRSIELLIQLITKNS 513
++E+ S +*LWL*+ IQL TKNS
Sbjct: 564 RYEIVS*KQLY*LWL*EHWNIEQIQLGTKNS 472
>gb|BE421867.1|BE421867 HWM015cF.10r ITEC HWM Barley Leaf Library Hordeum vulgare subsp.
vulgare cDNA clone HWM015cF.10, mRNA sequence
Length = 816
Score = 305 bits (660), Expect(2) = 2e-083
Identities = 131/142 (92%), Positives = 135/142 (95%)
Frame = +3 / +2
Query: 60 AATATARMPFKRFVEIGRVALVNYGKDYGRLVVIVDVVDQNRALVDAPDMVRCQVNFKRL 239
A A A+MPFKRFVEIGRVALVNYGKDYGRLVVIVDVVDQNRALVDAPDM+RCQ+NFKRL
Sbjct: 143 AVAAAAKMPFKRFVEIGRVALVNYGKDYGRLVVIVDVVDQNRALVDAPDMIRCQMNFKRL 322
Query: 240 SLTDIKIDIKRVPKKTTLIKAMEEADVKTKWENSSWGKKLIVQKRRASLNDFDRFKVMLA 419
SLTDIKIDIKR+PKK TLIKAMEEADVKTKWENSSWGKKLIVQKRRASLNDFDRFKVMLA
Sbjct: 323 SLTDIKIDIKRIPKKATLIKAMEEADVKTKWENSSWGKKLIVQKRRASLNDFDRFKVMLA 502
Query: 420 KIKRGGAIRQELAKLKKASTA* 485
KIKRGGAIRQELAKLKK A*
Sbjct: 503 KIKRGGAIRQELAKLKKEVAA* 568
Score = 241 bits (521), Expect(2) = 3e-069
Identities = 112/142 (78%), Positives = 116/142 (81%)
Frame = -3 / -1
Query: 484 *AVDAFLSLASSCLIAPPLLIFASMTLNLSKSLSDALLFWTISFLPHELFSHLVFTSASS 305
*A +FLSLASSCLIAPPLLI A+MTLNLSKS SDALLF TISFLP ELFSHLVFTSASS
Sbjct: 567 *AATSFLSLASSCLIAPPLLILANMTLNLSKSFSDALLF*TISFLPQELFSHLVFTSASS 388
Query: 304 IALIRVVFLGTRLMSILMSVSESRLKFTWHLTISGASTSALFWXXXXXXXXXRP*SFP*F 125
+ALI+V FLG RLMSILMSVSE RLKF WHL ISGASTSA FW RP*S P*F
Sbjct: 387 MALIKVAFLGIRLMSILMSVSERRLKFIWHLIISGASTSARFWSTTSTMTTRRP*SLP*F 208
Query: 124 TRATRPISTNLLNGILAVAVAA 59
TRATRPISTNLLNGI A A A
Sbjct: 207 TRATRPISTNLLNGIFAAAATA 142
Score = 226 bits (488), Expect(2) = 2e-059
Identities = 95/146 (65%), Positives = 108/146 (73%)
Frame = -2 / -3
Query: 485 LSCGRLLKLGELLPDSTTPLNLRQHDFEPIKVIERCSPLLDNQXXXXXXXXXXXLHISFL 306
LS LL+LG+LL DSTTPLNL QHD EP+KVI+RCS LL+N+ HISFL
Sbjct: 568 LSSNLLLELGKLLSDSTTPLNLSQHDLEPVKVIQRCSSLLNNKLLAPGAVLPFGFHISFL 389
Query: 305 HRLDQGCLLGDTFDVNLDVSK*EPLEVHLAPDHIRGIHKCPVLVDHIDDDDETAIVLPVV 126
H LDQ CL GDT DVNLDV +*+ LEVHLAPDHIR + +CPVLVD +DDDDE A+VL VV
Sbjct: 388 HGLDQSCLFGDTLDVNLDVGQ*KTLEVHLAPDHIRSVDECPVLVDDVDDDDEAAVVLAVV 209
Query: 125 HQGHAPDLHEPLERHPRGGGGGAVKR 48
HQGH PDL EPLERH GG G +R
Sbjct: 208 HQGHPPDLDEPLERHLCGGCDGGEER 131
Score = 205 bits (442), Expect = 3e-052
Identities = 94/133 (70%), Positives = 103/133 (77%)
Frame = +2 / +1
Query: 74 REDAVQEVRGDRARGPGELREGLWPSRRHRRCGRPEQGTCGCP*YGQVPGELQAALTY*H 253
R+DAVQEVR DRA GPGELR+GL P RRHRR RPE GT *Y QVP ELQA+ T H
Sbjct: 157 RKDAVQEVRRDRAGGPGELRQGLRPPRRHRRRRRPEPGTRRRS*YDQVPDELQASFTDRH 336
Query: 254 QD*HQTCPQEDNPDQGDGGS*CEDQVGEQLMGQEADCPEEESIAQ*L**VQSHAGED*EG 433
QD*HQ PQ+ N DQG GGS*CE+Q+GEQL+GQEA C EE+SIA+*L* VQ H G D*EG
Sbjct: 337 QD*HQAYPQKGNFDQGHGGS*CENQMGEQLLGQEAYCSEEKSIAE*L*QVQGHVG*D*EG 516
Query: 434 WCYQARARQA*EG 472
WCYQ RA QA EG
Sbjct: 517 WCYQTRACQAQEG 555
Score = 92.7 bits (196), Expect(2) = 2e-028
Identities = 43/59 (72%), Positives = 47/59 (79%)
Frame = +1 / +3
Query: 310 KLM*RPSGRTAHGARS*LSRRGEHRSMTLIGSKSCWRRLRGVVLSGKSSPSLRRRPQLK 486
KLM*+P+GRTA GARS L RR EHR MTL GS+SCW RLRGVVLS KS PS RRR L+
Sbjct: 393 KLM*KPNGRTAPGARSLLFRREEHR*MTLTGSRSCWLRLRGVVLSDKSLPSSRRRLLLR 569
Score = 52.8 bits (109), Expect(2) = 2e-028
Identities = 30/50 (60%), Positives = 31/50 (62%)
Frame = +1 / +3
Query: 124 *TTGRTMAVXXXXXMWSTRTGHLWMPLIWSGAR*TSSGSHLLTSRLTSNV 273
*TT RT A STRTGH LI SGAR*TSS H TSRLTS+V
Sbjct: 207 *TTARTTAASSSSSTSSTRTGHSSTLLI*SGAR*TSSVFH*PTSRLTSSV 356
Score = 40.9 bits (83), Expect(2) = 3e-069
Identities = 17/32 (53%), Positives = 23/32 (71%)
Frame = -1 / -2
Query: 609 DKV*NGFTGNILVTLALTTLNRIADPTHNQKL 514
+K+*N F +++TLAL TL ADPT N+KL
Sbjct: 689 EKI*NSFLKTVVLTLALRTLEHRADPTWNKKL 594
Score = 24.4 bits (47), Expect(2) = 2e-083
Identities = 12/20 (60%), Positives = 15/20 (75%)
Frame = +2 / +1
Query: 515 SFWL*VGSAIRLSVVKARVT 574
SF VGSA+ SV+KARV+
Sbjct: 595 SFLFQVGSALCSSVLKARVS 654
Score = 23.1 bits (44), Expect(2) = 2e-059
Identities = 14/31 (45%), Positives = 19/31 (61%)
Frame = -2 / -3
Query: 605 KFEMGSQGTYW*LWL*QRSIELLIQLITKNS 513
++E+ S +*LWL*+ IQL TKNS
Sbjct: 685 RYEIVS*KQLY*LWL*EHWNIEQIQLGTKNS 593
>gb|BM371259.2|BM371259 EBma08_SQ002_A19_R maternal, 28 DPA, no treatment, cv Optic, EBma08
Hordeum vulgare subsp. vulgare cDNA clone
EBma08_SQ002_A19 5', mRNA sequence
Length = 607
Score = 305 bits (660), Expect(2) = 2e-083
Identities = 130/141 (92%), Positives = 135/141 (95%)
Frame = +3 / +2
Query: 60 AATATARMPFKRFVEIGRVALVNYGKDYGRLVVIVDVVDQNRALVDAPDMVRCQVNFKRL 239
AA A A+MPFKRFVEIGRVALVNYGKDYGRLVVIVDVVDQNRALVDAPDM+RCQ+NFKRL
Sbjct: 29 AAAAAAKMPFKRFVEIGRVALVNYGKDYGRLVVIVDVVDQNRALVDAPDMIRCQMNFKRL 208
Query: 240 SLTDIKIDIKRVPKKTTLIKAMEEADVKTKWENSSWGKKLIVQKRRASLNDFDRFKVMLA 419
SLTDIKIDIKR+PKK TLIKAMEEADVKTKWENSSWGKKLIVQKRRASLNDFDRFKVMLA
Sbjct: 209 SLTDIKIDIKRIPKKATLIKAMEEADVKTKWENSSWGKKLIVQKRRASLNDFDRFKVMLA 388
Query: 420 KIKRGGAIRQELAKLKKASTA 482
KIKRGGAI+QELAKLKK A
Sbjct: 389 KIKRGGAIKQELAKLKKEVAA 451
Score = 243 bits (525), Expect(2) = 8e-070
Identities = 113/142 (79%), Positives = 117/142 (82%)
Frame = -3 / -2
Query: 484 *AVDAFLSLASSCLIAPPLLIFASMTLNLSKSLSDALLFWTISFLPHELFSHLVFTSASS 305
*A +FLSLASSCLIAPPLLI A+MTLNLSKS SDALLF TISFLP ELFSHLVFTSASS
Sbjct: 453 *AATSFLSLASSCLIAPPLLILANMTLNLSKSFSDALLF*TISFLPQELFSHLVFTSASS 274
Query: 304 IALIRVVFLGTRLMSILMSVSESRLKFTWHLTISGASTSALFWXXXXXXXXXRP*SFP*F 125
+ALI+V FLG RLMSILMSVSE RLKF WHL ISGASTSA FW RP*S P*F
Sbjct: 273 MALIKVAFLGIRLMSILMSVSERRLKFIWHLIISGASTSARFWSTTSTMTTRRP*SLP*F 94
Query: 124 TRATRPISTNLLNGILAVAVAA 59
TRATRPISTNLLNGI A A AA
Sbjct: 93 TRATRPISTNLLNGIFAAAAAA 28
Score = 226 bits (489), Expect(2) = 2e-059
Identities = 95/145 (65%), Positives = 108/145 (74%)
Frame = -2 / -1
Query: 482 SCGRLLKLGELLPDSTTPLNLRQHDFEPIKVIERCSPLLDNQXXXXXXXXXXXLHISFLH 303
S LL+LG+LL DSTTPLNL QHD EP+KVI+RCS LL+N+ HISFLH
Sbjct: 451 SSNLLLELGKLLLDSTTPLNLSQHDLEPVKVIQRCSSLLNNKLLAPGAVLPFGFHISFLH 272
Query: 302 RLDQGCLLGDTFDVNLDVSK*EPLEVHLAPDHIRGIHKCPVLVDHIDDDDETAIVLPVVH 123
LDQ CL GDT DVNLDV +*+ LEVHLAPDHIR + +CPVLVD +DDDDE A+VL VVH
Sbjct: 271 GLDQSCLFGDTLDVNLDVGQ*KTLEVHLAPDHIRSVDECPVLVDDVDDDDEAAVVLAVVH 92
Query: 122 QGHAPDLHEPLERHPRGGGGGAVKR 48
QGH PDL EPLERH GG GG +R
Sbjct: 91 QGHPPDLDEPLERHLCGGCGGGEER 17
Score = 207 bits (446), Expect = 7e-053
Identities = 95/133 (71%), Positives = 104/133 (78%)
Frame = +2 / +1
Query: 74 REDAVQEVRGDRARGPGELREGLWPSRRHRRCGRPEQGTCGCP*YGQVPGELQAALTY*H 253
R+DAVQEVR DRA GPGELR+GL P RRHRR RPE GT *Y QVP ELQA+ T H
Sbjct: 43 RKDAVQEVRRDRAGGPGELRQGLRPPRRHRRRRRPEPGTRRRS*YDQVPDELQASFTDRH 222
Query: 254 QD*HQTCPQEDNPDQGDGGS*CEDQVGEQLMGQEADCPEEESIAQ*L**VQSHAGED*EG 433
QD*HQ PQ+ N DQG GGS*CE+Q+GEQL+GQEA C EE+SIA+*L* VQ H G D*EG
Sbjct: 223 QD*HQAYPQKGNFDQGHGGS*CENQMGEQLLGQEAYCSEEKSIAE*L*QVQGHVG*D*EG 402
Query: 434 WCYQARARQA*EG 472
WCYQARA QA EG
Sbjct: 403 WCYQARACQAQEG 441
Score = 92.7 bits (196), Expect(2) = 2e-028
Identities = 42/55 (76%), Positives = 45/55 (81%)
Frame = +1 / +3
Query: 310 KLM*RPSGRTAHGARS*LSRRGEHRSMTLIGSKSCWRRLRGVVLSGKSSPSLRRR 474
KLM*+P+GRTA GARS L RR EHR MTL GS+SCW RLRGVVLS KS PS RRR
Sbjct: 279 KLM*KPNGRTAPGARSLLFRREEHR*MTLTGSRSCWLRLRGVVLSSKSLPSSRRR 443
Score = 52.8 bits (109), Expect(2) = 2e-028
Identities = 30/50 (60%), Positives = 31/50 (62%)
Frame = +1 / +3
Query: 124 *TTGRTMAVXXXXXMWSTRTGHLWMPLIWSGAR*TSSGSHLLTSRLTSNV 273
*TT RT A STRTGH LI SGAR*TSS H TSRLTS+V
Sbjct: 93 *TTARTTAASSSSSTSSTRTGHSSTLLI*SGAR*TSSVFH*PTSRLTSSV 242
Score = 40.9 bits (83), Expect(2) = 8e-070
Identities = 17/32 (53%), Positives = 23/32 (71%)
Frame = -1 / -3
Query: 609 DKV*NGFTGNILVTLALTTLNRIADPTHNQKL 514
+K+*N F +++TLAL TL ADPT N+KL
Sbjct: 575 EKI*NSFLKTVVLTLALRTLEHRADPTWNKKL 480
Score = 24.4 bits (47), Expect(2) = 2e-083
Identities = 12/20 (60%), Positives = 15/20 (75%)
Frame = +2 / +1
Query: 515 SFWL*VGSAIRLSVVKARVT 574
SF VGSA+ SV+KARV+
Sbjct: 481 SFLFQVGSALCSSVLKARVS 540
Score = 23.1 bits (44), Expect(2) = 2e-059
Identities = 14/31 (45%), Positives = 19/31 (61%)
Frame = -2 / -1
Query: 605 KFEMGSQGTYW*LWL*QRSIELLIQLITKNS 513
++E+ S +*LWL*+ IQL TKNS
Sbjct: 571 RYEIVS*KQLY*LWL*EHWNIEQIQLGTKNS 479
>gb|BU982565.1|BU982565 HA26O23r HA Hordeum vulgare subsp. vulgare cDNA clone HA26O23
5-PRIME, mRNA sequence
Length = 609
Score = 305 bits (660), Expect(2) = 2e-083
Identities = 131/142 (92%), Positives = 135/142 (95%)
Frame = +3 / +2
Query: 60 AATATARMPFKRFVEIGRVALVNYGKDYGRLVVIVDVVDQNRALVDAPDMVRCQVNFKRL 239
A A A+MPFKRFVEIGRVALVNYGKDYGRLVVIVDVVDQNRALVDAPDM+RCQ+NFKRL
Sbjct: 38 AVAAAAKMPFKRFVEIGRVALVNYGKDYGRLVVIVDVVDQNRALVDAPDMIRCQMNFKRL 217
Query: 240 SLTDIKIDIKRVPKKTTLIKAMEEADVKTKWENSSWGKKLIVQKRRASLNDFDRFKVMLA 419
SLTDIKIDIKR+PKK TLIKAMEEADVKTKWENSSWGKKLIVQKRRASLNDFDRFKVMLA
Sbjct: 218 SLTDIKIDIKRIPKKATLIKAMEEADVKTKWENSSWGKKLIVQKRRASLNDFDRFKVMLA 397
Query: 420 KIKRGGAIRQELAKLKKASTA* 485
KIKRGGAIRQELAKLKK A*
Sbjct: 398 KIKRGGAIRQELAKLKKEVAA* 463
Score = 241 bits (521), Expect(2) = 3e-069
Identities = 112/142 (78%), Positives = 116/142 (81%)
Frame = -3 / -1
Query: 484 *AVDAFLSLASSCLIAPPLLIFASMTLNLSKSLSDALLFWTISFLPHELFSHLVFTSASS 305
*A +FLSLASSCLIAPPLLI A+MTLNLSKS SDALLF TISFLP ELFSHLVFTSASS
Sbjct: 462 *AATSFLSLASSCLIAPPLLILANMTLNLSKSFSDALLF*TISFLPQELFSHLVFTSASS 283
Query: 304 IALIRVVFLGTRLMSILMSVSESRLKFTWHLTISGASTSALFWXXXXXXXXXRP*SFP*F 125
+ALI+V FLG RLMSILMSVSE RLKF WHL ISGASTSA FW RP*S P*F
Sbjct: 282 MALIKVAFLGIRLMSILMSVSERRLKFIWHLIISGASTSARFWSTTSTMTTRRP*SLP*F 103
Query: 124 TRATRPISTNLLNGILAVAVAA 59
TRATRPISTNLLNGI A A A
Sbjct: 102 TRATRPISTNLLNGIFAAAATA 37
Score = 226 bits (488), Expect(2) = 2e-059
Identities = 95/146 (65%), Positives = 108/146 (73%)
Frame = -2 / -3
Query: 485 LSCGRLLKLGELLPDSTTPLNLRQHDFEPIKVIERCSPLLDNQXXXXXXXXXXXLHISFL 306
LS LL+LG+LL DSTTPLNL QHD EP+KVI+RCS LL+N+ HISFL
Sbjct: 463 LSSNLLLELGKLLSDSTTPLNLSQHDLEPVKVIQRCSSLLNNKLLAPGAVLPFGFHISFL 284
Query: 305 HRLDQGCLLGDTFDVNLDVSK*EPLEVHLAPDHIRGIHKCPVLVDHIDDDDETAIVLPVV 126
H LDQ CL GDT DVNLDV +*+ LEVHLAPDHIR + +CPVLVD +DDDDE A+VL VV
Sbjct: 283 HGLDQSCLFGDTLDVNLDVGQ*KTLEVHLAPDHIRSVDECPVLVDDVDDDDEAAVVLAVV 104
Query: 125 HQGHAPDLHEPLERHPRGGGGGAVKR 48
HQGH PDL EPLERH GG G +R
Sbjct: 103 HQGHPPDLDEPLERHLCGGCDGGEER 26
Score = 205 bits (442), Expect = 3e-052
Identities = 94/133 (70%), Positives = 103/133 (77%)
Frame = +2 / +1
Query: 74 REDAVQEVRGDRARGPGELREGLWPSRRHRRCGRPEQGTCGCP*YGQVPGELQAALTY*H 253
R+DAVQEVR DRA GPGELR+GL P RRHRR RPE GT *Y QVP ELQA+ T H
Sbjct: 52 RKDAVQEVRRDRAGGPGELRQGLRPPRRHRRRRRPEPGTRRRS*YDQVPDELQASFTDRH 231
Query: 254 QD*HQTCPQEDNPDQGDGGS*CEDQVGEQLMGQEADCPEEESIAQ*L**VQSHAGED*EG 433
QD*HQ PQ+ N DQG GGS*CE+Q+GEQL+GQEA C EE+SIA+*L* VQ H G D*EG
Sbjct: 232 QD*HQAYPQKGNFDQGHGGS*CENQMGEQLLGQEAYCSEEKSIAE*L*QVQGHVG*D*EG 411
Query: 434 WCYQARARQA*EG 472
WCYQ RA QA EG
Sbjct: 412 WCYQTRACQAQEG 450
Score = 92.7 bits (196), Expect(2) = 2e-028
Identities = 43/59 (72%), Positives = 47/59 (79%)
Frame = +1 / +3
Query: 310 KLM*RPSGRTAHGARS*LSRRGEHRSMTLIGSKSCWRRLRGVVLSGKSSPSLRRRPQLK 486
KLM*+P+GRTA GARS L RR EHR MTL GS+SCW RLRGVVLS KS PS RRR L+
Sbjct: 288 KLM*KPNGRTAPGARSLLFRREEHR*MTLTGSRSCWLRLRGVVLSDKSLPSSRRRLLLR 464
Score = 52.8 bits (109), Expect(2) = 2e-028
Identities = 30/50 (60%), Positives = 31/50 (62%)
Frame = +1 / +3
Query: 124 *TTGRTMAVXXXXXMWSTRTGHLWMPLIWSGAR*TSSGSHLLTSRLTSNV 273
*TT RT A STRTGH LI SGAR*TSS H TSRLTS+V
Sbjct: 102 *TTARTTAASSSSSTSSTRTGHSSTLLI*SGAR*TSSVFH*PTSRLTSSV 251
Score = 40.9 bits (83), Expect(2) = 3e-069
Identities = 17/32 (53%), Positives = 23/32 (71%)
Frame = -1 / -2
Query: 609 DKV*NGFTGNILVTLALTTLNRIADPTHNQKL 514
+K+*N F +++TLAL TL ADPT N+KL
Sbjct: 584 EKI*NSFLKTVVLTLALRTLEHRADPTWNKKL 489
Score = 24.4 bits (47), Expect(2) = 2e-083
Identities = 12/20 (60%), Positives = 15/20 (75%)
Frame = +2 / +1
Query: 515 SFWL*VGSAIRLSVVKARVT 574
SF VGSA+ SV+KARV+
Sbjct: 490 SFLFQVGSALCSSVLKARVS 549
Score = 23.1 bits (44), Expect(2) = 2e-059
Identities = 14/31 (45%), Positives = 19/31 (61%)
Frame = -2 / -3
Query: 605 KFEMGSQGTYW*LWL*QRSIELLIQLITKNS 513
++E+ S +*LWL*+ IQL TKNS
Sbjct: 580 RYEIVS*KQLY*LWL*EHWNIEQIQLGTKNS 488
>gb|BU989679.1|BU989679 HF22G11r HF Hordeum vulgare subsp. vulgare cDNA clone HF22G11
5-PRIME, mRNA sequence
Length = 609
Score = 305 bits (660), Expect(2) = 2e-083
Identities = 131/142 (92%), Positives = 135/142 (95%)
Frame = +3 / +1
Query: 60 AATATARMPFKRFVEIGRVALVNYGKDYGRLVVIVDVVDQNRALVDAPDMVRCQVNFKRL 239
A A A+MPFKRFVEIGRVALVNYGKDYGRLVVIVDVVDQNRALVDAPDM+RCQ+NFKRL
Sbjct: 28 AVAAAAKMPFKRFVEIGRVALVNYGKDYGRLVVIVDVVDQNRALVDAPDMIRCQMNFKRL 207
Query: 240 SLTDIKIDIKRVPKKTTLIKAMEEADVKTKWENSSWGKKLIVQKRRASLNDFDRFKVMLA 419
SLTDIKIDIKR+PKK TLIKAMEEADVKTKWENSSWGKKLIVQKRRASLNDFDRFKVMLA
Sbjct: 208 SLTDIKIDIKRIPKKATLIKAMEEADVKTKWENSSWGKKLIVQKRRASLNDFDRFKVMLA 387
Query: 420 KIKRGGAIRQELAKLKKASTA* 485
KIKRGGAIRQELAKLKK A*
Sbjct: 388 KIKRGGAIRQELAKLKKEVAA* 453
Score = 241 bits (521), Expect(2) = 3e-069
Identities = 112/142 (78%), Positives = 116/142 (81%)
Frame = -3 / -2
Query: 484 *AVDAFLSLASSCLIAPPLLIFASMTLNLSKSLSDALLFWTISFLPHELFSHLVFTSASS 305
*A +FLSLASSCLIAPPLLI A+MTLNLSKS SDALLF TISFLP ELFSHLVFTSASS
Sbjct: 452 *AATSFLSLASSCLIAPPLLILANMTLNLSKSFSDALLF*TISFLPQELFSHLVFTSASS 273
Query: 304 IALIRVVFLGTRLMSILMSVSESRLKFTWHLTISGASTSALFWXXXXXXXXXRP*SFP*F 125
+ALI+V FLG RLMSILMSVSE RLKF WHL ISGASTSA FW RP*S P*F
Sbjct: 272 MALIKVAFLGIRLMSILMSVSERRLKFIWHLIISGASTSARFWSTTSTMTTRRP*SLP*F 93
Query: 124 TRATRPISTNLLNGILAVAVAA 59
TRATRPISTNLLNGI A A A
Sbjct: 92 TRATRPISTNLLNGIFAAAATA 27
Score = 226 bits (488), Expect(2) = 2e-059
Identities = 95/146 (65%), Positives = 108/146 (73%)
Frame = -2 / -1
Query: 485 LSCGRLLKLGELLPDSTTPLNLRQHDFEPIKVIERCSPLLDNQXXXXXXXXXXXLHISFL 306
LS LL+LG+LL DSTTPLNL QHD EP+KVI+RCS LL+N+ HISFL
Sbjct: 453 LSSNLLLELGKLLSDSTTPLNLSQHDLEPVKVIQRCSSLLNNKLLAPGAVLPFGFHISFL 274
Query: 305 HRLDQGCLLGDTFDVNLDVSK*EPLEVHLAPDHIRGIHKCPVLVDHIDDDDETAIVLPVV 126
H LDQ CL GDT DVNLDV +*+ LEVHLAPDHIR + +CPVLVD +DDDDE A+VL VV
Sbjct: 273 HGLDQSCLFGDTLDVNLDVGQ*KTLEVHLAPDHIRSVDECPVLVDDVDDDDEAAVVLAVV 94
Query: 125 HQGHAPDLHEPLERHPRGGGGGAVKR 48
HQGH PDL EPLERH GG G +R
Sbjct: 93 HQGHPPDLDEPLERHLCGGCDGGEER 16
Score = 205 bits (442), Expect = 3e-052
Identities = 94/133 (70%), Positives = 103/133 (77%)
Frame = +2 / +3
Query: 74 REDAVQEVRGDRARGPGELREGLWPSRRHRRCGRPEQGTCGCP*YGQVPGELQAALTY*H 253
R+DAVQEVR DRA GPGELR+GL P RRHRR RPE GT *Y QVP ELQA+ T H
Sbjct: 42 RKDAVQEVRRDRAGGPGELRQGLRPPRRHRRRRRPEPGTRRRS*YDQVPDELQASFTDRH 221
Query: 254 QD*HQTCPQEDNPDQGDGGS*CEDQVGEQLMGQEADCPEEESIAQ*L**VQSHAGED*EG 433
QD*HQ PQ+ N DQG GGS*CE+Q+GEQL+GQEA C EE+SIA+*L* VQ H G D*EG
Sbjct: 222 QD*HQAYPQKGNFDQGHGGS*CENQMGEQLLGQEAYCSEEKSIAE*L*QVQGHVG*D*EG 401
Query: 434 WCYQARARQA*EG 472
WCYQ RA QA EG
Sbjct: 402 WCYQTRACQAQEG 440
Score = 92.7 bits (196), Expect(2) = 2e-028
Identities = 43/59 (72%), Positives = 47/59 (79%)
Frame = +1 / +2
Query: 310 KLM*RPSGRTAHGARS*LSRRGEHRSMTLIGSKSCWRRLRGVVLSGKSSPSLRRRPQLK 486
KLM*+P+GRTA GARS L RR EHR MTL GS+SCW RLRGVVLS KS PS RRR L+
Sbjct: 278 KLM*KPNGRTAPGARSLLFRREEHR*MTLTGSRSCWLRLRGVVLSDKSLPSSRRRLLLR 454
Score = 52.8 bits (109), Expect(2) = 2e-028
Identities = 30/50 (60%), Positives = 31/50 (62%)
Frame = +1 / +2
Query: 124 *TTGRTMAVXXXXXMWSTRTGHLWMPLIWSGAR*TSSGSHLLTSRLTSNV 273
*TT RT A STRTGH LI SGAR*TSS H TSRLTS+V
Sbjct: 92 *TTARTTAASSSSSTSSTRTGHSSTLLI*SGAR*TSSVFH*PTSRLTSSV 241
Score = 40.9 bits (83), Expect(2) = 3e-069
Identities = 17/32 (53%), Positives = 23/32 (71%)
Frame = -1 / -3
Query: 609 DKV*NGFTGNILVTLALTTLNRIADPTHNQKL 514
+K+*N F +++TLAL TL ADPT N+KL
Sbjct: 574 EKI*NSFLKTVVLTLALRTLEHRADPTWNKKL 479
Score = 24.4 bits (47), Expect(2) = 2e-083
Identities = 12/20 (60%), Positives = 15/20 (75%)
Frame = +2 / +3
Query: 515 SFWL*VGSAIRLSVVKARVT 574
SF VGSA+ SV+KARV+
Sbjct: 480 SFLFQVGSALCSSVLKARVS 539
Score = 23.1 bits (44), Expect(2) = 2e-059
Identities = 14/31 (45%), Positives = 19/31 (61%)
Frame = -2 / -1
Query: 605 KFEMGSQGTYW*LWL*QRSIELLIQLITKNS 513
++E+ S +*LWL*+ IQL TKNS
Sbjct: 570 RYEIVS*KQLY*LWL*EHWNIEQIQLGTKNS 478
>gb|BQ657976.1|BQ657976 HA06D06u HA Hordeum vulgare subsp. vulgare cDNA clone HA06D06
3-PRIME, mRNA sequence
Length = 603
Score = 305 bits (660), Expect(2) = 2e-083
Identities = 131/142 (92%), Positives = 135/142 (95%)
Frame = +3 / -1
Query: 60 AATATARMPFKRFVEIGRVALVNYGKDYGRLVVIVDVVDQNRALVDAPDMVRCQVNFKRL 239
A A A+MPFKRFVEIGRVALVNYGKDYGRLVVIVDVVDQNRALVDAPDM+RCQ+NFKRL
Sbjct: 600 AVAAAAKMPFKRFVEIGRVALVNYGKDYGRLVVIVDVVDQNRALVDAPDMIRCQMNFKRL 421
Query: 240 SLTDIKIDIKRVPKKTTLIKAMEEADVKTKWENSSWGKKLIVQKRRASLNDFDRFKVMLA 419
SLTDIKIDIKR+PKK TLIKAMEEADVKTKWENSSWGKKLIVQKRRASLNDFDRFKVMLA
Sbjct: 420 SLTDIKIDIKRIPKKATLIKAMEEADVKTKWENSSWGKKLIVQKRRASLNDFDRFKVMLA 241
Query: 420 KIKRGGAIRQELAKLKKASTA* 485
KIKRGGAIRQELAKLKK A*
Sbjct: 240 KIKRGGAIRQELAKLKKEVAA* 175
Score = 241 bits (521), Expect(2) = 3e-069
Identities = 112/142 (78%), Positives = 116/142 (81%)
Frame = -3 / +2
Query: 484 *AVDAFLSLASSCLIAPPLLIFASMTLNLSKSLSDALLFWTISFLPHELFSHLVFTSASS 305
*A +FLSLASSCLIAPPLLI A+MTLNLSKS SDALLF TISFLP ELFSHLVFTSASS
Sbjct: 176 *AATSFLSLASSCLIAPPLLILANMTLNLSKSFSDALLF*TISFLPQELFSHLVFTSASS 355
Query: 304 IALIRVVFLGTRLMSILMSVSESRLKFTWHLTISGASTSALFWXXXXXXXXXRP*SFP*F 125
+ALI+V FLG RLMSILMSVSE RLKF WHL ISGASTSA FW RP*S P*F
Sbjct: 356 MALIKVAFLGIRLMSILMSVSERRLKFIWHLIISGASTSARFWSTTSTMTTRRP*SLP*F 535
Query: 124 TRATRPISTNLLNGILAVAVAA 59
TRATRPISTNLLNGI A A A
Sbjct: 536 TRATRPISTNLLNGIFAAAATA 601
Score = 224 bits (484), Expect(2) = 7e-059
Identities = 94/142 (66%), Positives = 106/142 (74%)
Frame = -2 / +1
Query: 485 LSCGRLLKLGELLPDSTTPLNLRQHDFEPIKVIERCSPLLDNQXXXXXXXXXXXLHISFL 306
LS LL+LG+LL DSTTPLNL QHD EP+KVI+RCS LL+N+ HISFL
Sbjct: 175 LSSNLLLELGKLLSDSTTPLNLSQHDLEPVKVIQRCSSLLNNKLLAPGAVLPFGFHISFL 354
Query: 305 HRLDQGCLLGDTFDVNLDVSK*EPLEVHLAPDHIRGIHKCPVLVDHIDDDDETAIVLPVV 126
H LDQ CL GDT DVNLDV +*+ LEVHLAPDHIR + +CPVLVD +DDDDE A+VL VV
Sbjct: 355 HGLDQSCLFGDTLDVNLDVGQ*KTLEVHLAPDHIRSVDECPVLVDDVDDDDEAAVVLAVV 534
Query: 125 HQGHAPDLHEPLERHPRGGGGG 60
HQGH PDL EPLERH GG G
Sbjct: 535 HQGHPPDLDEPLERHLCGGCDG 600
Score = 205 bits (442), Expect = 3e-052
Identities = 94/133 (70%), Positives = 103/133 (77%)
Frame = +2 / -3
Query: 74 REDAVQEVRGDRARGPGELREGLWPSRRHRRCGRPEQGTCGCP*YGQVPGELQAALTY*H 253
R+DAVQEVR DRA GPGELR+GL P RRHRR RPE GT *Y QVP ELQA+ T H
Sbjct: 586 RKDAVQEVRRDRAGGPGELRQGLRPPRRHRRRRRPEPGTRRRS*YDQVPDELQASFTDRH 407
Query: 254 QD*HQTCPQEDNPDQGDGGS*CEDQVGEQLMGQEADCPEEESIAQ*L**VQSHAGED*EG 433
QD*HQ PQ+ N DQG GGS*CE+Q+GEQL+GQEA C EE+SIA+*L* VQ H G D*EG
Sbjct: 406 QD*HQAYPQKGNFDQGHGGS*CENQMGEQLLGQEAYCSEEKSIAE*L*QVQGHVG*D*EG 227
Query: 434 WCYQARARQA*EG 472
WCYQ RA QA EG
Sbjct: 226 WCYQTRACQAQEG 188
Score = 92.7 bits (196), Expect(2) = 2e-028
Identities = 43/59 (72%), Positives = 47/59 (79%)
Frame = +1 / -2
Query: 310 KLM*RPSGRTAHGARS*LSRRGEHRSMTLIGSKSCWRRLRGVVLSGKSSPSLRRRPQLK 486
KLM*+P+GRTA GARS L RR EHR MTL GS+SCW RLRGVVLS KS PS RRR L+
Sbjct: 350 KLM*KPNGRTAPGARSLLFRREEHR*MTLTGSRSCWLRLRGVVLSDKSLPSSRRRLLLR 174
Score = 52.8 bits (109), Expect(2) = 2e-028
Identities = 30/50 (60%), Positives = 31/50 (62%)
Frame = +1 / -2
Query: 124 *TTGRTMAVXXXXXMWSTRTGHLWMPLIWSGAR*TSSGSHLLTSRLTSNV 273
*TT RT A STRTGH LI SGAR*TSS H TSRLTS+V
Sbjct: 536 *TTARTTAASSSSSTSSTRTGHSSTLLI*SGAR*TSSVFH*PTSRLTSSV 387
Score = 40.9 bits (83), Expect(2) = 3e-069
Identities = 17/32 (53%), Positives = 23/32 (71%)
Frame = -1 / +3
Query: 609 DKV*NGFTGNILVTLALTTLNRIADPTHNQKL 514
+K+*N F +++TLAL TL ADPT N+KL
Sbjct: 54 EKI*NSFLKTVVLTLALRTLEHRADPTWNKKL 149
Score = 24.4 bits (47), Expect(2) = 2e-083
Identities = 12/20 (60%), Positives = 15/20 (75%)
Frame = +2 / -3
Query: 515 SFWL*VGSAIRLSVVKARVT 574
SF VGSA+ SV+KARV+
Sbjct: 148 SFLFQVGSALCSSVLKARVS 89
Score = 23.1 bits (44), Expect(2) = 7e-059
Identities = 14/31 (45%), Positives = 19/31 (61%)
Frame = -2 / +1
Query: 605 KFEMGSQGTYW*LWL*QRSIELLIQLITKNS 513
++E+ S +*LWL*+ IQL TKNS
Sbjct: 58 RYEIVS*KQLY*LWL*EHWNIEQIQLGTKNS 150
>gb|CA011664.1|CA011664 HT03D07r HT Hordeum vulgare subsp. vulgare cDNA clone HT03D07
5-PRIME, mRNA sequence
Length = 586
Score = 305 bits (660), Expect(2) = 2e-083
Identities = 131/142 (92%), Positives = 135/142 (95%)
Frame = +3 / +1
Query: 60 AATATARMPFKRFVEIGRVALVNYGKDYGRLVVIVDVVDQNRALVDAPDMVRCQVNFKRL 239
A A A+MPFKRFVEIGRVALVNYGKDYGRLVVIVDVVDQNRALVDAPDM+RCQ+NFKRL
Sbjct: 40 AVAAAAKMPFKRFVEIGRVALVNYGKDYGRLVVIVDVVDQNRALVDAPDMIRCQMNFKRL 219
Query: 240 SLTDIKIDIKRVPKKTTLIKAMEEADVKTKWENSSWGKKLIVQKRRASLNDFDRFKVMLA 419
SLTDIKIDIKR+PKK TLIKAMEEADVKTKWENSSWGKKLIVQKRRASLNDFDRFKVMLA
Sbjct: 220 SLTDIKIDIKRIPKKATLIKAMEEADVKTKWENSSWGKKLIVQKRRASLNDFDRFKVMLA 399
Query: 420 KIKRGGAIRQELAKLKKASTA* 485
KIKRGGAIRQELAKLKK A*
Sbjct: 400 KIKRGGAIRQELAKLKKEVAA* 465
Score = 241 bits (521), Expect(2) = 3e-069
Identities = 112/142 (78%), Positives = 116/142 (81%)
Frame = -3 / -3
Query: 484 *AVDAFLSLASSCLIAPPLLIFASMTLNLSKSLSDALLFWTISFLPHELFSHLVFTSASS 305
*A +FLSLASSCLIAPPLLI A+MTLNLSKS SDALLF TISFLP ELFSHLVFTSASS
Sbjct: 464 *AATSFLSLASSCLIAPPLLILANMTLNLSKSFSDALLF*TISFLPQELFSHLVFTSASS 285
Query: 304 IALIRVVFLGTRLMSILMSVSESRLKFTWHLTISGASTSALFWXXXXXXXXXRP*SFP*F 125
+ALI+V FLG RLMSILMSVSE RLKF WHL ISGASTSA FW RP*S P*F
Sbjct: 284 MALIKVAFLGIRLMSILMSVSERRLKFIWHLIISGASTSARFWSTTSTMTTRRP*SLP*F 105
Query: 124 TRATRPISTNLLNGILAVAVAA 59
TRATRPISTNLLNGI A A A
Sbjct: 104 TRATRPISTNLLNGIFAAAATA 39
Score = 226 bits (488), Expect(2) = 2e-059
Identities = 95/146 (65%), Positives = 108/146 (73%)
Frame = -2 / -2
Query: 485 LSCGRLLKLGELLPDSTTPLNLRQHDFEPIKVIERCSPLLDNQXXXXXXXXXXXLHISFL 306
LS LL+LG+LL DSTTPLNL QHD EP+KVI+RCS LL+N+ HISFL
Sbjct: 465 LSSNLLLELGKLLSDSTTPLNLSQHDLEPVKVIQRCSSLLNNKLLAPGAVLPFGFHISFL 286
Query: 305 HRLDQGCLLGDTFDVNLDVSK*EPLEVHLAPDHIRGIHKCPVLVDHIDDDDETAIVLPVV 126
H LDQ CL GDT DVNLDV +*+ LEVHLAPDHIR + +CPVLVD +DDDDE A+VL VV
Sbjct: 285 HGLDQSCLFGDTLDVNLDVGQ*KTLEVHLAPDHIRSVDECPVLVDDVDDDDEAAVVLAVV 106
Query: 125 HQGHAPDLHEPLERHPRGGGGGAVKR 48
HQGH PDL EPLERH GG G +R
Sbjct: 105 HQGHPPDLDEPLERHLCGGCDGGEER 28
Score = 205 bits (442), Expect = 3e-052
Identities = 94/133 (70%), Positives = 103/133 (77%)
Frame = +2 / +3
Query: 74 REDAVQEVRGDRARGPGELREGLWPSRRHRRCGRPEQGTCGCP*YGQVPGELQAALTY*H 253
R+DAVQEVR DRA GPGELR+GL P RRHRR RPE GT *Y QVP ELQA+ T H
Sbjct: 54 RKDAVQEVRRDRAGGPGELRQGLRPPRRHRRRRRPEPGTRRRS*YDQVPDELQASFTDRH 233
Query: 254 QD*HQTCPQEDNPDQGDGGS*CEDQVGEQLMGQEADCPEEESIAQ*L**VQSHAGED*EG 433
QD*HQ PQ+ N DQG GGS*CE+Q+GEQL+GQEA C EE+SIA+*L* VQ H G D*EG
Sbjct: 234 QD*HQAYPQKGNFDQGHGGS*CENQMGEQLLGQEAYCSEEKSIAE*L*QVQGHVG*D*EG 413
Query: 434 WCYQARARQA*EG 472
WCYQ RA QA EG
Sbjct: 414 WCYQTRACQAQEG 452
Score = 92.7 bits (196), Expect(2) = 2e-028
Identities = 43/59 (72%), Positives = 47/59 (79%)
Frame = +1 / +2
Query: 310 KLM*RPSGRTAHGARS*LSRRGEHRSMTLIGSKSCWRRLRGVVLSGKSSPSLRRRPQLK 486
KLM*+P+GRTA GARS L RR EHR MTL GS+SCW RLRGVVLS KS PS RRR L+
Sbjct: 290 KLM*KPNGRTAPGARSLLFRREEHR*MTLTGSRSCWLRLRGVVLSDKSLPSSRRRLLLR 466
Score = 52.8 bits (109), Expect(2) = 2e-028
Identities = 30/50 (60%), Positives = 31/50 (62%)
Frame = +1 / +2
Query: 124 *TTGRTMAVXXXXXMWSTRTGHLWMPLIWSGAR*TSSGSHLLTSRLTSNV 273
*TT RT A STRTGH LI SGAR*TSS H TSRLTS+V
Sbjct: 104 *TTARTTAASSSSSTSSTRTGHSSTLLI*SGAR*TSSVFH*PTSRLTSSV 253
Score = 40.9 bits (83), Expect(2) = 3e-069
Identities = 17/32 (53%), Positives = 23/32 (71%)
Frame = -1 / -1
Query: 609 DKV*NGFTGNILVTLALTTLNRIADPTHNQKL 514
+K+*N F +++TLAL TL ADPT N+KL
Sbjct: 586 EKI*NSFLKTVVLTLALRTLEHRADPTWNKKL 491
Score = 24.4 bits (47), Expect(2) = 2e-083
Identities = 12/20 (60%), Positives = 15/20 (75%)
Frame = +2 / +3
Query: 515 SFWL*VGSAIRLSVVKARVT 574
SF VGSA+ SV+KARV+
Sbjct: 492 SFLFQVGSALCSSVLKARVS 551
Score = 23.1 bits (44), Expect(2) = 2e-059
Identities = 14/31 (45%), Positives = 19/31 (61%)
Frame = -2 / -2
Query: 605 KFEMGSQGTYW*LWL*QRSIELLIQLITKNS 513
++E+ S +*LWL*+ IQL TKNS
Sbjct: 582 RYEIVS*KQLY*LWL*EHWNIEQIQLGTKNS 490
>gb|CB883479.1|CB883479 HQ02G05w HQ Hordeum vulgare subsp. vulgare cDNA clone HQ02G05
3-PRIME, mRNA sequence
Length = 582
Score = 305 bits (660), Expect(2) = 2e-083
Identities = 131/142 (92%), Positives = 135/142 (95%)
Frame = +3 / +2
Query: 60 AATATARMPFKRFVEIGRVALVNYGKDYGRLVVIVDVVDQNRALVDAPDMVRCQVNFKRL 239
A A A+MPFKRFVEIGRVALVNYGKDYGRLVVIVDVVDQNRALVDAPDM+RCQ+NFKRL
Sbjct: 29 AVAAAAKMPFKRFVEIGRVALVNYGKDYGRLVVIVDVVDQNRALVDAPDMIRCQMNFKRL 208
Query: 240 SLTDIKIDIKRVPKKTTLIKAMEEADVKTKWENSSWGKKLIVQKRRASLNDFDRFKVMLA 419
SLTDIKIDIKR+PKK TLIKAMEEADVKTKWENSSWGKKLIVQKRRASLNDFDRFKVMLA
Sbjct: 209 SLTDIKIDIKRIPKKATLIKAMEEADVKTKWENSSWGKKLIVQKRRASLNDFDRFKVMLA 388
Query: 420 KIKRGGAIRQELAKLKKASTA* 485
KIKRGGAIRQELAKLKK A*
Sbjct: 389 KIKRGGAIRQELAKLKKEVAA* 454
Score = 241 bits (521), Expect(2) = 2e-069
Identities = 112/142 (78%), Positives = 116/142 (81%)
Frame = -3 / -1
Query: 484 *AVDAFLSLASSCLIAPPLLIFASMTLNLSKSLSDALLFWTISFLPHELFSHLVFTSASS 305
*A +FLSLASSCLIAPPLLI A+MTLNLSKS SDALLF TISFLP ELFSHLVFTSASS
Sbjct: 453 *AATSFLSLASSCLIAPPLLILANMTLNLSKSFSDALLF*TISFLPQELFSHLVFTSASS 274
Query: 304 IALIRVVFLGTRLMSILMSVSESRLKFTWHLTISGASTSALFWXXXXXXXXXRP*SFP*F 125
+ALI+V FLG RLMSILMSVSE RLKF WHL ISGASTSA FW RP*S P*F
Sbjct: 273 MALIKVAFLGIRLMSILMSVSERRLKFIWHLIISGASTSARFWSTTSTMTTRRP*SLP*F 94
Query: 124 TRATRPISTNLLNGILAVAVAA 59
TRATRPISTNLLNGI A A A
Sbjct: 93 TRATRPISTNLLNGIFAAAATA 28
Score = 226 bits (488), Expect(2) = 2e-059
Identities = 95/146 (65%), Positives = 108/146 (73%)
Frame = -2 / -3
Query: 485 LSCGRLLKLGELLPDSTTPLNLRQHDFEPIKVIERCSPLLDNQXXXXXXXXXXXLHISFL 306
LS LL+LG+LL DSTTPLNL QHD EP+KVI+RCS LL+N+ HISFL
Sbjct: 454 LSSNLLLELGKLLSDSTTPLNLSQHDLEPVKVIQRCSSLLNNKLLAPGAVLPFGFHISFL 275
Query: 305 HRLDQGCLLGDTFDVNLDVSK*EPLEVHLAPDHIRGIHKCPVLVDHIDDDDETAIVLPVV 126
H LDQ CL GDT DVNLDV +*+ LEVHLAPDHIR + +CPVLVD +DDDDE A+VL VV
Sbjct: 274 HGLDQSCLFGDTLDVNLDVGQ*KTLEVHLAPDHIRSVDECPVLVDDVDDDDEAAVVLAVV 95
Query: 125 HQGHAPDLHEPLERHPRGGGGGAVKR 48
HQGH PDL EPLERH GG G +R
Sbjct: 94 HQGHPPDLDEPLERHLCGGCDGGEER 17
Score = 205 bits (442), Expect = 3e-052
Identities = 94/133 (70%), Positives = 103/133 (77%)
Frame = +2 / +1
Query: 74 REDAVQEVRGDRARGPGELREGLWPSRRHRRCGRPEQGTCGCP*YGQVPGELQAALTY*H 253
R+DAVQEVR DRA GPGELR+GL P RRHRR RPE GT *Y QVP ELQA+ T H
Sbjct: 43 RKDAVQEVRRDRAGGPGELRQGLRPPRRHRRRRRPEPGTRRRS*YDQVPDELQASFTDRH 222
Query: 254 QD*HQTCPQEDNPDQGDGGS*CEDQVGEQLMGQEADCPEEESIAQ*L**VQSHAGED*EG 433
QD*HQ PQ+ N DQG GGS*CE+Q+GEQL+GQEA C EE+SIA+*L* VQ H G D*EG
Sbjct: 223 QD*HQAYPQKGNFDQGHGGS*CENQMGEQLLGQEAYCSEEKSIAE*L*QVQGHVG*D*EG 402
Query: 434 WCYQARARQA*EG 472
WCYQ RA QA EG
Sbjct: 403 WCYQTRACQAQEG 441
Score = 92.7 bits (196), Expect(2) = 2e-028
Identities = 43/59 (72%), Positives = 47/59 (79%)
Frame = +1 / +3
Query: 310 KLM*RPSGRTAHGARS*LSRRGEHRSMTLIGSKSCWRRLRGVVLSGKSSPSLRRRPQLK 486
KLM*+P+GRTA GARS L RR EHR MTL GS+SCW RLRGVVLS KS PS RRR L+
Sbjct: 279 KLM*KPNGRTAPGARSLLFRREEHR*MTLTGSRSCWLRLRGVVLSDKSLPSSRRRLLLR 455
Score = 52.8 bits (109), Expect(2) = 2e-028
Identities = 30/50 (60%), Positives = 31/50 (62%)
Frame = +1 / +3
Query: 124 *TTGRTMAVXXXXXMWSTRTGHLWMPLIWSGAR*TSSGSHLLTSRLTSNV 273
*TT RT A STRTGH LI SGAR*TSS H TSRLTS+V
Sbjct: 93 *TTARTTAASSSSSTSSTRTGHSSTLLI*SGAR*TSSVFH*PTSRLTSSV 242
Score = 41.4 bits (84), Expect(2) = 2e-069
Identities = 17/32 (53%), Positives = 23/32 (71%)
Frame = -1 / -2
Query: 609 DKV*NGFTGNILVTLALTTLNRIADPTHNQKL 514
+K+*N F +++TLAL TL ADPT N+KL
Sbjct: 575 EKI*NSFLXTVVLTLALRTLEHRADPTWNKKL 480
Score = 24.4 bits (47), Expect(2) = 2e-083
Identities = 12/20 (60%), Positives = 15/20 (75%)
Frame = +2 / +1
Query: 515 SFWL*VGSAIRLSVVKARVT 574
SF VGSA+ SV+KARV+
Sbjct: 481 SFLFQVGSALCSSVLKARVS 540
Score = 23.5 bits (45), Expect(2) = 2e-059
Identities = 14/31 (45%), Positives = 19/31 (61%)
Frame = -2 / -3
Query: 605 KFEMGSQGTYW*LWL*QRSIELLIQLITKNS 513
++E+ S +*LWL*+ IQL TKNS
Sbjct: 571 RYEIVS*XQLY*LWL*EHWNIEQIQLGTKNS 479
>gb|BU983927.1|BU983927 HA31H16r HA Hordeum vulgare subsp. vulgare cDNA clone HA31H16
5-PRIME, mRNA sequence
Length = 604
Score = 304 bits (659), Expect(2) = 3e-083
Identities = 130/141 (92%), Positives = 134/141 (95%)
Frame = +3 / +3
Query: 60 AATATARMPFKRFVEIGRVALVNYGKDYGRLVVIVDVVDQNRALVDAPDMVRCQVNFKRL 239
A A A+MPFKRFVEIGRVALVNYGKDYGRLVVIVDVVDQNRALVDAPDM+RCQ+NFKRL
Sbjct: 39 AVAAAAKMPFKRFVEIGRVALVNYGKDYGRLVVIVDVVDQNRALVDAPDMIRCQMNFKRL 218
Query: 240 SLTDIKIDIKRVPKKTTLIKAMEEADVKTKWENSSWGKKLIVQKRRASLNDFDRFKVMLA 419
SLTDIKIDIKR+PKK TLIKAMEEADVKTKWENSSWGKKLIVQKRRASLNDFDRFKVMLA
Sbjct: 219 SLTDIKIDIKRIPKKATLIKAMEEADVKTKWENSSWGKKLIVQKRRASLNDFDRFKVMLA 398
Query: 420 KIKRGGAIRQELAKLKKASTA 482
KIKRGGAIRQELAKLKK A
Sbjct: 399 KIKRGGAIRQELAKLKKEVAA 461
Score = 241 bits (521), Expect(2) = 3e-069
Identities = 112/142 (78%), Positives = 116/142 (81%)
Frame = -3 / -1
Query: 484 *AVDAFLSLASSCLIAPPLLIFASMTLNLSKSLSDALLFWTISFLPHELFSHLVFTSASS 305
*A +FLSLASSCLIAPPLLI A+MTLNLSKS SDALLF TISFLP ELFSHLVFTSASS
Sbjct: 463 *AATSFLSLASSCLIAPPLLILANMTLNLSKSFSDALLF*TISFLPQELFSHLVFTSASS 284
Query: 304 IALIRVVFLGTRLMSILMSVSESRLKFTWHLTISGASTSALFWXXXXXXXXXRP*SFP*F 125
+ALI+V FLG RLMSILMSVSE RLKF WHL ISGASTSA FW RP*S P*F
Sbjct: 283 MALIKVAFLGIRLMSILMSVSERRLKFIWHLIISGASTSARFWSTTSTMTTRRP*SLP*F 104
Query: 124 TRATRPISTNLLNGILAVAVAA 59
TRATRPISTNLLNGI A A A
Sbjct: 103 TRATRPISTNLLNGIFAAAATA 38
Score = 224 bits (484), Expect(2) = 7e-059
Identities = 94/145 (64%), Positives = 107/145 (73%)
Frame = -2 / -3
Query: 482 SCGRLLKLGELLPDSTTPLNLRQHDFEPIKVIERCSPLLDNQXXXXXXXXXXXLHISFLH 303
S LL+LG+LL DSTTPLNL QHD EP+KVI+RCS LL+N+ HISFLH
Sbjct: 461 SSNLLLELGKLLSDSTTPLNLSQHDLEPVKVIQRCSSLLNNKLLAPGAVLPFGFHISFLH 282
Query: 302 RLDQGCLLGDTFDVNLDVSK*EPLEVHLAPDHIRGIHKCPVLVDHIDDDDETAIVLPVVH 123
LDQ CL GDT DVNLDV +*+ LEVHLAPDHIR + +CPVLVD +DDDDE A+VL VVH
Sbjct: 281 GLDQSCLFGDTLDVNLDVGQ*KTLEVHLAPDHIRSVDECPVLVDDVDDDDEAAVVLAVVH 102
Query: 122 QGHAPDLHEPLERHPRGGGGGAVKR 48
QGH PDL EPLERH GG G +R
Sbjct: 101 QGHPPDLDEPLERHLCGGCDGGEER 27
Score = 205 bits (442), Expect = 3e-052
Identities = 94/133 (70%), Positives = 103/133 (77%)
Frame = +2 / +2
Query: 74 REDAVQEVRGDRARGPGELREGLWPSRRHRRCGRPEQGTCGCP*YGQVPGELQAALTY*H 253
R+DAVQEVR DRA GPGELR+GL P RRHRR RPE GT *Y QVP ELQA+ T H
Sbjct: 53 RKDAVQEVRRDRAGGPGELRQGLRPPRRHRRRRRPEPGTRRRS*YDQVPDELQASFTDRH 232
Query: 254 QD*HQTCPQEDNPDQGDGGS*CEDQVGEQLMGQEADCPEEESIAQ*L**VQSHAGED*EG 433
QD*HQ PQ+ N DQG GGS*CE+Q+GEQL+GQEA C EE+SIA+*L* VQ H G D*EG
Sbjct: 233 QD*HQAYPQKGNFDQGHGGS*CENQMGEQLLGQEAYCSEEKSIAE*L*QVQGHVG*D*EG 412
Query: 434 WCYQARARQA*EG 472
WCYQ RA QA EG
Sbjct: 413 WCYQTRACQAQEG 451
Score = 92.3 bits (195), Expect(2) = 3e-028
Identities = 42/55 (76%), Positives = 45/55 (81%)
Frame = +1 / +1
Query: 310 KLM*RPSGRTAHGARS*LSRRGEHRSMTLIGSKSCWRRLRGVVLSGKSSPSLRRR 474
KLM*+P+GRTA GARS L RR EHR MTL GS+SCW RLRGVVLS KS PS RRR
Sbjct: 289 KLM*KPNGRTAPGARSLLFRREEHR*MTLTGSRSCWLRLRGVVLSDKSLPSSRRR 453
Score = 52.8 bits (109), Expect(2) = 3e-028
Identities = 30/50 (60%), Positives = 31/50 (62%)
Frame = +1 / +1
Query: 124 *TTGRTMAVXXXXXMWSTRTGHLWMPLIWSGAR*TSSGSHLLTSRLTSNV 273
*TT RT A STRTGH LI SGAR*TSS H TSRLTS+V
Sbjct: 103 *TTARTTAASSSSSTSSTRTGHSSTLLI*SGAR*TSSVFH*PTSRLTSSV 252
Score = 40.9 bits (83), Expect(2) = 3e-069
Identities = 17/32 (53%), Positives = 23/32 (71%)
Frame = -1 / -2
Query: 609 DKV*NGFTGNILVTLALTTLNRIADPTHNQKL 514
+K+*N F +++TLAL TL ADPT N+KL
Sbjct: 585 EKI*NSFLKTVVLTLALRTLEHRADPTWNKKL 490
Score = 24.4 bits (47), Expect(2) = 3e-083
Identities = 12/20 (60%), Positives = 15/20 (75%)
Frame = +2 / +2
Query: 515 SFWL*VGSAIRLSVVKARVT 574
SF VGSA+ SV+KARV+
Sbjct: 491 SFLFQVGSALCSSVLKARVS 550
Score = 23.1 bits (44), Expect(2) = 7e-059
Identities = 14/31 (45%), Positives = 19/31 (61%)
Frame = -2 / -3
Query: 605 KFEMGSQGTYW*LWL*QRSIELLIQLITKNS 513
++E+ S +*LWL*+ IQL TKNS
Sbjct: 581 RYEIVS*KQLY*LWL*EHWNIEQIQLGTKNS 489
>gb|CA008553.1|CA008553 HU11F06r HU Hordeum vulgare subsp. vulgare cDNA clone HU11F06
5-PRIME, mRNA sequence
Length = 550
Score = 304 bits (659), Expect(2) = 3e-083
Identities = 130/141 (92%), Positives = 134/141 (95%)
Frame = +3 / +2
Query: 60 AATATARMPFKRFVEIGRVALVNYGKDYGRLVVIVDVVDQNRALVDAPDMVRCQVNFKRL 239
A A A+MPFKRFVEIGRVALVNYGKDYGRLVVIVDVVDQNRALVDAPDM+RCQ+NFKRL
Sbjct: 20 AVAAAAKMPFKRFVEIGRVALVNYGKDYGRLVVIVDVVDQNRALVDAPDMIRCQMNFKRL 199
Query: 240 SLTDIKIDIKRVPKKTTLIKAMEEADVKTKWENSSWGKKLIVQKRRASLNDFDRFKVMLA 419
SLTDIKIDIKR+PKK TLIKAMEEADVKTKWENSSWGKKLIVQKRRASLNDFDRFKVMLA
Sbjct: 200 SLTDIKIDIKRIPKKATLIKAMEEADVKTKWENSSWGKKLIVQKRRASLNDFDRFKVMLA 379
Query: 420 KIKRGGAIRQELAKLKKASTA 482
KIKRGGAIRQELAKLKK A
Sbjct: 380 KIKRGGAIRQELAKLKKEVAA 442
Score = 241 bits (521), Expect(2) = 6e-067
Identities = 112/142 (78%), Positives = 116/142 (81%)
Frame = -3 / -2
Query: 484 *AVDAFLSLASSCLIAPPLLIFASMTLNLSKSLSDALLFWTISFLPHELFSHLVFTSASS 305
*A +FLSLASSCLIAPPLLI A+MTLNLSKS SDALLF TISFLP ELFSHLVFTSASS
Sbjct: 444 *AATSFLSLASSCLIAPPLLILANMTLNLSKSFSDALLF*TISFLPQELFSHLVFTSASS 265
Query: 304 IALIRVVFLGTRLMSILMSVSESRLKFTWHLTISGASTSALFWXXXXXXXXXRP*SFP*F 125
+ALI+V FLG RLMSILMSVSE RLKF WHL ISGASTSA FW RP*S P*F
Sbjct: 264 MALIKVAFLGIRLMSILMSVSERRLKFIWHLIISGASTSARFWSTTSTMTTRRP*SLP*F 85
Query: 124 TRATRPISTNLLNGILAVAVAA 59
TRATRPISTNLLNGI A A A
Sbjct: 84 TRATRPISTNLLNGIFAAAATA 19
Score = 222 bits (480), Expect = 1e-057
Identities = 93/141 (65%), Positives = 105/141 (74%)
Frame = -2 / -1
Query: 482 SCGRLLKLGELLPDSTTPLNLRQHDFEPIKVIERCSPLLDNQXXXXXXXXXXXLHISFLH 303
S LL+LG+LL DSTTPLNL QHD EP+KVI+RCS LL+N+ HISFLH
Sbjct: 442 SSNLLLELGKLLSDSTTPLNLSQHDLEPVKVIQRCSSLLNNKLLAPGAVLPFGFHISFLH 263
Query: 302 RLDQGCLLGDTFDVNLDVSK*EPLEVHLAPDHIRGIHKCPVLVDHIDDDDETAIVLPVVH 123
LDQ CL GDT DVNLDV +*+ LEVHLAPDHIR + +CPVLVD +DDDDE A+VL VVH
Sbjct: 262 GLDQSCLFGDTLDVNLDVGQ*KTLEVHLAPDHIRSVDECPVLVDDVDDDDEAAVVLAVVH 83
Query: 122 QGHAPDLHEPLERHPRGGGGG 60
QGH PDL EPLERH GG G
Sbjct: 82 QGHPPDLDEPLERHLCGGCDG 20
Score = 205 bits (442), Expect = 3e-052
Identities = 94/133 (70%), Positives = 103/133 (77%)
Frame = +2 / +1
Query: 74 REDAVQEVRGDRARGPGELREGLWPSRRHRRCGRPEQGTCGCP*YGQVPGELQAALTY*H 253
R+DAVQEVR DRA GPGELR+GL P RRHRR RPE GT *Y QVP ELQA+ T H
Sbjct: 34 RKDAVQEVRRDRAGGPGELRQGLRPPRRHRRRRRPEPGTRRRS*YDQVPDELQASFTDRH 213
Query: 254 QD*HQTCPQEDNPDQGDGGS*CEDQVGEQLMGQEADCPEEESIAQ*L**VQSHAGED*EG 433
QD*HQ PQ+ N DQG GGS*CE+Q+GEQL+GQEA C EE+SIA+*L* VQ H G D*EG
Sbjct: 214 QD*HQAYPQKGNFDQGHGGS*CENQMGEQLLGQEAYCSEEKSIAE*L*QVQGHVG*D*EG 393
Query: 434 WCYQARARQA*EG 472
WCYQ RA QA EG
Sbjct: 394 WCYQTRACQAQEG 432
Score = 92.3 bits (195), Expect(2) = 3e-028
Identities = 42/55 (76%), Positives = 45/55 (81%)
Frame = +1 / +3
Query: 310 KLM*RPSGRTAHGARS*LSRRGEHRSMTLIGSKSCWRRLRGVVLSGKSSPSLRRR 474
KLM*+P+GRTA GARS L RR EHR MTL GS+SCW RLRGVVLS KS PS RRR
Sbjct: 270 KLM*KPNGRTAPGARSLLFRREEHR*MTLTGSRSCWLRLRGVVLSDKSLPSSRRR 434
Score = 52.8 bits (109), Expect(2) = 3e-028
Identities = 30/50 (60%), Positives = 31/50 (62%)
Frame = +1 / +3
Query: 124 *TTGRTMAVXXXXXMWSTRTGHLWMPLIWSGAR*TSSGSHLLTSRLTSNV 273
*TT RT A STRTGH LI SGAR*TSS H TSRLTS+V
Sbjct: 84 *TTARTTAASSSSSTSSTRTGHSSTLLI*SGAR*TSSVFH*PTSRLTSSV 233
Score = 33.1 bits (66), Expect(2) = 6e-067
Identities = 14/26 (53%), Positives = 18/26 (69%)
Frame = -1 / -3
Query: 591 FTGNILVTLALTTLNRIADPTHNQKL 514
F +++TLAL TL ADPT N+KL
Sbjct: 548 FLKTVVLTLALRTLEHRADPTWNKKL 471
Score = 24.4 bits (47), Expect(2) = 3e-083
Identities = 12/20 (60%), Positives = 15/20 (75%)
Frame = +2 / +1
Query: 515 SFWL*VGSAIRLSVVKARVT 574
SF VGSA+ SV+KARV+
Sbjct: 472 SFLFQVGSALCSSVLKARVS 531
>gb|BE195642.3|BE195642 HVSMEh0090A15f Hordeum vulgare 5-45 DAP spike EST library
HVcDNA0009 (5 to 45 DAP) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEh0090A15f, mRNA sequence
Length = 917
Score = 303 bits (656), Expect(2) = 7e-083
Identities = 130/139 (93%), Positives = 134/139 (96%)
Frame = +3 / +1
Query: 69 ATARMPFKRFVEIGRVALVNYGKDYGRLVVIVDVVDQNRALVDAPDMVRCQVNFKRLSLT 248
A A+MPFKRFVEIGRVALVNYGKDYGRLVVIVDVVDQNRALVDAPDM+RCQ+NFKRLSLT
Sbjct: 28 AAAKMPFKRFVEIGRVALVNYGKDYGRLVVIVDVVDQNRALVDAPDMIRCQMNFKRLSLT 207
Query: 249 DIKIDIKRVPKKTTLIKAMEEADVKTKWENSSWGKKLIVQKRRASLNDFDRFKVMLAKIK 428
DIKIDIKR+PKK TLIKAMEEADVKTKWENSSWGKKLIVQKRRASLNDFDRFKVMLAKIK
Sbjct: 208 DIKIDIKRIPKKATLIKAMEEADVKTKWENSSWGKKLIVQKRRASLNDFDRFKVMLAKIK 387
Query: 429 RGGAIRQELAKLKKASTA* 485
RGGAIRQELAKLKK A*
Sbjct: 388 RGGAIRQELAKLKKEVAA* 444
Score = 239 bits (517), Expect(2) = 1e-068
Identities = 111/139 (79%), Positives = 115/139 (82%)
Frame = -3 / -1
Query: 484 *AVDAFLSLASSCLIAPPLLIFASMTLNLSKSLSDALLFWTISFLPHELFSHLVFTSASS 305
*A +FLSLASSCLIAPPLLI A+MTLNLSKS SDALLF TISFLP ELFSHLVFTSASS
Sbjct: 443 *AATSFLSLASSCLIAPPLLILANMTLNLSKSFSDALLF*TISFLPQELFSHLVFTSASS 264
Query: 304 IALIRVVFLGTRLMSILMSVSESRLKFTWHLTISGASTSALFWXXXXXXXXXRP*SFP*F 125
+ALI+V FLG RLMSILMSVSE RLKF WHL ISGASTSA FW RP*S P*F
Sbjct: 263 MALIKVAFLGIRLMSILMSVSERRLKFIWHLIISGASTSARFWSTTSTMTTRRP*SLP*F 84
Query: 124 TRATRPISTNLLNGILAVA 68
TRATRPISTNLLNGI A A
Sbjct: 83 TRATRPISTNLLNGIFAAA 27
Score = 229 bits (494), Expect(2) = 3e-060
Identities = 95/139 (68%), Positives = 107/139 (76%)
Frame = -2 / -3
Query: 485 LSCGRLLKLGELLPDSTTPLNLRQHDFEPIKVIERCSPLLDNQXXXXXXXXXXXLHISFL 306
LS LL+LG+LLPDSTTPLNL QHD EP+KVI+RCS LL+N+ HISFL
Sbjct: 444 LSSNLLLELGKLLPDSTTPLNLSQHDLEPVKVIQRCSSLLNNKLLAPGAVLPFGFHISFL 265
Query: 305 HRLDQGCLLGDTFDVNLDVSK*EPLEVHLAPDHIRGIHKCPVLVDHIDDDDETAIVLPVV 126
H LDQ CL GDT DVNLDVS+*+ LEVHLAPDHIR + +CPVLVD +DDDDE A+VL VV
Sbjct: 264 HGLDQSCLFGDTLDVNLDVSQ*KTLEVHLAPDHIRSVDECPVLVDDVDDDDEAAVVLAVV 85
Query: 125 HQGHAPDLHEPLERHPRGG 69
HQGH PDL EPLERH GG
Sbjct: 84 HQGHPPDLDEPLERHLCGG 28
Score = 211 bits (456), Expect = 3e-054
Identities = 97/135 (71%), Positives = 106/135 (78%)
Frame = +2 / +3
Query: 68 RHREDAVQEVRGDRARGPGELREGLWPSRRHRRCGRPEQGTCGCP*YGQVPGELQAALTY 247
R R+DAVQEVR DRA GPGELR+GL P RRHRR RPE GT *Y QVP ELQA+ T
Sbjct: 27 RRRKDAVQEVRRDRAGGPGELRQGLRPPRRHRRRRRPEPGTRRRS*YDQVPDELQASFTD 206
Query: 248 *HQD*HQTCPQEDNPDQGDGGS*CEDQVGEQLMGQEADCPEEESIAQ*L**VQSHAGED* 427
*HQD*HQ PQ+ N DQG GGS*CE+Q+GEQL+GQEA C EE+SIA+*L* VQ H G D*
Sbjct: 207 *HQD*HQAYPQKGNFDQGHGGS*CENQMGEQLLGQEAYCSEEKSIAE*L*QVQGHVG*D* 386
Query: 428 EGWCYQARARQA*EG 472
EGWCYQARA QA EG
Sbjct: 387 EGWCYQARACQAQEG 431
Score = 95.9 bits (203), Expect(2) = 3e-030
Identities = 44/59 (74%), Positives = 48/59 (81%)
Frame = +1 / +2
Query: 310 KLM*RPSGRTAHGARS*LSRRGEHRSMTLIGSKSCWRRLRGVVLSGKSSPSLRRRPQLK 486
KLM*+P+GRTA GARS L RR EHR MTL GS+SCW RLRGVVLSGKS PS RRR L+
Sbjct: 269 KLM*KPNGRTAPGARSLLFRREEHR*MTLTGSRSCWLRLRGVVLSGKSLPSSRRRLLLR 445
Score = 56.1 bits (116), Expect(2) = 3e-030
Identities = 31/50 (62%), Positives = 32/50 (64%)
Frame = +1 / +2
Query: 124 *TTGRTMAVXXXXXMWSTRTGHLWMPLIWSGAR*TSSGSHLLTSRLTSNV 273
*TT RT A STRTGH LI SGAR*TSS H LTSRLTS+V
Sbjct: 83 *TTARTTAASSSSSTSSTRTGHSSTLLI*SGAR*TSSVFH*LTSRLTSSV 232
Score = 40.9 bits (83), Expect(2) = 1e-068
Identities = 17/32 (53%), Positives = 23/32 (71%)
Frame = -1 / -2
Query: 609 DKV*NGFTGNILVTLALTTLNRIADPTHNQKL 514
+K+*N F +++TLAL TL ADPT N+KL
Sbjct: 565 EKI*NSFLKTVVLTLALRTLEHRADPTWNKKL 470
Score = 24.4 bits (47), Expect(2) = 7e-083
Identities = 12/20 (60%), Positives = 15/20 (75%)
Frame = +2 / +3
Query: 515 SFWL*VGSAIRLSVVKARVT 574
SF VGSA+ SV+KARV+
Sbjct: 471 SFLFQVGSALCSSVLKARVS 530
Score = 23.1 bits (44), Expect(2) = 3e-060
Identities = 14/31 (45%), Positives = 19/31 (61%)
Frame = -2 / -3
Query: 605 KFEMGSQGTYW*LWL*QRSIELLIQLITKNS 513
++E+ S +*LWL*+ IQL TKNS
Sbjct: 561 RYEIVS*KQLY*LWL*EHWNIEQIQLGTKNS 469
>gb|BE196257.2|BE196257 HVSMEh0091M19f Hordeum vulgare 5-45 DAP spike EST library
HVcDNA0009 (5 to 45 DAP) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEh0091M19f, mRNA sequence
Length = 899
Score = 303 bits (656), Expect(2) = 7e-083
Identities = 130/139 (93%), Positives = 134/139 (96%)
Frame = +3 / +2
Query: 69 ATARMPFKRFVEIGRVALVNYGKDYGRLVVIVDVVDQNRALVDAPDMVRCQVNFKRLSLT 248
A A+MPFKRFVEIGRVALVNYGKDYGRLVVIVDVVDQNRALVDAPDM+RCQ+NFKRLSLT
Sbjct: 26 AAAKMPFKRFVEIGRVALVNYGKDYGRLVVIVDVVDQNRALVDAPDMIRCQMNFKRLSLT 205
Query: 249 DIKIDIKRVPKKTTLIKAMEEADVKTKWENSSWGKKLIVQKRRASLNDFDRFKVMLAKIK 428
DIKIDIKR+PKK TLIKAMEEADVKTKWENSSWGKKLIVQKRRASLNDFDRFKVMLAKIK
Sbjct: 206 DIKIDIKRIPKKATLIKAMEEADVKTKWENSSWGKKLIVQKRRASLNDFDRFKVMLAKIK 385
Query: 429 RGGAIRQELAKLKKASTA* 485
RGGAIRQELAKLKK A*
Sbjct: 386 RGGAIRQELAKLKKEVAA* 442
Score = 239 bits (517), Expect(2) = 1e-068
Identities = 111/139 (79%), Positives = 115/139 (82%)
Frame = -3 / -3
Query: 484 *AVDAFLSLASSCLIAPPLLIFASMTLNLSKSLSDALLFWTISFLPHELFSHLVFTSASS 305
*A +FLSLASSCLIAPPLLI A+MTLNLSKS SDALLF TISFLP ELFSHLVFTSASS
Sbjct: 441 *AATSFLSLASSCLIAPPLLILANMTLNLSKSFSDALLF*TISFLPQELFSHLVFTSASS 262
Query: 304 IALIRVVFLGTRLMSILMSVSESRLKFTWHLTISGASTSALFWXXXXXXXXXRP*SFP*F 125
+ALI+V FLG RLMSILMSVSE RLKF WHL ISGASTSA FW RP*S P*F
Sbjct: 261 MALIKVAFLGIRLMSILMSVSERRLKFIWHLIISGASTSARFWSTTSTMTTRRP*SLP*F 82
Query: 124 TRATRPISTNLLNGILAVA 68
TRATRPISTNLLNGI A A
Sbjct: 81 TRATRPISTNLLNGIFAAA 25
Score = 229 bits (494), Expect(2) = 3e-060
Identities = 95/139 (68%), Positives = 107/139 (76%)
Frame = -2 / -2
Query: 485 LSCGRLLKLGELLPDSTTPLNLRQHDFEPIKVIERCSPLLDNQXXXXXXXXXXXLHISFL 306
LS LL+LG+LLPDSTTPLNL QHD EP+KVI+RCS LL+N+ HISFL
Sbjct: 442 LSSNLLLELGKLLPDSTTPLNLSQHDLEPVKVIQRCSSLLNNKLLAPGAVLPFGFHISFL 263
Query: 305 HRLDQGCLLGDTFDVNLDVSK*EPLEVHLAPDHIRGIHKCPVLVDHIDDDDETAIVLPVV 126
H LDQ CL GDT DVNLDVS+*+ LEVHLAPDHIR + +CPVLVD +DDDDE A+VL VV
Sbjct: 262 HGLDQSCLFGDTLDVNLDVSQ*KTLEVHLAPDHIRSVDECPVLVDDVDDDDEAAVVLAVV 83
Query: 125 HQGHAPDLHEPLERHPRGG 69
HQGH PDL EPLERH GG
Sbjct: 82 HQGHPPDLDEPLERHLCGG 26
Score = 211 bits (456), Expect = 3e-054
Identities = 97/135 (71%), Positives = 106/135 (78%)
Frame = +2 / +1
Query: 68 RHREDAVQEVRGDRARGPGELREGLWPSRRHRRCGRPEQGTCGCP*YGQVPGELQAALTY 247
R R+DAVQEVR DRA GPGELR+GL P RRHRR RPE GT *Y QVP ELQA+ T
Sbjct: 25 RRRKDAVQEVRRDRAGGPGELRQGLRPPRRHRRRRRPEPGTRRRS*YDQVPDELQASFTD 204
Query: 248 *HQD*HQTCPQEDNPDQGDGGS*CEDQVGEQLMGQEADCPEEESIAQ*L**VQSHAGED* 427
*HQD*HQ PQ+ N DQG GGS*CE+Q+GEQL+GQEA C EE+SIA+*L* VQ H G D*
Sbjct: 205 *HQD*HQAYPQKGNFDQGHGGS*CENQMGEQLLGQEAYCSEEKSIAE*L*QVQGHVG*D* 384
Query: 428 EGWCYQARARQA*EG 472
EGWCYQARA QA EG
Sbjct: 385 EGWCYQARACQAQEG 429
Score = 95.9 bits (203), Expect(2) = 3e-030
Identities = 44/59 (74%), Positives = 48/59 (81%)
Frame = +1 / +3
Query: 310 KLM*RPSGRTAHGARS*LSRRGEHRSMTLIGSKSCWRRLRGVVLSGKSSPSLRRRPQLK 486
KLM*+P+GRTA GARS L RR EHR MTL GS+SCW RLRGVVLSGKS PS RRR L+
Sbjct: 267 KLM*KPNGRTAPGARSLLFRREEHR*MTLTGSRSCWLRLRGVVLSGKSLPSSRRRLLLR 443
Score = 56.1 bits (116), Expect(2) = 3e-030
Identities = 31/50 (62%), Positives = 32/50 (64%)
Frame = +1 / +3
Query: 124 *TTGRTMAVXXXXXMWSTRTGHLWMPLIWSGAR*TSSGSHLLTSRLTSNV 273
*TT RT A STRTGH LI SGAR*TSS H LTSRLTS+V
Sbjct: 81 *TTARTTAASSSSSTSSTRTGHSSTLLI*SGAR*TSSVFH*LTSRLTSSV 230
Score = 40.9 bits (83), Expect(2) = 1e-068
Identities = 17/32 (53%), Positives = 23/32 (71%)
Frame = -1 / -1
Query: 609 DKV*NGFTGNILVTLALTTLNRIADPTHNQKL 514
+K+*N F +++TLAL TL ADPT N+KL
Sbjct: 563 EKI*NSFLKTVVLTLALRTLEHRADPTWNKKL 468
Score = 24.4 bits (47), Expect(2) = 7e-083
Identities = 12/20 (60%), Positives = 15/20 (75%)
Frame = +2 / +1
Query: 515 SFWL*VGSAIRLSVVKARVT 574
SF VGSA+ SV+KARV+
Sbjct: 469 SFLFQVGSALCSSVLKARVS 528
Score = 23.1 bits (44), Expect(2) = 3e-060
Identities = 14/31 (45%), Positives = 19/31 (61%)
Frame = -2 / -2
Query: 605 KFEMGSQGTYW*LWL*QRSIELLIQLITKNS 513
++E+ S +*LWL*+ IQL TKNS
Sbjct: 559 RYEIVS*KQLY*LWL*EHWNIEQIQLGTKNS 467
>gb|BM816732.1|BM816732 HB02C05_T3.ab1 HB Hordeum vulgare subsp. vulgare cDNA clone
HB02C05_T3.ab1 similar to (AC007109) 60S ribosomal
protein L14 [Arabidopsis thaliana], mRNA sequence
Length = 817
Score = 303 bits (656), Expect(2) = 7e-083
Identities = 130/139 (93%), Positives = 134/139 (96%)
Frame = +3 / +3
Query: 69 ATARMPFKRFVEIGRVALVNYGKDYGRLVVIVDVVDQNRALVDAPDMVRCQVNFKRLSLT 248
A A+MPFKRFVEIGRVALVNYGKDYGRLVVIVDVVDQNRALVDAPDM+RCQ+NFKRLSLT
Sbjct: 30 AAAKMPFKRFVEIGRVALVNYGKDYGRLVVIVDVVDQNRALVDAPDMIRCQMNFKRLSLT 209
Query: 249 DIKIDIKRVPKKTTLIKAMEEADVKTKWENSSWGKKLIVQKRRASLNDFDRFKVMLAKIK 428
DIKIDIKR+PKK TLIKAMEEADVKTKWENSSWGKKLIVQKRRASLNDFDRFKVMLAKIK
Sbjct: 210 DIKIDIKRIPKKATLIKAMEEADVKTKWENSSWGKKLIVQKRRASLNDFDRFKVMLAKIK 389
Query: 429 RGGAIRQELAKLKKASTA* 485
RGGAIRQELAKLKK A*
Sbjct: 390 RGGAIRQELAKLKKEVAA* 446
Score = 239 bits (517), Expect(2) = 1e-068
Identities = 111/139 (79%), Positives = 115/139 (82%)
Frame = -3 / -1
Query: 484 *AVDAFLSLASSCLIAPPLLIFASMTLNLSKSLSDALLFWTISFLPHELFSHLVFTSASS 305
*A +FLSLASSCLIAPPLLI A+MTLNLSKS SDALLF TISFLP ELFSHLVFTSASS
Sbjct: 445 *AATSFLSLASSCLIAPPLLILANMTLNLSKSFSDALLF*TISFLPQELFSHLVFTSASS 266
Query: 304 IALIRVVFLGTRLMSILMSVSESRLKFTWHLTISGASTSALFWXXXXXXXXXRP*SFP*F 125
+ALI+V FLG RLMSILMSVSE RLKF WHL ISGASTSA FW RP*S P*F
Sbjct: 265 MALIKVAFLGIRLMSILMSVSERRLKFIWHLIISGASTSARFWSTTSTMTTRRP*SLP*F 86
Query: 124 TRATRPISTNLLNGILAVA 68
TRATRPISTNLLNGI A A
Sbjct: 85 TRATRPISTNLLNGIFAAA 29
Score = 227 bits (490), Expect(2) = 1e-059
Identities = 94/139 (67%), Positives = 106/139 (76%)
Frame = -2 / -3
Query: 485 LSCGRLLKLGELLPDSTTPLNLRQHDFEPIKVIERCSPLLDNQXXXXXXXXXXXLHISFL 306
LS LL+LG+LLPDSTTPLNL QHD EP+KVI+RCS LL+N+ HISFL
Sbjct: 446 LSSNLLLELGKLLPDSTTPLNLSQHDLEPVKVIQRCSSLLNNKLLAPGAVLPFGFHISFL 267
Query: 305 HRLDQGCLLGDTFDVNLDVSK*EPLEVHLAPDHIRGIHKCPVLVDHIDDDDETAIVLPVV 126
H LDQ CL GDT DVNLDV +*+ LEVHLAPDHIR + +CPVLVD +DDDDE A+VL VV
Sbjct: 266 HGLDQSCLFGDTLDVNLDVGQ*KTLEVHLAPDHIRSVDECPVLVDDVDDDDEAAVVLAVV 87
Query: 125 HQGHAPDLHEPLERHPRGG 69
HQGH PDL EPLERH GG
Sbjct: 86 HQGHPPDLDEPLERHLCGG 30
Score = 209 bits (451), Expect = 1e-053
Identities = 96/135 (71%), Positives = 105/135 (77%)
Frame = +2 / +2
Query: 68 RHREDAVQEVRGDRARGPGELREGLWPSRRHRRCGRPEQGTCGCP*YGQVPGELQAALTY 247
R R+DAVQEVR DRA GPGELR+GL P RRHRR RPE GT *Y QVP ELQA+ T
Sbjct: 29 RRRKDAVQEVRRDRAGGPGELRQGLRPPRRHRRRRRPEPGTRRRS*YDQVPDELQASFTD 208
Query: 248 *HQD*HQTCPQEDNPDQGDGGS*CEDQVGEQLMGQEADCPEEESIAQ*L**VQSHAGED* 427
HQD*HQ PQ+ N DQG GGS*CE+Q+GEQL+GQEA C EE+SIA+*L* VQ H G D*
Sbjct: 209 RHQD*HQAYPQKGNFDQGHGGS*CENQMGEQLLGQEAYCSEEKSIAE*L*QVQGHVG*D* 388
Query: 428 EGWCYQARARQA*EG 472
EGWCYQARA QA EG
Sbjct: 389 EGWCYQARACQAQEG 433
Score = 95.9 bits (203), Expect(2) = 2e-029
Identities = 44/59 (74%), Positives = 48/59 (81%)
Frame = +1 / +1
Query: 310 KLM*RPSGRTAHGARS*LSRRGEHRSMTLIGSKSCWRRLRGVVLSGKSSPSLRRRPQLK 486
KLM*+P+GRTA GARS L RR EHR MTL GS+SCW RLRGVVLSGKS PS RRR L+
Sbjct: 271 KLM*KPNGRTAPGARSLLFRREEHR*MTLTGSRSCWLRLRGVVLSGKSLPSSRRRLLLR 447
Score = 52.8 bits (109), Expect(2) = 2e-029
Identities = 30/50 (60%), Positives = 31/50 (62%)
Frame = +1 / +1
Query: 124 *TTGRTMAVXXXXXMWSTRTGHLWMPLIWSGAR*TSSGSHLLTSRLTSNV 273
*TT RT A STRTGH LI SGAR*TSS H TSRLTS+V
Sbjct: 85 *TTARTTAASSSSSTSSTRTGHSSTLLI*SGAR*TSSVFH*PTSRLTSSV 234
Score = 40.9 bits (83), Expect(2) = 1e-068
Identities = 17/32 (53%), Positives = 23/32 (71%)
Frame = -1 / -2
Query: 609 DKV*NGFTGNILVTLALTTLNRIADPTHNQKL 514
+K+*N F +++TLAL TL ADPT N+KL
Sbjct: 567 EKI*NSFLKTVVLTLALRTLEHRADPTWNKKL 472
Score = 24.4 bits (47), Expect(2) = 7e-083
Identities = 12/20 (60%), Positives = 15/20 (75%)
Frame = +2 / +2
Query: 515 SFWL*VGSAIRLSVVKARVT 574
SF VGSA+ SV+KARV+
Sbjct: 473 SFLFQVGSALCSSVLKARVS 532
Score = 23.1 bits (44), Expect(2) = 1e-059
Identities = 14/31 (45%), Positives = 19/31 (61%)
Frame = -2 / -3
Query: 605 KFEMGSQGTYW*LWL*QRSIELLIQLITKNS 513
++E+ S +*LWL*+ IQL TKNS
Sbjct: 563 RYEIVS*KQLY*LWL*EHWNIEQIQLGTKNS 471
>gb|BM377218.2|BM377218 EBem05_SQ004_H13_R embryo, 14 DPA, no treatment, cv Optic, EBem05
Hordeum vulgare subsp. vulgare cDNA clone
EBem05_SQ004_H13 5', mRNA sequence
Length = 628
Score = 303 bits (656), Expect(2) = 7e-083
Identities = 130/142 (91%), Positives = 135/142 (95%)
Frame = +3 / +2
Query: 60 AATATARMPFKRFVEIGRVALVNYGKDYGRLVVIVDVVDQNRALVDAPDMVRCQVNFKRL 239
AA A A+MPFKRFVEIGRVALVNYGKDYGRLVVIVDVVD NRALVDAPDM+RCQ+NFKRL
Sbjct: 38 AAAAAAKMPFKRFVEIGRVALVNYGKDYGRLVVIVDVVDHNRALVDAPDMIRCQMNFKRL 217
Query: 240 SLTDIKIDIKRVPKKTTLIKAMEEADVKTKWENSSWGKKLIVQKRRASLNDFDRFKVMLA 419
SLTDIKIDIKR+PKK TLIKAMEEADVKTKWENSSWGKKLIVQKRRASLNDFDRFKVMLA
Sbjct: 218 SLTDIKIDIKRIPKKATLIKAMEEADVKTKWENSSWGKKLIVQKRRASLNDFDRFKVMLA 397
Query: 420 KIKRGGAIRQELAKLKKASTA* 485
KIKRGGAI+QELAKLKK A*
Sbjct: 398 KIKRGGAIKQELAKLKKEVAA* 463
Score = 240 bits (519), Expect(2) = 5e-069
Identities = 112/142 (78%), Positives = 116/142 (81%)
Frame = -3 / -2
Query: 484 *AVDAFLSLASSCLIAPPLLIFASMTLNLSKSLSDALLFWTISFLPHELFSHLVFTSASS 305
*A +FLSLASSCLIAPPLLI A+MTLNLSKS SDALLF TISFLP ELFSHLVFTSASS
Sbjct: 462 *AATSFLSLASSCLIAPPLLILANMTLNLSKSFSDALLF*TISFLPQELFSHLVFTSASS 283
Query: 304 IALIRVVFLGTRLMSILMSVSESRLKFTWHLTISGASTSALFWXXXXXXXXXRP*SFP*F 125
+ALI+V FLG RLMSILMSVSE RLKF WHL ISGASTSA W RP*S P*F
Sbjct: 282 MALIKVAFLGIRLMSILMSVSERRLKFIWHLIISGASTSARLWSTTSTMTTRRP*SLP*F 103
Query: 124 TRATRPISTNLLNGILAVAVAA 59
TRATRPISTNLLNGI A A AA
Sbjct: 102 TRATRPISTNLLNGIFAAAAAA 37
Score = 227 bits (491), Expect(2) = 8e-060
Identities = 95/146 (65%), Positives = 109/146 (74%)
Frame = -2 / -1
Query: 485 LSCGRLLKLGELLPDSTTPLNLRQHDFEPIKVIERCSPLLDNQXXXXXXXXXXXLHISFL 306
LS LL+LG+LL DSTTPLNL QHD EP+KVI+RCS LL+N+ HISFL
Sbjct: 463 LSSNLLLELGKLLLDSTTPLNLSQHDLEPVKVIQRCSSLLNNKLLAPGAVLPFGFHISFL 284
Query: 305 HRLDQGCLLGDTFDVNLDVSK*EPLEVHLAPDHIRGIHKCPVLVDHIDDDDETAIVLPVV 126
H LDQ CL GDT DVNLDV +*+ LEVHLAPDHIR + +CPV+VD +DDDDE A+VL VV
Sbjct: 283 HGLDQSCLFGDTLDVNLDVGQ*KTLEVHLAPDHIRSVDECPVMVDDVDDDDEAAVVLAVV 104
Query: 125 HQGHAPDLHEPLERHPRGGGGGAVKR 48
HQGH PDL EPLERH GG GG +R
Sbjct: 103 HQGHPPDLDEPLERHLCGGCGGGEER 26
Score = 203 bits (437), Expect = 1e-051
Identities = 94/133 (70%), Positives = 103/133 (77%)
Frame = +2 / +1
Query: 74 REDAVQEVRGDRARGPGELREGLWPSRRHRRCGRPEQGTCGCP*YGQVPGELQAALTY*H 253
R+DAVQEVR DRA GPGELR+GL P RRHRR RP GT *Y QVP ELQA+ T H
Sbjct: 52 RKDAVQEVRRDRAGGPGELRQGLRPPRRHRRRRRP*PGTRRRS*YDQVPDELQASFTDRH 231
Query: 254 QD*HQTCPQEDNPDQGDGGS*CEDQVGEQLMGQEADCPEEESIAQ*L**VQSHAGED*EG 433
QD*HQ PQ+ N DQG GGS*CE+Q+GEQL+GQEA C EE+SIA+*L* VQ H G D*EG
Sbjct: 232 QD*HQAYPQKGNFDQGHGGS*CENQMGEQLLGQEAYCSEEKSIAE*L*QVQGHVG*D*EG 411
Query: 434 WCYQARARQA*EG 472
WCYQARA QA EG
Sbjct: 412 WCYQARACQAQEG 450
Score = 93.2 bits (197), Expect(2) = 2e-027
Identities = 43/59 (72%), Positives = 47/59 (79%)
Frame = +1 / +3
Query: 310 KLM*RPSGRTAHGARS*LSRRGEHRSMTLIGSKSCWRRLRGVVLSGKSSPSLRRRPQLK 486
KLM*+P+GRTA GARS L RR EHR MTL GS+SCW RLRGVVLS KS PS RRR L+
Sbjct: 288 KLM*KPNGRTAPGARSLLFRREEHR*MTLTGSRSCWLRLRGVVLSSKSLPSSRRRLLLR 464
Score = 49.2 bits (101), Expect(2) = 2e-027
Identities = 29/50 (58%), Positives = 30/50 (60%)
Frame = +1 / +3
Query: 124 *TTGRTMAVXXXXXMWSTRTGHLWMPLIWSGAR*TSSGSHLLTSRLTSNV 273
*TT RT A ST TGH LI SGAR*TSS H TSRLTS+V
Sbjct: 102 *TTARTTAASSSSSTSSTITGHSSTLLI*SGAR*TSSVFH*PTSRLTSSV 251
Score = 40.9 bits (83), Expect(2) = 5e-069
Identities = 17/32 (53%), Positives = 23/32 (71%)
Frame = -1 / -3
Query: 609 DKV*NGFTGNILVTLALTTLNRIADPTHNQKL 514
+K+*N F +++TLAL TL ADPT N+KL
Sbjct: 584 EKI*NSFLKTVVLTLALRTLEHRADPTWNKKL 489
Score = 24.4 bits (47), Expect(2) = 7e-083
Identities = 12/20 (60%), Positives = 15/20 (75%)
Frame = +2 / +1
Query: 515 SFWL*VGSAIRLSVVKARVT 574
SF VGSA+ SV+KARV+
Sbjct: 490 SFLFQVGSALCSSVLKARVS 549
Score = 23.1 bits (44), Expect(2) = 8e-060
Identities = 14/31 (45%), Positives = 19/31 (61%)
Frame = -2 / -1
Query: 605 KFEMGSQGTYW*LWL*QRSIELLIQLITKNS 513
++E+ S +*LWL*+ IQL TKNS
Sbjct: 580 RYEIVS*KQLY*LWL*EHWNIEQIQLGTKNS 488
>gb|BJ465123.1|BJ465123 BJ465123 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags37p10 5', mRNA sequence
Length = 603
Score = 303 bits (656), Expect(2) = 7e-083
Identities = 130/139 (93%), Positives = 134/139 (96%)
Frame = +3 / +3
Query: 69 ATARMPFKRFVEIGRVALVNYGKDYGRLVVIVDVVDQNRALVDAPDMVRCQVNFKRLSLT 248
A A+MPFKRFVEIGRVALVNYGKDYGRLVVIVDVVDQNRALVDAPDM+RCQ+NFKRLSLT
Sbjct: 21 AAAKMPFKRFVEIGRVALVNYGKDYGRLVVIVDVVDQNRALVDAPDMIRCQMNFKRLSLT 200
Query: 249 DIKIDIKRVPKKTTLIKAMEEADVKTKWENSSWGKKLIVQKRRASLNDFDRFKVMLAKIK 428
DIKIDIKR+PKK TLIKAMEEADVKTKWENSSWGKKLIVQKRRASLNDFDRFKVMLAKIK
Sbjct: 201 DIKIDIKRIPKKATLIKAMEEADVKTKWENSSWGKKLIVQKRRASLNDFDRFKVMLAKIK 380
Query: 429 RGGAIRQELAKLKKASTA* 485
RGGAIRQELAKLKK A*
Sbjct: 381 RGGAIRQELAKLKKEVAA* 437
Score = 239 bits (517), Expect(2) = 1e-068
Identities = 111/139 (79%), Positives = 115/139 (82%)
Frame = -3 / -3
Query: 484 *AVDAFLSLASSCLIAPPLLIFASMTLNLSKSLSDALLFWTISFLPHELFSHLVFTSASS 305
*A +FLSLASSCLIAPPLLI A+MTLNLSKS SDALLF TISFLP ELFSHLVFTSASS
Sbjct: 436 *AATSFLSLASSCLIAPPLLILANMTLNLSKSFSDALLF*TISFLPQELFSHLVFTSASS 257
Query: 304 IALIRVVFLGTRLMSILMSVSESRLKFTWHLTISGASTSALFWXXXXXXXXXRP*SFP*F 125
+ALI+V FLG RLMSILMSVSE RLKF WHL ISGASTSA FW RP*S P*F
Sbjct: 256 MALIKVAFLGIRLMSILMSVSERRLKFIWHLIISGASTSARFWSTTSTMTTRRP*SLP*F 77
Query: 124 TRATRPISTNLLNGILAVA 68
TRATRPISTNLLNGI A A
Sbjct: 76 TRATRPISTNLLNGIFAAA 20
Score = 229 bits (494), Expect(2) = 3e-060
Identities = 95/139 (68%), Positives = 107/139 (76%)
Frame = -2 / -2
Query: 485 LSCGRLLKLGELLPDSTTPLNLRQHDFEPIKVIERCSPLLDNQXXXXXXXXXXXLHISFL 306
LS LL+LG+LLPDSTTPLNL QHD EP+KVI+RCS LL+N+ HISFL
Sbjct: 437 LSSNLLLELGKLLPDSTTPLNLSQHDLEPVKVIQRCSSLLNNKLLAPGAVLPFGFHISFL 258
Query: 305 HRLDQGCLLGDTFDVNLDVSK*EPLEVHLAPDHIRGIHKCPVLVDHIDDDDETAIVLPVV 126
H LDQ CL GDT DVNLDVS+*+ LEVHLAPDHIR + +CPVLVD +DDDDE A+VL VV
Sbjct: 257 HGLDQSCLFGDTLDVNLDVSQ*KTLEVHLAPDHIRSVDECPVLVDDVDDDDEAAVVLAVV 78
Query: 125 HQGHAPDLHEPLERHPRGG 69
HQGH PDL EPLERH GG
Sbjct: 77 HQGHPPDLDEPLERHLCGG 21
Score = 211 bits (456), Expect = 3e-054
Identities = 97/135 (71%), Positives = 106/135 (78%)
Frame = +2 / +2
Query: 68 RHREDAVQEVRGDRARGPGELREGLWPSRRHRRCGRPEQGTCGCP*YGQVPGELQAALTY 247
R R+DAVQEVR DRA GPGELR+GL P RRHRR RPE GT *Y QVP ELQA+ T
Sbjct: 20 RRRKDAVQEVRRDRAGGPGELRQGLRPPRRHRRRRRPEPGTRRRS*YDQVPDELQASFTD 199
Query: 248 *HQD*HQTCPQEDNPDQGDGGS*CEDQVGEQLMGQEADCPEEESIAQ*L**VQSHAGED* 427
*HQD*HQ PQ+ N DQG GGS*CE+Q+GEQL+GQEA C EE+SIA+*L* VQ H G D*
Sbjct: 200 *HQD*HQAYPQKGNFDQGHGGS*CENQMGEQLLGQEAYCSEEKSIAE*L*QVQGHVG*D* 379
Query: 428 EGWCYQARARQA*EG 472
EGWCYQARA QA EG
Sbjct: 380 EGWCYQARACQAQEG 424
Score = 95.9 bits (203), Expect(2) = 3e-030
Identities = 44/59 (74%), Positives = 48/59 (81%)
Frame = +1 / +1
Query: 310 KLM*RPSGRTAHGARS*LSRRGEHRSMTLIGSKSCWRRLRGVVLSGKSSPSLRRRPQLK 486
KLM*+P+GRTA GARS L RR EHR MTL GS+SCW RLRGVVLSGKS PS RRR L+
Sbjct: 262 KLM*KPNGRTAPGARSLLFRREEHR*MTLTGSRSCWLRLRGVVLSGKSLPSSRRRLLLR 438
Score = 56.1 bits (116), Expect(2) = 3e-030
Identities = 31/50 (62%), Positives = 32/50 (64%)
Frame = +1 / +1
Query: 124 *TTGRTMAVXXXXXMWSTRTGHLWMPLIWSGAR*TSSGSHLLTSRLTSNV 273
*TT RT A STRTGH LI SGAR*TSS H LTSRLTS+V
Sbjct: 76 *TTARTTAASSSSSTSSTRTGHSSTLLI*SGAR*TSSVFH*LTSRLTSSV 225
Score = 40.9 bits (83), Expect(2) = 1e-068
Identities = 17/32 (53%), Positives = 23/32 (71%)
Frame = -1 / -1
Query: 609 DKV*NGFTGNILVTLALTTLNRIADPTHNQKL 514
+K+*N F +++TLAL TL ADPT N+KL
Sbjct: 558 EKI*NSFLKTVVLTLALRTLEHRADPTWNKKL 463
Score = 24.4 bits (47), Expect(2) = 7e-083
Identities = 12/20 (60%), Positives = 15/20 (75%)
Frame = +2 / +2
Query: 515 SFWL*VGSAIRLSVVKARVT 574
SF VGSA+ SV+KARV+
Sbjct: 464 SFLFQVGSALCSSVLKARVS 523
Score = 23.1 bits (44), Expect(2) = 3e-060
Identities = 14/31 (45%), Positives = 19/31 (61%)
Frame = -2 / -2
Query: 605 KFEMGSQGTYW*LWL*QRSIELLIQLITKNS 513
++E+ S +*LWL*+ IQL TKNS
Sbjct: 554 RYEIVS*KQLY*LWL*EHWNIEQIQLGTKNS 462
>gb|BU972772.1|BU972772 HB22K20r BC Hordeum vulgare subsp. vulgare cDNA clone HB22K20
5-PRIME, mRNA sequence
Length = 590
Score = 305 bits (660), Expect(2) = 7e-083
Identities = 131/142 (92%), Positives = 135/142 (95%)
Frame = +3 / +2
Query: 60 AATATARMPFKRFVEIGRVALVNYGKDYGRLVVIVDVVDQNRALVDAPDMVRCQVNFKRL 239
A A A+MPFKRFVEIGRVALVNYGKDYGRLVVIVDVVDQNRALVDAPDM+RCQ+NFKRL
Sbjct: 44 AVAAAAKMPFKRFVEIGRVALVNYGKDYGRLVVIVDVVDQNRALVDAPDMIRCQMNFKRL 223
Query: 240 SLTDIKIDIKRVPKKTTLIKAMEEADVKTKWENSSWGKKLIVQKRRASLNDFDRFKVMLA 419
SLTDIKIDIKR+PKK TLIKAMEEADVKTKWENSSWGKKLIVQKRRASLNDFDRFKVMLA
Sbjct: 224 SLTDIKIDIKRIPKKATLIKAMEEADVKTKWENSSWGKKLIVQKRRASLNDFDRFKVMLA 403
Query: 420 KIKRGGAIRQELAKLKKASTA* 485
KIKRGGAIRQELAKLKK A*
Sbjct: 404 KIKRGGAIRQELAKLKKEVAA* 469
Score = 241 bits (521), Expect(2) = 2e-068
Identities = 112/142 (78%), Positives = 116/142 (81%)
Frame = -3 / -3
Query: 484 *AVDAFLSLASSCLIAPPLLIFASMTLNLSKSLSDALLFWTISFLPHELFSHLVFTSASS 305
*A +FLSLASSCLIAPPLLI A+MTLNLSKS SDALLF TISFLP ELFSHLVFTSASS
Sbjct: 468 *AATSFLSLASSCLIAPPLLILANMTLNLSKSFSDALLF*TISFLPQELFSHLVFTSASS 289
Query: 304 IALIRVVFLGTRLMSILMSVSESRLKFTWHLTISGASTSALFWXXXXXXXXXRP*SFP*F 125
+ALI+V FLG RLMSILMSVSE RLKF WHL ISGASTSA FW RP*S P*F
Sbjct: 288 MALIKVAFLGIRLMSILMSVSERRLKFIWHLIISGASTSARFWSTTSTMTTRRP*SLP*F 109
Query: 124 TRATRPISTNLLNGILAVAVAA 59
TRATRPISTNLLNGI A A A
Sbjct: 108 TRATRPISTNLLNGIFAAAATA 43
Score = 226 bits (488), Expect = 1e-058
Identities = 95/146 (65%), Positives = 108/146 (73%)
Frame = -2 / -2
Query: 485 LSCGRLLKLGELLPDSTTPLNLRQHDFEPIKVIERCSPLLDNQXXXXXXXXXXXLHISFL 306
LS LL+LG+LL DSTTPLNL QHD EP+KVI+RCS LL+N+ HISFL
Sbjct: 469 LSSNLLLELGKLLSDSTTPLNLSQHDLEPVKVIQRCSSLLNNKLLAPGAVLPFGFHISFL 290
Query: 305 HRLDQGCLLGDTFDVNLDVSK*EPLEVHLAPDHIRGIHKCPVLVDHIDDDDETAIVLPVV 126
H LDQ CL GDT DVNLDV +*+ LEVHLAPDHIR + +CPVLVD +DDDDE A+VL VV
Sbjct: 289 HGLDQSCLFGDTLDVNLDVGQ*KTLEVHLAPDHIRSVDECPVLVDDVDDDDEAAVVLAVV 110
Query: 125 HQGHAPDLHEPLERHPRGGGGGAVKR 48
HQGH PDL EPLERH GG G +R
Sbjct: 109 HQGHPPDLDEPLERHLCGGCDGGEER 32
Score = 205 bits (442), Expect = 3e-052
Identities = 94/133 (70%), Positives = 103/133 (77%)
Frame = +2 / +1
Query: 74 REDAVQEVRGDRARGPGELREGLWPSRRHRRCGRPEQGTCGCP*YGQVPGELQAALTY*H 253
R+DAVQEVR DRA GPGELR+GL P RRHRR RPE GT *Y QVP ELQA+ T H
Sbjct: 58 RKDAVQEVRRDRAGGPGELRQGLRPPRRHRRRRRPEPGTRRRS*YDQVPDELQASFTDRH 237
Query: 254 QD*HQTCPQEDNPDQGDGGS*CEDQVGEQLMGQEADCPEEESIAQ*L**VQSHAGED*EG 433
QD*HQ PQ+ N DQG GGS*CE+Q+GEQL+GQEA C EE+SIA+*L* VQ H G D*EG
Sbjct: 238 QD*HQAYPQKGNFDQGHGGS*CENQMGEQLLGQEAYCSEEKSIAE*L*QVQGHVG*D*EG 417
Query: 434 WCYQARARQA*EG 472
WCYQ RA QA EG
Sbjct: 418 WCYQTRACQAQEG 456
Score = 92.7 bits (196), Expect(2) = 2e-028
Identities = 43/59 (72%), Positives = 47/59 (79%)
Frame = +1 / +3
Query: 310 KLM*RPSGRTAHGARS*LSRRGEHRSMTLIGSKSCWRRLRGVVLSGKSSPSLRRRPQLK 486
KLM*+P+GRTA GARS L RR EHR MTL GS+SCW RLRGVVLS KS PS RRR L+
Sbjct: 294 KLM*KPNGRTAPGARSLLFRREEHR*MTLTGSRSCWLRLRGVVLSDKSLPSSRRRLLLR 470
Score = 52.8 bits (109), Expect(2) = 2e-028
Identities = 30/50 (60%), Positives = 31/50 (62%)
Frame = +1 / +3
Query: 124 *TTGRTMAVXXXXXMWSTRTGHLWMPLIWSGAR*TSSGSHLLTSRLTSNV 273
*TT RT A STRTGH LI SGAR*TSS H TSRLTS+V
Sbjct: 108 *TTARTTAASSSSSTSSTRTGHSSTLLI*SGAR*TSSVFH*PTSRLTSSV 257
Score = 38.2 bits (77), Expect(2) = 2e-068
Identities = 16/32 (50%), Positives = 22/32 (68%)
Frame = -1 / -1
Query: 609 DKV*NGFTGNILVTLALTTLNRIADPTHNQKL 514
+K+*N F +++TLAL TL ADPT N+ L
Sbjct: 590 EKI*NSFLKTVVLTLALRTLEHRADPTWNKXL 495
Score = 22.6 bits (43), Expect(2) = 7e-083
Identities = 10/15 (66%), Positives = 13/15 (86%)
Frame = +2 / +1
Query: 530 VGSAIRLSVVKARVT 574
VGSA+ SV+KARV+
Sbjct: 511 VGSALCSSVLKARVS 555
>gb|AV913899.1|AV913899 AV913899 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags23k24 5', mRNA sequence
Length = 576
Score = 303 bits (656), Expect(2) = 7e-083
Identities = 130/139 (93%), Positives = 134/139 (96%)
Frame = +3 / +3
Query: 69 ATARMPFKRFVEIGRVALVNYGKDYGRLVVIVDVVDQNRALVDAPDMVRCQVNFKRLSLT 248
A A+MPFKRFVEIGRVALVNYGKDYGRLVVIVDVVDQNRALVDAPDM+RCQ+NFKRLSLT
Sbjct: 39 AAAKMPFKRFVEIGRVALVNYGKDYGRLVVIVDVVDQNRALVDAPDMIRCQMNFKRLSLT 218
Query: 249 DIKIDIKRVPKKTTLIKAMEEADVKTKWENSSWGKKLIVQKRRASLNDFDRFKVMLAKIK 428
DIKIDIKR+PKK TLIKAMEEADVKTKWENSSWGKKLIVQKRRASLNDFDRFKVMLAKIK
Sbjct: 219 DIKIDIKRIPKKATLIKAMEEADVKTKWENSSWGKKLIVQKRRASLNDFDRFKVMLAKIK 398
Query: 429 RGGAIRQELAKLKKASTA* 485
RGGAIRQELAKLKK A*
Sbjct: 399 RGGAIRQELAKLKKEVAA* 455
Score = 239 bits (517), Expect(2) = 2e-068
Identities = 111/139 (79%), Positives = 115/139 (82%)
Frame = -3 / -3
Query: 484 *AVDAFLSLASSCLIAPPLLIFASMTLNLSKSLSDALLFWTISFLPHELFSHLVFTSASS 305
*A +FLSLASSCLIAPPLLI A+MTLNLSKS SDALLF TISFLP ELFSHLVFTSASS
Sbjct: 454 *AATSFLSLASSCLIAPPLLILANMTLNLSKSFSDALLF*TISFLPQELFSHLVFTSASS 275
Query: 304 IALIRVVFLGTRLMSILMSVSESRLKFTWHLTISGASTSALFWXXXXXXXXXRP*SFP*F 125
+ALI+V FLG RLMSILMSVSE RLKF WHL ISGASTSA FW RP*S P*F
Sbjct: 274 MALIKVAFLGIRLMSILMSVSERRLKFIWHLIISGASTSARFWSTTSTMTTRRP*SLP*F 95
Query: 124 TRATRPISTNLLNGILAVA 68
TRATRPISTNLLNGI A A
Sbjct: 94 TRATRPISTNLLNGIFAAA 38
Score = 229 bits (494), Expect(2) = 3e-060
Identities = 95/139 (68%), Positives = 107/139 (76%)
Frame = -2 / -2
Query: 485 LSCGRLLKLGELLPDSTTPLNLRQHDFEPIKVIERCSPLLDNQXXXXXXXXXXXLHISFL 306
LS LL+LG+LLPDSTTPLNL QHD EP+KVI+RCS LL+N+ HISFL
Sbjct: 455 LSSNLLLELGKLLPDSTTPLNLSQHDLEPVKVIQRCSSLLNNKLLAPGAVLPFGFHISFL 276
Query: 305 HRLDQGCLLGDTFDVNLDVSK*EPLEVHLAPDHIRGIHKCPVLVDHIDDDDETAIVLPVV 126
H LDQ CL GDT DVNLDVS+*+ LEVHLAPDHIR + +CPVLVD +DDDDE A+VL VV
Sbjct: 275 HGLDQSCLFGDTLDVNLDVSQ*KTLEVHLAPDHIRSVDECPVLVDDVDDDDEAAVVLAVV 96
Query: 125 HQGHAPDLHEPLERHPRGG 69
HQGH PDL EPLERH GG
Sbjct: 95 HQGHPPDLDEPLERHLCGG 39
Score = 211 bits (456), Expect = 3e-054
Identities = 97/135 (71%), Positives = 106/135 (78%)
Frame = +2 / +2
Query: 68 RHREDAVQEVRGDRARGPGELREGLWPSRRHRRCGRPEQGTCGCP*YGQVPGELQAALTY 247
R R+DAVQEVR DRA GPGELR+GL P RRHRR RPE GT *Y QVP ELQA+ T
Sbjct: 38 RRRKDAVQEVRRDRAGGPGELRQGLRPPRRHRRRRRPEPGTRRRS*YDQVPDELQASFTD 217
Query: 248 *HQD*HQTCPQEDNPDQGDGGS*CEDQVGEQLMGQEADCPEEESIAQ*L**VQSHAGED* 427
*HQD*HQ PQ+ N DQG GGS*CE+Q+GEQL+GQEA C EE+SIA+*L* VQ H G D*
Sbjct: 218 *HQD*HQAYPQKGNFDQGHGGS*CENQMGEQLLGQEAYCSEEKSIAE*L*QVQGHVG*D* 397
Query: 428 EGWCYQARARQA*EG 472
EGWCYQARA QA EG
Sbjct: 398 EGWCYQARACQAQEG 442
Score = 95.9 bits (203), Expect(2) = 3e-030
Identities = 44/59 (74%), Positives = 48/59 (81%)
Frame = +1 / +1
Query: 310 KLM*RPSGRTAHGARS*LSRRGEHRSMTLIGSKSCWRRLRGVVLSGKSSPSLRRRPQLK 486
KLM*+P+GRTA GARS L RR EHR MTL GS+SCW RLRGVVLSGKS PS RRR L+
Sbjct: 280 KLM*KPNGRTAPGARSLLFRREEHR*MTLTGSRSCWLRLRGVVLSGKSLPSSRRRLLLR 456
Score = 56.1 bits (116), Expect(2) = 3e-030
Identities = 31/50 (62%), Positives = 32/50 (64%)
Frame = +1 / +1
Query: 124 *TTGRTMAVXXXXXMWSTRTGHLWMPLIWSGAR*TSSGSHLLTSRLTSNV 273
*TT RT A STRTGH LI SGAR*TSS H LTSRLTS+V
Sbjct: 94 *TTARTTAASSSSSTSSTRTGHSSTLLI*SGAR*TSSVFH*LTSRLTSSV 243
Score = 40.0 bits (81), Expect(2) = 2e-068
Identities = 17/31 (54%), Positives = 22/31 (70%)
Frame = -1 / -3
Query: 606 KV*NGFTGNILVTLALTTLNRIADPTHNQKL 514
K+*N F +++TLAL TL ADPT N+KL
Sbjct: 574 KI*NSFLKTVVLTLALRTLEHRADPTWNKKL 482
Score = 24.4 bits (47), Expect(2) = 7e-083
Identities = 12/20 (60%), Positives = 15/20 (75%)
Frame = +2 / +3
Query: 515 SFWL*VGSAIRLSVVKARVT 574
SF VGSA+ SV+KARV+
Sbjct: 483 SFLFQVGSALCSSVLKARVS 542
Score = 23.1 bits (44), Expect(2) = 3e-060
Identities = 14/31 (45%), Positives = 19/31 (61%)
Frame = -2 / -1
Query: 605 KFEMGSQGTYW*LWL*QRSIELLIQLITKNS 513
++E+ S +*LWL*+ IQL TKNS
Sbjct: 573 RYEIVS*KQLY*LWL*EHWNIEQIQLGTKNS 481
>gb|BQ758693.1|BQ758693 EBma07_SQ002_E13_R maternal, 21 DPA, no treatment, cv Optic, EBma07
Hordeum vulgare subsp. vulgare cDNA clone
EBma07_SQ002_E13 5', mRNA sequence
Length = 576
Score = 306 bits (663), Expect = 9e-083
Identities = 131/141 (92%), Positives = 135/141 (95%)
Frame = +3 / +3
Query: 60 AATATARMPFKRFVEIGRVALVNYGKDYGRLVVIVDVVDQNRALVDAPDMVRCQVNFKRL 239
AA A A+MPFKRFVEIGRVALVNYGKDYGRLVVIVDVVDQNRALVDAPDM+RCQ+NFKRL
Sbjct: 27 AAAAAAKMPFKRFVEIGRVALVNYGKDYGRLVVIVDVVDQNRALVDAPDMIRCQMNFKRL 206
Query: 240 SLTDIKIDIKRVPKKTTLIKAMEEADVKTKWENSSWGKKLIVQKRRASLNDFDRFKVMLA 419
SLTDIKIDIKR+PKK TLIKAMEEADVKTKWENSSWGKKLIVQKRRASLNDFDRFKVMLA
Sbjct: 207 SLTDIKIDIKRIPKKATLIKAMEEADVKTKWENSSWGKKLIVQKRRASLNDFDRFKVMLA 386
Query: 420 KIKRGGAIRQELAKLKKASTA 482
KIKRGGAIRQELAKLKK A
Sbjct: 387 KIKRGGAIRQELAKLKKEVAA 449
Score = 243 bits (525), Expect(2) = 2e-064
Identities = 113/142 (79%), Positives = 117/142 (82%)
Frame = -3 / -3
Query: 484 *AVDAFLSLASSCLIAPPLLIFASMTLNLSKSLSDALLFWTISFLPHELFSHLVFTSASS 305
*A +FLSLASSCLIAPPLLI A+MTLNLSKS SDALLF TISFLP ELFSHLVFTSASS
Sbjct: 451 *AATSFLSLASSCLIAPPLLILANMTLNLSKSFSDALLF*TISFLPQELFSHLVFTSASS 272
Query: 304 IALIRVVFLGTRLMSILMSVSESRLKFTWHLTISGASTSALFWXXXXXXXXXRP*SFP*F 125
+ALI+V FLG RLMSILMSVSE RLKF WHL ISGASTSA FW RP*S P*F
Sbjct: 271 MALIKVAFLGIRLMSILMSVSERRLKFIWHLIISGASTSARFWSTTSTMTTRRP*SLP*F 92
Query: 124 TRATRPISTNLLNGILAVAVAA 59
TRATRPISTNLLNGI A A AA
Sbjct: 91 TRATRPISTNLLNGIFAAAAAA 26
Score = 232 bits (500), Expect = 3e-060
Identities = 96/146 (65%), Positives = 110/146 (75%)
Frame = -2 / -2
Query: 485 LSCGRLLKLGELLPDSTTPLNLRQHDFEPIKVIERCSPLLDNQXXXXXXXXXXXLHISFL 306
+S LL+LG+LLPDSTTPLNL QHD EP+KVI+RCS LL+N+ HISFL
Sbjct: 452 VSSNLLLELGKLLPDSTTPLNLSQHDLEPVKVIQRCSSLLNNKLLAPGAVLPFGFHISFL 273
Query: 305 HRLDQGCLLGDTFDVNLDVSK*EPLEVHLAPDHIRGIHKCPVLVDHIDDDDETAIVLPVV 126
H LDQ CL GDT DVNLDV +*+ LEVHLAPDHIR + +CPVLVD +DDDDE A+VL VV
Sbjct: 272 HGLDQSCLFGDTLDVNLDVGQ*KTLEVHLAPDHIRSVDECPVLVDDVDDDDEAAVVLAVV 93
Query: 125 HQGHAPDLHEPLERHPRGGGGGAVKR 48
HQGH PDL EPLERH GG GG +R
Sbjct: 92 HQGHPPDLDEPLERHLCGGCGGGEER 15
Score = 207 bits (446), Expect = 7e-053
Identities = 95/133 (71%), Positives = 104/133 (78%)
Frame = +2 / +2
Query: 74 REDAVQEVRGDRARGPGELREGLWPSRRHRRCGRPEQGTCGCP*YGQVPGELQAALTY*H 253
R+DAVQEVR DRA GPGELR+GL P RRHRR RPE GT *Y QVP ELQA+ T H
Sbjct: 41 RKDAVQEVRRDRAGGPGELRQGLRPPRRHRRRRRPEPGTRRRS*YDQVPDELQASFTDRH 220
Query: 254 QD*HQTCPQEDNPDQGDGGS*CEDQVGEQLMGQEADCPEEESIAQ*L**VQSHAGED*EG 433
QD*HQ PQ+ N DQG GGS*CE+Q+GEQL+GQEA C EE+SIA+*L* VQ H G D*EG
Sbjct: 221 QD*HQAYPQKGNFDQGHGGS*CENQMGEQLLGQEAYCSEEKSIAE*L*QVQGHVG*D*EG 400
Query: 434 WCYQARARQA*EG 472
WCYQARA QA EG
Sbjct: 401 WCYQARACQAQEG 439
Score = 95.5 bits (202), Expect(2) = 3e-029
Identities = 43/55 (78%), Positives = 46/55 (83%)
Frame = +1 / +1
Query: 310 KLM*RPSGRTAHGARS*LSRRGEHRSMTLIGSKSCWRRLRGVVLSGKSSPSLRRR 474
KLM*+P+GRTA GARS L RR EHR MTL GS+SCW RLRGVVLSGKS PS RRR
Sbjct: 277 KLM*KPNGRTAPGARSLLFRREEHR*MTLTGSRSCWLRLRGVVLSGKSLPSSRRR 441
Score = 52.8 bits (109), Expect(2) = 3e-029
Identities = 30/50 (60%), Positives = 31/50 (62%)
Frame = +1 / +1
Query: 124 *TTGRTMAVXXXXXMWSTRTGHLWMPLIWSGAR*TSSGSHLLTSRLTSNV 273
*TT RT A STRTGH LI SGAR*TSS H TSRLTS+V
Sbjct: 91 *TTARTTAASSSSSTSSTRTGHSSTLLI*SGAR*TSSVFH*PTSRLTSSV 240
Score = 23.1 bits (44), Expect(2) = 2e-064
Identities = 14/31 (45%), Positives = 19/31 (61%)
Frame = -2 / -2
Query: 605 KFEMGSQGTYW*LWL*QRSIELLIQLITKNS 513
++E+ S +*LWL*+ IQL TKNS
Sbjct: 569 RYEIVS*KQLY*LWL*EHWNIEQIQLGTKNS 477
>gb|BU994577.1|BU994577 HM07I06r HM Hordeum vulgare subsp. vulgare cDNA clone HM07I06
5-PRIME, mRNA sequence
Length = 614
Score = 305 bits (660), Expect = 2e-082
Identities = 131/142 (92%), Positives = 135/142 (95%)
Frame = +3 / +1
Query: 60 AATATARMPFKRFVEIGRVALVNYGKDYGRLVVIVDVVDQNRALVDAPDMVRCQVNFKRL 239
A A A+MPFKRFVEIGRVALVNYGKDYGRLVVIVDVVDQNRALVDAPDM+RCQ+NFKRL
Sbjct: 37 AVAAAAKMPFKRFVEIGRVALVNYGKDYGRLVVIVDVVDQNRALVDAPDMIRCQMNFKRL 216
Query: 240 SLTDIKIDIKRVPKKTTLIKAMEEADVKTKWENSSWGKKLIVQKRRASLNDFDRFKVMLA 419
SLTDIKIDIKR+PKK TLIKAMEEADVKTKWENSSWGKKLIVQKRRASLNDFDRFKVMLA
Sbjct: 217 SLTDIKIDIKRIPKKATLIKAMEEADVKTKWENSSWGKKLIVQKRRASLNDFDRFKVMLA 396
Query: 420 KIKRGGAIRQELAKLKKASTA* 485
KIKRGGAIRQELAKLKK A*
Sbjct: 397 KIKRGGAIRQELAKLKKEVAA* 462
Score = 241 bits (521), Expect = 3e-063
Identities = 112/142 (78%), Positives = 116/142 (81%)
Frame = -3 / -1
Query: 484 *AVDAFLSLASSCLIAPPLLIFASMTLNLSKSLSDALLFWTISFLPHELFSHLVFTSASS 305
*A +FLSLASSCLIAPPLLI A+MTLNLSKS SDALLF TISFLP ELFSHLVFTSASS
Sbjct: 461 *AATSFLSLASSCLIAPPLLILANMTLNLSKSFSDALLF*TISFLPQELFSHLVFTSASS 282
Query: 304 IALIRVVFLGTRLMSILMSVSESRLKFTWHLTISGASTSALFWXXXXXXXXXRP*SFP*F 125
+ALI+V FLG RLMSILMSVSE RLKF WHL ISGASTSA FW RP*S P*F
Sbjct: 281 MALIKVAFLGIRLMSILMSVSERRLKFIWHLIISGASTSARFWSTTSTMTTRRP*SLP*F 102
Query: 124 TRATRPISTNLLNGILAVAVAA 59
TRATRPISTNLLNGI A A A
Sbjct: 101 TRATRPISTNLLNGIFAAAATA 36
Score = 226 bits (488), Expect = 1e-058
Identities = 95/146 (65%), Positives = 108/146 (73%)
Frame = -2 / -3
Query: 485 LSCGRLLKLGELLPDSTTPLNLRQHDFEPIKVIERCSPLLDNQXXXXXXXXXXXLHISFL 306
LS LL+LG+LL DSTTPLNL QHD EP+KVI+RCS LL+N+ HISFL
Sbjct: 462 LSSNLLLELGKLLSDSTTPLNLSQHDLEPVKVIQRCSSLLNNKLLAPGAVLPFGFHISFL 283
Query: 305 HRLDQGCLLGDTFDVNLDVSK*EPLEVHLAPDHIRGIHKCPVLVDHIDDDDETAIVLPVV 126
H LDQ CL GDT DVNLDV +*+ LEVHLAPDHIR + +CPVLVD +DDDDE A+VL VV
Sbjct: 282 HGLDQSCLFGDTLDVNLDVGQ*KTLEVHLAPDHIRSVDECPVLVDDVDDDDEAAVVLAVV 103
Query: 125 HQGHAPDLHEPLERHPRGGGGGAVKR 48
HQGH PDL EPLERH GG G +R
Sbjct: 102 HQGHPPDLDEPLERHLCGGCDGGEER 25
Score = 205 bits (442), Expect = 3e-052
Identities = 94/133 (70%), Positives = 103/133 (77%)
Frame = +2 / +3
Query: 74 REDAVQEVRGDRARGPGELREGLWPSRRHRRCGRPEQGTCGCP*YGQVPGELQAALTY*H 253
R+DAVQEVR DRA GPGELR+GL P RRHRR RPE GT *Y QVP ELQA+ T H
Sbjct: 51 RKDAVQEVRRDRAGGPGELRQGLRPPRRHRRRRRPEPGTRRRS*YDQVPDELQASFTDRH 230
Query: 254 QD*HQTCPQEDNPDQGDGGS*CEDQVGEQLMGQEADCPEEESIAQ*L**VQSHAGED*EG 433
QD*HQ PQ+ N DQG GGS*CE+Q+GEQL+GQEA C EE+SIA+*L* VQ H G D*EG
Sbjct: 231 QD*HQAYPQKGNFDQGHGGS*CENQMGEQLLGQEAYCSEEKSIAE*L*QVQGHVG*D*EG 410
Query: 434 WCYQARARQA*EG 472
WCYQ RA QA EG
Sbjct: 411 WCYQTRACQAQEG 449
Score = 92.7 bits (196), Expect(2) = 2e-028
Identities = 43/59 (72%), Positives = 47/59 (79%)
Frame = +1 / +2
Query: 310 KLM*RPSGRTAHGARS*LSRRGEHRSMTLIGSKSCWRRLRGVVLSGKSSPSLRRRPQLK 486
KLM*+P+GRTA GARS L RR EHR MTL GS+SCW RLRGVVLS KS PS RRR L+
Sbjct: 287 KLM*KPNGRTAPGARSLLFRREEHR*MTLTGSRSCWLRLRGVVLSDKSLPSSRRRLLLR 463
Score = 52.8 bits (109), Expect(2) = 2e-028
Identities = 30/50 (60%), Positives = 31/50 (62%)
Frame = +1 / +2
Query: 124 *TTGRTMAVXXXXXMWSTRTGHLWMPLIWSGAR*TSSGSHLLTSRLTSNV 273
*TT RT A STRTGH LI SGAR*TSS H TSRLTS+V
Sbjct: 101 *TTARTTAASSSSSTSSTRTGHSSTLLI*SGAR*TSSVFH*PTSRLTSSV 250
>gb|CA017707.1|CA017707 HV05P22r HV Hordeum vulgare subsp. vulgare cDNA clone HV05P22
5-PRIME, mRNA sequence
Length = 500
Score = 305 bits (660), Expect = 2e-082
Identities = 131/142 (92%), Positives = 135/142 (95%)
Frame = +3 / +1
Query: 60 AATATARMPFKRFVEIGRVALVNYGKDYGRLVVIVDVVDQNRALVDAPDMVRCQVNFKRL 239
A A A+MPFKRFVEIGRVALVNYGKDYGRLVVIVDVVDQNRALVDAPDM+RCQ+NFKRL
Sbjct: 28 AVAAAAKMPFKRFVEIGRVALVNYGKDYGRLVVIVDVVDQNRALVDAPDMIRCQMNFKRL 207
Query: 240 SLTDIKIDIKRVPKKTTLIKAMEEADVKTKWENSSWGKKLIVQKRRASLNDFDRFKVMLA 419
SLTDIKIDIKR+PKK TLIKAMEEADVKTKWENSSWGKKLIVQKRRASLNDFDRFKVMLA
Sbjct: 208 SLTDIKIDIKRIPKKATLIKAMEEADVKTKWENSSWGKKLIVQKRRASLNDFDRFKVMLA 387
Query: 420 KIKRGGAIRQELAKLKKASTA* 485
KIKRGGAIRQELAKLKK A*
Sbjct: 388 KIKRGGAIRQELAKLKKEVAA* 453
Score = 241 bits (521), Expect = 3e-063
Identities = 112/142 (78%), Positives = 116/142 (81%)
Frame = -3 / -1
Query: 484 *AVDAFLSLASSCLIAPPLLIFASMTLNLSKSLSDALLFWTISFLPHELFSHLVFTSASS 305
*A +FLSLASSCLIAPPLLI A+MTLNLSKS SDALLF TISFLP ELFSHLVFTSASS
Sbjct: 452 *AATSFLSLASSCLIAPPLLILANMTLNLSKSFSDALLF*TISFLPQELFSHLVFTSASS 273
Query: 304 IALIRVVFLGTRLMSILMSVSESRLKFTWHLTISGASTSALFWXXXXXXXXXRP*SFP*F 125
+ALI+V FLG RLMSILMSVSE RLKF WHL ISGASTSA FW RP*S P*F
Sbjct: 272 MALIKVAFLGIRLMSILMSVSERRLKFIWHLIISGASTSARFWSTTSTMTTRRP*SLP*F 93
Query: 124 TRATRPISTNLLNGILAVAVAA 59
TRATRPISTNLLNGI A A A
Sbjct: 92 TRATRPISTNLLNGIFAAAATA 27
Score = 226 bits (488), Expect = 1e-058
Identities = 95/146 (65%), Positives = 108/146 (73%)
Frame = -2 / -3
Query: 485 LSCGRLLKLGELLPDSTTPLNLRQHDFEPIKVIERCSPLLDNQXXXXXXXXXXXLHISFL 306
LS LL+LG+LL DSTTPLNL QHD EP+KVI+RCS LL+N+ HISFL
Sbjct: 453 LSSNLLLELGKLLSDSTTPLNLSQHDLEPVKVIQRCSSLLNNKLLAPGAVLPFGFHISFL 274
Query: 305 HRLDQGCLLGDTFDVNLDVSK*EPLEVHLAPDHIRGIHKCPVLVDHIDDDDETAIVLPVV 126
H LDQ CL GDT DVNLDV +*+ LEVHLAPDHIR + +CPVLVD +DDDDE A+VL VV
Sbjct: 273 HGLDQSCLFGDTLDVNLDVGQ*KTLEVHLAPDHIRSVDECPVLVDDVDDDDEAAVVLAVV 94
Query: 125 HQGHAPDLHEPLERHPRGGGGGAVKR 48
HQGH PDL EPLERH GG G +R
Sbjct: 93 HQGHPPDLDEPLERHLCGGCDGGEER 16
Score = 205 bits (442), Expect = 3e-052
Identities = 94/133 (70%), Positives = 103/133 (77%)
Frame = +2 / +3
Query: 74 REDAVQEVRGDRARGPGELREGLWPSRRHRRCGRPEQGTCGCP*YGQVPGELQAALTY*H 253
R+DAVQEVR DRA GPGELR+GL P RRHRR RPE GT *Y QVP ELQA+ T H
Sbjct: 42 RKDAVQEVRRDRAGGPGELRQGLRPPRRHRRRRRPEPGTRRRS*YDQVPDELQASFTDRH 221
Query: 254 QD*HQTCPQEDNPDQGDGGS*CEDQVGEQLMGQEADCPEEESIAQ*L**VQSHAGED*EG 433
QD*HQ PQ+ N DQG GGS*CE+Q+GEQL+GQEA C EE+SIA+*L* VQ H G D*EG
Sbjct: 222 QD*HQAYPQKGNFDQGHGGS*CENQMGEQLLGQEAYCSEEKSIAE*L*QVQGHVG*D*EG 401
Query: 434 WCYQARARQA*EG 472
WCYQ RA QA EG
Sbjct: 402 WCYQTRACQAQEG 440
Score = 92.7 bits (196), Expect(2) = 2e-028
Identities = 43/59 (72%), Positives = 47/59 (79%)
Frame = +1 / +2
Query: 310 KLM*RPSGRTAHGARS*LSRRGEHRSMTLIGSKSCWRRLRGVVLSGKSSPSLRRRPQLK 486
KLM*+P+GRTA GARS L RR EHR MTL GS+SCW RLRGVVLS KS PS RRR L+
Sbjct: 278 KLM*KPNGRTAPGARSLLFRREEHR*MTLTGSRSCWLRLRGVVLSDKSLPSSRRRLLLR 454
Score = 52.8 bits (109), Expect(2) = 2e-028
Identities = 30/50 (60%), Positives = 31/50 (62%)
Frame = +1 / +2
Query: 124 *TTGRTMAVXXXXXMWSTRTGHLWMPLIWSGAR*TSSGSHLLTSRLTSNV 273
*TT RT A STRTGH LI SGAR*TSS H TSRLTS+V
Sbjct: 92 *TTARTTAASSSSSTSSTRTGHSSTLLI*SGAR*TSSVFH*PTSRLTSSV 241
>gb|CK124268.1|CK124268 BES1824108c13 BES1824 Hordeum vulgare subsp. vulgare cDNA clone
MPMGp2010C138 5-PRIME, mRNA sequence
Length = 575
Score = 305 bits (660), Expect = 2e-082
Identities = 131/142 (92%), Positives = 135/142 (95%)
Frame = +3 / +2
Query: 60 AATATARMPFKRFVEIGRVALVNYGKDYGRLVVIVDVVDQNRALVDAPDMVRCQVNFKRL 239
A A A+MPFKRFVEIGRVALVNYGKDYGRLVVIVDVVDQNRALVDAPDM+RCQ+NFKRL
Sbjct: 38 AVAAAAKMPFKRFVEIGRVALVNYGKDYGRLVVIVDVVDQNRALVDAPDMIRCQMNFKRL 217
Query: 240 SLTDIKIDIKRVPKKTTLIKAMEEADVKTKWENSSWGKKLIVQKRRASLNDFDRFKVMLA 419
SLTDIKIDIKR+PKK TLIKAMEEADVKTKWENSSWGKKLIVQKRRASLNDFDRFKVMLA
Sbjct: 218 SLTDIKIDIKRIPKKATLIKAMEEADVKTKWENSSWGKKLIVQKRRASLNDFDRFKVMLA 397
Query: 420 KIKRGGAIRQELAKLKKASTA* 485
KIKRGGAIRQELAKLKK A*
Sbjct: 398 KIKRGGAIRQELAKLKKEVAA* 463
Score = 241 bits (521), Expect = 3e-063
Identities = 112/142 (78%), Positives = 116/142 (81%)
Frame = -3 / -3
Query: 484 *AVDAFLSLASSCLIAPPLLIFASMTLNLSKSLSDALLFWTISFLPHELFSHLVFTSASS 305
*A +FLSLASSCLIAPPLLI A+MTLNLSKS SDALLF TISFLP ELFSHLVFTSASS
Sbjct: 462 *AATSFLSLASSCLIAPPLLILANMTLNLSKSFSDALLF*TISFLPQELFSHLVFTSASS 283
Query: 304 IALIRVVFLGTRLMSILMSVSESRLKFTWHLTISGASTSALFWXXXXXXXXXRP*SFP*F 125
+ALI+V FLG RLMSILMSVSE RLKF WHL ISGASTSA FW RP*S P*F
Sbjct: 282 MALIKVAFLGIRLMSILMSVSERRLKFIWHLIISGASTSARFWSTTSTMTTRRP*SLP*F 103
Query: 124 TRATRPISTNLLNGILAVAVAA 59
TRATRPISTNLLNGI A A A
Sbjct: 102 TRATRPISTNLLNGIFAAAATA 37
Score = 226 bits (488), Expect = 1e-058
Identities = 95/146 (65%), Positives = 108/146 (73%)
Frame = -2 / -2
Query: 485 LSCGRLLKLGELLPDSTTPLNLRQHDFEPIKVIERCSPLLDNQXXXXXXXXXXXLHISFL 306
LS LL+LG+LL DSTTPLNL QHD EP+KVI+RCS LL+N+ HISFL
Sbjct: 463 LSSNLLLELGKLLSDSTTPLNLSQHDLEPVKVIQRCSSLLNNKLLAPGAVLPFGFHISFL 284
Query: 305 HRLDQGCLLGDTFDVNLDVSK*EPLEVHLAPDHIRGIHKCPVLVDHIDDDDETAIVLPVV 126
H LDQ CL GDT DVNLDV +*+ LEVHLAPDHIR + +CPVLVD +DDDDE A+VL VV
Sbjct: 283 HGLDQSCLFGDTLDVNLDVGQ*KTLEVHLAPDHIRSVDECPVLVDDVDDDDEAAVVLAVV 104
Query: 125 HQGHAPDLHEPLERHPRGGGGGAVKR 48
HQGH PDL EPLERH GG G +R
Sbjct: 103 HQGHPPDLDEPLERHLCGGCDGGEER 26
Score = 205 bits (442), Expect = 3e-052
Identities = 94/133 (70%), Positives = 103/133 (77%)
Frame = +2 / +1
Query: 74 REDAVQEVRGDRARGPGELREGLWPSRRHRRCGRPEQGTCGCP*YGQVPGELQAALTY*H 253
R+DAVQEVR DRA GPGELR+GL P RRHRR RPE GT *Y QVP ELQA+ T H
Sbjct: 52 RKDAVQEVRRDRAGGPGELRQGLRPPRRHRRRRRPEPGTRRRS*YDQVPDELQASFTDRH 231
Query: 254 QD*HQTCPQEDNPDQGDGGS*CEDQVGEQLMGQEADCPEEESIAQ*L**VQSHAGED*EG 433
QD*HQ PQ+ N DQG GGS*CE+Q+GEQL+GQEA C EE+SIA+*L* VQ H G D*EG
Sbjct: 232 QD*HQAYPQKGNFDQGHGGS*CENQMGEQLLGQEAYCSEEKSIAE*L*QVQGHVG*D*EG 411
Query: 434 WCYQARARQA*EG 472
WCYQ RA QA EG
Sbjct: 412 WCYQTRACQAQEG 450
Score = 92.7 bits (196), Expect(2) = 2e-028
Identities = 43/59 (72%), Positives = 47/59 (79%)
Frame = +1 / +3
Query: 310 KLM*RPSGRTAHGARS*LSRRGEHRSMTLIGSKSCWRRLRGVVLSGKSSPSLRRRPQLK 486
KLM*+P+GRTA GARS L RR EHR MTL GS+SCW RLRGVVLS KS PS RRR L+
Sbjct: 288 KLM*KPNGRTAPGARSLLFRREEHR*MTLTGSRSCWLRLRGVVLSDKSLPSSRRRLLLR 464
Score = 52.8 bits (109), Expect(2) = 2e-028
Identities = 30/50 (60%), Positives = 31/50 (62%)
Frame = +1 / +3
Query: 124 *TTGRTMAVXXXXXMWSTRTGHLWMPLIWSGAR*TSSGSHLLTSRLTSNV 273
*TT RT A STRTGH LI SGAR*TSS H TSRLTS+V
Sbjct: 102 *TTARTTAASSSSSTSSTRTGHSSTLLI*SGAR*TSSVFH*PTSRLTSSV 251
>gb|BJ463126.1|BJ463126 BJ463126 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags25o09 5', mRNA sequence
Length = 567
Score = 301 bits (652), Expect(2) = 3e-082
Identities = 129/139 (92%), Positives = 133/139 (95%)
Frame = +3 / +3
Query: 69 ATARMPFKRFVEIGRVALVNYGKDYGRLVVIVDVVDQNRALVDAPDMVRCQVNFKRLSLT 248
A A+MPFKRFVEIGRVALVNYGKDYGRLVVIVDVVDQNRALVDAPDM+RCQ+NFKRLSLT
Sbjct: 27 AAAKMPFKRFVEIGRVALVNYGKDYGRLVVIVDVVDQNRALVDAPDMIRCQMNFKRLSLT 206
Query: 249 DIKIDIKRVPKKTTLIKAMEEADVKTKWENSSWGKKLIVQKRRASLNDFDRFKVMLAKIK 428
DIKIDIKR+PKK TLIKAMEEADVKTKWENSSWGKKLIVQKRRASLNDFDRFKVML KIK
Sbjct: 207 DIKIDIKRIPKKATLIKAMEEADVKTKWENSSWGKKLIVQKRRASLNDFDRFKVMLVKIK 386
Query: 429 RGGAIRQELAKLKKASTA* 485
RGGAIRQELAKLKK A*
Sbjct: 387 RGGAIRQELAKLKKEVAA* 443
Score = 237 bits (513), Expect(2) = 3e-067
Identities = 110/139 (79%), Positives = 114/139 (82%)
Frame = -3 / -3
Query: 484 *AVDAFLSLASSCLIAPPLLIFASMTLNLSKSLSDALLFWTISFLPHELFSHLVFTSASS 305
*A +FLSLASSCLIAPPLLI +MTLNLSKS SDALLF TISFLP ELFSHLVFTSASS
Sbjct: 442 *AATSFLSLASSCLIAPPLLILTNMTLNLSKSFSDALLF*TISFLPQELFSHLVFTSASS 263
Query: 304 IALIRVVFLGTRLMSILMSVSESRLKFTWHLTISGASTSALFWXXXXXXXXXRP*SFP*F 125
+ALI+V FLG RLMSILMSVSE RLKF WHL ISGASTSA FW RP*S P*F
Sbjct: 262 MALIKVAFLGIRLMSILMSVSERRLKFIWHLIISGASTSARFWSTTSTMTTRRP*SLP*F 83
Query: 124 TRATRPISTNLLNGILAVA 68
TRATRPISTNLLNGI A A
Sbjct: 82 TRATRPISTNLLNGIFAAA 26
Score = 229 bits (495), Expect(2) = 4e-060
Identities = 95/139 (68%), Positives = 107/139 (76%)
Frame = -2 / -2
Query: 485 LSCGRLLKLGELLPDSTTPLNLRQHDFEPIKVIERCSPLLDNQXXXXXXXXXXXLHISFL 306
LS LL+LG+LLPDSTTPLNL QHD EP+KVI+RCS LL+N+ HISFL
Sbjct: 443 LSSNLLLELGKLLPDSTTPLNLNQHDLEPVKVIQRCSSLLNNKLLAPGAVLPFGFHISFL 264
Query: 305 HRLDQGCLLGDTFDVNLDVSK*EPLEVHLAPDHIRGIHKCPVLVDHIDDDDETAIVLPVV 126
H LDQ CL GDT DVNLDVS+*+ LEVHLAPDHIR + +CPVLVD +DDDDE A+VL VV
Sbjct: 263 HGLDQSCLFGDTLDVNLDVSQ*KTLEVHLAPDHIRSVDECPVLVDDVDDDDEAAVVLAVV 84
Query: 125 HQGHAPDLHEPLERHPRGG 69
HQGH PDL EPLERH GG
Sbjct: 83 HQGHPPDLDEPLERHLCGG 27
Score = 211 bits (456), Expect = 3e-054
Identities = 97/135 (71%), Positives = 106/135 (78%)
Frame = +2 / +2
Query: 68 RHREDAVQEVRGDRARGPGELREGLWPSRRHRRCGRPEQGTCGCP*YGQVPGELQAALTY 247
R R+DAVQEVR DRA GPGELR+GL P RRHRR RPE GT *Y QVP ELQA+ T
Sbjct: 26 RRRKDAVQEVRRDRAGGPGELRQGLRPPRRHRRRRRPEPGTRRRS*YDQVPDELQASFTD 205
Query: 248 *HQD*HQTCPQEDNPDQGDGGS*CEDQVGEQLMGQEADCPEEESIAQ*L**VQSHAGED* 427
*HQD*HQ PQ+ N DQG GGS*CE+Q+GEQL+GQEA C EE+SIA+*L* VQ H G D*
Sbjct: 206 *HQD*HQAYPQKGNFDQGHGGS*CENQMGEQLLGQEAYCSEEKSIAE*L*QVQGHVG*D* 385
Query: 428 EGWCYQARARQA*EG 472
EGWCYQARA QA EG
Sbjct: 386 EGWCYQARACQAQEG 430
Score = 95.9 bits (203), Expect(2) = 3e-030
Identities = 44/59 (74%), Positives = 48/59 (81%)
Frame = +1 / +1
Query: 310 KLM*RPSGRTAHGARS*LSRRGEHRSMTLIGSKSCWRRLRGVVLSGKSSPSLRRRPQLK 486
KLM*+P+GRTA GARS L RR EHR MTL GS+SCW RLRGVVLSGKS PS RRR L+
Sbjct: 268 KLM*KPNGRTAPGARSLLFRREEHR*MTLTGSRSCWLRLRGVVLSGKSLPSSRRRLLLR 444
Score = 56.1 bits (116), Expect(2) = 3e-030
Identities = 31/50 (62%), Positives = 32/50 (64%)
Frame = +1 / +1
Query: 124 *TTGRTMAVXXXXXMWSTRTGHLWMPLIWSGAR*TSSGSHLLTSRLTSNV 273
*TT RT A STRTGH LI SGAR*TSS H LTSRLTS+V
Sbjct: 82 *TTARTTAASSSSSTSSTRTGHSSTLLI*SGAR*TSSVFH*LTSRLTSSV 231
Score = 37.7 bits (76), Expect(2) = 3e-067
Identities = 16/30 (53%), Positives = 21/30 (70%)
Frame = -1 / -1
Query: 603 V*NGFTGNILVTLALTTLNRIADPTHNQKL 514
+*N F +++TLAL TL ADPT N+KL
Sbjct: 558 I*NSFLKTVVLTLALRTLEHRADPTWNKKL 469
Score = 24.4 bits (47), Expect(2) = 3e-082
Identities = 12/20 (60%), Positives = 15/20 (75%)
Frame = +2 / +2
Query: 515 SFWL*VGSAIRLSVVKARVT 574
SF VGSA+ SV+KARV+
Sbjct: 470 SFLFQVGSALCSSVLKARVS 529
Score = 22.1 bits (42), Expect(2) = 4e-060
Identities = 14/30 (46%), Positives = 18/30 (60%)
Frame = -2 / -2
Query: 602 FEMGSQGTYW*LWL*QRSIELLIQLITKNS 513
+E+ S +*LWL*+ IQL TKNS
Sbjct: 557 YEIVS*KQLY*LWL*EHWNIEQIQLGTKNS 468
>gb|BQ756834.1|BQ756834 EBem09_SQ003_O10_R embryo, 1 Day germination, no treatment, cv
Optic, EBem09 Hordeum vulgare subsp. vulgare cDNA clone
EBem09_SQ003_O10 5', mRNA sequence
Length = 523
Score = 304 bits (658), Expect = 4e-082
Identities = 131/142 (92%), Positives = 135/142 (95%)
Frame = +3 / +2
Query: 60 AATATARMPFKRFVEIGRVALVNYGKDYGRLVVIVDVVDQNRALVDAPDMVRCQVNFKRL 239
AA A A+MPFKRFVEIGRVALVNYGKDYGRLVVIVDVVDQNRALVDAPDM+RCQ+NFKRL
Sbjct: 38 AAAAAAKMPFKRFVEIGRVALVNYGKDYGRLVVIVDVVDQNRALVDAPDMIRCQMNFKRL 217
Query: 240 SLTDIKIDIKRVPKKTTLIKAMEEADVKTKWENSSWGKKLIVQKRRASLNDFDRFKVMLA 419
SLTDIKIDIKR+PKK TLIKAMEEADVKTKWENSSWGKKLIVQKRRASLNDFDRFKVMLA
Sbjct: 218 SLTDIKIDIKRIPKKATLIKAMEEADVKTKWENSSWGKKLIVQKRRASLNDFDRFKVMLA 397
Query: 420 KIKRGGAIRQELAKLKKASTA* 485
KIKRGGAI QELAKLKK A*
Sbjct: 398 KIKRGGAIXQELAKLKKEVAA* 463
Score = 241 bits (520), Expect = 5e-063
Identities = 112/142 (78%), Positives = 116/142 (81%)
Frame = -3 / -2
Query: 484 *AVDAFLSLASSCLIAPPLLIFASMTLNLSKSLSDALLFWTISFLPHELFSHLVFTSASS 305
*A +FLSLASSC IAPPLLI A+MTLNLSKS SDALLF TISFLP ELFSHLVFTSASS
Sbjct: 462 *AATSFLSLASSCXIAPPLLILANMTLNLSKSFSDALLF*TISFLPQELFSHLVFTSASS 283
Query: 304 IALIRVVFLGTRLMSILMSVSESRLKFTWHLTISGASTSALFWXXXXXXXXXRP*SFP*F 125
+ALI+V FLG RLMSILMSVSE RLKF WHL ISGASTSA FW RP*S P*F
Sbjct: 282 MALIKVAFLGIRLMSILMSVSERRLKFIWHLIISGASTSARFWSTTSTMTTRRP*SLP*F 103
Query: 124 TRATRPISTNLLNGILAVAVAA 59
TRATRPISTNLLNGI A A AA
Sbjct: 102 TRATRPISTNLLNGIFAAAAAA 37
Score = 229 bits (494), Expect = 2e-059
Identities = 96/146 (65%), Positives = 109/146 (74%)
Frame = -2 / -1
Query: 485 LSCGRLLKLGELLPDSTTPLNLRQHDFEPIKVIERCSPLLDNQXXXXXXXXXXXLHISFL 306
LS LL+LG+LL DSTTPLNL QHD EP+KVI+RCS LL+N+ HISFL
Sbjct: 463 LSSNLLLELGKLLXDSTTPLNLSQHDLEPVKVIQRCSSLLNNKLLAPGAVLPFGFHISFL 284
Query: 305 HRLDQGCLLGDTFDVNLDVSK*EPLEVHLAPDHIRGIHKCPVLVDHIDDDDETAIVLPVV 126
H LDQ CL GDT DVNLDV +*+ LEVHLAPDHIR + +CPVLVD +DDDDE A+VL VV
Sbjct: 283 HGLDQSCLFGDTLDVNLDVGQ*KTLEVHLAPDHIRSVDECPVLVDDVDDDDEAAVVLAVV 104
Query: 125 HQGHAPDLHEPLERHPRGGGGGAVKR 48
HQGH PDL EPLERH GG GG +R
Sbjct: 103 HQGHPPDLDEPLERHLCGGCGGGEER 26
Score = 204 bits (441), Expect = 4e-052
Identities = 96/140 (68%), Positives = 106/140 (75%)
Frame = +2 / +1
Query: 74 REDAVQEVRGDRARGPGELREGLWPSRRHRRCGRPEQGTCGCP*YGQVPGELQAALTY*H 253
R+DAVQEVR DRA GPGELR+GL P RRHRR RPE GT *Y QVP ELQA+ T H
Sbjct: 52 RKDAVQEVRRDRAGGPGELRQGLRPPRRHRRRRRPEPGTRRRS*YDQVPDELQASFTDRH 231
Query: 254 QD*HQTCPQEDNPDQGDGGS*CEDQVGEQLMGQEADCPEEESIAQ*L**VQSHAGED*EG 433
QD*HQ PQ+ N DQG GGS*CE+Q+GEQL+GQEA C EE+SIA+*L* VQ H G D*EG
Sbjct: 232 QD*HQAYPQKGNFDQGHGGS*CENQMGEQLLGQEAYCSEEKSIAE*L*QVQGHVG*D*EG 411
Query: 434 WCYQARARQA*EGVHSLRSL 493
WCY ARA QA EG L+ L
Sbjct: 412 WCYXARACQAQEGGCCLKYL 471
Score = 94.1 bits (199), Expect(2) = 9e-029
Identities = 44/59 (74%), Positives = 47/59 (79%)
Frame = +1 / +3
Query: 310 KLM*RPSGRTAHGARS*LSRRGEHRSMTLIGSKSCWRRLRGVVLSGKSSPSLRRRPQLK 486
KLM*+P+GRTA GARS L RR EHR MTL GS+SCW RLRGVVLS KS PS RRR LK
Sbjct: 288 KLM*KPNGRTAPGARSLLFRREEHR*MTLTGSRSCWLRLRGVVLSXKSLPSSRRRLLLK 464
Score = 52.8 bits (109), Expect(2) = 9e-029
Identities = 30/50 (60%), Positives = 31/50 (62%)
Frame = +1 / +3
Query: 124 *TTGRTMAVXXXXXMWSTRTGHLWMPLIWSGAR*TSSGSHLLTSRLTSNV 273
*TT RT A STRTGH LI SGAR*TSS H TSRLTS+V
Sbjct: 102 *TTARTTAASSSSSTSSTRTGHSSTLLI*SGAR*TSSVFH*PTSRLTSSV 251
>gb|CK125878.1|CK125878 BES1824111A1h09 BES1824 Hordeum vulgare subsp. vulgare cDNA clone
MPMGp2010H0911 5-PRIME, mRNA sequence
Length = 632
Score = 300 bits (650), Expect(2) = 5e-082
Identities = 129/142 (90%), Positives = 133/142 (93%)
Frame = +3 / +2
Query: 60 AATATARMPFKRFVEIGRVALVNYGKDYGRLVVIVDVVDQNRALVDAPDMVRCQVNFKRL 239
A A A+MPFKRFVEIGRVALVNYGKDYGRLVVIVD VDQNRALVDAPDM+RCQ+NFKRL
Sbjct: 29 AVAAAAKMPFKRFVEIGRVALVNYGKDYGRLVVIVDAVDQNRALVDAPDMIRCQMNFKRL 208
Query: 240 SLTDIKIDIKRVPKKTTLIKAMEEADVKTKWENSSWGKKLIVQKRRASLNDFDRFKVMLA 419
SLTDIKIDIKR+PKK TLIKAMEEADVKTKWENSSWGKKLIVQKRRASLNDFDRFKV LA
Sbjct: 209 SLTDIKIDIKRIPKKATLIKAMEEADVKTKWENSSWGKKLIVQKRRASLNDFDRFKVXLA 388
Query: 420 KIKRGGAIRQELAKLKKASTA* 485
KIKRGGAIRQELAKLKK A*
Sbjct: 389 KIKRGGAIRQELAKLKKEVAA* 454
Score = 238 bits (515), Expect(2) = 2e-068
Identities = 111/142 (78%), Positives = 115/142 (80%)
Frame = -3 / -3
Query: 484 *AVDAFLSLASSCLIAPPLLIFASMTLNLSKSLSDALLFWTISFLPHELFSHLVFTSASS 305
*A +FLSLASSCLIAPPLLI A+ TLNLSKS SDALLF TISFLP ELFSHLVFTSASS
Sbjct: 453 *AATSFLSLASSCLIAPPLLILANXTLNLSKSFSDALLF*TISFLPQELFSHLVFTSASS 274
Query: 304 IALIRVVFLGTRLMSILMSVSESRLKFTWHLTISGASTSALFWXXXXXXXXXRP*SFP*F 125
+ALI+V FLG RLMSILMSVSE RLKF WHL ISGASTSA FW RP*S P*F
Sbjct: 273 MALIKVAFLGIRLMSILMSVSERRLKFIWHLIISGASTSARFWSTASTMTTRRP*SLP*F 94
Query: 124 TRATRPISTNLLNGILAVAVAA 59
TRATRPISTNLLNGI A A A
Sbjct: 93 TRATRPISTNLLNGIFAAAATA 28
Score = 221 bits (478), Expect(2) = 5e-058
Identities = 94/146 (64%), Positives = 107/146 (73%)
Frame = -2 / -2
Query: 485 LSCGRLLKLGELLPDSTTPLNLRQHDFEPIKVIERCSPLLDNQXXXXXXXXXXXLHISFL 306
LS LL+LG+LL DSTTPLNL Q D EP+KVI+RCS LL+N+ HISFL
Sbjct: 454 LSSNLLLELGKLLSDSTTPLNLSQXDLEPVKVIQRCSSLLNNKLLAPGAVLPFGFHISFL 275
Query: 305 HRLDQGCLLGDTFDVNLDVSK*EPLEVHLAPDHIRGIHKCPVLVDHIDDDDETAIVLPVV 126
H LDQ CL GDT DVNLDV +*+ LEVHLAPDHIR + +CPVLVD +DDDDE A+VL VV
Sbjct: 274 HGLDQSCLFGDTLDVNLDVGQ*KTLEVHLAPDHIRSVDECPVLVDGVDDDDEAAVVLAVV 95
Query: 125 HQGHAPDLHEPLERHPRGGGGGAVKR 48
HQGH PDL EPLERH GG G +R
Sbjct: 94 HQGHPPDLDEPLERHLCGGCDGGEER 17
Score = 201 bits (433), Expect = 5e-051
Identities = 93/133 (69%), Positives = 102/133 (76%)
Frame = +2 / +1
Query: 74 REDAVQEVRGDRARGPGELREGLWPSRRHRRCGRPEQGTCGCP*YGQVPGELQAALTY*H 253
R+DAVQEVR DRA GPGELR+GL P RRHRR RPE GT *Y QVP ELQA+ T H
Sbjct: 43 RKDAVQEVRRDRAGGPGELRQGLRPPRRHRRRRRPEPGTRRRS*YDQVPDELQASFTDRH 222
Query: 254 QD*HQTCPQEDNPDQGDGGS*CEDQVGEQLMGQEADCPEEESIAQ*L**VQSHAGED*EG 433
QD*HQ PQ+ N DQG GGS*CE+Q+GEQL+GQEA C EE+SIA+*L* VQ G D*EG
Sbjct: 223 QD*HQAYPQKGNFDQGHGGS*CENQMGEQLLGQEAYCSEEKSIAE*L*QVQGXVG*D*EG 402
Query: 434 WCYQARARQA*EG 472
WCYQ RA QA EG
Sbjct: 403 WCYQTRACQAQEG 441
Score = 92.7 bits (196), Expect(2) = 3e-028
Identities = 43/59 (72%), Positives = 47/59 (79%)
Frame = +1 / +3
Query: 310 KLM*RPSGRTAHGARS*LSRRGEHRSMTLIGSKSCWRRLRGVVLSGKSSPSLRRRPQLK 486
KLM*+P+GRTA GARS L RR EHR MTL GS+SCW RLRGVVLS KS PS RRR L+
Sbjct: 279 KLM*KPNGRTAPGARSLLFRREEHR*MTLTGSRSCWLRLRGVVLSDKSLPSSRRRLLLR 455
Score = 52.4 bits (108), Expect(2) = 3e-028
Identities = 30/50 (60%), Positives = 31/50 (62%)
Frame = +1 / +3
Query: 124 *TTGRTMAVXXXXXMWSTRTGHLWMPLIWSGAR*TSSGSHLLTSRLTSNV 273
*TT RT A STRTGH LI SGAR*TSS H TSRLTS+V
Sbjct: 93 *TTARTTAASSSSSTPSTRTGHSSTLLI*SGAR*TSSVFH*PTSRLTSSV 242
Score = 40.9 bits (83), Expect(2) = 2e-068
Identities = 17/32 (53%), Positives = 23/32 (71%)
Frame = -1 / -1
Query: 609 DKV*NGFTGNILVTLALTTLNRIADPTHNQKL 514
+K+*N F +++TLAL TL ADPT N+KL
Sbjct: 575 EKI*NSFLKTVVLTLALRTLEHRADPTWNKKL 480
Score = 24.4 bits (47), Expect(2) = 5e-082
Identities = 12/20 (60%), Positives = 15/20 (75%)
Frame = +2 / +1
Query: 515 SFWL*VGSAIRLSVVKARVT 574
SF VGSA+ SV+KARV+
Sbjct: 481 SFLFQVGSALCSSVLKARVS 540
Score = 23.1 bits (44), Expect(2) = 5e-058
Identities = 14/31 (45%), Positives = 19/31 (61%)
Frame = -2 / -2
Query: 605 KFEMGSQGTYW*LWL*QRSIELLIQLITKNS 513
++E+ S +*LWL*+ IQL TKNS
Sbjct: 571 RYEIVS*KQLY*LWL*EHWNIEQIQLGTKNS 479
>gb|BQ761233.1|BQ761233 EBro04_SQ004_M16_R root, 3 week, salt-stressed, cv Optic, EBro04
Hordeum vulgare subsp. vulgare cDNA clone
EBro04_SQ004_M16 5', mRNA sequence
Length = 538
Score = 303 bits (657), Expect = 6e-082
Identities = 130/141 (92%), Positives = 134/141 (95%)
Frame = +3 / +2
Query: 60 AATATARMPFKRFVEIGRVALVNYGKDYGRLVVIVDVVDQNRALVDAPDMVRCQVNFKRL 239
AA A A+MPFKRFVEIGRVALVNYGKDYGRLVVIVDVVDQNRALVDAPDM+RCQ+NFKRL
Sbjct: 38 AAAAAAKMPFKRFVEIGRVALVNYGKDYGRLVVIVDVVDQNRALVDAPDMIRCQMNFKRL 217
Query: 240 SLTDIKIDIKRVPKKTTLIKAMEEADVKTKWENSSWGKKLIVQKRRASLNDFDRFKVMLA 419
SLTDIKIDIKR+PKK TLIKAMEEADVKTKWENSSWGKKLIVQKRRASLNDFDRFKVMLA
Sbjct: 218 SLTDIKIDIKRIPKKATLIKAMEEADVKTKWENSSWGKKLIVQKRRASLNDFDRFKVMLA 397
Query: 420 KIKRGGAIRQELAKLKKASTA 482
KIKRGGAI QELAKLKK A
Sbjct: 398 KIKRGGAIMQELAKLKKEVAA 460
Score = 242 bits (523), Expect = 2e-063
Identities = 112/142 (78%), Positives = 117/142 (82%)
Frame = -3 / -2
Query: 484 *AVDAFLSLASSCLIAPPLLIFASMTLNLSKSLSDALLFWTISFLPHELFSHLVFTSASS 305
*A +FLSLASSC+IAPPLLI A+MTLNLSKS SDALLF TISFLP ELFSHLVFTSASS
Sbjct: 462 *AATSFLSLASSCMIAPPLLILANMTLNLSKSFSDALLF*TISFLPQELFSHLVFTSASS 283
Query: 304 IALIRVVFLGTRLMSILMSVSESRLKFTWHLTISGASTSALFWXXXXXXXXXRP*SFP*F 125
+ALI+V FLG RLMSILMSVSE RLKF WHL ISGASTSA FW RP*S P*F
Sbjct: 282 MALIKVAFLGIRLMSILMSVSERRLKFIWHLIISGASTSARFWSTTSTMTTRRP*SLP*F 103
Query: 124 TRATRPISTNLLNGILAVAVAA 59
TRATRPISTNLLNGI A A AA
Sbjct: 102 TRATRPISTNLLNGIFAAAAAA 37
Score = 225 bits (486), Expect = 2e-058
Identities = 94/145 (64%), Positives = 107/145 (73%)
Frame = -2 / -1
Query: 482 SCGRLLKLGELLPDSTTPLNLRQHDFEPIKVIERCSPLLDNQXXXXXXXXXXXLHISFLH 303
S L+LG+LL DSTTPLNL QHD EP+KVI+RCS LL+N+ HISFLH
Sbjct: 460 SSNLFLELGKLLHDSTTPLNLSQHDLEPVKVIQRCSSLLNNKLLAPGAVLPFGFHISFLH 281
Query: 302 RLDQGCLLGDTFDVNLDVSK*EPLEVHLAPDHIRGIHKCPVLVDHIDDDDETAIVLPVVH 123
LDQ CL GDT DVNLDV +*+ LEVHLAPDHIR + +CPVLVD +DDDDE A+VL VVH
Sbjct: 280 GLDQSCLFGDTLDVNLDVGQ*KTLEVHLAPDHIRSVDECPVLVDDVDDDDEAAVVLAVVH 101
Query: 122 QGHAPDLHEPLERHPRGGGGGAVKR 48
QGH PDL EPLERH GG GG +R
Sbjct: 100 QGHPPDLDEPLERHLCGGCGGGEER 26
Score = 202 bits (435), Expect = 2e-051
Identities = 93/132 (70%), Positives = 102/132 (77%)
Frame = +2 / +1
Query: 74 REDAVQEVRGDRARGPGELREGLWPSRRHRRCGRPEQGTCGCP*YGQVPGELQAALTY*H 253
R+DAVQEVR DRA GPGELR+GL P RRHRR RPE GT *Y QVP ELQA+ T H
Sbjct: 52 RKDAVQEVRRDRAGGPGELRQGLRPPRRHRRRRRPEPGTRRRS*YDQVPDELQASFTDRH 231
Query: 254 QD*HQTCPQEDNPDQGDGGS*CEDQVGEQLMGQEADCPEEESIAQ*L**VQSHAGED*EG 433
QD*HQ PQ+ N DQG GGS*CE+Q+GEQL+GQEA C EE+SIA+*L* VQ H G D*EG
Sbjct: 232 QD*HQAYPQKGNFDQGHGGS*CENQMGEQLLGQEAYCSEEKSIAE*L*QVQGHVG*D*EG 411
Query: 434 WCYQARARQA*E 469
WCY ARA QA E
Sbjct: 412 WCYHARACQAQE 447
Score = 90.0 bits (190), Expect(2) = 1e-027
Identities = 41/55 (74%), Positives = 45/55 (81%)
Frame = +1 / +3
Query: 310 KLM*RPSGRTAHGARS*LSRRGEHRSMTLIGSKSCWRRLRGVVLSGKSSPSLRRR 474
KLM*+P+GRTA GARS L RR EHR MTL GS+SCW RLRGVVLS KS PS R+R
Sbjct: 288 KLM*KPNGRTAPGARSLLFRREEHR*MTLTGSRSCWLRLRGVVLSCKSLPSSRKR 452
Score = 52.8 bits (109), Expect(2) = 1e-027
Identities = 30/50 (60%), Positives = 31/50 (62%)
Frame = +1 / +3
Query: 124 *TTGRTMAVXXXXXMWSTRTGHLWMPLIWSGAR*TSSGSHLLTSRLTSNV 273
*TT RT A STRTGH LI SGAR*TSS H TSRLTS+V
Sbjct: 102 *TTARTTAASSSSSTSSTRTGHSSTLLI*SGAR*TSSVFH*PTSRLTSSV 251
>gb|AW982424.3|AW982424 HVSMEg0003D18f Hordeum vulgare pre-anthesis spike EST library
HVcDNA0008 (white to yellow anther) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEg0003D18f, mRNA sequence
Length = 559
Score = 303 bits (656), Expect = 8e-082
Identities = 130/139 (93%), Positives = 134/139 (96%)
Frame = +3 / +1
Query: 69 ATARMPFKRFVEIGRVALVNYGKDYGRLVVIVDVVDQNRALVDAPDMVRCQVNFKRLSLT 248
A A+MPFKRFVEIGRVALVNYGKDYGRLVVIVDVVDQNRALVDAPDM+RCQ+NFKRLSLT
Sbjct: 28 AAAKMPFKRFVEIGRVALVNYGKDYGRLVVIVDVVDQNRALVDAPDMIRCQMNFKRLSLT 207
Query: 249 DIKIDIKRVPKKTTLIKAMEEADVKTKWENSSWGKKLIVQKRRASLNDFDRFKVMLAKIK 428
DIKIDIKR+PKK TLIKAMEEADVKTKWENSSWGKKLIVQKRRASLNDFDRFKVMLAKIK
Sbjct: 208 DIKIDIKRIPKKATLIKAMEEADVKTKWENSSWGKKLIVQKRRASLNDFDRFKVMLAKIK 387
Query: 429 RGGAIRQELAKLKKASTA* 485
RGGAIRQELAKLKK A*
Sbjct: 388 RGGAIRQELAKLKKEVAA* 444
Score = 239 bits (517), Expect = 1e-062
Identities = 111/139 (79%), Positives = 115/139 (82%)
Frame = -3 / -3
Query: 484 *AVDAFLSLASSCLIAPPLLIFASMTLNLSKSLSDALLFWTISFLPHELFSHLVFTSASS 305
*A +FLSLASSCLIAPPLLI A+MTLNLSKS SDALLF TISFLP ELFSHLVFTSASS
Sbjct: 443 *AATSFLSLASSCLIAPPLLILANMTLNLSKSFSDALLF*TISFLPQELFSHLVFTSASS 264
Query: 304 IALIRVVFLGTRLMSILMSVSESRLKFTWHLTISGASTSALFWXXXXXXXXXRP*SFP*F 125
+ALI+V FLG RLMSILMSVSE RLKF WHL ISGASTSA FW RP*S P*F
Sbjct: 263 MALIKVAFLGIRLMSILMSVSERRLKFIWHLIISGASTSARFWSTTSTMTTRRP*SLP*F 84
Query: 124 TRATRPISTNLLNGILAVA 68
TRATRPISTNLLNGI A A
Sbjct: 83 TRATRPISTNLLNGIFAAA 27
Score = 227 bits (490), Expect = 6e-059
Identities = 94/139 (67%), Positives = 106/139 (76%)
Frame = -2 / -2
Query: 485 LSCGRLLKLGELLPDSTTPLNLRQHDFEPIKVIERCSPLLDNQXXXXXXXXXXXLHISFL 306
LS L +LG+LLPDSTTPLNL QHD EP+KVI+RCS LL+N+ HISFL
Sbjct: 444 LSSNLLFELGKLLPDSTTPLNLSQHDLEPVKVIQRCSSLLNNKLLAPGAVLPFGFHISFL 265
Query: 305 HRLDQGCLLGDTFDVNLDVSK*EPLEVHLAPDHIRGIHKCPVLVDHIDDDDETAIVLPVV 126
H LDQ CL GDT DVNLDVS+*+ LEVHLAPDHIR + +CPVLVD +DDDDE A+VL VV
Sbjct: 264 HGLDQSCLFGDTLDVNLDVSQ*KTLEVHLAPDHIRSVDECPVLVDDVDDDDEAAVVLAVV 85
Query: 125 HQGHAPDLHEPLERHPRGG 69
HQGH PDL EPLERH GG
Sbjct: 84 HQGHPPDLDEPLERHLCGG 28
Score = 210 bits (452), Expect = 1e-053
Identities = 96/135 (71%), Positives = 106/135 (78%)
Frame = +2 / +3
Query: 68 RHREDAVQEVRGDRARGPGELREGLWPSRRHRRCGRPEQGTCGCP*YGQVPGELQAALTY 247
R R+DAVQEVR DRA GPGELR+GL P RRHRR RPE GT *Y QVP ELQA+ T
Sbjct: 27 RRRKDAVQEVRRDRAGGPGELRQGLRPPRRHRRRRRPEPGTRRRS*YDQVPDELQASFTD 206
Query: 248 *HQD*HQTCPQEDNPDQGDGGS*CEDQVGEQLMGQEADCPEEESIAQ*L**VQSHAGED* 427
*HQD*HQ PQ+ N DQG GGS*CE+Q+GEQL+GQEA C EE+SIA+*L* VQ H G D*
Sbjct: 207 *HQD*HQAYPQKGNFDQGHGGS*CENQMGEQLLGQEAYCSEEKSIAE*L*QVQGHVG*D* 386
Query: 428 EGWCYQARARQA*EG 472
EGWCYQARA QA +G
Sbjct: 387 EGWCYQARACQAQKG 431
Score = 94.5 bits (200), Expect(2) = 7e-030
Identities = 43/59 (72%), Positives = 48/59 (81%)
Frame = +1 / +2
Query: 310 KLM*RPSGRTAHGARS*LSRRGEHRSMTLIGSKSCWRRLRGVVLSGKSSPSLRRRPQLK 486
KLM*+P+GRTA GARS L RR EHR MTL GS+SCW RLRGVVLSGKS PS +RR L+
Sbjct: 269 KLM*KPNGRTAPGARSLLFRREEHR*MTLTGSRSCWLRLRGVVLSGKSLPSSKRRLLLR 445
Score = 56.1 bits (116), Expect(2) = 7e-030
Identities = 31/50 (62%), Positives = 32/50 (64%)
Frame = +1 / +2
Query: 124 *TTGRTMAVXXXXXMWSTRTGHLWMPLIWSGAR*TSSGSHLLTSRLTSNV 273
*TT RT A STRTGH LI SGAR*TSS H LTSRLTS+V
Sbjct: 83 *TTARTTAASSSSSTSSTRTGHSSTLLI*SGAR*TSSVFH*LTSRLTSSV 232
>gb|AJ460495.1|AJ460495 AJ460495 S00002 Hordeum vulgare subsp. vulgare cDNA clone
S0000200079E07F1, mRNA sequence
Length = 420
Score = 303 bits (656), Expect = 8e-082
Identities = 130/139 (93%), Positives = 134/139 (96%)
Frame = +3 / +3
Query: 69 ATARMPFKRFVEIGRVALVNYGKDYGRLVVIVDVVDQNRALVDAPDMVRCQVNFKRLSLT 248
A A+MPFKRFVEIGRVALVNYGKDYGRLVVIVDVVDQNRALVDAPDM+RCQ+NFKRLSLT
Sbjct: 3 AAAKMPFKRFVEIGRVALVNYGKDYGRLVVIVDVVDQNRALVDAPDMIRCQMNFKRLSLT 182
Query: 249 DIKIDIKRVPKKTTLIKAMEEADVKTKWENSSWGKKLIVQKRRASLNDFDRFKVMLAKIK 428
DIKIDIKR+PKK TLIKAMEEADVKTKWENSSWGKKLIVQKRRASLNDFDRFKVMLAKIK
Sbjct: 183 DIKIDIKRIPKKATLIKAMEEADVKTKWENSSWGKKLIVQKRRASLNDFDRFKVMLAKIK 362
Query: 429 RGGAIRQELAKLKKASTA* 485
RGGAIRQELAKLKK A*
Sbjct: 363 RGGAIRQELAKLKKEVAA* 419
Score = 239 bits (517), Expect = 1e-062
Identities = 111/139 (79%), Positives = 115/139 (82%)
Frame = -3 / -3
Query: 484 *AVDAFLSLASSCLIAPPLLIFASMTLNLSKSLSDALLFWTISFLPHELFSHLVFTSASS 305
*A +FLSLASSCLIAPPLLI A+MTLNLSKS SDALLF TISFLP ELFSHLVFTSASS
Sbjct: 418 *AATSFLSLASSCLIAPPLLILANMTLNLSKSFSDALLF*TISFLPQELFSHLVFTSASS 239
Query: 304 IALIRVVFLGTRLMSILMSVSESRLKFTWHLTISGASTSALFWXXXXXXXXXRP*SFP*F 125
+ALI+V FLG RLMSILMSVSE RLKF WHL ISGASTSA FW RP*S P*F
Sbjct: 238 MALIKVAFLGIRLMSILMSVSERRLKFIWHLIISGASTSARFWSTTSTMTTRRP*SLP*F 59
Query: 124 TRATRPISTNLLNGILAVA 68
TRATRPISTNLLNGI A A
Sbjct: 58 TRATRPISTNLLNGIFAAA 2
Score = 229 bits (494), Expect = 2e-059
Identities = 95/139 (68%), Positives = 107/139 (76%)
Frame = -2 / -2
Query: 485 LSCGRLLKLGELLPDSTTPLNLRQHDFEPIKVIERCSPLLDNQXXXXXXXXXXXLHISFL 306
LS LL+LG+LLPDSTTPLNL QHD EP+KVI+RCS LL+N+ HISFL
Sbjct: 419 LSSNLLLELGKLLPDSTTPLNLSQHDLEPVKVIQRCSSLLNNKLLAPGAVLPFGFHISFL 240
Query: 305 HRLDQGCLLGDTFDVNLDVSK*EPLEVHLAPDHIRGIHKCPVLVDHIDDDDETAIVLPVV 126
H LDQ CL GDT DVNLDVS+*+ LEVHLAPDHIR + +CPVLVD +DDDDE A+VL VV
Sbjct: 239 HGLDQSCLFGDTLDVNLDVSQ*KTLEVHLAPDHIRSVDECPVLVDDVDDDDEAAVVLAVV 60
Query: 125 HQGHAPDLHEPLERHPRGG 69
HQGH PDL EPLERH GG
Sbjct: 59 HQGHPPDLDEPLERHLCGG 3
Score = 211 bits (456), Expect = 3e-054
Identities = 97/135 (71%), Positives = 106/135 (78%)
Frame = +2 / +2
Query: 68 RHREDAVQEVRGDRARGPGELREGLWPSRRHRRCGRPEQGTCGCP*YGQVPGELQAALTY 247
R R+DAVQEVR DRA GPGELR+GL P RRHRR RPE GT *Y QVP ELQA+ T
Sbjct: 2 RRRKDAVQEVRRDRAGGPGELRQGLRPPRRHRRRRRPEPGTRRRS*YDQVPDELQASFTD 181
Query: 248 *HQD*HQTCPQEDNPDQGDGGS*CEDQVGEQLMGQEADCPEEESIAQ*L**VQSHAGED* 427
*HQD*HQ PQ+ N DQG GGS*CE+Q+GEQL+GQEA C EE+SIA+*L* VQ H G D*
Sbjct: 182 *HQD*HQAYPQKGNFDQGHGGS*CENQMGEQLLGQEAYCSEEKSIAE*L*QVQGHVG*D* 361
Query: 428 EGWCYQARARQA*EG 472
EGWCYQARA QA EG
Sbjct: 362 EGWCYQARACQAQEG 406
Score = 95.9 bits (203), Expect(2) = 3e-030
Identities = 44/59 (74%), Positives = 48/59 (81%)
Frame = +1 / +1
Query: 310 KLM*RPSGRTAHGARS*LSRRGEHRSMTLIGSKSCWRRLRGVVLSGKSSPSLRRRPQLK 486
KLM*+P+GRTA GARS L RR EHR MTL GS+SCW RLRGVVLSGKS PS RRR L+
Sbjct: 244 KLM*KPNGRTAPGARSLLFRREEHR*MTLTGSRSCWLRLRGVVLSGKSLPSSRRRLLLR 420
Score = 56.1 bits (116), Expect(2) = 3e-030
Identities = 31/50 (62%), Positives = 32/50 (64%)
Frame = +1 / +1
Query: 124 *TTGRTMAVXXXXXMWSTRTGHLWMPLIWSGAR*TSSGSHLLTSRLTSNV 273
*TT RT A STRTGH LI SGAR*TSS H LTSRLTS+V
Sbjct: 58 *TTARTTAASSSSSTSSTRTGHSSTLLI*SGAR*TSSVFH*LTSRLTSSV 207
>gb|BE420961.1|BE420961 HWM004.D02 ITEC HWM Barley Leaf Library Hordeum vulgare subsp.
vulgare cDNA clone HWM004.D02, mRNA sequence
Length = 1328
Score = 299 bits (648), Expect(2) = 9e-082
Identities = 129/142 (90%), Positives = 133/142 (93%)
Frame = +3 / +3
Query: 60 AATATARMPFKRFVEIGRVALVNYGKDYGRLVVIVDVVDQNRALVDAPDMVRCQVNFKRL 239
A A A+MPFKRFVEIGRVALVNYGKDYGRLVVIVDVVDQNRALVDAPDM+RCQ+NFKRL
Sbjct: 159 AVAAAAKMPFKRFVEIGRVALVNYGKDYGRLVVIVDVVDQNRALVDAPDMIRCQMNFKRL 338
Query: 240 SLTDIKIDIKRVPKKTTLIKAMEEADVKTKWENSSWGKKLIVQKRRASLNDFDRFKVMLA 419
SLTDIKIDIKR+PKK TLIKAMEEADV T WENSSWGKKLIVQKRRASLNDFDRFKVMLA
Sbjct: 339 SLTDIKIDIKRIPKKATLIKAMEEADVXTXWENSSWGKKLIVQKRRASLNDFDRFKVMLA 518
Query: 420 KIKRGGAIRQELAKLKKASTA* 485
KIKRGGAIRQELAKLKK A*
Sbjct: 519 KIKRGGAIRQELAKLKKEVAA* 584
Score = 236 bits (509), Expect(2) = 1e-067
Identities = 110/142 (77%), Positives = 114/142 (80%)
Frame = -3 / -2
Query: 484 *AVDAFLSLASSCLIAPPLLIFASMTLNLSKSLSDALLFWTISFLPHELFSHLVFTSASS 305
*A +FLSLASSCLIAPPLLI A+MTLNLSKS SDALLF TISFLP ELFSH V TSASS
Sbjct: 583 *AATSFLSLASSCLIAPPLLILANMTLNLSKSFSDALLF*TISFLPQELFSHXVXTSASS 404
Query: 304 IALIRVVFLGTRLMSILMSVSESRLKFTWHLTISGASTSALFWXXXXXXXXXRP*SFP*F 125
+ALI+V FLG RLMSILMSVSE RLKF WHL ISGASTSA FW RP*S P*F
Sbjct: 403 MALIKVAFLGIRLMSILMSVSERRLKFIWHLIISGASTSARFWSTTSTMTTRRP*SLP*F 224
Query: 124 TRATRPISTNLLNGILAVAVAA 59
TRATRPISTNLLNGI A A A
Sbjct: 223 TRATRPISTNLLNGIFAAAATA 158
Score = 226 bits (488), Expect(2) = 2e-059
Identities = 96/146 (65%), Positives = 109/146 (74%)
Frame = -2 / -1
Query: 485 LSCGRLLKLGELLPDSTTPLNLRQHDFEPIKVIERCSPLLDNQXXXXXXXXXXXLHISFL 306
LS LL+LG+LL DSTTPLNL QHD EP+KVI+RCS LL+N+ HISFL
Sbjct: 584 LSSNLLLELGKLLSDSTTPLNLSQHDLEPVKVIQRCSSLLNNKLLAPGAVLPXGXHISFL 405
Query: 305 HRLDQGCLLGDTFDVNLDVSK*EPLEVHLAPDHIRGIHKCPVLVDHIDDDDETAIVLPVV 126
H LDQ CL GDT DVNLDV +*+ LEVHLAPDHIR + +CPVLVD +DDDDE A+VL VV
Sbjct: 404 HGLDQSCLFGDTLDVNLDVGQ*KTLEVHLAPDHIRSVDECPVLVDDVDDDDEAAVVLAVV 225
Query: 125 HQGHAPDLHEPLERHPRGGGGGAVKR 48
HQGH PDL EPLERH GG G +R
Sbjct: 224 HQGHPPDLDEPLERHLCGGCDGGEER 147
Score = 199 bits (430), Expect = 1e-050
Identities = 92/133 (69%), Positives = 101/133 (75%)
Frame = +2 / +2
Query: 74 REDAVQEVRGDRARGPGELREGLWPSRRHRRCGRPEQGTCGCP*YGQVPGELQAALTY*H 253
R+DAVQEVR DRA GPGELR+GL P RRHRR RPE GT *Y QVP ELQA+ T H
Sbjct: 173 RKDAVQEVRRDRAGGPGELRQGLRPPRRHRRRRRPEPGTRRRS*YDQVPDELQASFTDRH 352
Query: 254 QD*HQTCPQEDNPDQGDGGS*CEDQVGEQLMGQEADCPEEESIAQ*L**VQSHAGED*EG 433
QD*HQ PQ+ N DQG GGS*C + +GEQL+GQEA C EE+SIA+*L* VQ H G D*EG
Sbjct: 353 QD*HQAYPQKGNFDQGHGGS*CXNXMGEQLLGQEAYCSEEKSIAE*L*QVQGHVG*D*EG 532
Query: 434 WCYQARARQA*EG 472
WCYQ RA QA EG
Sbjct: 533 WCYQTRACQAQEG 571
Score = 90.0 bits (190), Expect(2) = 1e-027
Identities = 42/59 (71%), Positives = 45/59 (76%)
Frame = +1 / +1
Query: 310 KLM*RPSGRTAHGARS*LSRRGEHRSMTLIGSKSCWRRLRGVVLSGKSSPSLRRRPQLK 486
KLM +P GRTA GARS L RR EHR MTL GS+SCW RLRGVVLS KS PS RRR L+
Sbjct: 409 KLMXKPXGRTAPGARSLLFRREEHR*MTLTGSRSCWLRLRGVVLSDKSLPSSRRRLLLR 585
Score = 52.8 bits (109), Expect(2) = 1e-027
Identities = 30/50 (60%), Positives = 31/50 (62%)
Frame = +1 / +1
Query: 124 *TTGRTMAVXXXXXMWSTRTGHLWMPLIWSGAR*TSSGSHLLTSRLTSNV 273
*TT RT A STRTGH LI SGAR*TSS H TSRLTS+V
Sbjct: 223 *TTARTTAASSSSSTSSTRTGHSSTLLI*SGAR*TSSVFH*PTSRLTSSV 372
Score = 40.9 bits (83), Expect(2) = 1e-067
Identities = 17/32 (53%), Positives = 23/32 (71%)
Frame = -1 / -3
Query: 609 DKV*NGFTGNILVTLALTTLNRIADPTHNQKL 514
+K+*N F +++TLAL TL ADPT N+KL
Sbjct: 705 EKI*NSFLKTVVLTLALRTLEHRADPTWNKKL 610
Score = 24.4 bits (47), Expect(2) = 9e-082
Identities = 12/20 (60%), Positives = 15/20 (75%)
Frame = +2 / +2
Query: 515 SFWL*VGSAIRLSVVKARVT 574
SF VGSA+ SV+KARV+
Sbjct: 611 SFLFQVGSALCSSVLKARVS 670
Score = 23.1 bits (44), Expect(2) = 2e-059
Identities = 14/31 (45%), Positives = 19/31 (61%)
Frame = -2 / -1
Query: 605 KFEMGSQGTYW*LWL*QRSIELLIQLITKNS 513
++E+ S +*LWL*+ IQL TKNS
Sbjct: 701 RYEIVS*KQLY*LWL*EHWNIEQIQLGTKNS 609
>gb|BE193624.2|BE193624 HVSMEh0082A09f Hordeum vulgare 5-45 DAP spike EST library
HVcDNA0009 (5 to 45 DAP) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEh0082A09f, mRNA sequence
Length = 759
Score = 303 bits (655), Expect = 1e-081
Identities = 129/138 (93%), Positives = 133/138 (96%)
Frame = +3 / +2
Query: 69 ATARMPFKRFVEIGRVALVNYGKDYGRLVVIVDVVDQNRALVDAPDMVRCQVNFKRLSLT 248
A A+MPFKRFVEIGRVALVNYGKDYGRLVVIVDVVDQNRALVDAPDM+RCQ+NFKRLSLT
Sbjct: 26 AAAKMPFKRFVEIGRVALVNYGKDYGRLVVIVDVVDQNRALVDAPDMIRCQMNFKRLSLT 205
Query: 249 DIKIDIKRVPKKTTLIKAMEEADVKTKWENSSWGKKLIVQKRRASLNDFDRFKVMLAKIK 428
DIKIDIKR+PKK TLIKAMEEADVKTKWENSSWGKKLIVQKRRASLNDFDRFKVMLAKIK
Sbjct: 206 DIKIDIKRIPKKATLIKAMEEADVKTKWENSSWGKKLIVQKRRASLNDFDRFKVMLAKIK 385
Query: 429 RGGAIRQELAKLKKASTA 482
RGGAIRQELAKLKK A
Sbjct: 386 RGGAIRQELAKLKKEVAA 439
Score = 239 bits (517), Expect(2) = 6e-064
Identities = 111/139 (79%), Positives = 115/139 (82%)
Frame = -3 / -1
Query: 484 *AVDAFLSLASSCLIAPPLLIFASMTLNLSKSLSDALLFWTISFLPHELFSHLVFTSASS 305
*A +FLSLASSCLIAPPLLI A+MTLNLSKS SDALLF TISFLP ELFSHLVFTSASS
Sbjct: 441 *AATSFLSLASSCLIAPPLLILANMTLNLSKSFSDALLF*TISFLPQELFSHLVFTSASS 262
Query: 304 IALIRVVFLGTRLMSILMSVSESRLKFTWHLTISGASTSALFWXXXXXXXXXRP*SFP*F 125
+ALI+V FLG RLMSILMSVSE RLKF WHL ISGASTSA FW RP*S P*F
Sbjct: 261 MALIKVAFLGIRLMSILMSVSERRLKFIWHLIISGASTSARFWSTTSTMTTRRP*SLP*F 82
Query: 124 TRATRPISTNLLNGILAVA 68
TRATRPISTNLLNGI A A
Sbjct: 81 TRATRPISTNLLNGIFAAA 25
Score = 228 bits (492), Expect = 3e-059
Identities = 94/139 (67%), Positives = 107/139 (76%)
Frame = -2 / -3
Query: 485 LSCGRLLKLGELLPDSTTPLNLRQHDFEPIKVIERCSPLLDNQXXXXXXXXXXXLHISFL 306
+S LL+LG+LLPDSTTPLNL QHD EP+KVI+RCS LL+N+ HISFL
Sbjct: 442 ISSNLLLELGKLLPDSTTPLNLSQHDLEPVKVIQRCSSLLNNKLLAPGAVLPFGFHISFL 263
Query: 305 HRLDQGCLLGDTFDVNLDVSK*EPLEVHLAPDHIRGIHKCPVLVDHIDDDDETAIVLPVV 126
H LDQ CL GDT DVNLDVS+*+ LEVHLAPDHIR + +CPVLVD +DDDDE A+VL VV
Sbjct: 262 HGLDQSCLFGDTLDVNLDVSQ*KTLEVHLAPDHIRSVDECPVLVDDVDDDDEAAVVLAVV 83
Query: 125 HQGHAPDLHEPLERHPRGG 69
HQGH PDL EPLERH GG
Sbjct: 82 HQGHPPDLDEPLERHLCGG 26
Score = 211 bits (456), Expect = 3e-054
Identities = 97/135 (71%), Positives = 106/135 (78%)
Frame = +2 / +1
Query: 68 RHREDAVQEVRGDRARGPGELREGLWPSRRHRRCGRPEQGTCGCP*YGQVPGELQAALTY 247
R R+DAVQEVR DRA GPGELR+GL P RRHRR RPE GT *Y QVP ELQA+ T
Sbjct: 25 RRRKDAVQEVRRDRAGGPGELRQGLRPPRRHRRRRRPEPGTRRRS*YDQVPDELQASFTD 204
Query: 248 *HQD*HQTCPQEDNPDQGDGGS*CEDQVGEQLMGQEADCPEEESIAQ*L**VQSHAGED* 427
*HQD*HQ PQ+ N DQG GGS*CE+Q+GEQL+GQEA C EE+SIA+*L* VQ H G D*
Sbjct: 205 *HQD*HQAYPQKGNFDQGHGGS*CENQMGEQLLGQEAYCSEEKSIAE*L*QVQGHVG*D* 384
Query: 428 EGWCYQARARQA*EG 472
EGWCYQARA QA EG
Sbjct: 385 EGWCYQARACQAQEG 429
Score = 95.5 bits (202), Expect(2) = 4e-030
Identities = 43/55 (78%), Positives = 46/55 (83%)
Frame = +1 / +3
Query: 310 KLM*RPSGRTAHGARS*LSRRGEHRSMTLIGSKSCWRRLRGVVLSGKSSPSLRRR 474
KLM*+P+GRTA GARS L RR EHR MTL GS+SCW RLRGVVLSGKS PS RRR
Sbjct: 267 KLM*KPNGRTAPGARSLLFRREEHR*MTLTGSRSCWLRLRGVVLSGKSLPSSRRR 431
Score = 56.1 bits (116), Expect(2) = 4e-030
Identities = 31/50 (62%), Positives = 32/50 (64%)
Frame = +1 / +3
Query: 124 *TTGRTMAVXXXXXMWSTRTGHLWMPLIWSGAR*TSSGSHLLTSRLTSNV 273
*TT RT A STRTGH LI SGAR*TSS H LTSRLTS+V
Sbjct: 81 *TTARTTAASSSSSTSSTRTGHSSTLLI*SGAR*TSSVFH*LTSRLTSSV 230
Score = 24.9 bits (48), Expect(2) = 6e-064
Identities = 11/18 (61%), Positives = 12/18 (66%)
Frame = -1 / -2
Query: 567 LALTTLNRIADPTHNQKL 514
LAL TL DPT N+KL
Sbjct: 521 LALKTLEHKPDPTWNKKL 468
>gb|AJ460492.1|AJ460492 AJ460492 S00002 Hordeum vulgare subsp. vulgare cDNA clone
S0000200012D07F1, mRNA sequence
Length = 420
Score = 302 bits (654), Expect = 1e-081
Identities = 128/134 (95%), Positives = 132/134 (98%)
Frame = +3 / +2
Query: 69 ATARMPFKRFVEIGRVALVNYGKDYGRLVVIVDVVDQNRALVDAPDMVRCQVNFKRLSLT 248
A A+MPFKRFVEIGRVALVNYGKDYGRLVVIVDVVDQNRALVDAPDM+RCQ+NFKRLSLT
Sbjct: 8 AAAKMPFKRFVEIGRVALVNYGKDYGRLVVIVDVVDQNRALVDAPDMIRCQMNFKRLSLT 187
Query: 249 DIKIDIKRVPKKTTLIKAMEEADVKTKWENSSWGKKLIVQKRRASLNDFDRFKVMLAKIK 428
DIKIDIKR+PKK TLIKAMEEADVKTKWENSSWGKKLIVQKRRASLNDFDRFKVMLAKIK
Sbjct: 188 DIKIDIKRIPKKATLIKAMEEADVKTKWENSSWGKKLIVQKRRASLNDFDRFKVMLAKIK 367
Query: 429 RGGAIRQELAKLKK 470
RGGAIRQELAKLKK
Sbjct: 368 RGGAIRQELAKLKK 409
Score = 239 bits (516), Expect = 2e-062
Identities = 110/138 (79%), Positives = 114/138 (82%)
Frame = -3 / -1
Query: 481 AVDAFLSLASSCLIAPPLLIFASMTLNLSKSLSDALLFWTISFLPHELFSHLVFTSASSI 302
A +FLSLASSCLIAPPLLI A+MTLNLSKS SDALLF TISFLP ELFSHLVFTSASS+
Sbjct: 420 AATSFLSLASSCLIAPPLLILANMTLNLSKSFSDALLF*TISFLPQELFSHLVFTSASSM 241
Query: 301 ALIRVVFLGTRLMSILMSVSESRLKFTWHLTISGASTSALFWXXXXXXXXXRP*SFP*FT 122
ALI+V FLG RLMSILMSVSE RLKF WHL ISGASTSA FW RP*S P*FT
Sbjct: 240 ALIKVAFLGIRLMSILMSVSERRLKFIWHLIISGASTSARFWSTTSTMTTRRP*SLP*FT 61
Query: 121 RATRPISTNLLNGILAVA 68
RATRPISTNLLNGI A A
Sbjct: 60 RATRPISTNLLNGIFAAA 7
Score = 226 bits (489), Expect = 9e-059
Identities = 93/134 (69%), Positives = 105/134 (78%)
Frame = -2 / -3
Query: 470 LLKLGELLPDSTTPLNLRQHDFEPIKVIERCSPLLDNQXXXXXXXXXXXLHISFLHRLDQ 291
LL+LG+LLPDSTTPLNL QHD EP+KVI+RCS LL+N+ HISFLH LDQ
Sbjct: 409 LLELGKLLPDSTTPLNLSQHDLEPVKVIQRCSSLLNNKLLAPGAVLPFGFHISFLHGLDQ 230
Query: 290 GCLLGDTFDVNLDVSK*EPLEVHLAPDHIRGIHKCPVLVDHIDDDDETAIVLPVVHQGHA 111
CL GDT DVNLDVS+*+ LEVHLAPDHIR + +CPVLVD +DDDDE A+VL VVHQGH
Sbjct: 229 SCLFGDTLDVNLDVSQ*KTLEVHLAPDHIRSVDECPVLVDDVDDDDEAAVVLAVVHQGHP 50
Query: 110 PDLHEPLERHPRGG 69
PDL EPLERH GG
Sbjct: 49 PDLDEPLERHLCGG 8
Score = 211 bits (456), Expect = 3e-054
Identities = 97/135 (71%), Positives = 106/135 (78%)
Frame = +2 / +1
Query: 68 RHREDAVQEVRGDRARGPGELREGLWPSRRHRRCGRPEQGTCGCP*YGQVPGELQAALTY 247
R R+DAVQEVR DRA GPGELR+GL P RRHRR RPE GT *Y QVP ELQA+ T
Sbjct: 7 RRRKDAVQEVRRDRAGGPGELRQGLRPPRRHRRRRRPEPGTRRRS*YDQVPDELQASFTD 186
Query: 248 *HQD*HQTCPQEDNPDQGDGGS*CEDQVGEQLMGQEADCPEEESIAQ*L**VQSHAGED* 427
*HQD*HQ PQ+ N DQG GGS*CE+Q+GEQL+GQEA C EE+SIA+*L* VQ H G D*
Sbjct: 187 *HQD*HQAYPQKGNFDQGHGGS*CENQMGEQLLGQEAYCSEEKSIAE*L*QVQGHVG*D* 366
Query: 428 EGWCYQARARQA*EG 472
EGWCYQARA QA EG
Sbjct: 367 EGWCYQARACQAQEG 411
Score = 95.5 bits (202), Expect(2) = 4e-030
Identities = 43/55 (78%), Positives = 46/55 (83%)
Frame = +1 / +3
Query: 310 KLM*RPSGRTAHGARS*LSRRGEHRSMTLIGSKSCWRRLRGVVLSGKSSPSLRRR 474
KLM*+P+GRTA GARS L RR EHR MTL GS+SCW RLRGVVLSGKS PS RRR
Sbjct: 249 KLM*KPNGRTAPGARSLLFRREEHR*MTLTGSRSCWLRLRGVVLSGKSLPSSRRR 413
Score = 56.1 bits (116), Expect(2) = 4e-030
Identities = 31/50 (62%), Positives = 32/50 (64%)
Frame = +1 / +3
Query: 124 *TTGRTMAVXXXXXMWSTRTGHLWMPLIWSGAR*TSSGSHLLTSRLTSNV 273
*TT RT A STRTGH LI SGAR*TSS H LTSRLTS+V
Sbjct: 63 *TTARTTAASSSSSTSSTRTGHSSTLLI*SGAR*TSSVFH*LTSRLTSSV 212
>gb|BM100980.2|BM100980 EBpi01_SQ002_H24_R pistil, 1 DPA, no treatment, cv Optic, EBpi01
Hordeum vulgare subsp. vulgare cDNA clone
EBpi01_SQ002_H24 5', mRNA sequence
Length = 638
Score = 302 bits (654), Expect = 1e-081
Identities = 130/142 (91%), Positives = 135/142 (95%)
Frame = +3 / +2
Query: 60 AATATARMPFKRFVEIGRVALVNYGKDYGRLVVIVDVVDQNRALVDAPDMVRCQVNFKRL 239
AA A A+MPFKRFVEIGRVALVNYGKDYGRLVVIVDVVDQNRALVDAPDM+RCQ+NFKRL
Sbjct: 38 AAAAAAKMPFKRFVEIGRVALVNYGKDYGRLVVIVDVVDQNRALVDAPDMIRCQMNFKRL 217
Query: 240 SLTDIKIDIKRVPKKTTLIKAMEEADVKTKWENSSWGKKLIVQKRRASLNDFDRFKVMLA 419
SLTDIKIDIKR+PKK TLIKAMEEADVKTKWENSSWGKKLIVQKRRASLNDFDRFKVMLA
Sbjct: 218 SLTDIKIDIKRIPKKATLIKAMEEADVKTKWENSSWGKKLIVQKRRASLNDFDRFKVMLA 397
Query: 420 KIKRGGAIRQELAKLKKASTA* 485
KI+ GGAIRQELAKLKK A*
Sbjct: 398 KIRGGGAIRQELAKLKKEVAA* 463
Score = 240 bits (518), Expect = 9e-063
Identities = 112/142 (78%), Positives = 116/142 (81%)
Frame = -3 / -3
Query: 484 *AVDAFLSLASSCLIAPPLLIFASMTLNLSKSLSDALLFWTISFLPHELFSHLVFTSASS 305
*A +FLSLASSCLIAPP LI A+MTLNLSKS SDALLF TISFLP ELFSHLVFTSASS
Sbjct: 462 *AATSFLSLASSCLIAPPPLILANMTLNLSKSFSDALLF*TISFLPQELFSHLVFTSASS 283
Query: 304 IALIRVVFLGTRLMSILMSVSESRLKFTWHLTISGASTSALFWXXXXXXXXXRP*SFP*F 125
+ALI+V FLG RLMSILMSVSE RLKF WHL ISGASTSA FW RP*S P*F
Sbjct: 282 MALIKVAFLGIRLMSILMSVSERRLKFIWHLIISGASTSARFWSTTSTMTTRRP*SLP*F 103
Query: 124 TRATRPISTNLLNGILAVAVAA 59
TRATRPISTNLLNGI A A AA
Sbjct: 102 TRATRPISTNLLNGIFAAAAAA 37
Score = 230 bits (497), Expect = 7e-060
Identities = 96/146 (65%), Positives = 109/146 (74%)
Frame = -2 / -2
Query: 485 LSCGRLLKLGELLPDSTTPLNLRQHDFEPIKVIERCSPLLDNQXXXXXXXXXXXLHISFL 306
LS LL+LG+LLPDSTTP NL QHD EP+KVI+RCS LL+N+ HISFL
Sbjct: 463 LSSNLLLELGKLLPDSTTPSNLSQHDLEPVKVIQRCSSLLNNKLLAPGAVLPFGFHISFL 284
Query: 305 HRLDQGCLLGDTFDVNLDVSK*EPLEVHLAPDHIRGIHKCPVLVDHIDDDDETAIVLPVV 126
H LDQ CL GDT DVNLDV +*+ LEVHLAPDHIR + +CPVLVD +DDDDE A+VL VV
Sbjct: 283 HGLDQSCLFGDTLDVNLDVGQ*KTLEVHLAPDHIRSVDECPVLVDDVDDDDEAAVVLAVV 104
Query: 125 HQGHAPDLHEPLERHPRGGGGGAVKR 48
HQGH PDL EPLERH GG GG +R
Sbjct: 103 HQGHPPDLDEPLERHLCGGCGGGEER 26
Score = 207 bits (446), Expect = 7e-053
Identities = 97/140 (69%), Positives = 106/140 (75%)
Frame = +2 / +1
Query: 74 REDAVQEVRGDRARGPGELREGLWPSRRHRRCGRPEQGTCGCP*YGQVPGELQAALTY*H 253
R+DAVQEVR DRA GPGELR+GL P RRHRR RPE GT *Y QVP ELQA+ T H
Sbjct: 52 RKDAVQEVRRDRAGGPGELRQGLRPPRRHRRRRRPEPGTRRRS*YDQVPDELQASFTDRH 231
Query: 254 QD*HQTCPQEDNPDQGDGGS*CEDQVGEQLMGQEADCPEEESIAQ*L**VQSHAGED*EG 433
QD*HQ PQ+ N DQG GGS*CE+Q+GEQL+GQEA C EE+SIA+*L* VQ H G D* G
Sbjct: 232 QD*HQAYPQKGNFDQGHGGS*CENQMGEQLLGQEAYCSEEKSIAE*L*QVQGHVG*D*RG 411
Query: 434 WCYQARARQA*EGVHSLRSL 493
WCYQARA QA EG L SL
Sbjct: 412 WCYQARACQAQEGGCCLESL 471
Score = 93.6 bits (198), Expect(2) = 1e-028
Identities = 43/59 (72%), Positives = 47/59 (79%)
Frame = +1 / +3
Query: 310 KLM*RPSGRTAHGARS*LSRRGEHRSMTLIGSKSCWRRLRGVVLSGKSSPSLRRRPQLK 486
KLM*+P+GRTA GARS L RR EHR MTL GS+SCW RL GVVLSGKS PS RRR L+
Sbjct: 288 KLM*KPNGRTAPGARSLLFRREEHR*MTLTGSRSCWLRLEGVVLSGKSLPSSRRRLLLR 464
Score = 52.8 bits (109), Expect(2) = 1e-028
Identities = 30/50 (60%), Positives = 31/50 (62%)
Frame = +1 / +3
Query: 124 *TTGRTMAVXXXXXMWSTRTGHLWMPLIWSGAR*TSSGSHLLTSRLTSNV 273
*TT RT A STRTGH LI SGAR*TSS H TSRLTS+V
Sbjct: 102 *TTARTTAASSSSSTSSTRTGHSSTLLI*SGAR*TSSVFH*PTSRLTSSV 251
>gb|BJ463077.1|BJ463077 BJ463077 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags25k09 5', mRNA sequence
Length = 519
Score = 301 bits (652), Expect = 3e-081
Identities = 129/139 (92%), Positives = 133/139 (95%)
Frame = +3 / +3
Query: 69 ATARMPFKRFVEIGRVALVNYGKDYGRLVVIVDVVDQNRALVDAPDMVRCQVNFKRLSLT 248
A A+MPFKRFVEIGRVALVNYGKDYGRLVVIVDVVDQNRALVDAPDM+RCQ+NFKRLSLT
Sbjct: 27 AAAKMPFKRFVEIGRVALVNYGKDYGRLVVIVDVVDQNRALVDAPDMIRCQMNFKRLSLT 206
Query: 249 DIKIDIKRVPKKTTLIKAMEEADVKTKWENSSWGKKLIVQKRRASLNDFDRFKVMLAKIK 428
DIKIDIKR+PKK TLIKAMEEADVKTKWENSSWGKKLIVQKRRASLNDFDRFKVML KIK
Sbjct: 207 DIKIDIKRIPKKATLIKAMEEADVKTKWENSSWGKKLIVQKRRASLNDFDRFKVMLVKIK 386
Query: 429 RGGAIRQELAKLKKASTA* 485
RGGAIRQELAKLKK A*
Sbjct: 387 RGGAIRQELAKLKKEVAA* 443
Score = 237 bits (513), Expect = 4e-062
Identities = 110/139 (79%), Positives = 114/139 (82%)
Frame = -3 / -3
Query: 484 *AVDAFLSLASSCLIAPPLLIFASMTLNLSKSLSDALLFWTISFLPHELFSHLVFTSASS 305
*A +FLSLASSCLIAPPLLI +MTLNLSKS SDALLF TISFLP ELFSHLVFTSASS
Sbjct: 442 *AATSFLSLASSCLIAPPLLILTNMTLNLSKSFSDALLF*TISFLPQELFSHLVFTSASS 263
Query: 304 IALIRVVFLGTRLMSILMSVSESRLKFTWHLTISGASTSALFWXXXXXXXXXRP*SFP*F 125
+ALI+V FLG RLMSILMSVSE RLKF WHL ISGASTSA FW RP*S P*F
Sbjct: 262 MALIKVAFLGIRLMSILMSVSERRLKFIWHLIISGASTSARFWSTTSTMTTRRP*SLP*F 83
Query: 124 TRATRPISTNLLNGILAVA 68
TRATRPISTNLLNGI A A
Sbjct: 82 TRATRPISTNLLNGIFAAA 26
Score = 229 bits (495), Expect = 1e-059
Identities = 95/139 (68%), Positives = 107/139 (76%)
Frame = -2 / -2
Query: 485 LSCGRLLKLGELLPDSTTPLNLRQHDFEPIKVIERCSPLLDNQXXXXXXXXXXXLHISFL 306
LS LL+LG+LLPDSTTPLNL QHD EP+KVI+RCS LL+N+ HISFL
Sbjct: 443 LSSNLLLELGKLLPDSTTPLNLNQHDLEPVKVIQRCSSLLNNKLLAPGAVLPFGFHISFL 264
Query: 305 HRLDQGCLLGDTFDVNLDVSK*EPLEVHLAPDHIRGIHKCPVLVDHIDDDDETAIVLPVV 126
H LDQ CL GDT DVNLDVS+*+ LEVHLAPDHIR + +CPVLVD +DDDDE A+VL VV
Sbjct: 263 HGLDQSCLFGDTLDVNLDVSQ*KTLEVHLAPDHIRSVDECPVLVDDVDDDDEAAVVLAVV 84
Query: 125 HQGHAPDLHEPLERHPRGG 69
HQGH PDL EPLERH GG
Sbjct: 83 HQGHPPDLDEPLERHLCGG 27
Score = 211 bits (456), Expect = 3e-054
Identities = 97/135 (71%), Positives = 106/135 (78%)
Frame = +2 / +2
Query: 68 RHREDAVQEVRGDRARGPGELREGLWPSRRHRRCGRPEQGTCGCP*YGQVPGELQAALTY 247
R R+DAVQEVR DRA GPGELR+GL P RRHRR RPE GT *Y QVP ELQA+ T
Sbjct: 26 RRRKDAVQEVRRDRAGGPGELRQGLRPPRRHRRRRRPEPGTRRRS*YDQVPDELQASFTD 205
Query: 248 *HQD*HQTCPQEDNPDQGDGGS*CEDQVGEQLMGQEADCPEEESIAQ*L**VQSHAGED* 427
*HQD*HQ PQ+ N DQG GGS*CE+Q+GEQL+GQEA C EE+SIA+*L* VQ H G D*
Sbjct: 206 *HQD*HQAYPQKGNFDQGHGGS*CENQMGEQLLGQEAYCSEEKSIAE*L*QVQGHVG*D* 385
Query: 428 EGWCYQARARQA*EG 472
EGWCYQARA QA EG
Sbjct: 386 EGWCYQARACQAQEG 430
Score = 95.9 bits (203), Expect(2) = 3e-030
Identities = 44/59 (74%), Positives = 48/59 (81%)
Frame = +1 / +1
Query: 310 KLM*RPSGRTAHGARS*LSRRGEHRSMTLIGSKSCWRRLRGVVLSGKSSPSLRRRPQLK 486
KLM*+P+GRTA GARS L RR EHR MTL GS+SCW RLRGVVLSGKS PS RRR L+
Sbjct: 268 KLM*KPNGRTAPGARSLLFRREEHR*MTLTGSRSCWLRLRGVVLSGKSLPSSRRRLLLR 444
Score = 56.1 bits (116), Expect(2) = 3e-030
Identities = 31/50 (62%), Positives = 32/50 (64%)
Frame = +1 / +1
Query: 124 *TTGRTMAVXXXXXMWSTRTGHLWMPLIWSGAR*TSSGSHLLTSRLTSNV 273
*TT RT A STRTGH LI SGAR*TSS H LTSRLTS+V
Sbjct: 82 *TTARTTAASSSSSTSSTRTGHSSTLLI*SGAR*TSSVFH*LTSRLTSSV 231
>gb|BJ467579.1|BJ467579 BJ467579 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags25o09 3', mRNA sequence
Length = 523
Score = 301 bits (652), Expect = 3e-081
Identities = 129/139 (92%), Positives = 133/139 (95%)
Frame = +3 / -3
Query: 69 ATARMPFKRFVEIGRVALVNYGKDYGRLVVIVDVVDQNRALVDAPDMVRCQVNFKRLSLT 248
A A+MPFKRFVEIGRVALVNYGKDYGRLVVIVDVVDQNRALVDAPDM+RCQ+NFKRLSLT
Sbjct: 497 AAAKMPFKRFVEIGRVALVNYGKDYGRLVVIVDVVDQNRALVDAPDMIRCQMNFKRLSLT 318
Query: 249 DIKIDIKRVPKKTTLIKAMEEADVKTKWENSSWGKKLIVQKRRASLNDFDRFKVMLAKIK 428
DIKIDIKR+PKK TLIKAMEEADVKTKWENSSWGKKLIVQKRRASLNDFDRFKVML KIK
Sbjct: 317 DIKIDIKRIPKKATLIKAMEEADVKTKWENSSWGKKLIVQKRRASLNDFDRFKVMLVKIK 138
Query: 429 RGGAIRQELAKLKKASTA* 485
RGGAIRQELAKLKK A*
Sbjct: 137 RGGAIRQELAKLKKEVAA* 81
Score = 237 bits (513), Expect = 4e-062
Identities = 110/139 (79%), Positives = 114/139 (82%)
Frame = -3 / +1
Query: 484 *AVDAFLSLASSCLIAPPLLIFASMTLNLSKSLSDALLFWTISFLPHELFSHLVFTSASS 305
*A +FLSLASSCLIAPPLLI +MTLNLSKS SDALLF TISFLP ELFSHLVFTSASS
Sbjct: 82 *AATSFLSLASSCLIAPPLLILTNMTLNLSKSFSDALLF*TISFLPQELFSHLVFTSASS 261
Query: 304 IALIRVVFLGTRLMSILMSVSESRLKFTWHLTISGASTSALFWXXXXXXXXXRP*SFP*F 125
+ALI+V FLG RLMSILMSVSE RLKF WHL ISGASTSA FW RP*S P*F
Sbjct: 262 MALIKVAFLGIRLMSILMSVSERRLKFIWHLIISGASTSARFWSTTSTMTTRRP*SLP*F 441
Query: 124 TRATRPISTNLLNGILAVA 68
TRATRPISTNLLNGI A A
Sbjct: 442 TRATRPISTNLLNGIFAAA 498
Score = 229 bits (495), Expect = 1e-059
Identities = 95/139 (68%), Positives = 107/139 (76%)
Frame = -2 / +3
Query: 485 LSCGRLLKLGELLPDSTTPLNLRQHDFEPIKVIERCSPLLDNQXXXXXXXXXXXLHISFL 306
LS LL+LG+LLPDSTTPLNL QHD EP+KVI+RCS LL+N+ HISFL
Sbjct: 81 LSSNLLLELGKLLPDSTTPLNLNQHDLEPVKVIQRCSSLLNNKLLAPGAVLPFGFHISFL 260
Query: 305 HRLDQGCLLGDTFDVNLDVSK*EPLEVHLAPDHIRGIHKCPVLVDHIDDDDETAIVLPVV 126
H LDQ CL GDT DVNLDVS+*+ LEVHLAPDHIR + +CPVLVD +DDDDE A+VL VV
Sbjct: 261 HGLDQSCLFGDTLDVNLDVSQ*KTLEVHLAPDHIRSVDECPVLVDDVDDDDEAAVVLAVV 440
Query: 125 HQGHAPDLHEPLERHPRGG 69
HQGH PDL EPLERH GG
Sbjct: 441 HQGHPPDLDEPLERHLCGG 497
Score = 211 bits (456), Expect = 3e-054
Identities = 97/135 (71%), Positives = 106/135 (78%)
Frame = +2 / -2
Query: 68 RHREDAVQEVRGDRARGPGELREGLWPSRRHRRCGRPEQGTCGCP*YGQVPGELQAALTY 247
R R+DAVQEVR DRA GPGELR+GL P RRHRR RPE GT *Y QVP ELQA+ T
Sbjct: 498 RRRKDAVQEVRRDRAGGPGELRQGLRPPRRHRRRRRPEPGTRRRS*YDQVPDELQASFTD 319
Query: 248 *HQD*HQTCPQEDNPDQGDGGS*CEDQVGEQLMGQEADCPEEESIAQ*L**VQSHAGED* 427
*HQD*HQ PQ+ N DQG GGS*CE+Q+GEQL+GQEA C EE+SIA+*L* VQ H G D*
Sbjct: 318 *HQD*HQAYPQKGNFDQGHGGS*CENQMGEQLLGQEAYCSEEKSIAE*L*QVQGHVG*D* 139
Query: 428 EGWCYQARARQA*EG 472
EGWCYQARA QA EG
Sbjct: 138 EGWCYQARACQAQEG 94
Score = 95.9 bits (203), Expect(2) = 3e-030
Identities = 44/59 (74%), Positives = 48/59 (81%)
Frame = +1 / -1
Query: 310 KLM*RPSGRTAHGARS*LSRRGEHRSMTLIGSKSCWRRLRGVVLSGKSSPSLRRRPQLK 486
KLM*+P+GRTA GARS L RR EHR MTL GS+SCW RLRGVVLSGKS PS RRR L+
Sbjct: 256 KLM*KPNGRTAPGARSLLFRREEHR*MTLTGSRSCWLRLRGVVLSGKSLPSSRRRLLLR 80
Score = 56.1 bits (116), Expect(2) = 3e-030
Identities = 31/50 (62%), Positives = 32/50 (64%)
Frame = +1 / -1
Query: 124 *TTGRTMAVXXXXXMWSTRTGHLWMPLIWSGAR*TSSGSHLLTSRLTSNV 273
*TT RT A STRTGH LI SGAR*TSS H LTSRLTS+V
Sbjct: 442 *TTARTTAASSSSSTSSTRTGHSSTLLI*SGAR*TSSVFH*LTSRLTSSV 293
>gb|AW982785.3|AW982785 HVSMEg0004D09f Hordeum vulgare pre-anthesis spike EST library
HVcDNA0008 (white to yellow anther) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEg0004D09f, mRNA sequence
Length = 608
Score = 298 bits (646), Expect(2) = 4e-081
Identities = 127/138 (92%), Positives = 131/138 (94%)
Frame = +3 / +1
Query: 69 ATARMPFKRFVEIGRVALVNYGKDYGRLVVIVDVVDQNRALVDAPDMVRCQVNFKRLSLT 248
A A+MPFKRFVEIGRVALVNYGKDYGRLVVIVDVVDQNRALVDAPDM+RCQ+NFKRLSLT
Sbjct: 16 AAAKMPFKRFVEIGRVALVNYGKDYGRLVVIVDVVDQNRALVDAPDMIRCQMNFKRLSLT 195
Query: 249 DIKIDIKRVPKKTTLIKAMEEADVKTKWENSSWGKKLIVQKRRASLNDFDRFKVMLAKIK 428
DIKIDIKR+PKK TLIKAMEEADVKTKWENSSWGKKLIV KRRASLNDFDRFKVMLAKIK
Sbjct: 196 DIKIDIKRIPKKATLIKAMEEADVKTKWENSSWGKKLIVHKRRASLNDFDRFKVMLAKIK 375
Query: 429 RGGAIRQELAKLKKASTA 482
RGGAI QELAKLKK A
Sbjct: 376 RGGAIXQELAKLKKEGAA 429
Score = 234 bits (506), Expect(2) = 1e-065
Identities = 109/139 (78%), Positives = 113/139 (81%)
Frame = -3 / -1
Query: 484 *AVDAFLSLASSCLIAPPLLIFASMTLNLSKSLSDALLFWTISFLPHELFSHLVFTSASS 305
*A +FLSLASSC IAPPLLI A+MTLNLSKS SDALL TISFLP ELFSHLVFTSASS
Sbjct: 431 *AAPSFLSLASSCXIAPPLLILANMTLNLSKSFSDALLL*TISFLPQELFSHLVFTSASS 252
Query: 304 IALIRVVFLGTRLMSILMSVSESRLKFTWHLTISGASTSALFWXXXXXXXXXRP*SFP*F 125
+ALI+V FLG RLMSILMSVSE RLKF WHL ISGASTSA FW RP*S P*F
Sbjct: 251 MALIKVAFLGIRLMSILMSVSERRLKFIWHLIISGASTSARFWSTTSTMTTRRP*SLP*F 72
Query: 124 TRATRPISTNLLNGILAVA 68
TRATRPISTNLLNGI A A
Sbjct: 71 TRATRPISTNLLNGIFAAA 15
Score = 222 bits (480), Expect = 1e-057
Identities = 92/139 (66%), Positives = 106/139 (76%)
Frame = -2 / -3
Query: 485 LSCGRLLKLGELLPDSTTPLNLRQHDFEPIKVIERCSPLLDNQXXXXXXXXXXXLHISFL 306
+S L+LG+LL DSTTPLNL QHDFEP+KVI+RCS L++N+ HISFL
Sbjct: 432 ISSTLFLELGKLLXDSTTPLNLSQHDFEPVKVIQRCSSLVNNKLLAPGAVLPFGFHISFL 253
Query: 305 HRLDQGCLLGDTFDVNLDVSK*EPLEVHLAPDHIRGIHKCPVLVDHIDDDDETAIVLPVV 126
H LDQ CL GDT DVNLDVS+*+ LEVHLAPDHIR + +CPVLVD +DDDDE A+VL VV
Sbjct: 252 HGLDQSCLFGDTLDVNLDVSQ*KTLEVHLAPDHIRSVDECPVLVDDVDDDDEAAVVLAVV 73
Query: 125 HQGHAPDLHEPLERHPRGG 69
HQGH PDL EPLERH GG
Sbjct: 72 HQGHPPDLDEPLERHLCGG 16
Score = 206 bits (445), Expect = 1e-052
Identities = 95/134 (70%), Positives = 105/134 (78%)
Frame = +2 / +3
Query: 68 RHREDAVQEVRGDRARGPGELREGLWPSRRHRRCGRPEQGTCGCP*YGQVPGELQAALTY 247
R R+DAVQEVR DRA GPGELR+GL P RRHRR RPE GT *Y QVP ELQA+ T
Sbjct: 15 RRRKDAVQEVRRDRAGGPGELRQGLRPPRRHRRRRRPEPGTRRRS*YDQVPDELQASFTD 194
Query: 248 *HQD*HQTCPQEDNPDQGDGGS*CEDQVGEQLMGQEADCPEEESIAQ*L**VQSHAGED* 427
*HQD*HQ PQ+ N DQG GGS*CE+Q+GEQL+GQEA C +E+SIA+*L* VQSH G D*
Sbjct: 195 *HQD*HQAYPQKGNFDQGHGGS*CENQMGEQLLGQEAYCSQEKSIAE*L*QVQSHVG*D* 374
Query: 428 EGWCYQARARQA*E 469
EGWCY ARA QA E
Sbjct: 375 EGWCYXARACQAQE 416
Score = 89.5 bits (189), Expect(2) = 2e-028
Identities = 41/55 (74%), Positives = 44/55 (80%)
Frame = +1 / +2
Query: 310 KLM*RPSGRTAHGARS*LSRRGEHRSMTLIGSKSCWRRLRGVVLSGKSSPSLRRR 474
KLM*+P+GRTA GARS L R EHR MTL GSKSCW RLRGVVLS KS PS R+R
Sbjct: 257 KLM*KPNGRTAPGARSLLFTREEHR*MTLTGSKSCWLRLRGVVLSXKSLPSSRKR 421
Score = 56.1 bits (116), Expect(2) = 2e-028
Identities = 31/50 (62%), Positives = 32/50 (64%)
Frame = +1 / +2
Query: 124 *TTGRTMAVXXXXXMWSTRTGHLWMPLIWSGAR*TSSGSHLLTSRLTSNV 273
*TT RT A STRTGH LI SGAR*TSS H LTSRLTS+V
Sbjct: 71 *TTARTTAASSSSSTSSTRTGHSSTLLI*SGAR*TSSVFH*LTSRLTSSV 220
Score = 35.9 bits (72), Expect(2) = 1e-065
Identities = 16/33 (48%), Positives = 20/33 (60%)
Frame = -1 / -1
Query: 606 KV*NGFTGNILVTLALTTLNRIADPTHNQKL*H 508
K+*N F +++ LAL TL ADP QKL H
Sbjct: 551 KI*NSFLKTVVLPLALRTLEHRADPXWEQKLQH 453
Score = 23.1 bits (44), Expect(2) = 4e-081
Identities = 11/22 (50%), Positives = 16/22 (72%)
Frame = +2 / +1
Query: 503 MSC*SFWL*VGSAIRLSVVKAR 568
++C*SF GSA+ +V+KAR
Sbjct: 448 VAC*SFCSQXGSALCSNVLKAR 513
>gb|BF622414.3|BF622414 HVSMEa0004C23f Hordeum vulgare seedling shoot EST library
HVcDNA0001 (Cold stress) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEa0004C23f, mRNA sequence
Length = 478
Score = 299 bits (647), Expect = 1e-080
Identities = 129/139 (92%), Positives = 133/139 (95%)
Frame = +3 / +3
Query: 69 ATARMPFKRFVEIGRVALVNYGKDYGRLVVIVDVVDQNRALVDAPDMVRCQVNFKRLSLT 248
A A+MP KRFVEIGRVALVNYGKDYGRLVVIVDVVDQNRALVDAPDM+RCQ+NFKRLSLT
Sbjct: 24 AAAKMPGKRFVEIGRVALVNYGKDYGRLVVIVDVVDQNRALVDAPDMIRCQMNFKRLSLT 203
Query: 249 DIKIDIKRVPKKTTLIKAMEEADVKTKWENSSWGKKLIVQKRRASLNDFDRFKVMLAKIK 428
DIKIDIKR+PKK TLIKAMEEADVKTKWENSSWGKKLIVQKRRASLNDFDRFKVMLAKIK
Sbjct: 204 DIKIDIKRIPKKATLIKAMEEADVKTKWENSSWGKKLIVQKRRASLNDFDRFKVMLAKIK 383
Query: 429 RGGAIRQELAKLKKASTA* 485
RGGAIRQELAKLKK A*
Sbjct: 384 RGGAIRQELAKLKKEVAA* 440
Score = 236 bits (509), Expect = 1e-061
Identities = 110/139 (79%), Positives = 114/139 (82%)
Frame = -3 / -1
Query: 484 *AVDAFLSLASSCLIAPPLLIFASMTLNLSKSLSDALLFWTISFLPHELFSHLVFTSASS 305
*A +FLSLASSCLIAPPLLI A+MTLNLSKS SDALLF TISFLP ELFSHLVFTSASS
Sbjct: 439 *AATSFLSLASSCLIAPPLLILANMTLNLSKSFSDALLF*TISFLPQELFSHLVFTSASS 260
Query: 304 IALIRVVFLGTRLMSILMSVSESRLKFTWHLTISGASTSALFWXXXXXXXXXRP*SFP*F 125
+ALI+V FLG RLMSILMSVSE RLKF WHL ISGASTSA FW RP*S P*F
Sbjct: 259 MALIKVAFLGIRLMSILMSVSERRLKFIWHLIISGASTSARFWSTTSTMTTRRP*SLP*F 80
Query: 124 TRATRPISTNLLNGILAVA 68
TRATRPISTNLL GI A A
Sbjct: 79 TRATRPISTNLLPGIFAAA 23
Score = 224 bits (484), Expect = 4e-058
Identities = 93/139 (66%), Positives = 105/139 (75%)
Frame = -2 / -3
Query: 485 LSCGRLLKLGELLPDSTTPLNLRQHDFEPIKVIERCSPLLDNQXXXXXXXXXXXLHISFL 306
LS LL+LG+LLPDSTTPLNL QHD EP+KVI+RCS L+N+ HISFL
Sbjct: 440 LSSNLLLELGKLLPDSTTPLNLSQHDLEPVKVIQRCSSFLNNKLLAPGAVLPFGFHISFL 261
Query: 305 HRLDQGCLLGDTFDVNLDVSK*EPLEVHLAPDHIRGIHKCPVLVDHIDDDDETAIVLPVV 126
H LDQ CL GDT DVNLDVS+*+ LEVHLAPDHIR + +CPVLVD +DDDDE A+VL VV
Sbjct: 260 HGLDQSCLFGDTLDVNLDVSQ*KTLEVHLAPDHIRSVDECPVLVDDVDDDDEAAVVLAVV 81
Query: 125 HQGHAPDLHEPLERHPRGG 69
HQGH PDL EPL RH GG
Sbjct: 80 HQGHPPDLDEPLARHLCGG 24
Score = 205 bits (442), Expect = 3e-052
Identities = 96/142 (67%), Positives = 108/142 (76%)
Frame = +2 / +2
Query: 68 RHREDAVQEVRGDRARGPGELREGLWPSRRHRRCGRPEQGTCGCP*YGQVPGELQAALTY 247
R R+DA QEVR DRA GPGELR+GL P RRHRR RPE GT *Y QVP ELQA+ T
Sbjct: 23 RRRKDAGQEVRRDRAGGPGELRQGLRPPRRHRRRRRPEPGTRRRS*YDQVPDELQASFTD 202
Query: 248 *HQD*HQTCPQEDNPDQGDGGS*CEDQVGEQLMGQEADCPEEESIAQ*L**VQSHAGED* 427
*HQD*HQ PQ+ N DQG GGS*CE+Q+GEQL+GQEA C +++SIA+*L* VQ H G D*
Sbjct: 203 *HQD*HQAYPQKGNFDQGHGGS*CENQMGEQLLGQEAYCSKKKSIAE*L*QVQGHVG*D* 382
Query: 428 EGWCYQARARQA*EGVHSLRSL 493
EGWCYQARA QA EG L+ L
Sbjct: 383 EGWCYQARACQAQEGGCCLKYL 448
Score = 94.5 bits (200), Expect(2) = 7e-030
Identities = 43/59 (72%), Positives = 48/59 (81%)
Frame = +1 / +1
Query: 310 KLM*RPSGRTAHGARS*LSRRGEHRSMTLIGSKSCWRRLRGVVLSGKSSPSLRRRPQLK 486
KLM*+P+GRTA GARS L ++ EHR MTL GS+SCW RLRGVVLSGKS PS RRR LK
Sbjct: 265 KLM*KPNGRTAPGARSLLFKKEEHR*MTLTGSRSCWLRLRGVVLSGKSLPSSRRRLLLK 441
Score = 56.1 bits (116), Expect(2) = 7e-030
Identities = 31/50 (62%), Positives = 32/50 (64%)
Frame = +1 / +1
Query: 124 *TTGRTMAVXXXXXMWSTRTGHLWMPLIWSGAR*TSSGSHLLTSRLTSNV 273
*TT RT A STRTGH LI SGAR*TSS H LTSRLTS+V
Sbjct: 79 *TTARTTAASSSSSTSSTRTGHSSTLLI*SGAR*TSSVFH*LTSRLTSSV 228
>gb|BG344422.1|BG344422 HVSMEg0009D14f Hordeum vulgare pre-anthesis spike EST library
HVcDNA0008 (white to yellow anther) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEg0009D14f, mRNA sequence
Length = 811
Score = 298 bits (646), Expect = 2e-080
Identities = 126/135 (93%), Positives = 131/135 (97%)
Frame = +3 / +3
Query: 78 RMPFKRFVEIGRVALVNYGKDYGRLVVIVDVVDQNRALVDAPDMVRCQVNFKRLSLTDIK 257
+MPFKRFVEIGRVALVNYGKDYGRLVVIVDVVDQNRAL+DAPDM+RCQ+NFKRLSLTDIK
Sbjct: 30 KMPFKRFVEIGRVALVNYGKDYGRLVVIVDVVDQNRALIDAPDMIRCQMNFKRLSLTDIK 209
Query: 258 IDIKRVPKKTTLIKAMEEADVKTKWENSSWGKKLIVQKRRASLNDFDRFKVMLAKIKRGG 437
IDIKR+PKK TLIKAMEEADVKTKWENSSWGKKLIVQKRRASLNDFDRFKVMLAKIKRGG
Sbjct: 210 IDIKRIPKKATLIKAMEEADVKTKWENSSWGKKLIVQKRRASLNDFDRFKVMLAKIKRGG 389
Query: 438 AIRQELAKLKKASTA 482
AIRQELAKLKK A
Sbjct: 390 AIRQELAKLKKEVAA 434
Score = 244 bits (527), Expect = 5e-064
Identities = 111/135 (82%), Positives = 113/135 (83%)
Frame = -3 / -1
Query: 481 AVDAFLSLASSCLIAPPLLIFASMTLNLSKSLSDALLFWTISFLPHELFSHLVFTSASSI 302
A +FLS ASSCLIAPPLLI ASMTLNLSKSLSDALLFWTISFLPHELFSHLVFTSASSI
Sbjct: 433 AATSFLSFASSCLIAPPLLILASMTLNLSKSLSDALLFWTISFLPHELFSHLVFTSASSI 254
Query: 301 ALIRVVFLGTRLMSILMSVSESRLKFTWHLTISGASTSALFWXXXXXXXXXRP*SFP*FT 122
ALIRV FLG RLMSILMSV ESRLKF W +SGAS SALFW RP*S P*FT
Sbjct: 253 ALIRVAFLGIRLMSILMSVRESRLKFIWQRIMSGASISALFWSTTSTMTTRRP*SLP*FT 74
Query: 121 RATRPISTNLLNGIL 77
RATRPISTNLLNGIL
Sbjct: 73 RATRPISTNLLNGIL 29
Score = 215 bits (464), Expect = 2e-055
Identities = 91/139 (65%), Positives = 104/139 (74%)
Frame = -2 / -3
Query: 497 ERDSLSCGRLLKLGELLPDSTTPLNLRQHDFEPIKVIERCSPLLDNQXXXXXXXXXXXLH 318
+ D S LLKL LLPDS++PL+L +HD EP+KVIERC PLLDNQ LH
Sbjct: 449 QSDXSSGNLLLKLR*LLPDSSSPLDLGKHDLEPVKVIERCPPLLDNQLLAP*TVLPLGLH 270
Query: 317 ISFLHRLDQGCLLGDTFDVNLDVSK*EPLEVHLAPDHIRGIHKCPVLVDHIDDDDETAIV 138
ISFLH DQ CLL D DVNLDV + EPLEVHLA DH+R I+KCPVLVD++DDDDE A+V
Sbjct: 269 ISFLHSFDQSCLLRDPLDVNLDVGQGEPLEVHLAADHVRCINKCPVLVDNVDDDDEAAVV 90
Query: 137 LPVVHQGHAPDLHEPLERH 81
L VVHQGH PDLH+PLERH
Sbjct: 89 LAVVHQGHPPDLHKPLERH 33
Score = 195 bits (420), Expect = 3e-049
Identities = 92/132 (69%), Positives = 99/132 (75%)
Frame = +2 / +2
Query: 77 EDAVQEVRGDRARGPGELREGLWPSRRHRRCGRPEQGTCGCP*YGQVPGELQAALTY*HQ 256
++AVQEV GDRA GPGELR+GL P RRHRR RPEQGT C + +P ELQAAL HQ
Sbjct: 29 QNAVQEVCGDRAGGPGELRQGLRPPRRHRRRCRPEQGTY*CTGHDPLPDELQAALPDRHQ 208
Query: 257 D*HQTCPQEDNPDQGDGGS*CEDQVGEQLMGQEADCPEEESIAQ*L**VQSHAGED*EGW 436
D*HQ P E N DQ GGS*CEDQVGEQ MGQEADCPEEE IAQ*L* VQ HA +D EG
Sbjct: 209 D*HQADP*EGNSDQSYGGS*CEDQVGEQFMGQEADCPEEEGIAQ*L*QVQGHACQDQEGR 388
Query: 437 CYQARARQA*EG 472
YQA A +A*EG
Sbjct: 389 SYQAGASEA*EG 424
Score = 94.5 bits (200), Expect(2) = 9e-029
Identities = 46/62 (74%), Positives = 48/62 (77%)
Frame = +1 / +1
Query: 310 KLM*RPSGRTAHGARS*LSRRGEHRSMTLIGSKSCWRRLRGVVLSGKSSPSLRRRPQLKE 489
KLM*RPSGRT HGARS*LSRRG HRSMTL GS+SC R RG LSG+S SLRRR L
Sbjct: 262 KLM*RPSGRTVHGARS*LSRRGGHRSMTLTGSRSCLPRSRGEELSGRS*RSLRRRLPLLX 441
Query: 490 SL 495
SL
Sbjct: 442 SL 447
Score = 52.4 bits (108), Expect(2) = 9e-029
Identities = 29/49 (59%), Positives = 30/49 (61%)
Frame = +1 / +1
Query: 124 *TTGRTMAVXXXXXMWSTRTGHLWMPLIWSGAR*TSSGSHLLTSRLTSN 270
*TT RT A STRTGHL M S AR*TSSGS TSRLTS+
Sbjct: 76 *TTARTTAASSSSSTLSTRTGHLLMHRT*SAAR*TSSGSP*PTSRLTSS 222
>gb|AJ460382.1|AJ460382 AJ460382 S00002 Hordeum vulgare subsp. vulgare cDNA clone
S0000200032B11F1, mRNA sequence
Length = 480
Score = 298 bits (646), Expect = 2e-080
Identities = 126/135 (93%), Positives = 131/135 (97%)
Frame = +3 / +3
Query: 78 RMPFKRFVEIGRVALVNYGKDYGRLVVIVDVVDQNRALVDAPDMVRCQVNFKRLSLTDIK 257
+MPFKRFVEIGRVALVNYGKDYGRLVVIVDVVDQNRAL+DAPDM+RCQ+NFKRLSLTDIK
Sbjct: 21 KMPFKRFVEIGRVALVNYGKDYGRLVVIVDVVDQNRALIDAPDMIRCQMNFKRLSLTDIK 200
Query: 258 IDIKRVPKKTTLIKAMEEADVKTKWENSSWGKKLIVQKRRASLNDFDRFKVMLAKIKRGG 437
IDIKR+PKK TLIKAMEEADVKTKWENSSWGKKLIVQKRRASLNDFDRFKVMLAKIKRGG
Sbjct: 201 IDIKRIPKKATLIKAMEEADVKTKWENSSWGKKLIVQKRRASLNDFDRFKVMLAKIKRGG 380
Query: 438 AIRQELAKLKKASTA 482
AIRQELAKLKK A
Sbjct: 381 AIRQELAKLKKEVAA 425
Score = 244 bits (527), Expect = 5e-064
Identities = 111/135 (82%), Positives = 113/135 (83%)
Frame = -3 / -3
Query: 481 AVDAFLSLASSCLIAPPLLIFASMTLNLSKSLSDALLFWTISFLPHELFSHLVFTSASSI 302
A +FLS ASSCLIAPPLLI ASMTLNLSKSLSDALLFWTISFLPHELFSHLVFTSASSI
Sbjct: 424 AATSFLSFASSCLIAPPLLILASMTLNLSKSLSDALLFWTISFLPHELFSHLVFTSASSI 245
Query: 301 ALIRVVFLGTRLMSILMSVSESRLKFTWHLTISGASTSALFWXXXXXXXXXRP*SFP*FT 122
ALIRV FLG RLMSILMSV ESRLKF W +SGAS SALFW RP*S P*FT
Sbjct: 244 ALIRVAFLGIRLMSILMSVRESRLKFIWQRIMSGASISALFWSTTSTMTTRRP*SLP*FT 65
Query: 121 RATRPISTNLLNGIL 77
RATRPISTNLLNGIL
Sbjct: 64 RATRPISTNLLNGIL 20
Score = 214 bits (462), Expect = 5e-055
Identities = 91/139 (65%), Positives = 104/139 (74%)
Frame = -2 / -2
Query: 497 ERDSLSCGRLLKLGELLPDSTTPLNLRQHDFEPIKVIERCSPLLDNQXXXXXXXXXXXLH 318
+ D S LLKL LLPDS++PL+L +HD EP+KVIERC PLLDNQ LH
Sbjct: 440 QSDLSSGNLLLKLR*LLPDSSSPLDLGKHDLEPVKVIERCPPLLDNQLLAP*TVLPLGLH 261
Query: 317 ISFLHRLDQGCLLGDTFDVNLDVSK*EPLEVHLAPDHIRGIHKCPVLVDHIDDDDETAIV 138
ISFLH DQ CLL D DVNLDV + EPLEVHLA DH+R I+KCPVLVD++DDDDE A+V
Sbjct: 260 ISFLHSFDQSCLLRDPLDVNLDVGQGEPLEVHLAADHVRCINKCPVLVDNVDDDDEAAVV 81
Query: 137 LPVVHQGHAPDLHEPLERH 81
L VVHQGH PDLH+PLERH
Sbjct: 80 LAVVHQGHPPDLHKPLERH 24
Score = 195 bits (420), Expect = 3e-049
Identities = 92/132 (69%), Positives = 99/132 (75%)
Frame = +2 / +2
Query: 77 EDAVQEVRGDRARGPGELREGLWPSRRHRRCGRPEQGTCGCP*YGQVPGELQAALTY*HQ 256
++AVQEV GDRA GPGELR+GL P RRHRR RPEQGT C + +P ELQAAL HQ
Sbjct: 20 QNAVQEVCGDRAGGPGELRQGLRPPRRHRRRCRPEQGTY*CTGHDPLPDELQAALPDRHQ 199
Query: 257 D*HQTCPQEDNPDQGDGGS*CEDQVGEQLMGQEADCPEEESIAQ*L**VQSHAGED*EGW 436
D*HQ P E N DQ GGS*CEDQVGEQ MGQEADCPEEE IAQ*L* VQ HA +D EG
Sbjct: 200 D*HQADP*EGNSDQSYGGS*CEDQVGEQFMGQEADCPEEEGIAQ*L*QVQGHACQDQEGR 379
Query: 437 CYQARARQA*EG 472
YQA A +A*EG
Sbjct: 380 SYQAGASEA*EG 415
Score = 95.0 bits (201), Expect(2) = 6e-029
Identities = 46/62 (74%), Positives = 48/62 (77%)
Frame = +1 / +1
Query: 310 KLM*RPSGRTAHGARS*LSRRGEHRSMTLIGSKSCWRRLRGVVLSGKSSPSLRRRPQLKE 489
KLM*RPSGRT HGARS*LSRRG HRSMTL GS+SC R RG LSG+S SLRRR L
Sbjct: 253 KLM*RPSGRTVHGARS*LSRRGGHRSMTLTGSRSCLPRSRGEELSGRS*RSLRRRLPLLR 432
Query: 490 SL 495
SL
Sbjct: 433 SL 438
Score = 52.4 bits (108), Expect(2) = 6e-029
Identities = 29/49 (59%), Positives = 30/49 (61%)
Frame = +1 / +1
Query: 124 *TTGRTMAVXXXXXMWSTRTGHLWMPLIWSGAR*TSSGSHLLTSRLTSN 270
*TT RT A STRTGHL M S AR*TSSGS TSRLTS+
Sbjct: 67 *TTARTTAASSSSSTLSTRTGHLLMHRT*SAAR*TSSGSP*PTSRLTSS 213
>gb|BQ657133.1|BQ657133 HA09I10u HA Hordeum vulgare subsp. vulgare cDNA clone HA09I10
3-PRIME, mRNA sequence
Length = 605
Score = 298 bits (646), Expect = 2e-080
Identities = 128/147 (87%), Positives = 134/147 (91%)
Frame = +3 / +2
Query: 42 LQPLHRAATATARMPFKRFVEIGRVALVNYGKDYGRLVVIVDVVDQNRALVDAPDMVRCQ 221
L+ R + MPFKRFVEIGRVALVNYGKDYGRLVVIVDVVDQNRAL+DAPDM+RCQ
Sbjct: 38 LRRRRRRRPRSREMPFKRFVEIGRVALVNYGKDYGRLVVIVDVVDQNRALIDAPDMIRCQ 217
Query: 222 VNFKRLSLTDIKIDIKRVPKKTTLIKAMEEADVKTKWENSSWGKKLIVQKRRASLNDFDR 401
+NFKRLSLTDIKIDIKR+PKK TLIKAMEEADVKTKWENSSWGKKLIVQKRRASLNDFDR
Sbjct: 218 MNFKRLSLTDIKIDIKRIPKKATLIKAMEEADVKTKWENSSWGKKLIVQKRRASLNDFDR 397
Query: 402 FKVMLAKIKRGGAIRQELAKLKKASTA 482
FKVMLAKIKRGGAIRQELAKLKK A
Sbjct: 398 FKVMLAKIKRGGAIRQELAKLKKEVAA 478
Score = 242 bits (523), Expect = 2e-063
Identities = 110/134 (82%), Positives = 112/134 (83%)
Frame = -3 / -3
Query: 481 AVDAFLSLASSCLIAPPLLIFASMTLNLSKSLSDALLFWTISFLPHELFSHLVFTSASSI 302
A +FLS ASSCLIAPPLLI ASMTLNLSKSLSDALLFWTISFLPHELFSHLVFTSASSI
Sbjct: 477 AATSFLSFASSCLIAPPLLILASMTLNLSKSLSDALLFWTISFLPHELFSHLVFTSASSI 298
Query: 301 ALIRVVFLGTRLMSILMSVSESRLKFTWHLTISGASTSALFWXXXXXXXXXRP*SFP*FT 122
ALIRV FLG RLMSILMSV ESRLKF W +SGAS SALFW RP*S P*FT
Sbjct: 297 ALIRVAFLGIRLMSILMSVRESRLKFIWQRIMSGASISALFWSTTSTMTTRRP*SLP*FT 118
Query: 121 RATRPISTNLLNGI 80
RATRPISTNLLNGI
Sbjct: 117 RATRPISTNLLNGI 76
Score = 214 bits (462), Expect = 5e-055
Identities = 91/139 (65%), Positives = 104/139 (74%)
Frame = -2 / -2
Query: 497 ERDSLSCGRLLKLGELLPDSTTPLNLRQHDFEPIKVIERCSPLLDNQXXXXXXXXXXXLH 318
+ D S LLKL LLPDS++PL+L +HD EP+KVIERC PLLDNQ LH
Sbjct: 493 QSDLSSGNLLLKLR*LLPDSSSPLDLGKHDLEPVKVIERCPPLLDNQLLAP*TVLPLGLH 314
Query: 317 ISFLHRLDQGCLLGDTFDVNLDVSK*EPLEVHLAPDHIRGIHKCPVLVDHIDDDDETAIV 138
ISFLH DQ CLL D DVNLDV + EPLEVHLA DH+R I+KCPVLVD++DDDDE A+V
Sbjct: 313 ISFLHSFDQSCLLRDPLDVNLDVGQGEPLEVHLAADHVRCINKCPVLVDNVDDDDEAAVV 134
Query: 137 LPVVHQGHAPDLHEPLERH 81
L VVHQGH PDLH+PLERH
Sbjct: 133 LAVVHQGHPPDLHKPLERH 77
Score = 194 bits (418), Expect = 5e-049
Identities = 92/131 (70%), Positives = 98/131 (74%)
Frame = +2 / +1
Query: 80 DAVQEVRGDRARGPGELREGLWPSRRHRRCGRPEQGTCGCP*YGQVPGELQAALTY*HQD 259
+AVQEV GDRA GPGELR+GL P RRHRR RPEQGT C + +P ELQAAL HQD
Sbjct: 76 NAVQEVCGDRAGGPGELRQGLRPPRRHRRRCRPEQGTY*CTGHDPLPDELQAALPDRHQD 255
Query: 260 *HQTCPQEDNPDQGDGGS*CEDQVGEQLMGQEADCPEEESIAQ*L**VQSHAGED*EGWC 439
*HQ P E N DQ GGS*CEDQVGEQ MGQEADCPEEE IAQ*L* VQ HA +D EG
Sbjct: 256 *HQADP*EGNSDQSYGGS*CEDQVGEQFMGQEADCPEEEGIAQ*L*QVQGHACQDQEGRS 435
Query: 440 YQARARQA*EG 472
YQA A +A*EG
Sbjct: 436 YQAGASEA*EG 468
Score = 95.0 bits (201), Expect(2) = 6e-029
Identities = 46/62 (74%), Positives = 48/62 (77%)
Frame = +1 / +3
Query: 310 KLM*RPSGRTAHGARS*LSRRGEHRSMTLIGSKSCWRRLRGVVLSGKSSPSLRRRPQLKE 489
KLM*RPSGRT HGARS*LSRRG HRSMTL GS+SC R RG LSG+S SLRRR L
Sbjct: 306 KLM*RPSGRTVHGARS*LSRRGGHRSMTLTGSRSCLPRSRGEELSGRS*RSLRRRLPLLR 485
Query: 490 SL 495
SL
Sbjct: 486 SL 491
Score = 52.4 bits (108), Expect(2) = 6e-029
Identities = 29/49 (59%), Positives = 30/49 (61%)
Frame = +1 / +3
Query: 124 *TTGRTMAVXXXXXMWSTRTGHLWMPLIWSGAR*TSSGSHLLTSRLTSN 270
*TT RT A STRTGHL M S AR*TSSGS TSRLTS+
Sbjct: 120 *TTARTTAASSSSSTLSTRTGHLLMHRT*SAAR*TSSGSP*PTSRLTSS 266
>gb|BM377568.2|BM377568 EBem04_SQ003_I13_R embryo, 12 DPA, no treatment, cv Optic, EBem04
Hordeum vulgare subsp. vulgare cDNA clone
EBem04_SQ003_I13 5', mRNA sequence
Length = 591
Score = 298 bits (646), Expect = 2e-080
Identities = 128/147 (87%), Positives = 134/147 (91%)
Frame = +3 / +1
Query: 42 LQPLHRAATATARMPFKRFVEIGRVALVNYGKDYGRLVVIVDVVDQNRALVDAPDMVRCQ 221
L+ R + MPFKRFVEIGRVALVNYGKDYGRLVVIVDVVDQNRAL+DAPDM+RCQ
Sbjct: 37 LRRRRRRRPRSREMPFKRFVEIGRVALVNYGKDYGRLVVIVDVVDQNRALIDAPDMIRCQ 216
Query: 222 VNFKRLSLTDIKIDIKRVPKKTTLIKAMEEADVKTKWENSSWGKKLIVQKRRASLNDFDR 401
+NFKRLSLTDIKIDIKR+PKK TLIKAMEEADVKTKWENSSWGKKLIVQKRRASLNDFDR
Sbjct: 217 MNFKRLSLTDIKIDIKRIPKKATLIKAMEEADVKTKWENSSWGKKLIVQKRRASLNDFDR 396
Query: 402 FKVMLAKIKRGGAIRQELAKLKKASTA 482
FKVMLAKIKRGGAIRQELAKLKK A
Sbjct: 397 FKVMLAKIKRGGAIRQELAKLKKEVAA 477
Score = 242 bits (523), Expect = 2e-063
Identities = 110/134 (82%), Positives = 112/134 (83%)
Frame = -3 / -2
Query: 481 AVDAFLSLASSCLIAPPLLIFASMTLNLSKSLSDALLFWTISFLPHELFSHLVFTSASSI 302
A +FLS ASSCLIAPPLLI ASMTLNLSKSLSDALLFWTISFLPHELFSHLVFTSASSI
Sbjct: 476 AATSFLSFASSCLIAPPLLILASMTLNLSKSLSDALLFWTISFLPHELFSHLVFTSASSI 297
Query: 301 ALIRVVFLGTRLMSILMSVSESRLKFTWHLTISGASTSALFWXXXXXXXXXRP*SFP*FT 122
ALIRV FLG RLMSILMSV ESRLKF W +SGAS SALFW RP*S P*FT
Sbjct: 296 ALIRVAFLGIRLMSILMSVRESRLKFIWQRIMSGASISALFWSTTSTMTTRRP*SLP*FT 117
Query: 121 RATRPISTNLLNGI 80
RATRPISTNLLNGI
Sbjct: 116 RATRPISTNLLNGI 75
Score = 215 bits (464), Expect = 2e-055
Identities = 91/139 (65%), Positives = 104/139 (74%)
Frame = -2 / -1
Query: 497 ERDSLSCGRLLKLGELLPDSTTPLNLRQHDFEPIKVIERCSPLLDNQXXXXXXXXXXXLH 318
+ D S LLKL LLPDS++PL+L +HD EP+KVIERC PLLDNQ LH
Sbjct: 492 QSDXSSGNLLLKLR*LLPDSSSPLDLGKHDLEPVKVIERCPPLLDNQLLAP*TVLPLGLH 313
Query: 317 ISFLHRLDQGCLLGDTFDVNLDVSK*EPLEVHLAPDHIRGIHKCPVLVDHIDDDDETAIV 138
ISFLH DQ CLL D DVNLDV + EPLEVHLA DH+R I+KCPVLVD++DDDDE A+V
Sbjct: 312 ISFLHSFDQSCLLRDPLDVNLDVGQGEPLEVHLAADHVRCINKCPVLVDNVDDDDEAAVV 133
Query: 137 LPVVHQGHAPDLHEPLERH 81
L VVHQGH PDLH+PLERH
Sbjct: 132 LAVVHQGHPPDLHKPLERH 76
Score = 194 bits (418), Expect = 5e-049
Identities = 92/131 (70%), Positives = 98/131 (74%)
Frame = +2 / +3
Query: 80 DAVQEVRGDRARGPGELREGLWPSRRHRRCGRPEQGTCGCP*YGQVPGELQAALTY*HQD 259
+AVQEV GDRA GPGELR+GL P RRHRR RPEQGT C + +P ELQAAL HQD
Sbjct: 75 NAVQEVCGDRAGGPGELRQGLRPPRRHRRRCRPEQGTY*CTGHDPLPDELQAALPDRHQD 254
Query: 260 *HQTCPQEDNPDQGDGGS*CEDQVGEQLMGQEADCPEEESIAQ*L**VQSHAGED*EGWC 439
*HQ P E N DQ GGS*CEDQVGEQ MGQEADCPEEE IAQ*L* VQ HA +D EG
Sbjct: 255 *HQADP*EGNSDQSYGGS*CEDQVGEQFMGQEADCPEEEGIAQ*L*QVQGHACQDQEGRS 434
Query: 440 YQARARQA*EG 472
YQA A +A*EG
Sbjct: 435 YQAGASEA*EG 467
Score = 94.5 bits (200), Expect(2) = 9e-029
Identities = 46/62 (74%), Positives = 48/62 (77%)
Frame = +1 / +2
Query: 310 KLM*RPSGRTAHGARS*LSRRGEHRSMTLIGSKSCWRRLRGVVLSGKSSPSLRRRPQLKE 489
KLM*RPSGRT HGARS*LSRRG HRSMTL GS+SC R RG LSG+S SLRRR L
Sbjct: 305 KLM*RPSGRTVHGARS*LSRRGGHRSMTLTGSRSCLPRSRGEELSGRS*RSLRRRLPLLX 484
Query: 490 SL 495
SL
Sbjct: 485 SL 490
Score = 52.4 bits (108), Expect(2) = 9e-029
Identities = 29/49 (59%), Positives = 30/49 (61%)
Frame = +1 / +2
Query: 124 *TTGRTMAVXXXXXMWSTRTGHLWMPLIWSGAR*TSSGSHLLTSRLTSN 270
*TT RT A STRTGHL M S AR*TSSGS TSRLTS+
Sbjct: 119 *TTARTTAASSSSSTLSTRTGHLLMHRT*SAAR*TSSGSP*PTSRLTSS 265
>gb|BM376611.2|BM376611 EBem05_SQ002_L09_R embryo, 14 DPA, no treatment, cv Optic, EBem05
Hordeum vulgare subsp. vulgare cDNA clone
EBem05_SQ002_L09 5', mRNA sequence
Length = 581
Score = 298 bits (646), Expect = 2e-080
Identities = 128/147 (87%), Positives = 134/147 (91%)
Frame = +3 / +2
Query: 42 LQPLHRAATATARMPFKRFVEIGRVALVNYGKDYGRLVVIVDVVDQNRALVDAPDMVRCQ 221
L+ R + MPFKRFVEIGRVALVNYGKDYGRLVVIVDVVDQNRAL+DAPDM+RCQ
Sbjct: 32 LRRRRRRRPRSREMPFKRFVEIGRVALVNYGKDYGRLVVIVDVVDQNRALIDAPDMIRCQ 211
Query: 222 VNFKRLSLTDIKIDIKRVPKKTTLIKAMEEADVKTKWENSSWGKKLIVQKRRASLNDFDR 401
+NFKRLSLTDIKIDIKR+PKK TLIKAMEEADVKTKWENSSWGKKLIVQKRRASLNDFDR
Sbjct: 212 MNFKRLSLTDIKIDIKRIPKKATLIKAMEEADVKTKWENSSWGKKLIVQKRRASLNDFDR 391
Query: 402 FKVMLAKIKRGGAIRQELAKLKKASTA 482
FKVMLAKIKRGGAIRQELAKLKK A
Sbjct: 392 FKVMLAKIKRGGAIRQELAKLKKEVAA 472
Score = 242 bits (523), Expect = 2e-063
Identities = 110/134 (82%), Positives = 112/134 (83%)
Frame = -3 / -3
Query: 481 AVDAFLSLASSCLIAPPLLIFASMTLNLSKSLSDALLFWTISFLPHELFSHLVFTSASSI 302
A +FLS ASSCLIAPPLLI ASMTLNLSKSLSDALLFWTISFLPHELFSHLVFTSASSI
Sbjct: 471 AATSFLSFASSCLIAPPLLILASMTLNLSKSLSDALLFWTISFLPHELFSHLVFTSASSI 292
Query: 301 ALIRVVFLGTRLMSILMSVSESRLKFTWHLTISGASTSALFWXXXXXXXXXRP*SFP*FT 122
ALIRV FLG RLMSILMSV ESRLKF W +SGAS SALFW RP*S P*FT
Sbjct: 291 ALIRVAFLGIRLMSILMSVRESRLKFIWQRIMSGASISALFWSTTSTMTTRRP*SLP*FT 112
Query: 121 RATRPISTNLLNGI 80
RATRPISTNLLNGI
Sbjct: 111 RATRPISTNLLNGI 70
Score = 215 bits (464), Expect = 2e-055
Identities = 91/139 (65%), Positives = 104/139 (74%)
Frame = -2 / -2
Query: 497 ERDSLSCGRLLKLGELLPDSTTPLNLRQHDFEPIKVIERCSPLLDNQXXXXXXXXXXXLH 318
+ D S LLKL LLPDS++PL+L +HD EP+KVIERC PLLDNQ LH
Sbjct: 487 QSDXSSGNLLLKLR*LLPDSSSPLDLGKHDLEPVKVIERCPPLLDNQLLAP*TVLPLGLH 308
Query: 317 ISFLHRLDQGCLLGDTFDVNLDVSK*EPLEVHLAPDHIRGIHKCPVLVDHIDDDDETAIV 138
ISFLH DQ CLL D DVNLDV + EPLEVHLA DH+R I+KCPVLVD++DDDDE A+V
Sbjct: 307 ISFLHSFDQSCLLRDPLDVNLDVGQGEPLEVHLAADHVRCINKCPVLVDNVDDDDEAAVV 128
Query: 137 LPVVHQGHAPDLHEPLERH 81
L VVHQGH PDLH+PLERH
Sbjct: 127 LAVVHQGHPPDLHKPLERH 71
Score = 194 bits (418), Expect = 5e-049
Identities = 92/131 (70%), Positives = 98/131 (74%)
Frame = +2 / +1
Query: 80 DAVQEVRGDRARGPGELREGLWPSRRHRRCGRPEQGTCGCP*YGQVPGELQAALTY*HQD 259
+AVQEV GDRA GPGELR+GL P RRHRR RPEQGT C + +P ELQAAL HQD
Sbjct: 70 NAVQEVCGDRAGGPGELRQGLRPPRRHRRRCRPEQGTY*CTGHDPLPDELQAALPDRHQD 249
Query: 260 *HQTCPQEDNPDQGDGGS*CEDQVGEQLMGQEADCPEEESIAQ*L**VQSHAGED*EGWC 439
*HQ P E N DQ GGS*CEDQVGEQ MGQEADCPEEE IAQ*L* VQ HA +D EG
Sbjct: 250 *HQADP*EGNSDQSYGGS*CEDQVGEQFMGQEADCPEEEGIAQ*L*QVQGHACQDQEGRS 429
Query: 440 YQARARQA*EG 472
YQA A +A*EG
Sbjct: 430 YQAGASEA*EG 462
Score = 94.5 bits (200), Expect(2) = 9e-029
Identities = 46/62 (74%), Positives = 48/62 (77%)
Frame = +1 / +3
Query: 310 KLM*RPSGRTAHGARS*LSRRGEHRSMTLIGSKSCWRRLRGVVLSGKSSPSLRRRPQLKE 489
KLM*RPSGRT HGARS*LSRRG HRSMTL GS+SC R RG LSG+S SLRRR L
Sbjct: 300 KLM*RPSGRTVHGARS*LSRRGGHRSMTLTGSRSCLPRSRGEELSGRS*RSLRRRLPLLX 479
Query: 490 SL 495
SL
Sbjct: 480 SL 485
Score = 52.4 bits (108), Expect(2) = 9e-029
Identities = 29/49 (59%), Positives = 30/49 (61%)
Frame = +1 / +3
Query: 124 *TTGRTMAVXXXXXMWSTRTGHLWMPLIWSGAR*TSSGSHLLTSRLTSN 270
*TT RT A STRTGHL M S AR*TSSGS TSRLTS+
Sbjct: 114 *TTARTTAASSSSSTLSTRTGHLLMHRT*SAAR*TSSGSP*PTSRLTSS 260
>gb|BI780084.2|BI780084 EBma08_SQ001_F19_R maternal, 28 DPA, no treatment, cv Optic, EBma08
Hordeum vulgare subsp. vulgare cDNA clone
EBma08_SQ001_F19 5', mRNA sequence
Length = 595
Score = 298 bits (646), Expect = 2e-080
Identities = 128/147 (87%), Positives = 134/147 (91%)
Frame = +3 / +3
Query: 42 LQPLHRAATATARMPFKRFVEIGRVALVNYGKDYGRLVVIVDVVDQNRALVDAPDMVRCQ 221
L+ R + MPFKRFVEIGRVALVNYGKDYGRLVVIVDVVDQNRAL+DAPDM+RCQ
Sbjct: 42 LRRRRRRRPRSREMPFKRFVEIGRVALVNYGKDYGRLVVIVDVVDQNRALIDAPDMIRCQ 221
Query: 222 VNFKRLSLTDIKIDIKRVPKKTTLIKAMEEADVKTKWENSSWGKKLIVQKRRASLNDFDR 401
+NFKRLSLTDIKIDIKR+PKK TLIKAMEEADVKTKWENSSWGKKLIVQKRRASLNDFDR
Sbjct: 222 MNFKRLSLTDIKIDIKRIPKKATLIKAMEEADVKTKWENSSWGKKLIVQKRRASLNDFDR 401
Query: 402 FKVMLAKIKRGGAIRQELAKLKKASTA 482
FKVMLAKIKRGGAIRQELAKLKK A
Sbjct: 402 FKVMLAKIKRGGAIRQELAKLKKEVAA 482
Score = 242 bits (523), Expect = 2e-063
Identities = 110/134 (82%), Positives = 112/134 (83%)
Frame = -3 / -1
Query: 481 AVDAFLSLASSCLIAPPLLIFASMTLNLSKSLSDALLFWTISFLPHELFSHLVFTSASSI 302
A +FLS ASSCLIAPPLLI ASMTLNLSKSLSDALLFWTISFLPHELFSHLVFTSASSI
Sbjct: 481 AATSFLSFASSCLIAPPLLILASMTLNLSKSLSDALLFWTISFLPHELFSHLVFTSASSI 302
Query: 301 ALIRVVFLGTRLMSILMSVSESRLKFTWHLTISGASTSALFWXXXXXXXXXRP*SFP*FT 122
ALIRV FLG RLMSILMSV ESRLKF W +SGAS SALFW RP*S P*FT
Sbjct: 301 ALIRVAFLGIRLMSILMSVRESRLKFIWQRIMSGASISALFWSTTSTMTTRRP*SLP*FT 122
Query: 121 RATRPISTNLLNGI 80
RATRPISTNLLNGI
Sbjct: 121 RATRPISTNLLNGI 80
Score = 214 bits (462), Expect = 5e-055
Identities = 91/139 (65%), Positives = 104/139 (74%)
Frame = -2 / -3
Query: 497 ERDSLSCGRLLKLGELLPDSTTPLNLRQHDFEPIKVIERCSPLLDNQXXXXXXXXXXXLH 318
+ D S LLKL LLPDS++PL+L +HD EP+KVIERC PLLDNQ LH
Sbjct: 497 QSDLSSGNLLLKLR*LLPDSSSPLDLGKHDLEPVKVIERCPPLLDNQLLAP*TVLPLGLH 318
Query: 317 ISFLHRLDQGCLLGDTFDVNLDVSK*EPLEVHLAPDHIRGIHKCPVLVDHIDDDDETAIV 138
ISFLH DQ CLL D DVNLDV + EPLEVHLA DH+R I+KCPVLVD++DDDDE A+V
Sbjct: 317 ISFLHSFDQSCLLRDPLDVNLDVGQGEPLEVHLAADHVRCINKCPVLVDNVDDDDEAAVV 138
Query: 137 LPVVHQGHAPDLHEPLERH 81
L VVHQGH PDLH+PLERH
Sbjct: 137 LAVVHQGHPPDLHKPLERH 81
Score = 194 bits (418), Expect = 5e-049
Identities = 92/131 (70%), Positives = 98/131 (74%)
Frame = +2 / +2
Query: 80 DAVQEVRGDRARGPGELREGLWPSRRHRRCGRPEQGTCGCP*YGQVPGELQAALTY*HQD 259
+AVQEV GDRA GPGELR+GL P RRHRR RPEQGT C + +P ELQAAL HQD
Sbjct: 80 NAVQEVCGDRAGGPGELRQGLRPPRRHRRRCRPEQGTY*CTGHDPLPDELQAALPDRHQD 259
Query: 260 *HQTCPQEDNPDQGDGGS*CEDQVGEQLMGQEADCPEEESIAQ*L**VQSHAGED*EGWC 439
*HQ P E N DQ GGS*CEDQVGEQ MGQEADCPEEE IAQ*L* VQ HA +D EG
Sbjct: 260 *HQADP*EGNSDQSYGGS*CEDQVGEQFMGQEADCPEEEGIAQ*L*QVQGHACQDQEGRS 439
Query: 440 YQARARQA*EG 472
YQA A +A*EG
Sbjct: 440 YQAGASEA*EG 472
Score = 95.0 bits (201), Expect(2) = 6e-029
Identities = 46/62 (74%), Positives = 48/62 (77%)
Frame = +1 / +1
Query: 310 KLM*RPSGRTAHGARS*LSRRGEHRSMTLIGSKSCWRRLRGVVLSGKSSPSLRRRPQLKE 489
KLM*RPSGRT HGARS*LSRRG HRSMTL GS+SC R RG LSG+S SLRRR L
Sbjct: 310 KLM*RPSGRTVHGARS*LSRRGGHRSMTLTGSRSCLPRSRGEELSGRS*RSLRRRLPLLR 489
Query: 490 SL 495
SL
Sbjct: 490 SL 495
Score = 52.4 bits (108), Expect(2) = 6e-029
Identities = 29/49 (59%), Positives = 30/49 (61%)
Frame = +1 / +1
Query: 124 *TTGRTMAVXXXXXMWSTRTGHLWMPLIWSGAR*TSSGSHLLTSRLTSN 270
*TT RT A STRTGHL M S AR*TSSGS TSRLTS+
Sbjct: 124 *TTARTTAASSSSSTLSTRTGHLLMHRT*SAAR*TSSGSP*PTSRLTSS 270
>gb|BM370559.2|BM370559 EBro08_SQ004_J13_R root, 3 week, drought-stressed, cv Optic, EBro08
Hordeum vulgare subsp. vulgare cDNA clone
EBro08_SQ004_J13 5', mRNA sequence
Length = 595
Score = 298 bits (646), Expect = 2e-080
Identities = 128/147 (87%), Positives = 134/147 (91%)
Frame = +3 / +1
Query: 42 LQPLHRAATATARMPFKRFVEIGRVALVNYGKDYGRLVVIVDVVDQNRALVDAPDMVRCQ 221
L+ R + MPFKRFVEIGRVALVNYGKDYGRLVVIVDVVDQNRAL+DAPDM+RCQ
Sbjct: 37 LRRRRRRRPRSREMPFKRFVEIGRVALVNYGKDYGRLVVIVDVVDQNRALIDAPDMIRCQ 216
Query: 222 VNFKRLSLTDIKIDIKRVPKKTTLIKAMEEADVKTKWENSSWGKKLIVQKRRASLNDFDR 401
+NFKRLSLTDIKIDIKR+PKK TLIKAMEEADVKTKWENSSWGKKLIVQKRRASLNDFDR
Sbjct: 217 MNFKRLSLTDIKIDIKRIPKKATLIKAMEEADVKTKWENSSWGKKLIVQKRRASLNDFDR 396
Query: 402 FKVMLAKIKRGGAIRQELAKLKKASTA 482
FKVMLAKIKRGGAIRQELAKLKK A
Sbjct: 397 FKVMLAKIKRGGAIRQELAKLKKEVAA 477
Score = 242 bits (523), Expect = 2e-063
Identities = 110/134 (82%), Positives = 112/134 (83%)
Frame = -3 / -3
Query: 481 AVDAFLSLASSCLIAPPLLIFASMTLNLSKSLSDALLFWTISFLPHELFSHLVFTSASSI 302
A +FLS ASSCLIAPPLLI ASMTLNLSKSLSDALLFWTISFLPHELFSHLVFTSASSI
Sbjct: 476 AATSFLSFASSCLIAPPLLILASMTLNLSKSLSDALLFWTISFLPHELFSHLVFTSASSI 297
Query: 301 ALIRVVFLGTRLMSILMSVSESRLKFTWHLTISGASTSALFWXXXXXXXXXRP*SFP*FT 122
ALIRV FLG RLMSILMSV ESRLKF W +SGAS SALFW RP*S P*FT
Sbjct: 296 ALIRVAFLGIRLMSILMSVRESRLKFIWQRIMSGASISALFWSTTSTMTTRRP*SLP*FT 117
Query: 121 RATRPISTNLLNGI 80
RATRPISTNLLNGI
Sbjct: 116 RATRPISTNLLNGI 75
Score = 214 bits (462), Expect = 5e-055
Identities = 91/139 (65%), Positives = 104/139 (74%)
Frame = -2 / -2
Query: 497 ERDSLSCGRLLKLGELLPDSTTPLNLRQHDFEPIKVIERCSPLLDNQXXXXXXXXXXXLH 318
+ D S LLKL LLPDS++PL+L +HD EP+KVIERC PLLDNQ LH
Sbjct: 492 QSDLSSGNLLLKLR*LLPDSSSPLDLGKHDLEPVKVIERCPPLLDNQLLAP*TVLPLGLH 313
Query: 317 ISFLHRLDQGCLLGDTFDVNLDVSK*EPLEVHLAPDHIRGIHKCPVLVDHIDDDDETAIV 138
ISFLH DQ CLL D DVNLDV + EPLEVHLA DH+R I+KCPVLVD++DDDDE A+V
Sbjct: 312 ISFLHSFDQSCLLRDPLDVNLDVGQGEPLEVHLAADHVRCINKCPVLVDNVDDDDEAAVV 133
Query: 137 LPVVHQGHAPDLHEPLERH 81
L VVHQGH PDLH+PLERH
Sbjct: 132 LAVVHQGHPPDLHKPLERH 76
Score = 194 bits (418), Expect = 5e-049
Identities = 92/131 (70%), Positives = 98/131 (74%)
Frame = +2 / +3
Query: 80 DAVQEVRGDRARGPGELREGLWPSRRHRRCGRPEQGTCGCP*YGQVPGELQAALTY*HQD 259
+AVQEV GDRA GPGELR+GL P RRHRR RPEQGT C + +P ELQAAL HQD
Sbjct: 75 NAVQEVCGDRAGGPGELRQGLRPPRRHRRRCRPEQGTY*CTGHDPLPDELQAALPDRHQD 254
Query: 260 *HQTCPQEDNPDQGDGGS*CEDQVGEQLMGQEADCPEEESIAQ*L**VQSHAGED*EGWC 439
*HQ P E N DQ GGS*CEDQVGEQ MGQEADCPEEE IAQ*L* VQ HA +D EG
Sbjct: 255 *HQADP*EGNSDQSYGGS*CEDQVGEQFMGQEADCPEEEGIAQ*L*QVQGHACQDQEGRS 434
Query: 440 YQARARQA*EG 472
YQA A +A*EG
Sbjct: 435 YQAGASEA*EG 467
Score = 95.0 bits (201), Expect(2) = 6e-029
Identities = 46/62 (74%), Positives = 48/62 (77%)
Frame = +1 / +2
Query: 310 KLM*RPSGRTAHGARS*LSRRGEHRSMTLIGSKSCWRRLRGVVLSGKSSPSLRRRPQLKE 489
KLM*RPSGRT HGARS*LSRRG HRSMTL GS+SC R RG LSG+S SLRRR L
Sbjct: 305 KLM*RPSGRTVHGARS*LSRRGGHRSMTLTGSRSCLPRSRGEELSGRS*RSLRRRLPLLR 484
Query: 490 SL 495
SL
Sbjct: 485 SL 490
Score = 52.4 bits (108), Expect(2) = 6e-029
Identities = 29/49 (59%), Positives = 30/49 (61%)
Frame = +1 / +2
Query: 124 *TTGRTMAVXXXXXMWSTRTGHLWMPLIWSGAR*TSSGSHLLTSRLTSN 270
*TT RT A STRTGHL M S AR*TSSGS TSRLTS+
Sbjct: 119 *TTARTTAASSSSSTLSTRTGHLLMHRT*SAAR*TSSGSP*PTSRLTSS 265
Database: Hordeum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:16 PM
Number of letters in database: 175,134,539
Number of sequences in database: 312,970
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 337,973,617
Number of Sequences: 312970
Number of extensions: 4951346
Number of successful extensions: 51437
Number of sequences better than 1.0e-020: 207
length of database: 58,378,179
effective HSP length: 52
effective length of database: 42,103,739
effective search space used: 8968096407
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)