TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 1738931.2.11
(609 letters)
Database: Hordeum_nucl_with_EST.fasta
312,970 sequences; 175,134,539 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BF630835.3|BF630835 HVSMEb0014D02f Hordeum vulgare seedl... 241 3e-063
gb|AW982157.3|AW982157 HVSMEg0002A21f Hordeum vulgare pre-a... 240 6e-063
gb|BE455946.3|BE455946 HVSMEg0017N08f Hordeum vulgare pre-a... 240 6e-063
gb|BQ458327.1|BQ458327 HA05J02r HA Hordeum vulgare subsp. v... 240 6e-063
gb|BQ459875.1|BQ459875 HA07N07r HA Hordeum vulgare subsp. v... 240 6e-063
gb|BQ460346.1|BQ460346 HA09P16r HA Hordeum vulgare subsp. v... 240 6e-063
gb|BQ657029.1|BQ657029 HA09P16u HA Hordeum vulgare subsp. v... 240 6e-063
gb|BU985175.1|BU985175 HF06F15r HF Hordeum vulgare subsp. v... 240 6e-063
gb|BU988656.1|BU988656 HF18E24r HF Hordeum vulgare subsp. v... 240 6e-063
gb|BU994595.1|BU994595 HM07J04r HM Hordeum vulgare subsp. v... 240 6e-063
gb|BU998633.1|BU998633 HI11L01r HI Hordeum vulgare subsp. v... 240 6e-063
gb|CB880123.1|CB880123 HM05J04w HM Hordeum vulgare subsp. v... 240 6e-063
gb|CK125679.1|CK125679 BES1824110a14 BES1824 Hordeum vulgar... 240 6e-063
gb|BM377717.2|BM377717 EBem04_SQ004_A02_R embryo, 12 DPA, n... 239 8e-063
gb|BU976460.1|BU976460 HA03M06r HA Hordeum vulgare subsp. v... 238 2e-062
gb|BI777726.2|BI777726 EBro08_SQ001_K06_R root, 3 week, dro... 236 8e-062
gb|BQ761674.1|BQ761674 EBem10_SQ001_C13_R embryo, 2 Day ger... 236 8e-062
gb|BU995255.1|BU995255 HM09K24r HM Hordeum vulgare subsp. v... 236 8e-062
gb|CA021690.1|CA021690 HZ40N02r HZ Hordeum vulgare subsp. v... 236 8e-062
gb|CA028156.1|CA028156 HZ61C15r HZ Hordeum vulgare subsp. v... 236 8e-062
gb|BM375980.2|BM375980 EBem06_SQ004_P12_R embryo, 21 DPA, n... 234 4e-061
gb|CB881396.1|CB881396 HM09K24w HM Hordeum vulgare subsp. v... 230 5e-060
gb|BU980716.1|BU980716 HA21H15r HA Hordeum vulgare subsp. v... 227 3e-059
gb|BE231184.1|BE231184 HVSMEg0017G24f Hordeum vulgare pre-a... 226 6e-059
gb|CV063157.1|CV063157 BNEL87c12 Barley EST endosperm libra... 155 1e-058
gb|AV917188.1|AV917188 AV917188 K. Sato unpublished cDNA li... 209 2e-057
gb|BF629878.1|BF629878 HVSMEb0007D03f Hordeum vulgare seedl... 215 1e-055
gb|AL501922.1|AL501922 AL501922 Hordeum vulgare Barke roots... 215 2e-055
gb|AL504623.1|AL504623 AL504623 Hordeum vulgare Barke roots... 215 2e-055
gb|AL504947.1|AL504947 AL504947 Hordeum vulgare Barke roots... 215 2e-055
gb|AL505546.1|AL505546 AL505546 Hordeum vulgare Barke roots... 215 2e-055
gb|AL507504.1|AL507504 AL507504 Hordeum vulgare Barke devel... 215 2e-055
gb|BG368539.1|BG368539 HVSMEi0019J01f Hordeum vulgare 20 DA... 215 2e-055
gb|BE215694.1|BE215694 HV_CEb0008D21f Hordeum vulgare seedl... 215 2e-055
gb|BE230981.2|BE230981 HVSMEg0015F14f Hordeum vulgare pre-a... 215 2e-055
gb|BF627231.3|BF627231 HVSMEb0004E20f Hordeum vulgare seedl... 215 2e-055
gb|BG300119.2|BG300119 HVSMEb0010C12f Hordeum vulgare seedl... 215 2e-055
gb|BF630877.3|BF630877 HVSMEb0014E22f Hordeum vulgare seedl... 215 2e-055
gb|BF260619.3|BF260619 HVSMEf0022H22f Hordeum vulgare seedl... 215 2e-055
gb|BE060628.3|BE060628 HVSMEg0012N02f Hordeum vulgare pre-a... 215 2e-055
gb|BG344853.2|BG344853 HVSMEg0016G20f Hordeum vulgare pre-a... 215 2e-055
gb|BE455617.3|BE455617 HVSMEg0018D20f Hordeum vulgare pre-a... 215 2e-055
gb|BE196465.3|BE196465 HVSMEh0092F22f Hordeum vulgare 5-45 ... 215 2e-055
gb|AV915397.1|AV915397 AV915397 K. Sato unpublished cDNA li... 215 2e-055
gb|AV919065.1|AV919065 AV919065 K. Sato unpublished cDNA li... 215 2e-055
gb|AV919098.1|AV919098 AV919098 K. Sato unpublished cDNA li... 215 2e-055
gb|AV920486.1|AV920486 AV920486 K. Sato unpublished cDNA li... 215 2e-055
gb|BM444065.1|BM444065 EBem09_SQ004_B03_R embryo, 1 Day ger... 215 2e-055
gb|BJ452851.1|BJ452851 BJ452851 K. Sato unpublished cDNA li... 215 2e-055
gb|BJ455186.1|BJ455186 BJ455186 K. Sato unpublished cDNA li... 215 2e-055
gb|BJ460399.1|BJ460399 BJ460399 K. Sato unpublished cDNA li... 215 2e-055
gb|BJ464777.1|BJ464777 BJ464777 K. Sato unpublished cDNA li... 215 2e-055
gb|BJ466280.1|BJ466280 BJ466280 K. Sato unpublished cDNA li... 215 2e-055
gb|BJ467320.1|BJ467320 BJ467320 K. Sato unpublished cDNA li... 215 2e-055
gb|BJ468268.1|BJ468268 BJ468268 K. Sato unpublished cDNA li... 215 2e-055
gb|BJ468337.1|BJ468337 BJ468337 K. Sato unpublished cDNA li... 215 2e-055
gb|BJ468338.1|BJ468338 BJ468338 K. Sato unpublished cDNA li... 215 2e-055
gb|BJ468341.1|BJ468341 BJ468341 K. Sato unpublished cDNA li... 215 2e-055
gb|BQ458309.1|BQ458309 HA05J22r HA Hordeum vulgare subsp. v... 215 2e-055
gb|BM368346.2|BM368346 EBed01_SQ002_O06_R endosperm, 6 DPA,... 215 2e-055
gb|BM441033.2|BM441033 EBed02_SQ002_D15_R endosperm, 8 DPA,... 215 2e-055
gb|BM377604.2|BM377604 EBem04_SQ003_K06_R embryo, 12 DPA, n... 215 2e-055
gb|BM376466.2|BM376466 EBem05_SQ002_E12_R embryo, 14 DPA, n... 215 2e-055
gb|BM375405.2|BM375405 EBem06_SQ003_E02_R embryo, 21 DPA, n... 215 2e-055
gb|BM368997.2|BM368997 EBem07_SQ002_D22_R embryo, 28 DPA, n... 215 2e-055
gb|BM099140.2|BM099140 EBes01_SQ002_F13_R embryo sac, 4-6 D... 215 2e-055
gb|BM100706.2|BM100706 EBma01_SQ005_P24_R maternal, 4 DPA, ... 215 2e-055
gb|BI781031.2|BI781031 EBma03_SQ001_D09_R maternal, 8 DPA, ... 215 2e-055
gb|BM373034.2|BM373034 EBma04_SQ002_N07_R maternal, 10 DPA,... 215 2e-055
gb|BM374225.2|BM374225 EBpi03_SQ003_A08_R pistil, 4 DPA, no... 215 2e-055
gb|BI776744.2|BI776744 EBpi07_SQ001_J24_R pistil, 12 DPA, n... 215 2e-055
gb|BM097257.2|BM097257 EBpi07_SQ002_O09_R pistil, 12 DPA, n... 215 2e-055
gb|BI779605.2|BI779605 EBro01_SQ004_I23_R root, 3 week, hyd... 215 2e-055
gb|BM372167.2|BM372167 EBro03_SQ004_D09_R root, 3 week, wat... 215 2e-055
gb|BI778408.2|BI778408 EBro07_SQ003_D13_R root, 3 week, red... 215 2e-055
gb|BM370231.2|BM370231 EBro08_SQ003_G23_R root, 3 week, dro... 215 2e-055
gb|BQ762310.1|BQ762310 EBro01_SQ005_N10_R root, 3 week, hyd... 215 2e-055
gb|BQ765354.1|BQ765354 EBro03_SQ006_N20_R root, 3 week, wat... 215 2e-055
gb|BQ766365.1|BQ766365 EBro08_SQ005_D21_R root, 3 week, dro... 215 2e-055
gb|BQ768827.1|BQ768827 EBro08_SQ012_D24_R root, 3 week, dro... 215 2e-055
gb|BU970292.1|BU970292 HB14D11r BC Hordeum vulgare subsp. v... 215 2e-055
gb|BU973820.1|BU973820 HB26B04r BC Hordeum vulgare subsp. v... 215 2e-055
gb|BU976551.1|BU976551 HA03O09r HA Hordeum vulgare subsp. v... 215 2e-055
gb|BU978546.1|BU978546 HA13I22r HA Hordeum vulgare subsp. v... 215 2e-055
gb|BU979605.1|BU979605 HA16L04r HA Hordeum vulgare subsp. v... 215 2e-055
gb|BU979684.1|BU979684 HA16O23r HA Hordeum vulgare subsp. v... 215 2e-055
gb|BU981909.1|BU981909 HA24P16r HA Hordeum vulgare subsp. v... 215 2e-055
gb|BU983560.1|BU983560 HA30C11r HA Hordeum vulgare subsp. v... 215 2e-055
gb|BU983644.1|BU983644 HA30H06r HA Hordeum vulgare subsp. v... 215 2e-055
gb|BU983718.1|BU983718 HA30M11r HA Hordeum vulgare subsp. v... 215 2e-055
gb|BU984285.1|BU984285 HF03I03r HF Hordeum vulgare subsp. v... 215 2e-055
gb|BU985291.1|BU985291 HF06L04r HF Hordeum vulgare subsp. v... 215 2e-055
gb|BU986491.1|BU986491 HF12A10r HF Hordeum vulgare subsp. v... 215 2e-055
gb|BU987926.1|BU987926 HF16C15r HF Hordeum vulgare subsp. v... 215 2e-055
gb|BU989071.1|BU989071 HF19K22r HF Hordeum vulgare subsp. v... 215 2e-055
gb|BU996300.1|BU996300 HM13C20r HM Hordeum vulgare subsp. v... 215 2e-055
gb|CA023665.1|CA023665 HZ47A02r HZ Hordeum vulgare subsp. v... 215 2e-055
gb|CA025223.1|CA025223 HZ51J01r HZ Hordeum vulgare subsp. v... 215 2e-055
gb|CA032899.1|CA032899 HX14I08r HX Hordeum vulgare subsp. v... 215 2e-055
gb|CB874442.1|CB874442 HX05E13w HX Hordeum vulgare subsp. v... 215 2e-055
gb|CB876292.1|CB876292 HX10N16w HX Hordeum vulgare subsp. v... 215 2e-055
gb|CV054992.1|CV054992 BNEL115f10 Barley EST endosperm libr... 215 2e-055
gb|CV056483.1|CV056483 BNEL18C12 Barley EST endosperm libra... 215 2e-055
gb|CV056574.1|CV056574 BNEL19C6 Barley EST endosperm librar... 215 2e-055
gb|CV058764.1|CV058764 BNEL40f2 Barley EST endosperm librar... 215 2e-055
gb|CV061282.1|CV061282 BNEL67a3 Barley EST endosperm librar... 215 2e-055
gb|CV061425.1|CV061425 BNEL68f9 Barley EST endosperm librar... 215 2e-055
gb|CV061478.1|CV061478 BNEL69d10 Barley EST endosperm libra... 215 2e-055
gb|CV061600.1|CV061600 BNEL6G5 Barley EST endosperm library... 215 2e-055
gb|CV061625.1|CV061625 BNEL70a8 Barley EST endosperm librar... 215 2e-055
gb|CK122498.1|CK122498 BES1824103l04 BES1824 Hordeum vulgar... 215 2e-055
gb|CK123126.1|CK123126 BES1824102d14 BES1824 Hordeum vulgar... 215 2e-055
gb|CK123486.1|CK123486 BES1824104d01 BES1824 Hordeum vulgar... 215 2e-055
gb|CK123491.1|CK123491 BES1824104d06 BES1824 Hordeum vulgar... 215 2e-055
gb|CK123502.1|CK123502 BES1824104d17 BES1824 Hordeum vulgar... 215 2e-055
gb|CK123728.1|CK123728 BES1824105d07 BES1824 Hordeum vulgar... 215 2e-055
gb|CK124068.1|CK124068 BES1824106o04 BES1824 Hordeum vulgar... 215 2e-055
gb|CK124971.1|CK124971 BES1824111A2e04 BES1824 Hordeum vulg... 215 2e-055
gb|BF262669.3|BF262669 HV_CEa0004J22f Hordeum vulgare seedl... 215 2e-055
gb|BQ459454.1|BQ459454 HA01A05r HA Hordeum vulgare subsp. v... 215 2e-055
gb|BI776429.2|BI776429 EBpi05_SQ001_E17_R pistil, 8 DPA, no... 215 2e-055
gb|CK125666.1|CK125666 BES1824109k13 BES1824 Hordeum vulgar... 214 3e-055
gb|CK123434.1|CK123434 BES1824104a18 BES1824 Hordeum vulgar... 213 6e-055
gb|BG299886.2|BG299886 HVSMEa0022F13f Hordeum vulgare seedl... 213 8e-055
gb|BM097576.2|BM097576 EBem04_SQ002_B14_R embryo, 12 DPA, n... 211 2e-054
gb|CA028695.1|CA028695 HZ62P10r HZ Hordeum vulgare subsp. v... 211 2e-054
gb|BM373121.2|BM373121 EBma04_SQ003_D01_R maternal, 10 DPA,... 211 3e-054
gb|BU984060.1|BU984060 HA31N22r HA Hordeum vulgare subsp. v... 211 3e-054
gb|CA026283.1|CA026283 HZ55H09r HZ Hordeum vulgare subsp. v... 210 4e-054
gb|CB883219.1|CB883219 HQ01J03w HQ Hordeum vulgare subsp. v... 210 4e-054
gb|AV914063.1|AV914063 AV914063 K. Sato unpublished cDNA li... 210 6e-054
gb|BQ656993.1|BQ656993 HA01C03u HA Hordeum vulgare subsp. v... 210 8e-054
gb|BM370989.2|BM370989 EBro04_SQ003_C11_R root, 3 week, sal... 210 8e-054
gb|BM097966.2|BM097966 EBpi03_SQ002_C20_R pistil, 4 DPA, no... 199 1e-053
gb|BE196149.3|BE196149 HVSMEh0091H23f Hordeum vulgare 5-45 ... 209 1e-053
gb|CV061626.1|CV061626 BNEL70a9 Barley EST endosperm librar... 208 2e-053
gb|BF258603.2|BF258603 HVSMEf0016C24f Hordeum vulgare seedl... 208 3e-053
gb|BQ658124.1|BQ658124 HA05J22u HA Hordeum vulgare subsp. v... 207 4e-053
gb|BG299941.1|BG299941 HVSMEa0022J15f Hordeum vulgare seedl... 207 5e-053
gb|AW982321.2|AW982321 HVSMEg0002O07f Hordeum vulgare pre-a... 207 5e-053
gb|CV060443.1|CV060443 BNEL58b8 Barley EST endosperm librar... 205 1e-052
gb|BU976959.1|BU976959 HA10J18r HA Hordeum vulgare subsp. v... 205 2e-052
gb|CV060767.1|CV060767 BNEL61a1 Barley EST endosperm librar... 204 3e-052
gb|BM098773.2|BM098773 EBpi05_SQ002_A07_R pistil, 8 DPA, no... 204 5e-052
gb|AL509687.1|AL509687 AL509687 Hordeum vulgare Barke devel... 201 2e-051
gb|BE454486.3|BE454486 HVSMEh0094K06f Hordeum vulgare 5-45 ... 199 1e-050
gb|BU976552.1|BU976552 HA03O09u HA Hordeum vulgare subsp. v... 199 1e-050
gb|AV916880.1|AV916880 AV916880 K. Sato unpublished cDNA li... 179 2e-050
gb|BU999626.1|BU999626 HI15C10r HI Hordeum vulgare subsp. v... 190 3e-050
gb|BE231309.2|BE231309 HVSMEg0019M15f Hordeum vulgare pre-a... 123 3e-050
gb|BQ763341.1|BQ763341 EBro02_SQ008_D01_R root, 3 week, hyd... 188 3e-050
gb|BI779272.2|BI779272 EBro01_SQ003_I09_R root, 3 week, hyd... 117 5e-049
gb|CA031488.1|CA031488 HX10C09r HX Hordeum vulgare subsp. v... 185 7e-049
gb|AV915821.1|AV915821 AV915821 K. Sato unpublished cDNA li... 192 2e-048
gb|BG344575.2|BG344575 HVSMEg0009L03f Hordeum vulgare pre-a... 191 3e-048
gb|BU978670.1|BU978670 HA13P02r HA Hordeum vulgare subsp. v... 191 3e-048
gb|BI947076.1|BI947076 HVSMEl0003I22f Hordeum vulgare spike... 191 3e-048
gb|AV922177.1|AV922177 AV922177 K. Sato unpublished cDNA li... 190 7e-048
gb|BU976960.1|BU976960 HA10J18u HA Hordeum vulgare subsp. v... 189 9e-048
gb|BM444405.1|BM444405 EBem09_SQ005_C01_R embryo, 1 Day ger... 185 2e-046
gb|CK122133.1|CK122133 BES1824101j09 BES1824 Hordeum vulgar... 185 2e-046
gb|BM368496.2|BM368496 EBem08_SQ002_I08_R embryo, 40 DPA, n... 184 4e-046
gb|BG418310.2|BG418310 HVSMEk0022E03f Hordeum vulgare testa... 117 7e-046
gb|BF262661.3|BF262661 HV_CEa0004J14f Hordeum vulgare seedl... 182 1e-045
gb|BM444493.1|BM444493 EBem09_SQ005_G19_R embryo, 1 Day ger... 148 2e-045
gb|BF254388.3|BF254388 HVSMEf0003N18f Hordeum vulgare seedl... 181 3e-045
gb|BM374670.1|BM374670 EBma05_SQ002_G13_R maternal, 12 DPA,... 181 4e-045
gb|BM442845.2|BM442845 EBro02_SQ001_I11_R root, 3 week, hyd... 178 2e-044
gb|BF257185.3|BF257185 HVSMEf0012B23f Hordeum vulgare seedl... 177 5e-044
gb|BQ658141.1|BQ658141 HA05J02u HA Hordeum vulgare subsp. v... 177 5e-044
gb|BM442951.2|BM442951 EBro02_SQ002_A06_R root, 3 week, hyd... 177 7e-044
gb|BQ657021.1|BQ657021 HA01A05u HA Hordeum vulgare subsp. v... 174 3e-043
gb|BI947075.1|BI947075 HVSMEl0003I20f Hordeum vulgare spike... 127 4e-043
gb|BM370449.2|BM370449 EBro08_SQ004_E06_R root, 3 week, dro... 165 3e-040
gb|BQ464445.1|BQ464445 HF02E22r HF Hordeum vulgare subsp. v... 164 5e-040
gb|BQ657580.1|BQ657580 HA07N07u HA Hordeum vulgare subsp. v... 160 6e-039
gb|AL502816.1|AL502816 AL502816 Hordeum vulgare Barke roots... 141 2e-038
gb|AJ462889.1|AJ462889 AJ462889 S00002 Hordeum vulgare subs... 155 1e-037
gb|AL510792.1|AL510792 AL510792 Hordeum vulgare Barke devel... 153 1e-036
gb|BI776470.2|BI776470 EBpi05_SQ001_H18_R pistil, 8 DPA, no... 147 6e-035
gb|BI777419.2|BI777419 EBro04_SQ001_C18_R root, 3 week, sal... 147 6e-035
gb|BQ765634.1|BQ765634 EBro03_SQ007_A22_R root, 3 week, wat... 142 1e-033
gb|CV054940.1|CV054940 BNEL115a12 Barley EST endosperm libr... 103 2e-033
gb|BI960788.1|BI960788 HVSMEk0019K19f Hordeum vulgare testa... 135 2e-031
gb|BE060676.3|BE060676 HVSMEg0012P06f Hordeum vulgare pre-a... 133 1e-030
gb|BF259751.1|BF259751 HVSMEf0020C16f Hordeum vulgare seedl... 131 3e-030
gb|BQ757333.1|BQ757333 EBem10_SQ003_M01_R embryo, 2 Day ger... 131 3e-030
gb|AJ460095.1|AJ460095 AJ460095 S00002 Hordeum vulgare subs... 130 8e-030
gb|BM373753.2|BM373753 EBma03_SQ002_J06_R maternal, 8 DPA, ... 128 3e-029
gb|CA022798.1|CA022798 HZ44G05r HZ Hordeum vulgare subsp. v... 122 2e-027
gb|BQ459869.1|BQ459869 HA07N13r HA Hordeum vulgare subsp. v... 112 4e-024
gb|BQ657570.1|BQ657570 HA07N13u HA Hordeum vulgare subsp. v... 112 4e-024
gb|BF258772.2|BF258772 HVSMEf0016K05f Hordeum vulgare seedl... 110 9e-024
gb|BQ464090.1|BQ464090 HF01F07T HF Hordeum vulgare subsp. v... 105 2e-022
gb|BJ465167.1|BJ465167 BJ465167 K. Sato unpublished cDNA li... 103 8e-022
gb|BQ656658.1|BQ656658 HA02K14u HA Hordeum vulgare subsp. v... 102 2e-021
>gb|BF630835.3|BF630835 HVSMEb0014D02f Hordeum vulgare seedling shoot EST library
HVcDNA0002 (Dehydration stress) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEb0014D02f, mRNA sequence
Length = 581
Score = 241 bits (520), Expect = 3e-063
Identities = 106/146 (72%), Positives = 117/146 (80%)
Frame = +2 / +2
Query: 59 MSQGKGGASRKEEVVTREYTINLHKRLHGCTFKKKAPNAIKEIRKFAQKAMGTTDVRIDV 238
M+ KGGA RKEEVVTREYT+NLHKRLHGCTFKKKAPNAIKE+RKFAQKAMGTTDVRIDV
Sbjct: 59 MADKKGGAPRKEEVVTREYTVNLHKRLHGCTFKKKAPNAIKELRKFAQKAMGTTDVRIDV 238
Query: 239 KLNKHIWSSGIXXXXXXXXXXXXXXXNDEEDAKEELYSLVTVAEIPAEGLKGLGTKVVDE 418
KLNK IWSSGI NDEEDAKEELYSLVTVAE+PAEGLKGLGTKVVD+
Sbjct: 239 KLNKLIWSSGIRSVPRRVRVRIARRRNDEEDAKEELYSLVTVAEVPAEGLKGLGTKVVDD 418
Query: 419 TD*AVAFSTSLESS*FVFATAKPFVS 496
T+* ++ ST LE + + T+ FVS
Sbjct: 419 TE*TLSLSTLLE*AVILHCTSMXFVS 496
Score = 141 bits (302), Expect = 4e-033
Identities = 64/135 (47%), Positives = 78/135 (57%)
Frame = -3 / -2
Query: 508 KNFLGYKRFCCCKYKLGTL*RCGERDSLIGFVNDLGPQPFQALGRDLRDGDKGVEFLLGI 329
K GYK + *+C R SL+ ++DLG QP Q L R L +GD+ VE LLG+
Sbjct: 508 KTSAGYKXHAGAMQNNSSF*QCR*RKSLLSVIDDLGSQPLQTLSRHLGNGDE*VELLLGV 329
Query: 328 LLIVPLAGDPHTNPPRHXXXXXXXDVLVELHIDPDVRGAHGLLCKLPDLLDGVGXXXXXX 149
LL++P AG+PH NP H D LVELH+DPDV AH LLCKLP+L DG+G
Sbjct: 328 LLVIPPAGNPHANPTGHASDPTAPDELVELHVDPDVCCAHSLLCKLPELFDGIGCLLLEG 149
Query: 148 XXXXXXXXVDGVLPG 104
VDGVLPG
Sbjct: 148 TAMEALVEVDGVLPG 104
Score = 134 bits (287), Expect = 4e-031
Identities = 66/123 (53%), Positives = 77/123 (62%)
Frame = +1 / +1
Query: 139 PRLHIQEEGTQRHQGDQEVCTEGHGHHGRQDRCEAQQAHLEQRDQERAAEGSCEDRPQEE 318
P L++QEEGTQ HQ EVCTEG+GH+ RQDR EAQQAHLEQ DQ+RA GS ED PQEE
Sbjct: 139 PWLYLQEEGTQCHQRAPEVCTEGYGHNRRQDRREAQQAHLEQWDQKRAP*GSREDCPQEE 318
Query: 319 R*GGCQGGTLLPCHRRGDPCRGLERAGDQGR*RNRLSCRVLHIFREFLVCICNSKTFCIQ 498
GG QGG LL HR C G E AG+QGR + + ++I R + FCI
Sbjct: 319 *RGGRQGGALLTRHRCRGAC*GFEGAGNQGRR*H*VDSFFIYIVRMSCYFALHQHVFCIL 498
Query: 499 GSF 507
F
Sbjct: 499 RKF 507
Score = 131 bits (281), Expect(3) = 6e-038
Identities = 56/63 (88%), Positives = 57/63 (90%)
Frame = -1 / -3
Query: 258 QMCLLSFTSILTSVVPMAFCANFLISLMALGAFFLNVQPWRRLWRLMVYSLVTTSSFLDA 79
QM LLSFTSILTSVVP+AFCANF SLMALGAFFL VQPWRRLWRL VYSLVTTSSFL A
Sbjct: 258 QMSLLSFTSILTSVVPIAFCANFRSSLMALGAFFLKVQPWRRLWRLTVYSLVTTSSFLGA 79
Query: 78 PPF 70
PPF
Sbjct: 78 PPF 70
Score = 34.5 bits (69), Expect(3) = 6e-038
Identities = 11/16 (68%), Positives = 12/16 (75%)
Frame = -2 / -1
Query: 335 WHPPHRSSCGRSSHEP 288
W PP SSCG+SS EP
Sbjct: 335 WRPPRHSSCGQSSREP 288
Score = 29.0 bits (57), Expect(3) = 6e-038
Identities = 12/14 (85%), Positives = 12/14 (85%)
Frame = -1 / -3
Query: 390 FKPSAGISATVTRE 349
FKPSAG SATVT E
Sbjct: 390 FKPSAGTSATVTSE 349
>gb|AW982157.3|AW982157 HVSMEg0002A21f Hordeum vulgare pre-anthesis spike EST library
HVcDNA0008 (white to yellow anther) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEg0002A21f, mRNA sequence
Length = 568
Score = 240 bits (518), Expect = 6e-063
Identities = 106/146 (72%), Positives = 117/146 (80%)
Frame = +2 / +1
Query: 59 MSQGKGGASRKEEVVTREYTINLHKRLHGCTFKKKAPNAIKEIRKFAQKAMGTTDVRIDV 238
M+ KGGA RKEEVVTREYT+NLHKRLHGCTFKKKAPNAIKE+RKFAQKAMGTTDVRIDV
Sbjct: 64 MADKKGGAPRKEEVVTREYTVNLHKRLHGCTFKKKAPNAIKELRKFAQKAMGTTDVRIDV 243
Query: 239 KLNKHIWSSGIXXXXXXXXXXXXXXXNDEEDAKEELYSLVTVAEIPAEGLKGLGTKVVDE 418
KLNK IWSSGI NDEEDAKEELYSLVTVAE+PAEGLKGLGTKVVD+
Sbjct: 244 KLNKLIWSSGIRSVPRRVRVRIARMRNDEEDAKEELYSLVTVAEVPAEGLKGLGTKVVDD 423
Query: 419 TD*AVAFSTSLESS*FVFATAKPFVS 496
T+* ++ ST LE + + T+ FVS
Sbjct: 424 TE*TLSLSTLLE*AVILHCTSMFFVS 501
Score = 140 bits (301), Expect = 5e-033
Identities = 63/135 (46%), Positives = 78/135 (57%)
Frame = -3 / -2
Query: 508 KNFLGYKRFCCCKYKLGTL*RCGERDSLIGFVNDLGPQPFQALGRDLRDGDKGVEFLLGI 329
K GYK+ + *+C R SL+ ++D G QP Q L R L +GD+ VE LLG+
Sbjct: 513 KTSAGYKKHAGAMQNNSSF*QCR*RKSLLSVIDDFGSQPLQTLSRHLGNGDE*VELLLGV 334
Query: 328 LLIVPLAGDPHTNPPRHXXXXXXXDVLVELHIDPDVRGAHGLLCKLPDLLDGVGXXXXXX 149
LL++P AG+PH NP H D LVELH+DPDV AH LLCKLP+L DG+G
Sbjct: 333 LLVIPHAGNPHANPTGHASDPTAPDELVELHVDPDVCCAHSLLCKLPELFDGIGCLLLEG 154
Query: 148 XXXXXXXXVDGVLPG 104
VDGVLPG
Sbjct: 153 TAMEALVEVDGVLPG 109
Score = 131 bits (281), Expect(3) = 6e-038
Identities = 56/63 (88%), Positives = 57/63 (90%)
Frame = -1 / -3
Query: 258 QMCLLSFTSILTSVVPMAFCANFLISLMALGAFFLNVQPWRRLWRLMVYSLVTTSSFLDA 79
QM LLSFTSILTSVVP+AFCANF SLMALGAFFL VQPWRRLWRL VYSLVTTSSFL A
Sbjct: 263 QMSLLSFTSILTSVVPIAFCANFRSSLMALGAFFLKVQPWRRLWRLTVYSLVTTSSFLGA 84
Query: 78 PPF 70
PPF
Sbjct: 83 PPF 75
Score = 129 bits (276), Expect = 1e-029
Identities = 64/123 (52%), Positives = 75/123 (60%)
Frame = +1 / +3
Query: 139 PRLHIQEEGTQRHQGDQEVCTEGHGHHGRQDRCEAQQAHLEQRDQERAAEGSCEDRPQEE 318
P L++QEEGTQ HQ EVCTEG+GH+ RQDR EAQQAHLEQ DQ+RA GS ED P EE
Sbjct: 144 PWLYLQEEGTQCHQRAPEVCTEGYGHNRRQDRREAQQAHLEQWDQKRAP*GSREDCPHEE 323
Query: 319 R*GGCQGGTLLPCHRRGDPCRGLERAGDQGR*RNRLSCRVLHIFREFLVCICNSKTFCIQ 498
GG QGG LL HR C G E AG+Q R + + ++I R + FCI
Sbjct: 324 *RGGRQGGALLTRHRCRGAC*GFEGAGNQSRR*H*VDSFFIYIVRMSCYFALHQHVFCIL 503
Query: 499 GSF 507
F
Sbjct: 504 RKF 512
Score = 34.5 bits (69), Expect(3) = 6e-038
Identities = 11/16 (68%), Positives = 12/16 (75%)
Frame = -2 / -1
Query: 335 WHPPHRSSCGRSSHEP 288
W PP SSCG+SS EP
Sbjct: 340 WRPPRHSSCGQSSREP 293
Score = 29.0 bits (57), Expect(3) = 6e-038
Identities = 12/14 (85%), Positives = 12/14 (85%)
Frame = -1 / -3
Query: 390 FKPSAGISATVTRE 349
FKPSAG SATVT E
Sbjct: 395 FKPSAGTSATVTSE 354
>gb|BE455946.3|BE455946 HVSMEg0017N08f Hordeum vulgare pre-anthesis spike EST library
HVcDNA0008 (white to yellow anther) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEg0017N08f, mRNA sequence
Length = 564
Score = 240 bits (518), Expect = 6e-063
Identities = 106/146 (72%), Positives = 117/146 (80%)
Frame = +2 / +3
Query: 59 MSQGKGGASRKEEVVTREYTINLHKRLHGCTFKKKAPNAIKEIRKFAQKAMGTTDVRIDV 238
M+ KGGA RKEEVVTREYT+NLHKRLHGCTFKKKAPNAIKE+RKFAQKAMGTTDVRIDV
Sbjct: 60 MADKKGGAPRKEEVVTREYTVNLHKRLHGCTFKKKAPNAIKELRKFAQKAMGTTDVRIDV 239
Query: 239 KLNKHIWSSGIXXXXXXXXXXXXXXXNDEEDAKEELYSLVTVAEIPAEGLKGLGTKVVDE 418
KLNK IWSSGI NDEEDAKEELYSLVTVAE+PAEGLKGLGTKVVD+
Sbjct: 240 KLNKLIWSSGIRSVPRRVRVRIARRRNDEEDAKEELYSLVTVAEVPAEGLKGLGTKVVDD 419
Query: 419 TD*AVAFSTSLESS*FVFATAKPFVS 496
T+* ++ ST LE + + T+ FVS
Sbjct: 420 TE*TLSLSTLLE*AVILHCTSMFFVS 497
Score = 142 bits (305), Expect = 1e-033
Identities = 64/135 (47%), Positives = 79/135 (58%)
Frame = -3 / -2
Query: 508 KNFLGYKRFCCCKYKLGTL*RCGERDSLIGFVNDLGPQPFQALGRDLRDGDKGVEFLLGI 329
K GYK+ + *+C R SL+ ++DLG QP Q L R L +GD+ VE LLG+
Sbjct: 509 KTSAGYKKHAGAMQNNSSF*QCR*RKSLLSVIDDLGSQPLQTLSRHLGNGDE*VELLLGV 330
Query: 328 LLIVPLAGDPHTNPPRHXXXXXXXDVLVELHIDPDVRGAHGLLCKLPDLLDGVGXXXXXX 149
LL++P AG+PH NP H D LVELH+DPDV AH LLCKLP+L DG+G
Sbjct: 329 LLVIPPAGNPHANPTGHASDPTAPDELVELHVDPDVCCAHSLLCKLPELFDGIGCLLLEG 150
Query: 148 XXXXXXXXVDGVLPG 104
VDGVLPG
Sbjct: 149 TAMEALVEVDGVLPG 105
Score = 134 bits (287), Expect = 4e-031
Identities = 66/123 (53%), Positives = 77/123 (62%)
Frame = +1 / +2
Query: 139 PRLHIQEEGTQRHQGDQEVCTEGHGHHGRQDRCEAQQAHLEQRDQERAAEGSCEDRPQEE 318
P L++QEEGTQ HQ EVCTEG+GH+ RQDR EAQQAHLEQ DQ+RA GS ED PQEE
Sbjct: 140 PWLYLQEEGTQCHQRAPEVCTEGYGHNRRQDRREAQQAHLEQWDQKRAP*GSREDCPQEE 319
Query: 319 R*GGCQGGTLLPCHRRGDPCRGLERAGDQGR*RNRLSCRVLHIFREFLVCICNSKTFCIQ 498
GG QGG LL HR C G E AG+QGR + + ++I R + FCI
Sbjct: 320 *RGGRQGGALLTRHRCRGAC*GFEGAGNQGRR*H*VDSFFIYIVRMSCYFALHQHVFCIL 499
Query: 499 GSF 507
F
Sbjct: 500 RKF 508
Score = 131 bits (281), Expect(3) = 6e-038
Identities = 56/63 (88%), Positives = 57/63 (90%)
Frame = -1 / -3
Query: 258 QMCLLSFTSILTSVVPMAFCANFLISLMALGAFFLNVQPWRRLWRLMVYSLVTTSSFLDA 79
QM LLSFTSILTSVVP+AFCANF SLMALGAFFL VQPWRRLWRL VYSLVTTSSFL A
Sbjct: 259 QMSLLSFTSILTSVVPIAFCANFRSSLMALGAFFLKVQPWRRLWRLTVYSLVTTSSFLGA 80
Query: 78 PPF 70
PPF
Sbjct: 79 PPF 71
Score = 34.5 bits (69), Expect(3) = 6e-038
Identities = 11/16 (68%), Positives = 12/16 (75%)
Frame = -2 / -1
Query: 335 WHPPHRSSCGRSSHEP 288
W PP SSCG+SS EP
Sbjct: 336 WRPPRHSSCGQSSREP 289
Score = 29.0 bits (57), Expect(3) = 6e-038
Identities = 12/14 (85%), Positives = 12/14 (85%)
Frame = -1 / -3
Query: 390 FKPSAGISATVTRE 349
FKPSAG SATVT E
Sbjct: 391 FKPSAGTSATVTSE 350
>gb|BQ458327.1|BQ458327 HA05J02r HA Hordeum vulgare subsp. vulgare cDNA clone HA05J02
5-PRIME, mRNA sequence
Length = 573
Score = 240 bits (518), Expect = 6e-063
Identities = 106/146 (72%), Positives = 117/146 (80%)
Frame = +2 / +3
Query: 59 MSQGKGGASRKEEVVTREYTINLHKRLHGCTFKKKAPNAIKEIRKFAQKAMGTTDVRIDV 238
M+ KGGA RKEEVVTREYT+NLHKRLHGCTFKKKAPNAIKE+RKFAQKAMGTTDVRIDV
Sbjct: 72 MADKKGGAPRKEEVVTREYTVNLHKRLHGCTFKKKAPNAIKELRKFAQKAMGTTDVRIDV 251
Query: 239 KLNKHIWSSGIXXXXXXXXXXXXXXXNDEEDAKEELYSLVTVAEIPAEGLKGLGTKVVDE 418
KLNK IWSSGI NDEEDAKEELYSLVTVAE+PAEGLKGLGTKVVD+
Sbjct: 252 KLNKLIWSSGIRSVPRRVRVRIARRRNDEEDAKEELYSLVTVAEVPAEGLKGLGTKVVDD 431
Query: 419 TD*AVAFSTSLESS*FVFATAKPFVS 496
T+* ++ ST LE + + T+ FVS
Sbjct: 432 TE*TLSLSTLLE*AVILHCTSMFFVS 509
Score = 142 bits (305), Expect = 1e-033
Identities = 64/135 (47%), Positives = 79/135 (58%)
Frame = -3 / -2
Query: 508 KNFLGYKRFCCCKYKLGTL*RCGERDSLIGFVNDLGPQPFQALGRDLRDGDKGVEFLLGI 329
K GYK+ + *+C R SL+ ++DLG QP Q L R L +GD+ VE LLG+
Sbjct: 521 KTSAGYKKHAGAMQNNSSF*QCR*RKSLLSVIDDLGSQPLQTLSRHLGNGDE*VELLLGV 342
Query: 328 LLIVPLAGDPHTNPPRHXXXXXXXDVLVELHIDPDVRGAHGLLCKLPDLLDGVGXXXXXX 149
LL++P AG+PH NP H D LVELH+DPDV AH LLCKLP+L DG+G
Sbjct: 341 LLVIPPAGNPHANPTGHASDPTAPDELVELHVDPDVCCAHSLLCKLPELFDGIGCLLLEG 162
Query: 148 XXXXXXXXVDGVLPG 104
VDGVLPG
Sbjct: 161 TAMEALVEVDGVLPG 117
Score = 134 bits (287), Expect = 4e-031
Identities = 66/123 (53%), Positives = 77/123 (62%)
Frame = +1 / +2
Query: 139 PRLHIQEEGTQRHQGDQEVCTEGHGHHGRQDRCEAQQAHLEQRDQERAAEGSCEDRPQEE 318
P L++QEEGTQ HQ EVCTEG+GH+ RQDR EAQQAHLEQ DQ+RA GS ED PQEE
Sbjct: 152 PWLYLQEEGTQCHQRAPEVCTEGYGHNRRQDRREAQQAHLEQWDQKRAP*GSREDCPQEE 331
Query: 319 R*GGCQGGTLLPCHRRGDPCRGLERAGDQGR*RNRLSCRVLHIFREFLVCICNSKTFCIQ 498
GG QGG LL HR C G E AG+QGR + + ++I R + FCI
Sbjct: 332 *RGGRQGGALLTRHRCRGAC*GFEGAGNQGRR*H*VDSFFIYIVRMSCYFALHQHVFCIL 511
Query: 499 GSF 507
F
Sbjct: 512 RKF 520
Score = 131 bits (281), Expect(3) = 6e-038
Identities = 56/63 (88%), Positives = 57/63 (90%)
Frame = -1 / -3
Query: 258 QMCLLSFTSILTSVVPMAFCANFLISLMALGAFFLNVQPWRRLWRLMVYSLVTTSSFLDA 79
QM LLSFTSILTSVVP+AFCANF SLMALGAFFL VQPWRRLWRL VYSLVTTSSFL A
Sbjct: 271 QMSLLSFTSILTSVVPIAFCANFRSSLMALGAFFLKVQPWRRLWRLTVYSLVTTSSFLGA 92
Query: 78 PPF 70
PPF
Sbjct: 91 PPF 83
Score = 34.5 bits (69), Expect(3) = 6e-038
Identities = 11/16 (68%), Positives = 12/16 (75%)
Frame = -2 / -1
Query: 335 WHPPHRSSCGRSSHEP 288
W PP SSCG+SS EP
Sbjct: 348 WRPPRHSSCGQSSREP 301
Score = 29.0 bits (57), Expect(3) = 6e-038
Identities = 12/14 (85%), Positives = 12/14 (85%)
Frame = -1 / -3
Query: 390 FKPSAGISATVTRE 349
FKPSAG SATVT E
Sbjct: 403 FKPSAGTSATVTSE 362
>gb|BQ459875.1|BQ459875 HA07N07r HA Hordeum vulgare subsp. vulgare cDNA clone HA07N07
5-PRIME, mRNA sequence
Length = 550
Score = 240 bits (518), Expect = 6e-063
Identities = 106/146 (72%), Positives = 117/146 (80%)
Frame = +2 / +1
Query: 59 MSQGKGGASRKEEVVTREYTINLHKRLHGCTFKKKAPNAIKEIRKFAQKAMGTTDVRIDV 238
M+ KGGA RKEEVVTREYT+NLHKRLHGCTFKKKAPNAIKE+RKFAQKAMGTTDVRIDV
Sbjct: 61 MADKKGGAPRKEEVVTREYTVNLHKRLHGCTFKKKAPNAIKELRKFAQKAMGTTDVRIDV 240
Query: 239 KLNKHIWSSGIXXXXXXXXXXXXXXXNDEEDAKEELYSLVTVAEIPAEGLKGLGTKVVDE 418
KLNK IWSSGI NDEEDAKEELYSLVTVAE+PAEGLKGLGTKVVD+
Sbjct: 241 KLNKLIWSSGIRSVPRRVRVRIARRRNDEEDAKEELYSLVTVAEVPAEGLKGLGTKVVDD 420
Query: 419 TD*AVAFSTSLESS*FVFATAKPFVS 496
T+* ++ ST LE + + T+ FVS
Sbjct: 421 TE*TLSLSTLLE*AVILHCTSMFFVS 498
Score = 142 bits (305), Expect = 1e-033
Identities = 64/135 (47%), Positives = 79/135 (58%)
Frame = -3 / -2
Query: 508 KNFLGYKRFCCCKYKLGTL*RCGERDSLIGFVNDLGPQPFQALGRDLRDGDKGVEFLLGI 329
K GYK+ + *+C R SL+ ++DLG QP Q L R L +GD+ VE LLG+
Sbjct: 510 KTSAGYKKHAGAMQNNSSF*QCR*RKSLLSVIDDLGSQPLQTLSRHLGNGDE*VELLLGV 331
Query: 328 LLIVPLAGDPHTNPPRHXXXXXXXDVLVELHIDPDVRGAHGLLCKLPDLLDGVGXXXXXX 149
LL++P AG+PH NP H D LVELH+DPDV AH LLCKLP+L DG+G
Sbjct: 330 LLVIPPAGNPHANPTGHASDPTAPDELVELHVDPDVCCAHSLLCKLPELFDGIGCLLLEG 151
Query: 148 XXXXXXXXVDGVLPG 104
VDGVLPG
Sbjct: 150 TAMEALVEVDGVLPG 106
Score = 134 bits (287), Expect = 4e-031
Identities = 66/123 (53%), Positives = 77/123 (62%)
Frame = +1 / +3
Query: 139 PRLHIQEEGTQRHQGDQEVCTEGHGHHGRQDRCEAQQAHLEQRDQERAAEGSCEDRPQEE 318
P L++QEEGTQ HQ EVCTEG+GH+ RQDR EAQQAHLEQ DQ+RA GS ED PQEE
Sbjct: 141 PWLYLQEEGTQCHQRAPEVCTEGYGHNRRQDRREAQQAHLEQWDQKRAP*GSREDCPQEE 320
Query: 319 R*GGCQGGTLLPCHRRGDPCRGLERAGDQGR*RNRLSCRVLHIFREFLVCICNSKTFCIQ 498
GG QGG LL HR C G E AG+QGR + + ++I R + FCI
Sbjct: 321 *RGGRQGGALLTRHRCRGAC*GFEGAGNQGRR*H*VDSFFIYIVRMSCYFALHQHVFCIL 500
Query: 499 GSF 507
F
Sbjct: 501 RKF 509
Score = 131 bits (281), Expect(3) = 6e-038
Identities = 56/63 (88%), Positives = 57/63 (90%)
Frame = -1 / -3
Query: 258 QMCLLSFTSILTSVVPMAFCANFLISLMALGAFFLNVQPWRRLWRLMVYSLVTTSSFLDA 79
QM LLSFTSILTSVVP+AFCANF SLMALGAFFL VQPWRRLWRL VYSLVTTSSFL A
Sbjct: 260 QMSLLSFTSILTSVVPIAFCANFRSSLMALGAFFLKVQPWRRLWRLTVYSLVTTSSFLGA 81
Query: 78 PPF 70
PPF
Sbjct: 80 PPF 72
Score = 34.5 bits (69), Expect(3) = 6e-038
Identities = 11/16 (68%), Positives = 12/16 (75%)
Frame = -2 / -1
Query: 335 WHPPHRSSCGRSSHEP 288
W PP SSCG+SS EP
Sbjct: 337 WRPPRHSSCGQSSREP 290
Score = 29.0 bits (57), Expect(3) = 6e-038
Identities = 12/14 (85%), Positives = 12/14 (85%)
Frame = -1 / -3
Query: 390 FKPSAGISATVTRE 349
FKPSAG SATVT E
Sbjct: 392 FKPSAGTSATVTSE 351
>gb|BQ460346.1|BQ460346 HA09P16r HA Hordeum vulgare subsp. vulgare cDNA clone HA09P16
5-PRIME, mRNA sequence
Length = 583
Score = 240 bits (518), Expect = 6e-063
Identities = 106/146 (72%), Positives = 117/146 (80%)
Frame = +2 / +1
Query: 59 MSQGKGGASRKEEVVTREYTINLHKRLHGCTFKKKAPNAIKEIRKFAQKAMGTTDVRIDV 238
M+ KGGA RKEEVVTREYT+NLHKRLHGCTFKKKAPNAIKE+RKFAQKAMGTTDVRIDV
Sbjct: 79 MADKKGGAPRKEEVVTREYTVNLHKRLHGCTFKKKAPNAIKELRKFAQKAMGTTDVRIDV 258
Query: 239 KLNKHIWSSGIXXXXXXXXXXXXXXXNDEEDAKEELYSLVTVAEIPAEGLKGLGTKVVDE 418
KLNK IWSSGI NDEEDAKEELYSLVTVAE+PAEGLKGLGTKVVD+
Sbjct: 259 KLNKLIWSSGIRSVPRRVRVRIARRRNDEEDAKEELYSLVTVAEVPAEGLKGLGTKVVDD 438
Query: 419 TD*AVAFSTSLESS*FVFATAKPFVS 496
T+* ++ ST LE + + T+ FVS
Sbjct: 439 TE*TLSLSTLLE*AVILHCTSMFFVS 516
Score = 142 bits (305), Expect = 1e-033
Identities = 64/135 (47%), Positives = 79/135 (58%)
Frame = -3 / -2
Query: 508 KNFLGYKRFCCCKYKLGTL*RCGERDSLIGFVNDLGPQPFQALGRDLRDGDKGVEFLLGI 329
K GYK+ + *+C R SL+ ++DLG QP Q L R L +GD+ VE LLG+
Sbjct: 528 KTSAGYKKHAGAMQNNSSF*QCR*RKSLLSVIDDLGSQPLQTLSRHLGNGDE*VELLLGV 349
Query: 328 LLIVPLAGDPHTNPPRHXXXXXXXDVLVELHIDPDVRGAHGLLCKLPDLLDGVGXXXXXX 149
LL++P AG+PH NP H D LVELH+DPDV AH LLCKLP+L DG+G
Sbjct: 348 LLVIPPAGNPHANPTGHASDPTAPDELVELHVDPDVCCAHSLLCKLPELFDGIGCLLLEG 169
Query: 148 XXXXXXXXVDGVLPG 104
VDGVLPG
Sbjct: 168 TAMEALVEVDGVLPG 124
Score = 134 bits (287), Expect = 4e-031
Identities = 66/123 (53%), Positives = 77/123 (62%)
Frame = +1 / +3
Query: 139 PRLHIQEEGTQRHQGDQEVCTEGHGHHGRQDRCEAQQAHLEQRDQERAAEGSCEDRPQEE 318
P L++QEEGTQ HQ EVCTEG+GH+ RQDR EAQQAHLEQ DQ+RA GS ED PQEE
Sbjct: 159 PWLYLQEEGTQCHQRAPEVCTEGYGHNRRQDRREAQQAHLEQWDQKRAP*GSREDCPQEE 338
Query: 319 R*GGCQGGTLLPCHRRGDPCRGLERAGDQGR*RNRLSCRVLHIFREFLVCICNSKTFCIQ 498
GG QGG LL HR C G E AG+QGR + + ++I R + FCI
Sbjct: 339 *RGGRQGGALLTRHRCRGAC*GFEGAGNQGRR*H*VDSFFIYIVRMSCYFALHQHVFCIL 518
Query: 499 GSF 507
F
Sbjct: 519 RKF 527
Score = 131 bits (281), Expect(3) = 6e-038
Identities = 56/63 (88%), Positives = 57/63 (90%)
Frame = -1 / -3
Query: 258 QMCLLSFTSILTSVVPMAFCANFLISLMALGAFFLNVQPWRRLWRLMVYSLVTTSSFLDA 79
QM LLSFTSILTSVVP+AFCANF SLMALGAFFL VQPWRRLWRL VYSLVTTSSFL A
Sbjct: 278 QMSLLSFTSILTSVVPIAFCANFRSSLMALGAFFLKVQPWRRLWRLTVYSLVTTSSFLGA 99
Query: 78 PPF 70
PPF
Sbjct: 98 PPF 90
Score = 34.5 bits (69), Expect(3) = 6e-038
Identities = 11/16 (68%), Positives = 12/16 (75%)
Frame = -2 / -1
Query: 335 WHPPHRSSCGRSSHEP 288
W PP SSCG+SS EP
Sbjct: 355 WRPPRHSSCGQSSREP 308
Score = 29.0 bits (57), Expect(3) = 6e-038
Identities = 12/14 (85%), Positives = 12/14 (85%)
Frame = -1 / -3
Query: 390 FKPSAGISATVTRE 349
FKPSAG SATVT E
Sbjct: 410 FKPSAGTSATVTSE 369
>gb|BQ657029.1|BQ657029 HA09P16u HA Hordeum vulgare subsp. vulgare cDNA clone HA09P16
3-PRIME, mRNA sequence
Length = 583
Score = 240 bits (518), Expect = 6e-063
Identities = 106/146 (72%), Positives = 117/146 (80%)
Frame = +2 / -1
Query: 59 MSQGKGGASRKEEVVTREYTINLHKRLHGCTFKKKAPNAIKEIRKFAQKAMGTTDVRIDV 238
M+ KGGA RKEEVVTREYT+NLHKRLHGCTFKKKAPNAIKE+RKFAQKAMGTTDVRIDV
Sbjct: 514 MADKKGGAPRKEEVVTREYTVNLHKRLHGCTFKKKAPNAIKELRKFAQKAMGTTDVRIDV 335
Query: 239 KLNKHIWSSGIXXXXXXXXXXXXXXXNDEEDAKEELYSLVTVAEIPAEGLKGLGTKVVDE 418
KLNK IWSSGI NDEEDAKEELYSLVTVAE+PAEGLKGLGTKVVD+
Sbjct: 334 KLNKLIWSSGIRSVPRRVRVRIARRRNDEEDAKEELYSLVTVAEVPAEGLKGLGTKVVDD 155
Query: 419 TD*AVAFSTSLESS*FVFATAKPFVS 496
T+* ++ ST LE + + T+ FVS
Sbjct: 154 TE*TLSLSTLLE*AVILHCTSMFFVS 77
Score = 142 bits (305), Expect = 1e-033
Identities = 64/135 (47%), Positives = 79/135 (58%)
Frame = -3 / +2
Query: 508 KNFLGYKRFCCCKYKLGTL*RCGERDSLIGFVNDLGPQPFQALGRDLRDGDKGVEFLLGI 329
K GYK+ + *+C R SL+ ++DLG QP Q L R L +GD+ VE LLG+
Sbjct: 65 KTSAGYKKHAGAMQNNSSF*QCR*RKSLLSVIDDLGSQPLQTLSRHLGNGDE*VELLLGV 244
Query: 328 LLIVPLAGDPHTNPPRHXXXXXXXDVLVELHIDPDVRGAHGLLCKLPDLLDGVGXXXXXX 149
LL++P AG+PH NP H D LVELH+DPDV AH LLCKLP+L DG+G
Sbjct: 245 LLVIPPAGNPHANPTGHASDPTAPDELVELHVDPDVCCAHSLLCKLPELFDGIGCLLLEG 424
Query: 148 XXXXXXXXVDGVLPG 104
VDGVLPG
Sbjct: 425 TAMEALVEVDGVLPG 469
Score = 134 bits (287), Expect = 4e-031
Identities = 66/123 (53%), Positives = 77/123 (62%)
Frame = +1 / -3
Query: 139 PRLHIQEEGTQRHQGDQEVCTEGHGHHGRQDRCEAQQAHLEQRDQERAAEGSCEDRPQEE 318
P L++QEEGTQ HQ EVCTEG+GH+ RQDR EAQQAHLEQ DQ+RA GS ED PQEE
Sbjct: 434 PWLYLQEEGTQCHQRAPEVCTEGYGHNRRQDRREAQQAHLEQWDQKRAP*GSREDCPQEE 255
Query: 319 R*GGCQGGTLLPCHRRGDPCRGLERAGDQGR*RNRLSCRVLHIFREFLVCICNSKTFCIQ 498
GG QGG LL HR C G E AG+QGR + + ++I R + FCI
Sbjct: 254 *RGGRQGGALLTRHRCRGAC*GFEGAGNQGRR*H*VDSFFIYIVRMSCYFALHQHVFCIL 75
Query: 499 GSF 507
F
Sbjct: 74 RKF 66
Score = 131 bits (281), Expect(3) = 6e-038
Identities = 56/63 (88%), Positives = 57/63 (90%)
Frame = -1 / +3
Query: 258 QMCLLSFTSILTSVVPMAFCANFLISLMALGAFFLNVQPWRRLWRLMVYSLVTTSSFLDA 79
QM LLSFTSILTSVVP+AFCANF SLMALGAFFL VQPWRRLWRL VYSLVTTSSFL A
Sbjct: 315 QMSLLSFTSILTSVVPIAFCANFRSSLMALGAFFLKVQPWRRLWRLTVYSLVTTSSFLGA 494
Query: 78 PPF 70
PPF
Sbjct: 495 PPF 503
Score = 34.5 bits (69), Expect(3) = 6e-038
Identities = 11/16 (68%), Positives = 12/16 (75%)
Frame = -2 / +1
Query: 335 WHPPHRSSCGRSSHEP 288
W PP SSCG+SS EP
Sbjct: 238 WRPPRHSSCGQSSREP 285
Score = 29.0 bits (57), Expect(3) = 6e-038
Identities = 12/14 (85%), Positives = 12/14 (85%)
Frame = -1 / +3
Query: 390 FKPSAGISATVTRE 349
FKPSAG SATVT E
Sbjct: 183 FKPSAGTSATVTSE 224
>gb|BU985175.1|BU985175 HF06F15r HF Hordeum vulgare subsp. vulgare cDNA clone HF06F15
5-PRIME, mRNA sequence
Length = 589
Score = 240 bits (518), Expect = 6e-063
Identities = 106/146 (72%), Positives = 117/146 (80%)
Frame = +2 / +2
Query: 59 MSQGKGGASRKEEVVTREYTINLHKRLHGCTFKKKAPNAIKEIRKFAQKAMGTTDVRIDV 238
M+ KGGA RKEEVVTREYT+NLHKRLHGCTFKKKAPNAIKE+RKFAQKAMGTTDVRIDV
Sbjct: 35 MADKKGGAPRKEEVVTREYTVNLHKRLHGCTFKKKAPNAIKELRKFAQKAMGTTDVRIDV 214
Query: 239 KLNKHIWSSGIXXXXXXXXXXXXXXXNDEEDAKEELYSLVTVAEIPAEGLKGLGTKVVDE 418
KLNK IWSSGI NDEEDAKEELYSLVTVAE+PAEGLKGLGTKVVD+
Sbjct: 215 KLNKLIWSSGIRSVPRRVRVRIARRRNDEEDAKEELYSLVTVAEVPAEGLKGLGTKVVDD 394
Query: 419 TD*AVAFSTSLESS*FVFATAKPFVS 496
T+* ++ ST LE + + T+ FVS
Sbjct: 395 TE*TLSLSTLLE*AVILHCTSMFFVS 472
Score = 142 bits (305), Expect = 1e-033
Identities = 64/135 (47%), Positives = 79/135 (58%)
Frame = -3 / -1
Query: 508 KNFLGYKRFCCCKYKLGTL*RCGERDSLIGFVNDLGPQPFQALGRDLRDGDKGVEFLLGI 329
K GYK+ + *+C R SL+ ++DLG QP Q L R L +GD+ VE LLG+
Sbjct: 484 KTSAGYKKHAGAMQNNSSF*QCR*RKSLLSVIDDLGSQPLQTLSRHLGNGDE*VELLLGV 305
Query: 328 LLIVPLAGDPHTNPPRHXXXXXXXDVLVELHIDPDVRGAHGLLCKLPDLLDGVGXXXXXX 149
LL++P AG+PH NP H D LVELH+DPDV AH LLCKLP+L DG+G
Sbjct: 304 LLVIPPAGNPHANPTGHASDPTAPDELVELHVDPDVCCAHSLLCKLPELFDGIGCLLLEG 125
Query: 148 XXXXXXXXVDGVLPG 104
VDGVLPG
Sbjct: 124 TAMEALVEVDGVLPG 80
Score = 134 bits (287), Expect = 4e-031
Identities = 66/123 (53%), Positives = 77/123 (62%)
Frame = +1 / +1
Query: 139 PRLHIQEEGTQRHQGDQEVCTEGHGHHGRQDRCEAQQAHLEQRDQERAAEGSCEDRPQEE 318
P L++QEEGTQ HQ EVCTEG+GH+ RQDR EAQQAHLEQ DQ+RA GS ED PQEE
Sbjct: 115 PWLYLQEEGTQCHQRAPEVCTEGYGHNRRQDRREAQQAHLEQWDQKRAP*GSREDCPQEE 294
Query: 319 R*GGCQGGTLLPCHRRGDPCRGLERAGDQGR*RNRLSCRVLHIFREFLVCICNSKTFCIQ 498
GG QGG LL HR C G E AG+QGR + + ++I R + FCI
Sbjct: 295 *RGGRQGGALLTRHRCRGAC*GFEGAGNQGRR*H*VDSFFIYIVRMSCYFALHQHVFCIL 474
Query: 499 GSF 507
F
Sbjct: 475 RKF 483
Score = 131 bits (281), Expect(3) = 6e-038
Identities = 56/63 (88%), Positives = 57/63 (90%)
Frame = -1 / -2
Query: 258 QMCLLSFTSILTSVVPMAFCANFLISLMALGAFFLNVQPWRRLWRLMVYSLVTTSSFLDA 79
QM LLSFTSILTSVVP+AFCANF SLMALGAFFL VQPWRRLWRL VYSLVTTSSFL A
Sbjct: 234 QMSLLSFTSILTSVVPIAFCANFRSSLMALGAFFLKVQPWRRLWRLTVYSLVTTSSFLGA 55
Query: 78 PPF 70
PPF
Sbjct: 54 PPF 46
Score = 34.5 bits (69), Expect(3) = 6e-038
Identities = 11/16 (68%), Positives = 12/16 (75%)
Frame = -2 / -3
Query: 335 WHPPHRSSCGRSSHEP 288
W PP SSCG+SS EP
Sbjct: 311 WRPPRHSSCGQSSREP 264
Score = 29.0 bits (57), Expect(3) = 6e-038
Identities = 12/14 (85%), Positives = 12/14 (85%)
Frame = -1 / -2
Query: 390 FKPSAGISATVTRE 349
FKPSAG SATVT E
Sbjct: 366 FKPSAGTSATVTSE 325
>gb|BU988656.1|BU988656 HF18E24r HF Hordeum vulgare subsp. vulgare cDNA clone HF18E24
5-PRIME, mRNA sequence
Length = 567
Score = 240 bits (518), Expect = 6e-063
Identities = 106/146 (72%), Positives = 117/146 (80%)
Frame = +2 / +2
Query: 59 MSQGKGGASRKEEVVTREYTINLHKRLHGCTFKKKAPNAIKEIRKFAQKAMGTTDVRIDV 238
M+ KGGA RKEEVVTREYT+NLHKRLHGCTFKKKAPNAIKE+RKFAQKAMGTTDVRIDV
Sbjct: 77 MADKKGGAPRKEEVVTREYTVNLHKRLHGCTFKKKAPNAIKELRKFAQKAMGTTDVRIDV 256
Query: 239 KLNKHIWSSGIXXXXXXXXXXXXXXXNDEEDAKEELYSLVTVAEIPAEGLKGLGTKVVDE 418
KLNK IWSSGI NDEEDAKEELYSLVTVAE+PAEGLKGLGTKVVD+
Sbjct: 257 KLNKLIWSSGIRSVPRRVRVRIARRRNDEEDAKEELYSLVTVAEVPAEGLKGLGTKVVDD 436
Query: 419 TD*AVAFSTSLESS*FVFATAKPFVS 496
T+* ++ ST LE + + T+ FVS
Sbjct: 437 TE*TLSLSTLLE*AVILHCTSMFFVS 514
Score = 142 bits (305), Expect = 1e-033
Identities = 64/135 (47%), Positives = 79/135 (58%)
Frame = -3 / -3
Query: 508 KNFLGYKRFCCCKYKLGTL*RCGERDSLIGFVNDLGPQPFQALGRDLRDGDKGVEFLLGI 329
K GYK+ + *+C R SL+ ++DLG QP Q L R L +GD+ VE LLG+
Sbjct: 526 KTSAGYKKHAGAMQNNSSF*QCR*RKSLLSVIDDLGSQPLQTLSRHLGNGDE*VELLLGV 347
Query: 328 LLIVPLAGDPHTNPPRHXXXXXXXDVLVELHIDPDVRGAHGLLCKLPDLLDGVGXXXXXX 149
LL++P AG+PH NP H D LVELH+DPDV AH LLCKLP+L DG+G
Sbjct: 346 LLVIPPAGNPHANPTGHASDPTAPDELVELHVDPDVCCAHSLLCKLPELFDGIGCLLLEG 167
Query: 148 XXXXXXXXVDGVLPG 104
VDGVLPG
Sbjct: 166 TAMEALVEVDGVLPG 122
Score = 134 bits (287), Expect = 4e-031
Identities = 66/123 (53%), Positives = 77/123 (62%)
Frame = +1 / +1
Query: 139 PRLHIQEEGTQRHQGDQEVCTEGHGHHGRQDRCEAQQAHLEQRDQERAAEGSCEDRPQEE 318
P L++QEEGTQ HQ EVCTEG+GH+ RQDR EAQQAHLEQ DQ+RA GS ED PQEE
Sbjct: 157 PWLYLQEEGTQCHQRAPEVCTEGYGHNRRQDRREAQQAHLEQWDQKRAP*GSREDCPQEE 336
Query: 319 R*GGCQGGTLLPCHRRGDPCRGLERAGDQGR*RNRLSCRVLHIFREFLVCICNSKTFCIQ 498
GG QGG LL HR C G E AG+QGR + + ++I R + FCI
Sbjct: 337 *RGGRQGGALLTRHRCRGAC*GFEGAGNQGRR*H*VDSFFIYIVRMSCYFALHQHVFCIL 516
Query: 499 GSF 507
F
Sbjct: 517 RKF 525
Score = 131 bits (281), Expect(3) = 6e-038
Identities = 56/63 (88%), Positives = 57/63 (90%)
Frame = -1 / -1
Query: 258 QMCLLSFTSILTSVVPMAFCANFLISLMALGAFFLNVQPWRRLWRLMVYSLVTTSSFLDA 79
QM LLSFTSILTSVVP+AFCANF SLMALGAFFL VQPWRRLWRL VYSLVTTSSFL A
Sbjct: 276 QMSLLSFTSILTSVVPIAFCANFRSSLMALGAFFLKVQPWRRLWRLTVYSLVTTSSFLGA 97
Query: 78 PPF 70
PPF
Sbjct: 96 PPF 88
Score = 34.5 bits (69), Expect(3) = 6e-038
Identities = 11/16 (68%), Positives = 12/16 (75%)
Frame = -2 / -2
Query: 335 WHPPHRSSCGRSSHEP 288
W PP SSCG+SS EP
Sbjct: 353 WRPPRHSSCGQSSREP 306
Score = 29.0 bits (57), Expect(3) = 6e-038
Identities = 12/14 (85%), Positives = 12/14 (85%)
Frame = -1 / -1
Query: 390 FKPSAGISATVTRE 349
FKPSAG SATVT E
Sbjct: 408 FKPSAGTSATVTSE 367
>gb|BU994595.1|BU994595 HM07J04r HM Hordeum vulgare subsp. vulgare cDNA clone HM07J04
5-PRIME, mRNA sequence
Length = 644
Score = 240 bits (518), Expect = 6e-063
Identities = 106/146 (72%), Positives = 117/146 (80%)
Frame = +2 / +2
Query: 59 MSQGKGGASRKEEVVTREYTINLHKRLHGCTFKKKAPNAIKEIRKFAQKAMGTTDVRIDV 238
M+ KGGA RKEEVVTREYT+NLHKRLHGCTFKKKAPNAIKE+RKFAQKAMGTTDVRIDV
Sbjct: 71 MADKKGGAPRKEEVVTREYTVNLHKRLHGCTFKKKAPNAIKELRKFAQKAMGTTDVRIDV 250
Query: 239 KLNKHIWSSGIXXXXXXXXXXXXXXXNDEEDAKEELYSLVTVAEIPAEGLKGLGTKVVDE 418
KLNK IWSSGI NDEEDAKEELYSLVTVAE+PAEGLKGLGTKVVD+
Sbjct: 251 KLNKLIWSSGIRSVPRRVRVRIARRRNDEEDAKEELYSLVTVAEVPAEGLKGLGTKVVDD 430
Query: 419 TD*AVAFSTSLESS*FVFATAKPFVS 496
T+* ++ ST LE + + T+ FVS
Sbjct: 431 TE*TLSLSTLLE*AVILHCTSMFFVS 508
Score = 142 bits (305), Expect = 1e-033
Identities = 64/135 (47%), Positives = 79/135 (58%)
Frame = -3 / -2
Query: 508 KNFLGYKRFCCCKYKLGTL*RCGERDSLIGFVNDLGPQPFQALGRDLRDGDKGVEFLLGI 329
K GYK+ + *+C R SL+ ++DLG QP Q L R L +GD+ VE LLG+
Sbjct: 520 KTSAGYKKHAGAMQNNSSF*QCR*RKSLLSVIDDLGSQPLQTLSRHLGNGDE*VELLLGV 341
Query: 328 LLIVPLAGDPHTNPPRHXXXXXXXDVLVELHIDPDVRGAHGLLCKLPDLLDGVGXXXXXX 149
LL++P AG+PH NP H D LVELH+DPDV AH LLCKLP+L DG+G
Sbjct: 340 LLVIPPAGNPHANPTGHASDPTAPDELVELHVDPDVCCAHSLLCKLPELFDGIGCLLLEG 161
Query: 148 XXXXXXXXVDGVLPG 104
VDGVLPG
Sbjct: 160 TAMEALVEVDGVLPG 116
Score = 134 bits (287), Expect = 4e-031
Identities = 66/123 (53%), Positives = 77/123 (62%)
Frame = +1 / +1
Query: 139 PRLHIQEEGTQRHQGDQEVCTEGHGHHGRQDRCEAQQAHLEQRDQERAAEGSCEDRPQEE 318
P L++QEEGTQ HQ EVCTEG+GH+ RQDR EAQQAHLEQ DQ+RA GS ED PQEE
Sbjct: 151 PWLYLQEEGTQCHQRAPEVCTEGYGHNRRQDRREAQQAHLEQWDQKRAP*GSREDCPQEE 330
Query: 319 R*GGCQGGTLLPCHRRGDPCRGLERAGDQGR*RNRLSCRVLHIFREFLVCICNSKTFCIQ 498
GG QGG LL HR C G E AG+QGR + + ++I R + FCI
Sbjct: 331 *RGGRQGGALLTRHRCRGAC*GFEGAGNQGRR*H*VDSFFIYIVRMSCYFALHQHVFCIL 510
Query: 499 GSF 507
F
Sbjct: 511 RKF 519
Score = 131 bits (281), Expect(3) = 6e-038
Identities = 56/63 (88%), Positives = 57/63 (90%)
Frame = -1 / -3
Query: 258 QMCLLSFTSILTSVVPMAFCANFLISLMALGAFFLNVQPWRRLWRLMVYSLVTTSSFLDA 79
QM LLSFTSILTSVVP+AFCANF SLMALGAFFL VQPWRRLWRL VYSLVTTSSFL A
Sbjct: 270 QMSLLSFTSILTSVVPIAFCANFRSSLMALGAFFLKVQPWRRLWRLTVYSLVTTSSFLGA 91
Query: 78 PPF 70
PPF
Sbjct: 90 PPF 82
Score = 34.5 bits (69), Expect(3) = 6e-038
Identities = 11/16 (68%), Positives = 12/16 (75%)
Frame = -2 / -1
Query: 335 WHPPHRSSCGRSSHEP 288
W PP SSCG+SS EP
Sbjct: 347 WRPPRHSSCGQSSREP 300
Score = 29.0 bits (57), Expect(3) = 6e-038
Identities = 12/14 (85%), Positives = 12/14 (85%)
Frame = -1 / -3
Query: 390 FKPSAGISATVTRE 349
FKPSAG SATVT E
Sbjct: 402 FKPSAGTSATVTSE 361
>gb|BU998633.1|BU998633 HI11L01r HI Hordeum vulgare subsp. vulgare cDNA clone HI11L01
5-PRIME, mRNA sequence
Length = 536
Score = 240 bits (518), Expect = 6e-063
Identities = 106/146 (72%), Positives = 117/146 (80%)
Frame = +2 / +1
Query: 59 MSQGKGGASRKEEVVTREYTINLHKRLHGCTFKKKAPNAIKEIRKFAQKAMGTTDVRIDV 238
M+ KGGA RKEEVVTREYT+NLHKRLHGCTFKKKAPNAIKE+RKFAQKAMGTTDVRIDV
Sbjct: 52 MADKKGGAPRKEEVVTREYTVNLHKRLHGCTFKKKAPNAIKELRKFAQKAMGTTDVRIDV 231
Query: 239 KLNKHIWSSGIXXXXXXXXXXXXXXXNDEEDAKEELYSLVTVAEIPAEGLKGLGTKVVDE 418
KLNK IWSSGI NDEEDAKEELYSLVTVAE+PAEGLKGLGTKVVD+
Sbjct: 232 KLNKLIWSSGIRSVPRRVRVRIARRRNDEEDAKEELYSLVTVAEVPAEGLKGLGTKVVDD 411
Query: 419 TD*AVAFSTSLESS*FVFATAKPFVS 496
T+* ++ ST LE + + T+ FVS
Sbjct: 412 TE*TLSLSTLLE*AVILHCTSMFFVS 489
Score = 142 bits (305), Expect = 1e-033
Identities = 64/135 (47%), Positives = 79/135 (58%)
Frame = -3 / -3
Query: 508 KNFLGYKRFCCCKYKLGTL*RCGERDSLIGFVNDLGPQPFQALGRDLRDGDKGVEFLLGI 329
K GYK+ + *+C R SL+ ++DLG QP Q L R L +GD+ VE LLG+
Sbjct: 501 KTSAGYKKHAGAMQNNSSF*QCR*RKSLLSVIDDLGSQPLQTLSRHLGNGDE*VELLLGV 322
Query: 328 LLIVPLAGDPHTNPPRHXXXXXXXDVLVELHIDPDVRGAHGLLCKLPDLLDGVGXXXXXX 149
LL++P AG+PH NP H D LVELH+DPDV AH LLCKLP+L DG+G
Sbjct: 321 LLVIPPAGNPHANPTGHASDPTAPDELVELHVDPDVCCAHSLLCKLPELFDGIGCLLLEG 142
Query: 148 XXXXXXXXVDGVLPG 104
VDGVLPG
Sbjct: 141 TAMEALVEVDGVLPG 97
Score = 134 bits (287), Expect = 4e-031
Identities = 66/123 (53%), Positives = 77/123 (62%)
Frame = +1 / +3
Query: 139 PRLHIQEEGTQRHQGDQEVCTEGHGHHGRQDRCEAQQAHLEQRDQERAAEGSCEDRPQEE 318
P L++QEEGTQ HQ EVCTEG+GH+ RQDR EAQQAHLEQ DQ+RA GS ED PQEE
Sbjct: 132 PWLYLQEEGTQCHQRAPEVCTEGYGHNRRQDRREAQQAHLEQWDQKRAP*GSREDCPQEE 311
Query: 319 R*GGCQGGTLLPCHRRGDPCRGLERAGDQGR*RNRLSCRVLHIFREFLVCICNSKTFCIQ 498
GG QGG LL HR C G E AG+QGR + + ++I R + FCI
Sbjct: 312 *RGGRQGGALLTRHRCRGAC*GFEGAGNQGRR*H*VDSFFIYIVRMSCYFALHQHVFCIL 491
Query: 499 GSF 507
F
Sbjct: 492 RKF 500
Score = 131 bits (281), Expect(3) = 6e-038
Identities = 56/63 (88%), Positives = 57/63 (90%)
Frame = -1 / -1
Query: 258 QMCLLSFTSILTSVVPMAFCANFLISLMALGAFFLNVQPWRRLWRLMVYSLVTTSSFLDA 79
QM LLSFTSILTSVVP+AFCANF SLMALGAFFL VQPWRRLWRL VYSLVTTSSFL A
Sbjct: 251 QMSLLSFTSILTSVVPIAFCANFRSSLMALGAFFLKVQPWRRLWRLTVYSLVTTSSFLGA 72
Query: 78 PPF 70
PPF
Sbjct: 71 PPF 63
Score = 34.5 bits (69), Expect(3) = 6e-038
Identities = 11/16 (68%), Positives = 12/16 (75%)
Frame = -2 / -2
Query: 335 WHPPHRSSCGRSSHEP 288
W PP SSCG+SS EP
Sbjct: 328 WRPPRHSSCGQSSREP 281
Score = 29.0 bits (57), Expect(3) = 6e-038
Identities = 12/14 (85%), Positives = 12/14 (85%)
Frame = -1 / -1
Query: 390 FKPSAGISATVTRE 349
FKPSAG SATVT E
Sbjct: 383 FKPSAGTSATVTSE 342
>gb|CB880123.1|CB880123 HM05J04w HM Hordeum vulgare subsp. vulgare cDNA clone HM05J04
3-PRIME, mRNA sequence
Length = 628
Score = 240 bits (518), Expect = 6e-063
Identities = 106/146 (72%), Positives = 117/146 (80%)
Frame = +2 / -3
Query: 59 MSQGKGGASRKEEVVTREYTINLHKRLHGCTFKKKAPNAIKEIRKFAQKAMGTTDVRIDV 238
M+ KGGA RKEEVVTREYT+NLHKRLHGCTFKKKAPNAIKE+RKFAQKAMGTTDVRIDV
Sbjct: 572 MADKKGGAPRKEEVVTREYTVNLHKRLHGCTFKKKAPNAIKELRKFAQKAMGTTDVRIDV 393
Query: 239 KLNKHIWSSGIXXXXXXXXXXXXXXXNDEEDAKEELYSLVTVAEIPAEGLKGLGTKVVDE 418
KLNK IWSSGI NDEEDAKEELYSLVTVAE+PAEGLKGLGTKVVD+
Sbjct: 392 KLNKLIWSSGIRSVPRRVRVRIARRRNDEEDAKEELYSLVTVAEVPAEGLKGLGTKVVDD 213
Query: 419 TD*AVAFSTSLESS*FVFATAKPFVS 496
T+* ++ ST LE + + T+ FVS
Sbjct: 212 TE*TLSLSTLLE*AVILHCTSMFFVS 135
Score = 142 bits (305), Expect = 1e-033
Identities = 64/135 (47%), Positives = 79/135 (58%)
Frame = -3 / +3
Query: 508 KNFLGYKRFCCCKYKLGTL*RCGERDSLIGFVNDLGPQPFQALGRDLRDGDKGVEFLLGI 329
K GYK+ + *+C R SL+ ++DLG QP Q L R L +GD+ VE LLG+
Sbjct: 123 KTSAGYKKHAGAMQNNSSF*QCR*RKSLLSVIDDLGSQPLQTLSRHLGNGDE*VELLLGV 302
Query: 328 LLIVPLAGDPHTNPPRHXXXXXXXDVLVELHIDPDVRGAHGLLCKLPDLLDGVGXXXXXX 149
LL++P AG+PH NP H D LVELH+DPDV AH LLCKLP+L DG+G
Sbjct: 303 LLVIPPAGNPHANPTGHASDPTAPDELVELHVDPDVCCAHSLLCKLPELFDGIGCLLLEG 482
Query: 148 XXXXXXXXVDGVLPG 104
VDGVLPG
Sbjct: 483 TAMEALVEVDGVLPG 527
Score = 134 bits (287), Expect = 4e-031
Identities = 66/123 (53%), Positives = 77/123 (62%)
Frame = +1 / -2
Query: 139 PRLHIQEEGTQRHQGDQEVCTEGHGHHGRQDRCEAQQAHLEQRDQERAAEGSCEDRPQEE 318
P L++QEEGTQ HQ EVCTEG+GH+ RQDR EAQQAHLEQ DQ+RA GS ED PQEE
Sbjct: 492 PWLYLQEEGTQCHQRAPEVCTEGYGHNRRQDRREAQQAHLEQWDQKRAP*GSREDCPQEE 313
Query: 319 R*GGCQGGTLLPCHRRGDPCRGLERAGDQGR*RNRLSCRVLHIFREFLVCICNSKTFCIQ 498
GG QGG LL HR C G E AG+QGR + + ++I R + FCI
Sbjct: 312 *RGGRQGGALLTRHRCRGAC*GFEGAGNQGRR*H*VDSFFIYIVRMSCYFALHQHVFCIL 133
Query: 499 GSF 507
F
Sbjct: 132 RKF 124
Score = 131 bits (281), Expect(3) = 6e-038
Identities = 56/63 (88%), Positives = 57/63 (90%)
Frame = -1 / +1
Query: 258 QMCLLSFTSILTSVVPMAFCANFLISLMALGAFFLNVQPWRRLWRLMVYSLVTTSSFLDA 79
QM LLSFTSILTSVVP+AFCANF SLMALGAFFL VQPWRRLWRL VYSLVTTSSFL A
Sbjct: 373 QMSLLSFTSILTSVVPIAFCANFRSSLMALGAFFLKVQPWRRLWRLTVYSLVTTSSFLGA 552
Query: 78 PPF 70
PPF
Sbjct: 553 PPF 561
Score = 34.5 bits (69), Expect(3) = 6e-038
Identities = 11/16 (68%), Positives = 12/16 (75%)
Frame = -2 / +2
Query: 335 WHPPHRSSCGRSSHEP 288
W PP SSCG+SS EP
Sbjct: 296 WRPPRHSSCGQSSREP 343
Score = 29.0 bits (57), Expect(3) = 6e-038
Identities = 12/14 (85%), Positives = 12/14 (85%)
Frame = -1 / +1
Query: 390 FKPSAGISATVTRE 349
FKPSAG SATVT E
Sbjct: 241 FKPSAGTSATVTSE 282
>gb|CK125679.1|CK125679 BES1824110a14 BES1824 Hordeum vulgare subsp. vulgare cDNA clone
MPMGp2010A1410 5-PRIME, mRNA sequence
Length = 590
Score = 240 bits (518), Expect = 6e-063
Identities = 106/146 (72%), Positives = 117/146 (80%)
Frame = +2 / +2
Query: 59 MSQGKGGASRKEEVVTREYTINLHKRLHGCTFKKKAPNAIKEIRKFAQKAMGTTDVRIDV 238
M+ KGGA RKEEVVTREYT+NLHKRLHGCTFKKKAPNAIKE+RKFAQKAMGTTDVRIDV
Sbjct: 65 MADKKGGAPRKEEVVTREYTVNLHKRLHGCTFKKKAPNAIKELRKFAQKAMGTTDVRIDV 244
Query: 239 KLNKHIWSSGIXXXXXXXXXXXXXXXNDEEDAKEELYSLVTVAEIPAEGLKGLGTKVVDE 418
KLNK IWSSGI NDEEDAKEELYSLVTVAE+PAEGLKGLGTKVVD+
Sbjct: 245 KLNKLIWSSGIRSVPRRVRVRIARRRNDEEDAKEELYSLVTVAEVPAEGLKGLGTKVVDD 424
Query: 419 TD*AVAFSTSLESS*FVFATAKPFVS 496
T+* ++ ST LE + + T+ FVS
Sbjct: 425 TE*TLSLSTLLE*AVILHCTSMFFVS 502
Score = 142 bits (305), Expect = 1e-033
Identities = 64/135 (47%), Positives = 79/135 (58%)
Frame = -3 / -2
Query: 508 KNFLGYKRFCCCKYKLGTL*RCGERDSLIGFVNDLGPQPFQALGRDLRDGDKGVEFLLGI 329
K GYK+ + *+C R SL+ ++DLG QP Q L R L +GD+ VE LLG+
Sbjct: 514 KTSAGYKKHAGAMQNNSSF*QCR*RKSLLSVIDDLGSQPLQTLSRHLGNGDE*VELLLGV 335
Query: 328 LLIVPLAGDPHTNPPRHXXXXXXXDVLVELHIDPDVRGAHGLLCKLPDLLDGVGXXXXXX 149
LL++P AG+PH NP H D LVELH+DPDV AH LLCKLP+L DG+G
Sbjct: 334 LLVIPPAGNPHANPTGHASDPTAPDELVELHVDPDVCCAHSLLCKLPELFDGIGCLLLEG 155
Query: 148 XXXXXXXXVDGVLPG 104
VDGVLPG
Sbjct: 154 TAMEALVEVDGVLPG 110
Score = 134 bits (287), Expect = 4e-031
Identities = 66/123 (53%), Positives = 77/123 (62%)
Frame = +1 / +1
Query: 139 PRLHIQEEGTQRHQGDQEVCTEGHGHHGRQDRCEAQQAHLEQRDQERAAEGSCEDRPQEE 318
P L++QEEGTQ HQ EVCTEG+GH+ RQDR EAQQAHLEQ DQ+RA GS ED PQEE
Sbjct: 145 PWLYLQEEGTQCHQRAPEVCTEGYGHNRRQDRREAQQAHLEQWDQKRAP*GSREDCPQEE 324
Query: 319 R*GGCQGGTLLPCHRRGDPCRGLERAGDQGR*RNRLSCRVLHIFREFLVCICNSKTFCIQ 498
GG QGG LL HR C G E AG+QGR + + ++I R + FCI
Sbjct: 325 *RGGRQGGALLTRHRCRGAC*GFEGAGNQGRR*H*VDSFFIYIVRMSCYFALHQHVFCIL 504
Query: 499 GSF 507
F
Sbjct: 505 RKF 513
Score = 131 bits (281), Expect(3) = 6e-038
Identities = 56/63 (88%), Positives = 57/63 (90%)
Frame = -1 / -3
Query: 258 QMCLLSFTSILTSVVPMAFCANFLISLMALGAFFLNVQPWRRLWRLMVYSLVTTSSFLDA 79
QM LLSFTSILTSVVP+AFCANF SLMALGAFFL VQPWRRLWRL VYSLVTTSSFL A
Sbjct: 264 QMSLLSFTSILTSVVPIAFCANFRSSLMALGAFFLKVQPWRRLWRLTVYSLVTTSSFLGA 85
Query: 78 PPF 70
PPF
Sbjct: 84 PPF 76
Score = 34.5 bits (69), Expect(3) = 6e-038
Identities = 11/16 (68%), Positives = 12/16 (75%)
Frame = -2 / -1
Query: 335 WHPPHRSSCGRSSHEP 288
W PP SSCG+SS EP
Sbjct: 341 WRPPRHSSCGQSSREP 294
Score = 29.0 bits (57), Expect(3) = 6e-038
Identities = 12/14 (85%), Positives = 12/14 (85%)
Frame = -1 / -3
Query: 390 FKPSAGISATVTRE 349
FKPSAG SATVT E
Sbjct: 396 FKPSAGTSATVTSE 355
>gb|BM377717.2|BM377717 EBem04_SQ004_A02_R embryo, 12 DPA, no treatment, cv Optic, EBem04
Hordeum vulgare subsp. vulgare cDNA clone
EBem04_SQ004_A02 5', mRNA sequence
Length = 585
Score = 239 bits (517), Expect = 8e-063
Identities = 106/146 (72%), Positives = 117/146 (80%)
Frame = +2 / +1
Query: 59 MSQGKGGASRKEEVVTREYTINLHKRLHGCTFKKKAPNAIKEIRKFAQKAMGTTDVRIDV 238
M+ KGGA RKEEVVTREYT+NLHKRLHGCTFKKKAPNAIKE+RKFAQKAMGTTDVRIDV
Sbjct: 61 MADKKGGAPRKEEVVTREYTVNLHKRLHGCTFKKKAPNAIKELRKFAQKAMGTTDVRIDV 240
Query: 239 KLNKHIWSSGIXXXXXXXXXXXXXXXNDEEDAKEELYSLVTVAEIPAEGLKGLGTKVVDE 418
KLNK IWSSGI NDEEDAKEELYSLVTVAE+PAEGLKGLGTKVVD+
Sbjct: 241 KLNKLIWSSGIRSVPRRVRVRIVRRRNDEEDAKEELYSLVTVAEVPAEGLKGLGTKVVDD 420
Query: 419 TD*AVAFSTSLESS*FVFATAKPFVS 496
T+* ++ ST LE + + T+ FVS
Sbjct: 421 TE*TLSLSTLLE*AVILHCTSMFFVS 498
Score = 139 bits (298), Expect = 1e-032
Identities = 63/135 (46%), Positives = 78/135 (57%)
Frame = -3 / -1
Query: 508 KNFLGYKRFCCCKYKLGTL*RCGERDSLIGFVNDLGPQPFQALGRDLRDGDKGVEFLLGI 329
K GYK+ + *+C R SL+ ++DLG QP Q L R L +GD+ VE LLG+
Sbjct: 510 KTSAGYKKHAGAMQNNSSF*QCR*RKSLLSVIDDLGSQPLQTLSRHLGNGDE*VELLLGV 331
Query: 328 LLIVPLAGDPHTNPPRHXXXXXXXDVLVELHIDPDVRGAHGLLCKLPDLLDGVGXXXXXX 149
LL++P A +PH NP H D LVELH+DPDV AH LLCKLP+L DG+G
Sbjct: 330 LLVIPPADNPHANPTGHASDPTAPDELVELHVDPDVCCAHSLLCKLPELFDGIGCLLLEG 151
Query: 148 XXXXXXXXVDGVLPG 104
VDGVLPG
Sbjct: 150 TAMEALVEVDGVLPG 106
Score = 134 bits (287), Expect = 4e-031
Identities = 66/123 (53%), Positives = 77/123 (62%)
Frame = +1 / +3
Query: 139 PRLHIQEEGTQRHQGDQEVCTEGHGHHGRQDRCEAQQAHLEQRDQERAAEGSCEDRPQEE 318
P L++QEEGTQ HQ EVCTEG+GH+ RQDR EAQQAHLEQ DQ+RA GS ED PQEE
Sbjct: 141 PWLYLQEEGTQCHQRAPEVCTEGYGHNRRQDRREAQQAHLEQWDQKRAP*GSREDCPQEE 320
Query: 319 R*GGCQGGTLLPCHRRGDPCRGLERAGDQGR*RNRLSCRVLHIFREFLVCICNSKTFCIQ 498
GG QGG LL HR C G E AG+QGR + + ++I R + FCI
Sbjct: 321 *RGGRQGGALLTRHRCRGAC*GFEGAGNQGRR*H*VDSFFIYIVRMSCYFALHQHVFCIL 500
Query: 499 GSF 507
F
Sbjct: 501 RKF 509
Score = 131 bits (281), Expect(3) = 6e-038
Identities = 56/63 (88%), Positives = 57/63 (90%)
Frame = -1 / -2
Query: 258 QMCLLSFTSILTSVVPMAFCANFLISLMALGAFFLNVQPWRRLWRLMVYSLVTTSSFLDA 79
QM LLSFTSILTSVVP+AFCANF SLMALGAFFL VQPWRRLWRL VYSLVTTSSFL A
Sbjct: 260 QMSLLSFTSILTSVVPIAFCANFRSSLMALGAFFLKVQPWRRLWRLTVYSLVTTSSFLGA 81
Query: 78 PPF 70
PPF
Sbjct: 80 PPF 72
Score = 34.5 bits (69), Expect(3) = 6e-038
Identities = 11/16 (68%), Positives = 12/16 (75%)
Frame = -2 / -3
Query: 335 WHPPHRSSCGRSSHEP 288
W PP SSCG+SS EP
Sbjct: 337 WRPPRHSSCGQSSREP 290
Score = 29.0 bits (57), Expect(3) = 6e-038
Identities = 12/14 (85%), Positives = 12/14 (85%)
Frame = -1 / -2
Query: 390 FKPSAGISATVTRE 349
FKPSAG SATVT E
Sbjct: 392 FKPSAGTSATVTSE 351
>gb|BU976460.1|BU976460 HA03M06r HA Hordeum vulgare subsp. vulgare cDNA clone HA03M06
5-PRIME, mRNA sequence
Length = 528
Score = 238 bits (514), Expect = 2e-062
Identities = 105/145 (72%), Positives = 116/145 (80%)
Frame = +2 / +3
Query: 59 MSQGKGGASRKEEVVTREYTINLHKRLHGCTFKKKAPNAIKEIRKFAQKAMGTTDVRIDV 238
M+ KGGA RKEEVVTREYT+NLHKRLHGCTFKKKAPNAIKE+RKFAQKAMGTTDVRIDV
Sbjct: 63 MADKKGGAPRKEEVVTREYTVNLHKRLHGCTFKKKAPNAIKELRKFAQKAMGTTDVRIDV 242
Query: 239 KLNKHIWSSGIXXXXXXXXXXXXXXXNDEEDAKEELYSLVTVAEIPAEGLKGLGTKVVDE 418
KLNK IWSSGI NDEEDAKEELYSLVTVAE+PAEGLKGLGTKVVD+
Sbjct: 243 KLNKLIWSSGIRSVPRRVRVRIARRRNDEEDAKEELYSLVTVAEVPAEGLKGLGTKVVDD 422
Query: 419 TD*AVAFSTSLESS*FVFATAKPFV 493
T+* ++ ST LE + + T+ FV
Sbjct: 423 TE*TLSLSTLLE*AVILHXTSMFFV 497
Score = 138 bits (295), Expect = 3e-032
Identities = 62/130 (47%), Positives = 77/130 (59%)
Frame = -3 / -2
Query: 493 YKRFCCCKYKLGTL*RCGERDSLIGFVNDLGPQPFQALGRDLRDGDKGVEFLLGILLIVP 314
YK+ + *+C R SL+ ++DLG QP Q L R L +GD+ VE LLG+LL++P
Sbjct: 497 YKKHAGXMQNNSSF*QCR*RKSLLSVIDDLGSQPLQTLSRHLGNGDE*VELLLGVLLVIP 318
Query: 313 LAGDPHTNPPRHXXXXXXXDVLVELHIDPDVRGAHGLLCKLPDLLDGVGXXXXXXXXXXX 134
AG+PH NP H D LVELH+DPDV AH LLCKLP+L DG+G
Sbjct: 317 PAGNPHANPTGHASDPTAPDELVELHVDPDVCCAHSLLCKLPELFDGIGCLLLEGTAMEA 138
Query: 133 XXXVDGVLPG 104
VDGVLPG
Sbjct: 137 LVEVDGVLPG 108
Score = 133 bits (285), Expect = 8e-031
Identities = 66/123 (53%), Positives = 76/123 (61%)
Frame = +1 / +2
Query: 139 PRLHIQEEGTQRHQGDQEVCTEGHGHHGRQDRCEAQQAHLEQRDQERAAEGSCEDRPQEE 318
P L++QEEGTQ HQ EVCTEG+GH+ RQDR EAQQAHLEQ DQ+RA GS ED PQEE
Sbjct: 143 PWLYLQEEGTQCHQRAPEVCTEGYGHNRRQDRREAQQAHLEQWDQKRAP*GSREDCPQEE 322
Query: 319 R*GGCQGGTLLPCHRRGDPCRGLERAGDQGR*RNRLSCRVLHIFREFLVCICNSKTFCIQ 498
GG QGG LL HR C G E AG+QGR + + ++I R FCI
Sbjct: 323 *RGGRQGGALLTRHRCRGAC*GFEGAGNQGRR*H*VDSFFIYIVRMSCYFALXQHVFCIL 502
Query: 499 GSF 507
F
Sbjct: 503 RKF 511
Score = 131 bits (281), Expect(3) = 6e-038
Identities = 56/63 (88%), Positives = 57/63 (90%)
Frame = -1 / -3
Query: 258 QMCLLSFTSILTSVVPMAFCANFLISLMALGAFFLNVQPWRRLWRLMVYSLVTTSSFLDA 79
QM LLSFTSILTSVVP+AFCANF SLMALGAFFL VQPWRRLWRL VYSLVTTSSFL A
Sbjct: 262 QMSLLSFTSILTSVVPIAFCANFRSSLMALGAFFLKVQPWRRLWRLTVYSLVTTSSFLGA 83
Query: 78 PPF 70
PPF
Sbjct: 82 PPF 74
Score = 34.5 bits (69), Expect(3) = 6e-038
Identities = 11/16 (68%), Positives = 12/16 (75%)
Frame = -2 / -1
Query: 335 WHPPHRSSCGRSSHEP 288
W PP SSCG+SS EP
Sbjct: 339 WRPPRHSSCGQSSREP 292
Score = 29.0 bits (57), Expect(3) = 6e-038
Identities = 12/14 (85%), Positives = 12/14 (85%)
Frame = -1 / -3
Query: 390 FKPSAGISATVTRE 349
FKPSAG SATVT E
Sbjct: 394 FKPSAGTSATVTSE 353
>gb|BI777726.2|BI777726 EBro08_SQ001_K06_R root, 3 week, drought-stressed, cv Optic, EBro08
Hordeum vulgare subsp. vulgare cDNA clone
EBro08_SQ001_K06 5', mRNA sequence
Length = 478
Score = 236 bits (510), Expect = 8e-062
Identities = 102/132 (77%), Positives = 110/132 (83%)
Frame = +2 / +1
Query: 59 MSQGKGGASRKEEVVTREYTINLHKRLHGCTFKKKAPNAIKEIRKFAQKAMGTTDVRIDV 238
M+ KGGA RKEEVVTREYT+NLHKRLHGCTFKKKAPNAIKE+RKFAQKAMGTTDVRIDV
Sbjct: 61 MADKKGGAPRKEEVVTREYTVNLHKRLHGCTFKKKAPNAIKELRKFAQKAMGTTDVRIDV 240
Query: 239 KLNKHIWSSGIXXXXXXXXXXXXXXXNDEEDAKEELYSLVTVAEIPAEGLKGLGTKVVDE 418
KLNK IWSSGI NDEEDAKEELYSLVTVAE+PAEGLKGLGTKVVD+
Sbjct: 241 KLNKLIWSSGIRSVPRRVRVRIARRRNDEEDAKEELYSLVTVAEVPAEGLKGLGTKVVDD 420
Query: 419 TD*AVAFSTSLE 454
T+* ++ ST LE
Sbjct: 421 TE*TLSLSTLLE 456
Score = 136 bits (292), Expect = 9e-032
Identities = 60/118 (50%), Positives = 74/118 (62%)
Frame = -3 / -2
Query: 457 TL*RCGERDSLIGFVNDLGPQPFQALGRDLRDGDKGVEFLLGILLIVPLAGDPHTNPPRH 278
+ *+C R SL+ ++DLG QP Q L R L +GD+ VE LLG+LL++P AG+PH NP H
Sbjct: 459 SF*QCR*RKSLLSVIDDLGSQPLQTLSRHLGNGDE*VELLLGVLLVIPPAGNPHANPTGH 280
Query: 277 XXXXXXXDVLVELHIDPDVRGAHGLLCKLPDLLDGVGXXXXXXXXXXXXXXVDGVLPG 104
D LVELH+DPDV AH LLCKLP+L DG+G VDGVLPG
Sbjct: 279 ASDPTAPDELVELHVDPDVCCAHSLLCKLPELFDGIGCLLLEGTAMEALVEVDGVLPG 106
Score = 131 bits (281), Expect(3) = 7e-038
Identities = 56/63 (88%), Positives = 57/63 (90%)
Frame = -1 / -3
Query: 258 QMCLLSFTSILTSVVPMAFCANFLISLMALGAFFLNVQPWRRLWRLMVYSLVTTSSFLDA 79
QM LLSFTSILTSVVP+AFCANF SLMALGAFFL VQPWRRLWRL VYSLVTTSSFL A
Sbjct: 260 QMSLLSFTSILTSVVPIAFCANFRSSLMALGAFFLKVQPWRRLWRLTVYSLVTTSSFLGA 81
Query: 78 PPF 70
PPF
Sbjct: 80 PPF 72
Score = 130 bits (279), Expect = 6e-030
Identities = 60/91 (65%), Positives = 66/91 (72%)
Frame = +1 / +3
Query: 139 PRLHIQEEGTQRHQGDQEVCTEGHGHHGRQDRCEAQQAHLEQRDQERAAEGSCEDRPQEE 318
P L++QEEGTQ HQ EVCTEG+GH+ RQDR EAQQAHLEQ DQ+RA GS ED PQEE
Sbjct: 141 PWLYLQEEGTQCHQRAPEVCTEGYGHNRRQDRREAQQAHLEQWDQKRAP*GSREDCPQEE 320
Query: 319 R*GGCQGGTLLPCHRRGDPCRGLERAGDQGR 411
GG QGG LL HR C G E AG+QGR
Sbjct: 321 *RGGRQGGALLTRHRCRGAC*GFEGAGNQGR 413
Score = 34.5 bits (69), Expect(3) = 7e-038
Identities = 11/16 (68%), Positives = 12/16 (75%)
Frame = -2 / -1
Query: 335 WHPPHRSSCGRSSHEP 288
W PP SSCG+SS EP
Sbjct: 337 WRPPRHSSCGQSSREP 290
Score = 29.0 bits (57), Expect(3) = 7e-038
Identities = 12/14 (85%), Positives = 12/14 (85%)
Frame = -1 / -3
Query: 390 FKPSAGISATVTRE 349
FKPSAG SATVT E
Sbjct: 392 FKPSAGTSATVTSE 351
>gb|BQ761674.1|BQ761674 EBem10_SQ001_C13_R embryo, 2 Day germination, no treatment, cv
Optic, EBem10 Hordeum vulgare subsp. vulgare cDNA clone
EBem10_SQ001_C13 5', mRNA sequence
Length = 470
Score = 236 bits (510), Expect = 8e-062
Identities = 102/132 (77%), Positives = 110/132 (83%)
Frame = +2 / +2
Query: 59 MSQGKGGASRKEEVVTREYTINLHKRLHGCTFKKKAPNAIKEIRKFAQKAMGTTDVRIDV 238
M+ KGGA RKEEVVTREYT+NLHKRLHGCTFKKKAPNAIKE+RKFAQKAMGTTDVRIDV
Sbjct: 38 MADKKGGAPRKEEVVTREYTVNLHKRLHGCTFKKKAPNAIKELRKFAQKAMGTTDVRIDV 217
Query: 239 KLNKHIWSSGIXXXXXXXXXXXXXXXNDEEDAKEELYSLVTVAEIPAEGLKGLGTKVVDE 418
KLNK IWSSGI NDEEDAKEELYSLVTVAE+PAEGLKGLGTKVVD+
Sbjct: 218 KLNKLIWSSGIRSVPRRVRVRIARRRNDEEDAKEELYSLVTVAEVPAEGLKGLGTKVVDD 397
Query: 419 TD*AVAFSTSLE 454
T+* ++ ST LE
Sbjct: 398 TE*TLSLSTLLE 433
Score = 136 bits (292), Expect = 9e-032
Identities = 60/118 (50%), Positives = 74/118 (62%)
Frame = -3 / -2
Query: 457 TL*RCGERDSLIGFVNDLGPQPFQALGRDLRDGDKGVEFLLGILLIVPLAGDPHTNPPRH 278
+ *+C R SL+ ++DLG QP Q L R L +GD+ VE LLG+LL++P AG+PH NP H
Sbjct: 436 SF*QCR*RKSLLSVIDDLGSQPLQTLSRHLGNGDE*VELLLGVLLVIPPAGNPHANPTGH 257
Query: 277 XXXXXXXDVLVELHIDPDVRGAHGLLCKLPDLLDGVGXXXXXXXXXXXXXXVDGVLPG 104
D LVELH+DPDV AH LLCKLP+L DG+G VDGVLPG
Sbjct: 256 ASDPTAPDELVELHVDPDVCCAHSLLCKLPELFDGIGCLLLEGTAMEALVEVDGVLPG 83
Score = 131 bits (281), Expect(3) = 7e-038
Identities = 56/63 (88%), Positives = 57/63 (90%)
Frame = -1 / -3
Query: 258 QMCLLSFTSILTSVVPMAFCANFLISLMALGAFFLNVQPWRRLWRLMVYSLVTTSSFLDA 79
QM LLSFTSILTSVVP+AFCANF SLMALGAFFL VQPWRRLWRL VYSLVTTSSFL A
Sbjct: 237 QMSLLSFTSILTSVVPIAFCANFRSSLMALGAFFLKVQPWRRLWRLTVYSLVTTSSFLGA 58
Query: 78 PPF 70
PPF
Sbjct: 57 PPF 49
Score = 130 bits (279), Expect = 6e-030
Identities = 60/91 (65%), Positives = 66/91 (72%)
Frame = +1 / +1
Query: 139 PRLHIQEEGTQRHQGDQEVCTEGHGHHGRQDRCEAQQAHLEQRDQERAAEGSCEDRPQEE 318
P L++QEEGTQ HQ EVCTEG+GH+ RQDR EAQQAHLEQ DQ+RA GS ED PQEE
Sbjct: 118 PWLYLQEEGTQCHQRAPEVCTEGYGHNRRQDRREAQQAHLEQWDQKRAP*GSREDCPQEE 297
Query: 319 R*GGCQGGTLLPCHRRGDPCRGLERAGDQGR 411
GG QGG LL HR C G E AG+QGR
Sbjct: 298 *RGGRQGGALLTRHRCRGAC*GFEGAGNQGR 390
Score = 34.5 bits (69), Expect(3) = 7e-038
Identities = 11/16 (68%), Positives = 12/16 (75%)
Frame = -2 / -1
Query: 335 WHPPHRSSCGRSSHEP 288
W PP SSCG+SS EP
Sbjct: 314 WRPPRHSSCGQSSREP 267
Score = 29.0 bits (57), Expect(3) = 7e-038
Identities = 12/14 (85%), Positives = 12/14 (85%)
Frame = -1 / -3
Query: 390 FKPSAGISATVTRE 349
FKPSAG SATVT E
Sbjct: 369 FKPSAGTSATVTSE 328
>gb|BU995255.1|BU995255 HM09K24r HM Hordeum vulgare subsp. vulgare cDNA clone HM09K24
5-PRIME, mRNA sequence
Length = 481
Score = 236 bits (510), Expect = 8e-062
Identities = 102/132 (77%), Positives = 110/132 (83%)
Frame = +2 / +1
Query: 59 MSQGKGGASRKEEVVTREYTINLHKRLHGCTFKKKAPNAIKEIRKFAQKAMGTTDVRIDV 238
M+ KGGA RKEEVVTREYT+NLHKRLHGCTFKKKAPNAIKE+RKFAQKAMGTTDVRIDV
Sbjct: 70 MADKKGGAPRKEEVVTREYTVNLHKRLHGCTFKKKAPNAIKELRKFAQKAMGTTDVRIDV 249
Query: 239 KLNKHIWSSGIXXXXXXXXXXXXXXXNDEEDAKEELYSLVTVAEIPAEGLKGLGTKVVDE 418
KLNK IWSSGI NDEEDAKEELYSLVTVAE+PAEGLKGLGTKVVD+
Sbjct: 250 KLNKLIWSSGIRSVPRRVRVRIARRRNDEEDAKEELYSLVTVAEVPAEGLKGLGTKVVDD 429
Query: 419 TD*AVAFSTSLE 454
T+* ++ ST LE
Sbjct: 430 TE*TLSLSTLLE 465
Score = 136 bits (292), Expect = 9e-032
Identities = 60/118 (50%), Positives = 74/118 (62%)
Frame = -3 / -2
Query: 457 TL*RCGERDSLIGFVNDLGPQPFQALGRDLRDGDKGVEFLLGILLIVPLAGDPHTNPPRH 278
+ *+C R SL+ ++DLG QP Q L R L +GD+ VE LLG+LL++P AG+PH NP H
Sbjct: 468 SF*QCR*RKSLLSVIDDLGSQPLQTLSRHLGNGDE*VELLLGVLLVIPPAGNPHANPTGH 289
Query: 277 XXXXXXXDVLVELHIDPDVRGAHGLLCKLPDLLDGVGXXXXXXXXXXXXXXVDGVLPG 104
D LVELH+DPDV AH LLCKLP+L DG+G VDGVLPG
Sbjct: 288 ASDPTAPDELVELHVDPDVCCAHSLLCKLPELFDGIGCLLLEGTAMEALVEVDGVLPG 115
Score = 131 bits (281), Expect(3) = 6e-038
Identities = 56/63 (88%), Positives = 57/63 (90%)
Frame = -1 / -3
Query: 258 QMCLLSFTSILTSVVPMAFCANFLISLMALGAFFLNVQPWRRLWRLMVYSLVTTSSFLDA 79
QM LLSFTSILTSVVP+AFCANF SLMALGAFFL VQPWRRLWRL VYSLVTTSSFL A
Sbjct: 269 QMSLLSFTSILTSVVPIAFCANFRSSLMALGAFFLKVQPWRRLWRLTVYSLVTTSSFLGA 90
Query: 78 PPF 70
PPF
Sbjct: 89 PPF 81
Score = 130 bits (279), Expect = 6e-030
Identities = 60/91 (65%), Positives = 66/91 (72%)
Frame = +1 / +3
Query: 139 PRLHIQEEGTQRHQGDQEVCTEGHGHHGRQDRCEAQQAHLEQRDQERAAEGSCEDRPQEE 318
P L++QEEGTQ HQ EVCTEG+GH+ RQDR EAQQAHLEQ DQ+RA GS ED PQEE
Sbjct: 150 PWLYLQEEGTQCHQRAPEVCTEGYGHNRRQDRREAQQAHLEQWDQKRAP*GSREDCPQEE 329
Query: 319 R*GGCQGGTLLPCHRRGDPCRGLERAGDQGR 411
GG QGG LL HR C G E AG+QGR
Sbjct: 330 *RGGRQGGALLTRHRCRGAC*GFEGAGNQGR 422
Score = 34.5 bits (69), Expect(3) = 6e-038
Identities = 11/16 (68%), Positives = 12/16 (75%)
Frame = -2 / -1
Query: 335 WHPPHRSSCGRSSHEP 288
W PP SSCG+SS EP
Sbjct: 346 WRPPRHSSCGQSSREP 299
Score = 29.0 bits (57), Expect(3) = 6e-038
Identities = 12/14 (85%), Positives = 12/14 (85%)
Frame = -1 / -3
Query: 390 FKPSAGISATVTRE 349
FKPSAG SATVT E
Sbjct: 401 FKPSAGTSATVTSE 360
>gb|CA021690.1|CA021690 HZ40N02r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ40N02
5-PRIME, mRNA sequence
Length = 493
Score = 236 bits (510), Expect = 8e-062
Identities = 102/132 (77%), Positives = 110/132 (83%)
Frame = +2 / +2
Query: 59 MSQGKGGASRKEEVVTREYTINLHKRLHGCTFKKKAPNAIKEIRKFAQKAMGTTDVRIDV 238
M+ KGGA RKEEVVTREYT+NLHKRLHGCTFKKKAPNAIKE+RKFAQKAMGTTDVRIDV
Sbjct: 65 MADKKGGAPRKEEVVTREYTVNLHKRLHGCTFKKKAPNAIKELRKFAQKAMGTTDVRIDV 244
Query: 239 KLNKHIWSSGIXXXXXXXXXXXXXXXNDEEDAKEELYSLVTVAEIPAEGLKGLGTKVVDE 418
KLNK IWSSGI NDEEDAKEELYSLVTVAE+PAEGLKGLGTKVVD+
Sbjct: 245 KLNKLIWSSGIRSVPRRVRVRIARRRNDEEDAKEELYSLVTVAEVPAEGLKGLGTKVVDD 424
Query: 419 TD*AVAFSTSLE 454
T+* ++ ST LE
Sbjct: 425 TE*TLSLSTLLE 460
Score = 136 bits (292), Expect = 9e-032
Identities = 60/118 (50%), Positives = 74/118 (62%)
Frame = -3 / -1
Query: 457 TL*RCGERDSLIGFVNDLGPQPFQALGRDLRDGDKGVEFLLGILLIVPLAGDPHTNPPRH 278
+ *+C R SL+ ++DLG QP Q L R L +GD+ VE LLG+LL++P AG+PH NP H
Sbjct: 463 SF*QCR*RKSLLSVIDDLGSQPLQTLSRHLGNGDE*VELLLGVLLVIPPAGNPHANPTGH 284
Query: 277 XXXXXXXDVLVELHIDPDVRGAHGLLCKLPDLLDGVGXXXXXXXXXXXXXXVDGVLPG 104
D LVELH+DPDV AH LLCKLP+L DG+G VDGVLPG
Sbjct: 283 ASDPTAPDELVELHVDPDVCCAHSLLCKLPELFDGIGCLLLEGTAMEALVEVDGVLPG 110
Score = 131 bits (281), Expect(3) = 6e-038
Identities = 56/63 (88%), Positives = 57/63 (90%)
Frame = -1 / -2
Query: 258 QMCLLSFTSILTSVVPMAFCANFLISLMALGAFFLNVQPWRRLWRLMVYSLVTTSSFLDA 79
QM LLSFTSILTSVVP+AFCANF SLMALGAFFL VQPWRRLWRL VYSLVTTSSFL A
Sbjct: 264 QMSLLSFTSILTSVVPIAFCANFRSSLMALGAFFLKVQPWRRLWRLTVYSLVTTSSFLGA 85
Query: 78 PPF 70
PPF
Sbjct: 84 PPF 76
Score = 130 bits (279), Expect = 6e-030
Identities = 60/91 (65%), Positives = 66/91 (72%)
Frame = +1 / +1
Query: 139 PRLHIQEEGTQRHQGDQEVCTEGHGHHGRQDRCEAQQAHLEQRDQERAAEGSCEDRPQEE 318
P L++QEEGTQ HQ EVCTEG+GH+ RQDR EAQQAHLEQ DQ+RA GS ED PQEE
Sbjct: 145 PWLYLQEEGTQCHQRAPEVCTEGYGHNRRQDRREAQQAHLEQWDQKRAP*GSREDCPQEE 324
Query: 319 R*GGCQGGTLLPCHRRGDPCRGLERAGDQGR 411
GG QGG LL HR C G E AG+QGR
Sbjct: 325 *RGGRQGGALLTRHRCRGAC*GFEGAGNQGR 417
Score = 34.5 bits (69), Expect(3) = 6e-038
Identities = 11/16 (68%), Positives = 12/16 (75%)
Frame = -2 / -3
Query: 335 WHPPHRSSCGRSSHEP 288
W PP SSCG+SS EP
Sbjct: 341 WRPPRHSSCGQSSREP 294
Score = 29.0 bits (57), Expect(3) = 6e-038
Identities = 12/14 (85%), Positives = 12/14 (85%)
Frame = -1 / -2
Query: 390 FKPSAGISATVTRE 349
FKPSAG SATVT E
Sbjct: 396 FKPSAGTSATVTSE 355
>gb|CA028156.1|CA028156 HZ61C15r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ61C15
5-PRIME, mRNA sequence
Length = 509
Score = 236 bits (510), Expect = 8e-062
Identities = 102/132 (77%), Positives = 110/132 (83%)
Frame = +2 / +1
Query: 59 MSQGKGGASRKEEVVTREYTINLHKRLHGCTFKKKAPNAIKEIRKFAQKAMGTTDVRIDV 238
M+ KGGA RKEEVVTREYT+NLHKRLHGCTFKKKAPNAIKE+RKFAQKAMGTTDVRIDV
Sbjct: 88 MADKKGGAPRKEEVVTREYTVNLHKRLHGCTFKKKAPNAIKELRKFAQKAMGTTDVRIDV 267
Query: 239 KLNKHIWSSGIXXXXXXXXXXXXXXXNDEEDAKEELYSLVTVAEIPAEGLKGLGTKVVDE 418
KLNK IWSSGI NDEEDAKEELYSLVTVAE+PAEGLKGLGTKVVD+
Sbjct: 268 KLNKLIWSSGIRSVPRRVRVRIARRRNDEEDAKEELYSLVTVAEVPAEGLKGLGTKVVDD 447
Query: 419 TD*AVAFSTSLE 454
T+* ++ ST LE
Sbjct: 448 TE*TLSLSTLLE 483
Score = 136 bits (292), Expect = 9e-032
Identities = 60/118 (50%), Positives = 74/118 (62%)
Frame = -3 / -3
Query: 457 TL*RCGERDSLIGFVNDLGPQPFQALGRDLRDGDKGVEFLLGILLIVPLAGDPHTNPPRH 278
+ *+C R SL+ ++DLG QP Q L R L +GD+ VE LLG+LL++P AG+PH NP H
Sbjct: 486 SF*QCR*RKSLLSVIDDLGSQPLQTLSRHLGNGDE*VELLLGVLLVIPPAGNPHANPTGH 307
Query: 277 XXXXXXXDVLVELHIDPDVRGAHGLLCKLPDLLDGVGXXXXXXXXXXXXXXVDGVLPG 104
D LVELH+DPDV AH LLCKLP+L DG+G VDGVLPG
Sbjct: 306 ASDPTAPDELVELHVDPDVCCAHSLLCKLPELFDGIGCLLLEGTAMEALVEVDGVLPG 133
Score = 131 bits (281), Expect(3) = 6e-038
Identities = 56/63 (88%), Positives = 57/63 (90%)
Frame = -1 / -1
Query: 258 QMCLLSFTSILTSVVPMAFCANFLISLMALGAFFLNVQPWRRLWRLMVYSLVTTSSFLDA 79
QM LLSFTSILTSVVP+AFCANF SLMALGAFFL VQPWRRLWRL VYSLVTTSSFL A
Sbjct: 287 QMSLLSFTSILTSVVPIAFCANFRSSLMALGAFFLKVQPWRRLWRLTVYSLVTTSSFLGA 108
Query: 78 PPF 70
PPF
Sbjct: 107 PPF 99
Score = 130 bits (279), Expect = 6e-030
Identities = 60/91 (65%), Positives = 66/91 (72%)
Frame = +1 / +3
Query: 139 PRLHIQEEGTQRHQGDQEVCTEGHGHHGRQDRCEAQQAHLEQRDQERAAEGSCEDRPQEE 318
P L++QEEGTQ HQ EVCTEG+GH+ RQDR EAQQAHLEQ DQ+RA GS ED PQEE
Sbjct: 168 PWLYLQEEGTQCHQRAPEVCTEGYGHNRRQDRREAQQAHLEQWDQKRAP*GSREDCPQEE 347
Query: 319 R*GGCQGGTLLPCHRRGDPCRGLERAGDQGR 411
GG QGG LL HR C G E AG+QGR
Sbjct: 348 *RGGRQGGALLTRHRCRGAC*GFEGAGNQGR 440
Score = 34.5 bits (69), Expect(3) = 6e-038
Identities = 11/16 (68%), Positives = 12/16 (75%)
Frame = -2 / -2
Query: 335 WHPPHRSSCGRSSHEP 288
W PP SSCG+SS EP
Sbjct: 364 WRPPRHSSCGQSSREP 317
Score = 29.0 bits (57), Expect(3) = 6e-038
Identities = 12/14 (85%), Positives = 12/14 (85%)
Frame = -1 / -1
Query: 390 FKPSAGISATVTRE 349
FKPSAG SATVT E
Sbjct: 419 FKPSAGTSATVTSE 378
>gb|BM375980.2|BM375980 EBem06_SQ004_P12_R embryo, 21 DPA, no treatment, cv Optic, EBem06
Hordeum vulgare subsp. vulgare cDNA clone
EBem06_SQ004_P12 5', mRNA sequence
Length = 491
Score = 234 bits (505), Expect = 4e-061
Identities = 101/132 (76%), Positives = 109/132 (82%)
Frame = +2 / +2
Query: 59 MSQGKGGASRKEEVVTREYTINLHKRLHGCTFKKKAPNAIKEIRKFAQKAMGTTDVRIDV 238
M+ KGGA RKEEVVTREYT+NLHKRLHGCTFKKKAPNAIKE+RKFAQKAMGTTDVRIDV
Sbjct: 59 MADKKGGAPRKEEVVTREYTVNLHKRLHGCTFKKKAPNAIKELRKFAQKAMGTTDVRIDV 238
Query: 239 KLNKHIWSSGIXXXXXXXXXXXXXXXNDEEDAKEELYSLVTVAEIPAEGLKGLGTKVVDE 418
KLNK IWSSGI NDEEDAKEELYSLVTVAE+PAEGLKGLGT VVD+
Sbjct: 239 KLNKLIWSSGIRSVPRKVRVRIARRRNDEEDAKEELYSLVTVAEVPAEGLKGLGTNVVDD 418
Query: 419 TD*AVAFSTSLE 454
T+* ++ ST LE
Sbjct: 419 TE*TLSLSTLLE 454
Score = 131 bits (281), Expect(3) = 6e-038
Identities = 56/63 (88%), Positives = 57/63 (90%)
Frame = -1 / -3
Query: 258 QMCLLSFTSILTSVVPMAFCANFLISLMALGAFFLNVQPWRRLWRLMVYSLVTTSSFLDA 79
QM LLSFTSILTSVVP+AFCANF SLMALGAFFL VQPWRRLWRL VYSLVTTSSFL A
Sbjct: 258 QMSLLSFTSILTSVVPIAFCANFRSSLMALGAFFLKVQPWRRLWRLTVYSLVTTSSFLGA 79
Query: 78 PPF 70
PPF
Sbjct: 78 PPF 70
Score = 131 bits (280), Expect = 4e-030
Identities = 58/118 (49%), Positives = 73/118 (61%)
Frame = -3 / -2
Query: 457 TL*RCGERDSLIGFVNDLGPQPFQALGRDLRDGDKGVEFLLGILLIVPLAGDPHTNPPRH 278
+ *+C R SL+ ++D+G QP Q L R L +GD+ VE LLG+LL++P AG+PH N H
Sbjct: 457 SF*QCR*RKSLLSVIDDIGSQPLQTLSRHLGNGDE*VELLLGVLLVIPPAGNPHANLTGH 278
Query: 277 XXXXXXXDVLVELHIDPDVRGAHGLLCKLPDLLDGVGXXXXXXXXXXXXXXVDGVLPG 104
D LVELH+DPDV AH LLCKLP+L DG+G VDGVLPG
Sbjct: 277 ASDPTAPDELVELHVDPDVCCAHSLLCKLPELFDGIGCLLLEGTAMEALVEVDGVLPG 104
Score = 126 bits (270), Expect = 1e-028
Identities = 59/91 (64%), Positives = 65/91 (71%)
Frame = +1 / +1
Query: 139 PRLHIQEEGTQRHQGDQEVCTEGHGHHGRQDRCEAQQAHLEQRDQERAAEGSCEDRPQEE 318
P L++QEEGTQ HQ EVCTEG+GH+ RQDR EAQQAHLEQ DQ+RA GS ED PQEE
Sbjct: 139 PWLYLQEEGTQCHQRAPEVCTEGYGHNRRQDRREAQQAHLEQWDQKRAP*GSREDCPQEE 318
Query: 319 R*GGCQGGTLLPCHRRGDPCRGLERAGDQGR 411
GG QGG LL HR C G E AG+Q R
Sbjct: 319 *RGGRQGGALLTRHRCRGAC*GFEGAGNQCR 411
Score = 34.5 bits (69), Expect(3) = 6e-038
Identities = 11/16 (68%), Positives = 12/16 (75%)
Frame = -2 / -1
Query: 335 WHPPHRSSCGRSSHEP 288
W PP SSCG+SS EP
Sbjct: 335 WRPPRHSSCGQSSREP 288
Score = 29.0 bits (57), Expect(3) = 6e-038
Identities = 12/14 (85%), Positives = 12/14 (85%)
Frame = -1 / -3
Query: 390 FKPSAGISATVTRE 349
FKPSAG SATVT E
Sbjct: 390 FKPSAGTSATVTSE 349
>gb|CB881396.1|CB881396 HM09K24w HM Hordeum vulgare subsp. vulgare cDNA clone HM09K24
3-PRIME, mRNA sequence
Length = 552
Score = 230 bits (497), Expect = 5e-060
Identities = 102/139 (73%), Positives = 112/139 (80%)
Frame = +2 / -2
Query: 80 ASRKEEVVTREYTINLHKRLHGCTFKKKAPNAIKEIRKFAQKAMGTTDVRIDVKLNKHIW 259
A RKEEVVTREYT+NLHKRLHGCTFKKKAPNAIKE+RKFAQKAMGTTDVRIDVKLNK IW
Sbjct: 551 APRKEEVVTREYTVNLHKRLHGCTFKKKAPNAIKELRKFAQKAMGTTDVRIDVKLNKLIW 372
Query: 260 SSGIXXXXXXXXXXXXXXXNDEEDAKEELYSLVTVAEIPAEGLKGLGTKVVDETD*AVAF 439
SSGI NDEEDAKEELYSLVTVAE+PAEGLKGLGTKVVD+T+* ++
Sbjct: 371 SSGIRSVPRRVRVRIARRRNDEEDAKEELYSLVTVAEVPAEGLKGLGTKVVDDTE*TLSL 192
Query: 440 STSLESS*FVFATAKPFVS 496
ST LE + + T+ FVS
Sbjct: 191 STLLE*AVILHCTSMFFVS 135
Score = 142 bits (305), Expect = 1e-033
Identities = 64/135 (47%), Positives = 79/135 (58%)
Frame = -3 / +3
Query: 508 KNFLGYKRFCCCKYKLGTL*RCGERDSLIGFVNDLGPQPFQALGRDLRDGDKGVEFLLGI 329
K GYK+ + *+C R SL+ ++DLG QP Q L R L +GD+ VE LLG+
Sbjct: 123 KTSAGYKKHAGAMQNNSSF*QCR*RKSLLSVIDDLGSQPLQTLSRHLGNGDE*VELLLGV 302
Query: 328 LLIVPLAGDPHTNPPRHXXXXXXXDVLVELHIDPDVRGAHGLLCKLPDLLDGVGXXXXXX 149
LL++P AG+PH NP H D LVELH+DPDV AH LLCKLP+L DG+G
Sbjct: 303 LLVIPPAGNPHANPTGHASDPTAPDELVELHVDPDVCCAHSLLCKLPELFDGIGCLLLEG 482
Query: 148 XXXXXXXXVDGVLPG 104
VDGVLPG
Sbjct: 483 TAMEALVEVDGVLPG 527
Score = 134 bits (287), Expect = 4e-031
Identities = 66/123 (53%), Positives = 77/123 (62%)
Frame = +1 / -1
Query: 139 PRLHIQEEGTQRHQGDQEVCTEGHGHHGRQDRCEAQQAHLEQRDQERAAEGSCEDRPQEE 318
P L++QEEGTQ HQ EVCTEG+GH+ RQDR EAQQAHLEQ DQ+RA GS ED PQEE
Sbjct: 492 PWLYLQEEGTQCHQRAPEVCTEGYGHNRRQDRREAQQAHLEQWDQKRAP*GSREDCPQEE 313
Query: 319 R*GGCQGGTLLPCHRRGDPCRGLERAGDQGR*RNRLSCRVLHIFREFLVCICNSKTFCIQ 498
GG QGG LL HR C G E AG+QGR + + ++I R + FCI
Sbjct: 312 *RGGRQGGALLTRHRCRGAC*GFEGAGNQGRR*H*VDSFFIYIVRMSCYFALHQHVFCIL 133
Query: 499 GSF 507
F
Sbjct: 132 RKF 124
Score = 122 bits (261), Expect(3) = 9e-035
Identities = 53/60 (88%), Positives = 54/60 (90%)
Frame = -1 / +1
Query: 258 QMCLLSFTSILTSVVPMAFCANFLISLMALGAFFLNVQPWRRLWRLMVYSLVTTSSFLDA 79
QM LLSFTSILTSVVP+AFCANF SLMALGAFFL VQPWRRLWRL VYSLVTTSSFL A
Sbjct: 373 QMSLLSFTSILTSVVPIAFCANFRSSLMALGAFFLKVQPWRRLWRLTVYSLVTTSSFLGA 552
Score = 34.5 bits (69), Expect(3) = 9e-035
Identities = 11/16 (68%), Positives = 12/16 (75%)
Frame = -2 / +2
Query: 335 WHPPHRSSCGRSSHEP 288
W PP SSCG+SS EP
Sbjct: 296 WRPPRHSSCGQSSREP 343
Score = 29.0 bits (57), Expect(3) = 9e-035
Identities = 12/14 (85%), Positives = 12/14 (85%)
Frame = -1 / +1
Query: 390 FKPSAGISATVTRE 349
FKPSAG SATVT E
Sbjct: 241 FKPSAGTSATVTSE 282
>gb|BU980716.1|BU980716 HA21H15r HA Hordeum vulgare subsp. vulgare cDNA clone HA21H15
5-PRIME, mRNA sequence
Length = 433
Score = 227 bits (491), Expect = 3e-059
Identities = 97/122 (79%), Positives = 103/122 (84%)
Frame = +2 / +1
Query: 59 MSQGKGGASRKEEVVTREYTINLHKRLHGCTFKKKAPNAIKEIRKFAQKAMGTTDVRIDV 238
M+ KGGA RKEEVVTREYT+NLHKRLHGCTFKKKAPNAIKE+RKFAQKAMGTTDVRIDV
Sbjct: 67 MADKKGGAPRKEEVVTREYTVNLHKRLHGCTFKKKAPNAIKELRKFAQKAMGTTDVRIDV 246
Query: 239 KLNKHIWSSGIXXXXXXXXXXXXXXXNDEEDAKEELYSLVTVAEIPAEGLKGLGTKVVDE 418
KLNK IWSSGI NDEEDAKEELYSLVTVAE+PAEGLKGLGTKVVD+
Sbjct: 247 KLNKLIWSSGIRSVPRRVRVRIARRRNDEEDAKEELYSLVTVAEVPAEGLKGLGTKVVDD 426
Query: 419 TD 424
T+
Sbjct: 427 TE 432
Score = 131 bits (281), Expect(3) = 7e-038
Identities = 56/63 (88%), Positives = 57/63 (90%)
Frame = -1 / -3
Query: 258 QMCLLSFTSILTSVVPMAFCANFLISLMALGAFFLNVQPWRRLWRLMVYSLVTTSSFLDA 79
QM LLSFTSILTSVVP+AFCANF SLMALGAFFL VQPWRRLWRL VYSLVTTSSFL A
Sbjct: 266 QMSLLSFTSILTSVVPIAFCANFRSSLMALGAFFLKVQPWRRLWRLTVYSLVTTSSFLGA 87
Query: 78 PPF 70
PPF
Sbjct: 86 PPF 78
Score = 130 bits (279), Expect = 6e-030
Identities = 60/91 (65%), Positives = 66/91 (72%)
Frame = +1 / +3
Query: 139 PRLHIQEEGTQRHQGDQEVCTEGHGHHGRQDRCEAQQAHLEQRDQERAAEGSCEDRPQEE 318
P L++QEEGTQ HQ EVCTEG+GH+ RQDR EAQQAHLEQ DQ+RA GS ED PQEE
Sbjct: 147 PWLYLQEEGTQCHQRAPEVCTEGYGHNRRQDRREAQQAHLEQWDQKRAP*GSREDCPQEE 326
Query: 319 R*GGCQGGTLLPCHRRGDPCRGLERAGDQGR 411
GG QGG LL HR C G E AG+QGR
Sbjct: 327 *RGGRQGGALLTRHRCRGAC*GFEGAGNQGR 419
Score = 128 bits (274), Expect = 3e-029
Identities = 55/107 (51%), Positives = 67/107 (62%)
Frame = -3 / -2
Query: 424 IGFVNDLGPQPFQALGRDLRDGDKGVEFLLGILLIVPLAGDPHTNPPRHXXXXXXXDVLV 245
+ ++DLG QP Q L R L +GD+ VE LLG+LL++P AG+PH NP H D LV
Sbjct: 432 LSVIDDLGSQPLQTLSRHLGNGDE*VELLLGVLLVIPPAGNPHANPTGHASDPTAPDELV 253
Query: 244 ELHIDPDVRGAHGLLCKLPDLLDGVGXXXXXXXXXXXXXXVDGVLPG 104
ELH+DPDV AH LLCKLP+L DG+G VDGVLPG
Sbjct: 252 ELHVDPDVCCAHSLLCKLPELFDGIGCLLLEGTAMEALVEVDGVLPG 112
Score = 34.5 bits (69), Expect(3) = 7e-038
Identities = 11/16 (68%), Positives = 12/16 (75%)
Frame = -2 / -1
Query: 335 WHPPHRSSCGRSSHEP 288
W PP SSCG+SS EP
Sbjct: 343 WRPPRHSSCGQSSREP 296
Score = 29.0 bits (57), Expect(3) = 7e-038
Identities = 12/14 (85%), Positives = 12/14 (85%)
Frame = -1 / -3
Query: 390 FKPSAGISATVTRE 349
FKPSAG SATVT E
Sbjct: 398 FKPSAGTSATVTSE 357
>gb|BE231184.1|BE231184 HVSMEg0017G24f Hordeum vulgare pre-anthesis spike EST library
HVcDNA0008 (white to yellow anther) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEg0017G24f, mRNA sequence
Length = 904
Score = 226 bits (489), Expect = 6e-059
Identities = 98/128 (76%), Positives = 107/128 (83%)
Frame = +2 / +3
Query: 71 KGGASRKEEVVTREYTINLHKRLHGCTFKKKAPNAIKEIRKFAQKAMGTTDVRIDVKLNK 250
+GGA RKEEVVTREYT+NLHKRLHGCTFKKKAPNAIKE+RKFAQKAMGTT VRIDVKLNK
Sbjct: 96 EGGAPRKEEVVTREYTVNLHKRLHGCTFKKKAPNAIKELRKFAQKAMGTTYVRIDVKLNK 275
Query: 251 HIWSSGIXXXXXXXXXXXXXXXNDEEDAKEELYSLVTVAEIPAEGLKGLGTKVVDETD*A 430
IWSSGI NDEEDAKEELYSLVTVAE+PAEGLKGLGTKVVD+T+*
Sbjct: 276 LIWSSGIRIVPRMVRVMIARRRNDEEDAKEELYSLVTVAEVPAEGLKGLGTKVVDDTE*T 455
Query: 431 VAFSTSLE 454
++ ST +E
Sbjct: 456 LSLSTLVE 479
Score = 126 bits (270), Expect = 1e-028
Identities = 58/91 (63%), Positives = 64/91 (70%)
Frame = +1 / +2
Query: 139 PRLHIQEEGTQRHQGDQEVCTEGHGHHGRQDRCEAQQAHLEQRDQERAAEGSCEDRPQEE 318
P L++QEEGTQ HQ EVCTEG+GH+ RQDR EAQQAHLEQ DQ RA GS +D PQEE
Sbjct: 164 PWLYLQEEGTQCHQRAPEVCTEGYGHNIRQDRREAQQAHLEQWDQNRAPYGSRDDCPQEE 343
Query: 319 R*GGCQGGTLLPCHRRGDPCRGLERAGDQGR 411
GG QGG LL HR C G E AG+Q R
Sbjct: 344 *RGGRQGGALLTRHRCRSAC*GFEGAGNQSR 436
Score = 126 bits (269), Expect(3) = 3e-036
Identities = 54/62 (87%), Positives = 55/62 (88%)
Frame = -1 / -1
Query: 258 QMCLLSFTSILTSVVPMAFCANFLISLMALGAFFLNVQPWRRLWRLMVYSLVTTSSFLDA 79
QM LLSFTSILT VVP+AFCANF SLMALGAFFL VQPWRRLWRL VYSLVTTSSFL A
Sbjct: 283 QMSLLSFTSILTYVVPIAFCANFRSSLMALGAFFLKVQPWRRLWRLTVYSLVTTSSFLGA 104
Query: 78 PP 73
PP
Sbjct: 103 PP 98
Score = 123 bits (263), Expect = 9e-028
Identities = 55/115 (47%), Positives = 68/115 (59%)
Frame = -3 / -3
Query: 448 RCGERDSLIGFVNDLGPQPFQALGRDLRDGDKGVEFLLGILLIVPLAGDPHTNPPRHXXX 269
+C R SL+ ++D G QP Q L R +GD+ VE LLG+LL++P AG+ H N H
Sbjct: 473 QCR*RKSLLSVIDDFGSQPLQTLSRHFGNGDE*VELLLGVLLVIPPAGNHHANHTGHDSD 294
Query: 268 XXXXDVLVELHIDPDVRGAHGLLCKLPDLLDGVGXXXXXXXXXXXXXXVDGVLPG 104
D LVELH+DPDV AH LLCKLP+L DG+G VDGVLPG
Sbjct: 293 PTAPDELVELHVDPDVCCAHSLLCKLPELFDGIGCLLLEGTAMEALVEVDGVLPG 129
Score = 34.5 bits (69), Expect(3) = 3e-036
Identities = 11/16 (68%), Positives = 12/16 (75%)
Frame = -2 / -2
Query: 335 WHPPHRSSCGRSSHEP 288
W PP SSCG+SS EP
Sbjct: 360 WRPPRHSSCGQSSREP 313
Score = 29.0 bits (57), Expect(3) = 3e-036
Identities = 12/14 (85%), Positives = 12/14 (85%)
Frame = -1 / -1
Query: 390 FKPSAGISATVTRE 349
FKPSAG SATVT E
Sbjct: 415 FKPSAGTSATVTSE 374
>gb|CV063157.1|CV063157 BNEL87c12 Barley EST endosperm library Hordeum vulgare subsp.
vulgare cDNA clone BNEL87c12 5' similar to putative 60S
ribosomal protein L31, mRNA sequence
Length = 626
Score = 155 bits (334), Expect(2) = 1e-058
Identities = 64/71 (90%), Positives = 67/71 (94%)
Frame = +2 / +1
Query: 59 MSQGKGGASRKEEVVTREYTINLHKRLHGCTFKKKAPNAIKEIRKFAQKAMGTTDVRIDV 238
M+ KGGA RKEEVVTREYT+NLHKRLHGCTFKKKAPNAIKE+RKFAQKAMGTTDVRIDV
Sbjct: 67 MADKKGGAPRKEEVVTREYTVNLHKRLHGCTFKKKAPNAIKELRKFAQKAMGTTDVRIDV 246
Query: 239 KLNKHIWSSGI 271
KLNK IWSSGI
Sbjct: 247 KLNKLIWSSGI 279
Score = 131 bits (281), Expect(2) = 1e-045
Identities = 56/63 (88%), Positives = 57/63 (90%)
Frame = -1 / -1
Query: 258 QMCLLSFTSILTSVVPMAFCANFLISLMALGAFFLNVQPWRRLWRLMVYSLVTTSSFLDA 79
QM LLSFTSILTSVVP+AFCANF SLMALGAFFL VQPWRRLWRL VYSLVTTSSFL A
Sbjct: 266 QMSLLSFTSILTSVVPIAFCANFRSSLMALGAFFLKVQPWRRLWRLTVYSLVTTSSFLGA 87
Query: 78 PPF 70
PPF
Sbjct: 86 PPF 78
Score = 90.9 bits (192), Expect(2) = 1e-058
Identities = 41/59 (69%), Positives = 49/59 (83%)
Frame = +2 / +2
Query: 320 DEEDAKEELYSLVTVAEIPAEGLKGLGTKVVDETD*AVAFSTSLESS*FVFATAKPFVS 496
DEEDAKEELYSLVTVAE+PAEGLKGLGTKVVD+T+* ++ ST LE + + T+ FVS
Sbjct: 329 DEEDAKEELYSLVTVAEVPAEGLKGLGTKVVDDTE*TLSLSTLLE*AAILHCTSMFFVS 505
Score = 89.5 bits (189), Expect(2) = 3e-026
Identities = 39/57 (68%), Positives = 44/57 (77%)
Frame = +1 / +3
Query: 139 PRLHIQEEGTQRHQGDQEVCTEGHGHHGRQDRCEAQQAHLEQRDQERAAEGSCEDRP 309
P L++QEEGTQ HQ EVCTEG+GH+ RQDR EAQQAHLEQ DQ+RA GS E P
Sbjct: 147 PWLYLQEEGTQCHQRAPEVCTEGYGHNRRQDRREAQQAHLEQWDQKRAP*GSREGLP 317
Score = 71.6 bits (150), Expect(2) = 1e-045
Identities = 32/74 (43%), Positives = 43/74 (58%)
Frame = -3 / -2
Query: 508 KNFLGYKRFCCCKYKLGTL*RCGERDSLIGFVNDLGPQPFQALGRDLRDGDKGVEFLLGI 329
K GYK+ + *+C R SL+ ++DLG QP Q L R L +GD+ VE LLG+
Sbjct: 517 KTSAGYKKHAGAMQNSSSF*QCR*RKSLLSVIDDLGSQPLQTLSRHLGNGDE*VELLLGV 338
Query: 328 LLIVPLAGDPHTNP 287
LL+ P AG+P P
Sbjct: 337 LLVNPPAGNPSREP 296
Score = 48.3 bits (99), Expect(2) = 3e-026
Identities = 27/70 (38%), Positives = 35/70 (50%)
Frame = +1 / +1
Query: 298 EDRPQEER*GGCQGGTLLPCHRRGDPCRGLERAGDQGR*RNRLSCRVLHIFREFLVCICN 477
+D PQE+ GG QGG LL HR C G E AG+QGR + + ++I R +
Sbjct: 307 KDCPQED*RGGRQGGALLTRHRCRGAC*GFEGAGNQGRR*H*VDSFFIYIARMSCYFALH 486
Query: 478 SKTFCIQGSF 507
FCI F
Sbjct: 487 QHVFCILRKF 516
>gb|AV917188.1|AV917188 AV917188 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags8i02 5', mRNA sequence
Length = 568
Score = 209 bits (451), Expect(2) = 2e-057
Identities = 92/128 (71%), Positives = 102/128 (79%)
Frame = +2 / +2
Query: 113 YTINLHKRLHGCTFKKKAPNAIKEIRKFAQKAMGTTDVRIDVKLNKHIWSSGIXXXXXXX 292
YT+NLHKRLHGCTFKKKAPNAIKE+RKFAQKAMGTTDVRIDVKLNK IWSSGI
Sbjct: 95 YTVNLHKRLHGCTFKKKAPNAIKELRKFAQKAMGTTDVRIDVKLNKLIWSSGIRSVPRRV 274
Query: 293 XXXXXXXXNDEEDAKEELYSLVTVAEIPAEGLKGLGTKVVDETD*AVAFSTSLESS*FVF 472
NDEEDAKEELYSLVTVAE+PAEGLKGLGTKVVD+T+* ++ ST LE + +
Sbjct: 275 RVRIARRRNDEEDAKEELYSLVTVAEVPAEGLKGLGTKVVDDTE*TLSLSTLLE*AVILH 454
Query: 473 ATAKPFVS 496
T+ FVS
Sbjct: 455 CTSMFFVS 478
Score = 139 bits (299), Expect(2) = 9e-036
Identities = 63/134 (47%), Positives = 78/134 (58%)
Frame = -3 / -1
Query: 508 KNFLGYKRFCCCKYKLGTL*RCGERDSLIGFVNDLGPQPFQALGRDLRDGDKGVEFLLGI 329
K GYK+ + *+C R SL+ ++DLG QP Q L R L +GD+ VE LLG+
Sbjct: 490 KTSAGYKKHAGAMQNNSSF*QCR*RKSLLSVIDDLGSQPLQTLSRHLGNGDE*VELLLGV 311
Query: 328 LLIVPLAGDPHTNPPRHXXXXXXXDVLVELHIDPDVRGAHGLLCKLPDLLDGVGXXXXXX 149
LL++P AG+PH NP H D LVELH+DPDV AH LLCKLP+L DG+G
Sbjct: 310 LLVIPPAGNPHANPTGHASDPTAPDELVELHVDPDVCCAHSLLCKLPELFDGIGCLLLEG 131
Query: 148 XXXXXXXXVDGVLP 107
VDGVLP
Sbjct: 130 TAMEALVEVDGVLP 89
Score = 134 bits (287), Expect = 4e-031
Identities = 66/123 (53%), Positives = 77/123 (62%)
Frame = +1 / +1
Query: 139 PRLHIQEEGTQRHQGDQEVCTEGHGHHGRQDRCEAQQAHLEQRDQERAAEGSCEDRPQEE 318
P L++QEEGTQ HQ EVCTEG+GH+ RQDR EAQQAHLEQ DQ+RA GS ED PQEE
Sbjct: 121 PWLYLQEEGTQCHQRAPEVCTEGYGHNRRQDRREAQQAHLEQWDQKRAP*GSREDCPQEE 300
Query: 319 R*GGCQGGTLLPCHRRGDPCRGLERAGDQGR*RNRLSCRVLHIFREFLVCICNSKTFCIQ 498
GG QGG LL HR C G E AG+QGR + + ++I R + FCI
Sbjct: 301 *RGGRQGGALLTRHRCRGAC*GFEGAGNQGRR*H*VDSFFIYIVRMSCYFALHQHVFCIL 480
Query: 499 GSF 507
F
Sbjct: 481 RKF 489
Score = 102 bits (218), Expect(3) = 2e-029
Identities = 43/49 (87%), Positives = 44/49 (89%)
Frame = -1 / -2
Query: 258 QMCLLSFTSILTSVVPMAFCANFLISLMALGAFFLNVQPWRRLWRLMVY 112
QM LLSFTSILTSVVP+AFCANF SLMALGAFFL VQPWRRLWRL VY
Sbjct: 240 QMSLLSFTSILTSVVPIAFCANFRSSLMALGAFFLKVQPWRRLWRLTVY 94
Score = 34.5 bits (69), Expect(3) = 2e-029
Identities = 11/16 (68%), Positives = 12/16 (75%)
Frame = -2 / -3
Query: 335 WHPPHRSSCGRSSHEP 288
W PP SSCG+SS EP
Sbjct: 317 WRPPRHSSCGQSSREP 270
Score = 32.7 bits (65), Expect(2) = 2e-057
Identities = 14/24 (58%), Positives = 16/24 (66%)
Frame = +2 / +1
Query: 38 RTRSRGDMSQGKGGASRKEEVVTR 109
R + M+ KGGA RKEEVVTR
Sbjct: 19 RXGXKXGMADKKGGAPRKEEVVTR 90
Score = 29.9 bits (59), Expect(2) = 9e-036
Identities = 12/13 (92%), Positives = 12/13 (92%)
Frame = -1 / -3
Query: 108 LVTTSSFLDAPPF 70
LVTTSSFL APPF
Sbjct: 89 LVTTSSFLGAPPF 51
Score = 29.0 bits (57), Expect(3) = 2e-029
Identities = 12/14 (85%), Positives = 12/14 (85%)
Frame = -1 / -2
Query: 390 FKPSAGISATVTRE 349
FKPSAG SATVT E
Sbjct: 372 FKPSAGTSATVTSE 331
>gb|BF629878.1|BF629878 HVSMEb0007D03f Hordeum vulgare seedling shoot EST library
HVcDNA0002 (Dehydration stress) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEb0007D03f, mRNA sequence
Length = 516
Score = 215 bits (465), Expect = 1e-055
Identities = 93/130 (71%), Positives = 102/130 (78%)
Frame = +2 / +2
Query: 86 RKEEVVTREYTINLHKRLHGCTFKKKAPNAIKEIRKFAQKAMGTTDVRIDVKLNKHIWSS 265
RK+EVVTREYT+NLHKRLHGCTFKKKAPNAIKEIRKFAQKAMGT DVRIDVKLNKHIWSS
Sbjct: 89 RKDEVVTREYTVNLHKRLHGCTFKKKAPNAIKEIRKFAQKAMGTNDVRIDVKLNKHIWSS 268
Query: 266 GIXXXXXXXXXXXXXXXNDEEDAKEELYSLVTVAEIPAEGLKGLGTKVVDETD*AVAFST 445
GI NDEEDAKEELYSLVTVAE+P EGLKGLGTKVV++ D* +
Sbjct: 269 GIRSVPRRVRVRIARKRNDEEDAKEELYSLVTVAEVPQEGLKGLGTKVVEDXD*TLCLLF 448
Query: 446 SLESS*FVFA 475
+*++ A
Sbjct: 449 QSVRT*YISA 478
Score = 107 bits (228), Expect(3) = 5e-028
Identities = 46/56 (82%), Positives = 47/56 (83%)
Frame = -1 / -1
Query: 258 QMCLLSFTSILTSVVPMAFCANFLISLMALGAFFLNVQPWRRLWRLMVYSLVTTSS 91
QMCLLS TS+ TS VPMAF ANFLISLMA GAFFL V PWRRLWRL VYS VTTSS
Sbjct: 261 QMCLLSLTSMRTSFVPMAFWANFLISLMAFGAFFLKVHPWRRLWRLTVYSRVTTSS 94
Score = 103 bits (220), Expect = 8e-022
Identities = 45/71 (63%), Positives = 52/71 (73%)
Frame = +1 / +1
Query: 139 PRLHIQEEGTQRHQGDQEVCTEGHGHHGRQDRCEAQQAHLEQRDQERAAEGSCEDRPQEE 318
PR+++QEEGT+ HQGDQEVC EGHG+ R AQQAHLEQR QE E C+D PQEE
Sbjct: 142 PRMYLQEEGTKCHQGDQEVCPEGHGNK*CPHRR*AQQAHLEQRHQECPEESPCQDCPQEE 321
Query: 319 R*GGCQGGTLL 351
R*GG GG +L
Sbjct: 322 R*GGR*GGAVL 354
Score = 102 bits (218), Expect = 1e-021
Identities = 51/130 (39%), Positives = 73/130 (56%)
Frame = -3 / -3
Query: 487 RFCCCKYKLGTL*RCGERDSLIGFVNDLGPQPFQALGRDLRDGDKGVEFLLGILLIVPLA 308
++ +Y L + * + + L+ +++LG Q F+ D + + V+ LL +LLIVPLA
Sbjct: 490 QYALSRYVLSSN*LKQQTEGLVXILHNLGTQTFKTFLGDFSNCHQRVQLLLSVLLIVPLA 311
Query: 307 GDPHTNPPRHXXXXXXXDVLVELHIDPDVRGAHGLLCKLPDLLDGVGXXXXXXXXXXXXX 128
G+P T+ PR DVLVEL++D D+ +HGLL KLPDLLDG+
Sbjct: 310 GNPDTDSPRDTPDAAAPDVLVELNVDADIICSHGLLGKLPDLLDGIWCLLLEGTSVEALV 131
Query: 127 XVDGVLPGDH 98
VDGVL G H
Sbjct: 130 EVDGVLAGHH 101
Score = 29.9 bits (59), Expect(3) = 5e-028
Identities = 10/12 (83%), Positives = 11/12 (91%)
Frame = -2 / -2
Query: 329 PPHRSSCGRSSH 294
PPHRSSCG+S H
Sbjct: 332 PPHRSSCGQS*H 297
Score = 24.4 bits (47), Expect(3) = 5e-028
Identities = 10/13 (76%), Positives = 11/13 (84%)
Frame = -1 / -1
Query: 387 KPSAGISATVTRE 349
+PS G SATVTRE
Sbjct: 390 RPSWGTSATVTRE 352
>gb|AL501922.1|AL501922 AL501922 Hordeum vulgare Barke roots Hordeum vulgare subsp. vulgare
cDNA clone HW05N13u 3', mRNA sequence
Length = 560
Score = 215 bits (464), Expect = 2e-055
Identities = 93/130 (71%), Positives = 102/130 (78%)
Frame = +2 / -2
Query: 86 RKEEVVTREYTINLHKRLHGCTFKKKAPNAIKEIRKFAQKAMGTTDVRIDVKLNKHIWSS 265
RK+EVVTREYT+NLHKRLHGCTFKKKAPNAIKEIRKFAQKAMGT DVRIDVKLNKHIWSS
Sbjct: 475 RKDEVVTREYTVNLHKRLHGCTFKKKAPNAIKEIRKFAQKAMGTNDVRIDVKLNKHIWSS 296
Query: 266 GIXXXXXXXXXXXXXXXNDEEDAKEELYSLVTVAEIPAEGLKGLGTKVVDETD*AVAFST 445
GI NDEEDAKEELYSLVTVAE+P EGLKGLGTKVV++ D* +
Sbjct: 295 GIRSVPRRVRVRIARKRNDEEDAKEELYSLVTVAEVPQEGLKGLGTKVVEDED*TLCLLF 116
Query: 446 SLESS*FVFA 475
+*++ A
Sbjct: 115 QSVRT*YISA 86
Score = 107 bits (228), Expect(3) = 6e-027
Identities = 46/56 (82%), Positives = 47/56 (83%)
Frame = -1 / +3
Query: 258 QMCLLSFTSILTSVVPMAFCANFLISLMALGAFFLNVQPWRRLWRLMVYSLVTTSS 91
QMCLLS TS+ TS VPMAF ANFLISLMA GAFFL V PWRRLWRL VYS VTTSS
Sbjct: 303 QMCLLSLTSMRTSFVPMAFWANFLISLMAFGAFFLKVHPWRRLWRLTVYSRVTTSS 470
Score = 101 bits (215), Expect = 4e-021
Identities = 44/71 (61%), Positives = 51/71 (71%)
Frame = +1 / -1
Query: 139 PRLHIQEEGTQRHQGDQEVCTEGHGHHGRQDRCEAQQAHLEQRDQERAAEGSCEDRPQEE 318
PR+++QEEGT+ HQGDQEVC EGHG+ R AQQAHLEQR QE E C+D PQEE
Sbjct: 422 PRMYLQEEGTKCHQGDQEVCPEGHGNK*CPHRR*AQQAHLEQRHQECPEESPCQDCPQEE 243
Query: 319 R*GGCQGGTLL 351
R GG GG +L
Sbjct: 242 RRGGR*GGAVL 210
Score = 100 bits (214), Expect = 5e-021
Identities = 50/130 (38%), Positives = 73/130 (56%)
Frame = -3 / +2
Query: 487 RFCCCKYKLGTL*RCGERDSLIGFVNDLGPQPFQALGRDLRDGDKGVEFLLGILLIVPLA 308
++ +Y L + * + + L+ +++LG Q F+ D + + V+ LL +LL+VPLA
Sbjct: 74 QYALSRYVLSSN*LKQQTEGLVLILHNLGTQTFKTFLGDFSNCHQRVQLLLSVLLVVPLA 253
Query: 307 GDPHTNPPRHXXXXXXXDVLVELHIDPDVRGAHGLLCKLPDLLDGVGXXXXXXXXXXXXX 128
G+P T+ PR DVLVEL++D D+ +HGLL KLPDLLDG+
Sbjct: 254 GNPDTDSPRDTPDAAAPDVLVELNVDADIICSHGLLGKLPDLLDGIWCLLLEGTSVEALV 433
Query: 127 XVDGVLPGDH 98
VDGVL G H
Sbjct: 434 EVDGVLAGHH 463
Score = 26.3 bits (51), Expect(3) = 6e-027
Identities = 9/12 (75%), Positives = 10/12 (83%)
Frame = -2 / +1
Query: 329 PPHRSSCGRSSH 294
PP RSSCG+S H
Sbjct: 232 PPRRSSCGQS*H 267
Score = 24.4 bits (47), Expect(3) = 6e-027
Identities = 10/13 (76%), Positives = 11/13 (84%)
Frame = -1 / +3
Query: 387 KPSAGISATVTRE 349
+PS G SATVTRE
Sbjct: 174 RPSWGTSATVTRE 212
>gb|AL504623.1|AL504623 AL504623 Hordeum vulgare Barke roots Hordeum vulgare subsp. vulgare
cDNA clone HW05N13V 5', mRNA sequence
Length = 571
Score = 215 bits (464), Expect = 2e-055
Identities = 93/130 (71%), Positives = 102/130 (78%)
Frame = +2 / +1
Query: 86 RKEEVVTREYTINLHKRLHGCTFKKKAPNAIKEIRKFAQKAMGTTDVRIDVKLNKHIWSS 265
RK+EVVTREYT+NLHKRLHGCTFKKKAPNAIKEIRKFAQKAMGT DVRIDVKLNKHIWSS
Sbjct: 97 RKDEVVTREYTVNLHKRLHGCTFKKKAPNAIKEIRKFAQKAMGTNDVRIDVKLNKHIWSS 276
Query: 266 GIXXXXXXXXXXXXXXXNDEEDAKEELYSLVTVAEIPAEGLKGLGTKVVDETD*AVAFST 445
GI NDEEDAKEELYSLVTVAE+P EGLKGLGTKVV++ D* +
Sbjct: 277 GIRSVPRRVRVRIARKRNDEEDAKEELYSLVTVAEVPQEGLKGLGTKVVEDED*TLCLLF 456
Query: 446 SLESS*FVFA 475
+*++ A
Sbjct: 457 QSVRT*YISA 486
Score = 107 bits (228), Expect(3) = 6e-027
Identities = 46/56 (82%), Positives = 47/56 (83%)
Frame = -1 / -3
Query: 258 QMCLLSFTSILTSVVPMAFCANFLISLMALGAFFLNVQPWRRLWRLMVYSLVTTSS 91
QMCLLS TS+ TS VPMAF ANFLISLMA GAFFL V PWRRLWRL VYS VTTSS
Sbjct: 269 QMCLLSLTSMRTSFVPMAFWANFLISLMAFGAFFLKVHPWRRLWRLTVYSRVTTSS 102
Score = 101 bits (215), Expect = 4e-021
Identities = 44/71 (61%), Positives = 51/71 (71%)
Frame = +1 / +3
Query: 139 PRLHIQEEGTQRHQGDQEVCTEGHGHHGRQDRCEAQQAHLEQRDQERAAEGSCEDRPQEE 318
PR+++QEEGT+ HQGDQEVC EGHG+ R AQQAHLEQR QE E C+D PQEE
Sbjct: 150 PRMYLQEEGTKCHQGDQEVCPEGHGNK*CPHRR*AQQAHLEQRHQECPEESPCQDCPQEE 329
Query: 319 R*GGCQGGTLL 351
R GG GG +L
Sbjct: 330 RRGGR*GGAVL 362
Score = 100 bits (214), Expect = 5e-021
Identities = 50/130 (38%), Positives = 73/130 (56%)
Frame = -3 / -2
Query: 487 RFCCCKYKLGTL*RCGERDSLIGFVNDLGPQPFQALGRDLRDGDKGVEFLLGILLIVPLA 308
++ +Y L + * + + L+ +++LG Q F+ D + + V+ LL +LL+VPLA
Sbjct: 498 QYALSRYVLSSN*LKQQTEGLVLILHNLGTQTFKTFLGDFSNCHQRVQLLLSVLLVVPLA 319
Query: 307 GDPHTNPPRHXXXXXXXDVLVELHIDPDVRGAHGLLCKLPDLLDGVGXXXXXXXXXXXXX 128
G+P T+ PR DVLVEL++D D+ +HGLL KLPDLLDG+
Sbjct: 318 GNPDTDSPRDTPDAAAPDVLVELNVDADIICSHGLLGKLPDLLDGIWCLLLEGTSVEALV 139
Query: 127 XVDGVLPGDH 98
VDGVL G H
Sbjct: 138 EVDGVLAGHH 109
Score = 26.3 bits (51), Expect(3) = 6e-027
Identities = 9/12 (75%), Positives = 10/12 (83%)
Frame = -2 / -1
Query: 329 PPHRSSCGRSSH 294
PP RSSCG+S H
Sbjct: 340 PPRRSSCGQS*H 305
Score = 24.4 bits (47), Expect(3) = 6e-027
Identities = 10/13 (76%), Positives = 11/13 (84%)
Frame = -1 / -3
Query: 387 KPSAGISATVTRE 349
+PS G SATVTRE
Sbjct: 398 RPSWGTSATVTRE 360
>gb|AL504947.1|AL504947 AL504947 Hordeum vulgare Barke roots Hordeum vulgare subsp. vulgare
cDNA clone HW06O13V 5', mRNA sequence
Length = 700
Score = 215 bits (464), Expect = 2e-055
Identities = 93/130 (71%), Positives = 102/130 (78%)
Frame = +2 / -3
Query: 86 RKEEVVTREYTINLHKRLHGCTFKKKAPNAIKEIRKFAQKAMGTTDVRIDVKLNKHIWSS 265
RK+EVVTREYT+NLHKRLHGCTFKKKAPNAIKEIRKFAQKAMGT DVRIDVKLNKHIWSS
Sbjct: 518 RKDEVVTREYTVNLHKRLHGCTFKKKAPNAIKEIRKFAQKAMGTNDVRIDVKLNKHIWSS 339
Query: 266 GIXXXXXXXXXXXXXXXNDEEDAKEELYSLVTVAEIPAEGLKGLGTKVVDETD*AVAFST 445
GI NDEEDAKEELYSLVTVAE+P EGLKGLGTKVV++ D* +
Sbjct: 338 GIRSVPRRVRVRIARKRNDEEDAKEELYSLVTVAEVPQEGLKGLGTKVVEDED*TLCLLF 159
Query: 446 SLESS*FVFA 475
+*++ A
Sbjct: 158 QSVRT*YISA 129
Score = 107 bits (228), Expect(3) = 6e-027
Identities = 46/56 (82%), Positives = 47/56 (83%)
Frame = -1 / +1
Query: 258 QMCLLSFTSILTSVVPMAFCANFLISLMALGAFFLNVQPWRRLWRLMVYSLVTTSS 91
QMCLLS TS+ TS VPMAF ANFLISLMA GAFFL V PWRRLWRL VYS VTTSS
Sbjct: 346 QMCLLSLTSMRTSFVPMAFWANFLISLMAFGAFFLKVHPWRRLWRLTVYSRVTTSS 513
Score = 101 bits (215), Expect = 4e-021
Identities = 51/130 (39%), Positives = 74/130 (56%)
Frame = -3 / +3
Query: 487 RFCCCKYKLGTL*RCGERDSLIGFVNDLGPQPFQALGRDLRDGDKGVEFLLGILLIVPLA 308
++ +Y L + * + + L+ +++LG Q F+ D + + V+ LL +LL+VPLA
Sbjct: 117 QYALSRYVLSSN*LKQQTEGLVLILHNLGTQTFKTFLGDFSNCHQRVQLLLSVLLVVPLA 296
Query: 307 GDPHTNPPRHXXXXXXXDVLVELHIDPDVRGAHGLLCKLPDLLDGVGXXXXXXXXXXXXX 128
G+P T+ PR DVLVEL++D D+ +HGLL KLPDLLDG+
Sbjct: 297 GNPDTDSPRDTPDAAAPDVLVELNVDADIICSHGLLGKLPDLLDGIWXLLLEGTSVEALV 476
Query: 127 XVDGVLPGDH 98
VDGVL G H
Sbjct: 477 EVDGVLAGHH 506
Score = 26.3 bits (51), Expect(3) = 6e-027
Identities = 9/12 (75%), Positives = 10/12 (83%)
Frame = -2 / +2
Query: 329 PPHRSSCGRSSH 294
PP RSSCG+S H
Sbjct: 275 PPRRSSCGQS*H 310
Score = 24.4 bits (47), Expect(3) = 6e-027
Identities = 10/13 (76%), Positives = 11/13 (84%)
Frame = -1 / +1
Query: 387 KPSAGISATVTRE 349
+PS G SATVTRE
Sbjct: 217 RPSWGTSATVTRE 255
>gb|AL505546.1|AL505546 AL505546 Hordeum vulgare Barke roots Hordeum vulgare subsp. vulgare
cDNA clone HW08M24V 5', mRNA sequence
Length = 644
Score = 215 bits (464), Expect = 2e-055
Identities = 93/130 (71%), Positives = 102/130 (78%)
Frame = +2 / +2
Query: 86 RKEEVVTREYTINLHKRLHGCTFKKKAPNAIKEIRKFAQKAMGTTDVRIDVKLNKHIWSS 265
RK+EVVTREYT+NLHKRLHGCTFKKKAPNAIKEIRKFAQKAMGT DVRIDVKLNKHIWSS
Sbjct: 92 RKDEVVTREYTVNLHKRLHGCTFKKKAPNAIKEIRKFAQKAMGTNDVRIDVKLNKHIWSS 271
Query: 266 GIXXXXXXXXXXXXXXXNDEEDAKEELYSLVTVAEIPAEGLKGLGTKVVDETD*AVAFST 445
GI NDEEDAKEELYSLVTVAE+P EGLKGLGTKVV++ D* +
Sbjct: 272 GIRSVPRRVRVRIARKRNDEEDAKEELYSLVTVAEVPQEGLKGLGTKVVEDED*TLCLLF 451
Query: 446 SLESS*FVFA 475
+*++ A
Sbjct: 452 QSVRT*YISA 481
Score = 107 bits (228), Expect(3) = 6e-027
Identities = 46/56 (82%), Positives = 47/56 (83%)
Frame = -1 / -3
Query: 258 QMCLLSFTSILTSVVPMAFCANFLISLMALGAFFLNVQPWRRLWRLMVYSLVTTSS 91
QMCLLS TS+ TS VPMAF ANFLISLMA GAFFL V PWRRLWRL VYS VTTSS
Sbjct: 264 QMCLLSLTSMRTSFVPMAFWANFLISLMAFGAFFLKVHPWRRLWRLTVYSRVTTSS 97
Score = 101 bits (215), Expect = 4e-021
Identities = 44/71 (61%), Positives = 51/71 (71%)
Frame = +1 / +1
Query: 139 PRLHIQEEGTQRHQGDQEVCTEGHGHHGRQDRCEAQQAHLEQRDQERAAEGSCEDRPQEE 318
PR+++QEEGT+ HQGDQEVC EGHG+ R AQQAHLEQR QE E C+D PQEE
Sbjct: 145 PRMYLQEEGTKCHQGDQEVCPEGHGNK*CPHRR*AQQAHLEQRHQECPEESPCQDCPQEE 324
Query: 319 R*GGCQGGTLL 351
R GG GG +L
Sbjct: 325 RRGGR*GGAVL 357
Score = 100 bits (214), Expect = 5e-021
Identities = 50/130 (38%), Positives = 73/130 (56%)
Frame = -3 / -2
Query: 487 RFCCCKYKLGTL*RCGERDSLIGFVNDLGPQPFQALGRDLRDGDKGVEFLLGILLIVPLA 308
++ +Y L + * + + L+ +++LG Q F+ D + + V+ LL +LL+VPLA
Sbjct: 493 QYALSRYVLSSN*LKQQTEGLVLILHNLGTQTFKTFLGDFSNCHQRVQLLLSVLLVVPLA 314
Query: 307 GDPHTNPPRHXXXXXXXDVLVELHIDPDVRGAHGLLCKLPDLLDGVGXXXXXXXXXXXXX 128
G+P T+ PR DVLVEL++D D+ +HGLL KLPDLLDG+
Sbjct: 313 GNPDTDSPRDTPDAAAPDVLVELNVDADIICSHGLLGKLPDLLDGIWCLLLEGTSVEALV 134
Query: 127 XVDGVLPGDH 98
VDGVL G H
Sbjct: 133 EVDGVLAGHH 104
Score = 26.3 bits (51), Expect(3) = 6e-027
Identities = 9/12 (75%), Positives = 10/12 (83%)
Frame = -2 / -1
Query: 329 PPHRSSCGRSSH 294
PP RSSCG+S H
Sbjct: 335 PPRRSSCGQS*H 300
Score = 24.4 bits (47), Expect(3) = 6e-027
Identities = 10/13 (76%), Positives = 11/13 (84%)
Frame = -1 / -3
Query: 387 KPSAGISATVTRE 349
+PS G SATVTRE
Sbjct: 393 RPSWGTSATVTRE 355
>gb|AL507504.1|AL507504 AL507504 Hordeum vulgare Barke developing caryopsis (3.-15.DAP)
Hordeum vulgare subsp. vulgare cDNA clone HY06A08V 5',
mRNA sequence
Length = 586
Score = 215 bits (464), Expect = 2e-055
Identities = 93/130 (71%), Positives = 102/130 (78%)
Frame = +2 / +1
Query: 86 RKEEVVTREYTINLHKRLHGCTFKKKAPNAIKEIRKFAQKAMGTTDVRIDVKLNKHIWSS 265
RK+EVVTREYT+NLHKRLHGCTFKKKAPNAIKEIRKFAQKAMGT DVRIDVKLNKHIWSS
Sbjct: 82 RKDEVVTREYTVNLHKRLHGCTFKKKAPNAIKEIRKFAQKAMGTNDVRIDVKLNKHIWSS 261
Query: 266 GIXXXXXXXXXXXXXXXNDEEDAKEELYSLVTVAEIPAEGLKGLGTKVVDETD*AVAFST 445
GI NDEEDAKEELYSLVTVAE+P EGLKGLGTKVV++ D* +
Sbjct: 262 GIRSVPRRVRVRIARKRNDEEDAKEELYSLVTVAEVPQEGLKGLGTKVVEDED*TLCLLF 441
Query: 446 SLESS*FVFA 475
+*++ A
Sbjct: 442 QSVRT*YISA 471
Score = 107 bits (228), Expect(3) = 6e-027
Identities = 46/56 (82%), Positives = 47/56 (83%)
Frame = -1 / -3
Query: 258 QMCLLSFTSILTSVVPMAFCANFLISLMALGAFFLNVQPWRRLWRLMVYSLVTTSS 91
QMCLLS TS+ TS VPMAF ANFLISLMA GAFFL V PWRRLWRL VYS VTTSS
Sbjct: 254 QMCLLSLTSMRTSFVPMAFWANFLISLMAFGAFFLKVHPWRRLWRLTVYSRVTTSS 87
Score = 101 bits (215), Expect = 4e-021
Identities = 44/71 (61%), Positives = 51/71 (71%)
Frame = +1 / +3
Query: 139 PRLHIQEEGTQRHQGDQEVCTEGHGHHGRQDRCEAQQAHLEQRDQERAAEGSCEDRPQEE 318
PR+++QEEGT+ HQGDQEVC EGHG+ R AQQAHLEQR QE E C+D PQEE
Sbjct: 135 PRMYLQEEGTKCHQGDQEVCPEGHGNK*CPHRR*AQQAHLEQRHQECPEESPCQDCPQEE 314
Query: 319 R*GGCQGGTLL 351
R GG GG +L
Sbjct: 315 RRGGR*GGAVL 347
Score = 100 bits (214), Expect = 5e-021
Identities = 50/130 (38%), Positives = 73/130 (56%)
Frame = -3 / -2
Query: 487 RFCCCKYKLGTL*RCGERDSLIGFVNDLGPQPFQALGRDLRDGDKGVEFLLGILLIVPLA 308
++ +Y L + * + + L+ +++LG Q F+ D + + V+ LL +LL+VPLA
Sbjct: 483 QYALSRYVLSSN*LKQQTEGLVLILHNLGTQTFKTFLGDFSNCHQRVQLLLSVLLVVPLA 304
Query: 307 GDPHTNPPRHXXXXXXXDVLVELHIDPDVRGAHGLLCKLPDLLDGVGXXXXXXXXXXXXX 128
G+P T+ PR DVLVEL++D D+ +HGLL KLPDLLDG+
Sbjct: 303 GNPDTDSPRDTPDAAAPDVLVELNVDADIICSHGLLGKLPDLLDGIWCLLLEGTSVEALV 124
Query: 127 XVDGVLPGDH 98
VDGVL G H
Sbjct: 123 EVDGVLAGHH 94
Score = 26.3 bits (51), Expect(3) = 6e-027
Identities = 9/12 (75%), Positives = 10/12 (83%)
Frame = -2 / -1
Query: 329 PPHRSSCGRSSH 294
PP RSSCG+S H
Sbjct: 325 PPRRSSCGQS*H 290
Score = 24.4 bits (47), Expect(3) = 6e-027
Identities = 10/13 (76%), Positives = 11/13 (84%)
Frame = -1 / -3
Query: 387 KPSAGISATVTRE 349
+PS G SATVTRE
Sbjct: 383 RPSWGTSATVTRE 345
>gb|BG368539.1|BG368539 HVSMEi0019J01f Hordeum vulgare 20 DAP spike EST library HVcDNA0010
(20 DAP) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEi0019J01f, mRNA sequence
Length = 613
Score = 215 bits (464), Expect = 2e-055
Identities = 93/130 (71%), Positives = 102/130 (78%)
Frame = +2 / +3
Query: 86 RKEEVVTREYTINLHKRLHGCTFKKKAPNAIKEIRKFAQKAMGTTDVRIDVKLNKHIWSS 265
RK+EVVTREYT+NLHKRLHGCTFKKKAPNAIKEIRKFAQKAMGT DVRIDVKLNKHIWSS
Sbjct: 90 RKDEVVTREYTVNLHKRLHGCTFKKKAPNAIKEIRKFAQKAMGTNDVRIDVKLNKHIWSS 269
Query: 266 GIXXXXXXXXXXXXXXXNDEEDAKEELYSLVTVAEIPAEGLKGLGTKVVDETD*AVAFST 445
GI NDEEDAKEELYSLVTVAE+P EGLKGLGTKVV++ D* +
Sbjct: 270 GIRSVPRRVRVRIARKRNDEEDAKEELYSLVTVAEVPQEGLKGLGTKVVEDED*TLCLLF 449
Query: 446 SLESS*FVFA 475
+*++ A
Sbjct: 450 QSVRT*YISA 479
Score = 107 bits (228), Expect(3) = 5e-028
Identities = 46/56 (82%), Positives = 47/56 (83%)
Frame = -1 / -1
Query: 258 QMCLLSFTSILTSVVPMAFCANFLISLMALGAFFLNVQPWRRLWRLMVYSLVTTSS 91
QMCLLS TS+ TS VPMAF ANFLISLMA GAFFL V PWRRLWRL VYS VTTSS
Sbjct: 262 QMCLLSLTSMRTSFVPMAFWANFLISLMAFGAFFLKVHPWRRLWRLTVYSRVTTSS 95
Score = 103 bits (220), Expect = 8e-022
Identities = 45/71 (63%), Positives = 52/71 (73%)
Frame = +1 / +2
Query: 139 PRLHIQEEGTQRHQGDQEVCTEGHGHHGRQDRCEAQQAHLEQRDQERAAEGSCEDRPQEE 318
PR+++QEEGT+ HQGDQEVC EGHG+ R AQQAHLEQR QE E C+D PQEE
Sbjct: 143 PRMYLQEEGTKCHQGDQEVCPEGHGNK*CPHRR*AQQAHLEQRHQECPEESPCQDCPQEE 322
Query: 319 R*GGCQGGTLL 351
R*GG GG +L
Sbjct: 323 R*GGR*GGAVL 355
Score = 101 bits (215), Expect = 4e-021
Identities = 51/130 (39%), Positives = 73/130 (56%)
Frame = -3 / -3
Query: 487 RFCCCKYKLGTL*RCGERDSLIGFVNDLGPQPFQALGRDLRDGDKGVEFLLGILLIVPLA 308
++ +Y L + * + + L+ +++LG Q F+ D + + V+ LL +LLIVPLA
Sbjct: 491 QYALSRYVLSSN*LKQQTEGLVLILHNLGTQTFKTFLGDFSNCHQRVQLLLSVLLIVPLA 312
Query: 307 GDPHTNPPRHXXXXXXXDVLVELHIDPDVRGAHGLLCKLPDLLDGVGXXXXXXXXXXXXX 128
G+P T+ PR DVLVEL++D D+ +HGLL KLPDLLDG+
Sbjct: 311 GNPDTDSPRDTPDAAAPDVLVELNVDADIICSHGLLGKLPDLLDGIWCLLLEGTSVEALV 132
Query: 127 XVDGVLPGDH 98
VDGVL G H
Sbjct: 131 EVDGVLAGHH 102
Score = 29.9 bits (59), Expect(3) = 5e-028
Identities = 10/12 (83%), Positives = 11/12 (91%)
Frame = -2 / -2
Query: 329 PPHRSSCGRSSH 294
PPHRSSCG+S H
Sbjct: 333 PPHRSSCGQS*H 298
Score = 24.4 bits (47), Expect(3) = 5e-028
Identities = 10/13 (76%), Positives = 11/13 (84%)
Frame = -1 / -1
Query: 387 KPSAGISATVTRE 349
+PS G SATVTRE
Sbjct: 391 RPSWGTSATVTRE 353
>gb|BE215694.1|BE215694 HV_CEb0008D21f Hordeum vulgare seedling green leaf EST library
HVcDNA0005 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEb0008D21f, mRNA sequence
Length = 521
Score = 215 bits (464), Expect = 2e-055
Identities = 93/130 (71%), Positives = 102/130 (78%)
Frame = +2 / +1
Query: 86 RKEEVVTREYTINLHKRLHGCTFKKKAPNAIKEIRKFAQKAMGTTDVRIDVKLNKHIWSS 265
RK+EVVTREYT+NLHKRLHGCTFKKKAPNAIKEIRKFAQKAMGT DVRIDVKLNKHIWSS
Sbjct: 88 RKDEVVTREYTVNLHKRLHGCTFKKKAPNAIKEIRKFAQKAMGTNDVRIDVKLNKHIWSS 267
Query: 266 GIXXXXXXXXXXXXXXXNDEEDAKEELYSLVTVAEIPAEGLKGLGTKVVDETD*AVAFST 445
GI NDEEDAKEELYSLVTVAE+P EGLKGLGTKVV++ D* +
Sbjct: 268 GIRSVPRRVRVRIARKRNDEEDAKEELYSLVTVAEVPQEGLKGLGTKVVEDED*TLCLLF 447
Query: 446 SLESS*FVFA 475
+*++ A
Sbjct: 448 QSVRT*YISA 477
Score = 107 bits (228), Expect(3) = 6e-027
Identities = 46/56 (82%), Positives = 47/56 (83%)
Frame = -1 / -1
Query: 258 QMCLLSFTSILTSVVPMAFCANFLISLMALGAFFLNVQPWRRLWRLMVYSLVTTSS 91
QMCLLS TS+ TS VPMAF ANFLISLMA GAFFL V PWRRLWRL VYS VTTSS
Sbjct: 260 QMCLLSLTSMRTSFVPMAFWANFLISLMAFGAFFLKVHPWRRLWRLTVYSRVTTSS 93
Score = 101 bits (215), Expect = 4e-021
Identities = 44/71 (61%), Positives = 51/71 (71%)
Frame = +1 / +3
Query: 139 PRLHIQEEGTQRHQGDQEVCTEGHGHHGRQDRCEAQQAHLEQRDQERAAEGSCEDRPQEE 318
PR+++QEEGT+ HQGDQEVC EGHG+ R AQQAHLEQR QE E C+D PQEE
Sbjct: 141 PRMYLQEEGTKCHQGDQEVCPEGHGNK*CPHRR*AQQAHLEQRHQECPEESPCQDCPQEE 320
Query: 319 R*GGCQGGTLL 351
R GG GG +L
Sbjct: 321 RRGGR*GGAVL 353
Score = 100 bits (214), Expect = 5e-021
Identities = 50/130 (38%), Positives = 73/130 (56%)
Frame = -3 / -3
Query: 487 RFCCCKYKLGTL*RCGERDSLIGFVNDLGPQPFQALGRDLRDGDKGVEFLLGILLIVPLA 308
++ +Y L + * + + L+ +++LG Q F+ D + + V+ LL +LL+VPLA
Sbjct: 489 QYALSRYVLSSN*LKQQTEGLVLILHNLGTQTFKTFLGDFSNCHQRVQLLLSVLLVVPLA 310
Query: 307 GDPHTNPPRHXXXXXXXDVLVELHIDPDVRGAHGLLCKLPDLLDGVGXXXXXXXXXXXXX 128
G+P T+ PR DVLVEL++D D+ +HGLL KLPDLLDG+
Sbjct: 309 GNPDTDSPRDTPDAAAPDVLVELNVDADIICSHGLLGKLPDLLDGIWCLLLEGTSVEALV 130
Query: 127 XVDGVLPGDH 98
VDGVL G H
Sbjct: 129 EVDGVLAGHH 100
Score = 26.3 bits (51), Expect(3) = 6e-027
Identities = 9/12 (75%), Positives = 10/12 (83%)
Frame = -2 / -2
Query: 329 PPHRSSCGRSSH 294
PP RSSCG+S H
Sbjct: 331 PPRRSSCGQS*H 296
Score = 24.4 bits (47), Expect(3) = 6e-027
Identities = 10/13 (76%), Positives = 11/13 (84%)
Frame = -1 / -1
Query: 387 KPSAGISATVTRE 349
+PS G SATVTRE
Sbjct: 389 RPSWGTSATVTRE 351
>gb|BE230981.2|BE230981 HVSMEg0015F14f Hordeum vulgare pre-anthesis spike EST library
HVcDNA0008 (white to yellow anther) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEg0015F14f, mRNA sequence
Length = 586
Score = 215 bits (464), Expect = 2e-055
Identities = 93/130 (71%), Positives = 102/130 (78%)
Frame = +2 / +3
Query: 86 RKEEVVTREYTINLHKRLHGCTFKKKAPNAIKEIRKFAQKAMGTTDVRIDVKLNKHIWSS 265
RK+EVVTREYT+NLHKRLHGCTFKKKAPNAIKEIRKFAQKAMGT DVRIDVKLNKHIWSS
Sbjct: 78 RKDEVVTREYTVNLHKRLHGCTFKKKAPNAIKEIRKFAQKAMGTNDVRIDVKLNKHIWSS 257
Query: 266 GIXXXXXXXXXXXXXXXNDEEDAKEELYSLVTVAEIPAEGLKGLGTKVVDETD*AVAFST 445
GI NDEEDAKEELYSLVTVAE+P EGLKGLGTKVV++ D* +
Sbjct: 258 GIRSVPRRVRVRIARKRNDEEDAKEELYSLVTVAEVPQEGLKGLGTKVVEDED*TLCLLF 437
Query: 446 SLESS*FVFA 475
+*++ A
Sbjct: 438 QSVRT*YISA 467
Score = 107 bits (228), Expect(3) = 5e-028
Identities = 46/56 (82%), Positives = 47/56 (83%)
Frame = -1 / -1
Query: 258 QMCLLSFTSILTSVVPMAFCANFLISLMALGAFFLNVQPWRRLWRLMVYSLVTTSS 91
QMCLLS TS+ TS VPMAF ANFLISLMA GAFFL V PWRRLWRL VYS VTTSS
Sbjct: 250 QMCLLSLTSMRTSFVPMAFWANFLISLMAFGAFFLKVHPWRRLWRLTVYSRVTTSS 83
Score = 103 bits (220), Expect = 8e-022
Identities = 45/71 (63%), Positives = 52/71 (73%)
Frame = +1 / +2
Query: 139 PRLHIQEEGTQRHQGDQEVCTEGHGHHGRQDRCEAQQAHLEQRDQERAAEGSCEDRPQEE 318
PR+++QEEGT+ HQGDQEVC EGHG+ R AQQAHLEQR QE E C+D PQEE
Sbjct: 131 PRMYLQEEGTKCHQGDQEVCPEGHGNK*CPHRR*AQQAHLEQRHQECPEESPCQDCPQEE 310
Query: 319 R*GGCQGGTLL 351
R*GG GG +L
Sbjct: 311 R*GGR*GGAVL 343
Score = 101 bits (215), Expect = 4e-021
Identities = 51/130 (39%), Positives = 73/130 (56%)
Frame = -3 / -3
Query: 487 RFCCCKYKLGTL*RCGERDSLIGFVNDLGPQPFQALGRDLRDGDKGVEFLLGILLIVPLA 308
++ +Y L + * + + L+ +++LG Q F+ D + + V+ LL +LLIVPLA
Sbjct: 479 QYALSRYVLSSN*LKQQTEGLVLILHNLGTQTFKTFLGDFSNCHQRVQLLLSVLLIVPLA 300
Query: 307 GDPHTNPPRHXXXXXXXDVLVELHIDPDVRGAHGLLCKLPDLLDGVGXXXXXXXXXXXXX 128
G+P T+ PR DVLVEL++D D+ +HGLL KLPDLLDG+
Sbjct: 299 GNPDTDSPRDTPDAAAPDVLVELNVDADIICSHGLLGKLPDLLDGIWCLLLEGTSVEALV 120
Query: 127 XVDGVLPGDH 98
VDGVL G H
Sbjct: 119 EVDGVLAGHH 90
Score = 29.9 bits (59), Expect(3) = 5e-028
Identities = 10/12 (83%), Positives = 11/12 (91%)
Frame = -2 / -2
Query: 329 PPHRSSCGRSSH 294
PPHRSSCG+S H
Sbjct: 321 PPHRSSCGQS*H 286
Score = 24.4 bits (47), Expect(3) = 5e-028
Identities = 10/13 (76%), Positives = 11/13 (84%)
Frame = -1 / -1
Query: 387 KPSAGISATVTRE 349
+PS G SATVTRE
Sbjct: 379 RPSWGTSATVTRE 341
>gb|BF627231.3|BF627231 HVSMEb0004E20f Hordeum vulgare seedling shoot EST library
HVcDNA0002 (Dehydration stress) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEb0004E20f, mRNA sequence
Length = 619
Score = 215 bits (464), Expect = 2e-055
Identities = 93/130 (71%), Positives = 102/130 (78%)
Frame = +2 / +1
Query: 86 RKEEVVTREYTINLHKRLHGCTFKKKAPNAIKEIRKFAQKAMGTTDVRIDVKLNKHIWSS 265
RK+EVVTREYT+NLHKRLHGCTFKKKAPNAIKEIRKFAQKAMGT DVRIDVKLNKHIWSS
Sbjct: 91 RKDEVVTREYTVNLHKRLHGCTFKKKAPNAIKEIRKFAQKAMGTNDVRIDVKLNKHIWSS 270
Query: 266 GIXXXXXXXXXXXXXXXNDEEDAKEELYSLVTVAEIPAEGLKGLGTKVVDETD*AVAFST 445
GI NDEEDAKEELYSLVTVAE+P EGLKGLGTKVV++ D* +
Sbjct: 271 GIRSVPRRVRVRIARKRNDEEDAKEELYSLVTVAEVPQEGLKGLGTKVVEDED*TLCLLF 450
Query: 446 SLESS*FVFA 475
+*++ A
Sbjct: 451 QSVRT*YISA 480
Score = 101 bits (215), Expect(3) = 3e-026
Identities = 45/56 (80%), Positives = 46/56 (82%)
Frame = -1 / -3
Query: 258 QMCLLSFTSILTSVVPMAFCANFLISLMALGAFFLNVQPWRRLWRLMVYSLVTTSS 91
QMCLLS TS+ TS VPMAF ANFLISLMA GAFFL V P RRLWRL VYS VTTSS
Sbjct: 263 QMCLLSLTSMRTSFVPMAFWANFLISLMAFGAFFLKVHPCRRLWRLTVYSRVTTSS 96
Score = 100 bits (213), Expect = 7e-021
Identities = 44/70 (62%), Positives = 51/70 (72%)
Frame = +1 / +3
Query: 142 RLHIQEEGTQRHQGDQEVCTEGHGHHGRQDRCEAQQAHLEQRDQERAAEGSCEDRPQEER 321
R+++QEEGT+ HQGDQEVC EGHG+ R AQQAHLEQR QE E C+D PQEER
Sbjct: 147 RMYLQEEGTKCHQGDQEVCPEGHGNK*CPHRR*AQQAHLEQRHQECPEESPCQDCPQEER 326
Query: 322 *GGCQGGTLL 351
*GG GG +L
Sbjct: 327 *GGR*GGAVL 356
Score = 29.9 bits (59), Expect(3) = 3e-026
Identities = 10/12 (83%), Positives = 11/12 (91%)
Frame = -2 / -1
Query: 329 PPHRSSCGRSSH 294
PPHRSSCG+S H
Sbjct: 334 PPHRSSCGQS*H 299
Score = 24.4 bits (47), Expect(3) = 3e-026
Identities = 10/13 (76%), Positives = 11/13 (84%)
Frame = -1 / -3
Query: 387 KPSAGISATVTRE 349
+PS G SATVTRE
Sbjct: 392 RPSWGTSATVTRE 354
>gb|BG300119.2|BG300119 HVSMEb0010C12f Hordeum vulgare seedling shoot EST library
HVcDNA0002 (Dehydration stress) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEb0010C12f, mRNA sequence
Length = 516
Score = 215 bits (464), Expect = 2e-055
Identities = 93/130 (71%), Positives = 102/130 (78%)
Frame = +2 / +3
Query: 86 RKEEVVTREYTINLHKRLHGCTFKKKAPNAIKEIRKFAQKAMGTTDVRIDVKLNKHIWSS 265
RK+EVVTREYT+NLHKRLHGCTFKKKAPNAIKEIRKFAQKAMGT DVRIDVKLNKHIWSS
Sbjct: 81 RKDEVVTREYTVNLHKRLHGCTFKKKAPNAIKEIRKFAQKAMGTNDVRIDVKLNKHIWSS 260
Query: 266 GIXXXXXXXXXXXXXXXNDEEDAKEELYSLVTVAEIPAEGLKGLGTKVVDETD*AVAFST 445
GI NDEEDAKEELYSLVTVAE+P EGLKGLGTKVV++ D* +
Sbjct: 261 GIRSVPRRVRVRIARKRNDEEDAKEELYSLVTVAEVPQEGLKGLGTKVVEDED*TLCLLF 440
Query: 446 SLESS*FVFA 475
+*++ A
Sbjct: 441 QSVRT*YISA 470
Score = 107 bits (228), Expect(3) = 5e-028
Identities = 46/56 (82%), Positives = 47/56 (83%)
Frame = -1 / -3
Query: 258 QMCLLSFTSILTSVVPMAFCANFLISLMALGAFFLNVQPWRRLWRLMVYSLVTTSS 91
QMCLLS TS+ TS VPMAF ANFLISLMA GAFFL V PWRRLWRL VYS VTTSS
Sbjct: 253 QMCLLSLTSMRTSFVPMAFWANFLISLMAFGAFFLKVHPWRRLWRLTVYSRVTTSS 86
Score = 103 bits (220), Expect = 8e-022
Identities = 45/71 (63%), Positives = 52/71 (73%)
Frame = +1 / +2
Query: 139 PRLHIQEEGTQRHQGDQEVCTEGHGHHGRQDRCEAQQAHLEQRDQERAAEGSCEDRPQEE 318
PR+++QEEGT+ HQGDQEVC EGHG+ R AQQAHLEQR QE E C+D PQEE
Sbjct: 134 PRMYLQEEGTKCHQGDQEVCPEGHGNK*CPHRR*AQQAHLEQRHQECPEESPCQDCPQEE 313
Query: 319 R*GGCQGGTLL 351
R*GG GG +L
Sbjct: 314 R*GGR*GGAVL 346
Score = 101 bits (215), Expect = 4e-021
Identities = 51/130 (39%), Positives = 73/130 (56%)
Frame = -3 / -2
Query: 487 RFCCCKYKLGTL*RCGERDSLIGFVNDLGPQPFQALGRDLRDGDKGVEFLLGILLIVPLA 308
++ +Y L + * + + L+ +++LG Q F+ D + + V+ LL +LLIVPLA
Sbjct: 482 QYALSRYVLSSN*LKQQTEGLVLILHNLGTQTFKTFLGDFSNCHQRVQLLLSVLLIVPLA 303
Query: 307 GDPHTNPPRHXXXXXXXDVLVELHIDPDVRGAHGLLCKLPDLLDGVGXXXXXXXXXXXXX 128
G+P T+ PR DVLVEL++D D+ +HGLL KLPDLLDG+
Sbjct: 302 GNPDTDSPRDTPDAAAPDVLVELNVDADIICSHGLLGKLPDLLDGIWCLLLEGTSVEALV 123
Query: 127 XVDGVLPGDH 98
VDGVL G H
Sbjct: 122 EVDGVLAGHH 93
Score = 29.9 bits (59), Expect(3) = 5e-028
Identities = 10/12 (83%), Positives = 11/12 (91%)
Frame = -2 / -1
Query: 329 PPHRSSCGRSSH 294
PPHRSSCG+S H
Sbjct: 324 PPHRSSCGQS*H 289
Score = 24.4 bits (47), Expect(3) = 5e-028
Identities = 10/13 (76%), Positives = 11/13 (84%)
Frame = -1 / -3
Query: 387 KPSAGISATVTRE 349
+PS G SATVTRE
Sbjct: 382 RPSWGTSATVTRE 344
>gb|BF630877.3|BF630877 HVSMEb0014E22f Hordeum vulgare seedling shoot EST library
HVcDNA0002 (Dehydration stress) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEb0014E22f, mRNA sequence
Length = 593
Score = 215 bits (464), Expect = 2e-055
Identities = 93/130 (71%), Positives = 102/130 (78%)
Frame = +2 / +1
Query: 86 RKEEVVTREYTINLHKRLHGCTFKKKAPNAIKEIRKFAQKAMGTTDVRIDVKLNKHIWSS 265
RK+EVVTREYT+NLHKRLHGCTFKKKAPNAIKEIRKFAQKAMGT DVRIDVKLNKHIWSS
Sbjct: 85 RKDEVVTREYTVNLHKRLHGCTFKKKAPNAIKEIRKFAQKAMGTNDVRIDVKLNKHIWSS 264
Query: 266 GIXXXXXXXXXXXXXXXNDEEDAKEELYSLVTVAEIPAEGLKGLGTKVVDETD*AVAFST 445
GI NDEEDAKEELYSLVTVAE+P EGLKGLGTKVV++ D* +
Sbjct: 265 GIRSVPRRVRVRIARKRNDEEDAKEELYSLVTVAEVPQEGLKGLGTKVVEDED*TLCLLF 444
Query: 446 SLESS*FVFA 475
+*++ A
Sbjct: 445 QSVRT*YISA 474
Score = 107 bits (228), Expect(3) = 5e-028
Identities = 46/56 (82%), Positives = 47/56 (83%)
Frame = -1 / -1
Query: 258 QMCLLSFTSILTSVVPMAFCANFLISLMALGAFFLNVQPWRRLWRLMVYSLVTTSS 91
QMCLLS TS+ TS VPMAF ANFLISLMA GAFFL V PWRRLWRL VYS VTTSS
Sbjct: 257 QMCLLSLTSMRTSFVPMAFWANFLISLMAFGAFFLKVHPWRRLWRLTVYSRVTTSS 90
Score = 103 bits (220), Expect = 8e-022
Identities = 45/71 (63%), Positives = 52/71 (73%)
Frame = +1 / +3
Query: 139 PRLHIQEEGTQRHQGDQEVCTEGHGHHGRQDRCEAQQAHLEQRDQERAAEGSCEDRPQEE 318
PR+++QEEGT+ HQGDQEVC EGHG+ R AQQAHLEQR QE E C+D PQEE
Sbjct: 138 PRMYLQEEGTKCHQGDQEVCPEGHGNK*CPHRR*AQQAHLEQRHQECPEESPCQDCPQEE 317
Query: 319 R*GGCQGGTLL 351
R*GG GG +L
Sbjct: 318 R*GGR*GGAVL 350
Score = 101 bits (215), Expect = 4e-021
Identities = 51/130 (39%), Positives = 73/130 (56%)
Frame = -3 / -3
Query: 487 RFCCCKYKLGTL*RCGERDSLIGFVNDLGPQPFQALGRDLRDGDKGVEFLLGILLIVPLA 308
++ +Y L + * + + L+ +++LG Q F+ D + + V+ LL +LLIVPLA
Sbjct: 486 QYALSRYVLSSN*LKQQTEGLVLILHNLGTQTFKTFLGDFSNCHQRVQLLLSVLLIVPLA 307
Query: 307 GDPHTNPPRHXXXXXXXDVLVELHIDPDVRGAHGLLCKLPDLLDGVGXXXXXXXXXXXXX 128
G+P T+ PR DVLVEL++D D+ +HGLL KLPDLLDG+
Sbjct: 306 GNPDTDSPRDTPDAAAPDVLVELNVDADIICSHGLLGKLPDLLDGIWCLLLEGTSVEALV 127
Query: 127 XVDGVLPGDH 98
VDGVL G H
Sbjct: 126 EVDGVLAGHH 97
Score = 29.9 bits (59), Expect(3) = 5e-028
Identities = 10/12 (83%), Positives = 11/12 (91%)
Frame = -2 / -2
Query: 329 PPHRSSCGRSSH 294
PPHRSSCG+S H
Sbjct: 328 PPHRSSCGQS*H 293
Score = 24.4 bits (47), Expect(3) = 5e-028
Identities = 10/13 (76%), Positives = 11/13 (84%)
Frame = -1 / -1
Query: 387 KPSAGISATVTRE 349
+PS G SATVTRE
Sbjct: 386 RPSWGTSATVTRE 348
>gb|BF260619.3|BF260619 HVSMEf0022H22f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEf0022H22f, mRNA sequence
Length = 594
Score = 215 bits (464), Expect = 2e-055
Identities = 93/130 (71%), Positives = 102/130 (78%)
Frame = +2 / +3
Query: 86 RKEEVVTREYTINLHKRLHGCTFKKKAPNAIKEIRKFAQKAMGTTDVRIDVKLNKHIWSS 265
RK+EVVTREYT+NLHKRLHGCTFKKKAPNAIKEIRKFAQKAMGT DVRIDVKLNKHIWSS
Sbjct: 60 RKDEVVTREYTVNLHKRLHGCTFKKKAPNAIKEIRKFAQKAMGTNDVRIDVKLNKHIWSS 239
Query: 266 GIXXXXXXXXXXXXXXXNDEEDAKEELYSLVTVAEIPAEGLKGLGTKVVDETD*AVAFST 445
GI NDEEDAKEELYSLVTVAE+P EGLKGLGTKVV++ D* +
Sbjct: 240 GIRSVPRRVRVRIARKRNDEEDAKEELYSLVTVAEVPQEGLKGLGTKVVEDED*TLCLLF 419
Query: 446 SLESS*FVFA 475
+*++ A
Sbjct: 420 QSVRT*YISA 449
Score = 107 bits (228), Expect(3) = 5e-028
Identities = 46/56 (82%), Positives = 47/56 (83%)
Frame = -1 / -3
Query: 258 QMCLLSFTSILTSVVPMAFCANFLISLMALGAFFLNVQPWRRLWRLMVYSLVTTSS 91
QMCLLS TS+ TS VPMAF ANFLISLMA GAFFL V PWRRLWRL VYS VTTSS
Sbjct: 232 QMCLLSLTSMRTSFVPMAFWANFLISLMAFGAFFLKVHPWRRLWRLTVYSRVTTSS 65
Score = 103 bits (220), Expect = 8e-022
Identities = 45/71 (63%), Positives = 52/71 (73%)
Frame = +1 / +2
Query: 139 PRLHIQEEGTQRHQGDQEVCTEGHGHHGRQDRCEAQQAHLEQRDQERAAEGSCEDRPQEE 318
PR+++QEEGT+ HQGDQEVC EGHG+ R AQQAHLEQR QE E C+D PQEE
Sbjct: 113 PRMYLQEEGTKCHQGDQEVCPEGHGNK*CPHRR*AQQAHLEQRHQECPEESPCQDCPQEE 292
Query: 319 R*GGCQGGTLL 351
R*GG GG +L
Sbjct: 293 R*GGR*GGAVL 325
Score = 101 bits (215), Expect = 4e-021
Identities = 51/130 (39%), Positives = 73/130 (56%)
Frame = -3 / -2
Query: 487 RFCCCKYKLGTL*RCGERDSLIGFVNDLGPQPFQALGRDLRDGDKGVEFLLGILLIVPLA 308
++ +Y L + * + + L+ +++LG Q F+ D + + V+ LL +LLIVPLA
Sbjct: 461 QYALSRYVLSSN*LKQQTEGLVLILHNLGTQTFKTFLGDFSNCHQRVQLLLSVLLIVPLA 282
Query: 307 GDPHTNPPRHXXXXXXXDVLVELHIDPDVRGAHGLLCKLPDLLDGVGXXXXXXXXXXXXX 128
G+P T+ PR DVLVEL++D D+ +HGLL KLPDLLDG+
Sbjct: 281 GNPDTDSPRDTPDAAAPDVLVELNVDADIICSHGLLGKLPDLLDGIWCLLLEGTSVEALV 102
Query: 127 XVDGVLPGDH 98
VDGVL G H
Sbjct: 101 EVDGVLAGHH 72
Score = 29.9 bits (59), Expect(3) = 5e-028
Identities = 10/12 (83%), Positives = 11/12 (91%)
Frame = -2 / -1
Query: 329 PPHRSSCGRSSH 294
PPHRSSCG+S H
Sbjct: 303 PPHRSSCGQS*H 268
Score = 24.4 bits (47), Expect(3) = 5e-028
Identities = 10/13 (76%), Positives = 11/13 (84%)
Frame = -1 / -3
Query: 387 KPSAGISATVTRE 349
+PS G SATVTRE
Sbjct: 361 RPSWGTSATVTRE 323
>gb|BE060628.3|BE060628 HVSMEg0012N02f Hordeum vulgare pre-anthesis spike EST library
HVcDNA0008 (white to yellow anther) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEg0012N02f, mRNA sequence
Length = 632
Score = 215 bits (464), Expect = 2e-055
Identities = 93/130 (71%), Positives = 102/130 (78%)
Frame = +2 / +2
Query: 86 RKEEVVTREYTINLHKRLHGCTFKKKAPNAIKEIRKFAQKAMGTTDVRIDVKLNKHIWSS 265
RK+EVVTREYT+NLHKRLHGCTFKKKAPNAIKEIRKFAQKAMGT DVRIDVKLNKHIWSS
Sbjct: 71 RKDEVVTREYTVNLHKRLHGCTFKKKAPNAIKEIRKFAQKAMGTNDVRIDVKLNKHIWSS 250
Query: 266 GIXXXXXXXXXXXXXXXNDEEDAKEELYSLVTVAEIPAEGLKGLGTKVVDETD*AVAFST 445
GI NDEEDAKEELYSLVTVAE+P EGLKGLGTKVV++ D* +
Sbjct: 251 GIRSVPRRVRVRIARKRNDEEDAKEELYSLVTVAEVPQEGLKGLGTKVVEDED*TLCLLF 430
Query: 446 SLESS*FVFA 475
+*++ A
Sbjct: 431 QSGRT*YISA 460
Score = 107 bits (228), Expect(3) = 5e-028
Identities = 46/56 (82%), Positives = 47/56 (83%)
Frame = -1 / -3
Query: 258 QMCLLSFTSILTSVVPMAFCANFLISLMALGAFFLNVQPWRRLWRLMVYSLVTTSS 91
QMCLLS TS+ TS VPMAF ANFLISLMA GAFFL V PWRRLWRL VYS VTTSS
Sbjct: 243 QMCLLSLTSMRTSFVPMAFWANFLISLMAFGAFFLKVHPWRRLWRLTVYSRVTTSS 76
Score = 103 bits (220), Expect = 8e-022
Identities = 45/71 (63%), Positives = 52/71 (73%)
Frame = +1 / +1
Query: 139 PRLHIQEEGTQRHQGDQEVCTEGHGHHGRQDRCEAQQAHLEQRDQERAAEGSCEDRPQEE 318
PR+++QEEGT+ HQGDQEVC EGHG+ R AQQAHLEQR QE E C+D PQEE
Sbjct: 124 PRMYLQEEGTKCHQGDQEVCPEGHGNK*CPHRR*AQQAHLEQRHQECPEESPCQDCPQEE 303
Query: 319 R*GGCQGGTLL 351
R*GG GG +L
Sbjct: 304 R*GGR*GGAVL 336
Score = 102 bits (217), Expect = 2e-021
Identities = 51/130 (39%), Positives = 73/130 (56%)
Frame = -3 / -2
Query: 487 RFCCCKYKLGTL*RCGERDSLIGFVNDLGPQPFQALGRDLRDGDKGVEFLLGILLIVPLA 308
++ +Y L + * + + L+ +++LG Q F+ D + + V+ LL +LLIVPLA
Sbjct: 472 QYALSRYVLSST*LKQQTEGLVLILHNLGTQTFKTFLGDFSNCHQRVQLLLSVLLIVPLA 293
Query: 307 GDPHTNPPRHXXXXXXXDVLVELHIDPDVRGAHGLLCKLPDLLDGVGXXXXXXXXXXXXX 128
G+P T+ PR DVLVEL++D D+ +HGLL KLPDLLDG+
Sbjct: 292 GNPDTDSPRDTPDAAAPDVLVELNVDADIICSHGLLGKLPDLLDGIWCLLLEGTSVEALV 113
Query: 127 XVDGVLPGDH 98
VDGVL G H
Sbjct: 112 EVDGVLAGHH 83
Score = 29.9 bits (59), Expect(3) = 5e-028
Identities = 10/12 (83%), Positives = 11/12 (91%)
Frame = -2 / -1
Query: 329 PPHRSSCGRSSH 294
PPHRSSCG+S H
Sbjct: 314 PPHRSSCGQS*H 279
Score = 24.4 bits (47), Expect(3) = 5e-028
Identities = 10/13 (76%), Positives = 11/13 (84%)
Frame = -1 / -3
Query: 387 KPSAGISATVTRE 349
+PS G SATVTRE
Sbjct: 372 RPSWGTSATVTRE 334
>gb|BG344853.2|BG344853 HVSMEg0016G20f Hordeum vulgare pre-anthesis spike EST library
HVcDNA0008 (white to yellow anther) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEg0016G20f, mRNA sequence
Length = 645
Score = 215 bits (464), Expect = 2e-055
Identities = 93/130 (71%), Positives = 102/130 (78%)
Frame = +2 / +3
Query: 86 RKEEVVTREYTINLHKRLHGCTFKKKAPNAIKEIRKFAQKAMGTTDVRIDVKLNKHIWSS 265
RK+EVVTREYT+NLHKRLHGCTFKKKAPNAIKEIRKFAQKAMGT DVRIDVKLNKHIWSS
Sbjct: 96 RKDEVVTREYTVNLHKRLHGCTFKKKAPNAIKEIRKFAQKAMGTNDVRIDVKLNKHIWSS 275
Query: 266 GIXXXXXXXXXXXXXXXNDEEDAKEELYSLVTVAEIPAEGLKGLGTKVVDETD*AVAFST 445
GI NDEEDAKEELYSLVTVAE+P EGLKGLGTKVV++ D* +
Sbjct: 276 GIRSVPRRVRVRIARKRNDEEDAKEELYSLVTVAEVPQEGLKGLGTKVVEDED*TLCLLF 455
Query: 446 SLESS*FVFA 475
+*++ A
Sbjct: 456 QSVRT*YISA 485
Score = 107 bits (228), Expect(3) = 5e-028
Identities = 46/56 (82%), Positives = 47/56 (83%)
Frame = -1 / -3
Query: 258 QMCLLSFTSILTSVVPMAFCANFLISLMALGAFFLNVQPWRRLWRLMVYSLVTTSS 91
QMCLLS TS+ TS VPMAF ANFLISLMA GAFFL V PWRRLWRL VYS VTTSS
Sbjct: 268 QMCLLSLTSMRTSFVPMAFWANFLISLMAFGAFFLKVHPWRRLWRLTVYSRVTTSS 101
Score = 103 bits (220), Expect = 8e-022
Identities = 45/71 (63%), Positives = 52/71 (73%)
Frame = +1 / +2
Query: 139 PRLHIQEEGTQRHQGDQEVCTEGHGHHGRQDRCEAQQAHLEQRDQERAAEGSCEDRPQEE 318
PR+++QEEGT+ HQGDQEVC EGHG+ R AQQAHLEQR QE E C+D PQEE
Sbjct: 149 PRMYLQEEGTKCHQGDQEVCPEGHGNK*CPHRR*AQQAHLEQRHQECPEESPCQDCPQEE 328
Query: 319 R*GGCQGGTLL 351
R*GG GG +L
Sbjct: 329 R*GGR*GGAVL 361
Score = 101 bits (215), Expect = 4e-021
Identities = 51/130 (39%), Positives = 73/130 (56%)
Frame = -3 / -2
Query: 487 RFCCCKYKLGTL*RCGERDSLIGFVNDLGPQPFQALGRDLRDGDKGVEFLLGILLIVPLA 308
++ +Y L + * + + L+ +++LG Q F+ D + + V+ LL +LLIVPLA
Sbjct: 497 QYALSRYVLSSN*LKQQTEGLVLILHNLGTQTFKTFLGDFSNCHQRVQLLLSVLLIVPLA 318
Query: 307 GDPHTNPPRHXXXXXXXDVLVELHIDPDVRGAHGLLCKLPDLLDGVGXXXXXXXXXXXXX 128
G+P T+ PR DVLVEL++D D+ +HGLL KLPDLLDG+
Sbjct: 317 GNPDTDSPRDTPDAAAPDVLVELNVDADIICSHGLLGKLPDLLDGIWCLLLEGTSVEALV 138
Query: 127 XVDGVLPGDH 98
VDGVL G H
Sbjct: 137 EVDGVLAGHH 108
Score = 29.9 bits (59), Expect(3) = 5e-028
Identities = 10/12 (83%), Positives = 11/12 (91%)
Frame = -2 / -1
Query: 329 PPHRSSCGRSSH 294
PPHRSSCG+S H
Sbjct: 339 PPHRSSCGQS*H 304
Score = 24.4 bits (47), Expect(3) = 5e-028
Identities = 10/13 (76%), Positives = 11/13 (84%)
Frame = -1 / -3
Query: 387 KPSAGISATVTRE 349
+PS G SATVTRE
Sbjct: 397 RPSWGTSATVTRE 359
>gb|BE455617.3|BE455617 HVSMEg0018D20f Hordeum vulgare pre-anthesis spike EST library
HVcDNA0008 (white to yellow anther) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEg0018D20f, mRNA sequence
Length = 582
Score = 215 bits (464), Expect = 2e-055
Identities = 93/130 (71%), Positives = 102/130 (78%)
Frame = +2 / +1
Query: 86 RKEEVVTREYTINLHKRLHGCTFKKKAPNAIKEIRKFAQKAMGTTDVRIDVKLNKHIWSS 265
RK+EVVTREYT+NLHKRLHGCTFKKKAPNAIKEIRKFAQKAMGT DVRIDVKLNKHIWSS
Sbjct: 91 RKDEVVTREYTVNLHKRLHGCTFKKKAPNAIKEIRKFAQKAMGTNDVRIDVKLNKHIWSS 270
Query: 266 GIXXXXXXXXXXXXXXXNDEEDAKEELYSLVTVAEIPAEGLKGLGTKVVDETD*AVAFST 445
GI NDEEDAKEELYSLVTVAE+P EGLKGLGTKVV++ D* +
Sbjct: 271 GIRSVPRRVRVRIARKRNDEEDAKEELYSLVTVAEVPQEGLKGLGTKVVEDED*TLCLLF 450
Query: 446 SLESS*FVFA 475
+*++ A
Sbjct: 451 QSVRT*YISA 480
Score = 107 bits (228), Expect(3) = 5e-028
Identities = 46/56 (82%), Positives = 47/56 (83%)
Frame = -1 / -2
Query: 258 QMCLLSFTSILTSVVPMAFCANFLISLMALGAFFLNVQPWRRLWRLMVYSLVTTSS 91
QMCLLS TS+ TS VPMAF ANFLISLMA GAFFL V PWRRLWRL VYS VTTSS
Sbjct: 263 QMCLLSLTSMRTSFVPMAFWANFLISLMAFGAFFLKVHPWRRLWRLTVYSRVTTSS 96
Score = 103 bits (220), Expect = 8e-022
Identities = 45/71 (63%), Positives = 52/71 (73%)
Frame = +1 / +3
Query: 139 PRLHIQEEGTQRHQGDQEVCTEGHGHHGRQDRCEAQQAHLEQRDQERAAEGSCEDRPQEE 318
PR+++QEEGT+ HQGDQEVC EGHG+ R AQQAHLEQR QE E C+D PQEE
Sbjct: 144 PRMYLQEEGTKCHQGDQEVCPEGHGNK*CPHRR*AQQAHLEQRHQECPEESPCQDCPQEE 323
Query: 319 R*GGCQGGTLL 351
R*GG GG +L
Sbjct: 324 R*GGR*GGAVL 356
Score = 101 bits (215), Expect = 4e-021
Identities = 51/130 (39%), Positives = 73/130 (56%)
Frame = -3 / -1
Query: 487 RFCCCKYKLGTL*RCGERDSLIGFVNDLGPQPFQALGRDLRDGDKGVEFLLGILLIVPLA 308
++ +Y L + * + + L+ +++LG Q F+ D + + V+ LL +LLIVPLA
Sbjct: 492 QYALSRYVLSSN*LKQQTEGLVLILHNLGTQTFKTFLGDFSNCHQRVQLLLSVLLIVPLA 313
Query: 307 GDPHTNPPRHXXXXXXXDVLVELHIDPDVRGAHGLLCKLPDLLDGVGXXXXXXXXXXXXX 128
G+P T+ PR DVLVEL++D D+ +HGLL KLPDLLDG+
Sbjct: 312 GNPDTDSPRDTPDAAAPDVLVELNVDADIICSHGLLGKLPDLLDGIWCLLLEGTSVEALV 133
Query: 127 XVDGVLPGDH 98
VDGVL G H
Sbjct: 132 EVDGVLAGHH 103
Score = 29.9 bits (59), Expect(3) = 5e-028
Identities = 10/12 (83%), Positives = 11/12 (91%)
Frame = -2 / -3
Query: 329 PPHRSSCGRSSH 294
PPHRSSCG+S H
Sbjct: 334 PPHRSSCGQS*H 299
Score = 24.4 bits (47), Expect(3) = 5e-028
Identities = 10/13 (76%), Positives = 11/13 (84%)
Frame = -1 / -2
Query: 387 KPSAGISATVTRE 349
+PS G SATVTRE
Sbjct: 392 RPSWGTSATVTRE 354
>gb|BE196465.3|BE196465 HVSMEh0092F22f Hordeum vulgare 5-45 DAP spike EST library
HVcDNA0009 (5 to 45 DAP) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEh0092F22f, mRNA sequence
Length = 887
Score = 215 bits (464), Expect = 2e-055
Identities = 93/130 (71%), Positives = 102/130 (78%)
Frame = +2 / +1
Query: 86 RKEEVVTREYTINLHKRLHGCTFKKKAPNAIKEIRKFAQKAMGTTDVRIDVKLNKHIWSS 265
RK+EVVTREYT+NLHKRLHGCTFKKKAPNAIKEIRKFAQKAMGT DVRIDVKLNKHIWSS
Sbjct: 91 RKDEVVTREYTVNLHKRLHGCTFKKKAPNAIKEIRKFAQKAMGTNDVRIDVKLNKHIWSS 270
Query: 266 GIXXXXXXXXXXXXXXXNDEEDAKEELYSLVTVAEIPAEGLKGLGTKVVDETD*AVAFST 445
GI NDEEDAKEELYSLVTVAE+P EGLKGLGTKVV++ D* +
Sbjct: 271 GIRSVPRRVRVRIARKRNDEEDAKEELYSLVTVAEVPQEGLKGLGTKVVEDED*TLCLLF 450
Query: 446 SLESS*FVFA 475
+*++ A
Sbjct: 451 QSVRT*YISA 480
Score = 107 bits (228), Expect(3) = 5e-028
Identities = 46/56 (82%), Positives = 47/56 (83%)
Frame = -1 / -1
Query: 258 QMCLLSFTSILTSVVPMAFCANFLISLMALGAFFLNVQPWRRLWRLMVYSLVTTSS 91
QMCLLS TS+ TS VPMAF ANFLISLMA GAFFL V PWRRLWRL VYS VTTSS
Sbjct: 263 QMCLLSLTSMRTSFVPMAFWANFLISLMAFGAFFLKVHPWRRLWRLTVYSRVTTSS 96
Score = 103 bits (220), Expect = 8e-022
Identities = 45/71 (63%), Positives = 52/71 (73%)
Frame = +1 / +3
Query: 139 PRLHIQEEGTQRHQGDQEVCTEGHGHHGRQDRCEAQQAHLEQRDQERAAEGSCEDRPQEE 318
PR+++QEEGT+ HQGDQEVC EGHG+ R AQQAHLEQR QE E C+D PQEE
Sbjct: 144 PRMYLQEEGTKCHQGDQEVCPEGHGNK*CPHRR*AQQAHLEQRHQECPEESPCQDCPQEE 323
Query: 319 R*GGCQGGTLL 351
R*GG GG +L
Sbjct: 324 R*GGR*GGAVL 356
Score = 101 bits (215), Expect = 4e-021
Identities = 51/130 (39%), Positives = 73/130 (56%)
Frame = -3 / -3
Query: 487 RFCCCKYKLGTL*RCGERDSLIGFVNDLGPQPFQALGRDLRDGDKGVEFLLGILLIVPLA 308
++ +Y L + * + + L+ +++LG Q F+ D + + V+ LL +LLIVPLA
Sbjct: 492 QYALSRYVLSSN*LKQQTEGLVLILHNLGTQTFKTFLGDFSNCHQRVQLLLSVLLIVPLA 313
Query: 307 GDPHTNPPRHXXXXXXXDVLVELHIDPDVRGAHGLLCKLPDLLDGVGXXXXXXXXXXXXX 128
G+P T+ PR DVLVEL++D D+ +HGLL KLPDLLDG+
Sbjct: 312 GNPDTDSPRDTPDAAAPDVLVELNVDADIICSHGLLGKLPDLLDGIWCLLLEGTSVEALV 133
Query: 127 XVDGVLPGDH 98
VDGVL G H
Sbjct: 132 EVDGVLAGHH 103
Score = 29.9 bits (59), Expect(3) = 5e-028
Identities = 10/12 (83%), Positives = 11/12 (91%)
Frame = -2 / -2
Query: 329 PPHRSSCGRSSH 294
PPHRSSCG+S H
Sbjct: 334 PPHRSSCGQS*H 299
Score = 24.4 bits (47), Expect(3) = 5e-028
Identities = 10/13 (76%), Positives = 11/13 (84%)
Frame = -1 / -1
Query: 387 KPSAGISATVTRE 349
+PS G SATVTRE
Sbjct: 392 RPSWGTSATVTRE 354
>gb|AV915397.1|AV915397 AV915397 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags14d20 5', mRNA sequence
Length = 615
Score = 215 bits (464), Expect = 2e-055
Identities = 93/130 (71%), Positives = 102/130 (78%)
Frame = +2 / +2
Query: 86 RKEEVVTREYTINLHKRLHGCTFKKKAPNAIKEIRKFAQKAMGTTDVRIDVKLNKHIWSS 265
RK+EVVTREYT+NLHKRLHGCTFKKKAPNAIKEIRKFAQKAMGT DVRIDVKLNKHIWSS
Sbjct: 95 RKDEVVTREYTVNLHKRLHGCTFKKKAPNAIKEIRKFAQKAMGTNDVRIDVKLNKHIWSS 274
Query: 266 GIXXXXXXXXXXXXXXXNDEEDAKEELYSLVTVAEIPAEGLKGLGTKVVDETD*AVAFST 445
GI NDEEDAKEELYSLVTVAE+P EGLKGLGTKVV++ D* +
Sbjct: 275 GIRSVPRRVRVRIARKRNDEEDAKEELYSLVTVAEVPQEGLKGLGTKVVEDED*TLCLLF 454
Query: 446 SLESS*FVFA 475
+*++ A
Sbjct: 455 QSVRT*YISA 484
Score = 107 bits (228), Expect(3) = 6e-027
Identities = 46/56 (82%), Positives = 47/56 (83%)
Frame = -1 / -1
Query: 258 QMCLLSFTSILTSVVPMAFCANFLISLMALGAFFLNVQPWRRLWRLMVYSLVTTSS 91
QMCLLS TS+ TS VPMAF ANFLISLMA GAFFL V PWRRLWRL VYS VTTSS
Sbjct: 267 QMCLLSLTSMRTSFVPMAFWANFLISLMAFGAFFLKVHPWRRLWRLTVYSRVTTSS 100
Score = 101 bits (215), Expect = 4e-021
Identities = 44/71 (61%), Positives = 51/71 (71%)
Frame = +1 / +1
Query: 139 PRLHIQEEGTQRHQGDQEVCTEGHGHHGRQDRCEAQQAHLEQRDQERAAEGSCEDRPQEE 318
PR+++QEEGT+ HQGDQEVC EGHG+ R AQQAHLEQR QE E C+D PQEE
Sbjct: 148 PRMYLQEEGTKCHQGDQEVCPEGHGNK*CPHRR*AQQAHLEQRHQECPEESPCQDCPQEE 327
Query: 319 R*GGCQGGTLL 351
R GG GG +L
Sbjct: 328 RRGGR*GGAVL 360
Score = 100 bits (212), Expect = 1e-020
Identities = 50/125 (40%), Positives = 71/125 (56%)
Frame = -3 / -3
Query: 472 KYKLGTL*RCGERDSLIGFVNDLGPQPFQALGRDLRDGDKGVEFLLGILLIVPLAGDPHT 293
+Y L + * + + L+ +++LG Q F+ D + + V+ LL +LL+VPLAG+P T
Sbjct: 481 RYVLSSN*LKQQTEGLVLILHNLGTQTFKTFLGDFSNCHQRVQLLLSVLLVVPLAGNPDT 302
Query: 292 NPPRHXXXXXXXDVLVELHIDPDVRGAHGLLCKLPDLLDGVGXXXXXXXXXXXXXXVDGV 113
+ PR DVLVEL++D D+ +HGLL KLPDLLDG+ VDGV
Sbjct: 301 DSPRDTPDAAAPDVLVELNVDADIICSHGLLGKLPDLLDGIWCLLLEGTSVEALVEVDGV 122
Query: 112 LPGDH 98
L G H
Sbjct: 121 LAGHH 107
Score = 26.3 bits (51), Expect(3) = 6e-027
Identities = 9/12 (75%), Positives = 10/12 (83%)
Frame = -2 / -2
Query: 329 PPHRSSCGRSSH 294
PP RSSCG+S H
Sbjct: 338 PPRRSSCGQS*H 303
Score = 24.4 bits (47), Expect(3) = 6e-027
Identities = 10/13 (76%), Positives = 11/13 (84%)
Frame = -1 / -1
Query: 387 KPSAGISATVTRE 349
+PS G SATVTRE
Sbjct: 396 RPSWGTSATVTRE 358
>gb|AV919065.1|AV919065 AV919065 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags4e16 3', mRNA sequence
Length = 540
Score = 215 bits (464), Expect = 2e-055
Identities = 93/130 (71%), Positives = 102/130 (78%)
Frame = +2 / -2
Query: 86 RKEEVVTREYTINLHKRLHGCTFKKKAPNAIKEIRKFAQKAMGTTDVRIDVKLNKHIWSS 265
RK+EVVTREYT+NLHKRLHGCTFKKKAPNAIKEIRKFAQKAMGT DVRIDVKLNKHIWSS
Sbjct: 455 RKDEVVTREYTVNLHKRLHGCTFKKKAPNAIKEIRKFAQKAMGTNDVRIDVKLNKHIWSS 276
Query: 266 GIXXXXXXXXXXXXXXXNDEEDAKEELYSLVTVAEIPAEGLKGLGTKVVDETD*AVAFST 445
GI NDEEDAKEELYSLVTVAE+P EGLKGLGTKVV++ D* +
Sbjct: 275 GIRSVPRRVRVRIARKRNDEEDAKEELYSLVTVAEVPQEGLKGLGTKVVEDED*TLCLLF 96
Query: 446 SLESS*FVFA 475
+*++ A
Sbjct: 95 QSVRT*YISA 66
Score = 107 bits (228), Expect(3) = 6e-027
Identities = 46/56 (82%), Positives = 47/56 (83%)
Frame = -1 / +1
Query: 258 QMCLLSFTSILTSVVPMAFCANFLISLMALGAFFLNVQPWRRLWRLMVYSLVTTSS 91
QMCLLS TS+ TS VPMAF ANFLISLMA GAFFL V PWRRLWRL VYS VTTSS
Sbjct: 283 QMCLLSLTSMRTSFVPMAFWANFLISLMAFGAFFLKVHPWRRLWRLTVYSRVTTSS 450
Score = 101 bits (215), Expect = 4e-021
Identities = 44/71 (61%), Positives = 51/71 (71%)
Frame = +1 / -1
Query: 139 PRLHIQEEGTQRHQGDQEVCTEGHGHHGRQDRCEAQQAHLEQRDQERAAEGSCEDRPQEE 318
PR+++QEEGT+ HQGDQEVC EGHG+ R AQQAHLEQR QE E C+D PQEE
Sbjct: 402 PRMYLQEEGTKCHQGDQEVCPEGHGNK*CPHRR*AQQAHLEQRHQECPEESPCQDCPQEE 223
Query: 319 R*GGCQGGTLL 351
R GG GG +L
Sbjct: 222 RRGGR*GGAVL 190
Score = 100 bits (212), Expect = 1e-020
Identities = 50/125 (40%), Positives = 71/125 (56%)
Frame = -3 / +3
Query: 472 KYKLGTL*RCGERDSLIGFVNDLGPQPFQALGRDLRDGDKGVEFLLGILLIVPLAGDPHT 293
+Y L + * + + L+ +++LG Q F+ D + + V+ LL +LL+VPLAG+P T
Sbjct: 69 RYVLSSN*LKQQTEGLVLILHNLGTQTFKTFLGDFSNCHQRVQLLLSVLLVVPLAGNPDT 248
Query: 292 NPPRHXXXXXXXDVLVELHIDPDVRGAHGLLCKLPDLLDGVGXXXXXXXXXXXXXXVDGV 113
+ PR DVLVEL++D D+ +HGLL KLPDLLDG+ VDGV
Sbjct: 249 DSPRDTPDAAAPDVLVELNVDADIICSHGLLGKLPDLLDGIWCLLLEGTSVEALVEVDGV 428
Query: 112 LPGDH 98
L G H
Sbjct: 429 LAGHH 443
Score = 26.3 bits (51), Expect(3) = 6e-027
Identities = 9/12 (75%), Positives = 10/12 (83%)
Frame = -2 / +2
Query: 329 PPHRSSCGRSSH 294
PP RSSCG+S H
Sbjct: 212 PPRRSSCGQS*H 247
Score = 24.4 bits (47), Expect(3) = 6e-027
Identities = 10/13 (76%), Positives = 11/13 (84%)
Frame = -1 / +1
Query: 387 KPSAGISATVTRE 349
+PS G SATVTRE
Sbjct: 154 RPSWGTSATVTRE 192
>gb|AV919098.1|AV919098 AV919098 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags4i05 3', mRNA sequence
Length = 588
Score = 215 bits (464), Expect = 2e-055
Identities = 93/130 (71%), Positives = 102/130 (78%)
Frame = +2 / -2
Query: 86 RKEEVVTREYTINLHKRLHGCTFKKKAPNAIKEIRKFAQKAMGTTDVRIDVKLNKHIWSS 265
RK+EVVTREYT+NLHKRLHGCTFKKKAPNAIKEIRKFAQKAMGT DVRIDVKLNKHIWSS
Sbjct: 494 RKDEVVTREYTVNLHKRLHGCTFKKKAPNAIKEIRKFAQKAMGTNDVRIDVKLNKHIWSS 315
Query: 266 GIXXXXXXXXXXXXXXXNDEEDAKEELYSLVTVAEIPAEGLKGLGTKVVDETD*AVAFST 445
GI NDEEDAKEELYSLVTVAE+P EGLKGLGTKVV++ D* +
Sbjct: 314 GIRSVPRRVRVRIARKRNDEEDAKEELYSLVTVAEVPQEGLKGLGTKVVEDED*TLCLLF 135
Query: 446 SLESS*FVFA 475
+*++ A
Sbjct: 134 QSVRT*YISA 105
Score = 107 bits (228), Expect(3) = 6e-027
Identities = 46/56 (82%), Positives = 47/56 (83%)
Frame = -1 / +1
Query: 258 QMCLLSFTSILTSVVPMAFCANFLISLMALGAFFLNVQPWRRLWRLMVYSLVTTSS 91
QMCLLS TS+ TS VPMAF ANFLISLMA GAFFL V PWRRLWRL VYS VTTSS
Sbjct: 322 QMCLLSLTSMRTSFVPMAFWANFLISLMAFGAFFLKVHPWRRLWRLTVYSRVTTSS 489
Score = 101 bits (215), Expect = 4e-021
Identities = 44/71 (61%), Positives = 51/71 (71%)
Frame = +1 / -1
Query: 139 PRLHIQEEGTQRHQGDQEVCTEGHGHHGRQDRCEAQQAHLEQRDQERAAEGSCEDRPQEE 318
PR+++QEEGT+ HQGDQEVC EGHG+ R AQQAHLEQR QE E C+D PQEE
Sbjct: 441 PRMYLQEEGTKCHQGDQEVCPEGHGNK*CPHRR*AQQAHLEQRHQECPEESPCQDCPQEE 262
Query: 319 R*GGCQGGTLL 351
R GG GG +L
Sbjct: 261 RRGGR*GGAVL 229
Score = 100 bits (212), Expect = 1e-020
Identities = 50/125 (40%), Positives = 71/125 (56%)
Frame = -3 / +3
Query: 472 KYKLGTL*RCGERDSLIGFVNDLGPQPFQALGRDLRDGDKGVEFLLGILLIVPLAGDPHT 293
+Y L + * + + L+ +++LG Q F+ D + + V+ LL +LL+VPLAG+P T
Sbjct: 108 RYVLSSN*LKQQTEGLVLILHNLGTQTFKTFLGDFSNCHQRVQLLLSVLLVVPLAGNPDT 287
Query: 292 NPPRHXXXXXXXDVLVELHIDPDVRGAHGLLCKLPDLLDGVGXXXXXXXXXXXXXXVDGV 113
+ PR DVLVEL++D D+ +HGLL KLPDLLDG+ VDGV
Sbjct: 288 DSPRDTPDAAAPDVLVELNVDADIICSHGLLGKLPDLLDGIWCLLLEGTSVEALVEVDGV 467
Query: 112 LPGDH 98
L G H
Sbjct: 468 LAGHH 482
Score = 26.3 bits (51), Expect(3) = 6e-027
Identities = 9/12 (75%), Positives = 10/12 (83%)
Frame = -2 / +2
Query: 329 PPHRSSCGRSSH 294
PP RSSCG+S H
Sbjct: 251 PPRRSSCGQS*H 286
Score = 24.4 bits (47), Expect(3) = 6e-027
Identities = 10/13 (76%), Positives = 11/13 (84%)
Frame = -1 / +1
Query: 387 KPSAGISATVTRE 349
+PS G SATVTRE
Sbjct: 193 RPSWGTSATVTRE 231
>gb|AV920486.1|AV920486 AV920486 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags14d20 3', mRNA sequence
Length = 586
Score = 215 bits (464), Expect = 2e-055
Identities = 93/130 (71%), Positives = 102/130 (78%)
Frame = +2 / -1
Query: 86 RKEEVVTREYTINLHKRLHGCTFKKKAPNAIKEIRKFAQKAMGTTDVRIDVKLNKHIWSS 265
RK+EVVTREYT+NLHKRLHGCTFKKKAPNAIKEIRKFAQKAMGT DVRIDVKLNKHIWSS
Sbjct: 493 RKDEVVTREYTVNLHKRLHGCTFKKKAPNAIKEIRKFAQKAMGTNDVRIDVKLNKHIWSS 314
Query: 266 GIXXXXXXXXXXXXXXXNDEEDAKEELYSLVTVAEIPAEGLKGLGTKVVDETD*AVAFST 445
GI NDEEDAKEELYSLVTVAE+P EGLKGLGTKVV++ D* +
Sbjct: 313 GIRSVPRRVRVRIARKRNDEEDAKEELYSLVTVAEVPQEGLKGLGTKVVEDED*TLCLLF 134
Query: 446 SLESS*FVFA 475
+*++ A
Sbjct: 133 QSVRT*YISA 104
Score = 107 bits (228), Expect(3) = 6e-027
Identities = 46/56 (82%), Positives = 47/56 (83%)
Frame = -1 / +3
Query: 258 QMCLLSFTSILTSVVPMAFCANFLISLMALGAFFLNVQPWRRLWRLMVYSLVTTSS 91
QMCLLS TS+ TS VPMAF ANFLISLMA GAFFL V PWRRLWRL VYS VTTSS
Sbjct: 321 QMCLLSLTSMRTSFVPMAFWANFLISLMAFGAFFLKVHPWRRLWRLTVYSRVTTSS 488
Score = 101 bits (215), Expect = 4e-021
Identities = 44/71 (61%), Positives = 51/71 (71%)
Frame = +1 / -3
Query: 139 PRLHIQEEGTQRHQGDQEVCTEGHGHHGRQDRCEAQQAHLEQRDQERAAEGSCEDRPQEE 318
PR+++QEEGT+ HQGDQEVC EGHG+ R AQQAHLEQR QE E C+D PQEE
Sbjct: 440 PRMYLQEEGTKCHQGDQEVCPEGHGNK*CPHRR*AQQAHLEQRHQECPEESPCQDCPQEE 261
Query: 319 R*GGCQGGTLL 351
R GG GG +L
Sbjct: 260 RRGGR*GGAVL 228
Score = 100 bits (212), Expect = 1e-020
Identities = 50/125 (40%), Positives = 71/125 (56%)
Frame = -3 / +2
Query: 472 KYKLGTL*RCGERDSLIGFVNDLGPQPFQALGRDLRDGDKGVEFLLGILLIVPLAGDPHT 293
+Y L + * + + L+ +++LG Q F+ D + + V+ LL +LL+VPLAG+P T
Sbjct: 107 RYVLSSN*LKQQTEGLVLILHNLGTQTFKTFLGDFSNCHQRVQLLLSVLLVVPLAGNPDT 286
Query: 292 NPPRHXXXXXXXDVLVELHIDPDVRGAHGLLCKLPDLLDGVGXXXXXXXXXXXXXXVDGV 113
+ PR DVLVEL++D D+ +HGLL KLPDLLDG+ VDGV
Sbjct: 287 DSPRDTPDAAAPDVLVELNVDADIICSHGLLGKLPDLLDGIWCLLLEGTSVEALVEVDGV 466
Query: 112 LPGDH 98
L G H
Sbjct: 467 LAGHH 481
Score = 26.3 bits (51), Expect(3) = 6e-027
Identities = 9/12 (75%), Positives = 10/12 (83%)
Frame = -2 / +1
Query: 329 PPHRSSCGRSSH 294
PP RSSCG+S H
Sbjct: 250 PPRRSSCGQS*H 285
Score = 24.4 bits (47), Expect(3) = 6e-027
Identities = 10/13 (76%), Positives = 11/13 (84%)
Frame = -1 / +3
Query: 387 KPSAGISATVTRE 349
+PS G SATVTRE
Sbjct: 192 RPSWGTSATVTRE 230
>gb|BM444065.1|BM444065 EBem09_SQ004_B03_R embryo, 1 Day germination, no treatment, cv
Optic, EBem09 Hordeum vulgare subsp. vulgare cDNA clone
EBem09_SQ004_B03 5', mRNA sequence
Length = 528
Score = 215 bits (464), Expect = 2e-055
Identities = 93/130 (71%), Positives = 102/130 (78%)
Frame = +2 / +2
Query: 86 RKEEVVTREYTINLHKRLHGCTFKKKAPNAIKEIRKFAQKAMGTTDVRIDVKLNKHIWSS 265
RK+EVVTREYT+NLHKRLHGCTFKKKAPNAIKEIRKFAQKAMGT DVRIDVKLNKHIWSS
Sbjct: 38 RKDEVVTREYTVNLHKRLHGCTFKKKAPNAIKEIRKFAQKAMGTNDVRIDVKLNKHIWSS 217
Query: 266 GIXXXXXXXXXXXXXXXNDEEDAKEELYSLVTVAEIPAEGLKGLGTKVVDETD*AVAFST 445
GI NDEEDAKEELYSLVTVAE+P EGLKGLGTKVV++ D* +
Sbjct: 218 GIRSVPRRVRVRIARKRNDEEDAKEELYSLVTVAEVPQEGLKGLGTKVVEDED*TLCLLF 397
Query: 446 SLESS*FVFA 475
+*++ A
Sbjct: 398 QSVRT*YISA 427
Score = 107 bits (228), Expect(3) = 6e-027
Identities = 46/56 (82%), Positives = 47/56 (83%)
Frame = -1 / -1
Query: 258 QMCLLSFTSILTSVVPMAFCANFLISLMALGAFFLNVQPWRRLWRLMVYSLVTTSS 91
QMCLLS TS+ TS VPMAF ANFLISLMA GAFFL V PWRRLWRL VYS VTTSS
Sbjct: 210 QMCLLSLTSMRTSFVPMAFWANFLISLMAFGAFFLKVHPWRRLWRLTVYSRVTTSS 43
Score = 101 bits (215), Expect = 4e-021
Identities = 44/71 (61%), Positives = 51/71 (71%)
Frame = +1 / +1
Query: 139 PRLHIQEEGTQRHQGDQEVCTEGHGHHGRQDRCEAQQAHLEQRDQERAAEGSCEDRPQEE 318
PR+++QEEGT+ HQGDQEVC EGHG+ R AQQAHLEQR QE E C+D PQEE
Sbjct: 91 PRMYLQEEGTKCHQGDQEVCPEGHGNK*CPHRR*AQQAHLEQRHQECPEESPCQDCPQEE 270
Query: 319 R*GGCQGGTLL 351
R GG GG +L
Sbjct: 271 RRGGR*GGAVL 303
Score = 100 bits (214), Expect = 5e-021
Identities = 50/130 (38%), Positives = 73/130 (56%)
Frame = -3 / -3
Query: 487 RFCCCKYKLGTL*RCGERDSLIGFVNDLGPQPFQALGRDLRDGDKGVEFLLGILLIVPLA 308
++ +Y L + * + + L+ +++LG Q F+ D + + V+ LL +LL+VPLA
Sbjct: 439 QYALSRYVLSSN*LKQQTEGLVLILHNLGTQTFKTFLGDFSNCHQRVQLLLSVLLVVPLA 260
Query: 307 GDPHTNPPRHXXXXXXXDVLVELHIDPDVRGAHGLLCKLPDLLDGVGXXXXXXXXXXXXX 128
G+P T+ PR DVLVEL++D D+ +HGLL KLPDLLDG+
Sbjct: 259 GNPDTDSPRDTPDAAAPDVLVELNVDADIICSHGLLGKLPDLLDGIWCLLLEGTSVEALV 80
Query: 127 XVDGVLPGDH 98
VDGVL G H
Sbjct: 79 EVDGVLAGHH 50
Score = 26.3 bits (51), Expect(3) = 6e-027
Identities = 9/12 (75%), Positives = 10/12 (83%)
Frame = -2 / -2
Query: 329 PPHRSSCGRSSH 294
PP RSSCG+S H
Sbjct: 281 PPRRSSCGQS*H 246
Score = 24.4 bits (47), Expect(3) = 6e-027
Identities = 10/13 (76%), Positives = 11/13 (84%)
Frame = -1 / -1
Query: 387 KPSAGISATVTRE 349
+PS G SATVTRE
Sbjct: 339 RPSWGTSATVTRE 301
>gb|BJ452851.1|BJ452851 BJ452851 K. Sato unpublished cDNA library, cv. Akashinriki
vegetative stage leaves Hordeum vulgare subsp. vulgare
cDNA clone baak40k22 5', mRNA sequence
Length = 587
Score = 215 bits (464), Expect = 2e-055
Identities = 93/130 (71%), Positives = 102/130 (78%)
Frame = +2 / +1
Query: 86 RKEEVVTREYTINLHKRLHGCTFKKKAPNAIKEIRKFAQKAMGTTDVRIDVKLNKHIWSS 265
RK+EVVTREYT+NLHKRLHGCTFKKKAPNAIKEIRKFAQKAMGT DVRIDVKLNKHIWSS
Sbjct: 112 RKDEVVTREYTVNLHKRLHGCTFKKKAPNAIKEIRKFAQKAMGTNDVRIDVKLNKHIWSS 291
Query: 266 GIXXXXXXXXXXXXXXXNDEEDAKEELYSLVTVAEIPAEGLKGLGTKVVDETD*AVAFST 445
GI NDEEDAKEELYSLVTVAE+P EGLKGLGTKVV++ D* +
Sbjct: 292 GIRSVPRRVRVRIARKRNDEEDAKEELYSLVTVAEVPQEGLKGLGTKVVEDED*TLCLLF 471
Query: 446 SLESS*FVFA 475
+*++ A
Sbjct: 472 QSVRT*YISA 501
Score = 107 bits (228), Expect(3) = 6e-027
Identities = 46/56 (82%), Positives = 47/56 (83%)
Frame = -1 / -1
Query: 258 QMCLLSFTSILTSVVPMAFCANFLISLMALGAFFLNVQPWRRLWRLMVYSLVTTSS 91
QMCLLS TS+ TS VPMAF ANFLISLMA GAFFL V PWRRLWRL VYS VTTSS
Sbjct: 284 QMCLLSLTSMRTSFVPMAFWANFLISLMAFGAFFLKVHPWRRLWRLTVYSRVTTSS 117
Score = 101 bits (215), Expect = 4e-021
Identities = 44/71 (61%), Positives = 51/71 (71%)
Frame = +1 / +3
Query: 139 PRLHIQEEGTQRHQGDQEVCTEGHGHHGRQDRCEAQQAHLEQRDQERAAEGSCEDRPQEE 318
PR+++QEEGT+ HQGDQEVC EGHG+ R AQQAHLEQR QE E C+D PQEE
Sbjct: 165 PRMYLQEEGTKCHQGDQEVCPEGHGNK*CPHRR*AQQAHLEQRHQECPEESPCQDCPQEE 344
Query: 319 R*GGCQGGTLL 351
R GG GG +L
Sbjct: 345 RRGGR*GGAVL 377
Score = 100 bits (212), Expect = 1e-020
Identities = 50/125 (40%), Positives = 71/125 (56%)
Frame = -3 / -3
Query: 472 KYKLGTL*RCGERDSLIGFVNDLGPQPFQALGRDLRDGDKGVEFLLGILLIVPLAGDPHT 293
+Y L + * + + L+ +++LG Q F+ D + + V+ LL +LL+VPLAG+P T
Sbjct: 498 RYVLSSN*LKQQTEGLVLILHNLGTQTFKTFLGDFSNCHQRVQLLLSVLLVVPLAGNPDT 319
Query: 292 NPPRHXXXXXXXDVLVELHIDPDVRGAHGLLCKLPDLLDGVGXXXXXXXXXXXXXXVDGV 113
+ PR DVLVEL++D D+ +HGLL KLPDLLDG+ VDGV
Sbjct: 318 DSPRDTPDAAAPDVLVELNVDADIICSHGLLGKLPDLLDGIWCLLLEGTSVEALVEVDGV 139
Query: 112 LPGDH 98
L G H
Sbjct: 138 LAGHH 124
Score = 26.3 bits (51), Expect(3) = 6e-027
Identities = 9/12 (75%), Positives = 10/12 (83%)
Frame = -2 / -2
Query: 329 PPHRSSCGRSSH 294
PP RSSCG+S H
Sbjct: 355 PPRRSSCGQS*H 320
Score = 24.4 bits (47), Expect(3) = 6e-027
Identities = 10/13 (76%), Positives = 11/13 (84%)
Frame = -1 / -1
Query: 387 KPSAGISATVTRE 349
+PS G SATVTRE
Sbjct: 413 RPSWGTSATVTRE 375
>gb|BJ455186.1|BJ455186 BJ455186 K. Sato unpublished cDNA library, cv. Akashinriki
vegetative stage leaves Hordeum vulgare subsp. vulgare
cDNA clone baak35j11 3', mRNA sequence
Length = 582
Score = 215 bits (464), Expect = 2e-055
Identities = 93/130 (71%), Positives = 102/130 (78%)
Frame = +2 / -2
Query: 86 RKEEVVTREYTINLHKRLHGCTFKKKAPNAIKEIRKFAQKAMGTTDVRIDVKLNKHIWSS 265
RK+EVVTREYT+NLHKRLHGCTFKKKAPNAIKEIRKFAQKAMGT DVRIDVKLNKHIWSS
Sbjct: 497 RKDEVVTREYTVNLHKRLHGCTFKKKAPNAIKEIRKFAQKAMGTNDVRIDVKLNKHIWSS 318
Query: 266 GIXXXXXXXXXXXXXXXNDEEDAKEELYSLVTVAEIPAEGLKGLGTKVVDETD*AVAFST 445
GI NDEEDAKEELYSLVTVAE+P EGLKGLGTKVV++ D* +
Sbjct: 317 GIRSVPRRVRVRIARKRNDEEDAKEELYSLVTVAEVPQEGLKGLGTKVVEDED*TLCLLF 138
Query: 446 SLESS*FVFA 475
+*++ A
Sbjct: 137 QSVRT*YISA 108
Score = 107 bits (228), Expect(3) = 6e-027
Identities = 46/56 (82%), Positives = 47/56 (83%)
Frame = -1 / +1
Query: 258 QMCLLSFTSILTSVVPMAFCANFLISLMALGAFFLNVQPWRRLWRLMVYSLVTTSS 91
QMCLLS TS+ TS VPMAF ANFLISLMA GAFFL V PWRRLWRL VYS VTTSS
Sbjct: 325 QMCLLSLTSMRTSFVPMAFWANFLISLMAFGAFFLKVHPWRRLWRLTVYSRVTTSS 492
Score = 101 bits (215), Expect = 4e-021
Identities = 44/71 (61%), Positives = 51/71 (71%)
Frame = +1 / -1
Query: 139 PRLHIQEEGTQRHQGDQEVCTEGHGHHGRQDRCEAQQAHLEQRDQERAAEGSCEDRPQEE 318
PR+++QEEGT+ HQGDQEVC EGHG+ R AQQAHLEQR QE E C+D PQEE
Sbjct: 444 PRMYLQEEGTKCHQGDQEVCPEGHGNK*CPHRR*AQQAHLEQRHQECPEESPCQDCPQEE 265
Query: 319 R*GGCQGGTLL 351
R GG GG +L
Sbjct: 264 RRGGR*GGAVL 232
Score = 100 bits (212), Expect = 1e-020
Identities = 50/125 (40%), Positives = 71/125 (56%)
Frame = -3 / +3
Query: 472 KYKLGTL*RCGERDSLIGFVNDLGPQPFQALGRDLRDGDKGVEFLLGILLIVPLAGDPHT 293
+Y L + * + + L+ +++LG Q F+ D + + V+ LL +LL+VPLAG+P T
Sbjct: 111 RYVLSSN*LKQQTEGLVLILHNLGTQTFKTFLGDFSNCHQRVQLLLSVLLVVPLAGNPDT 290
Query: 292 NPPRHXXXXXXXDVLVELHIDPDVRGAHGLLCKLPDLLDGVGXXXXXXXXXXXXXXVDGV 113
+ PR DVLVEL++D D+ +HGLL KLPDLLDG+ VDGV
Sbjct: 291 DSPRDTPDAAAPDVLVELNVDADIICSHGLLGKLPDLLDGIWCLLLEGTSVEALVEVDGV 470
Query: 112 LPGDH 98
L G H
Sbjct: 471 LAGHH 485
Score = 26.3 bits (51), Expect(3) = 6e-027
Identities = 9/12 (75%), Positives = 10/12 (83%)
Frame = -2 / +2
Query: 329 PPHRSSCGRSSH 294
PP RSSCG+S H
Sbjct: 254 PPRRSSCGQS*H 289
Score = 24.4 bits (47), Expect(3) = 6e-027
Identities = 10/13 (76%), Positives = 11/13 (84%)
Frame = -1 / +1
Query: 387 KPSAGISATVTRE 349
+PS G SATVTRE
Sbjct: 196 RPSWGTSATVTRE 234
Database: Hordeum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:16 PM
Number of letters in database: 175,134,539
Number of sequences in database: 312,970
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 278,553,998
Number of Sequences: 312970
Number of extensions: 4112423
Number of successful extensions: 64033
Number of sequences better than 1.0e-020: 259
length of database: 58,378,179
effective HSP length: 51
effective length of database: 42,416,709
effective search space used: 6404923059
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)