TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 1716233.2.1
(1153 letters)
Database: Hordeum_nucl_with_EST.fasta
312,970 sequences; 175,134,539 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BM444264.1|BM444264 EBem09_SQ004_K07_R embryo, 1 Day ger... 429 e-119
gb|BU990124.1|BU990124 HF24C15r HF Hordeum vulgare subsp. v... 429 e-119
gb|BU990653.1|BU990653 HF25K21r HF Hordeum vulgare subsp. v... 370 e-114
gb|BQ465058.1|BQ465058 HU02I12r HU Hordeum vulgare subsp. v... 363 1e-099
gb|CB859369.1|CB859369 HI10E02w HI Hordeum vulgare subsp. v... 325 1e-090
gb|BU972271.1|BU972271 HB21C19r BC Hordeum vulgare subsp. v... 330 6e-090
gb|BF265822.1|BF265822 HV_CEa0013G21f Hordeum vulgare seedl... 294 5e-088
gb|BQ663500.1|BQ663500 HU02O17u HU Hordeum vulgare subsp. v... 316 5e-088
gb|BQ662921.1|BQ662921 HS04M10u HS Hordeum vulgare subsp. v... 311 2e-086
gb|AV917174.1|AV917174 AV917174 K. Sato unpublished cDNA li... 311 4e-084
gb|CV062418.1|CV062418 BNEL79g9 Barley EST endosperm librar... 307 1e-082
gb|BQ470277.1|BQ470277 HX02G12r HX Hordeum vulgare subsp. v... 256 2e-080
gb|BQ465196.1|BQ465196 HU02O17r HU Hordeum vulgare subsp. v... 256 2e-080
gb|CA014815.1|CA014815 HT12G23r HT Hordeum vulgare subsp. v... 290 1e-077
gb|CA007157.1|CA007157 HU06P10r HU Hordeum vulgare subsp. v... 222 2e-070
gb|AV927744.1|AV927744 AV927744 K. Sato unpublished cDNA li... 187 3e-070
gb|CA032718.1|CA032718 HX14A06r HX Hordeum vulgare subsp. v... 218 3e-069
gb|BM816745.1|BM816745 HB02D10_T3.ab1 HB Hordeum vulgare su... 213 6e-069
gb|BQ465233.1|BQ465233 HU03A07r HU Hordeum vulgare subsp. v... 260 7e-069
gb|BQ467754.1|BQ467754 HS04M10r HS Hordeum vulgare subsp. v... 215 4e-068
gb|BU989668.1|BU989668 HF22F24r HF Hordeum vulgare subsp. v... 213 7e-066
gb|BU998184.1|BU998184 HI10E02r HI Hordeum vulgare subsp. v... 202 2e-064
gb|CV054303.1|CV054303 BNEL109a5 Barley EST endosperm libra... 240 1e-062
gb|BE194657.3|BE194657 HVSMEh0086G10f Hordeum vulgare 5-45 ... 182 4e-059
gb|BG415776.2|BG415776 HVSMEk0007M10f Hordeum vulgare testa... 205 8e-059
gb|BF265820.1|BF265820 HV_CEa0013G19f Hordeum vulgare seedl... 124 3e-057
gb|AW982908.2|AW982908 HVSMEg0004I13f Hordeum vulgare pre-a... 193 3e-055
gb|CA009861.1|CA009861 HT12G23u HT Hordeum vulgare subsp. v... 210 2e-053
gb|CA002012.1|CA002012 HS06E04r HS Hordeum vulgare subsp. v... 187 2e-053
gb|BQ466667.1|BQ466667 HS01D11T HS Hordeum vulgare subsp. v... 197 9e-050
gb|BQ466990.1|BQ466990 HS02D11r HS Hordeum vulgare subsp. v... 197 9e-050
gb|BQ662231.1|BQ662231 HS01D11w HS Hordeum vulgare subsp. v... 197 9e-050
gb|BQ464988.1|BQ464988 HU02F10r HU Hordeum vulgare subsp. v... 195 3e-049
gb|BQ662841.1|BQ662841 HS04G18u HS Hordeum vulgare subsp. v... 184 1e-048
gb|BF617114.2|BF617114 HVSMEc0014K08f Hordeum vulgare seedl... 120 9e-047
gb|BM377223.2|BM377223 EBem05_SQ004_H19_R embryo, 14 DPA, n... 116 3e-046
gb|CA021658.1|CA021658 HZ40K23r HZ Hordeum vulgare subsp. v... 146 2e-041
gb|BF624483.3|BF624483 HVSMEa0016L04f Hordeum vulgare seedl... 113 7e-032
gb|BG300415.1|BG300415 HVSMEb0016P04f Hordeum vulgare seedl... 131 6e-030
gb|BF629961.2|BF629961 HVSMEb0007H14f Hordeum vulgare seedl... 100 1e-027
gb|CA026092.1|CA026092 HZ54G07r HZ Hordeum vulgare subsp. v... 108 1e-026
gb|BG414493.2|BG414493 HVSMEk0002K22f Hordeum vulgare testa... 76 6e-026
gb|BQ658439.1|BQ658439 HB09C11w BC Hordeum vulgare subsp. v... 107 1e-025
gb|BM101420.1|BM101420 EBpi01_SQ003_M19_R pistil, 1 DPA, no... 107 1e-025
gb|BI950575.1|BI950575 HVSMEl0021H10f Hordeum vulgare spike... 106 2e-024
gb|AV931983.1|AV931983 AV931983 K. Sato unpublished cDNA li... 84 7e-023
gb|AV923038.1|AV923038 AV923038 K. Sato unpublished cDNA li... 84 7e-023
>gb|BM444264.1|BM444264 EBem09_SQ004_K07_R embryo, 1 Day germination, no treatment, cv
Optic, EBem09 Hordeum vulgare subsp. vulgare cDNA clone
EBem09_SQ004_K07 5', mRNA sequence
Length = 574
Score = 429 bits (931), Expect = e-119
Identities = 163/187 (87%), Positives = 176/187 (94%)
Frame = -2 / +2
Query: 822 WISWFCTLRGNEFFCEIDDDYIQDDFNLCGLSNQVPYYDYALDLILDIESSNDDGFTEEQ 643
WISWFC+LRGNEFFCE+DDDYIQDDFNLCGLS QVPYY+YALDLILD+ESS+ D FTEEQ
Sbjct: 2 WISWFCSLRGNEFFCEVDDDYIQDDFNLCGLSGQVPYYEYALDLILDVESSHGDMFTEEQ 181
Query: 642 NELIESSAEMLYGLIHARYILTSKGLAAMLEKFKNYDFGRCPRVYCCGQPCLPAGQSDVP 463
NELIES+AEMLYGLIH RYILTSKGLAAML+K+KNYDFGRCPRV+C GQPCLP GQSD+P
Sbjct: 182 NELIESAAEMLYGLIHVRYILTSKGLAAMLDKYKNYDFGRCPRVHCSGQPCLPVGQSDIP 361
Query: 462 RSSTVKIYCPKCEELNYPRSKYQGNIDGSYFGTTFPHLFLMTYSHLKPQKPSQQYTPRVF 283
RSS VKIYCPKCE+L YPRSKYQ NIDG+YFGTTFPHLFLMTY HLKPQKPSQQY P+VF
Sbjct: 362 RSSNVKIYCPKCEDLYYPRSKYQSNIDGAYFGTTFPHLFLMTYPHLKPQKPSQQYVPKVF 541
Query: 282 GFKLHKP 262
GFKLHKP
Sbjct: 542 GFKLHKP 562
Score = 274 bits (592), Expect = 8e-073
Identities = 126/186 (67%), Positives = 133/186 (71%)
Frame = +2 / -2
Query: 263 GL*SLKPKTLGVYCCDGFCGFKCE*VIRKR*GNVVPKYDPSMLPWYLDLG*LSSSHFGQY 442
GL*SLKPKTLG YCCDGF GFKC *VIR +*GNVVPKY PSML YLDLG* SSHFGQ
Sbjct: 561 GL*SLKPKTLGTYCCDGFWGFKCG*VIRNK*GNVVPKYAPSMLL*YLDLG**RSSHFGQ* 382
Query: 443 IFTVLDLGTSDCPAGRQGWPQQYTLGHLPKS*FLNFSNIAARPLLVKMYRA*IKPYSISA 622
IFT+L+ G SD P GR GWP Q TLGHLPKS*FL SNIAA PLLV++YR *I P SISA
Sbjct: 381 IFTLLERGMSDWPTGRHGWPLQCTLGHLPKS*FLYLSNIAANPLLVRIYRT*INP*SISA 202
Query: 623 DDSINSFCSSVNPSSLEDXXXXXXXXXXXXYGT*LLRPHRLKXXXXXXXXXXQKNSLPRN 802
DSI+SFCSSVN S ED YGT* L P RLK QKNSLPR
Sbjct: 201 ADSISSFCSSVNISPCEDSTSNIRSRAYS*YGT*PLSPQRLKSSCM*SSSTSQKNSLPRK 22
Query: 803 VQNHEI 820
+QNHEI
Sbjct: 21 LQNHEI 4
Score = 142 bits (304), Expect = 4e-033
Identities = 79/188 (42%), Positives = 118/188 (62%)
Frame = -1 / +1
Query: 823 LDFMVLYIARQ*ILL*DR**LYTG*F*PVWSE*SGAIL*LCT*SHLRH*VF***RVYRGA 644
+DFMVL +A Q*+LL* * L+T F +W++ S +IL*+C+* ++ VF * V+R A
Sbjct: 1 VDFMVL*LAGQ*VLL*S**RLHTRRFQSLWAKRSSSIL*ICS*PYIGCRVFTW*YVHRRA 180
Query: 643 K*INRVICRDAVRFNSCTIHFNQQGSSCNVGEVQELRLW*MPQGVLLWPALPSSRAIRCS 464
+* + CRDA+ +SC+I+ N+ CNVG +QEL LW M + L P +PSS + S
Sbjct: 181 E*TY*ISCRDALWIDSCSIYSNK*RVGCNVG*IQEL*LWQMSKSAL*RPTMPSSWPVGHS 360
Query: 463 *IEHCEDILSEMRRT*LSKIQVPRQHRWIILWDDIPSSFPDDXXXXXXXXAVTAIHSKGF 284
CE++L ++ R+ LS+IQ+ +QH +LWD++ S DD VTA+ ++GF
Sbjct: 361 SF**CENLLPKV*RSLLSEIQISKQH*RGVLWDNVSSLVSDDLPTFEAPETVTAVRTQGF 540
Query: 283 RLQTSQAV 260
LQTS A+
Sbjct: 541 WLQTS*AI 564
Score = 92.7 bits (196), Expect(2) = 1e-023
Identities = 53/113 (46%), Positives = 61/113 (53%)
Frame = +3 / -3
Query: 483 LEGRAGHSSTPWGIYQSRSS*TSPTLQLDPCWLKCIVHELNRTASLQMTRLIHFAPR*TR 662
LEG G S I QS SS PTLQ L+ I HE ASLQ+ + +H A *T
Sbjct: 341 LEGMVGRYSALLDICQSHSSCIYPTLQPTLYLLEYIEHESIHKASLQLIQ*VHSALL*TY 162
Query: 663 HH*KTQCLR*DQVHNHNMAPDYSDHTG*NHPVYSHHRSHKRIHCLAMYRTMKS 821
HH KT+ * Q H HNM D H *N V + H+ H+R HC A YRTMKS
Sbjct: 161 HHVKTRHPI*GQEHIHNMELDRLAHRD*NRLVCNRHQLHRRTHCPASYRTMKS 3
Score = 92.7 bits (196), Expect(2) = 2e-031
Identities = 41/92 (44%), Positives = 58/92 (63%)
Frame = +1 / -1
Query: 340 HQEKMRECRPKV*SIDVALVLGSWIVKFFAFRTIYLHSARSRNI*LPCWKAGLATAVHPG 519
HQ+++R+ PKV ++VAL+ GS IV+ F + H R+RN+ L WKA LA VH
Sbjct: 484 HQKQVRKRCPKVRPVNVALIFGSRIVEIFTLWAVNFHITRTRNVRLANWKAWLAATVHSW 305
Query: 520 ASTKVVVLELLQHCS*TLAG*NVSCMN*TVQH 615
S KV+VL +QHCS *N+S MN +++H
Sbjct: 304 TSAKVIVLVFIQHCSQPFTC*NISNMNQSIKH 209
Score = 91.3 bits (193), Expect(3) = 4e-024
Identities = 43/99 (43%), Positives = 60/99 (60%)
Frame = -3 / +3
Query: 650 RSKMN*SSHLQRCCTV*FMHDTF*PARV*LQCWRSSRTTTLVDAPGCTAVASPAFQQGNQ 471
+S+MN + LQRC *FM D F* + LQCW ++RT TL D CT A+ AFQ ++
Sbjct: 174 KSRMNLLNQLQRCFMD*FMFDIF*QVKGWLQCWINTRTMTLADVQECTVAANHAFQLASR 353
Query: 470 MFLDRAL*RYIVRNAKNLTIQDPSTKATSMDHTLGRHSL 354
FL +*++ ++ K TI+DP+ KAT TLG+ L
Sbjct: 354 TFLVLVM*KFTAQSVKISTIRDPNIKATLTGRTLGQRFL 470
Score = 63.8 bits (133), Expect(2) = 2e-031
Identities = 24/50 (48%), Positives = 38/50 (76%)
Frame = +1 / -1
Query: 673 RLNV*DEIKCIIIIWHLITQTTQVKIILYIVIIDLTKEFIASQCTEP*NP 822
RL++ ++K I IIW+L T+++I+LY+++I+ T+E IA Q TEP*NP
Sbjct: 151 RLDIQYKVKSIFIIWNLTA*PTEIEIVLYVIVINFTEELIAPQATEP*NP 2
Score = 37.3 bits (75), Expect(2) = 1e-023
Identities = 20/54 (37%), Positives = 24/54 (44%)
Frame = +3 / -3
Query: 255 VMTACEV*SRKPLECIAVTXXXXXXXXXXXGKDEGMSSQSMIHRCCLGTWILDS 416
++ A EV*S+KP AVT E SQS +CC WI DS
Sbjct: 569 LVMAYEV*SQKPWVRTAVTVSGASNVGRSSETSEETLSQSTPRQCCFDIWISDS 408
Score = 35.9 bits (72), Expect(3) = 4e-024
Identities = 16/34 (47%), Positives = 21/34 (61%)
Frame = -3 / +3
Query: 821 GFHGSVHCEAMNSFVRSMMTIYRMILTCVV*VIR 720
GFHGSV C AM+S V+ M Y+ I V * ++
Sbjct: 3 GFHGSVACGAMSSSVKLMTITYKTISISVG*AVK 104
Score = 22.1 bits (42), Expect(3) = 4e-024
Identities = 9/17 (52%), Positives = 11/17 (64%)
Frame = -3 / +3
Query: 308 HSNTLQGFSASNFTSRH 258
HS+T F ASNF S +
Sbjct: 516 HSSTYPRFLASNFISHN 566
>gb|BU990124.1|BU990124 HF24C15r HF Hordeum vulgare subsp. vulgare cDNA clone HF24C15
5-PRIME, mRNA sequence
Length = 700
Score = 429 bits (931), Expect = e-119
Identities = 163/187 (87%), Positives = 176/187 (94%)
Frame = -2 / +1
Query: 822 WISWFCTLRGNEFFCEIDDDYIQDDFNLCGLSNQVPYYDYALDLILDIESSNDDGFTEEQ 643
WISWFC+LRGNEFFCE+DDDYIQDDFNLCGLS QVPYY+YALDLILD+ESS+ D FTEEQ
Sbjct: 79 WISWFCSLRGNEFFCEVDDDYIQDDFNLCGLSGQVPYYEYALDLILDVESSHGDMFTEEQ 258
Query: 642 NELIESSAEMLYGLIHARYILTSKGLAAMLEKFKNYDFGRCPRVYCCGQPCLPAGQSDVP 463
NELIES+AEMLYGLIH RYILTSKGLAAML+K+KNYDFGRCPRV+C GQPCLP GQSD+P
Sbjct: 259 NELIESAAEMLYGLIHVRYILTSKGLAAMLDKYKNYDFGRCPRVHCSGQPCLPVGQSDIP 438
Query: 462 RSSTVKIYCPKCEELNYPRSKYQGNIDGSYFGTTFPHLFLMTYSHLKPQKPSQQYTPRVF 283
RSS VKIYCPKCE+L YPRSKYQ NIDG+YFGTTFPHLFLMTY HLKPQKPSQQY P+VF
Sbjct: 439 RSSNVKIYCPKCEDLYYPRSKYQSNIDGAYFGTTFPHLFLMTYPHLKPQKPSQQYVPKVF 618
Query: 282 GFKLHKP 262
GFKLHKP
Sbjct: 619 GFKLHKP 639
Score = 276 bits (598), Expect = 1e-073
Identities = 127/188 (67%), Positives = 134/188 (71%)
Frame = +2 / -3
Query: 263 GL*SLKPKTLGVYCCDGFCGFKCE*VIRKR*GNVVPKYDPSMLPWYLDLG*LSSSHFGQY 442
GL*SLKPKTLG YCCDGF GFKC *VIR +*GNVVPKY PSML YLDLG* SSHFGQ
Sbjct: 638 GL*SLKPKTLGTYCCDGFWGFKCG*VIRNK*GNVVPKYAPSMLL*YLDLG**RSSHFGQ* 459
Query: 443 IFTVLDLGTSDCPAGRQGWPQQYTLGHLPKS*FLNFSNIAARPLLVKMYRA*IKPYSISA 622
IFT+L+ G SD P GR GWP Q TLGHLPKS*FL SNIAA PLLV++YR *I P SISA
Sbjct: 458 IFTLLERGMSDWPTGRHGWPLQCTLGHLPKS*FLYLSNIAANPLLVRIYRT*INP*SISA 279
Query: 623 DDSINSFCSSVNPSSLEDXXXXXXXXXXXXYGT*LLRPHRLKXXXXXXXXXXQKNSLPRN 802
DSI+SFCSSVN S ED YGT* L P RLK QKNSLPR
Sbjct: 278 ADSISSFCSSVNISPCEDSTSNIRSRAYS*YGT*PLSPQRLKSSCM*SSSTSQKNSLPRK 99
Query: 803 VQNHEIQD 826
+QNHEI D
Sbjct: 98 LQNHEIHD 75
Score = 155 bits (334), Expect = 3e-037
Identities = 87/205 (42%), Positives = 129/205 (62%)
Frame = -1 / +3
Query: 874 N*Q*RF*CEWFRGRGHVLDFMVLYIARQ*ILL*DR**LYTG*F*PVWSE*SGAIL*LCT* 695
+*Q*R EWF R +++DFMVL +A Q*+LL* * L+T F +W++ S +IL*+C+*
Sbjct: 27 H*Q*RIRPEWF*WRRYIVDFMVL*LAGQ*VLL*S**RLHTRRFQSLWAKRSSSIL*ICS* 206
Query: 694 SHLRH*VF***RVYRGAK*INRVICRDAVRFNSCTIHFNQQGSSCNVGEVQELRLW*MPQ 515
++ VF * V+R A+* + CRDA+ +SC+I+ N+ CNVG +QEL LW M +
Sbjct: 207 PYIGCRVFTW*YVHRRAE*TY*ISCRDALWIDSCSIYSNK*RVGCNVG*IQEL*LWQMSK 386
Query: 514 GVLLWPALPSSRAIRCS*IEHCEDILSEMRRT*LSKIQVPRQHRWIILWDDIPSSFPDDX 335
L P +PSS + S CE++L ++ R+ LS+IQ+ +QH +LWD++ S DD
Sbjct: 387 SAL*RPTMPSSWPVGHSSF**CENLLPKV*RSLLSEIQISKQH*RGVLWDNVSSLVSDDL 566
Query: 334 XXXXXXXAVTAIHSKGFRLQTSQAV 260
VTA+ ++GF LQTS A+
Sbjct: 567 PTFEAPETVTAVRTQGFWLQTS*AI 641
Score = 110 bits (235), Expect(2) = 7e-029
Identities = 63/135 (46%), Positives = 72/135 (53%)
Frame = +3 / -1
Query: 483 LEGRAGHSSTPWGIYQSRSS*TSPTLQLDPCWLKCIVHELNRTASLQMTRLIHFAPR*TR 662
LEG G S I QS SS PTLQ L+ I HE ASLQ+ + +H A *T
Sbjct: 418 LEGMVGRYSALLDICQSHSSCIYPTLQPTLYLLEYIEHESIHKASLQLIQ*VHSALL*TY 239
Query: 663 HH*KTQCLR*DQVHNHNMAPDYSDHTG*NHPVYSHHRSHKRIHCLAMYRTMKSRTCPLPR 842
HH KT+ * Q H HNM D H *N V + H+ H+R HC A YRTMKS L +
Sbjct: 238 HHVKTRHPI*GQEHIHNMELDRLAHRD*NRLVCNRHQLHRRTHCPASYRTMKSTMYLLHQ 59
Query: 843 NHSHQNLHCQFQIPH 887
NHS LHCQ I H
Sbjct: 58 NHSGLILHCQCPILH 14
Score = 92.7 bits (196), Expect(2) = 2e-036
Identities = 41/92 (44%), Positives = 58/92 (63%)
Frame = +1 / -2
Query: 340 HQEKMRECRPKV*SIDVALVLGSWIVKFFAFRTIYLHSARSRNI*LPCWKAGLATAVHPG 519
HQ+++R+ PKV ++VAL+ GS IV+ F + H R+RN+ L WKA LA VH
Sbjct: 561 HQKQVRKRCPKVRPVNVALIFGSRIVEIFTLWAVNFHITRTRNVRLANWKAWLAATVHSW 382
Query: 520 ASTKVVVLELLQHCS*TLAG*NVSCMN*TVQH 615
S KV+VL +QHCS *N+S MN +++H
Sbjct: 381 TSAKVIVLVFIQHCSQPFTC*NISNMNQSIKH 286
Score = 91.3 bits (193), Expect(3) = 2e-027
Identities = 43/99 (43%), Positives = 60/99 (60%)
Frame = -3 / +2
Query: 650 RSKMN*SSHLQRCCTV*FMHDTF*PARV*LQCWRSSRTTTLVDAPGCTAVASPAFQQGNQ 471
+S+MN + LQRC *FM D F* + LQCW ++RT TL D CT A+ AFQ ++
Sbjct: 251 KSRMNLLNQLQRCFMD*FMFDIF*QVKGWLQCWINTRTMTLADVQECTVAANHAFQLASR 430
Query: 470 MFLDRAL*RYIVRNAKNLTIQDPSTKATSMDHTLGRHSL 354
FL +*++ ++ K TI+DP+ KAT TLG+ L
Sbjct: 431 TFLVLVM*KFTAQSVKISTIRDPNIKATLTGRTLGQRFL 547
Score = 80.8 bits (170), Expect(2) = 2e-036
Identities = 32/70 (45%), Positives = 50/70 (71%)
Frame = +1 / -2
Query: 673 RLNV*DEIKCIIIIWHLITQTTQVKIILYIVIIDLTKEFIASQCTEP*NPGRVLSLGTTH 852
RL++ ++K I IIW+L T+++I+LY+++I+ T+E IA Q TEP*NP + S+ TT
Sbjct: 228 RLDIQYKVKSIFIIWNLTA*PTEIEIVLYVIVINFTEELIAPQATEP*NPRCIFSIRTTQ 49
Query: 853 IRIFTVSFKF 882
+ FTVS +F
Sbjct: 48 V*FFTVSVRF 19
Score = 47.3 bits (97), Expect(3) = 2e-027
Identities = 25/56 (44%), Positives = 32/56 (57%)
Frame = -3 / +2
Query: 887 VRNLKLTVKILM*VVPRERTRPGFHGSVHCEAMNSFVRSMMTIYRMILTCVV*VIR 720
+ N LTVK *VV E+ GFHGSV C AM+S V+ M Y+ I V * ++
Sbjct: 14 MENRTLTVKNQT*VVLMEKIHRGFHGSVACGAMSSSVKLMTITYKTISISVG*AVK 181
Score = 37.3 bits (75), Expect(2) = 7e-029
Identities = 20/54 (37%), Positives = 24/54 (44%)
Frame = +3 / -1
Query: 255 VMTACEV*SRKPLECIAVTXXXXXXXXXXXGKDEGMSSQSMIHRCCLGTWILDS 416
++ A EV*S+KP AVT E SQS +CC WI DS
Sbjct: 646 LVMAYEV*SQKPWVRTAVTVSGASNVGRSSETSEETLSQSTPRQCCFDIWISDS 485
Score = 22.1 bits (42), Expect(3) = 2e-027
Identities = 9/17 (52%), Positives = 11/17 (64%)
Frame = -3 / +2
Query: 308 HSNTLQGFSASNFTSRH 258
HS+T F ASNF S +
Sbjct: 593 HSSTYPRFLASNFISHN 643
>gb|BU990653.1|BU990653 HF25K21r HF Hordeum vulgare subsp. vulgare cDNA clone HF25K21
5-PRIME, mRNA sequence
Length = 674
Score = 370 bits (803), Expect(3) = e-114
Identities = 147/174 (84%), Positives = 154/174 (88%)
Frame = -2 / +2
Query: 900 EVSDGEEFXXXXXXXXXXXXXXXXXSWISWFCTLRGNEFFCEIDDDYIQDDFNLCGLSNQ 721
+VSD EEF SWISWFC+LRGNEFFCEIDDDYIQDDFNLCGLSNQ
Sbjct: 152 KVSDVEEFETDSEDSDVSGSEGEDTSWISWFCSLRGNEFFCEIDDDYIQDDFNLCGLSNQ 331
Query: 720 VPYYDYALDLILDIESSNDDGFTEEQNELIESSAEMLYGLIHARYILTSKGLAAMLEKFK 541
VPYYDYALDLILDIESSN D FTEEQNELIESSAEMLYGLIHARYILTSKGLAAMLEKFK
Sbjct: 332 VPYYDYALDLILDIESSNGDVFTEEQNELIESSAEMLYGLIHARYILTSKGLAAMLEKFK 511
Query: 540 NYDFGRCPRVYCCGQPCLPAGQSDVPRSSTVKIYCPKCEELNYPRSKYQGNIDG 379
NYDFGRCPRVYCCGQPCLPAGQSD+PRSSTVK++CPKCE+L+YPRSKYQGNIDG
Sbjct: 512 NYDFGRCPRVYCCGQPCLPAGQSDIPRSSTVKVFCPKCEDLHYPRSKYQGNIDG 673
Score = 279 bits (604), Expect(2) = 7e-085
Identities = 118/172 (68%), Positives = 132/172 (76%)
Frame = +3 / -1
Query: 378 IHRCCLGTWILDS*VLRISDNISSQCSI*EHLIALLEGRAGHSSTPWGIYQSRSS*TSPT 557
+H+CCLGTW LDS L I D S C *E LIALLE RAGHSS GI Q+ +S*T T
Sbjct: 674 LHQCCLGTWTLDSVSLHILDKTPSLCLT*ECLIALLEDRAGHSSILEGICQNHNS*TFLT 495
Query: 558 LQLDPCWLKCIVHELNRTASLQMTRLIHFAPR*TRHH*KTQCLR*DQVHNHNMAPDYSDH 737
LQLDPC L+C VH LN TASLQMT+LIHFAP+* HH*KTQCL *DQVHNHNMAPD H
Sbjct: 494 LQLDPC*LRCTVHGLNHTASLQMTQLIHFAPQ*IHHH*KTQCLG*DQVHNHNMAPDCLGH 315
Query: 738 TG*NHPVYSHHRSHKRIHCLAMYRTMKSRTCPLPRNHSHQNLHCQFQIPHHQ 893
*NHPVY+HH+SH+RI CLA YRTMKS+ CPL +N HQNLHCQF+IP +
Sbjct: 314 RD*NHPVYNHHQSHRRIRCLASYRTMKSKMCPLLQNR*HQNLHCQFRIPRRR 159
Score = 264 bits (572), Expect(2) = 8e-076
Identities = 115/149 (77%), Positives = 116/149 (77%)
Frame = +2 / -3
Query: 380 PSMLPWYLDLG*LSSSHFGQYIFTVLDLGTSDCPAGRQGWPQQYTLGHLPKS*FLNFSNI 559
PSMLPWYLDLG* SSHFGQ FTVLDLG SDCPAGRQGWPQQYT GHLPKS*FLNFSNI
Sbjct: 672 PSMLPWYLDLG*CKSSHFGQNTFTVLDLGMSDCPAGRQGWPQQYTRGHLPKS*FLNFSNI 493
Query: 560 AARPLLVKMYRA*IKPYSISADDSINSFCSSVNPSSLEDXXXXXXXXXXXXYGT*LLRPH 739
AARPLLVKMYRA IKPYSISADDSINSFCSSVN S LED YGT*LLRP
Sbjct: 492 AARPLLVKMYRAWIKPYSISADDSINSFCSSVNTSPLEDSMSRMRSSA*S*YGT*LLRPQ 313
Query: 740 RLKXXXXXXXXXXQKNSLPRNVQNHEIQD 826
RLK QKNSLPR +QNHEIQD
Sbjct: 312 RLKSSCI*SSSISQKNSLPRKLQNHEIQD 226
Score = 240 bits (518), Expect(2) = 3e-070
Identities = 117/165 (70%), Positives = 131/165 (79%)
Frame = -1 / +1
Query: 874 N*Q*RF*CEWFRGRGHVLDFMVLYIARQ*ILL*DR**LYTG*F*PVWSE*SGAIL*LCT* 695
N*Q*RF*C F RGH+LDFMVL +ARQ ILL*D **LYTG*F +W + SGAIL*LCT*
Sbjct: 178 N*Q*RF*C*RF*RRGHILDFMVL*LARQRILL*D***LYTG*FQSLWPKQSGAIL*LCT* 357
Query: 694 SHLRH*VF***RVYRGAK*INRVICRDAVRFNSCTIHFNQQGSSCNVGEVQELRLW*MPQ 515
SH RH*VF* * ++ GAK*IN VICRDAV FN CT+H N QGSSCNV +VQEL W MP
Sbjct: 358 SHPRH*VF*W*CIH*GAK*IN*VICRDAVWFNPCTVHLN*QGSSCNVRKVQEL*FWQMPS 537
Query: 514 GVLLWPALPSSRAIRCS*IEHCEDILSEMRRT*LSKIQVPRQHRW 380
+LLWPAL SSRAIR S*++H E +LS+M R LSK+QVPRQH W
Sbjct: 538 SILLWPALSSSRAIRHS*VKHSEGVLSKM*RLTLSKVQVPRQH*W 672
Score = 128 bits (275), Expect(3) = 3e-062
Identities = 55/77 (71%), Positives = 66/77 (85%)
Frame = +1 / -2
Query: 661 VIIRRLNV*DEIKCIIIIWHLITQTTQVKIILYIVIIDLTKEFIASQCTEP*NPGRVLSL 840
+ IRRLNV*DEIKCIIIIWHLI T+++IILYI+II+LT+EF+ASQ TEP*NP VLS
Sbjct: 391 ITIRRLNV*DEIKCIIIIWHLIA*ATEIEIILYIIIINLTEEFVASQATEP*NPRCVLSF 212
Query: 841 GTTHIRIFTVSFKFLTI 891
T +IRIFTVSF+FL +
Sbjct: 211 RTANIRIFTVSFEFLDV 161
Score = 126 bits (269), Expect(2) = 7e-047
Identities = 62/91 (68%), Positives = 66/91 (72%)
Frame = -3 / +3
Query: 650 RSKMN*SSHLQRCCTV*FMHDTF*PARV*LQCWRSSRTTTLVDAPGCTAVASPAFQQGNQ 471
RSKMN* SHLQRCC V* MH T * ARV*LQC +SSR L DA TAVASP FQQGNQ
Sbjct: 402 RSKMN*LSHLQRCCMV*SMHGTS*LARV*LQC*KSSRIMILADALEYTAVASPVFQQGNQ 581
Query: 470 MFLDRAL*RYIVRNAKNLTIQDPSTKATSMD 378
FL +A *R V+N K TIQ PSTKAT M+
Sbjct: 582 TFLGQAQ*RCFVQNVKTYTIQGPSTKATLME 674
Score = 120 bits (256), Expect(3) = 3e-062
Identities = 52/79 (65%), Positives = 62/79 (78%)
Frame = +1 / -2
Query: 379 SIDVALVLGSWIVKFFAFRTIYLHSARSRNI*LPCWKAGLATAVHPGASTKVVVLELLQH 558
SI+VALVLG WIV F F T +LH A RN+*LPCWK GLATAV+ AS K+++LEL H
Sbjct: 673 SINVALVLGPWIV*VFTFWTKHLHCA*PRNV*LPCWKTGLATAVYSRASAKIIILELF*H 494
Query: 559 CS*TLAG*NVSCMN*TVQH 615
CS*TLA *+V CM+*T+QH
Sbjct: 493 CS*TLAS*DVPCMD*TIQH 437
Score = 82.2 bits (173), Expect(2) = 7e-047
Identities = 39/56 (69%), Positives = 40/56 (71%)
Frame = -3 / +3
Query: 884 RNLKLTVKILM*VVPRERTRPGFHGSVHCEAMNSFVRSMMTIYRMILTCVV*VIRC 717
RN KLTVKILM V +ERT GFHGSV CEA NS VR MM IYRMI V * IRC
Sbjct: 168 RNSKLTVKILMLAVLKERTHLGFHGSVACEATNSSVRLMMIIYRMISISVA*AIRC 335
Score = 55.6 bits (115), Expect(2) = 7e-085
Identities = 24/28 (85%), Positives = 24/28 (85%)
Frame = +2 / -3
Query: 965 PLEVDGDDLSRCFSSASLMRFRSIPAPP 1048
PLEVDGD LS CFSSASLMRFRSI A P
Sbjct: 87 PLEVDGDGLSVCFSSASLMRFRSISAAP 4
Score = 55.1 bits (114), Expect(3) = e-114
Identities = 23/28 (82%), Positives = 24/28 (85%)
Frame = -2 / +2
Query: 1047 GGAGMDRKRIKDALEKHLERSSPSTSRG 964
G A MDRKRIK+ALEKH ER SPSTSRG
Sbjct: 5 GAAEMDRKRIKEALEKHTERPSPSTSRG 88
Score = 46.0 bits (94), Expect(2) = 3e-070
Identities = 19/28 (67%), Positives = 21/28 (75%)
Frame = -1 / +1
Query: 1048 RRRRDGPEAHQGRAREAPGEVVAVYLQG 965
RRR DGPEAHQG A E G+ V V+LQG
Sbjct: 4 RRRGDGPEAHQGGAGETHGKAVPVHLQG 87
Score = 42.8 bits (87), Expect(2) = 8e-076
Identities = 18/29 (62%), Positives = 21/29 (72%)
Frame = +1 / -2
Query: 949 LLGHDAPGGRRRRPLQVLLERVLDALPVH 1035
LL PGG R RP +V L+R+LDALPVH
Sbjct: 103 LLPGRPPGGGRGRPFRVFLQRLLDALPVH 17
Score = 29.5 bits (58), Expect(3) = 3e-062
Identities = 13/16 (81%), Positives = 13/16 (81%)
Frame = +3 / -1
Query: 1002 SRARP*CASGPSLRRR 1049
S A P*CASGPS RRR
Sbjct: 50 SPAPP*CASGPSPRRR 3
Score = 28.1 bits (55), Expect(3) = e-114
Identities = 10/18 (55%), Positives = 15/18 (83%)
Frame = -2 / +2
Query: 957 SKERERLAAGKLPSSLGK 904
S+E+E LAAGK+ + +GK
Sbjct: 92 SREKEMLAAGKITTQIGK 145
>gb|BQ465058.1|BQ465058 HU02I12r HU Hordeum vulgare subsp. vulgare cDNA clone HU02I12
5-PRIME, mRNA sequence
Length = 659
Score = 363 bits (786), Expect = 1e-099
Identities = 137/175 (78%), Positives = 157/175 (89%)
Frame = -2 / +1
Query: 822 WISWFCTLRGNEFFCEIDDDYIQDDFNLCGLSNQVPYYDYALDLILDIESSNDDGFTEEQ 643
WI+WFC +RGNEFF E+DDDYIQDDFNLCGLS QVPYYD+ALDLILD+E +D F ++Q
Sbjct: 133 WINWFCAMRGNEFFAEVDDDYIQDDFNLCGLSAQVPYYDHALDLILDLEPVQEDVFADDQ 312
Query: 642 NELIESSAEMLYGLIHARYILTSKGLAAMLEKFKNYDFGRCPRVYCCGQPCLPAGQSDVP 463
NEL+ +SAEMLYGLIHARYILT+KGLAAMLEKFKN DFGRCPRV C GQPCLP GQSD+
Sbjct: 313 NELVVASAEMLYGLIHARYILTTKGLAAMLEKFKNCDFGRCPRVSCSGQPCLPMGQSDIA 492
Query: 462 RSSTVKIYCPKCEELNYPRSKYQGNIDGSYFGTTFPHLFLMTYSHLKPQKPSQQY 298
R+STVKIYCPKCE+L YPRSK+Q N DG+YFGTTFPH+F+MT+S LKPQKP+QQY
Sbjct: 493 RTSTVKIYCPKCEDLYYPRSKHQANTDGAYFGTTFPHMFMMTHSQLKPQKPAQQY 657
Score = 198 bits (427), Expect(2) = 5e-054
Identities = 87/123 (70%), Positives = 94/123 (76%)
Frame = +2 / -1
Query: 299 YCCDGFCGFKCE*VIRKR*GNVVPKYDPSMLPWYLDLG*LSSSHFGQYIFTVLDLGTSDC 478
YCC GFCGF CE VI *GNVVPKY PS+L W DLG* SSH GQYI TVL L SD
Sbjct: 656 YCCAGFCGFNCEWVIMNI*GNVVPKYAPSVLAWCFDLG**RSSHLGQYILTVLVLAISDW 477
Query: 479 PAGRQGWPQQYTLGHLPKS*FLNFSNIAARPLLVKMYRA*IKPYSISADDSINSFCSSVN 658
P GRQGWP+Q T GHLPKS FLNFS+IAA+PL+VKMYRA IKP SISAD + +SF SS N
Sbjct: 476 PIGRQGWPEQDTRGHLPKSQFLNFSSIAAKPLVVKMYRAWIKP*SISADATTSSFWSSAN 297
Query: 659 PSS 667
SS
Sbjct: 296 TSS 288
Score = 144 bits (310), Expect = 6e-034
Identities = 67/167 (40%), Positives = 100/167 (59%)
Frame = +1 / -3
Query: 340 HQEKMRECRPKV*SIDVALVLGSWIVKFFAFRTIYLHSARSRNI*LPCWKAGLATAVHPG 519
H E MR+ RPKV + + LVL SW+V+ FAFR IYL +I L WK GLA A + G
Sbjct: 615 HHEHMRKRRPKVCXVCIGLVLRSWVVEIFAFRAIYLDGTGPSDIGLAHWKTGLARAGYAG 436
Query: 520 ASTKVVVLELLQHCS*TLAG*NVSCMN*TVQHXXXXXXXXXXXXGKPVIIRRLNV*DEIK 699
A +KV VLELLQHC L+ +V ++ TV+H GK +++ RL V DEI+
Sbjct: 435 APSKVTVLELLQHCRQALSSQDVPGVDQTVKHLRGRDNQFILVIGKHILLDRLEVEDEIE 256
Query: 700 CIIIIWHLITQTTQVKIILYIVIIDLTKEFIASQCTEP*NPGRVLSL 840
++++ L + +V+++L +V++DL +E +A EP +P V+ L
Sbjct: 255 GVVVVGDLGAEAAEVEVVLDVVVVDLGEELVAPHGAEPVDPEGVVRL 115
Score = 33.6 bits (67), Expect(2) = 5e-054
Identities = 17/36 (47%), Positives = 17/36 (47%)
Frame = +2 / -1
Query: 716 GT*LLRPHRLKXXXXXXXXXXQKNSLPRNVQNHEIQ 823
GT LRP RLK KNSLP QN IQ
Sbjct: 239 GTWALRPQRLKSSWM*SSSTSAKNSLPLMAQNQLIQ 132
>gb|CB859369.1|CB859369 HI10E02w HI Hordeum vulgare subsp. vulgare cDNA clone HI10E02
3-PRIME, mRNA sequence
Length = 616
Score = 325 bits (703), Expect(2) = 1e-090
Identities = 127/138 (92%), Positives = 133/138 (96%)
Frame = -2 / -1
Query: 663 DGFTEEQNELIESSAEMLYGLIHARYILTSKGLAAMLEKFKNYDFGRCPRVYCCGQPCLP 484
D FTEEQNELIESSAEMLYG IHARYILTSKGLAAMLEKFKNYDFGRCPRVYCCGQPCLP
Sbjct: 613 DVFTEEQNELIESSAEMLYGXIHARYILTSKGLAAMLEKFKNYDFGRCPRVYCCGQPCLP 434
Query: 483 AGQSDVPRSSTVKIYCPKCEELNYPRSKYQGNIDGSYFGTTFPHLFLMTYSHLKPQKPSQ 304
AGQSD+PRSSTVK++CPKCE+L+YPRSKYQGNIDG+YFGTTFPHLFLMTY HLKPQKPSQ
Sbjct: 433 AGQSDIPRSSTVKVFCPKCEDLHYPRSKYQGNIDGAYFGTTFPHLFLMTYPHLKPQKPSQ 254
Query: 303 QYTPRVFGFKLHKPS*QS 250
QY PRVFGFKLHK S*QS
Sbjct: 253 QYVPRVFGFKLHKQS*QS 200
Score = 293 bits (635), Expect(2) = 2e-083
Identities = 121/137 (88%), Positives = 123/137 (89%)
Frame = +2 / +3
Query: 254 CHDGL*SLKPKTLGVYCCDGFCGFKCE*VIRKR*GNVVPKYDPSMLPWYLDLG*LSSSHF 433
CHD L*SLKPKTLG YCCDGFCGF+C VI+KR*GNVVPKY PSMLPWYLDLG* SSHF
Sbjct: 204 CHDCL*SLKPKTLGTYCCDGFCGFRCGYVIKKR*GNVVPKYAPSMLPWYLDLG*CKSSHF 383
Query: 434 GQYIFTVLDLGTSDCPAGRQGWPQQYTLGHLPKS*FLNFSNIAARPLLVKMYRA*IKPYS 613
GQ FTVLDLG SDCPAGRQGWPQQYT GHLPKS*FLNFSNIAARPLLVKMYRA I PYS
Sbjct: 384 GQNTFTVLDLGMSDCPAGRQGWPQQYTRGHLPKS*FLNFSNIAARPLLVKMYRAWIXPYS 563
Query: 614 ISADDSINSFCSSVNPS 664
ISADDSINSFCSSVN S
Sbjct: 564 ISADDSINSFCSSVNTS 614
Score = 194 bits (418), Expect(2) = 3e-050
Identities = 86/135 (63%), Positives = 100/135 (74%)
Frame = -1 / -3
Query: 658 VYRGAK*INRVICRDAVRFNSCTIHFNQQGSSCNVGEVQELRLW*MPQGVLLWPALPSSR 479
++ GAK*IN VICRDAV N CT+H N QGSSCNV +VQEL W MP +LLWPAL SSR
Sbjct: 608 IH*GAK*IN*VICRDAVWXNPCTVHLN*QGSSCNVRKVQEL*FWQMPSSILLWPALSSSR 429
Query: 478 AIRCS*IEHCEDILSEMRRT*LSKIQVPRQHRWIILWDDIPSSFPDDXXXXXXXXAVTAI 299
AIR S*++H E +LS+M R LSK+QVPRQH W ILW D+PSS DD A+TAI
Sbjct: 428 AIRHS*VKHSEGVLSKM*RLTLSKVQVPRQH*WSILWYDVPSSLLDDISTPEATEAITAI 249
Query: 298 HSKGFRLQTSQAVMT 254
SKGF LQTSQA++T
Sbjct: 248 RSKGFWLQTSQAIVT 204
Score = 174 bits (375), Expect(2) = 5e-047
Identities = 83/137 (60%), Positives = 92/137 (67%)
Frame = +3 / +1
Query: 255 VMTACEV*SRKPLECIAVTXXXXXXXXXXXGKDEGMSSQSMIHRCCLGTWILDS*VLRIS 434
V ACEV*S+KPLE IAV +DEG S QSM+H+CCLGTW LDS L I
Sbjct: 205 VTIACEV*SQKPLERIAVMASVASGVDMSSRRDEGTSYQSMLHQCCLGTWTLDSVSLHIL 384
Query: 435 DNISSQCSI*EHLIALLEGRAGHSSTPWGIYQSRSS*TSPTLQLDPCWLKCIVHELNRTA 614
D S C *E LIALLE RAGHSS GI Q+ +S*T TLQLDPC L+C VH L TA
Sbjct: 385 DKTPSLCLT*ECLIALLEDRAGHSSILEGICQNHNS*TFLTLQLDPC*LRCTVHGLXHTA 564
Query: 615 SLQMTRLIHFAPR*TRH 665
SLQMT+LIHFAP+* H
Sbjct: 565 SLQMTQLIHFAPQ*IHH 615
Score = 171 bits (367), Expect = 9e-042
Identities = 86/135 (63%), Positives = 92/135 (68%)
Frame = -3 / -2
Query: 650 RSKMN*SSHLQRCCTV*FMHDTF*PARV*LQCWRSSRTTTLVDAPGCTAVASPAFQQGNQ 471
RSKMN* SHLQRCC V* MH T * ARV*LQC +SSR L DA TAVASP FQQGNQ
Sbjct: 600 RSKMN*LSHLQRCCMV*SMHGTS*LARV*LQC*KSSRIMILADALEYTAVASPVFQQGNQ 421
Query: 470 MFLDRAL*RYIVRNAKNLTIQDPSTKATSMDHTLGRHSLIFS**LXXXXXXXXRHSNTLQ 291
FL +A *R V+N K TIQ PSTKAT M+HTL R SLI S** HSNT Q
Sbjct: 420 TFLGQAQ*RCFVQNVKTYTIQGPSTKATLMEHTLVRRSLISS**HIHT*SHRSHHSNTFQ 241
Query: 290 GFSASNFTSRHDRVV 246
GF ASNFTS D ++
Sbjct: 240 GFLASNFTSNRDNLL 196
Score = 136 bits (291), Expect(3) = 1e-035
Identities = 60/92 (65%), Positives = 71/92 (77%)
Frame = +1 / +2
Query: 340 HQEKMRECRPKV*SIDVALVLGSWIVKFFAFRTIYLHSARSRNI*LPCWKAGLATAVHPG 519
HQE+MRE R KV SI+VALVLG WIV F F T +LH A RN+*LPCWK GLATAV+
Sbjct: 290 HQEEMRERRTKVCSINVALVLGPWIV*VFTFWTKHLHCA*PRNV*LPCWKTGLATAVYSR 469
Query: 520 ASTKVVVLELLQHCS*TLAG*NVSCMN*TVQH 615
AS K+++LEL HCS*TLA *+V CM+ T+QH
Sbjct: 470 ASAKIIILELF*HCS*TLAS*DVPCMDXTIQH 565
Score = 36.3 bits (73), Expect(2) = 2e-083
Identities = 13/26 (50%), Positives = 20/26 (76%)
Frame = +3 / +3
Query: 96 TVIISENRYNFTIVYSEAQAREFVHQ 173
T +I +NRYN + VYS+ +ARE+ +Q
Sbjct: 48 TAVIQQNRYNCSAVYSKIRAREYSNQ 125
Score = 34.1 bits (68), Expect(2) = 5e-047
Identities = 16/29 (55%), Positives = 19/29 (65%)
Frame = +1 / +1
Query: 106 YRKTDTISQ*FTARPRLANSYINNTTVFE 192
Y KTDTI+Q FTAR LA++ I FE
Sbjct: 58 YNKTDTIAQQFTARFELASTRIKRPQHFE 144
Score = 29.5 bits (58), Expect(2) = 1e-090
Identities = 12/23 (52%), Positives = 14/23 (60%)
Frame = -2 / -2
Query: 174 IDVRIREPGPRCKLL*NCICFPI 106
+D RE CKLL NCICF +
Sbjct: 126 LDSSTRELESCCKLLSNCICFVV 58
Score = 28.6 bits (56), Expect(3) = 1e-035
Identities = 11/15 (73%), Positives = 13/15 (86%)
Frame = +1 / +2
Query: 253 LS*RLVKFEAENPWS 297
LS LVKFEA+NPW+
Sbjct: 203 LSRLLVKFEAKNPWN 247
Score = 25.4 bits (49), Expect(2) = 3e-050
Identities = 14/29 (48%), Positives = 16/29 (55%)
Frame = -3 / -3
Query: 176 LLMYEFASLGLAVNYCEIVSVFRYYYCCV 90
LL+ AS LAVN IVSV Y C +
Sbjct: 128 LLIRVLASSNLAVNC*AIVSVLLYDCCVI 42
Score = 24.0 bits (46), Expect(3) = 1e-035
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = +2 / +2
Query: 95 NSNNIGKQIQFHNSLQRGPGSRIRTS 172
+S++ KQIQ +SLQ+ SR+ S
Sbjct: 47 HSSHTTKQIQLLSSLQQDSSSRVLES 124
>gb|BU972271.1|BU972271 HB21C19r BC Hordeum vulgare subsp. vulgare cDNA clone HB21C19
5-PRIME, mRNA sequence
Length = 526
Score = 330 bits (716), Expect = 6e-090
Identities = 126/146 (86%), Positives = 137/146 (93%)
Frame = -2 / +1
Query: 822 WISWFCTLRGNEFFCEIDDDYIQDDFNLCGLSNQVPYYDYALDLILDIESSNDDGFTEEQ 643
WISWFC+LRGNEFFCE+DDDYIQDDFNLCGLS QVPYY+YALDLILD+ESS+ D FTEEQ
Sbjct: 88 WISWFCSLRGNEFFCEVDDDYIQDDFNLCGLSGQVPYYEYALDLILDVESSHGDMFTEEQ 267
Query: 642 NELIESSAEMLYGLIHARYILTSKGLAAMLEKFKNYDFGRCPRVYCCGQPCLPAGQSDVP 463
NELIES+AEMLYGLIH RYILTSKGLAAML+K+KNYDFGRCPRV+C GQPCLP GQSD+P
Sbjct: 268 NELIESAAEMLYGLIHVRYILTSKGLAAMLDKYKNYDFGRCPRVHCSGQPCLPVGQSDIP 447
Query: 462 RSSTVKIYCPKCEELNYPRSKYQGNI 385
RSS VKIYCPKCE+L YPRSKYQ NI
Sbjct: 448 RSSNVKIYCPKCEDLYYPRSKYQSNI 525
Score = 193 bits (417), Expect = 1e-048
Identities = 92/147 (62%), Positives = 98/147 (66%)
Frame = +2 / -3
Query: 386 MLPWYLDLG*LSSSHFGQYIFTVLDLGTSDCPAGRQGWPQQYTLGHLPKS*FLNFSNIAA 565
ML YLDLG* SSHFGQ IFT+L+ G SD P GR GWP Q TLGHLPKS*FL SNIAA
Sbjct: 524 MLL*YLDLG**RSSHFGQ*IFTLLERGMSDWPTGRHGWPLQCTLGHLPKS*FLYLSNIAA 345
Query: 566 RPLLVKMYRA*IKPYSISADDSINSFCSSVNPSSLEDXXXXXXXXXXXXYGT*LLRPHRL 745
PLLV++YR *I P SISA DSI+SFCSSVN S ED YGT* L P RL
Sbjct: 344 NPLLVRIYRT*INP*SISAADSISSFCSSVNISPCEDSTSNIRSRAYS*YGT*PLSPQRL 165
Query: 746 KXXXXXXXXXXQKNSLPRNVQNHEIQD 826
K QKNSLPR +QNHEI D
Sbjct: 164 KSSCM*SSSTSQKNSLPRKLQNHEIHD 84
Score = 124 bits (266), Expect = 8e-028
Identities = 71/163 (43%), Positives = 106/163 (65%)
Frame = -1 / +3
Query: 874 N*Q*RF*CEWFRGRGHVLDFMVLYIARQ*ILL*DR**LYTG*F*PVWSE*SGAIL*LCT* 695
+*Q*R EWF R +++DFMVL +A Q*+LL* * L+T F +W++ S +IL*+C+*
Sbjct: 36 H*Q*RIRPEWF*WRRYIVDFMVL*LAGQ*VLL*S**RLHTRRFQSLWAKRSSSIL*ICS* 215
Query: 694 SHLRH*VF***RVYRGAK*INRVICRDAVRFNSCTIHFNQQGSSCNVGEVQELRLW*MPQ 515
++ VF * V+R A+* + CRDA+ +SC+I+ N+ CNVG +QEL LW M +
Sbjct: 216 PYIGCRVFTW*YVHRRAE*TY*ISCRDALWIDSCSIYSNK*RVGCNVG*IQEL*LWQMSK 395
Query: 514 GVLLWPALPSSRAIRCS*IEHCEDILSEMRRT*LSKIQVPRQH 386
L P +PSS + S CE++L ++ R+ LS+IQ+ +QH
Sbjct: 396 SAL*RPTMPSSWPVGHSSF**CENLLPKV*RSLLSEIQISKQH 524
Score = 111 bits (238), Expect = 5e-024
Identities = 64/140 (45%), Positives = 73/140 (52%)
Frame = +3 / -1
Query: 483 LEGRAGHSSTPWGIYQSRSS*TSPTLQLDPCWLKCIVHELNRTASLQMTRLIHFAPR*TR 662
LEG G S I QS SS PTLQ L+ I HE ASLQ+ + +H A *T
Sbjct: 427 LEGMVGRYSALLDICQSHSSCIYPTLQPTLYLLEYIEHESIHKASLQLIQ*VHSALL*TY 248
Query: 663 HH*KTQCLR*DQVHNHNMAPDYSDHTG*NHPVYSHHRSHKRIHCLAMYRTMKSRTCPLPR 842
HH KT+ * Q H HNM D H *N V + H+ H+R HC A YRTMKS L +
Sbjct: 247 HHVKTRHPI*GQEHIHNMELDRLAHRD*NRLVCNRHQLHRRTHCPASYRTMKSTMYLLHQ 68
Query: 843 NHSHQNLHCQFQIPHHQTPP 902
NHS LHCQ I H P
Sbjct: 67 NHSGLILHCQCPILHRTACP 8
Score = 84.9 bits (179), Expect(2) = 3e-024
Identities = 39/88 (44%), Positives = 55/88 (62%)
Frame = -3 / +2
Query: 650 RSKMN*SSHLQRCCTV*FMHDTF*PARV*LQCWRSSRTTTLVDAPGCTAVASPAFQQGNQ 471
+S+MN + LQRC *FM D F* + LQCW ++RT TL D CT A+ AFQ ++
Sbjct: 260 KSRMNLLNQLQRCFMD*FMFDIF*QVKGWLQCWINTRTMTLADVQECTVAANHAFQLASR 439
Query: 470 MFLDRAL*RYIVRNAKNLTIQDPSTKAT 387
FL +*++ ++ K TI+DP+ KAT
Sbjct: 440 TFLVLVM*KFTAQSVKISTIRDPNIKAT 523
Score = 80.8 bits (170), Expect(2) = 2e-032
Identities = 32/70 (45%), Positives = 50/70 (71%)
Frame = +1 / -2
Query: 673 RLNV*DEIKCIIIIWHLITQTTQVKIILYIVIIDLTKEFIASQCTEP*NPGRVLSLGTTH 852
RL++ ++K I IIW+L T+++I+LY+++I+ T+E IA Q TEP*NP + S+ TT
Sbjct: 237 RLDIQYKVKSIFIIWNLTA*PTEIEIVLYVIVINFTEELIAPQATEP*NPRCIFSIRTTQ 58
Query: 853 IRIFTVSFKF 882
+ FTVS +F
Sbjct: 57 V*FFTVSVRF 28
Score = 79.0 bits (166), Expect(2) = 2e-032
Identities = 35/77 (45%), Positives = 47/77 (61%)
Frame = +1 / -2
Query: 385 DVALVLGSWIVKFFAFRTIYLHSARSRNI*LPCWKAGLATAVHPGASTKVVVLELLQHCS 564
+VAL+ GS IV+ F + H R+RN+ L WKA LA VH S KV+VL +QHCS
Sbjct: 525 NVALIFGSRIVEIFTLWAVNFHITRTRNVRLANWKAWLAATVHSWTSAKVIVLVFIQHCS 346
Query: 565 *TLAG*NVSCMN*TVQH 615
*N+S MN +++H
Sbjct: 345 QPFTC*NISNMNQSIKH 295
Score = 47.3 bits (97), Expect(2) = 3e-024
Identities = 25/56 (44%), Positives = 32/56 (57%)
Frame = -3 / +2
Query: 887 VRNLKLTVKILM*VVPRERTRPGFHGSVHCEAMNSFVRSMMTIYRMILTCVV*VIR 720
+ N LTVK *VV E+ GFHGSV C AM+S V+ M Y+ I V * ++
Sbjct: 23 MENRTLTVKNQT*VVLMEKIHRGFHGSVACGAMSSSVKLMTITYKTISISVG*AVK 190
>gb|BF265822.1|BF265822 HV_CEa0013G21f Hordeum vulgare seedling green leaf EST library
HVcDNA0004 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEa0013G21f, mRNA sequence
Length = 768
Score = 294 bits (636), Expect(3) = 5e-088
Identities = 115/133 (86%), Positives = 123/133 (92%)
Frame = -2 / +3
Query: 822 WISWFCTLRGNEFFCEIDDDYIQDDFNLCGLSNQVPYYDYALDLILDIESSNDDGFTEEQ 643
WISW+C LRGNEFFCE+DDDYIQDDFNLCGLS+QVPYYDYALDLILDIESS+ D FTEEQ
Sbjct: 300 WISWYCNLRGNEFFCEVDDDYIQDDFNLCGLSSQVPYYDYALDLILDIESSHGDIFTEEQ 479
Query: 642 NELIESSAEMLYGLIHARYILTSKGLAAMLEKFKNYDFGRCPRVYCCGQPCLPAGQSDVP 463
NEL+ES+AEMLYGLIHARYILTSKGLAAMLEK+KNYDFGRCPRVYCCG PCLP GQSD+
Sbjct: 480 NELVESAAEMLYGLIHARYILTSKGLAAMLEKYKNYDFGRCPRVYCCGTPCLPIGQSDIH 659
Query: 462 RSSTVKIYCPKCE 424
RSST K Y PK E
Sbjct: 660 RSSTRKDYWPKGE 698
Score = 153 bits (329), Expect(3) = 1e-043
Identities = 76/134 (56%), Positives = 82/134 (61%)
Frame = +2 / -3
Query: 425 SHFGQYIFTVLDLGTSDCPAGRQGWPQQYTLGHLPKS*FLNFSNIAARPLLVKMYRA*IK 604
S GQ F VLD SDCP GR G PQQ T GH PKS*FL FS+IAA PLLV+MYRA*I
Sbjct: 697 SPLGQ*SFLVLDR*ISDCPIGRHGVPQQ*TRGHRPKS*FLYFSSIAANPLLVRMYRA*IS 518
Query: 605 PYSISADDSINSFCSSVNPSSLEDXXXXXXXXXXXXYGT*LLRPHRLKXXXXXXXXXXQK 784
PY+ISA DS +SFCSSV S ED YGT*LL P RLK QK
Sbjct: 517 PYNISAADSTSSFCSSVKISPWEDSISKMRSRA*S*YGT*LLSPQRLKSS*M*SSSTSQK 338
Query: 785 NSLPRNVQNHEIQD 826
NS P +Q HEI +
Sbjct: 337 NSFPLRLQYHEIHE 296
Score = 127 bits (271), Expect(3) = 8e-036
Identities = 65/146 (44%), Positives = 77/146 (52%)
Frame = +3 / -1
Query: 465 EHLIALLEGRAGHSSTPWGIYQSRSS*TSPTLQLDPCWLKCIVHELNRTASLQMTRLIHF 644
E+LI L G HS+ I QSRSS SP Q W +CIVHE T S Q+ L HF
Sbjct: 657 EYLIVQLVGMVSHSNKHVDIVQSRSSCISPA*QPTLYWSECIVHESAHTTSQQLIPLAHF 478
Query: 645 APR*TRHH*KTQCLR*DQVHNHNMAPDYSDHTG*NHPVYSHHRSHKRIHCLAMYRTMKSR 824
* HH KT+ L+*DQ HNHNM D H *+H +HHR H+R H L TMKS
Sbjct: 477 VLL*KYHHGKTRYLK*DQEHNHNMELDC*AHKD*SHLECNHHRLHRRTHSLLGCNTMKSM 298
Query: 825 TCPLPRNHSHQNLHCQFQIPHHQTPP 902
L ++H H LHC P + P
Sbjct: 297 RYLLHQSHQHLMLHCPTLTPLRSSGP 220
Score = 123 bits (263), Expect(2) = 7e-032
Identities = 68/150 (45%), Positives = 94/150 (62%)
Frame = -1 / +2
Query: 868 Q*RF*CEWFRGRGHVLDFMVLYIARQ*ILL*DR**LYTG*F*PVWSE*SGAIL*LCT*SH 689
Q* C W R +++DFMVL R+*+LL* R**L++ * +W+ S +IL*LC+*SH
Sbjct: 254 Q*SIRCWWL*WRRYLMDFMVLQPKRE*VLL*SR**LHSR*LQSLWA*QSSSIL*LCS*SH 433
Query: 688 LRH*VF***RVYRGAK*INRVICRDAVRFNSCTIHFNQQGSSCNVGEVQELRLW*MPQGV 509
R+ VF * +R K* + + C D V +SCTIH +Q C GE+QELRLW M +
Sbjct: 434 FRYRVFPW*YFHRRTK*ASGISC*DVVWADSCTIHSDQ*RVGCYAGEIQELRLWTMSTCL 613
Query: 508 LLWPALPSSRAIRCS*IEHCEDILSEMRRT 419
LLW +P++ IR S I + E +L+ R+T
Sbjct: 614 LLWDTMPTNWTIRYSPI*YKERLLA*GRKT 703
Score = 72.1 bits (151), Expect(3) = 5e-027
Identities = 32/70 (45%), Positives = 49/70 (70%)
Frame = +1 / -2
Query: 661 VIIRRLNV*DEIKCIIIIWHLITQTTQVKIILYIVIIDLTKEFIASQCTEP*NPGRVLSL 840
+ + RL++*+EIK IIIIW+L + T++++IL ++IID T+E I S P*NP + S+
Sbjct: 461 ITMGRLDI*NEIKSIIIIWNLTAKPTKIEVILNVIIIDFTEELIPS*VAIP*NP*GIFSI 282
Query: 841 GTTHIRIFTV 870
T+I FTV
Sbjct: 281 RATNI*CFTV 252
Score = 63.8 bits (133), Expect(3) = 5e-027
Identities = 32/64 (50%), Positives = 37/64 (57%)
Frame = +1 / -2
Query: 424 FAFRTIYLHSARSRNI*LPCWKAGLATAVHPGASTKVVVLELLQHCS*TLAG*NVSCMN* 603
FA R + RS NI*L W A TA++ S+KVVVL LQH S G NVSCMN
Sbjct: 698 FALRPVIFPCTRSVNI*LSNW*AWCPTAINTWTSSKVVVLVFLQHSSQPFTGQNVSCMNQ 519
Query: 604 TVQH 615
+QH
Sbjct: 518 PIQH 507
Score = 45.5 bits (93), Expect(3) = 5e-088
Identities = 17/26 (65%), Positives = 23/26 (88%)
Frame = -2 / +3
Query: 1047 GGAGMDRKRIKDALEKHLERSSPSTS 970
GGAG+DRKRI +AL+KHLE+++ S S
Sbjct: 75 GGAGLDRKRISEALDKHLEKAAASPS 152
Score = 44.6 bits (91), Expect(3) = 1e-043
Identities = 19/27 (70%), Positives = 20/27 (74%)
Frame = +2 / -3
Query: 968 LEVDGDDLSRCFSSASLMRFRSIPAPP 1048
+E D SRC SSASLMRFRS PAPP
Sbjct: 154 VEGDAAAFSRCLSSASLMRFRSSPAPP 74
Score = 40.0 bits (81), Expect(3) = 8e-036
Identities = 17/23 (73%), Positives = 18/23 (78%)
Frame = +1 / -2
Query: 970 GGRRRRPLQVLLERVLDALPVHP 1038
GGRR R LQVL+ER DALPV P
Sbjct: 152 GGRRGRLLQVLIERFADALPVQP 84
Score = 34.5 bits (69), Expect(2) = 7e-032
Identities = 18/33 (54%), Positives = 19/33 (57%)
Frame = -1 / +2
Query: 1048 RRRRDGPEAHQGRAREAPGEVVAVYLQGRRVQG 950
RR GPEAHQ AR APGE V L R+ G
Sbjct: 74 RRGGAGPEAHQRSAR*APGEGGRVALHVERLGG 172
Score = 29.9 bits (59), Expect(3) = 5e-088
Identities = 12/21 (57%), Positives = 16/21 (76%)
Frame = -2 / +1
Query: 447 KIYCPKCEELNYPRSKYQGNI 385
KI + ++L YPRSKYQG+I
Sbjct: 676 KITGLRAKDLYYPRSKYQGSI 738
Score = 23.5 bits (45), Expect(3) = 5e-027
Identities = 10/14 (71%), Positives = 11/14 (78%)
Frame = +3 / -1
Query: 996 GASRARP*CASGPS 1037
GA RA *CASGP+
Sbjct: 126 GAYRALR*CASGPA 85
Score = 22.1 bits (42), Expect(3) = 8e-036
Identities = 10/21 (47%), Positives = 12/21 (57%)
Frame = +2 / -2
Query: 386 MLPWYLDLG*LSSSHFGQYIF 448
+LPWYL+ G* S IF
Sbjct: 737 ILPWYLERG**RSFALRPVIF 675
Score = 22.1 bits (42), Expect(3) = 1e-043
Identities = 8/14 (57%), Positives = 10/14 (71%)
Frame = +1 / -1
Query: 385 DVALVLGSWIVKFF 426
D ALV +WIV+ F
Sbjct: 738 DTALVFRTWIVEVF 697
>gb|BQ663500.1|BQ663500 HU02O17u HU Hordeum vulgare subsp. vulgare cDNA clone HU02O17
3-PRIME, mRNA sequence
Length = 596
Score = 316 bits (684), Expect(2) = 5e-088
Identities = 123/132 (93%), Positives = 129/132 (97%)
Frame = -2 / -2
Query: 645 QNELIESSAEMLYGLIHARYILTSKGLAAMLEKFKNYDFGRCPRVYCCGQPCLPAGQSDV 466
QNELIESSAEMLYGLIHARYILTSKGLAAMLEKFKNYDFGRCPRVYCCGQPCLPAGQSD+
Sbjct: 595 QNELIESSAEMLYGLIHARYILTSKGLAAMLEKFKNYDFGRCPRVYCCGQPCLPAGQSDI 416
Query: 465 PRSSTVKIYCPKCEELNYPRSKYQGNIDGSYFGTTFPHLFLMTYSHLKPQKPSQQYTPRV 286
PRSSTVK++CPKCE+L+YPRSKYQGNIDG+YFGTTFPHLFLMTY HLKPQKPSQQY PRV
Sbjct: 415 PRSSTVKVFCPKCEDLHYPRSKYQGNIDGAYFGTTFPHLFLMTYPHLKPQKPSQQYVPRV 236
Query: 285 FGFKLHKPS*QS 250
FGFKLHK S*QS
Sbjct: 235 FGFKLHKQS*QS 200
Score = 286 bits (620), Expect(2) = 3e-081
Identities = 117/131 (89%), Positives = 119/131 (90%)
Frame = +2 / +3
Query: 254 CHDGL*SLKPKTLGVYCCDGFCGFKCE*VIRKR*GNVVPKYDPSMLPWYLDLG*LSSSHF 433
CHD L*SLKPKTLG YCCDGFCGF+C VI+KR*GNVVPKY PSMLPWYLDLG* SSHF
Sbjct: 204 CHDCL*SLKPKTLGTYCCDGFCGFRCGYVIKKR*GNVVPKYAPSMLPWYLDLG*CKSSHF 383
Query: 434 GQYIFTVLDLGTSDCPAGRQGWPQQYTLGHLPKS*FLNFSNIAARPLLVKMYRA*IKPYS 613
GQ FTVLDLG SDCPAGRQGWPQQYT GHLPKS*FLNFSNIAARPLLVKMYRA IKPYS
Sbjct: 384 GQNTFTVLDLGMSDCPAGRQGWPQQYTRGHLPKS*FLNFSNIAARPLLVKMYRAWIKPYS 563
Query: 614 ISADDSINSFC 646
ISADDSINSFC
Sbjct: 564 ISADDSINSFC 596
Score = 194 bits (418), Expect(2) = 3e-050
Identities = 86/131 (65%), Positives = 98/131 (74%)
Frame = -1 / -1
Query: 646 AK*INRVICRDAVRFNSCTIHFNQQGSSCNVGEVQELRLW*MPQGVLLWPALPSSRAIRC 467
AK*IN VICRDAV FN CT+H N QGSSCNV +VQEL W MP +LLWPAL SSRAIR
Sbjct: 596 AK*IN*VICRDAVWFNPCTVHLN*QGSSCNVRKVQEL*FWQMPSSILLWPALSSSRAIRH 417
Query: 466 S*IEHCEDILSEMRRT*LSKIQVPRQHRWIILWDDIPSSFPDDXXXXXXXXAVTAIHSKG 287
S*++H E +LS+M R LSK+QVPRQH W ILW D+PSS DD A+TAI SKG
Sbjct: 416 S*VKHSEGVLSKM*RLTLSKVQVPRQH*WSILWYDVPSSLLDDISTPEATEAITAIRSKG 237
Query: 286 FRLQTSQAVMT 254
F LQTSQA++T
Sbjct: 236 FWLQTSQAIVT 204
Score = 168 bits (362), Expect(2) = 3e-045
Identities = 80/130 (61%), Positives = 88/130 (67%)
Frame = +3 / +1
Query: 255 VMTACEV*SRKPLECIAVTXXXXXXXXXXXGKDEGMSSQSMIHRCCLGTWILDS*VLRIS 434
V ACEV*S+KPLE IAV +DEG S QSM+H+CCLGTW LDS L I
Sbjct: 205 VTIACEV*SQKPLERIAVMASVASGVDMSSRRDEGTSYQSMLHQCCLGTWTLDSVSLHIL 384
Query: 435 DNISSQCSI*EHLIALLEGRAGHSSTPWGIYQSRSS*TSPTLQLDPCWLKCIVHELNRTA 614
D S C *E LIALLE RAGHSS GI Q+ +S*T TLQLDPC L+C VH LN TA
Sbjct: 385 DKTPSLCLT*ECLIALLEDRAGHSSILEGICQNHNS*TFLTLQLDPC*LRCTVHGLNHTA 564
Query: 615 SLQMTRLIHF 644
SLQMT+LIHF
Sbjct: 565 SLQMTQLIHF 594
Score = 166 bits (358), Expect = 2e-040
Identities = 84/133 (63%), Positives = 90/133 (67%)
Frame = -3 / -3
Query: 644 KMN*SSHLQRCCTV*FMHDTF*PARV*LQCWRSSRTTTLVDAPGCTAVASPAFQQGNQMF 465
KMN* SHLQRCC V* MH T * ARV*LQC +SSR L DA TAVASP FQQGNQ F
Sbjct: 594 KMN*LSHLQRCCMV*SMHGTS*LARV*LQC*KSSRIMILADALEYTAVASPVFQQGNQTF 415
Query: 464 LDRAL*RYIVRNAKNLTIQDPSTKATSMDHTLGRHSLIFS**LXXXXXXXXRHSNTLQGF 285
L +A *R V+N K TIQ PSTKAT M+HTL R SLI S** HSNT QGF
Sbjct: 414 LGQAQ*RCFVQNVKTYTIQGPSTKATLMEHTLVRRSLISS**HIHT*SHRSHHSNTFQGF 235
Query: 284 SASNFTSRHDRVV 246
ASNFTS D ++
Sbjct: 234 LASNFTSNRDNLL 196
Score = 138 bits (296), Expect(3) = 2e-036
Identities = 61/92 (66%), Positives = 72/92 (78%)
Frame = +1 / +2
Query: 340 HQEKMRECRPKV*SIDVALVLGSWIVKFFAFRTIYLHSARSRNI*LPCWKAGLATAVHPG 519
HQE+MRE R KV SI+VALVLG WIV F F T +LH A RN+*LPCWK GLATAV+
Sbjct: 290 HQEEMRERRTKVCSINVALVLGPWIV*VFTFWTKHLHCA*PRNV*LPCWKTGLATAVYSR 469
Query: 520 ASTKVVVLELLQHCS*TLAG*NVSCMN*TVQH 615
AS K+++LEL HCS*TLA *+V CM+*T+QH
Sbjct: 470 ASAKIIILELF*HCS*TLAS*DVPCMD*TIQH 565
Score = 36.3 bits (73), Expect(2) = 3e-081
Identities = 13/26 (50%), Positives = 20/26 (76%)
Frame = +3 / +3
Query: 96 TVIISENRYNFTIVYSEAQAREFVHQ 173
T +I +NRYN + VYS+ +ARE+ +Q
Sbjct: 48 TAVIQQNRYNCSAVYSKIRAREYSNQ 125
Score = 34.1 bits (68), Expect(2) = 3e-045
Identities = 16/29 (55%), Positives = 19/29 (65%)
Frame = +1 / +1
Query: 106 YRKTDTISQ*FTARPRLANSYINNTTVFE 192
Y KTDTI+Q FTAR LA++ I FE
Sbjct: 58 YNKTDTIAQQFTARFELASTRIKRPQHFE 144
Score = 29.5 bits (58), Expect(2) = 5e-088
Identities = 12/23 (52%), Positives = 14/23 (60%)
Frame = -2 / -3
Query: 174 IDVRIREPGPRCKLL*NCICFPI 106
+D RE CKLL NCICF +
Sbjct: 126 LDSSTRELESCCKLLSNCICFVV 58
Score = 28.6 bits (56), Expect(3) = 2e-036
Identities = 11/15 (73%), Positives = 13/15 (86%)
Frame = +1 / +2
Query: 253 LS*RLVKFEAENPWS 297
LS LVKFEA+NPW+
Sbjct: 203 LSRLLVKFEAKNPWN 247
Score = 25.4 bits (49), Expect(2) = 3e-050
Identities = 14/29 (48%), Positives = 16/29 (55%)
Frame = -3 / -1
Query: 176 LLMYEFASLGLAVNYCEIVSVFRYYYCCV 90
LL+ AS LAVN IVSV Y C +
Sbjct: 128 LLIRVLASSNLAVNC*AIVSVLLYDCCVI 42
Score = 24.0 bits (46), Expect(3) = 2e-036
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = +2 / +2
Query: 95 NSNNIGKQIQFHNSLQRGPGSRIRTS 172
+S++ KQIQ +SLQ+ SR+ S
Sbjct: 47 HSSHTTKQIQLLSSLQQDSSSRVLES 124
>gb|BQ662921.1|BQ662921 HS04M10u HS Hordeum vulgare subsp. vulgare cDNA clone HS04M10
3-PRIME, mRNA sequence
Length = 588
Score = 311 bits (673), Expect(2) = 2e-086
Identities = 121/130 (93%), Positives = 127/130 (97%)
Frame = -2 / -1
Query: 639 ELIESSAEMLYGLIHARYILTSKGLAAMLEKFKNYDFGRCPRVYCCGQPCLPAGQSDVPR 460
ELIESSAEMLYGLIHARYILTSKGLAAMLEKFKNYDFGRCPRVYCCGQPCLPAGQSD+PR
Sbjct: 588 ELIESSAEMLYGLIHARYILTSKGLAAMLEKFKNYDFGRCPRVYCCGQPCLPAGQSDIPR 409
Query: 459 SSTVKIYCPKCEELNYPRSKYQGNIDGSYFGTTFPHLFLMTYSHLKPQKPSQQYTPRVFG 280
SSTVK++CPKCE+L+YPRSKYQGNIDG+YFGTTFPHLFLMTY HLKPQKPSQQY PRVFG
Sbjct: 408 SSTVKVFCPKCEDLHYPRSKYQGNIDGAYFGTTFPHLFLMTYPHLKPQKPSQQYVPRVFG 229
Query: 279 FKLHKPS*QS 250
FKLHK S*QS
Sbjct: 228 FKLHKQS*QS 199
Score = 278 bits (601), Expect(2) = 1e-078
Identities = 114/128 (89%), Positives = 116/128 (90%)
Frame = +2 / +2
Query: 254 CHDGL*SLKPKTLGVYCCDGFCGFKCE*VIRKR*GNVVPKYDPSMLPWYLDLG*LSSSHF 433
CHD L*SLKPKTLG YCCDGFCGF+C VI+KR*GNVVPKY PSMLPWYLDLG* SSHF
Sbjct: 203 CHDCL*SLKPKTLGTYCCDGFCGFRCGYVIKKR*GNVVPKYAPSMLPWYLDLG*CKSSHF 382
Query: 434 GQYIFTVLDLGTSDCPAGRQGWPQQYTLGHLPKS*FLNFSNIAARPLLVKMYRA*IKPYS 613
GQ FTVLDLG SDCPAGRQGWPQQYT GHLPKS*FLNFSNIAARPLLVKMYRA IKPYS
Sbjct: 383 GQNTFTVLDLGMSDCPAGRQGWPQQYTRGHLPKS*FLNFSNIAARPLLVKMYRAWIKPYS 562
Query: 614 ISADDSIN 637
ISADDSIN
Sbjct: 563 ISADDSIN 586
Score = 189 bits (408), Expect(2) = 6e-049
Identities = 83/128 (64%), Positives = 95/128 (74%)
Frame = -1 / -3
Query: 637 INRVICRDAVRFNSCTIHFNQQGSSCNVGEVQELRLW*MPQGVLLWPALPSSRAIRCS*I 458
IN VICRDAV FN CT+H N QGSSCNV +VQEL W MP +LLWPAL SSRAIR S*+
Sbjct: 586 IN*VICRDAVWFNPCTVHLN*QGSSCNVRKVQEL*FWQMPSSILLWPALSSSRAIRHS*V 407
Query: 457 EHCEDILSEMRRT*LSKIQVPRQHRWIILWDDIPSSFPDDXXXXXXXXAVTAIHSKGFRL 278
+H E +LS+M R LSK+QVPRQH W ILW D+PSS DD A+TAI SKGF L
Sbjct: 406 KHSEGVLSKM*RLTLSKVQVPRQH*WSILWYDVPSSLLDDISTPEATEAITAIRSKGFWL 227
Query: 277 QTSQAVMT 254
QTSQA++T
Sbjct: 226 QTSQAIVT 203
Score = 162 bits (348), Expect(2) = 2e-043
Identities = 78/128 (60%), Positives = 86/128 (67%)
Frame = +3 / +3
Query: 255 VMTACEV*SRKPLECIAVTXXXXXXXXXXXGKDEGMSSQSMIHRCCLGTWILDS*VLRIS 434
V ACEV*S+KPLE IAV +DEG S QSM+H+CCLGTW LDS L I
Sbjct: 204 VTIACEV*SQKPLERIAVMASVASGVDMSSRRDEGTSYQSMLHQCCLGTWTLDSVSLHIL 383
Query: 435 DNISSQCSI*EHLIALLEGRAGHSSTPWGIYQSRSS*TSPTLQLDPCWLKCIVHELNRTA 614
D S C *E LIALLE RAGHSS GI Q+ +S*T TLQLDPC L+C VH LN TA
Sbjct: 384 DKTPSLCLT*ECLIALLEDRAGHSSILEGICQNHNS*TFLTLQLDPC*LRCTVHGLNHTA 563
Query: 615 SLQMTRLI 638
SLQMT+LI
Sbjct: 564 SLQMTQLI 587
Score = 162 bits (348), Expect = 4e-039
Identities = 82/131 (62%), Positives = 88/131 (67%)
Frame = -3 / -2
Query: 638 N*SSHLQRCCTV*FMHDTF*PARV*LQCWRSSRTTTLVDAPGCTAVASPAFQQGNQMFLD 459
N* SHLQRCC V* MH T * ARV*LQC +SSR L DA TAVASP FQQGNQ FL
Sbjct: 587 N*LSHLQRCCMV*SMHGTS*LARV*LQC*KSSRIMILADALEYTAVASPVFQQGNQTFLG 408
Query: 458 RAL*RYIVRNAKNLTIQDPSTKATSMDHTLGRHSLIFS**LXXXXXXXXRHSNTLQGFSA 279
+A *R V+N K TIQ PSTKAT M+HTL R SLI S** HSNT QGF A
Sbjct: 407 QAQ*RCFVQNVKTYTIQGPSTKATLMEHTLVRRSLISS**HIHT*SHRSHHSNTFQGFLA 228
Query: 278 SNFTSRHDRVV 246
SNFTS D ++
Sbjct: 227 SNFTSNRDNLL 195
Score = 138 bits (296), Expect(3) = 2e-036
Identities = 61/92 (66%), Positives = 72/92 (78%)
Frame = +1 / +1
Query: 340 HQEKMRECRPKV*SIDVALVLGSWIVKFFAFRTIYLHSARSRNI*LPCWKAGLATAVHPG 519
HQE+MRE R KV SI+VALVLG WIV F F T +LH A RN+*LPCWK GLATAV+
Sbjct: 289 HQEEMRERRTKVCSINVALVLGPWIV*VFTFWTKHLHCA*PRNV*LPCWKTGLATAVYSR 468
Query: 520 ASTKVVVLELLQHCS*TLAG*NVSCMN*TVQH 615
AS K+++LEL HCS*TLA *+V CM+*T+QH
Sbjct: 469 ASAKIIILELF*HCS*TLAS*DVPCMD*TIQH 564
Score = 36.3 bits (73), Expect(2) = 1e-078
Identities = 13/26 (50%), Positives = 20/26 (76%)
Frame = +3 / +2
Query: 96 TVIISENRYNFTIVYSEAQAREFVHQ 173
T +I +NRYN + VYS+ +ARE+ +Q
Sbjct: 47 TAVIQQNRYNCSAVYSKIRAREYSNQ 124
Score = 34.1 bits (68), Expect(2) = 2e-043
Identities = 16/29 (55%), Positives = 19/29 (65%)
Frame = +1 / +3
Query: 106 YRKTDTISQ*FTARPRLANSYINNTTVFE 192
Y KTDTI+Q FTAR LA++ I FE
Sbjct: 57 YNKTDTIAQQFTARFELASTRIKRPQHFE 143
Score = 29.5 bits (58), Expect(2) = 2e-086
Identities = 12/23 (52%), Positives = 14/23 (60%)
Frame = -2 / -2
Query: 174 IDVRIREPGPRCKLL*NCICFPI 106
+D RE CKLL NCICF +
Sbjct: 125 LDSSTRELESCCKLLSNCICFVV 57
Score = 28.6 bits (56), Expect(3) = 2e-036
Identities = 11/15 (73%), Positives = 13/15 (86%)
Frame = +1 / +1
Query: 253 LS*RLVKFEAENPWS 297
LS LVKFEA+NPW+
Sbjct: 202 LSRLLVKFEAKNPWN 246
Score = 25.4 bits (49), Expect(2) = 6e-049
Identities = 14/29 (48%), Positives = 16/29 (55%)
Frame = -3 / -3
Query: 176 LLMYEFASLGLAVNYCEIVSVFRYYYCCV 90
LL+ AS LAVN IVSV Y C +
Sbjct: 127 LLIRVLASSNLAVNC*AIVSVLLYDCCVI 41
Score = 24.0 bits (46), Expect(3) = 2e-036
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = +2 / +1
Query: 95 NSNNIGKQIQFHNSLQRGPGSRIRTS 172
+S++ KQIQ +SLQ+ SR+ S
Sbjct: 46 HSSHTTKQIQLLSSLQQDSSSRVLES 123
>gb|AV917174.1|AV917174 AV917174 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags8d05 5', mRNA sequence
Length = 623
Score = 311 bits (674), Expect = 4e-084
Identities = 119/132 (90%), Positives = 127/132 (96%)
Frame = -2 / +1
Query: 822 WISWFCTLRGNEFFCEIDDDYIQDDFNLCGLSNQVPYYDYALDLILDIESSNDDGFTEEQ 643
WISW+C LRGNEFFCE+DDDYIQDDFNLCGLS+QVPYYDYALDLILDIESS+ D FTEEQ
Sbjct: 226 WISWYCNLRGNEFFCEVDDDYIQDDFNLCGLSSQVPYYDYALDLILDIESSHGDIFTEEQ 405
Query: 642 NELIESSAEMLYGLIHARYILTSKGLAAMLEKFKNYDFGRCPRVYCCGQPCLPAGQSDVP 463
NEL+ES+AEMLYGLIHARYILTSKGLAAMLEK+KNYDFGRCPRVYCCGQPCLP GQSD+
Sbjct: 406 NELVESAAEMLYGLIHARYILTSKGLAAMLEKYKNYDFGRCPRVYCCGQPCLPIGQSDIH 585
Query: 462 RSSTVKIYCPKC 427
RSSTVKIYCPKC
Sbjct: 586 RSSTVKIYCPKC 621
Score = 169 bits (363), Expect = 3e-041
Identities = 80/134 (59%), Positives = 86/134 (64%)
Frame = +2 / -1
Query: 425 SHFGQYIFTVLDLGTSDCPAGRQGWPQQYTLGHLPKS*FLNFSNIAARPLLVKMYRA*IK 604
SH GQYIFTVLD SDCP GR G PQQ T GH PKS*FL FS+IAA PLLV+MYRA*I
Sbjct: 623 SHLGQYIFTVLDR*ISDCPIGRHGCPQQ*TRGHRPKS*FLYFSSIAANPLLVRMYRA*IS 444
Query: 605 PYSISADDSINSFCSSVNPSSLEDXXXXXXXXXXXXYGT*LLRPHRLKXXXXXXXXXXQK 784
PY+ISA DS +SFCSSV S ED YGT*LL P RLK QK
Sbjct: 443 PYNISAADSTSSFCSSVKISPWEDSISKMRSRA*S*YGT*LLSPQRLKSS*M*SSSTSQK 264
Query: 785 NSLPRNVQNHEIQD 826
NS P +Q HEI +
Sbjct: 263 NSFPLRLQYHEIHE 222
Score = 130 bits (279), Expect = 1e-029
Identities = 70/156 (44%), Positives = 83/156 (53%)
Frame = +3 / -2
Query: 435 DNISSQCSI*EHLIALLEGRAGHSSTPWGIYQSRSS*TSPTLQLDPCWLKCIVHELNRTA 614
D+ISS I E+LI L G HS+ I QSRSS SP Q W +CIVHE T
Sbjct: 613 DSISSLY*IGEYLIVQLVGMVVHSNKHVDIVQSRSSCISPA*QPTLYWSECIVHESAHTT 434
Query: 615 SLQMTRLIHFAPR*TRHH*KTQCLR*DQVHNHNMAPDYSDHTG*NHPVYSHHRSHKRIHC 794
S Q+ L HF * HH KT+ L+*DQ HNHNM D H *+H +HHR H+R H
Sbjct: 433 SQQLIPLAHFVLL*KYHHGKTRYLK*DQEHNHNMELDC*AHKD*SHLECNHHRLHRRTHS 254
Query: 795 LAMYRTMKSRTCPLPRNHSHQNLHCQFQIPHHQTPP 902
L TMKS L ++H H LHC P + P
Sbjct: 253 LLGCNTMKSMRYLLHQSHQHLMLHCPTLTPLRSSGP 146
Score = 128 bits (275), Expect = 4e-029
Identities = 70/148 (47%), Positives = 94/148 (63%)
Frame = -1 / +3
Query: 868 Q*RF*CEWFRGRGHVLDFMVLYIARQ*ILL*DR**LYTG*F*PVWSE*SGAIL*LCT*SH 689
Q* C W R +++DFMVL R+*+LL* R**L++ * +W+ S +IL*LC+*SH
Sbjct: 180 Q*SIRCWWL*WRRYLMDFMVLQPKRE*VLL*SR**LHSR*LQSLWA*QSSSIL*LCS*SH 359
Query: 688 LRH*VF***RVYRGAK*INRVICRDAVRFNSCTIHFNQQGSSCNVGEVQELRLW*MPQGV 509
R+ VF * +R K* + + C D V +SCTIH +Q C GE+QELRLW M +
Sbjct: 360 FRYRVFPW*YFHRRTK*ASGISC*DVVWADSCTIHSDQ*RVGCYAGEIQELRLWTMSTCL 539
Query: 508 LLWPALPSSRAIRCS*IEHCEDILSEMR 425
LLW +P++ IR S I + EDILS +R
Sbjct: 540 LLWTTMPTNWTIRYSPI*YSEDILS*VR 623
Score = 77.1 bits (162), Expect(2) = 3e-029
Identities = 36/63 (57%), Positives = 42/63 (66%)
Frame = +1 / -3
Query: 427 AFRTIYLHSARSRNI*LPCWKAGLATAVHPGASTKVVVLELLQHCS*TLAG*NVSCMN*T 606
A RT+YLH RS NI*L W A L+TA++ S+KVVVL LQH S G NVSCMN
Sbjct: 621 ALRTVYLHCTRSVNI*LSNW*AWLSTAINTWTSSKVVVLVFLQHSSQPFTGQNVSCMNQP 442
Query: 607 VQH 615
+QH
Sbjct: 441 IQH 433
Score = 72.1 bits (151), Expect(2) = 3e-029
Identities = 32/70 (45%), Positives = 49/70 (70%)
Frame = +1 / -3
Query: 661 VIIRRLNV*DEIKCIIIIWHLITQTTQVKIILYIVIIDLTKEFIASQCTEP*NPGRVLSL 840
+ + RL++*+EIK IIIIW+L + T++++IL ++IID T+E I S P*NP + S+
Sbjct: 387 ITMGRLDI*NEIKSIIIIWNLTAKPTKIEVILNVIIIDFTEELIPS*VAIP*NP*GIFSI 208
Query: 841 GTTHIRIFTV 870
T+I FTV
Sbjct: 207 RATNI*CFTV 178
>gb|CV062418.1|CV062418 BNEL79g9 Barley EST endosperm library Hordeum vulgare subsp.
vulgare cDNA clone BNEL79g9 5' similar to possible
protein kinase CK2 regulatory subunit, mRNA sequence
Length = 700
Score = 307 bits (664), Expect = 1e-082
Identities = 118/134 (88%), Positives = 126/134 (94%)
Frame = -2 / -1
Query: 663 DGFTEEQNELIESSAEMLYGLIHARYILTSKGLAAMLEKFKNYDFGRCPRVYCCGQPCLP 484
D FTEEQNEL+ES AEMLYGLIHARYILTSKGLAAMLEK+KNYDFGRCPRVYCCGQPCLP
Sbjct: 697 DIFTEEQNELVESPAEMLYGLIHARYILTSKGLAAMLEKYKNYDFGRCPRVYCCGQPCLP 518
Query: 483 AGQSDVPRSSTVKIYCPKCEELNYPRSKYQGNIDGSYFGTTFPHLFLMTYSHLKPQKPSQ 304
GQSD+ RSSTVKIYCPKCE++ YPRSKYQGNIDG+Y+GTTFPHLFLMTY HLKPQK SQ
Sbjct: 517 IGQSDIHRSSTVKIYCPKCEDIYYPRSKYQGNIDGAYYGTTFPHLFLMTYDHLKPQKTSQ 338
Query: 303 QYTPRVFGFKLHKP 262
+Y PRVFGFKLHKP
Sbjct: 337 RYVPRVFGFKLHKP 296
Score = 192 bits (414), Expect = 3e-048
Identities = 91/134 (67%), Positives = 99/134 (73%)
Frame = +2 / +3
Query: 263 GL*SLKPKTLGVYCCDGFCGFKCE*VIRKR*GNVVPKYDPSMLPWYLDLG*LSSSHFGQY 442
GL SLKP T G C+ F G + VIRKR*GNVVP PS+LPWYL+ G* SSH GQY
Sbjct: 297 GLWSLKPNTRGT*RCEVFWGLR*SYVIRKR*GNVVP**APSILPWYLERG**MSSHLGQY 476
Query: 443 IFTVLDLGTSDCPAGRQGWPQQYTLGHLPKS*FLNFSNIAARPLLVKMYRA*IKPYSISA 622
IFTVLD SDCP GR G PQQ T GH PKS*FL FS+IAA PLLV+MYRA*I PY+ISA
Sbjct: 477 IFTVLDR*ISDCPIGRHGCPQQ*TRGHRPKS*FLYFSSIAANPLLVRMYRA*IXPYNISA 656
Query: 623 DDSINSFCSSVNPS 664
DS +SFCSSV S
Sbjct: 657 GDSTSSFCSSVKIS 698
Score = 114 bits (244), Expect = 8e-025
Identities = 51/92 (55%), Positives = 64/92 (69%)
Frame = +1 / +2
Query: 340 HQEKMRECRPKV*SIDVALVLGSWIVKFFAFRTIYLHSARSRNI*LPCWKAGLATAVHPG 519
HQ+K+R+C P V S+++ALV +WIV FA RT+YLH RS NI*L W A L+TA++
Sbjct: 374 HQKKVRKCCPIVGSVNIALVFRTWIVDVFALRTVYLHCTRSVNI*LSNW*AWLSTAINTW 553
Query: 520 ASTKVVVLELLQHCS*TLAG*NVSCMN*TVQH 615
S+KVVVL LQH S G NVSCMN +QH
Sbjct: 554 TSSKVVVLVFLQHSSQPFTGQNVSCMNQXIQH 649
Score = 110 bits (235), Expect = 1e-023
Identities = 60/139 (43%), Positives = 77/139 (55%)
Frame = -3 / -2
Query: 650 RSKMN*SSHLQRCCTV*FMHDTF*PARV*LQCWRSSRTTTLVDAPGCTAVASPAFQQGNQ 471
++KM+* +HL RCC *FMHDTF*P + L CWR++RTTTL D AV + A+Q NQ
Sbjct: 684 KNKMS*WNHLLRCCMX*FMHDTF*PVKGWLLCWRNTRTTTLDDVHVFIAVDNHAYQLDNQ 505
Query: 470 MFLDRAL*RYIVRNAKNLTIQDPSTKATSMDHTLGRHSLIFS**LXXXXXXXXRHSNTLQ 291
+F D *RY V +AK TI +TKA + T+G+H L F ** S
Sbjct: 504 IFTDLVQ*RYTVLSAKTSTIHVLNTKAILTEPTMGQHFLTFF**RTITSSPKRPRSAMFL 325
Query: 290 GFSASNFTSRHDRVVASAR 234
+ AS+ TS V R
Sbjct: 324 VYLASSSTSHDVEVKEKIR 268
Score = 109 bits (233), Expect = 3e-023
Identities = 56/132 (42%), Positives = 75/132 (56%)
Frame = -1 / -3
Query: 655 YRGAK*INRVICRDAVRFNSCTIHFNQQGSSCNVGEVQELRLW*MPQGVLLWPALPSSRA 476
+R K* + + C D V +SCTIH +Q C GE+QELRLW M +LLW +P++
Sbjct: 689 HRRTK*ASGITC*DVVWXDSCTIHSDQ*RVGCYAGEIQELRLWTMSTCLLLWTTMPTNWT 510
Query: 475 IRCS*IEHCEDILSEMRRT*LSKIQVPRQHRWIILWDDIPSSFPDDXXXXXXXXAVTAIH 296
IR S I + EDILS +RR LS +PRQ+ +LWD+I S F DD + A+
Sbjct: 509 IRYSPI*YSEDILS*VRRHLLSTF*IPRQY*RSLLWDNISSPFSDDVRSPQAPKDLAALC 330
Query: 295 SKGFRLQTSQAV 260
S LQ QA+
Sbjct: 329 SSCIWLQAPQAM 294
>gb|BQ470277.1|BQ470277 HX02G12r HX Hordeum vulgare subsp. vulgare cDNA clone HX02G12
5-PRIME, mRNA sequence
Length = 652
Score = 256 bits (553), Expect(3) = 2e-080
Identities = 106/128 (82%), Positives = 108/128 (84%)
Frame = -2 / +2
Query: 900 EVSDGEEFXXXXXXXXXXXXXXXXXSWISWFCTLRGNEFFCEIDDDYIQDDFNLCGLSNQ 721
+VSD EEF SWISWFC+LRGNEFFCEIDDDYIQDDFNLCGLSNQ
Sbjct: 269 KVSDVEEFETDSEDSDVSGSEGEDTSWISWFCSLRGNEFFCEIDDDYIQDDFNLCGLSNQ 448
Query: 720 VPYYDYALDLILDIESSNDDGFTEEQNELIESSAEMLYGLIHARYILTSKGLAAMLEKFK 541
VPYYDYALDLILDIESSN D FTEEQNELIESSAEMLYGLIHARYILTSKGLAAMLEKFK
Sbjct: 449 VPYYDYALDLILDIESSNGDVFTEEQNELIESSAEMLYGLIHARYILTSKGLAAMLEKFK 628
Query: 540 NYDFGRCP 517
NYDFGRCP
Sbjct: 629 NYDFGRCP 652
Score = 219 bits (473), Expect(2) = 7e-067
Identities = 89/125 (71%), Positives = 101/125 (80%)
Frame = +3 / -3
Query: 519 GIYQSRSS*TSPTLQLDPCWLKCIVHELNRTASLQMTRLIHFAPR*TRHH*KTQCLR*DQ 698
GI Q+ +S*T TLQLDPC L+C VH LN TASLQMT+LIHFAP+* HH*KTQCL *DQ
Sbjct: 650 GICQNHNS*TFLTLQLDPC*LRCTVHGLNHTASLQMTQLIHFAPQ*IHHH*KTQCLG*DQ 471
Query: 699 VHNHNMAPDYSDHTG*NHPVYSHHRSHKRIHCLAMYRTMKSRTCPLPRNHSHQNLHCQFQ 878
VHNHNMAPD H *NHPVY+HH+SH+RI CLA YRTMKS+ CPL +N HQNLHCQF+
Sbjct: 470 VHNHNMAPDCLGHRD*NHPVYNHHQSHRRIRCLASYRTMKSKMCPLLQNR*HQNLHCQFR 291
Query: 879 IPHHQ 893
IP +
Sbjct: 290 IPRRR 276
Score = 171 bits (369), Expect(2) = 9e-050
Identities = 87/119 (73%), Positives = 95/119 (79%)
Frame = -1 / +1
Query: 874 N*Q*RF*CEWFRGRGHVLDFMVLYIARQ*ILL*DR**LYTG*F*PVWSE*SGAIL*LCT* 695
N*Q*RF*C F RGH+LDFMVL +ARQ ILL*D **LYTG*F +W + SGAIL*LCT*
Sbjct: 295 N*Q*RF*C*RF*RRGHILDFMVL*LARQRILL*D***LYTG*FQSLWPKQSGAIL*LCT* 474
Query: 694 SHLRH*VF***RVYRGAK*INRVICRDAVRFNSCTIHFNQQGSSCNVGEVQELRLW*MP 518
SH RH*VF* * ++ GAK*IN VICRDAV FN CT+H N QGSSCNV +VQEL W MP
Sbjct: 475 SHPRH*VF*W*CIH*GAK*IN*VICRDAVWFNPCTVHLN*QGSSCNVRKVQEL*FWQMP 651
Score = 164 bits (353), Expect(2) = 7e-042
Identities = 75/103 (72%), Positives = 76/103 (73%)
Frame = +2 / -2
Query: 518 GHLPKS*FLNFSNIAARPLLVKMYRA*IKPYSISADDSINSFCSSVNPSSLEDXXXXXXX 697
GHLPKS*FLNFSNIAARPLLVKMYRA IKPYSISADDSINSFCSSVN S LED
Sbjct: 651 GHLPKS*FLNFSNIAARPLLVKMYRAWIKPYSISADDSINSFCSSVNTSPLEDSMSRMRS 472
Query: 698 XXXXXYGT*LLRPHRLKXXXXXXXXXXQKNSLPRNVQNHEIQD 826
YGT*LLRP RLK QKNSLPR +QNHEIQD
Sbjct: 471 SA*S*YGT*LLRPQRLKSSCI*SSSISQKNSLPRKLQNHEIQD 343
Score = 128 bits (275), Expect(3) = 4e-046
Identities = 55/77 (71%), Positives = 66/77 (85%)
Frame = +1 / -1
Query: 661 VIIRRLNV*DEIKCIIIIWHLITQTTQVKIILYIVIIDLTKEFIASQCTEP*NPGRVLSL 840
+ IRRLNV*DEIKCIIIIWHLI T+++IILYI+II+LT+EF+ASQ TEP*NP VLS
Sbjct: 508 ITIRRLNV*DEIKCIIIIWHLIA*ATEIEIILYIIIINLTEEFVASQATEP*NPRCVLSF 329
Query: 841 GTTHIRIFTVSFKFLTI 891
T +IRIFTVSF+FL +
Sbjct: 328 RTANIRIFTVSFEFLDV 278
Score = 82.2 bits (173), Expect(2) = 7e-029
Identities = 39/56 (69%), Positives = 40/56 (71%)
Frame = -3 / +3
Query: 884 RNLKLTVKILM*VVPRERTRPGFHGSVHCEAMNSFVRSMMTIYRMILTCVV*VIRC 717
RN KLTVKILM V +ERT GFHGSV CEA NS VR MM IYRMI V * IRC
Sbjct: 285 RNSKLTVKILMLAVLKERTHLGFHGSVACEATNSSVRLMMIIYRMISISVA*AIRC 452
Score = 65.7 bits (137), Expect(2) = 7e-029
Identities = 32/44 (72%), Positives = 33/44 (75%)
Frame = -3 / +3
Query: 650 RSKMN*SSHLQRCCTV*FMHDTF*PARV*LQCWRSSRTTTLVDA 519
RSKMN* SHLQRCC V* MH T * ARV*LQC +SSR L DA
Sbjct: 519 RSKMN*LSHLQRCCMV*SMHGTS*LARV*LQC*KSSRIMILADA 650
Score = 55.6 bits (115), Expect(2) = 7e-067
Identities = 24/28 (85%), Positives = 24/28 (85%)
Frame = +2 / -2
Query: 965 PLEVDGDDLSRCFSSASLMRFRSIPAPP 1048
PLEVDGD LS CFSSASLMRFRSI A P
Sbjct: 204 PLEVDGDGLSVCFSSASLMRFRSISAAP 121
Score = 55.1 bits (114), Expect(3) = 2e-080
Identities = 23/28 (82%), Positives = 24/28 (85%)
Frame = -2 / +2
Query: 1047 GGAGMDRKRIKDALEKHLERSSPSTSRG 964
G A MDRKRIK+ALEKH ER SPSTSRG
Sbjct: 122 GAAEMDRKRIKEALEKHTERPSPSTSRG 205
Score = 52.4 bits (108), Expect(3) = 4e-046
Identities = 21/32 (65%), Positives = 27/32 (84%)
Frame = +1 / -1
Query: 520 ASTKVVVLELLQHCS*TLAG*NVSCMN*TVQH 615
AS K+++LEL HCS*TLA *+V CM+*T+QH
Sbjct: 649 ASAKIIILELF*HCS*TLAS*DVPCMD*TIQH 554
Score = 46.0 bits (94), Expect(2) = 9e-050
Identities = 19/28 (67%), Positives = 21/28 (75%)
Frame = -1 / +1
Query: 1048 RRRRDGPEAHQGRAREAPGEVVAVYLQG 965
RRR DGPEAHQG A E G+ V V+LQG
Sbjct: 121 RRRGDGPEAHQGGAGETHGKAVPVHLQG 204
Score = 42.8 bits (87), Expect(3) = 4e-046
Identities = 18/29 (62%), Positives = 21/29 (72%)
Frame = +1 / -1
Query: 949 LLGHDAPGGRRRRPLQVLLERVLDALPVH 1035
LL PGG R RP +V L+R+LDALPVH
Sbjct: 220 LLPGRPPGGGRGRPFRVFLQRLLDALPVH 134
Score = 29.5 bits (58), Expect(2) = 7e-042
Identities = 13/16 (81%), Positives = 13/16 (81%)
Frame = +3 / -3
Query: 1002 SRARP*CASGPSLRRR 1049
S A P*CASGPS RRR
Sbjct: 167 SPAPP*CASGPSPRRR 120
Score = 28.1 bits (55), Expect(3) = 2e-080
Identities = 10/18 (55%), Positives = 15/18 (83%)
Frame = -2 / +2
Query: 957 SKERERLAAGKLPSSLGK 904
S+E+E LAAGK+ + +GK
Sbjct: 209 SREKEMLAAGKITTQIGK 262
>gb|BQ465196.1|BQ465196 HU02O17r HU Hordeum vulgare subsp. vulgare cDNA clone HU02O17
5-PRIME, mRNA sequence
Length = 597
Score = 256 bits (553), Expect(3) = 2e-080
Identities = 106/128 (82%), Positives = 108/128 (84%)
Frame = -2 / +2
Query: 900 EVSDGEEFXXXXXXXXXXXXXXXXXSWISWFCTLRGNEFFCEIDDDYIQDDFNLCGLSNQ 721
+VSD EEF SWISWFC+LRGNEFFCEIDDDYIQDDFNLCGLSNQ
Sbjct: 212 KVSDVEEFETDSEDSDVSGSEGEDTSWISWFCSLRGNEFFCEIDDDYIQDDFNLCGLSNQ 391
Query: 720 VPYYDYALDLILDIESSNDDGFTEEQNELIESSAEMLYGLIHARYILTSKGLAAMLEKFK 541
VPYYDYALDLILDIESSN D FTEEQNELIESSAEMLYGLIHARYILTSKGLAAMLEKFK
Sbjct: 392 VPYYDYALDLILDIESSNGDVFTEEQNELIESSAEMLYGLIHARYILTSKGLAAMLEKFK 571
Query: 540 NYDFGRCP 517
NYDFGRCP
Sbjct: 572 NYDFGRCP 595
Score = 219 bits (473), Expect(2) = 7e-067
Identities = 89/125 (71%), Positives = 101/125 (80%)
Frame = +3 / -2
Query: 519 GIYQSRSS*TSPTLQLDPCWLKCIVHELNRTASLQMTRLIHFAPR*TRHH*KTQCLR*DQ 698
GI Q+ +S*T TLQLDPC L+C VH LN TASLQMT+LIHFAP+* HH*KTQCL *DQ
Sbjct: 593 GICQNHNS*TFLTLQLDPC*LRCTVHGLNHTASLQMTQLIHFAPQ*IHHH*KTQCLG*DQ 414
Query: 699 VHNHNMAPDYSDHTG*NHPVYSHHRSHKRIHCLAMYRTMKSRTCPLPRNHSHQNLHCQFQ 878
VHNHNMAPD H *NHPVY+HH+SH+RI CLA YRTMKS+ CPL +N HQNLHCQF+
Sbjct: 413 VHNHNMAPDCLGHRD*NHPVYNHHQSHRRIRCLASYRTMKSKMCPLLQNR*HQNLHCQFR 234
Query: 879 IPHHQ 893
IP +
Sbjct: 233 IPRRR 219
Score = 171 bits (369), Expect(2) = 9e-050
Identities = 87/119 (73%), Positives = 95/119 (79%)
Frame = -1 / +1
Query: 874 N*Q*RF*CEWFRGRGHVLDFMVLYIARQ*ILL*DR**LYTG*F*PVWSE*SGAIL*LCT* 695
N*Q*RF*C F RGH+LDFMVL +ARQ ILL*D **LYTG*F +W + SGAIL*LCT*
Sbjct: 238 N*Q*RF*C*RF*RRGHILDFMVL*LARQRILL*D***LYTG*FQSLWPKQSGAIL*LCT* 417
Query: 694 SHLRH*VF***RVYRGAK*INRVICRDAVRFNSCTIHFNQQGSSCNVGEVQELRLW*MP 518
SH RH*VF* * ++ GAK*IN VICRDAV FN CT+H N QGSSCNV +VQEL W MP
Sbjct: 418 SHPRH*VF*W*CIH*GAK*IN*VICRDAVWFNPCTVHLN*QGSSCNVRKVQEL*FWQMP 594
Score = 164 bits (353), Expect(2) = 7e-042
Identities = 75/103 (72%), Positives = 76/103 (73%)
Frame = +2 / -1
Query: 518 GHLPKS*FLNFSNIAARPLLVKMYRA*IKPYSISADDSINSFCSSVNPSSLEDXXXXXXX 697
GHLPKS*FLNFSNIAARPLLVKMYRA IKPYSISADDSINSFCSSVN S LED
Sbjct: 594 GHLPKS*FLNFSNIAARPLLVKMYRAWIKPYSISADDSINSFCSSVNTSPLEDSMSRMRS 415
Query: 698 XXXXXYGT*LLRPHRLKXXXXXXXXXXQKNSLPRNVQNHEIQD 826
YGT*LLRP RLK QKNSLPR +QNHEIQD
Sbjct: 414 SA*S*YGT*LLRPQRLKSSCI*SSSISQKNSLPRKLQNHEIQD 286
Score = 128 bits (275), Expect(3) = 4e-046
Identities = 55/77 (71%), Positives = 66/77 (85%)
Frame = +1 / -3
Query: 661 VIIRRLNV*DEIKCIIIIWHLITQTTQVKIILYIVIIDLTKEFIASQCTEP*NPGRVLSL 840
+ IRRLNV*DEIKCIIIIWHLI T+++IILYI+II+LT+EF+ASQ TEP*NP VLS
Sbjct: 451 ITIRRLNV*DEIKCIIIIWHLIA*ATEIEIILYIIIINLTEEFVASQATEP*NPRCVLSF 272
Query: 841 GTTHIRIFTVSFKFLTI 891
T +IRIFTVSF+FL +
Sbjct: 271 RTANIRIFTVSFEFLDV 221
Score = 82.2 bits (173), Expect(2) = 7e-029
Identities = 39/56 (69%), Positives = 40/56 (71%)
Frame = -3 / +3
Query: 884 RNLKLTVKILM*VVPRERTRPGFHGSVHCEAMNSFVRSMMTIYRMILTCVV*VIRC 717
RN KLTVKILM V +ERT GFHGSV CEA NS VR MM IYRMI V * IRC
Sbjct: 228 RNSKLTVKILMLAVLKERTHLGFHGSVACEATNSSVRLMMIIYRMISISVA*AIRC 395
Score = 65.7 bits (137), Expect(2) = 7e-029
Identities = 32/44 (72%), Positives = 33/44 (75%)
Frame = -3 / +3
Query: 650 RSKMN*SSHLQRCCTV*FMHDTF*PARV*LQCWRSSRTTTLVDA 519
RSKMN* SHLQRCC V* MH T * ARV*LQC +SSR L DA
Sbjct: 462 RSKMN*LSHLQRCCMV*SMHGTS*LARV*LQC*KSSRIMILADA 593
Score = 55.6 bits (115), Expect(2) = 7e-067
Identities = 24/28 (85%), Positives = 24/28 (85%)
Frame = +2 / -1
Query: 965 PLEVDGDDLSRCFSSASLMRFRSIPAPP 1048
PLEVDGD LS CFSSASLMRFRSI A P
Sbjct: 147 PLEVDGDGLSVCFSSASLMRFRSISAAP 64
Score = 55.1 bits (114), Expect(3) = 2e-080
Identities = 23/28 (82%), Positives = 24/28 (85%)
Frame = -2 / +2
Query: 1047 GGAGMDRKRIKDALEKHLERSSPSTSRG 964
G A MDRKRIK+ALEKH ER SPSTSRG
Sbjct: 65 GAAEMDRKRIKEALEKHTERPSPSTSRG 148
Score = 52.4 bits (108), Expect(3) = 4e-046
Identities = 21/32 (65%), Positives = 27/32 (84%)
Frame = +1 / -3
Query: 520 ASTKVVVLELLQHCS*TLAG*NVSCMN*TVQH 615
AS K+++LEL HCS*TLA *+V CM+*T+QH
Sbjct: 592 ASAKIIILELF*HCS*TLAS*DVPCMD*TIQH 497
Score = 46.0 bits (94), Expect(2) = 9e-050
Identities = 19/28 (67%), Positives = 21/28 (75%)
Frame = -1 / +1
Query: 1048 RRRRDGPEAHQGRAREAPGEVVAVYLQG 965
RRR DGPEAHQG A E G+ V V+LQG
Sbjct: 64 RRRGDGPEAHQGGAGETHGKAVPVHLQG 147
Score = 42.8 bits (87), Expect(3) = 4e-046
Identities = 18/29 (62%), Positives = 21/29 (72%)
Frame = +1 / -3
Query: 949 LLGHDAPGGRRRRPLQVLLERVLDALPVH 1035
LL PGG R RP +V L+R+LDALPVH
Sbjct: 163 LLPGRPPGGGRGRPFRVFLQRLLDALPVH 77
Score = 29.5 bits (58), Expect(2) = 7e-042
Identities = 13/16 (81%), Positives = 13/16 (81%)
Frame = +3 / -2
Query: 1002 SRARP*CASGPSLRRR 1049
S A P*CASGPS RRR
Sbjct: 110 SPAPP*CASGPSPRRR 63
Score = 28.1 bits (55), Expect(3) = 2e-080
Identities = 10/18 (55%), Positives = 15/18 (83%)
Frame = -2 / +2
Query: 957 SKERERLAAGKLPSSLGK 904
S+E+E LAAGK+ + +GK
Sbjct: 152 SREKEMLAAGKITTQIGK 205
>gb|CA014815.1|CA014815 HT12G23r HT Hordeum vulgare subsp. vulgare cDNA clone HT12G23
5-PRIME, mRNA sequence
Length = 649
Score = 290 bits (627), Expect = 1e-077
Identities = 111/128 (86%), Positives = 121/128 (94%)
Frame = -2 / +2
Query: 822 WISWFCTLRGNEFFCEIDDDYIQDDFNLCGLSNQVPYYDYALDLILDIESSNDDGFTEEQ 643
WISWFC+LRGNEFFCE+DDDYIQDDFNLCGLS QVPYY+YALDLILD+ESS+ D FTEEQ
Sbjct: 266 WISWFCSLRGNEFFCEVDDDYIQDDFNLCGLSGQVPYYEYALDLILDVESSHGDMFTEEQ 445
Query: 642 NELIESSAEMLYGLIHARYILTSKGLAAMLEKFKNYDFGRCPRVYCCGQPCLPAGQSDVP 463
NELIES+AEMLYGLIH RYILTSKGLAAML+K+KNYDFGRCPRV+C GQPCLP GQSD+P
Sbjct: 446 NELIESAAEMLYGLIHVRYILTSKGLAAMLDKYKNYDFGRCPRVHCSGQPCLPVGQSDIP 625
Query: 462 RSSTVKIY 439
RSS VKIY
Sbjct: 626 RSSNVKIY 649
Score = 169 bits (363), Expect(2) = 1e-043
Identities = 78/128 (60%), Positives = 84/128 (65%)
Frame = +2 / -2
Query: 443 IFTVLDLGTSDCPAGRQGWPQQYTLGHLPKS*FLNFSNIAARPLLVKMYRA*IKPYSISA 622
IFT+L+ G SD P GR GWP Q TLGHLPKS*FL SNIAA PLLV++YR *I P SISA
Sbjct: 645 IFTLLERGMSDWPTGRHGWPLQCTLGHLPKS*FLYLSNIAANPLLVRIYRT*INP*SISA 466
Query: 623 DDSINSFCSSVNPSSLEDXXXXXXXXXXXXYGT*LLRPHRLKXXXXXXXXXXQKNSLPRN 802
DSI+SFCSSVN S ED YGT* L P RLK QKNSLPR
Sbjct: 465 ADSISSFCSSVNISPCEDSTSNIRSRAYS*YGT*PLSPQRLKSSCM*SSSTSQKNSLPRK 286
Query: 803 VQNHEIQD 826
+QNHEI D
Sbjct: 285 LQNHEIHD 262
Score = 111 bits (238), Expect = 5e-024
Identities = 64/140 (45%), Positives = 73/140 (52%)
Frame = +3 / -3
Query: 483 LEGRAGHSSTPWGIYQSRSS*TSPTLQLDPCWLKCIVHELNRTASLQMTRLIHFAPR*TR 662
LEG G S I QS SS PTLQ L+ I HE ASLQ+ + +H A *T
Sbjct: 605 LEGMVGRYSALLDICQSHSSCIYPTLQPTLYLLEYIEHESIHKASLQLIQ*VHSALL*TY 426
Query: 663 HH*KTQCLR*DQVHNHNMAPDYSDHTG*NHPVYSHHRSHKRIHCLAMYRTMKSRTCPLPR 842
HH KT+ * Q H HNM D H *N V + H+ H+R HC A YRTMKS L +
Sbjct: 425 HHVKTRHPI*GQEHIHNMELDRLAHRD*NRLVCNRHQLHRRTHCPASYRTMKSTMYLLHQ 246
Query: 843 NHSHQNLHCQFQIPHHQTPP 902
NHS LHCQ I H P
Sbjct: 245 NHSGLILHCQCPILHRTACP 186
Score = 107 bits (228), Expect(2) = 8e-024
Identities = 63/145 (43%), Positives = 92/145 (63%)
Frame = -1 / +1
Query: 874 N*Q*RF*CEWFRGRGHVLDFMVLYIARQ*ILL*DR**LYTG*F*PVWSE*SGAIL*LCT* 695
+*Q*R EWF R +++DFMVL +A Q*+LL* * L+T F +W++ S +IL*+C+*
Sbjct: 214 H*Q*RIRPEWF*WRRYIVDFMVL*LAGQ*VLL*S**RLHTRRFQSLWAKRSSSIL*ICS* 393
Query: 694 SHLRH*VF***RVYRGAK*INRVICRDAVRFNSCTIHFNQQGSSCNVGEVQELRLW*MPQ 515
++ VF * V+R A+* + CRDA+ +SC+I+ N+ CNVG +QEL LW M +
Sbjct: 394 PYIGCRVFTW*YVHRRAE*TY*ISCRDALWIDSCSIYSNK*RVGCNVG*IQEL*LWQMSK 573
Query: 514 GVLLWPALPSSRAIRCS*IEHCEDI 440
L P +PSS + S CE++
Sbjct: 574 SAL*RPTMPSSWPVGHSSF**CENL 648
Score = 80.8 bits (170), Expect(2) = 1e-027
Identities = 32/70 (45%), Positives = 50/70 (71%)
Frame = +1 / -1
Query: 673 RLNV*DEIKCIIIIWHLITQTTQVKIILYIVIIDLTKEFIASQCTEP*NPGRVLSLGTTH 852
RL++ ++K I IIW+L T+++I+LY+++I+ T+E IA Q TEP*NP + S+ TT
Sbjct: 415 RLDIQYKVKSIFIIWNLTA*PTEIEIVLYVIVINFTEELIAPQATEP*NPRCIFSIRTTQ 236
Query: 853 IRIFTVSFKF 882
+ FTVS +F
Sbjct: 235 V*FFTVSVRF 206
Score = 62.9 bits (131), Expect(2) = 1e-027
Identities = 27/59 (45%), Positives = 36/59 (61%)
Frame = +1 / -1
Query: 439 IYLHSARSRNI*LPCWKAGLATAVHPGASTKVVVLELLQHCS*TLAG*NVSCMN*TVQH 615
+ H R+RN+ L WKA LA VH S KV+VL +QHCS *N+S MN +++H
Sbjct: 649 VNFHITRTRNVRLANWKAWLAATVHSWTSAKVIVLVFIQHCSQPFTC*NISNMNQSIKH 473
Score = 28.1 bits (55), Expect(2) = 1e-043
Identities = 11/22 (50%), Positives = 13/22 (59%)
Frame = +1 / -1
Query: 919 RQLPGSEALPLLGHDAPGGRRR 984
R LPG + +PL P GRRR
Sbjct: 145 RLLPGGDPVPLASSGEPPGRRR 80
Score = 23.5 bits (45), Expect(2) = 8e-024
Identities = 10/22 (45%), Positives = 14/22 (63%)
Frame = -1 / +1
Query: 1060 LVLLRRRRDGPEAHQGRAREAP 995
L +LRR R+GP+ + A AP
Sbjct: 91 LGVLRRTREGPDRRREAAGGAP 156
>gb|CA007157.1|CA007157 HU06P10r HU Hordeum vulgare subsp. vulgare cDNA clone HU06P10
5-PRIME, mRNA sequence
Length = 561
Score = 222 bits (480), Expect(3) = 2e-070
Identities = 94/116 (81%), Positives = 96/116 (82%)
Frame = -2 / +3
Query: 900 EVSDGEEFXXXXXXXXXXXXXXXXXSWISWFCTLRGNEFFCEIDDDYIQDDFNLCGLSNQ 721
+VSD EEF SWISWFC+LRGNEFFCEIDDDYIQDDFNLCGLSNQ
Sbjct: 213 KVSDVEEFETDSEDSDVSGSEGEDTSWISWFCSLRGNEFFCEIDDDYIQDDFNLCGLSNQ 392
Query: 720 VPYYDYALDLILDIESSNDDGFTEEQNELIESSAEMLYGLIHARYILTSKGLAAML 553
VPYYDYALDLILDIESSN D FTEEQNELIESSAEMLYGLIHARYILTSKGLAAML
Sbjct: 393 VPYYDYALDLILDIESSNGDVFTEEQNELIESSAEMLYGLIHARYILTSKGLAAML 560
Score = 210 bits (453), Expect(2) = 4e-064
Identities = 83/113 (73%), Positives = 93/113 (82%)
Frame = +3 / -1
Query: 555 TLQLDPCWLKCIVHELNRTASLQMTRLIHFAPR*TRHH*KTQCLR*DQVHNHNMAPDYSD 734
TLQLDPC L+C VH LN TASLQMT+LIHFAP+* HH*KTQCL *DQVHNHNMAPD
Sbjct: 558 TLQLDPC*LRCTVHGLNHTASLQMTQLIHFAPQ*IHHH*KTQCLG*DQVHNHNMAPDCLG 379
Query: 735 HTG*NHPVYSHHRSHKRIHCLAMYRTMKSRTCPLPRNHSHQNLHCQFQIPHHQ 893
H *NHPVY+HH+SH+RI CLA YRTMKS+ CPL +N HQNLHCQF+IP +
Sbjct: 378 HRD*NHPVYNHHQSHRRIRCLASYRTMKSKMCPLLQNR*HQNLHCQFRIPRRR 220
Score = 157 bits (337), Expect(2) = 2e-045
Identities = 80/107 (74%), Positives = 87/107 (81%)
Frame = -1 / +2
Query: 874 N*Q*RF*CEWFRGRGHVLDFMVLYIARQ*ILL*DR**LYTG*F*PVWSE*SGAIL*LCT* 695
N*Q*RF*C F RGH+LDFMVL +ARQ ILL*D **LYTG*F +W + SGAIL*LCT*
Sbjct: 239 N*Q*RF*C*RF*RRGHILDFMVL*LARQRILL*D***LYTG*FQSLWPKQSGAIL*LCT* 418
Query: 694 SHLRH*VF***RVYRGAK*INRVICRDAVRFNSCTIHFNQQGSSCNV 554
SH RH*VF* * ++ GAK*IN VICRDAV FN CT+H N QGSSCNV
Sbjct: 419 SHPRH*VF*W*CIH*GAK*IN*VICRDAVWFNPCTVHLN*QGSSCNV 559
Score = 136 bits (292), Expect(2) = 1e-033
Identities = 63/91 (69%), Positives = 64/91 (70%)
Frame = +2 / -3
Query: 554 NIAARPLLVKMYRA*IKPYSISADDSINSFCSSVNPSSLEDXXXXXXXXXXXXYGT*LLR 733
NIAARPLLVKMYRA IKPYSISADDSINSFCSSVN S LED YGT*LLR
Sbjct: 559 NIAARPLLVKMYRAWIKPYSISADDSINSFCSSVNTSPLEDSMSRMRSSA*S*YGT*LLR 380
Query: 734 PHRLKXXXXXXXXXXQKNSLPRNVQNHEIQD 826
P RLK QKNSLPR +QNHEIQD
Sbjct: 379 PQRLKSSCI*SSSISQKNSLPRKLQNHEIQD 287
Score = 128 bits (275), Expect(3) = 6e-042
Identities = 55/77 (71%), Positives = 66/77 (85%)
Frame = +1 / -2
Query: 661 VIIRRLNV*DEIKCIIIIWHLITQTTQVKIILYIVIIDLTKEFIASQCTEP*NPGRVLSL 840
+ IRRLNV*DEIKCIIIIWHLI T+++IILYI+II+LT+EF+ASQ TEP*NP VLS
Sbjct: 452 ITIRRLNV*DEIKCIIIIWHLIA*ATEIEIILYIIIINLTEEFVASQATEP*NPRCVLSF 273
Query: 841 GTTHIRIFTVSFKFLTI 891
T +IRIFTVSF+FL +
Sbjct: 272 RTANIRIFTVSFEFLDV 222
Score = 82.2 bits (173), Expect(2) = 7e-026
Identities = 39/56 (69%), Positives = 40/56 (71%)
Frame = -3 / +1
Query: 884 RNLKLTVKILM*VVPRERTRPGFHGSVHCEAMNSFVRSMMTIYRMILTCVV*VIRC 717
RN KLTVKILM V +ERT GFHGSV CEA NS VR MM IYRMI V * IRC
Sbjct: 229 RNSKLTVKILMLAVLKERTHLGFHGSVACEATNSSVRLMMIIYRMISISVA*AIRC 396
Score = 55.6 bits (115), Expect(2) = 7e-026
Identities = 26/32 (81%), Positives = 26/32 (81%)
Frame = -3 / +1
Query: 650 RSKMN*SSHLQRCCTV*FMHDTF*PARV*LQC 555
RSKMN* SHLQRCC V* MH T * ARV*LQC
Sbjct: 463 RSKMN*LSHLQRCCMV*SMHGTS*LARV*LQC 558
Score = 55.6 bits (115), Expect(2) = 4e-064
Identities = 24/28 (85%), Positives = 24/28 (85%)
Frame = +2 / -3
Query: 965 PLEVDGDDLSRCFSSASLMRFRSIPAPP 1048
PLEVDGD LS CFSSASLMRFRSI A P
Sbjct: 148 PLEVDGDGLSVCFSSASLMRFRSISAAP 65
Score = 55.1 bits (114), Expect(3) = 2e-070
Identities = 23/28 (82%), Positives = 24/28 (85%)
Frame = -2 / +3
Query: 1047 GGAGMDRKRIKDALEKHLERSSPSTSRG 964
G A MDRKRIK+ALEKH ER SPSTSRG
Sbjct: 66 GAAEMDRKRIKEALEKHTERPSPSTSRG 149
Score = 46.0 bits (94), Expect(2) = 2e-045
Identities = 19/28 (67%), Positives = 21/28 (75%)
Frame = -1 / +2
Query: 1048 RRRRDGPEAHQGRAREAPGEVVAVYLQG 965
RRR DGPEAHQG A E G+ V V+LQG
Sbjct: 65 RRRGDGPEAHQGGAGETHGKAVPVHLQG 148
Score = 42.8 bits (87), Expect(3) = 6e-042
Identities = 18/29 (62%), Positives = 21/29 (72%)
Frame = +1 / -2
Query: 949 LLGHDAPGGRRRRPLQVLLERVLDALPVH 1035
LL PGG R RP +V L+R+LDALPVH
Sbjct: 164 LLPGRPPGGGRGRPFRVFLQRLLDALPVH 78
Score = 38.2 bits (77), Expect(3) = 6e-042
Identities = 15/20 (75%), Positives = 18/20 (90%)
Frame = +1 / -2
Query: 556 HCS*TLAG*NVSCMN*TVQH 615
HCS*TLA *+V CM+*T+QH
Sbjct: 557 HCS*TLAS*DVPCMD*TIQH 498
Score = 29.5 bits (58), Expect(2) = 1e-033
Identities = 13/16 (81%), Positives = 13/16 (81%)
Frame = +3 / -1
Query: 1002 SRARP*CASGPSLRRR 1049
S A P*CASGPS RRR
Sbjct: 111 SPAPP*CASGPSPRRR 64
Score = 28.1 bits (55), Expect(3) = 2e-070
Identities = 10/18 (55%), Positives = 15/18 (83%)
Frame = -2 / +3
Query: 957 SKERERLAAGKLPSSLGK 904
S+E+E LAAGK+ + +GK
Sbjct: 153 SREKEMLAAGKITTQIGK 206
>gb|AV927744.1|AV927744 AV927744 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp.
vulgare cDNA clone basd3h20 3', mRNA sequence
Length = 607
Score = 187 bits (403), Expect(2) = 3e-070
Identities = 71/80 (88%), Positives = 77/80 (96%)
Frame = -2 / -1
Query: 633 IESSAEMLYGLIHARYILTSKGLAAMLEKFKNYDFGRCPRVYCCGQPCLPAGQSDVPRSS 454
+ES+AEMLYGLIHARYILTSKGLAAMLEK+KNYDFGRCPRVYCCGQPCLP GQSD+ RSS
Sbjct: 607 VESAAEMLYGLIHARYILTSKGLAAMLEKYKNYDFGRCPRVYCCGQPCLPIGQSDIHRSS 428
Query: 453 TVKIYCPKCEELNYPRSKYQ 394
TVKIYCPKCE++ YPRSKYQ
Sbjct: 427 TVKIYCPKCEDIYYPRSKYQ 368
Score = 130 bits (279), Expect(2) = 2e-037
Identities = 58/81 (71%), Positives = 63/81 (77%)
Frame = +2 / +3
Query: 389 LPWYLDLG*LSSSHFGQYIFTVLDLGTSDCPAGRQGWPQQYTLGHLPKS*FLNFSNIAAR 568
+ WYL+ G* SSH GQYIFTVLD SDCP GR G PQQ T GH PKS*FL FS+IAA
Sbjct: 363 ISWYLERG**MSSHLGQYIFTVLDR*ISDCPIGRHGCPQQ*TRGHRPKS*FLYFSSIAAN 542
Query: 569 PLLVKMYRA*IKPYSISADDS 631
PLLV+MYRA*I PY+ISA DS
Sbjct: 543 PLLVRMYRA*ISPYNISAADS 605
Score = 98.7 bits (209), Expect(2) = 3e-070
Identities = 36/43 (83%), Positives = 40/43 (93%)
Frame = -2 / -1
Query: 390 NIDGSYFGTTFPHLFLMTYSHLKPQKPSQQYTPRVFGFKLHKP 262
+IDG+Y+GTTFPHLFLMTY HLKPQK SQ+Y PRVFGFKLHKP
Sbjct: 367 DIDGAYYGTTFPHLFLMTYDHLKPQKTSQRYVPRVFGFKLHKP 239
Score = 45.5 bits (93), Expect(2) = 2e-037
Identities = 24/42 (57%), Positives = 27/42 (64%)
Frame = +2 / +3
Query: 263 GL*SLKPKTLGVYCCDGFCGFKCE*VIRKR*GNVVPKYDPSM 388
GL SLKP T G C+ F G + VIRKR*GNVVP PS+
Sbjct: 240 GLWSLKPNTRGT*RCEVFWGLR*SYVIRKR*GNVVP**APSI 365
>gb|CA032718.1|CA032718 HX14A06r HX Hordeum vulgare subsp. vulgare cDNA clone HX14A06
5-PRIME, mRNA sequence
Length = 633
Score = 218 bits (471), Expect(3) = 3e-069
Identities = 92/114 (80%), Positives = 94/114 (82%)
Frame = -2 / +2
Query: 900 EVSDGEEFXXXXXXXXXXXXXXXXXSWISWFCTLRGNEFFCEIDDDYIQDDFNLCGLSNQ 721
+VSD EEF SWISWFC+LRGNEFFCEIDDDYIQDDFNLCGLSNQ
Sbjct: 290 KVSDVEEFETDSEDSDVSGSEGEDTSWISWFCSLRGNEFFCEIDDDYIQDDFNLCGLSNQ 469
Query: 720 VPYYDYALDLILDIESSNDDGFTEEQNELIESSAEMLYGLIHARYILTSKGLAA 559
VPYYDYALDLILDIESSN D FTEEQNELIESSAEMLYGLIHARYILTSKGLAA
Sbjct: 470 VPYYDYALDLILDIESSNGDVFTEEQNELIESSAEMLYGLIHARYILTSKGLAA 631
Score = 208 bits (448), Expect(2) = 2e-063
Identities = 82/112 (73%), Positives = 92/112 (82%)
Frame = +3 / -2
Query: 558 LQLDPCWLKCIVHELNRTASLQMTRLIHFAPR*TRHH*KTQCLR*DQVHNHNMAPDYSDH 737
LQLDPC L+C VH LN TASLQMT+LIHFAP+* HH*KTQCL *DQVHNHNMAPD H
Sbjct: 632 LQLDPC*LRCTVHGLNHTASLQMTQLIHFAPQ*IHHH*KTQCLG*DQVHNHNMAPDCLGH 453
Query: 738 TG*NHPVYSHHRSHKRIHCLAMYRTMKSRTCPLPRNHSHQNLHCQFQIPHHQ 893
*NHPVY+HH+SH+RI CLA YRTMKS+ CPL +N HQNLHCQF+IP +
Sbjct: 452 RD*NHPVYNHHQSHRRIRCLASYRTMKSKMCPLLQNR*HQNLHCQFRIPRRR 297
Score = 155 bits (333), Expect(2) = 8e-045
Identities = 79/106 (74%), Positives = 86/106 (81%)
Frame = -1 / +1
Query: 874 N*Q*RF*CEWFRGRGHVLDFMVLYIARQ*ILL*DR**LYTG*F*PVWSE*SGAIL*LCT* 695
N*Q*RF*C F RGH+LDFMVL +ARQ ILL*D **LYTG*F +W + SGAIL*LCT*
Sbjct: 316 N*Q*RF*C*RF*RRGHILDFMVL*LARQRILL*D***LYTG*FQSLWPKQSGAIL*LCT* 495
Query: 694 SHLRH*VF***RVYRGAK*INRVICRDAVRFNSCTIHFNQQGSSCN 557
SH RH*VF* * ++ GAK*IN VICRDAV FN CT+H N QGSSCN
Sbjct: 496 SHPRH*VF*W*CIH*GAK*IN*VICRDAVWFNPCTVHLN*QGSSCN 633
Score = 133 bits (286), Expect(2) = 1e-032
Identities = 62/90 (68%), Positives = 63/90 (70%)
Frame = +2 / -1
Query: 557 IAARPLLVKMYRA*IKPYSISADDSINSFCSSVNPSSLEDXXXXXXXXXXXXYGT*LLRP 736
IAARPLLVKMYRA IKPYSISADDSINSFCSSVN S LED YGT*LLRP
Sbjct: 633 IAARPLLVKMYRAWIKPYSISADDSINSFCSSVNTSPLEDSMSRMRSSA*S*YGT*LLRP 454
Query: 737 HRLKXXXXXXXXXXQKNSLPRNVQNHEIQD 826
RLK QKNSLPR +QNHEIQD
Sbjct: 453 QRLKSSCI*SSSISQKNSLPRKLQNHEIQD 364
Score = 128 bits (275), Expect(3) = 8e-041
Identities = 55/77 (71%), Positives = 66/77 (85%)
Frame = +1 / -3
Query: 661 VIIRRLNV*DEIKCIIIIWHLITQTTQVKIILYIVIIDLTKEFIASQCTEP*NPGRVLSL 840
+ IRRLNV*DEIKCIIIIWHLI T+++IILYI+II+LT+EF+ASQ TEP*NP VLS
Sbjct: 529 ITIRRLNV*DEIKCIIIIWHLIA*ATEIEIILYIIIINLTEEFVASQATEP*NPRCVLSF 350
Query: 841 GTTHIRIFTVSFKFLTI 891
T +IRIFTVSF+FL +
Sbjct: 349 RTANIRIFTVSFEFLDV 299
Score = 82.2 bits (173), Expect(2) = 1e-024
Identities = 39/56 (69%), Positives = 40/56 (71%)
Frame = -3 / +3
Query: 884 RNLKLTVKILM*VVPRERTRPGFHGSVHCEAMNSFVRSMMTIYRMILTCVV*VIRC 717
RN KLTVKILM V +ERT GFHGSV CEA NS VR MM IYRMI V * IRC
Sbjct: 306 RNSKLTVKILMLAVLKERTHLGFHGSVACEATNSSVRLMMIIYRMISISVA*AIRC 473
Score = 55.6 bits (115), Expect(2) = 2e-063
Identities = 24/28 (85%), Positives = 24/28 (85%)
Frame = +2 / -1
Query: 965 PLEVDGDDLSRCFSSASLMRFRSIPAPP 1048
PLEVDGD LS CFSSASLMRFRSI A P
Sbjct: 225 PLEVDGDGLSVCFSSASLMRFRSISAAP 142
Score = 55.1 bits (114), Expect(3) = 3e-069
Identities = 23/28 (82%), Positives = 24/28 (85%)
Frame = -2 / +2
Query: 1047 GGAGMDRKRIKDALEKHLERSSPSTSRG 964
G A MDRKRIK+ALEKH ER SPSTSRG
Sbjct: 143 GAAEMDRKRIKEALEKHTERPSPSTSRG 226
Score = 51.5 bits (106), Expect(2) = 1e-024
Identities = 25/31 (80%), Positives = 25/31 (80%)
Frame = -3 / +3
Query: 650 RSKMN*SSHLQRCCTV*FMHDTF*PARV*LQ 558
RSKMN* SHLQRCC V* MH T * ARV*LQ
Sbjct: 540 RSKMN*LSHLQRCCMV*SMHGTS*LARV*LQ 632
Score = 46.0 bits (94), Expect(2) = 8e-045
Identities = 19/28 (67%), Positives = 21/28 (75%)
Frame = -1 / +1
Query: 1048 RRRRDGPEAHQGRAREAPGEVVAVYLQG 965
RRR DGPEAHQG A E G+ V V+LQG
Sbjct: 142 RRRGDGPEAHQGGAGETHGKAVPVHLQG 225
Score = 42.8 bits (87), Expect(3) = 8e-041
Identities = 18/29 (62%), Positives = 21/29 (72%)
Frame = +1 / -3
Query: 949 LLGHDAPGGRRRRPLQVLLERVLDALPVH 1035
LL PGG R RP +V L+R+LDALPVH
Sbjct: 241 LLPGRPPGGGRGRPFRVFLQRLLDALPVH 155
Score = 34.5 bits (69), Expect(3) = 8e-041
Identities = 14/19 (73%), Positives = 17/19 (89%)
Frame = +1 / -3
Query: 559 CS*TLAG*NVSCMN*TVQH 615
CS*TLA *+V CM+*T+QH
Sbjct: 631 CS*TLAS*DVPCMD*TIQH 575
Score = 29.5 bits (58), Expect(2) = 1e-032
Identities = 13/16 (81%), Positives = 13/16 (81%)
Frame = +3 / -2
Query: 1002 SRARP*CASGPSLRRR 1049
S A P*CASGPS RRR
Sbjct: 188 SPAPP*CASGPSPRRR 141
Score = 28.1 bits (55), Expect(3) = 3e-069
Identities = 10/18 (55%), Positives = 15/18 (83%)
Frame = -2 / +2
Query: 957 SKERERLAAGKLPSSLGK 904
S+E+E LAAGK+ + +GK
Sbjct: 230 SREKEMLAAGKITTQIGK 283
>gb|BM816745.1|BM816745 HB02D10_T3.ab1 HB Hordeum vulgare subsp. vulgare cDNA clone
HB02D10_T3.ab1 similar to Protein kinase,, mRNA sequence
Length = 848
Score = 213 bits (460), Expect(3) = 6e-069
Identities = 83/96 (86%), Positives = 90/96 (93%)
Frame = -2 / +1
Query: 672 SNDDGFTEEQNELIESSAEMLYGLIHARYILTSKGLAAMLEKFKNYDFGRCPRVYCCGQP 493
S D FTEEQNEL+ES+AEMLYGLIHARYILTSKGLAAMLEK+KNYDFGRCPRVYCCGQP
Sbjct: 283 SEGDIFTEEQNELVESAAEMLYGLIHARYILTSKGLAAMLEKYKNYDFGRCPRVYCCGQP 462
Query: 492 CLPAGQSDVPRSSTVKIYCPKCEELNYPRSKYQGNI 385
CLP GQSD+ RSSTVKIYCPKCE++ YPRSKYQG+I
Sbjct: 463 CLPIGQSDIHRSSTVKIYCPKCEDIYYPRSKYQGSI 570
Score = 151 bits (324), Expect(2) = 3e-042
Identities = 68/96 (70%), Positives = 74/96 (77%)
Frame = +2 / -1
Query: 386 MLPWYLDLG*LSSSHFGQYIFTVLDLGTSDCPAGRQGWPQQYTLGHLPKS*FLNFSNIAA 565
+LPWYL+ G* SSH GQYIFTVLD SDCP GR G PQQ T GH PKS*FL FS+IAA
Sbjct: 569 ILPWYLERG**MSSHLGQYIFTVLDR*ISDCPIGRHGCPQQ*TRGHRPKS*FLYFSSIAA 390
Query: 566 RPLLVKMYRA*IKPYSISADDSINSFCSSVNPSSLE 673
PLLV+MYRA*I PY+ISA DS +SFCSSV S E
Sbjct: 389 NPLLVRMYRA*ISPYNISAADSTSSFCSSVKISPSE 282
Score = 95.5 bits (202), Expect(2) = 3e-024
Identities = 44/77 (57%), Positives = 51/77 (66%)
Frame = +1 / -3
Query: 385 DVALVLGSWIVKFFAFRTIYLHSARSRNI*LPCWKAGLATAVHPGASTKVVVLELLQHCS 564
D ALV +WIV FA RT+YLH RS NI*L W A L+TA++ S+KVVVL LQH S
Sbjct: 570 DTALVFRTWIVDVFALRTVYLHCTRSVNI*LSNW*AWLSTAINTWTSSKVVVLVFLQHSS 391
Query: 565 *TLAG*NVSCMN*TVQH 615
G NVSCMN +QH
Sbjct: 390 QPFTGQNVSCMNQPIQH 340
Score = 94.1 bits (199), Expect(2) = 3e-022
Identities = 46/89 (51%), Positives = 58/89 (65%)
Frame = -3 / +2
Query: 650 RSKMN*SSHLQRCCTV*FMHDTF*PARV*LQCWRSSRTTTLVDAPGCTAVASPAFQQGNQ 471
++KM+* + L RCC *FMHDTF*P + L CWR++RTTTL D AV + A+Q NQ
Sbjct: 305 KNKMS*WNQLLRCCMG*FMHDTF*PVKGWLLCWRNTRTTTLDDVHVFIAVDNHAYQLDNQ 484
Query: 470 MFLDRAL*RYIVRNAKNLTIQDPSTKATS 384
+F D *RY V +AK TI +TKA S
Sbjct: 485 IFTDLVQ*RYTVLSAKTSTIHVLNTKAVS 571
Score = 46.9 bits (96), Expect(3) = 6e-069
Identities = 17/24 (70%), Positives = 18/24 (75%)
Frame = -2 / +2
Query: 384 DGSYFGTTFPHLFLMTYSHLKPQK 313
DG+YFGT F H FL T HLKPQK
Sbjct: 740 DGAYFGTNFXHFFLKTXDHLKPQK 811
Score = 45.5 bits (93), Expect(3) = 6e-069
Identities = 17/26 (65%), Positives = 23/26 (88%)
Frame = -2 / +1
Query: 1047 GGAGMDRKRIKDALEKHLERSSPSTS 970
GGAG+DRKRI +AL+KHLE+++ S S
Sbjct: 127 GGAGLDRKRISEALDKHLEKAAASPS 204
Score = 44.6 bits (91), Expect(2) = 3e-042
Identities = 19/27 (70%), Positives = 20/27 (74%)
Frame = +2 / -1
Query: 968 LEVDGDDLSRCFSSASLMRFRSIPAPP 1048
+E D SRC SSASLMRFRS PAPP
Sbjct: 206 VEGDAAAFSRCLSSASLMRFRSSPAPP 126
Score = 40.0 bits (81), Expect(2) = 3e-024
Identities = 17/23 (73%), Positives = 18/23 (78%)
Frame = +1 / -3
Query: 970 GGRRRRPLQVLLERVLDALPVHP 1038
GGRR R LQVL+ER DALPV P
Sbjct: 204 GGRRGRLLQVLIERFADALPVQP 136
Score = 34.5 bits (69), Expect(2) = 3e-022
Identities = 18/33 (54%), Positives = 19/33 (57%)
Frame = -1 / +3
Query: 1048 RRRRDGPEAHQGRAREAPGEVVAVYLQGRRVQG 950
RR GPEAHQ AR APGE V L R+ G
Sbjct: 126 RRGGAGPEAHQRSAR*APGEGGRVALHVERLGG 224
>gb|BQ465233.1|BQ465233 HU03A07r HU Hordeum vulgare subsp. vulgare cDNA clone HU03A07
5-PRIME, mRNA sequence
Length = 552
Score = 260 bits (563), Expect(2) = 7e-069
Identities = 99/113 (87%), Positives = 108/113 (95%)
Frame = -2 / +2
Query: 822 WISWFCTLRGNEFFCEIDDDYIQDDFNLCGLSNQVPYYDYALDLILDIESSNDDGFTEEQ 643
WISWFC+LRGNEFFCE+DDDYIQDDFNLCGLS QVPYY+YALDLILD+ESS+ D FTEEQ
Sbjct: 212 WISWFCSLRGNEFFCEVDDDYIQDDFNLCGLSGQVPYYEYALDLILDVESSHGDMFTEEQ 391
Query: 642 NELIESSAEMLYGLIHARYILTSKGLAAMLEKFKNYDFGRCPRVYCCGQPCLP 484
NELIES+AEMLYGLIH RYILTSKGLAAML+K+KNYDFGRCPRV+C GQPCLP
Sbjct: 392 NELIESAAEMLYGLIHVRYILTSKGLAAMLDKYKNYDFGRCPRVHCSGQPCLP 550
Score = 150 bits (323), Expect(2) = 4e-038
Identities = 70/114 (61%), Positives = 74/114 (64%)
Frame = +2 / -1
Query: 485 GRQGWPQQYTLGHLPKS*FLNFSNIAARPLLVKMYRA*IKPYSISADDSINSFCSSVNPS 664
GR GWP Q TLGHLPKS*FL SNIAA PLLV++YR *I P SISA DSI+SFCSSVN S
Sbjct: 549 GRHGWPLQCTLGHLPKS*FLYLSNIAANPLLVRIYRT*INP*SISAADSISSFCSSVNIS 370
Query: 665 SLEDXXXXXXXXXXXXYGT*LLRPHRLKXXXXXXXXXXQKNSLPRNVQNHEIQD 826
ED YGT* L P RLK QKNSLPR +QNHEI D
Sbjct: 369 PCEDSTSNIRSRAYS*YGT*PLSPQRLKSSCM*SSSTSQKNSLPRKLQNHEIHD 208
Score = 111 bits (238), Expect = 5e-024
Identities = 64/140 (45%), Positives = 73/140 (52%)
Frame = +3 / -2
Query: 483 LEGRAGHSSTPWGIYQSRSS*TSPTLQLDPCWLKCIVHELNRTASLQMTRLIHFAPR*TR 662
LEG G S I QS SS PTLQ L+ I HE ASLQ+ + +H A *T
Sbjct: 551 LEGMVGRYSALLDICQSHSSCIYPTLQPTLYLLEYIEHESIHKASLQLIQ*VHSALL*TY 372
Query: 663 HH*KTQCLR*DQVHNHNMAPDYSDHTG*NHPVYSHHRSHKRIHCLAMYRTMKSRTCPLPR 842
HH KT+ * Q H HNM D H *N V + H+ H+R HC A YRTMKS L +
Sbjct: 371 HHVKTRHPI*GQEHIHNMELDRLAHRD*NRLVCNRHQLHRRTHCPASYRTMKSTMYLLHQ 192
Query: 843 NHSHQNLHCQFQIPHHQTPP 902
NHS LHCQ I H P
Sbjct: 191 NHSGLILHCQCPILHRTACP 132
Score = 105 bits (225), Expect = 3e-022
Identities = 60/131 (45%), Positives = 86/131 (65%)
Frame = -1 / +1
Query: 874 N*Q*RF*CEWFRGRGHVLDFMVLYIARQ*ILL*DR**LYTG*F*PVWSE*SGAIL*LCT* 695
+*Q*R EWF R +++DFMVL +A Q*+LL* * L+T F +W++ S +IL*+C+*
Sbjct: 160 H*Q*RIRPEWF*WRRYIVDFMVL*LAGQ*VLL*S**RLHTRRFQSLWAKRSSSIL*ICS* 339
Query: 694 SHLRH*VF***RVYRGAK*INRVICRDAVRFNSCTIHFNQQGSSCNVGEVQELRLW*MPQ 515
++ VF * V+R A+* + CRDA+ +SC+I+ N+ CNVG +QEL LW M +
Sbjct: 340 PYIGCRVFTW*YVHRRAE*TY*ISCRDALWIDSCSIYSNK*RVGCNVG*IQEL*LWQMSK 519
Query: 514 GVLLWPALPSS 482
L P +PSS
Sbjct: 520 SAL*RPTMPSS 552
Score = 80.8 bits (170), Expect(2) = 2e-024
Identities = 32/70 (45%), Positives = 50/70 (71%)
Frame = +1 / -3
Query: 673 RLNV*DEIKCIIIIWHLITQTTQVKIILYIVIIDLTKEFIASQCTEP*NPGRVLSLGTTH 852
RL++ ++K I IIW+L T+++I+LY+++I+ T+E IA Q TEP*NP + S+ TT
Sbjct: 361 RLDIQYKVKSIFIIWNLTA*PTEIEIVLYVIVINFTEELIAPQATEP*NPRCIFSIRTTQ 182
Query: 853 IRIFTVSFKF 882
+ FTVS +F
Sbjct: 181 V*FFTVSVRF 152
Score = 52.4 bits (108), Expect(2) = 2e-024
Identities = 22/44 (50%), Positives = 28/44 (63%)
Frame = +1 / -3
Query: 484 WKAGLATAVHPGASTKVVVLELLQHCS*TLAG*NVSCMN*TVQH 615
WKA LA VH S KV+VL +QHCS *N+S MN +++H
Sbjct: 550 WKAWLAATVHSWTSAKVIVLVFIQHCSQPFTC*NISNMNQSIKH 419
Score = 28.1 bits (55), Expect(2) = 4e-038
Identities = 11/22 (50%), Positives = 13/22 (59%)
Frame = +1 / -3
Query: 919 RQLPGSEALPLLGHDAPGGRRR 984
R LPG + +PL P GRRR
Sbjct: 91 RLLPGGDPVPLASSGEPPGRRR 26
Score = 23.5 bits (45), Expect(2) = 7e-069
Identities = 10/22 (45%), Positives = 14/22 (63%)
Frame = -1 / +1
Query: 1060 LVLLRRRRDGPEAHQGRAREAP 995
L +LRR R+GP+ + A AP
Sbjct: 37 LGVLRRTREGPDRRREAAGGAP 102
>gb|BQ467754.1|BQ467754 HS04M10r HS Hordeum vulgare subsp. vulgare cDNA clone HS04M10
5-PRIME, mRNA sequence
Length = 659
Score = 215 bits (463), Expect(3) = 4e-068
Identities = 90/112 (80%), Positives = 92/112 (82%)
Frame = -2 / +2
Query: 900 EVSDGEEFXXXXXXXXXXXXXXXXXSWISWFCTLRGNEFFCEIDDDYIQDDFNLCGLSNQ 721
+VSD EEF SWISWFC+LRGNEFFCEIDDDYIQDDFNLCGLSNQ
Sbjct: 323 KVSDVEEFETDSEDSDVSGSEGEDTSWISWFCSLRGNEFFCEIDDDYIQDDFNLCGLSNQ 502
Query: 720 VPYYDYALDLILDIESSNDDGFTEEQNELIESSAEMLYGLIHARYILTSKGL 565
VPYYDYALDLILDIESSN D FTEEQNELIESSAEMLYGLIHARYILTSKGL
Sbjct: 503 VPYYDYALDLILDIESSNGDVFTEEQNELIESSAEMLYGLIHARYILTSKGL 658
Score = 204 bits (439), Expect(2) = 3e-062
Identities = 80/110 (72%), Positives = 90/110 (81%)
Frame = +3 / -1
Query: 564 LDPCWLKCIVHELNRTASLQMTRLIHFAPR*TRHH*KTQCLR*DQVHNHNMAPDYSDHTG 743
LDPC L+C VH LN TASLQMT+LIHFAP+* HH*KTQCL *DQVHNHNMAPD H
Sbjct: 659 LDPC*LRCTVHGLNHTASLQMTQLIHFAPQ*IHHH*KTQCLG*DQVHNHNMAPDCLGHRD 480
Query: 744 *NHPVYSHHRSHKRIHCLAMYRTMKSRTCPLPRNHSHQNLHCQFQIPHHQ 893
*NHPVY+HH+SH+RI CLA YRTMKS+ CPL +N HQNLHCQF+IP +
Sbjct: 479 *NHPVYNHHQSHRRIRCLASYRTMKSKMCPLLQNR*HQNLHCQFRIPRRR 330
Score = 146 bits (314), Expect(2) = 3e-042
Identities = 76/103 (73%), Positives = 83/103 (80%)
Frame = -1 / +1
Query: 874 N*Q*RF*CEWFRGRGHVLDFMVLYIARQ*ILL*DR**LYTG*F*PVWSE*SGAIL*LCT* 695
N*Q*RF*C F RGH+LDFMVL +ARQ ILL*D **LYTG*F +W + SGAIL*LCT*
Sbjct: 349 N*Q*RF*C*RF*RRGHILDFMVL*LARQRILL*D***LYTG*FQSLWPKQSGAIL*LCT* 528
Query: 694 SHLRH*VF***RVYRGAK*INRVICRDAVRFNSCTIHFNQQGS 566
SH RH*VF* * ++ GAK*IN VICRDAV FN CT+H N QGS
Sbjct: 529 SHPRH*VF*W*CIH*GAK*IN*VICRDAVWFNPCTVHLN*QGS 657
Score = 128 bits (275), Expect(3) = 4e-039
Identities = 55/77 (71%), Positives = 66/77 (85%)
Frame = +1 / -2
Query: 661 VIIRRLNV*DEIKCIIIIWHLITQTTQVKIILYIVIIDLTKEFIASQCTEP*NPGRVLSL 840
+ IRRLNV*DEIKCIIIIWHLI T+++IILYI+II+LT+EF+ASQ TEP*NP VLS
Sbjct: 562 ITIRRLNV*DEIKCIIIIWHLIA*ATEIEIILYIIIINLTEEFVASQATEP*NPRCVLSF 383
Query: 841 GTTHIRIFTVSFKFLTI 891
T +IRIFTVSF+FL +
Sbjct: 382 RTANIRIFTVSFEFLDV 332
Score = 128 bits (274), Expect(2) = 5e-031
Identities = 59/87 (67%), Positives = 60/87 (68%)
Frame = +2 / -3
Query: 566 RPLLVKMYRA*IKPYSISADDSINSFCSSVNPSSLEDXXXXXXXXXXXXYGT*LLRPHRL 745
RPLLVKMYRA IKPYSISADDSINSFCSSVN S LED YGT*LLRP RL
Sbjct: 657 RPLLVKMYRAWIKPYSISADDSINSFCSSVNTSPLEDSMSRMRSSA*S*YGT*LLRPQRL 478
Query: 746 KXXXXXXXXXXQKNSLPRNVQNHEIQD 826
K QKNSLPR +QNHEIQD
Sbjct: 477 KSSCI*SSSISQKNSLPRKLQNHEIQD 397
Score = 82.2 bits (173), Expect(2) = 2e-023
Identities = 39/56 (69%), Positives = 40/56 (71%)
Frame = -3 / +3
Query: 884 RNLKLTVKILM*VVPRERTRPGFHGSVHCEAMNSFVRSMMTIYRMILTCVV*VIRC 717
RN KLTVKILM V +ERT GFHGSV CEA NS VR MM IYRMI V * IRC
Sbjct: 339 RNSKLTVKILMLAVLKERTHLGFHGSVACEATNSSVRLMMIIYRMISISVA*AIRC 506
Score = 55.6 bits (115), Expect(2) = 3e-062
Identities = 24/28 (85%), Positives = 24/28 (85%)
Frame = +2 / -3
Query: 965 PLEVDGDDLSRCFSSASLMRFRSIPAPP 1048
PLEVDGD LS CFSSASLMRFRSI A P
Sbjct: 258 PLEVDGDGLSVCFSSASLMRFRSISAAP 175
Score = 55.1 bits (114), Expect(3) = 4e-068
Identities = 23/28 (82%), Positives = 24/28 (85%)
Frame = -2 / +2
Query: 1047 GGAGMDRKRIKDALEKHLERSSPSTSRG 964
G A MDRKRIK+ALEKH ER SPSTSRG
Sbjct: 176 GAAEMDRKRIKEALEKHTERPSPSTSRG 259
Score = 47.3 bits (97), Expect(2) = 2e-023
Identities = 23/29 (79%), Positives = 23/29 (79%)
Frame = -3 / +3
Query: 650 RSKMN*SSHLQRCCTV*FMHDTF*PARV* 564
RSKMN* SHLQRCC V* MH T * ARV*
Sbjct: 573 RSKMN*LSHLQRCCMV*SMHGTS*LARV* 659
Score = 46.0 bits (94), Expect(2) = 3e-042
Identities = 19/28 (67%), Positives = 21/28 (75%)
Frame = -1 / +1
Query: 1048 RRRRDGPEAHQGRAREAPGEVVAVYLQG 965
RRR DGPEAHQG A E G+ V V+LQG
Sbjct: 175 RRRGDGPEAHQGGAGETHGKAVPVHLQG 258
Score = 42.8 bits (87), Expect(3) = 4e-039
Identities = 18/29 (62%), Positives = 21/29 (72%)
Frame = +1 / -2
Query: 949 LLGHDAPGGRRRRPLQVLLERVLDALPVH 1035
LL PGG R RP +V L+R+LDALPVH
Sbjct: 274 LLPGRPPGGGRGRPFRVFLQRLLDALPVH 188
Score = 29.5 bits (58), Expect(2) = 5e-031
Identities = 13/16 (81%), Positives = 13/16 (81%)
Frame = +3 / -1
Query: 1002 SRARP*CASGPSLRRR 1049
S A P*CASGPS RRR
Sbjct: 221 SPAPP*CASGPSPRRR 174
Score = 28.6 bits (56), Expect(3) = 4e-039
Identities = 12/17 (70%), Positives = 15/17 (88%)
Frame = +1 / -2
Query: 565 *TLAG*NVSCMN*TVQH 615
*TLA *+V CM+*T+QH
Sbjct: 658 *TLAS*DVPCMD*TIQH 608
Score = 28.1 bits (55), Expect(3) = 4e-068
Identities = 10/18 (55%), Positives = 15/18 (83%)
Frame = -2 / +2
Query: 957 SKERERLAAGKLPSSLGK 904
S+E+E LAAGK+ + +GK
Sbjct: 263 SREKEMLAAGKITTQIGK 316
>gb|BU989668.1|BU989668 HF22F24r HF Hordeum vulgare subsp. vulgare cDNA clone HF22F24
5-PRIME, mRNA sequence
Length = 486
Score = 213 bits (459), Expect(3) = 7e-066
Identities = 89/111 (80%), Positives = 91/111 (81%)
Frame = -2 / +3
Query: 900 EVSDGEEFXXXXXXXXXXXXXXXXXSWISWFCTLRGNEFFCEIDDDYIQDDFNLCGLSNQ 721
+VSD EEF SWISWFC+LRGNEFFCEIDDDYIQDDFNLCGLSNQ
Sbjct: 153 KVSDVEEFETDSEDSDVSGSEGEDTSWISWFCSLRGNEFFCEIDDDYIQDDFNLCGLSNQ 332
Query: 720 VPYYDYALDLILDIESSNDDGFTEEQNELIESSAEMLYGLIHARYILTSKG 568
VPYYDYALDLILDIESSN D FTEEQNELIESSAEMLYGLIHARYILTSKG
Sbjct: 333 VPYYDYALDLILDIESSNGDVFTEEQNELIESSAEMLYGLIHARYILTSKG 485
Score = 202 bits (435), Expect(2) = 3e-060
Identities = 79/109 (72%), Positives = 89/109 (81%)
Frame = +3 / -1
Query: 567 DPCWLKCIVHELNRTASLQMTRLIHFAPR*TRHH*KTQCLR*DQVHNHNMAPDYSDHTG* 746
DPC L+C VH LN TASLQMT+LIHFAP+* HH*KTQCL *DQVHNHNMAPD H *
Sbjct: 486 DPC*LRCTVHGLNHTASLQMTQLIHFAPQ*IHHH*KTQCLG*DQVHNHNMAPDCLGHRD* 307
Query: 747 NHPVYSHHRSHKRIHCLAMYRTMKSRTCPLPRNHSHQNLHCQFQIPHHQ 893
NHPVY+HH+SH+RI CLA YRTMKS+ CPL +N HQNLHCQF+IP +
Sbjct: 306 NHPVYNHHQSHRRIRCLASYRTMKSKMCPLLQNR*HQNLHCQFRIPRRR 160
Score = 144 bits (310), Expect(2) = 4e-039
Identities = 75/102 (73%), Positives = 82/102 (80%)
Frame = -1 / +2
Query: 874 N*Q*RF*CEWFRGRGHVLDFMVLYIARQ*ILL*DR**LYTG*F*PVWSE*SGAIL*LCT* 695
N*Q*RF*C F RGH+LDFMVL +ARQ ILL*D **LYTG*F +W + SGAIL*LCT*
Sbjct: 179 N*Q*RF*C*RF*RRGHILDFMVL*LARQRILL*D***LYTG*FQSLWPKQSGAIL*LCT* 358
Query: 694 SHLRH*VF***RVYRGAK*INRVICRDAVRFNSCTIHFNQQG 569
SH RH*VF* * ++ GAK*IN VICRDAV FN CT+H N QG
Sbjct: 359 SHPRH*VF*W*CIH*GAK*IN*VICRDAVWFNPCTVHLN*QG 484
Score = 128 bits (275), Expect(3) = 7e-038
Identities = 55/77 (71%), Positives = 66/77 (85%)
Frame = +1 / -2
Query: 661 VIIRRLNV*DEIKCIIIIWHLITQTTQVKIILYIVIIDLTKEFIASQCTEP*NPGRVLSL 840
+ IRRLNV*DEIKCIIIIWHLI T+++IILYI+II+LT+EF+ASQ TEP*NP VLS
Sbjct: 392 ITIRRLNV*DEIKCIIIIWHLIA*ATEIEIILYIIIINLTEEFVASQATEP*NPRCVLSF 213
Query: 841 GTTHIRIFTVSFKFLTI 891
T +IRIFTVSF+FL +
Sbjct: 212 RTANIRIFTVSFEFLDV 162
Score = 126 bits (269), Expect(2) = 2e-028
Identities = 58/86 (67%), Positives = 59/86 (68%)
Frame = +2 / -3
Query: 569 PLLVKMYRA*IKPYSISADDSINSFCSSVNPSSLEDXXXXXXXXXXXXYGT*LLRPHRLK 748
PLLVKMYRA IKPYSISADDSINSFCSSVN S LED YGT*LLRP RLK
Sbjct: 484 PLLVKMYRAWIKPYSISADDSINSFCSSVNTSPLEDSMSRMRSSA*S*YGT*LLRPQRLK 305
Query: 749 XXXXXXXXXXQKNSLPRNVQNHEIQD 826
QKNSLPR +QNHEIQD
Sbjct: 304 SSCI*SSSISQKNSLPRKLQNHEIQD 227
Score = 82.2 bits (173), Expect(2) = 3e-023
Identities = 39/56 (69%), Positives = 40/56 (71%)
Frame = -3 / +1
Query: 884 RNLKLTVKILM*VVPRERTRPGFHGSVHCEAMNSFVRSMMTIYRMILTCVV*VIRC 717
RN KLTVKILM V +ERT GFHGSV CEA NS VR MM IYRMI V * IRC
Sbjct: 169 RNSKLTVKILMLAVLKERTHLGFHGSVACEATNSSVRLMMIIYRMISISVA*AIRC 336
Score = 51.0 bits (105), Expect(2) = 3e-060
Identities = 21/24 (87%), Positives = 22/24 (91%)
Frame = +2 / -3
Query: 965 PLEVDGDDLSRCFSSASLMRFRSI 1036
PLEVDGD LS CFSSASLMRFRS+
Sbjct: 88 PLEVDGDGLSVCFSSASLMRFRSV 17
Score = 49.2 bits (101), Expect(3) = 7e-066
Identities = 20/23 (86%), Positives = 21/23 (91%)
Frame = -2 / +3
Query: 1032 DRKRIKDALEKHLERSSPSTSRG 964
DRKRIK+ALEKH ER SPSTSRG
Sbjct: 21 DRKRIKEALEKHTERPSPSTSRG 89
Score = 46.9 bits (96), Expect(2) = 3e-023
Identities = 22/28 (78%), Positives = 22/28 (78%)
Frame = -3 / +1
Query: 650 RSKMN*SSHLQRCCTV*FMHDTF*PARV 567
RSKMN* SHLQRCC V* MH T * ARV
Sbjct: 403 RSKMN*LSHLQRCCMV*SMHGTS*LARV 486
Score = 39.1 bits (79), Expect(3) = 7e-038
Identities = 17/28 (60%), Positives = 20/28 (71%)
Frame = +1 / -2
Query: 949 LLGHDAPGGRRRRPLQVLLERVLDALPV 1032
LL PGG R RP +V L+R+LDALPV
Sbjct: 104 LLPGRPPGGGRGRPFRVFLQRLLDALPV 21
Score = 37.3 bits (75), Expect(2) = 4e-039
Identities = 15/23 (65%), Positives = 17/23 (73%)
Frame = -1 / +2
Query: 1033 GPEAHQGRAREAPGEVVAVYLQG 965
GPEAHQG A E G+ V V+LQG
Sbjct: 20 GPEAHQGGAGETHGKAVPVHLQG 88
Score = 28.1 bits (55), Expect(3) = 7e-066
Identities = 10/18 (55%), Positives = 15/18 (83%)
Frame = -2 / +3
Query: 957 SKERERLAAGKLPSSLGK 904
S+E+E LAAGK+ + +GK
Sbjct: 93 SREKEMLAAGKITTQIGK 146
Score = 28.1 bits (55), Expect(3) = 7e-038
Identities = 11/16 (68%), Positives = 14/16 (87%)
Frame = +1 / -2
Query: 568 TLAG*NVSCMN*TVQH 615
TLA *+V CM+*T+QH
Sbjct: 485 TLAS*DVPCMD*TIQH 438
Score = 22.1 bits (42), Expect(2) = 2e-028
Identities = 9/11 (81%), Positives = 9/11 (81%)
Frame = +3 / -1
Query: 1002 SRARP*CASGP 1034
S A P*CASGP
Sbjct: 51 SPAPP*CASGP 19
>gb|BU998184.1|BU998184 HI10E02r HI Hordeum vulgare subsp. vulgare cDNA clone HI10E02
5-PRIME, mRNA sequence
Length = 587
Score = 202 bits (435), Expect(3) = 2e-064
Identities = 84/106 (79%), Positives = 86/106 (81%)
Frame = -2 / +2
Query: 900 EVSDGEEFXXXXXXXXXXXXXXXXXSWISWFCTLRGNEFFCEIDDDYIQDDFNLCGLSNQ 721
+VSD EEF SWISWFC+LRGNEFFCEIDDDYIQDDFNLCGLSNQ
Sbjct: 269 KVSDVEEFETDSEDSDVSGSEGEDTSWISWFCSLRGNEFFCEIDDDYIQDDFNLCGLSNQ 448
Query: 720 VPYYDYALDLILDIESSNDDGFTEEQNELIESSAEMLYGLIHARYI 583
VPYYDYALDLILDIESSN D FTEEQNELIESSAEMLYGLIHARYI
Sbjct: 449 VPYYDYALDLILDIESSNGDVFTEEQNELIESSAEMLYGLIHARYI 586
Score = 192 bits (413), Expect(2) = 1e-058
Identities = 75/104 (72%), Positives = 85/104 (81%)
Frame = +3 / -1
Query: 582 KCIVHELNRTASLQMTRLIHFAPR*TRHH*KTQCLR*DQVHNHNMAPDYSDHTG*NHPVY 761
+C VH LN TASLQMT+LIHFAP+* HH*KTQCL *DQVHNHNMAPD H *NHPVY
Sbjct: 587 RCTVHGLNHTASLQMTQLIHFAPQ*IHHH*KTQCLG*DQVHNHNMAPDCLGHRD*NHPVY 408
Query: 762 SHHRSHKRIHCLAMYRTMKSRTCPLPRNHSHQNLHCQFQIPHHQ 893
+HH+SH+RI CLA YRTMKS+ CPL +N HQNLHCQF+IP +
Sbjct: 407 NHHQSHRRIRCLASYRTMKSKMCPLLQNR*HQNLHCQFRIPRRR 276
Score = 138 bits (297), Expect(2) = 6e-040
Identities = 72/97 (74%), Positives = 79/97 (81%)
Frame = -1 / +1
Query: 874 N*Q*RF*CEWFRGRGHVLDFMVLYIARQ*ILL*DR**LYTG*F*PVWSE*SGAIL*LCT* 695
N*Q*RF*C F RGH+LDFMVL +ARQ ILL*D **LYTG*F +W + SGAIL*LCT*
Sbjct: 295 N*Q*RF*C*RF*RRGHILDFMVL*LARQRILL*D***LYTG*FQSLWPKQSGAIL*LCT* 474
Query: 694 SHLRH*VF***RVYRGAK*INRVICRDAVRFNSCTIH 584
SH RH*VF* * ++ GAK*IN VICRDAV FN CT+H
Sbjct: 475 SHPRH*VF*W*CIH*GAK*IN*VICRDAVWFNPCTVH 585
Score = 128 bits (275), Expect(2) = 6e-036
Identities = 55/77 (71%), Positives = 66/77 (85%)
Frame = +1 / -2
Query: 661 VIIRRLNV*DEIKCIIIIWHLITQTTQVKIILYIVIIDLTKEFIASQCTEP*NPGRVLSL 840
+ IRRLNV*DEIKCIIIIWHLI T+++IILYI+II+LT+EF+ASQ TEP*NP VLS
Sbjct: 508 ITIRRLNV*DEIKCIIIIWHLIA*ATEIEIILYIIIINLTEEFVASQATEP*NPRCVLSF 329
Query: 841 GTTHIRIFTVSFKFLTI 891
T +IRIFTVSF+FL +
Sbjct: 328 RTANIRIFTVSFEFLDV 278
Score = 115 bits (245), Expect(2) = 4e-027
Identities = 53/81 (65%), Positives = 54/81 (66%)
Frame = +2 / -3
Query: 584 MYRA*IKPYSISADDSINSFCSSVNPSSLEDXXXXXXXXXXXXYGT*LLRPHRLKXXXXX 763
MYRA IKPYSISADDSINSFCSSVN S LED YGT*LLRP RLK
Sbjct: 585 MYRAWIKPYSISADDSINSFCSSVNTSPLEDSMSRMRSSA*S*YGT*LLRPQRLKSSCI* 406
Query: 764 XXXXXQKNSLPRNVQNHEIQD 826
QKNSLPR +QNHEIQD
Sbjct: 405 SSSISQKNSLPRKLQNHEIQD 343
Score = 82.2 bits (173), Expect(2) = 5e-022
Identities = 39/56 (69%), Positives = 40/56 (71%)
Frame = -3 / +3
Query: 884 RNLKLTVKILM*VVPRERTRPGFHGSVHCEAMNSFVRSMMTIYRMILTCVV*VIRC 717
RN KLTVKILM V +ERT GFHGSV CEA NS VR MM IYRMI V * IRC
Sbjct: 285 RNSKLTVKILMLAVLKERTHLGFHGSVACEATNSSVRLMMIIYRMISISVA*AIRC 452
Score = 55.6 bits (115), Expect(2) = 1e-058
Identities = 24/28 (85%), Positives = 24/28 (85%)
Frame = +2 / -3
Query: 965 PLEVDGDDLSRCFSSASLMRFRSIPAPP 1048
PLEVDGD LS CFSSASLMRFRSI A P
Sbjct: 204 PLEVDGDGLSVCFSSASLMRFRSISAAP 121
Score = 55.1 bits (114), Expect(3) = 2e-064
Identities = 23/28 (82%), Positives = 24/28 (85%)
Frame = -2 / +2
Query: 1047 GGAGMDRKRIKDALEKHLERSSPSTSRG 964
G A MDRKRIK+ALEKH ER SPSTSRG
Sbjct: 122 GAAEMDRKRIKEALEKHTERPSPSTSRG 205
Score = 46.0 bits (94), Expect(2) = 6e-040
Identities = 19/28 (67%), Positives = 21/28 (75%)
Frame = -1 / +1
Query: 1048 RRRRDGPEAHQGRAREAPGEVVAVYLQG 965
RRR DGPEAHQG A E G+ V V+LQG
Sbjct: 121 RRRGDGPEAHQGGAGETHGKAVPVHLQG 204
Score = 42.8 bits (87), Expect(2) = 5e-022
Identities = 18/22 (81%), Positives = 18/22 (81%)
Frame = -3 / +3
Query: 650 RSKMN*SSHLQRCCTV*FMHDT 585
RSKMN* SHLQRCC V* MH T
Sbjct: 519 RSKMN*LSHLQRCCMV*SMHGT 584
Score = 42.8 bits (87), Expect(2) = 6e-036
Identities = 18/29 (62%), Positives = 21/29 (72%)
Frame = +1 / -2
Query: 949 LLGHDAPGGRRRRPLQVLLERVLDALPVH 1035
LL PGG R RP +V L+R+LDALPVH
Sbjct: 220 LLPGRPPGGGRGRPFRVFLQRLLDALPVH 134
Score = 29.5 bits (58), Expect(2) = 4e-027
Identities = 13/16 (81%), Positives = 13/16 (81%)
Frame = +3 / -1
Query: 1002 SRARP*CASGPSLRRR 1049
S A P*CASGPS RRR
Sbjct: 167 SPAPP*CASGPSPRRR 120
Score = 28.1 bits (55), Expect(3) = 2e-064
Identities = 10/18 (55%), Positives = 15/18 (83%)
Frame = -2 / +2
Query: 957 SKERERLAAGKLPSSLGK 904
S+E+E LAAGK+ + +GK
Sbjct: 209 SREKEMLAAGKITTQIGK 262
>gb|CV054303.1|CV054303 BNEL109a5 Barley EST endosperm library Hordeum vulgare subsp.
vulgare cDNA clone BNEL109a5 5' similar to
OJ1058_B11.17, mRNA sequence
Length = 602
Score = 240 bits (519), Expect = 1e-062
Identities = 89/102 (87%), Positives = 96/102 (94%)
Frame = -2 / -2
Query: 567 LAAMLEKFKNYDFGRCPRVYCCGQPCLPAGQSDVPRSSTVKIYCPKCEELNYPRSKYQGN 388
LAAMLEK+KNYDFGRCPRVYCCGQPCLP GQSD+ RSSTVKIYCPKCE++ YPRSKYQGN
Sbjct: 601 LAAMLEKYKNYDFGRCPRVYCCGQPCLPIGQSDIHRSSTVKIYCPKCEDIYYPRSKYQGN 422
Query: 387 IDGSYFGTTFPHLFLMTYSHLKPQKPSQQYTPRVFGFKLHKP 262
IDG+Y+GTTFPHLFLMTY HLKPQK SQ+Y PRVFGFKLHKP
Sbjct: 421 IDGAYYGTTFPHLFLMTYDHLKPQKTSQRYVPRVFGFKLHKP 296
Score = 141 bits (302), Expect = 8e-033
Identities = 67/102 (65%), Positives = 73/102 (71%)
Frame = +2 / +3
Query: 263 GL*SLKPKTLGVYCCDGFCGFKCE*VIRKR*GNVVPKYDPSMLPWYLDLG*LSSSHFGQY 442
GL SLKP T G C+ F G + VIRKR*GNVVP PS+LPWYL+ G* SSH GQY
Sbjct: 297 GLWSLKPNTRGT*RCEVFWGLR*SYVIRKR*GNVVP**APSILPWYLERG**MSSHLGQY 476
Query: 443 IFTVLDLGTSDCPAGRQGWPQQYTLGHLPKS*FLNFSNIAAR 568
IFTVLD SDCP GR G PQQ T GH PKS*FL FS+IAA+
Sbjct: 477 IFTVLDR*ISDCPIGRHGCPQQ*TRGHRPKS*FLYFSSIAAK 602
>gb|BE194657.3|BE194657 HVSMEh0086G10f Hordeum vulgare 5-45 DAP spike EST library
HVcDNA0009 (5 to 45 DAP) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEh0086G10f, mRNA sequence
Length = 849
Score = 182 bits (391), Expect(3) = 4e-059
Identities = 71/84 (84%), Positives = 77/84 (91%)
Frame = -2 / +2
Query: 672 SNDDGFTEEQNELIESSAEMLYGLIHARYILTSKGLAAMLEKFKNYDFGRCPRVYCCGQP 493
S D FTEEQNEL+ES+AEMLYGLIHARYILTSKGLAAMLEK+KNY FGRCPRVYCCGQP
Sbjct: 224 SEGDIFTEEQNELVESAAEMLYGLIHARYILTSKGLAAMLEKYKNYYFGRCPRVYCCGQP 403
Query: 492 CLPAGQSDVPRSSTVKIYCPKCEE 421
CLP GQSD+ RS+TVKIYCPKC +
Sbjct: 404 CLPIGQSDIHRSNTVKIYCPKCRK 475
Score = 122 bits (261), Expect(3) = 2e-034
Identities = 57/82 (69%), Positives = 61/82 (74%)
Frame = +2 / -1
Query: 428 HFGQYIFTVLDLGTSDCPAGRQGWPQQYTLGHLPKS*FLNFSNIAARPLLVKMYRA*IKP 607
H GQ IFTVLD SDCP GR G PQQ T GH PK *FL FS+IAA PLLV+MYRA*I P
Sbjct: 468 HLGQ*IFTVLDR*ISDCPIGRHGCPQQ*TRGHRPK**FLYFSSIAANPLLVRMYRA*ISP 289
Query: 608 YSISADDSINSFCSSVNPSSLE 673
Y+ISA DS +SFCSSV S E
Sbjct: 288 YNISAADSTSSFCSSVKISPSE 223
Score = 45.5 bits (93), Expect(3) = 4e-059
Identities = 15/22 (68%), Positives = 20/22 (90%)
Frame = -2 / +3
Query: 390 NIDGSYFGTTFPHLFLMTYSHL 325
+IDG+++GTTFPH+ LMTY HL
Sbjct: 504 DIDGAFYGTTFPHMSLMTYHHL 569
Score = 45.5 bits (93), Expect(3) = 4e-059
Identities = 17/26 (65%), Positives = 23/26 (88%)
Frame = -2 / +2
Query: 1047 GGAGMDRKRIKDALEKHLERSSPSTS 970
GGAG+DRKRI +AL+KHLE+++ S S
Sbjct: 68 GGAGLDRKRISEALDKHLEKAAASPS 145
Score = 44.6 bits (91), Expect(3) = 2e-034
Identities = 19/27 (70%), Positives = 20/27 (74%)
Frame = +2 / -1
Query: 968 LEVDGDDLSRCFSSASLMRFRSIPAPP 1048
+E D SRC SSASLMRFRS PAPP
Sbjct: 147 VEGDAAAFSRCLSSASLMRFRSSPAPP 67
Score = 22.6 bits (43), Expect(3) = 2e-034
Identities = 11/17 (64%), Positives = 12/17 (70%)
Frame = +2 / -3
Query: 338 VIRKR*GNVVPKYDPSM 388
VIR *GNVVP PS+
Sbjct: 556 VIRDM*GNVVP*KAPSI 506
>gb|BG415776.2|BG415776 HVSMEk0007M10f Hordeum vulgare testa/pericarp EST library
HVcDNA0013 (normal) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEk0007M10f, mRNA sequence
Length = 664
Score = 205 bits (442), Expect(2) = 8e-059
Identities = 81/92 (88%), Positives = 87/92 (94%)
Frame = -2 / +3
Query: 822 WISWFCTLRGNEFFCEIDDDYIQDDFNLCGLSNQVPYYDYALDLILDIESSNDDGFTEEQ 643
WISW+C LRGNEFFCE+DDDYIQDDFNLCGLS+QVPYYDYALDLILDIESS+ D FTEE
Sbjct: 387 WISWYCNLRGNEFFCEVDDDYIQDDFNLCGLSSQVPYYDYALDLILDIESSHGDIFTEEX 566
Query: 642 NELIESSAEMLYGLIHARYILTSKGLAAMLEK 547
NEL+ES+AEMLYGL HARYILTSKGLAAMLEK
Sbjct: 567 NELVESAAEMLYGLXHARYILTSKGLAAMLEK 662
Score = 100 bits (212), Expect(2) = 6e-028
Identities = 50/118 (42%), Positives = 60/118 (50%)
Frame = +3 / -2
Query: 549 SPTLQLDPCWLKCIVHELNRTASLQMTRLIHFAPR*TRHH*KTQCLR*DQVHNHNMAPDY 728
SP Q W +CIVH T S Q+ L H * HH KT+ L+*DQ HNHNM D
Sbjct: 660 SPA*QPTLYWSECIVHXSAHTTSQQLIPLAHXVLL*KYHHGKTRYLK*DQEHNHNMELDC 481
Query: 729 SDHTG*NHPVYSHHRSHKRIHCLAMYRTMKSRTCPLPRNHSHQNLHCQFQIPHHQTPP 902
H *+H +HHR H+R H L TMKS L ++H H LHC P + P
Sbjct: 480 *AHKD*SHLECNHHRLHRRTHSLLGCNTMKSMRYLLHQSHQHLMLHCPTLTPLRSSGP 307
Score = 97.3 bits (206), Expect(2) = 6e-025
Identities = 48/93 (51%), Positives = 54/93 (58%)
Frame = +2 / -1
Query: 548 FSNIAARPLLVKMYRA*IKPYSISADDSINSFCSSVNPSSLEDXXXXXXXXXXXXYGT*L 727
FS+IAA PLLV+MYRA I PY+ISA DS +S CSSV S ED YGT*L
Sbjct: 661 FSSIAANPLLVRMYRAXISPYNISAADSTSSXCSSVKISPWEDSISKMRSRA*S*YGT*L 482
Query: 728 LRPHRLKXXXXXXXXXXQKNSLPRNVQNHEIQD 826
L P RLK QKNS P +Q HEI +
Sbjct: 481 LSPQRLKSS*M*SSSTSQKNSFPLRLQYHEIHE 383
Score = 45.5 bits (93), Expect(2) = 8e-059
Identities = 17/26 (65%), Positives = 23/26 (88%)
Frame = -2 / +3
Query: 1047 GGAGMDRKRIKDALEKHLERSSPSTS 970
GGAG+DRKRI +AL+KHLE+++ S S
Sbjct: 162 GGAGLDRKRISEALDKHLEKAAASPS 239
Score = 44.6 bits (91), Expect(2) = 6e-028
Identities = 19/27 (70%), Positives = 20/27 (74%)
Frame = +2 / -1
Query: 968 LEVDGDDLSRCFSSASLMRFRSIPAPP 1048
+E D SRC SSASLMRFRS PAPP
Sbjct: 241 VEGDAAAFSRCLSSASLMRFRSSPAPP 161
Score = 40.0 bits (81), Expect(2) = 6e-025
Identities = 17/23 (73%), Positives = 18/23 (78%)
Frame = +1 / -3
Query: 970 GGRRRRPLQVLLERVLDALPVHP 1038
GGRR R LQVL+ER DALPV P
Sbjct: 239 GGRRGRLLQVLIERFADALPVQP 171
>gb|BF265820.1|BF265820 HV_CEa0013G19f Hordeum vulgare seedling green leaf EST library
HVcDNA0004 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEa0013G19f, mRNA sequence
Length = 771
Score = 124 bits (266), Expect(4) = 3e-057
Identities = 46/66 (69%), Positives = 55/66 (83%)
Frame = -2 / +3
Query: 822 WISWFCTLRGNEFFCEIDDDYIQDDFNLCGLSNQVPYYDYALDLILDIESSNDDGFTEEQ 643
WISW C LRGN+FFC+ DDY++DDFN+CGLS+QVPYYDYALDLI+DI D FTE+
Sbjct: 300 WISWDCNLRGNDFFCDDGDDYVRDDFNVCGLSSQVPYYDYALDLIVDIAYCTGDIFTEKH 479
Query: 642 NELIES 625
NEL+ES
Sbjct: 480 NELLES 497
Score = 73.9 bits (155), Expect(4) = 3e-057
Identities = 31/43 (72%), Positives = 33/43 (76%)
Frame = -2 / +1
Query: 624 SAEMLYGLIHARYILTSKGLAAMLEKFKNYDFGRCPRVYCCGQ 496
+A+MLYGLIHARYILT GLAAMLEK YD GRC Y CGQ
Sbjct: 499 AADMLYGLIHARYILTM*GLAAMLEKCNIYDXGRCAPAYWCGQ 627
Score = 66.6 bits (139), Expect(4) = 1e-032
Identities = 33/80 (41%), Positives = 40/80 (50%)
Frame = +3 / -1
Query: 663 HH*KTQCLR*DQVHNHNMAPDYSDHTG*NHPVYSHHRSHKRIHCLAMYRTMKSRTCPLPR 842
H T+ L+*DQ HNHNM D *+H +HHR H+R H L MKS L +
Sbjct: 459 HQCNTRYLQ*DQEHNHNMELDC*ARKH*SHLERNHHRRHRRSHSLLGCNPMKSMRYLLHQ 280
Query: 843 NHSHQNLHCQFQIPHHQTPP 902
+H H LHC P T P
Sbjct: 279 SHRHLMLHCPTLTPLRSTGP 220
Score = 54.7 bits (113), Expect(4) = 1e-032
Identities = 24/41 (58%), Positives = 30/41 (73%)
Frame = +2 / -2
Query: 500 PQQYTLGHLPKS*FLNFSNIAARPLLVKMYRA*IKPYSISA 622
P Q H P S* L+FS+IAA P +V+MYRA*I PY++SA
Sbjct: 623 PHQ*AGAHRPXS*MLHFSSIAANPYMVRMYRA*ISPYNMSA 501
Score = 54.2 bits (112), Expect(4) = 2e-021
Identities = 25/61 (40%), Positives = 37/61 (60%)
Frame = +1 / -2
Query: 688 DEIKCIIIIWHLITQTTQVKIILYIVIIDLTKEFIASQCTEP*NPGRVLSLGTTHIRIFT 867
+EIK IIIIW+L + +++I ++I +T+E I S P*NP + S+ T I FT
Sbjct: 434 NEIKSIIIIWNLTAEPANIEVISNVIITVVTEEVIPS*VAIP*NP*GIFSIRATDISCFT 255
Query: 868 V 870
V
Sbjct: 254 V 252
Score = 49.6 bits (102), Expect(4) = 3e-057
Identities = 18/27 (66%), Positives = 23/27 (85%)
Frame = -2 / +2
Query: 498 QPCLPAGQSDVPRSSTVKIYCPKCEEL 418
+PCLP GQS+V RSST +IYC KC++L
Sbjct: 626 KPCLPIGQSNVARSSTGEIYCAKCQKL 706
Score = 48.3 bits (99), Expect(4) = 8e-021
Identities = 29/63 (46%), Positives = 41/63 (65%)
Frame = -1 / +2
Query: 868 Q*RF*CEWFRGRGHVLDFMVLYIARQ*ILL*DR**LYTG*F*PVWSE*SGAIL*LCT*SH 689
Q* C W R +++DFM L R+*+LL* R**L + * + ++ S +IL*LC+*SH
Sbjct: 254 Q*SMRCRWL*WRRYLMDFMGLQPKRE*LLL*RR**LRSR*LQCLRAQQSSSIL*LCS*SH 433
Query: 688 LRH 680
R+
Sbjct: 434 CRY 442
Score = 47.8 bits (98), Expect(4) = 8e-021
Identities = 21/49 (42%), Positives = 26/49 (53%)
Frame = -3 / +2
Query: 623 LQRCCTV*FMHDTF*PARV*LQCWRSSRTTTLVDAPGCTAVASPAFQQG 477
L CC *FMHDTF*P + L CW+++ +TT D V P G
Sbjct: 500 LLTCCMG*FMHDTF*PCKGWLLCWKNATSTTXDDVHPLIGVDKPCLPIG 646
Score = 41.8 bits (85), Expect(4) = 2e-021
Identities = 20/46 (43%), Positives = 26/46 (56%)
Frame = +1 / -1
Query: 478 PCWKAGLATAVHPGASTKVVVLELLQHCS*TLAG*NVSCMN*TVQH 615
P + GL+T + S+ VV + QH S L G NVSCMN +QH
Sbjct: 645 PIGRHGLSTPISGCTSSXVVDVAFFQHSSQPLHGQNVSCMNQPIQH 508
Score = 37.7 bits (76), Expect(4) = 1e-032
Identities = 16/23 (69%), Positives = 17/23 (73%)
Frame = +1 / -2
Query: 970 GGRRRRPLQVLLERVLDALPVHP 1038
GGRR R LQVL+ER D LPV P
Sbjct: 152 GGRRGRLLQVLIERFADELPVQP 84
Score = 36.8 bits (74), Expect(4) = 1e-032
Identities = 14/23 (60%), Positives = 14/23 (60%)
Frame = +2 / -1
Query: 428 HFGQYIFTVLDLGTSDCPAGRQG 496
H QYI VLD T DCP GR G
Sbjct: 696 HLAQYISPVLDRATFDCPIGRHG 628
Score = 36.8 bits (74), Expect(4) = 3e-057
Identities = 14/26 (53%), Positives = 21/26 (80%)
Frame = -2 / +3
Query: 1047 GGAGMDRKRIKDALEKHLERSSPSTS 970
G AG+DRK I +AL++HLE+++ S S
Sbjct: 75 GWAGLDRKLISEALDQHLEKAAASPS 152
Score = 35.9 bits (72), Expect(4) = 2e-021
Identities = 17/27 (62%), Positives = 18/27 (66%)
Frame = +2 / -3
Query: 968 LEVDGDDLSRCFSSASLMRFRSIPAPP 1048
+E D SRC SSASLM FRS PA P
Sbjct: 154 VEGDAAAFSRC*SSASLMSFRSSPAHP 74
Score = 35.4 bits (71), Expect(4) = 8e-021
Identities = 16/28 (57%), Positives = 18/28 (64%)
Frame = -1 / +2
Query: 1033 GPEAHQGRAREAPGEVVAVYLQGRRVQG 950
GPEAHQ AR APGE V L +R+ G
Sbjct: 89 GPEAHQRSARSAPGEGGRVALHVKRLGG 172
Score = 25.4 bits (49), Expect(4) = 2e-021
Identities = 11/22 (50%), Positives = 12/22 (54%)
Frame = +1 / -3
Query: 421 FFAFRTIYLHSARSRNI*LPCW 486
F A +YL RS NI*L W
Sbjct: 703 FLALSAVYLPCTRSGNI*LSNW 638
Score = 23.5 bits (45), Expect(4) = 8e-021
Identities = 11/24 (45%), Positives = 13/24 (54%)
Frame = -3 / +3
Query: 491 AFQQGNQMFLDRAL*RYIVRNAKN 420
A+Q NQM D RY +AKN
Sbjct: 633 AYQLDNQMLPDLVQGRYTALSAKN 704
>gb|AW982908.2|AW982908 HVSMEg0004I13f Hordeum vulgare pre-anthesis spike EST library
HVcDNA0008 (white to yellow anther) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEg0004I13f, mRNA sequence
Length = 554
Score = 193 bits (415), Expect(2) = 3e-055
Identities = 76/94 (80%), Positives = 86/94 (91%)
Frame = -2 / +2
Query: 822 WISWFCTLRGNEFFCEIDDDYIQDDFNLCGLSNQVPYYDYALDLILDIESSNDDGFTEEQ 643
WISW+C LRGNEFFCE+DDDYIQDDFNLCGLS+QVPYYDYALDLILDIE+S+ D FTE Q
Sbjct: 272 WISWYCNLRGNEFFCEVDDDYIQDDFNLCGLSSQVPYYDYALDLILDIEASHGDIFTERQ 451
Query: 642 NELIESSAEMLYGLIHARYILTSKGLAAMLEKFK 541
NEL+ S+AE++ GLIHARYILTSK LA MLEK+K
Sbjct: 452 NELMGSTAEIVDGLIHARYILTSKRLACMLEKYK 553
Score = 95.9 bits (203), Expect(2) = 1e-026
Identities = 48/118 (40%), Positives = 59/118 (50%)
Frame = +3 / -1
Query: 549 SPTLQLDPCWLKCIVHELNRTASLQMTRLIHFAPR*TRHH*KTQCLR*DQVHNHNMAPDY 728
SP + W +CIVHE Q+ L HF * HH K + L+*DQ HNHNM D
Sbjct: 545 SPAYKPTFYWSECIVHESAHPQFQQLIPLAHFVFL*KYHHGKPRYLK*DQEHNHNMELDC 366
Query: 729 SDHTG*NHPVYSHHRSHKRIHCLAMYRTMKSRTCPLPRNHSHQNLHCQFQIPHHQTPP 902
H *+H +HHR H+R H L TMKS L ++H H LHC P + P
Sbjct: 365 *AHKD*SHLECNHHRLHRRTHSLLGCNTMKSMRYLLHQSHQHLMLHCPTLTPLRSSGP 192
Score = 85.8 bits (181), Expect(2) = 1e-021
Identities = 46/95 (48%), Positives = 52/95 (54%)
Frame = +2 / -3
Query: 542 LNFSNIAARPLLVKMYRA*IKPYSISADDSINSFCSSVNPSSLEDXXXXXXXXXXXXYGT 721
L FS+I A LLV+MYRA*I P +ISA D I+SFC SV S E YGT
Sbjct: 552 LYFSSIQANLLLVRMYRA*ISPSTISAVDPISSFCLSVKISPWEASISKMRSRA*S*YGT 373
Query: 722 *LLRPHRLKXXXXXXXXXXQKNSLPRNVQNHEIQD 826
*LL P RLK QKNS P +Q HEI +
Sbjct: 372 *LLSPQRLKSS*M*SSSTSQKNSFPLRLQYHEIHE 268
Score = 45.5 bits (93), Expect(2) = 3e-055
Identities = 17/26 (65%), Positives = 23/26 (88%)
Frame = -2 / +2
Query: 1047 GGAGMDRKRIKDALEKHLERSSPSTS 970
GGAG+DRKRI +AL+KHLE+++ S S
Sbjct: 47 GGAGLDRKRISEALDKHLEKAAASPS 124
Score = 44.6 bits (91), Expect(2) = 1e-026
Identities = 19/27 (70%), Positives = 20/27 (74%)
Frame = +2 / -3
Query: 968 LEVDGDDLSRCFSSASLMRFRSIPAPP 1048
+E D SRC SSASLMRFRS PAPP
Sbjct: 126 VEGDAAAFSRCLSSASLMRFRSSPAPP 46
Score = 40.0 bits (81), Expect(2) = 1e-021
Identities = 17/23 (73%), Positives = 18/23 (78%)
Frame = +1 / -2
Query: 970 GGRRRRPLQVLLERVLDALPVHP 1038
GGRR R LQVL+ER DALPV P
Sbjct: 124 GGRRGRLLQVLIERFADALPVQP 56
>gb|CA009861.1|CA009861 HT12G23u HT Hordeum vulgare subsp. vulgare cDNA clone HT12G23
3-PRIME, mRNA sequence
Length = 543
Score = 210 bits (452), Expect = 2e-053
Identities = 77/89 (86%), Positives = 82/89 (92%)
Frame = -2 / -1
Query: 528 GRCPRVYCCGQPCLPAGQSDVPRSSTVKIYCPKCEELNYPRSKYQGNIDGSYFGTTFPHL 349
GRCPRV+C GQPCLP GQSD+PRSS VKIYCPKCE+L YPRSKYQ NIDG+YFGTTFPHL
Sbjct: 543 GRCPRVHCSGQPCLPVGQSDIPRSSNVKIYCPKCEDLYYPRSKYQSNIDGAYFGTTFPHL 364
Query: 348 FLMTYSHLKPQKPSQQYTPRVFGFKLHKP 262
FLMTY HLKPQKPSQQY P+VFGFKLHKP
Sbjct: 363 FLMTYPHLKPQKPSQQYVPKVFGFKLHKP 277
Score = 157 bits (338), Expect = 9e-038
Identities = 68/88 (77%), Positives = 71/88 (80%)
Frame = +2 / +2
Query: 263 GL*SLKPKTLGVYCCDGFCGFKCE*VIRKR*GNVVPKYDPSMLPWYLDLG*LSSSHFGQY 442
GL*SLKPKTLG YCCDGF GFKC *VIR +*GNVVPKY PSML YLDLG* SSHFGQ
Sbjct: 278 GL*SLKPKTLGTYCCDGFWGFKCG*VIRNK*GNVVPKYAPSMLL*YLDLG**RSSHFGQ* 457
Query: 443 IFTVLDLGTSDCPAGRQGWPQQYTLGHL 526
IFT+L+ G SD P GR GWP Q TLGHL
Sbjct: 458 IFTLLERGMSDWPTGRHGWPLQCTLGHL 541
>gb|CA002012.1|CA002012 HS06E04r HS Hordeum vulgare subsp. vulgare cDNA clone HS06E04
5-PRIME, mRNA sequence
Length = 628
Score = 187 bits (402), Expect(2) = 2e-053
Identities = 72/81 (88%), Positives = 78/81 (96%)
Frame = -2 / +2
Query: 822 WISWFCTLRGNEFFCEIDDDYIQDDFNLCGLSNQVPYYDYALDLILDIESSNDDGFTEEQ 643
WISW+C LRGNEFFCE+DDDYIQDDFNLCGLS+QVPYYDYALDLILDIESS+ D FTEEQ
Sbjct: 386 WISWYCNLRGNEFFCEVDDDYIQDDFNLCGLSSQVPYYDYALDLILDIESSHGDIFTEEQ 565
Query: 642 NELIESSAEMLYGLIHARYIL 580
NEL+ES+AEMLYGLIHARYIL
Sbjct: 566 NELVESAAEMLYGLIHARYIL 628
Score = 100 bits (213), Expect(2) = 5e-028
Identities = 48/107 (44%), Positives = 58/107 (54%)
Frame = +3 / -3
Query: 582 KCIVHELNRTASLQMTRLIHFAPR*TRHH*KTQCLR*DQVHNHNMAPDYSDHTG*NHPVY 761
+CIVHE T S Q+ L HF * HH KT+ L+*DQ HNHNM D H *+H
Sbjct: 626 ECIVHESAHTTSQQLIPLAHFVLL*KYHHGKTRYLK*DQEHNHNMELDC*AHKD*SHLEC 447
Query: 762 SHHRSHKRIHCLAMYRTMKSRTCPLPRNHSHQNLHCQFQIPHHQTPP 902
+HHR H+R H L TMKS L ++H H LHC P + P
Sbjct: 446 NHHRLHRRTHSLLGCNTMKSMRYLLHQSHQHLMLHCPTLTPLRSSGP 306
Score = 83.5 bits (176), Expect(2) = 7e-021
Identities = 41/82 (50%), Positives = 46/82 (56%)
Frame = +2 / -2
Query: 581 KMYRA*IKPYSISADDSINSFCSSVNPSSLEDXXXXXXXXXXXXYGT*LLRPHRLKXXXX 760
+MYRA*I PY+ISA DS +SFCSSV S ED YGT*LL P RLK
Sbjct: 627 RMYRA*ISPYNISAADSTSSFCSSVKISPWEDSISKMRSRA*S*YGT*LLSPQRLKSS*M 448
Query: 761 XXXXXXQKNSLPRNVQNHEIQD 826
QKNS P +Q HEI +
Sbjct: 447 *SSSTSQKNSFPLRLQYHEIHE 382
Score = 45.5 bits (93), Expect(2) = 2e-053
Identities = 17/26 (65%), Positives = 23/26 (88%)
Frame = -2 / +2
Query: 1047 GGAGMDRKRIKDALEKHLERSSPSTS 970
GGAG+DRKRI +AL+KHLE+++ S S
Sbjct: 161 GGAGLDRKRISEALDKHLEKAAASPS 238
Score = 44.6 bits (91), Expect(2) = 5e-028
Identities = 19/27 (70%), Positives = 20/27 (74%)
Frame = +2 / -2
Query: 968 LEVDGDDLSRCFSSASLMRFRSIPAPP 1048
+E D SRC SSASLMRFRS PAPP
Sbjct: 240 VEGDAAAFSRCLSSASLMRFRSSPAPP 160
Score = 40.0 bits (81), Expect(2) = 7e-021
Identities = 17/23 (73%), Positives = 18/23 (78%)
Frame = +1 / -1
Query: 970 GGRRRRPLQVLLERVLDALPVHP 1038
GGRR R LQVL+ER DALPV P
Sbjct: 238 GGRRGRLLQVLIERFADALPVQP 170
>gb|BQ466667.1|BQ466667 HS01D11T HS Hordeum vulgare subsp. vulgare cDNA clone HS01D11
5-PRIME, mRNA sequence
Length = 574
Score = 197 bits (425), Expect = 9e-050
Identities = 73/85 (85%), Positives = 78/85 (91%)
Frame = -2 / +1
Query: 516 RVYCCGQPCLPAGQSDVPRSSTVKIYCPKCEELNYPRSKYQGNIDGSYFGTTFPHLFLMT 337
RV+C GQPCLP GQSD+PRSS VKIYCPKCE+L YPRSKYQ NIDG+YFGTTFPHLFLMT
Sbjct: 13 RVHCSGQPCLPVGQSDIPRSSNVKIYCPKCEDLYYPRSKYQSNIDGAYFGTTFPHLFLMT 192
Query: 336 YSHLKPQKPSQQYTPRVFGFKLHKP 262
Y HLKPQKPSQQY P+VFGFKLHKP
Sbjct: 193 YPHLKPQKPSQQYVPKVFGFKLHKP 267
Score = 149 bits (320), Expect = 3e-035
Identities = 65/85 (76%), Positives = 68/85 (80%)
Frame = +2 / -3
Query: 263 GL*SLKPKTLGVYCCDGFCGFKCE*VIRKR*GNVVPKYDPSMLPWYLDLG*LSSSHFGQY 442
GL*SLKPKTLG YCCDGF GFKC *VIR +*GNVVPKY PSML YLDLG* SSHFGQ
Sbjct: 266 GL*SLKPKTLGTYCCDGFWGFKCG*VIRNK*GNVVPKYAPSMLL*YLDLG**RSSHFGQ* 87
Query: 443 IFTVLDLGTSDCPAGRQGWPQQYTL 517
IFT+L+ G SD P GR GWP Q TL
Sbjct: 86 IFTLLERGMSDWPTGRHGWPLQCTL 12
>gb|BQ466990.1|BQ466990 HS02D11r HS Hordeum vulgare subsp. vulgare cDNA clone HS02D11
5-PRIME, mRNA sequence
Length = 538
Score = 197 bits (425), Expect = 9e-050
Identities = 73/85 (85%), Positives = 78/85 (91%)
Frame = -2 / +1
Query: 516 RVYCCGQPCLPAGQSDVPRSSTVKIYCPKCEELNYPRSKYQGNIDGSYFGTTFPHLFLMT 337
RV+C GQPCLP GQSD+PRSS VKIYCPKCE+L YPRSKYQ NIDG+YFGTTFPHLFLMT
Sbjct: 13 RVHCSGQPCLPVGQSDIPRSSNVKIYCPKCEDLYYPRSKYQSNIDGAYFGTTFPHLFLMT 192
Query: 336 YSHLKPQKPSQQYTPRVFGFKLHKP 262
Y HLKPQKPSQQY P+VFGFKLHKP
Sbjct: 193 YPHLKPQKPSQQYVPKVFGFKLHKP 267
Score = 149 bits (320), Expect = 3e-035
Identities = 65/85 (76%), Positives = 68/85 (80%)
Frame = +2 / -3
Query: 263 GL*SLKPKTLGVYCCDGFCGFKCE*VIRKR*GNVVPKYDPSMLPWYLDLG*LSSSHFGQY 442
GL*SLKPKTLG YCCDGF GFKC *VIR +*GNVVPKY PSML YLDLG* SSHFGQ
Sbjct: 266 GL*SLKPKTLGTYCCDGFWGFKCG*VIRNK*GNVVPKYAPSMLL*YLDLG**RSSHFGQ* 87
Query: 443 IFTVLDLGTSDCPAGRQGWPQQYTL 517
IFT+L+ G SD P GR GWP Q TL
Sbjct: 86 IFTLLERGMSDWPTGRHGWPLQCTL 12
>gb|BQ662231.1|BQ662231 HS01D11w HS Hordeum vulgare subsp. vulgare cDNA clone HS01D11
3-PRIME, mRNA sequence
Length = 650
Score = 197 bits (425), Expect = 9e-050
Identities = 73/85 (85%), Positives = 78/85 (91%)
Frame = -2 / -2
Query: 516 RVYCCGQPCLPAGQSDVPRSSTVKIYCPKCEELNYPRSKYQGNIDGSYFGTTFPHLFLMT 337
RV+C GQPCLP GQSD+PRSS VKIYCPKCE+L YPRSKYQ NIDG+YFGTTFPHLFLMT
Sbjct: 649 RVHCSGQPCLPVGQSDIPRSSNVKIYCPKCEDLYYPRSKYQSNIDGAYFGTTFPHLFLMT 470
Query: 336 YSHLKPQKPSQQYTPRVFGFKLHKP 262
Y HLKPQKPSQQY P+VFGFKLHKP
Sbjct: 469 YPHLKPQKPSQQYVPKVFGFKLHKP 395
Score = 149 bits (320), Expect = 3e-035
Identities = 65/85 (76%), Positives = 68/85 (80%)
Frame = +2 / +3
Query: 263 GL*SLKPKTLGVYCCDGFCGFKCE*VIRKR*GNVVPKYDPSMLPWYLDLG*LSSSHFGQY 442
GL*SLKPKTLG YCCDGF GFKC *VIR +*GNVVPKY PSML YLDLG* SSHFGQ
Sbjct: 396 GL*SLKPKTLGTYCCDGFWGFKCG*VIRNK*GNVVPKYAPSMLL*YLDLG**RSSHFGQ* 575
Query: 443 IFTVLDLGTSDCPAGRQGWPQQYTL 517
IFT+L+ G SD P GR GWP Q TL
Sbjct: 576 IFTLLERGMSDWPTGRHGWPLQCTL 650
>gb|BQ464988.1|BQ464988 HU02F10r HU Hordeum vulgare subsp. vulgare cDNA clone HU02F10
5-PRIME, mRNA sequence
Length = 428
Score = 195 bits (421), Expect = 3e-049
Identities = 76/98 (77%), Positives = 87/98 (88%)
Frame = -2 / +1
Query: 822 WISWFCTLRGNEFFCEIDDDYIQDDFNLCGLSNQVPYYDYALDLILDIESSNDDGFTEEQ 643
WI+WFC +RGNEFF E+DDDYIQDDFNLCGLS QVPYYD+ALDLILD+E +D F ++Q
Sbjct: 133 WINWFCAMRGNEFFAEVDDDYIQDDFNLCGLSAQVPYYDHALDLILDLEPVQEDVFADDQ 312
Query: 642 NELIESSAEMLYGLIHARYILTSKGLAAMLEKFKNYDF 529
NEL+ +SAEMLYGLIHAR ILT+KGLAAMLEKFKN DF
Sbjct: 313 NELVVASAEMLYGLIHARNILTTKGLAAMLEKFKNCDF 426
>gb|BQ662841.1|BQ662841 HS04G18u HS Hordeum vulgare subsp. vulgare cDNA clone HS04G18
3-PRIME, mRNA sequence
Length = 435
Score = 184 bits (397), Expect(2) = 1e-048
Identities = 70/79 (88%), Positives = 76/79 (96%)
Frame = -2 / -1
Query: 486 PAGQSDVPRSSTVKIYCPKCEELNYPRSKYQGNIDGSYFGTTFPHLFLMTYSHLKPQKPS 307
PAGQSD+PRSSTVK++CPKCE+L+YPRSKYQGNIDG+YFGTTFPHLFLMTY HLKPQKPS
Sbjct: 435 PAGQSDIPRSSTVKVFCPKCEDLHYPRSKYQGNIDGAYFGTTFPHLFLMTYPHLKPQKPS 256
Query: 306 QQYTPRVFGFKLHKPS*QS 250
QQY PRVFGFKLHK S*QS
Sbjct: 255 QQYVPRVFGFKLHKQS*QS 199
Score = 163 bits (351), Expect(2) = 2e-044
Identities = 65/77 (84%), Positives = 67/77 (87%)
Frame = +2 / +2
Query: 254 CHDGL*SLKPKTLGVYCCDGFCGFKCE*VIRKR*GNVVPKYDPSMLPWYLDLG*LSSSHF 433
CHD L*SLKPKTLG YCCDGFCGF+C VI+KR*GNVVPKY PSMLPWYLDLG* SSHF
Sbjct: 203 CHDCL*SLKPKTLGTYCCDGFCGFRCGYVIKKR*GNVVPKYAPSMLPWYLDLG*CKSSHF 382
Query: 434 GQYIFTVLDLGTSDCPA 484
GQ FTVLDLG SDCPA
Sbjct: 383 GQNTFTVLDLGMSDCPA 433
Score = 104 bits (221), Expect(2) = 2e-023
Identities = 47/77 (61%), Positives = 56/77 (72%)
Frame = -1 / -3
Query: 484 SRAIRCS*IEHCEDILSEMRRT*LSKIQVPRQHRWIILWDDIPSSFPDDXXXXXXXXAVT 305
SRAIR S*++H E +LS+M R LSK+QVPRQH W ILW D+PSS DD A+T
Sbjct: 433 SRAIRHS*VKHSEGVLSKM*RLTLSKVQVPRQH*WSILWYDVPSSLLDDISTPEATEAIT 254
Query: 304 AIHSKGFRLQTSQAVMT 254
AI SKGF LQTSQA++T
Sbjct: 253 AIRSKGFWLQTSQAIVT 203
Score = 89.5 bits (189), Expect(2) = 1e-021
Identities = 43/77 (55%), Positives = 47/77 (61%)
Frame = +3 / +3
Query: 255 VMTACEV*SRKPLECIAVTXXXXXXXXXXXGKDEGMSSQSMIHRCCLGTWILDS*VLRIS 434
V ACEV*S+KPLE IAV +DEG S QSM+H+CCLGTW LDS L I
Sbjct: 204 VTIACEV*SQKPLERIAVMASVASGVDMSSRRDEGTSYQSMLHQCCLGTWTLDSVSLHIL 383
Query: 435 DNISSQCSI*EHLIALL 485
D S C *E LIALL
Sbjct: 384 DKTPSLCLT*ECLIALL 434
Score = 36.3 bits (73), Expect(2) = 2e-044
Identities = 13/26 (50%), Positives = 20/26 (76%)
Frame = +3 / +2
Query: 96 TVIISENRYNFTIVYSEAQAREFVHQ 173
T +I +NRYN + VYS+ +ARE+ +Q
Sbjct: 47 TAVIQQNRYNCSAVYSKIRAREYSNQ 124
Score = 34.1 bits (68), Expect(2) = 1e-021
Identities = 16/29 (55%), Positives = 19/29 (65%)
Frame = +1 / +3
Query: 106 YRKTDTISQ*FTARPRLANSYINNTTVFE 192
Y KTDTI+Q FTAR LA++ I FE
Sbjct: 57 YNKTDTIAQQFTARFELASTRIKRPQHFE 143
Score = 29.5 bits (58), Expect(2) = 1e-048
Identities = 12/23 (52%), Positives = 14/23 (60%)
Frame = -2 / -2
Query: 174 IDVRIREPGPRCKLL*NCICFPI 106
+D RE CKLL NCICF +
Sbjct: 125 LDSSTRELESCCKLLSNCICFVV 57
Score = 25.4 bits (49), Expect(2) = 2e-023
Identities = 14/29 (48%), Positives = 16/29 (55%)
Frame = -3 / -3
Query: 176 LLMYEFASLGLAVNYCEIVSVFRYYYCCV 90
LL+ AS LAVN IVSV Y C +
Sbjct: 127 LLIRVLASSNLAVNC*AIVSVLLYDCCVI 41
>gb|BF617114.2|BF617114 HVSMEc0014K08f Hordeum vulgare seedling shoot EST library
HVcDNA0003 (Etiolated and unstressed) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEc0014K08f, mRNA sequence
Length = 782
Score = 120 bits (257), Expect(5) = 9e-047
Identities = 50/76 (65%), Positives = 54/76 (71%)
Frame = -2 / +3
Query: 900 EVSDGEEFXXXXXXXXXXXXXXXXXSWISWFCTLRGNEFFCEIDDDYIQDDFNLCGLSNQ 721
+VSD EEF SWISWFC+LRGNEFF EIDDDYIQDDFNLCGLSNQ
Sbjct: 309 KVSDVEEFETDSEDSDVSGSEGEDTSWISWFCSLRGNEFFWEIDDDYIQDDFNLCGLSNQ 488
Query: 720 VPYYDYALDLILDIES 673
VP YDYAL LIL+ E+
Sbjct: 489 VPIYDYALGLILNNEA 536
Score = 120 bits (257), Expect(3) = 7e-040
Identities = 46/74 (62%), Positives = 55/74 (74%)
Frame = +3 / -3
Query: 672 KTQCLR*DQVHNHNMAPDYSDHTG*NHPVYSHHRSHKRIHCLAMYRTMKSRTCPLPRNHS 851
+ CL * QVHNH +APD H *NHPVY+HH+S +RI CLA YRTMKS+ CPL +N
Sbjct: 537 RLHCLG*VQVHNHKLAPDCLGHRD*NHPVYNHHQSPRRIRCLASYRTMKSKMCPLLQNR* 358
Query: 852 HQNLHCQFQIPHHQ 893
HQNLHCQF+IP +
Sbjct: 357 HQNLHCQFRIPRRR 316
Score = 108 bits (230), Expect(2) = 8e-030
Identities = 47/70 (67%), Positives = 57/70 (81%)
Frame = +1 / -1
Query: 682 V*DEIKCIIIIWHLITQTTQVKIILYIVIIDLTKEFIASQCTEP*NPGRVLSLGTTHIRI 861
V*DE KCIII WHLI T+++IILYI+II+L +EF+ASQ TEP*NP VLS T +IRI
Sbjct: 527 V*DESKCIIINWHLIA*ATEIEIILYIIIINLPEEFVASQATEP*NPRCVLSFRTANIRI 348
Query: 862 FTVSFKFLTI 891
FTVSF+FL +
Sbjct: 347 FTVSFEFLDV 318
Score = 80.3 bits (169), Expect(3) = 6e-024
Identities = 43/62 (69%), Positives = 48/62 (77%)
Frame = -1 / +2
Query: 874 N*Q*RF*CEWFRGRGHVLDFMVLYIARQ*ILL*DR**LYTG*F*PVWSE*SGAIL*LCT* 695
N*Q*RF*C F RGH+LDFMVL +ARQ ILL D **LYTG*F +W + SGA L*LCT
Sbjct: 335 N*Q*RF*C*RF*RRGHILDFMVL*LARQRILLGD***LYTG*FQSLWPKQSGANL*LCTW 514
Query: 694 SH 689
+H
Sbjct: 515 TH 520
Score = 55.6 bits (115), Expect(3) = 7e-040
Identities = 24/28 (85%), Positives = 24/28 (85%)
Frame = +2 / -2
Query: 965 PLEVDGDDLSRCFSSASLMRFRSIPAPP 1048
PLEVDGD LS CFSSASLMRFRSI A P
Sbjct: 244 PLEVDGDGLSVCFSSASLMRFRSISAAP 161
Score = 55.1 bits (114), Expect(5) = 9e-047
Identities = 23/28 (82%), Positives = 24/28 (85%)
Frame = -2 / +3
Query: 1047 GGAGMDRKRIKDALEKHLERSSPSTSRG 964
G A MDRKRIK+ALEKH ER SPSTSRG
Sbjct: 162 GAAEMDRKRIKEALEKHTERPSPSTSRG 245
Score = 46.0 bits (94), Expect(3) = 6e-024
Identities = 19/28 (67%), Positives = 21/28 (75%)
Frame = -1 / +2
Query: 1048 RRRRDGPEAHQGRAREAPGEVVAVYLQG 965
RRR DGPEAHQG A E G+ V V+LQG
Sbjct: 161 RRRGDGPEAHQGGAGETHGKAVPVHLQG 244
Score = 42.8 bits (87), Expect(2) = 8e-030
Identities = 18/29 (62%), Positives = 21/29 (72%)
Frame = +1 / -1
Query: 949 LLGHDAPGGRRRRPLQVLLERVLDALPVH 1035
LL PGG R RP +V L+R+LDALPVH
Sbjct: 260 LLPGRPPGGGRGRPFRVFLQRLLDALPVH 174
Score = 33.6 bits (67), Expect(5) = 9e-047
Identities = 13/18 (72%), Positives = 15/18 (83%)
Frame = -2 / +2
Query: 618 EMLYGLIHARYILTSKGL 565
+MLYGLIHARYIL G+
Sbjct: 596 KMLYGLIHARYILNLPGV 649
Score = 27.6 bits (54), Expect(5) = 9e-047
Identities = 10/18 (55%), Positives = 15/18 (83%)
Frame = -2 / +3
Query: 957 SKERERLAAGKLPSSLGK 904
S+E+E LAAGK+ + +GK
Sbjct: 249 SREKEMLAAGKITTHIGK 302
Score = 26.7 bits (52), Expect(3) = 7e-040
Identities = 11/16 (68%), Positives = 13/16 (81%)
Frame = +2 / -3
Query: 569 PLLVKMYRA*IKPYSI 616
P ++MYRA IKPYSI
Sbjct: 645 PGKLRMYRAWIKPYSI 598
Score = 24.4 bits (47), Expect(5) = 9e-047
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = -2 / +1
Query: 519 PRVYCCG 499
PRVYCCG
Sbjct: 703 PRVYCCG 723
Score = 22.6 bits (43), Expect(3) = 6e-024
Identities = 7/12 (58%), Positives = 9/12 (75%)
Frame = -1 / +1
Query: 619 RDAVRFNSCTIH 584
+DAV FN C +H
Sbjct: 595 KDAVWFNPCPVH 630
>gb|BM377223.2|BM377223 EBem05_SQ004_H19_R embryo, 14 DPA, no treatment, cv Optic, EBem05
Hordeum vulgare subsp. vulgare cDNA clone
EBem05_SQ004_H19 5', mRNA sequence
Length = 538
Score = 116 bits (248), Expect(2) = 3e-046
Identities = 41/48 (85%), Positives = 44/48 (91%)
Frame = -2 / -2
Query: 537 YDFGRCPRVYCCGQPCLPAGQSDVPRSSTVKIYCPKCEELNYPRSKYQ 394
YDFGRCPRVYCCGQPCLP GQSD+ RSSTVKIYCPKCE++ YPR KYQ
Sbjct: 537 YDFGRCPRVYCCGQPCLPIGQSDIHRSSTVKIYCPKCEDIYYPRFKYQ 394
Score = 89.5 bits (189), Expect(2) = 3e-046
Identities = 34/43 (79%), Positives = 38/43 (88%)
Frame = -2 / -2
Query: 390 NIDGSYFGTTFPHLFLMTYSHLKPQKPSQQYTPRVFGFKLHKP 262
+IDG+Y+GTTFPHLFLMTY LKPQK SQ+Y PRVFGFKL KP
Sbjct: 393 DIDGAYYGTTFPHLFLMTYDPLKPQKTSQRYVPRVFGFKLPKP 265
Score = 77.6 bits (163), Expect(2) = 1e-022
Identities = 34/50 (68%), Positives = 35/50 (70%)
Frame = +2 / +2
Query: 389 LPWYLDLG*LSSSHFGQYIFTVLDLGTSDCPAGRQGWPQQYTLGHLPKS* 538
+ WYL G* SSH GQYIFTVLD SDCP GR G PQQ T GH PKS*
Sbjct: 389 ISWYLKRG**MSSHLGQYIFTVLDR*ISDCPIGRHGCPQQ*TRGHRPKS* 538
Score = 49.6 bits (102), Expect(2) = 1e-022
Identities = 24/42 (57%), Positives = 28/42 (66%)
Frame = +2 / +2
Query: 263 GL*SLKPKTLGVYCCDGFCGFKCE*VIRKR*GNVVPKYDPSM 388
GL SLKP T G Y C+ F G + VI+KR*GNVVP PS+
Sbjct: 266 GLGSLKPNTRGTYRCEVFWGLRGSYVIKKR*GNVVP**APSI 391
>gb|CA021658.1|CA021658 HZ40K23r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ40K23
5-PRIME, mRNA sequence
Length = 567
Score = 146 bits (314), Expect(2) = 2e-041
Identities = 55/62 (88%), Positives = 59/62 (95%)
Frame = -2 / +1
Query: 822 WISWFCTLRGNEFFCEIDDDYIQDDFNLCGLSNQVPYYDYALDLILDIESSNDDGFTEEQ 643
WISW+C LRGNEFFCE+DDDYIQDDFNLCGLS+QVPYYDYALDLILDIESS+ D FTEEQ
Sbjct: 382 WISWYCNLRGNEFFCEVDDDYIQDDFNLCGLSSQVPYYDYALDLILDIESSHGDIFTEEQ 561
Query: 642 NE 637
NE
Sbjct: 562 NE 567
Score = 81.7 bits (172), Expect(2) = 2e-022
Identities = 39/88 (44%), Positives = 47/88 (53%)
Frame = +3 / -3
Query: 639 HFAPR*TRHH*KTQCLR*DQVHNHNMAPDYSDHTG*NHPVYSHHRSHKRIHCLAMYRTMK 818
HF * HH KT+ L+*DQ HNHNM D H *+H +HHR H+R H L TMK
Sbjct: 565 HFVLL*KYHHGKTRYLK*DQEHNHNMELDC*AHKD*SHLECNHHRLHRRTHSLLGCNTMK 386
Query: 819 SRTCPLPRNHSHQNLHCQFQIPHHQTPP 902
S L ++H H LHC P + P
Sbjct: 385 SMRYLLHQSHQHLMLHCPTLTPLRSSGP 302
Score = 45.5 bits (93), Expect(2) = 2e-041
Identities = 17/26 (65%), Positives = 23/26 (88%)
Frame = -2 / +1
Query: 1047 GGAGMDRKRIKDALEKHLERSSPSTS 970
GGAG+DRKRI +AL+KHLE+++ S S
Sbjct: 157 GGAGLDRKRISEALDKHLEKAAASPS 234
Score = 44.6 bits (91), Expect(2) = 2e-022
Identities = 19/27 (70%), Positives = 20/27 (74%)
Frame = +2 / -2
Query: 968 LEVDGDDLSRCFSSASLMRFRSIPAPP 1048
+E D SRC SSASLMRFRS PAPP
Sbjct: 236 VEGDAAAFSRCLSSASLMRFRSSPAPP 156
>gb|BF624483.3|BF624483 HVSMEa0016L04f Hordeum vulgare seedling shoot EST library
HVcDNA0001 (Cold stress) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEa0016L04f, mRNA sequence
Length = 765
Score = 113 bits (241), Expect(2) = 7e-032
Identities = 46/85 (54%), Positives = 56/85 (65%)
Frame = +3 / -3
Query: 639 HFAPR*TRHH*KTQCLR*DQVHNHNMAPDYSDHTG*NHPVYSHHRSHKRIHCLAMYRTMK 818
H AP+ T K Q L ++V NH MAPD D *NHP ++HH+SH RI CLA YRT K
Sbjct: 532 HTAPQRTHRPQKRQSLGTNRVQNHKMAPDDLDPRD*NHPGHNHHQSHTRIRCLASYRTRK 353
Query: 819 SRTCPLPRNHSHQNLHCQFQIPHHQ 893
S+ CPL + HQNLHCQF+IP +
Sbjct: 352 SKMCPLLQTRKHQNLHCQFRIPRRR 278
Score = 109 bits (232), Expect(3) = 9e-032
Identities = 48/85 (56%), Positives = 52/85 (61%)
Frame = -2 / +1
Query: 897 VSDGEEFXXXXXXXXXXXXXXXXXSWISWFCTLRGNEFFCEIDDDYIQDDFNLCGLSNQV 718
VSD EEF SWISWFC+LRGNEF CEI DDY+QDDFNL GLS+Q
Sbjct: 274 VSDVEEFETDSEDSDVCGSEGEDTSWISWFCSLRGNEFLCEIGDDYVQDDFNLWGLSHQA 453
Query: 717 PYYDYALDLILDIESSNDDGFTEEQ 643
P D AL L LD SS D F+E Q
Sbjct: 454 PSCDSALGLSLDFASSEGDVFSEGQ 528
Score = 89.0 bits (188), Expect(2) = 9e-023
Identities = 40/77 (51%), Positives = 55/77 (71%)
Frame = +1 / -1
Query: 661 VIIRRLNV*DEIKCIIIIWHLITQTTQVKIILYIVIIDLTKEFIASQCTEP*NPGRVLSL 840
+ +RR V* + +C I W L+T T +++IIL I+I +LT+EF+ASQ TEP NP VLS
Sbjct: 510 IALRRGKV*GQTECRITRWRLMT*TPEIEIILDIIITNLTQEFVASQATEPGNPRCVLSF 331
Query: 841 GTTHIRIFTVSFKFLTI 891
+IRIFTVSF+FL +
Sbjct: 330 RPANIRIFTVSFEFLDV 280
Score = 44.6 bits (91), Expect(2) = 7e-032
Identities = 19/34 (55%), Positives = 25/34 (73%)
Frame = +2 / -2
Query: 965 PLEVDGDDLSRCFSSASLMRFRSIPAPPQQHQTT 1066
PLEVDGD L + SSASLMRFRS+ P + +++
Sbjct: 206 PLEVDGDGLKKRISSASLMRFRSMKEAPPKPRSS 105
Score = 41.4 bits (84), Expect(3) = 9e-032
Identities = 19/28 (67%), Positives = 21/28 (75%)
Frame = -2 / +1
Query: 1047 GGAGMDRKRIKDALEKHLERSSPSTSRG 964
G + MDRKRIK+ALE R SPSTSRG
Sbjct: 124 GASFMDRKRIKEALEILFFRPSPSTSRG 207
Score = 38.2 bits (77), Expect(2) = 9e-023
Identities = 17/29 (58%), Positives = 20/29 (68%)
Frame = +1 / -1
Query: 949 LLGHDAPGGRRRRPLQVLLERVLDALPVH 1035
LL PGG R RP + L+R+LDALPVH
Sbjct: 222 LLPGRPPGGGRGRPKEKNLQRLLDALPVH 136
Score = 24.9 bits (48), Expect(3) = 9e-032
Identities = 9/21 (42%), Positives = 15/21 (71%)
Frame = -2 / +1
Query: 957 SKERERLAAGKLPSSLGKAEV 895
S+E+E LAAG + + +GK +
Sbjct: 211 SREKEMLAAG*ISTQIGKVPI 273
>gb|BG300415.1|BG300415 HVSMEb0016P04f Hordeum vulgare seedling shoot EST library
HVcDNA0002 (Dehydration stress) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEb0016P04f, mRNA sequence
Length = 625
Score = 131 bits (281), Expect = 6e-030
Identities = 47/65 (72%), Positives = 58/65 (89%)
Frame = -2 / +3
Query: 447 KIYCPKCEELNYPRSKYQGNIDGSYFGTTFPHLFLMTYSHLKPQKPSQQYTPRVFGFKLH 268
KIYCPKCE+L YPRSK+Q N DG+YFGTTFPH+F+MT+S LKPQKP+QQY PR+FGFK+
Sbjct: 3 KIYCPKCEDLYYPRSKHQANTDGAYFGTTFPHMFMMTHSQLKPQKPAQQYVPRIFGFKVQ 182
Query: 267 KPS*Q 253
K +*+
Sbjct: 183 KKT*R 197
>gb|BF629961.2|BF629961 HVSMEb0007H14f Hordeum vulgare seedling shoot EST library
HVcDNA0002 (Dehydration stress) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEb0007H14f, mRNA sequence
Length = 500
Score = 100 bits (213), Expect(2) = 1e-027
Identities = 34/38 (89%), Positives = 37/38 (97%)
Frame = -2 / +3
Query: 822 WISWFCTLRGNEFFCEIDDDYIQDDFNLCGLSNQVPYY 709
WISW+C LRGNEFFCE+DDDYIQDDFNLCGLS+QVPYY
Sbjct: 387 WISWYCNLRGNEFFCEVDDDYIQDDFNLCGLSSQVPYY 500
Score = 45.5 bits (93), Expect(2) = 1e-027
Identities = 17/26 (65%), Positives = 23/26 (88%)
Frame = -2 / +3
Query: 1047 GGAGMDRKRIKDALEKHLERSSPSTS 970
GGAG+DRKRI +AL+KHLE+++ S S
Sbjct: 162 GGAGLDRKRISEALDKHLEKAAASPS 239
>gb|CA026092.1|CA026092 HZ54G07r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ54G07
5-PRIME, mRNA sequence
Length = 410
Score = 108 bits (231), Expect(2) = 1e-026
Identities = 41/48 (85%), Positives = 44/48 (91%)
Frame = -2 / +1
Query: 411 PRSKYQGNIDGSYFGTTFPHLFLMTYSHLKPQKPSQQYTPRVFGFKLH 268
PRSKYQGNIDG+YFGTTFPHLFLMT+ HLKPQKPSQQY PR + FKLH
Sbjct: 1 PRSKYQGNIDGAYFGTTFPHLFLMTFLHLKPQKPSQQYVPRCWFFKLH 144
Score = 99.1 bits (210), Expect(2) = 3e-025
Identities = 38/47 (80%), Positives = 42/47 (89%)
Frame = +2 / -1
Query: 269 *SLKPKTLGVYCCDGFCGFKCE*VIRKR*GNVVPKYDPSMLPWYLDL 409
*SLK + LG YCCDGFCGF+C+ VI+KR*GNVVPKY PSMLPWYLDL
Sbjct: 143 *SLKNQHLGTYCCDGFCGFRCKNVIKKR*GNVVPKYAPSMLPWYLDL 3
Score = 36.3 bits (73), Expect(2) = 3e-025
Identities = 13/26 (50%), Positives = 20/26 (76%)
Frame = +3 / -2
Query: 96 TVIISENRYNFTIVYSEAQAREFVHQ 173
T +I +NRYN + VYS+ +ARE+ +Q
Sbjct: 313 TAVIQQNRYNCSAVYSKIRAREYSNQ 236
Score = 31.8 bits (63), Expect(2) = 1e-026
Identities = 15/39 (38%), Positives = 19/39 (48%)
Frame = -2 / +1
Query: 222 HLGFRESIVAFKYCCIIDVRIREPGPRCKLL*NCICFPI 106
+LG + K +D RE CKLL NCICF +
Sbjct: 187 YLGLEMEHLGLKMLRPLDSSTRELESCCKLLSNCICFVV 303
>gb|BG414493.2|BG414493 HVSMEk0002K22f Hordeum vulgare testa/pericarp EST library
HVcDNA0013 (normal) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEk0002K22f, mRNA sequence
Length = 903
Score = 76.2 bits (160), Expect(4) = 6e-026
Identities = 28/34 (82%), Positives = 29/34 (85%)
Frame = -2 / +2
Query: 822 WISWFCTLRGNEFFCEIDDDYIQDDFNLCGLSNQ 721
WISW CTLRGNEFFCE DDYIQDDFNL GL+ Q
Sbjct: 380 WISWNCTLRGNEFFCEFYDDYIQDDFNLWGLTRQ 481
Score = 42.8 bits (87), Expect(4) = 6e-026
Identities = 16/26 (61%), Positives = 22/26 (84%)
Frame = -2 / +2
Query: 1047 GGAGMDRKRIKDALEKHLERSSPSTS 970
GGAG+DRKRI + L+KHLE+++ S S
Sbjct: 155 GGAGLDRKRITEPLDKHLEKAAASPS 232
Score = 35.0 bits (70), Expect(4) = 6e-026
Identities = 16/30 (53%), Positives = 18/30 (60%)
Frame = -2 / +2
Query: 618 EMLYGLIHARYILTSKGLAAMLEKFKNYDF 529
EM YGLIHA+ IL SKGL K + F
Sbjct: 590 EMWYGLIHAQSILPSKGLGCFPGKIQELRF 679
Score = 25.4 bits (49), Expect(4) = 6e-026
Identities = 11/17 (64%), Positives = 14/17 (82%)
Frame = -2 / +3
Query: 678 ESSNDDGFTEEQNELIE 628
ESS+ D FT+EQ EL+E
Sbjct: 528 ESSHVDIFTQEQIELLE 578
>gb|BQ658439.1|BQ658439 HB09C11w BC Hordeum vulgare subsp. vulgare cDNA clone HB09C11
3-PRIME, mRNA sequence
Length = 676
Score = 107 bits (229), Expect(2) = 1e-025
Identities = 42/47 (89%), Positives = 44/47 (93%)
Frame = -2 / -1
Query: 390 NIDGSYFGTTFPHLFLMTYSHLKPQKPSQQYTPRVFGFKLHKPS*QS 250
+IDG+YFGTTFPHLFLMTY HLKPQKPSQQY PRVFGFKLHK S*QS
Sbjct: 340 DIDGAYFGTTFPHLFLMTYPHLKPQKPSQQYVPRVFGFKLHKQS*QS 200
Score = 98.2 bits (208), Expect(2) = 6e-025
Identities = 38/45 (84%), Positives = 40/45 (88%)
Frame = +2 / +3
Query: 254 CHDGL*SLKPKTLGVYCCDGFCGFKCE*VIRKR*GNVVPKYDPSM 388
CHD L*SLKPKTLG YCCDGFCGF+C VI+KR*GNVVPKY PSM
Sbjct: 204 CHDCL*SLKPKTLGTYCCDGFCGFRCGYVIKKR*GNVVPKYAPSM 338
Score = 36.3 bits (73), Expect(2) = 6e-025
Identities = 13/26 (50%), Positives = 20/26 (76%)
Frame = +3 / +3
Query: 96 TVIISENRYNFTIVYSEAQAREFVHQ 173
T +I +NRYN + VYS+ +ARE+ +Q
Sbjct: 48 TAVIQQNRYNCSAVYSKIRAREYSNQ 125
Score = 29.5 bits (58), Expect(2) = 1e-025
Identities = 12/23 (52%), Positives = 14/23 (60%)
Frame = -2 / -2
Query: 174 IDVRIREPGPRCKLL*NCICFPI 106
+D RE CKLL NCICF +
Sbjct: 126 LDSSTRELESCCKLLSNCICFVV 58
>gb|BM101420.1|BM101420 EBpi01_SQ003_M19_R pistil, 1 DPA, no treatment, cv Optic, EBpi01
Hordeum vulgare subsp. vulgare cDNA clone
EBpi01_SQ003_M19 5', mRNA sequence
Length = 339
Score = 107 bits (228), Expect(2) = 1e-025
Identities = 42/46 (91%), Positives = 43/46 (93%)
Frame = -2 / +2
Query: 387 IDGSYFGTTFPHLFLMTYSHLKPQKPSQQYTPRVFGFKLHKPS*QS 250
IDG+YFGTTFPHLFLMTY HLKPQKPSQQY PRVFGFKLHK S*QS
Sbjct: 2 IDGAYFGTTFPHLFLMTYPHLKPQKPSQQYVPRVFGFKLHKQS*QS 139
Score = 98.2 bits (208), Expect(2) = 6e-025
Identities = 38/45 (84%), Positives = 40/45 (88%)
Frame = +2 / -1
Query: 254 CHDGL*SLKPKTLGVYCCDGFCGFKCE*VIRKR*GNVVPKYDPSM 388
CHD L*SLKPKTLG YCCDGFCGF+C VI+KR*GNVVPKY PSM
Sbjct: 135 CHDCL*SLKPKTLGTYCCDGFCGFRCGYVIKKR*GNVVPKYAPSM 1
Score = 36.3 bits (73), Expect(2) = 6e-025
Identities = 13/26 (50%), Positives = 20/26 (76%)
Frame = +3 / -1
Query: 96 TVIISENRYNFTIVYSEAQAREFVHQ 173
T +I +NRYN + VYS+ +ARE+ +Q
Sbjct: 291 TAVIQQNRYNCSAVYSKIRAREYSNQ 214
Score = 29.5 bits (58), Expect(2) = 1e-025
Identities = 12/23 (52%), Positives = 14/23 (60%)
Frame = -2 / +3
Query: 174 IDVRIREPGPRCKLL*NCICFPI 106
+D RE CKLL NCICF +
Sbjct: 213 LDSSTRELESCCKLLSNCICFVV 281
>gb|BI950575.1|BI950575 HVSMEl0021H10f Hordeum vulgare spike EST library HVcDNA0012
(Fusarium infected) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEl0021H10f, mRNA sequence
Length = 705
Score = 106 bits (226), Expect(2) = 8e-024
Identities = 41/47 (87%), Positives = 44/47 (93%)
Frame = -2 / +1
Query: 390 NIDGSYFGTTFPHLFLMTYSHLKPQKPSQQYTPRVFGFKLHKPS*QS 250
+IDG+YFGTTFPHLFLMTY HLKPQKPSQQY PRVFGFKLHK S*Q+
Sbjct: 358 DIDGAYFGTTFPHLFLMTYPHLKPQKPSQQYVPRVFGFKLHKQS*QT 498
Score = 99.6 bits (211), Expect(2) = 2e-024
Identities = 38/48 (79%), Positives = 43/48 (89%)
Frame = +2 / -2
Query: 245 LQLCHDGL*SLKPKTLGVYCCDGFCGFKCE*VIRKR*GNVVPKYDPSM 388
+++CHD L*SLKPKTLG YCCDGFCGF+C VI+KR*GNVVPKY PSM
Sbjct: 503 VKVCHDCL*SLKPKTLGTYCCDGFCGFRCGYVIKKR*GNVVPKYAPSM 360
Score = 33.1 bits (66), Expect(2) = 2e-024
Identities = 12/26 (46%), Positives = 19/26 (73%)
Frame = +3 / -2
Query: 96 TVIISENRYNFTIVYSEAQAREFVHQ 173
T +I + RY+ + VYS+ QARE+ +Q
Sbjct: 650 TAVIQQTRYSCSAVYSKIQAREYSNQ 573
Score = 24.4 bits (47), Expect(2) = 8e-024
Identities = 11/23 (47%), Positives = 13/23 (56%)
Frame = -2 / +2
Query: 174 IDVRIREPGPRCKLL*NCICFPI 106
+D RE CKLL NCI F +
Sbjct: 572 LDSSTRELESCCKLLSNCIWFVV 640
>gb|AV931983.1|AV931983 AV931983 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal0a11 5', mRNA sequence
Length = 483
Score = 84.5 bits (178), Expect(2) = 7e-023
Identities = 28/31 (90%), Positives = 30/31 (96%)
Frame = -2 / +3
Query: 822 WISWFCTLRGNEFFCEIDDDYIQDDFNLCGL 730
WISW+C LRGNEFFCE+DDDYIQDDFNLCGL
Sbjct: 390 WISWYCNLRGNEFFCEVDDDYIQDDFNLCGL 482
Score = 45.5 bits (93), Expect(2) = 7e-023
Identities = 17/26 (65%), Positives = 23/26 (88%)
Frame = -2 / +3
Query: 1047 GGAGMDRKRIKDALEKHLERSSPSTS 970
GGAG+DRKRI +AL+KHLE+++ S S
Sbjct: 165 GGAGLDRKRISEALDKHLEKAAASPS 242
>gb|AV923038.1|AV923038 AV923038 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp.
vulgare cDNA clone basd3h20 5', mRNA sequence
Length = 492
Score = 84.5 bits (178), Expect(2) = 7e-023
Identities = 28/31 (90%), Positives = 30/31 (96%)
Frame = -2 / +1
Query: 822 WISWFCTLRGNEFFCEIDDDYIQDDFNLCGL 730
WISW+C LRGNEFFCE+DDDYIQDDFNLCGL
Sbjct: 400 WISWYCNLRGNEFFCEVDDDYIQDDFNLCGL 492
Score = 45.5 bits (93), Expect(2) = 7e-023
Identities = 17/26 (65%), Positives = 23/26 (88%)
Frame = -2 / +1
Query: 1047 GGAGMDRKRIKDALEKHLERSSPSTS 970
GGAG+DRKRI +AL+KHLE+++ S S
Sbjct: 175 GGAGLDRKRISEALDKHLEKAAASPS 252
Database: Hordeum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:16 PM
Number of letters in database: 175,134,539
Number of sequences in database: 312,970
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 544,071,194
Number of Sequences: 312970
Number of extensions: 9165988
Number of successful extensions: 73022
Number of sequences better than 1.0e-020: 59
length of database: 58,378,179
effective HSP length: 53
effective length of database: 41,790,769
effective search space used: 13790953770
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)