TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 131572.2.6
(1100 letters)
Database: Hordeum_nucl_with_EST.fasta
312,970 sequences; 175,134,539 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BJ462654.1|BJ462654 BJ462654 K. Sato unpublished cDNA li... 84 9e-060
gb|AL503330.1|AL503330 AL503330 Hordeum vulgare Barke roots... 79 3e-057
gb|BM817346.1|BM817346 HC111F01_T3.ab1 HC Hordeum vulgare s... 83 8e-057
gb|BJ467760.1|BJ467760 BJ467760 K. Sato unpublished cDNA li... 84 4e-048
gb|AL503735.1|AL503735 AL503735 Hordeum vulgare Barke roots... 78 1e-046
gb|BF260928.2|BF260928 HVSMEf0023E24f Hordeum vulgare seedl... 81 3e-046
gb|BQ765268.1|BQ765268 EBro03_SQ006_N17_R root, 3 week, wat... 79 2e-044
gb|BI778623.2|BI778623 EBro07_SQ003_N10_R root, 3 week, red... 82 5e-044
gb|BI778179.2|BI778179 EBro07_SQ002_H05_R root, 3 week, red... 78 1e-043
gb|AV917258.1|AV917258 AV917258 K. Sato unpublished cDNA li... 83 4e-042
gb|CB879142.1|CB879142 HP11B09T HP Hordeum vulgare subsp. v... 88 4e-042
gb|AV922427.1|AV922427 AV922427 K. Sato unpublished cDNA li... 82 5e-042
gb|AL504415.1|AL504415 AL504415 Hordeum vulgare Barke roots... 79 2e-041
gb|CD662493.1|CD662493 UCRHV18_01ch06_b1 Drought-stressed D... 90 3e-041
gb|AV918157.1|AV918157 AV918157 K. Sato unpublished cDNA li... 78 3e-040
gb|BJ468335.1|BJ468335 BJ468335 K. Sato unpublished cDNA li... 79 7e-040
gb|AV918653.1|AV918653 AV918653 K. Sato unpublished cDNA li... 88 7e-040
gb|BJ463768.1|BJ463768 BJ463768 K. Sato unpublished cDNA li... 71 1e-039
gb|BI956453.1|BI956453 HVSMEn0003H10f Hordeum vulgare rachi... 80 1e-038
gb|AV916317.1|AV916317 AV916317 K. Sato unpublished cDNA li... 82 4e-038
gb|BJ468231.1|BJ468231 BJ468231 K. Sato unpublished cDNA li... 84 5e-038
gb|BJ463550.1|BJ463550 BJ463550 K. Sato unpublished cDNA li... 84 5e-038
gb|AV919708.1|AV919708 AV919708 K. Sato unpublished cDNA li... 88 1e-037
gb|AV921748.1|AV921748 AV921748 K. Sato unpublished cDNA li... 84 1e-037
gb|BF259348.2|BF259348 HVSMEf0019F16f Hordeum vulgare seedl... 78 2e-036
gb|BJ466406.1|BJ466406 BJ466406 K. Sato unpublished cDNA li... 78 2e-036
gb|CB879386.1|CB879386 HP02A07w HP Hordeum vulgare subsp. v... 73 3e-036
gb|BJ468058.1|BJ468058 BJ468058 K. Sato unpublished cDNA li... 79 5e-036
gb|CD663904.1|CD663904 UCRHV18_07ab10_b1 Drought-stressed D... 87 1e-035
gb|BF253494.2|BF253494 HVSMEf0001B12f Hordeum vulgare seedl... 75 2e-035
gb|BF258733.1|BF258733 HVSMEf0016I14f Hordeum vulgare seedl... 81 6e-035
gb|AV921351.1|AV921351 AV921351 K. Sato unpublished cDNA li... 79 2e-034
gb|BJ467944.1|BJ467944 BJ467944 K. Sato unpublished cDNA li... 84 2e-034
gb|BJ468232.1|BJ468232 BJ468232 K. Sato unpublished cDNA li... 84 2e-034
gb|BF254372.2|BF254372 HVSMEf0003M21f Hordeum vulgare seedl... 90 2e-034
gb|AL505819.1|AL505819 AL505819 Hordeum vulgare Barke roots... 79 5e-034
gb|CD662288.1|CD662288 UCRHV18_01aa10_b1 Drought-stressed D... 90 1e-033
gb|CD663812.1|CD663812 UCRHV18_06ch08_b1 Drought-stressed D... 90 1e-033
gb|AV918926.1|AV918926 AV918926 K. Sato unpublished cDNA li... 79 7e-033
gb|BJ463887.1|BJ463887 BJ463887 K. Sato unpublished cDNA li... 78 2e-032
gb|BF256054.2|BF256054 HVSMEf0008J16f Hordeum vulgare seedl... 75 2e-032
gb|BF255884.2|BF255884 HVSMEf0008B14f Hordeum vulgare seedl... 77 2e-032
gb|BF256832.2|BF256832 HVSMEf0011C05f Hordeum vulgare seedl... 75 5e-032
gb|BF253847.2|BF253847 HVSMEf0002E15f Hordeum vulgare seedl... 74 8e-032
gb|AV913405.1|AV913405 AV913405 K. Sato unpublished cDNA li... 78 1e-031
gb|AV918703.1|AV918703 AV918703 K. Sato unpublished cDNA li... 79 3e-031
gb|AV918077.1|AV918077 AV918077 K. Sato unpublished cDNA li... 79 3e-031
gb|AV920613.1|AV920613 AV920613 K. Sato unpublished cDNA li... 78 6e-031
gb|AV929534.1|AV929534 AV929534 K. Sato unpublished cDNA li... 78 6e-031
gb|BF620538.3|BF620538 HVSMEc0020C24f Hordeum vulgare seedl... 84 4e-030
gb|BF257415.2|BF257415 HVSMEf0012N14f Hordeum vulgare seedl... 79 5e-030
gb|AV917949.1|AV917949 AV917949 K. Sato unpublished cDNA li... 84 8e-030
gb|BF259414.3|BF259414 HVSMEf0019A18f Hordeum vulgare seedl... 73 9e-030
gb|AV931161.1|AV931161 AV931161 K. Sato unpublished cDNA li... 100 1e-029
gb|AV930320.1|AV930320 AV930320 K. Sato unpublished cDNA li... 92 6e-029
gb|AV926997.1|AV926997 AV926997 K. Sato unpublished cDNA li... 88 9e-029
gb|AV925342.1|AV925342 AV925342 K. Sato unpublished cDNA li... 88 9e-029
gb|AV925371.1|AV925371 AV925371 K. Sato unpublished cDNA li... 88 9e-029
gb|AV836790.1|AV836790 AV836790 K. Sato unpublished cDNA li... 79 1e-028
gb|BF256472.2|BF256472 HVSMEf0010B05f Hordeum vulgare seedl... 74 1e-028
gb|AL501392.1|AL501392 AL501392 Hordeum vulgare Barke roots... 81 2e-028
gb|BI777619.2|BI777619 EBro08_SQ001_A05_R root, 3 week, dro... 78 3e-028
gb|AL503613.1|AL503613 AL503613 Hordeum vulgare Barke roots... 77 4e-028
gb|AV915283.1|AV915283 AV915283 K. Sato unpublished cDNA li... 77 4e-028
gb|AV930452.1|AV930452 AV930452 K. Sato unpublished cDNA li... 90 5e-028
gb|AV918876.1|AV918876 AV918876 K. Sato unpublished cDNA li... 84 8e-028
gb|BQ662094.1|BQ662094 HR01I14u HR Hordeum vulgare subsp. v... 84 8e-028
gb|BF254577.2|BF254577 HVSMEf0004G15f Hordeum vulgare seedl... 75 1e-027
gb|AV928262.1|AV928262 AV928262 K. Sato unpublished cDNA li... 84 2e-027
gb|AL502883.1|AL502883 AL502883 Hordeum vulgare Barke roots... 82 4e-027
gb|BQ662115.1|BQ662115 HR01K01u HR Hordeum vulgare subsp. v... 84 4e-027
gb|BF257695.2|BF257695 HVSMEf0013J23f Hordeum vulgare seedl... 73 8e-027
gb|BM817329.1|BM817329 HC105E06_T3.ab1 HC Hordeum vulgare s... 82 1e-026
gb|BF256773.2|BF256773 HVSMEf0010P15f Hordeum vulgare seedl... 75 1e-026
gb|BF260521.2|BF260521 HVSMEf0022D17f Hordeum vulgare seedl... 75 1e-026
gb|BF259028.2|BF259028 HVSMEf0017H05f Hordeum vulgare seedl... 76 2e-026
gb|AL504052.1|AL504052 AL504052 Hordeum vulgare Barke roots... 82 1e-025
gb|AL450686.1|AL450686 AL450686 Hordeum vulgare Barke etiol... 79 1e-025
gb|BF253693.3|BF253693 HVSMEf0001N20f Hordeum vulgare seedl... 70 1e-025
gb|AV926277.1|AV926277 AV926277 K. Sato unpublished cDNA li... 101 2e-025
gb|CD663222.1|CD663222 UCRHV18_04db05_b1 Drought-stressed D... 79 2e-025
gb|BF631324.2|BF631324 HVSMEb0015J20f Hordeum vulgare seedl... 72 2e-025
gb|AL499854.1|AL499854 AL499854 Hordeum vulgare Barke etiol... 78 2e-025
gb|AV929439.1|AV929439 AV929439 K. Sato unpublished cDNA li... 81 2e-025
gb|AL502790.1|AL502790 AL502790 Hordeum vulgare Barke roots... 77 4e-025
gb|BF260253.2|BF260253 HVSMEf0021I05f Hordeum vulgare seedl... 87 4e-025
gb|AV931831.1|AV931831 AV931831 K. Sato unpublished cDNA li... 92 6e-025
gb|AV928022.1|AV928022 AV928022 K. Sato unpublished cDNA li... 92 6e-025
gb|AV930527.1|AV930527 AV930527 K. Sato unpublished cDNA li... 92 6e-025
gb|AL503891.1|AL503891 AL503891 Hordeum vulgare Barke roots... 71 9e-025
gb|AL503073.1|AL503073 AL503073 Hordeum vulgare Barke roots... 77 4e-024
gb|BF256951.3|BF256951 HVSMEf0011H09f Hordeum vulgare seedl... 68 2e-023
gb|CD663459.1|CD663459 UCRHV18_05cc01_b1 Drought-stressed D... 88 2e-023
gb|AV920383.1|AV920383 AV920383 K. Sato unpublished cDNA li... 81 3e-023
gb|BF260650.2|BF260650 HVSMEf0022J06f Hordeum vulgare seedl... 60 5e-023
gb|BF257975.2|BF257975 HVSMEf0014G07f Hordeum vulgare seedl... 71 5e-023
gb|AV927324.1|AV927324 AV927324 K. Sato unpublished cDNA li... 92 2e-022
gb|CD662211.1|CD662211 UCRHV18_01af07_b1 Drought-stressed D... 92 2e-022
gb|CD663190.1|CD663190 UCRHV18_04cf12_b1 Drought-stressed D... 92 2e-022
gb|AV931697.1|AV931697 AV931697 K. Sato unpublished cDNA li... 92 2e-022
gb|CD662527.1|CD662527 UCRHV18_02ba04_b1 Drought-stressed D... 92 2e-022
gb|AV925298.1|AV925298 AV925298 K. Sato unpublished cDNA li... 77 2e-022
gb|BG309181.2|BG309181 HVSMEc0004K06f Hordeum vulgare seedl... 60 3e-022
gb|AV913354.1|AV913354 AV913354 K. Sato unpublished cDNA li... 65 6e-022
gb|AV922821.1|AV922821 AV922821 K. Sato unpublished cDNA li... 65 6e-022
gb|AV913573.1|AV913573 AV913573 K. Sato unpublished cDNA li... 71 8e-022
gb|AL504343.1|AL504343 AL504343 Hordeum vulgare Barke roots... 77 2e-021
gb|AL503161.1|AL503161 AL503161 Hordeum vulgare Barke roots... 84 2e-021
gb|AV926805.1|AV926805 AV926805 K. Sato unpublished cDNA li... 62 4e-021
gb|BF620185.2|BF620185 HVSMEc0018M19f Hordeum vulgare seedl... 62 4e-021
gb|AV930495.1|AV930495 AV930495 K. Sato unpublished cDNA li... 92 4e-021
gb|BF253643.2|BF253643 HVSMEf0001L12f Hordeum vulgare seedl... 68 5e-021
gb|BQ765323.1|BQ765323 EBro03_SQ006_H23_R root, 3 week, wat... 101 6e-021
gb|AL501157.1|AL501157 AL501157 Hordeum vulgare Barke roots... 77 7e-021
gb|AL504425.1|AL504425 AL504425 Hordeum vulgare Barke roots... 101 8e-021
>gb|BJ462654.1|BJ462654 BJ462654 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags29l10 5', mRNA sequence
Length = 720
Score = 84.5 bits (178), Expect(5) = 9e-060
Identities = 35/59 (59%), Positives = 42/59 (71%)
Frame = +2 / +2
Query: 635 MLETQLLMDIGMMTMTKGRQHDEKEWRQLFTKAGFSEYKILKEFGTRVAFEVYP*DIYL 811
M E QLLMD+ MM T+G Q DE W +LF KAGF++YKI+K+ G R EVYP*DI L
Sbjct: 539 MFEAQLLMDMLMMVNTRGGQRDENHWCELFKKAGFTDYKIVKKLGARSVIEVYP*DIVL 715
Score = 82.2 bits (173), Expect(5) = 9e-060
Identities = 33/62 (53%), Positives = 44/62 (70%)
Frame = +2 / +2
Query: 443 INYVEGDMFSFIPPAQTXXXXXXXXXXTDEECVKLLAQCRKAIPSRKDGGKVIIGDIMID 622
INYV GD+F +PP+Q +DE+CVK+LAQCRKAIP R++GGKVII +I++
Sbjct: 341 INYVAGDLFHTVPPSQVVMLKLVLHFWSDEDCVKILAQCRKAIPPREEGGKVIIIEIVVG 520
Query: 623 HS 628
S
Sbjct: 521 PS 526
Score = 70.7 bits (148), Expect(5) = 9e-060
Identities = 28/64 (43%), Positives = 36/64 (56%)
Frame = +2 / +2
Query: 146 SPFEELHGATLFHESMGSLDADFHDMASDALDTHDNFGVEMALREFRDLFEGIQSMTYCC 325
SPFEE G LF E LD + + + L HDN G+ LRE D+F+G+ S+T CC
Sbjct: 53 SPFEEKFGVPLFDEKTALLDQELDSVCNQGLAAHDNLGIATILRECGDIFKGLDSLTDCC 232
Query: 326 GNFG 337
G G
Sbjct: 233 GGDG 244
Score = 68.4 bits (143), Expect(4) = 1e-031
Identities = 33/57 (57%), Positives = 39/57 (68%)
Frame = -3 / -1
Query: 612 MSPIITFPPSFREGIAFRH*ARSLTHSSSVRWCSTSFSTTV*AGGMKLNMSPST*FI 442
+S IITFPPS R G+AF H AR T SSS++ CSTS S T * GG N SP+T* +
Sbjct: 510 ISMIITFPPSSRGGMAFLHWARIFTQSSSLQKCSTSLSITT*DGGTVWNRSPAT*LM 340
Score = 55.1 bits (114), Expect(4) = 3e-021
Identities = 28/58 (48%), Positives = 32/58 (55%)
Frame = -2 / -3
Query: 619 NHNVTDYNFPAILP*RNRLPALSQKLDALLIGQVVQHKL*HDSLSRWNETEHVTFDIV 446
NHN+ DY +LP RN L AL A+LI V HKL H L W+ E VT DIV
Sbjct: 517 NHNLYDYYLSPLLPRRNGLSALG*DFHAILITPKV*HKLEHHHLRWWDGVEQVTRDIV 344
Score = 52.8 bits (109), Expect(4) = 1e-031
Identities = 29/57 (50%), Positives = 34/57 (59%)
Frame = -3 / -1
Query: 804 ISHG*TSKATRVPNSLRILYSLNPALVKS*RHSFSSCCRPFVMVIMPMSIRS*VSSI 634
IS+G*TS R PN IL S+NPA + S FSS P V IM +SIRS S+I
Sbjct: 708 ISYG*TSMTDRAPNFFTIL*SVNPAFLNSSHQ*FSSR*PPLVFTIMSISIRSWASNI 538
Score = 51.0 bits (105), Expect(4) = 3e-021
Identities = 22/56 (39%), Positives = 32/56 (57%)
Frame = -2 / -3
Query: 802 ISRIDFEGNTSSKFLENLVFAEPCFGEELTPFFFVVLSSFCHGHHADVHQELSFQH 635
I R+D + + S+FL N V +E + LTP F+ L+ HH +HQEL F+H
Sbjct: 706 ILRVDLDD*SGSQFLHNFVVSESRLLK*LTPVIFITLTPSRVHHHEHIHQELGFKH 539
Score = 42.3 bits (86), Expect(5) = 9e-060
Identities = 18/35 (51%), Positives = 20/35 (57%)
Frame = +2 / +2
Query: 335 GDDKGARAIAKAFPHIKCTVLXXXXXXXXXXXDGV 439
GD ARA+ KA+PHIKCTVL DGV
Sbjct: 236 GDGTTARALVKAYPHIKCTVLDLPKVVEKAPADGV 340
Score = 37.7 bits (76), Expect(4) = 1e-031
Identities = 22/60 (36%), Positives = 29/60 (48%)
Frame = -3 / -1
Query: 324 QQ*VMDWIPSNKSLNSRSAISTPKLSWVSKASLAMSWKSASRLPMLSWNRVAPCSSSNGD 145
QQ V + P S +SRS ++ P+LSW +K L S S + S P SS GD
Sbjct: 231 QQSVRESSPLKMSPHSRSMVAIPRLSWAAKPWLQTESSS*SSRAVFSSKSGTPNFSSKGD 52
Score = 33.6 bits (67), Expect(4) = 1e-031
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = -3 / -1
Query: 444 IFTPSAGLAAMILGGASTVHFMCG 373
+ TPSAG + G ++TVH MCG
Sbjct: 345 LMTPSAGAFSTTFGRSNTVHLMCG 274
Score = 26.3 bits (51), Expect(4) = 3e-021
Identities = 17/65 (26%), Positives = 26/65 (40%)
Frame = -2 / -3
Query: 337 TKVTAAVGHGLDPLEQVPELPQRHLDXXXXXXXXXXXXXXXEICVEAAHALVEQSRPVQL 158
T AAVG G+ PLE V + D ++ +E +++ L
Sbjct: 244 TIAAAAVGQGVKPLEDVTAFAEYGSDPKVVVGSQTLVANRVKLLIE*GSFFIKEWHTELL 65
Query: 157 LER*R 143
LER*+
Sbjct: 64 LER*Q 50
Score = 26.3 bits (51), Expect(5) = 9e-060
Identities = 9/18 (50%), Positives = 11/18 (61%)
Frame = +2 / +1
Query: 116 AEWFRKDTATSPFEELHG 169
A+WF+KDT TS G
Sbjct: 13 ADWFKKDTXTSSVVTFRG 66
Score = 24.0 bits (46), Expect(4) = 3e-021
Identities = 8/17 (47%), Positives = 10/17 (58%)
Frame = -1 / -2
Query: 404 EGPAQCILCVGRPWQWP 354
EGP QC C +P + P
Sbjct: 305 EGPTQCT*CADKP*RGP 255
>gb|AL503330.1|AL503330 AL503330 Hordeum vulgare Barke roots Hordeum vulgare subsp. vulgare
cDNA clone HW01K22T 5', mRNA sequence
Length = 700
Score = 79.4 bits (167), Expect(5) = 3e-057
Identities = 29/64 (45%), Positives = 43/64 (67%)
Frame = +2 / +1
Query: 146 SPFEELHGATLFHESMGSLDADFHDMASDALDTHDNFGVEMALREFRDLFEGIQSMTYCC 325
S FE++H A+LF ES +LD + + +D L+ HDN G+ +RE DLF+G++S+T CC
Sbjct: 88 SVFEDVHSASLFDESTAALDPELDALVTDGLEAHDNLGIGTIMRECHDLFKGLESLTDCC 267
Query: 326 GNFG 337
G G
Sbjct: 268 GGDG 279
Score = 77.6 bits (163), Expect(5) = 3e-057
Identities = 29/62 (46%), Positives = 43/62 (69%)
Frame = +2 / +1
Query: 443 INYVEGDMFSFIPPAQTXXXXXXXXXXTDEECVKLLAQCRKAIPSRKDGGKVIIGDIMID 622
+NYV GD+F +P AQ +D++CVK+L QC+ AIPSR++GGKVI+ DI+++
Sbjct: 376 VNYVAGDLFHTVPKAQAVMLKLVLHHWSDDDCVKILTQCKNAIPSREEGGKVIVIDIVVE 555
Query: 623 HS 628
S
Sbjct: 556 PS 561
Score = 75.8 bits (159), Expect(5) = 2e-037
Identities = 35/58 (60%), Positives = 40/58 (68%)
Frame = -3 / -3
Query: 621 SIIMSPIITFPPSFREGIAFRH*ARSLTHSSSVRWCSTSFSTTV*AGGMKLNMSPST* 448
S +S ITFPPS REG+AF H R T SSS++WCSTSFS T *A G N SP+T*
Sbjct: 554 STTISMTITFPPSSREGMAFLHWVRIFTQSSSLQWCSTSFSITA*AFGTVWNRSPAT* 381
Score = 64.8 bits (135), Expect(5) = 3e-057
Identities = 24/42 (57%), Positives = 31/42 (73%)
Frame = +2 / +1
Query: 635 MLETQLLMDIGMMTMTKGRQHDEKEWRQLFTKAGFSEYKILK 760
M E Q LMD+ M+ T+GRQ E +WR LF KAGF++YKI+K
Sbjct: 574 MFEAQTLMDMLMLVFTRGRQRSENDWRDLFMKAGFTDYKIIK 699
Score = 55.1 bits (114), Expect(5) = 1e-022
Identities = 24/58 (41%), Positives = 35/58 (60%)
Frame = -2 / -2
Query: 619 NHNVTDYNFPAILP*RNRLPALSQKLDALLIGQVVQHKL*HDSLSRWNETEHVTFDIV 446
+H++ D + P++L RN + L L +++ VVQHKL H LS W+ E VT DIV
Sbjct: 552 DHDINDNHLPSLLTGRNGILTLG*DLHTIVVTPVVQHKLQHHCLSLWDGVEQVTSDIV 379
Score = 49.6 bits (102), Expect(5) = 2e-037
Identities = 24/60 (40%), Positives = 34/60 (56%)
Frame = -3 / -3
Query: 324 QQ*VMDWIPSNKSLNSRSAISTPKLSWVSKASLAMSWKSASRLPMLSWNRVAPCSSSNGD 145
QQ V D P +S +SR + P+LSW S+ S+ + S S+ +LS A C+SSN D
Sbjct: 266 QQSVRDSSPLKRSWHSRMMVPIPRLSWASRPSVTSASSSGSKAAVLSSKSDALCTSSNTD 87
Score = 44.1 bits (90), Expect(5) = 2e-037
Identities = 16/42 (38%), Positives = 24/42 (57%)
Frame = -2 / -2
Query: 760 LENLVFAEPCFGEELTPFFFVVLSSFCHGHHADVHQELSFQH 635
L++ V EPCF EE++P F L++ H VH+ L +H
Sbjct: 699 LDDFVVGEPCFHEEVSPVIFATLTASREHKHEHVHESLGLKH 574
Score = 41.4 bits (84), Expect(5) = 3e-057
Identities = 16/21 (76%), Positives = 17/21 (80%)
Frame = +2 / +1
Query: 335 GDDKGARAIAKAFPHIKCTVL 397
GD K ARAI KA PH+KCTVL
Sbjct: 271 GDGKTARAITKAHPHVKCTVL 333
Score = 35.4 bits (71), Expect(5) = 1e-022
Identities = 19/36 (52%), Positives = 22/36 (61%)
Frame = -3 / -3
Query: 759 LRILYSLNPALVKS*RHSFSSCCRPFVMVIMPMSIR 652
L IL S+NPA +K R SFS RP V M MS+R
Sbjct: 698 LMIL*SVNPAFMKRSRQSFSLR*RPLVNTSMSMSMR 591
Score = 34.1 bits (68), Expect(5) = 3e-057
Identities = 11/18 (61%), Positives = 15/18 (83%)
Frame = +2 / +1
Query: 83 SSRYIEPAIGLAEWFRKD 136
S Y+E A+G+AEWF+KD
Sbjct: 16 SPHYMEAALGMAEWFKKD 69
Score = 32.2 bits (64), Expect(5) = 2e-037
Identities = 12/27 (44%), Positives = 14/27 (51%)
Frame = -1 / -1
Query: 416 Q*SWEGPAQCILCVGRPWQWPWHPCHH 336
+* W PA+C G PW WP HH
Sbjct: 352 R*PWGDPARCT*RAGVPW*WPSLSFHH 272
Score = 31.8 bits (63), Expect(5) = 1e-022
Identities = 21/69 (30%), Positives = 29/69 (42%)
Frame = -2 / -2
Query: 358 GPGTLVITKVTAAVGHGLDPLEQVPELPQRHLDXXXXXXXXXXXXXXXEICVEAAHALVE 179
G G ++ T AV L PLE+V L D E+ V+ ALVE
Sbjct: 300 GDGPRCLSITTTAVCERLKPLEEVMALTHDGADTQVVVGFQTIGDQRVELWVQGRGALVE 121
Query: 178 QSRPVQLLE 152
+ R + +LE
Sbjct: 120 ERRAMHVLE 94
Score = 30.4 bits (60), Expect(5) = 1e-022
Identities = 12/22 (54%), Positives = 15/22 (68%)
Frame = -3 / -3
Query: 438 TPSAGLAAMILGGASTVHFMCG 373
T S G+ +M LG +STVH CG
Sbjct: 374 TQSDGVFSMTLGRSSTVHLTCG 309
Score = 27.2 bits (53), Expect(5) = 2e-037
Identities = 12/15 (80%), Positives = 12/15 (80%)
Frame = -3 / -3
Query: 135 SFLNHSASPIAGSM* 91
SFLNHSA P A SM*
Sbjct: 68 SFLNHSAIPSAASM* 24
Score = 24.9 bits (48), Expect(5) = 1e-022
Identities = 12/24 (50%), Positives = 12/24 (50%)
Frame = -2 / -2
Query: 142 GRVLPEPLGQPYCRLDVARRGAGE 71
G VL EPLG P V RR E
Sbjct: 75 GDVLLEPLGHPQRGFHVVRRPGAE 4
>gb|BM817346.1|BM817346 HC111F01_T3.ab1 HC Hordeum vulgare subsp. vulgare cDNA clone
HC111F01_T3.ab1 similar to Hexaprenyldihydroxybenzoate
methyltransferase,Apigenin
4'-O-methyltransferase,[Myelin basic protein]-arginine
N-methyltransferase,Catechol
O-methyltransferase,Glycoprotein-fucosylgalactoside
alpha-galactosyltransferase,, mRNA sequence
Length = 905
Score = 83.1 bits (175), Expect(5) = 8e-057
Identities = 30/64 (46%), Positives = 44/64 (68%)
Frame = +2 / +3
Query: 146 SPFEELHGATLFHESMGSLDADFHDMASDALDTHDNFGVEMALREFRDLFEGIQSMTYCC 325
SPFE++HGA+LF ES LD + ++ ++ L HDN G+ +RE DLF+G++S+T CC
Sbjct: 111 SPFEDVHGASLFDESTALLDKELDELVTEGLAAHDNLGIGTIMRECHDLFKGLESLTDCC 290
Query: 326 GNFG 337
G G
Sbjct: 291 GGDG 302
Score = 71.6 bits (150), Expect(5) = 8e-057
Identities = 29/62 (46%), Positives = 41/62 (66%)
Frame = +2 / +3
Query: 443 INYVEGDMFSFIPPAQTXXXXXXXXXXTDEECVKLLAQCRKAIPSRKDGGKVIIGDIMID 622
+N V GD+F +P +Q +DE+CVK+L+QCR AIPS ++GGKVII DI++
Sbjct: 399 VNCVAGDLFHSVPKSQAVMLKLVLHHWSDEDCVKILSQCRDAIPSHEEGGKVIIIDIVVG 578
Query: 623 HS 628
S
Sbjct: 579 PS 584
Score = 65.7 bits (137), Expect(5) = 8e-057
Identities = 26/47 (55%), Positives = 33/47 (70%)
Frame = +2 / +3
Query: 635 MLETQLLMDIGMMTMTKGRQHDEKEWRQLFTKAGFSEYKILKEFGTR 775
M E QLLMD+ M+ TK RQ E +W +LF KAGFS+YKI+K+ R
Sbjct: 597 MFEAQLLMDMLMLVNTKSRQRTENDWHELFMKAGFSDYKIVKKLRAR 737
Score = 64.8 bits (135), Expect(5) = 2e-040
Identities = 30/54 (55%), Positives = 38/54 (70%)
Frame = -3 / -2
Query: 612 MSPIITFPPSFREGIAFRH*ARSLTHSSSVRWCSTSFSTTV*AGGMKLNMSPST 451
+S +ITFPPS EG+A H* + LT SSS++WCSTS S T * G + N SP+T
Sbjct: 568 ISIMITFPPSSCEGMASLH*DKILTQSSSLQWCSTSLSITA*DLGTEWNKSPAT 407
Score = 57.4 bits (119), Expect(5) = 2e-040
Identities = 27/60 (45%), Positives = 35/60 (58%)
Frame = -3 / -2
Query: 324 QQ*VMDWIPSNKSLNSRSAISTPKLSWVSKASLAMSWKSASRLPMLSWNRVAPCSSSNGD 145
QQ V D P +S +SR + P+LSW + S+ S S SR +LS APC+SSNGD
Sbjct: 289 QQSVRDSSPLKRSWHSRMIVPMPRLSWAASPSVTSSSSSLSRSAVLSSKSDAPCTSSNGD 110
Score = 56.5 bits (117), Expect(5) = 2e-040
Identities = 21/45 (46%), Positives = 28/45 (62%)
Frame = -2 / -1
Query: 769 SKFLENLVFAEPCFGEELTPFFFVVLSSFCHGHHADVHQELSFQH 635
S+FL+NL+ EPCF EEL P L++ C H VHQ+L +H
Sbjct: 731 SEFLDNLIVTEPCFHEELMPVILSTLTALCVHKHEHVHQKLGLKH 597
Score = 53.8 bits (111), Expect(6) = 7e-026
Identities = 25/58 (43%), Positives = 35/58 (60%)
Frame = -2 / -1
Query: 619 NHNVTDYNFPAILP*RNRLPALSQKLDALLIGQVVQHKL*HDSLSRWNETEHVTFDIV 446
+HN+ + + ++L *RN +P L Q LD +L+ VVQHKL H L + E VT D V
Sbjct: 575 HHNIYNDHLSSLLM*RNGIPTLRQDLDTVLVTPVVQHKLEHHRLRLGDGVEQVTSDTV 402
Score = 40.5 bits (82), Expect(5) = 8e-057
Identities = 17/35 (48%), Positives = 19/35 (54%)
Frame = +2 / +3
Query: 335 GDDKGARAIAKAFPHIKCTVLXXXXXXXXXXXDGV 439
GD ARAI KA PH+KCTVL DG+
Sbjct: 294 GDGTTARAITKAHPHVKCTVLDLPKVIDKAPSDGI 398
Score = 39.6 bits (80), Expect(6) = 7e-026
Identities = 24/47 (51%), Positives = 28/47 (59%)
Frame = -3 / -2
Query: 774 RVPNSLRILYSLNPALVKS*RHSFSSCCRPFVMVIMPMSIRS*VSSI 634
R + L IL SLNPA +KS SFS R FV M MSI+S S+I
Sbjct: 736 RARSFLTIL*SLNPAFMKSSCQSFSVR*RLFVFTSMSMSIKSWASNI 596
Score = 35.0 bits (70), Expect(5) = 8e-057
Identities = 13/19 (68%), Positives = 15/19 (78%)
Frame = +2 / +2
Query: 80 TSSRYIEPAIGLAEWFRKD 136
TS Y E A+GLA+WFRKD
Sbjct: 35 TSPFYTEAALGLADWFRKD 91
Score = 31.8 bits (63), Expect(5) = 2e-040
Identities = 10/18 (55%), Positives = 11/18 (61%)
Frame = -1 / -3
Query: 407 WEGPAQCILCVGRPWQWP 354
WEGPA+C PW WP
Sbjct: 366 WEGPARCT*HADVPW*WP 313
Score = 30.4 bits (60), Expect(6) = 7e-026
Identities = 13/23 (56%), Positives = 15/23 (65%)
Frame = -2 / -1
Query: 328 TAAVGHGLDPLEQVPELPQRHLD 260
TAAVG L+PLE+V LP D
Sbjct: 293 TAAVGERLEPLEEVMALPHDRAD 225
Score = 29.5 bits (58), Expect(5) = 2e-040
Identities = 13/24 (54%), Positives = 17/24 (70%)
Frame = -3 / -3
Query: 135 SFLNHSASPIAGSM*RDEVQVSTK 64
SFLN SASP A S+*+ +V S +
Sbjct: 90 SFLNQSASPSAASV*KGDVAASCR 19
Score = 29.5 bits (58), Expect(6) = 7e-026
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = -3 / -2
Query: 435 PSAGLAAMILGGASTVHFMCG 373
PS G ++ LG +STVH CG
Sbjct: 394 PSDGALSITLGRSSTVHLTCG 332
Score = 26.3 bits (51), Expect(6) = 7e-026
Identities = 12/21 (57%), Positives = 13/21 (61%)
Frame = -2 / -2
Query: 136 VLPEPLGQPYCRLDVARRGAG 74
VLPEP+GQP L V R G
Sbjct: 91 VLPEPVGQPQRGLRVEGRRRG 29
Score = 26.3 bits (51), Expect(6) = 7e-026
Identities = 10/19 (52%), Positives = 11/19 (57%)
Frame = -1 / -3
Query: 200 GCPCSRGTESPRAAPRTVT 144
G PCSR + A PRT T
Sbjct: 165 GAPCSRRRATRHARPRTAT 109
>gb|BJ467760.1|BJ467760 BJ467760 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags29l10 3', mRNA sequence
Length = 779
Score = 84.5 bits (178), Expect(4) = 4e-048
Identities = 35/59 (59%), Positives = 42/59 (71%)
Frame = +2 / -2
Query: 635 MLETQLLMDIGMMTMTKGRQHDEKEWRQLFTKAGFSEYKILKEFGTRVAFEVYP*DIYL 811
M E QLLMD+ MM T+G Q DE W +LF KAGF++YKI+K+ G R EVYP*DI L
Sbjct: 370 MFEAQLLMDMLMMVNTRGGQRDENHWCELFKKAGFTDYKIVKKLGARSVIEVYP*DIVL 194
Score = 82.2 bits (173), Expect(4) = 4e-048
Identities = 33/62 (53%), Positives = 44/62 (70%)
Frame = +2 / -2
Query: 443 INYVEGDMFSFIPPAQTXXXXXXXXXXTDEECVKLLAQCRKAIPSRKDGGKVIIGDIMID 622
INYV GD+F +PP+Q +DE+CVK+LAQCRKAIP R++GGKVII +I++
Sbjct: 568 INYVAGDLFHTVPPSQVVMLKLVLHFWSDEDCVKILAQCRKAIPPREEGGKVIIIEIVVG 389
Query: 623 HS 628
S
Sbjct: 388 PS 383
Score = 68.4 bits (143), Expect(4) = 3e-028
Identities = 33/57 (57%), Positives = 39/57 (68%)
Frame = -3 / +3
Query: 612 MSPIITFPPSFREGIAFRH*ARSLTHSSSVRWCSTSFSTTV*AGGMKLNMSPST*FI 442
+S IITFPPS R G+AF H AR T SSS++ CSTS S T * GG N SP+T* +
Sbjct: 399 ISMIITFPPSSRGGMAFLHWARIFTQSSSLQKCSTSLSITT*DGGTVWNRSPAT*LM 569
Score = 54.7 bits (113), Expect(4) = 3e-028
Identities = 30/65 (46%), Positives = 38/65 (58%)
Frame = -3 / +3
Query: 828 MHTYVCKYISHG*TSKATRVPNSLRILYSLNPALVKS*RHSFSSCCRPFVMVIMPMSIRS 649
++ Y+ IS+G*TS R PN IL S+NPA + S FSS P V IM +SIRS
Sbjct: 177 LYFYL*STISYG*TSMTDRAPNFFTIL*SVNPAFLNSSHQ*FSSR*PPLVFTIMSISIRS 356
Query: 648 *VSSI 634
S+I
Sbjct: 357 WASNI 371
Score = 42.3 bits (86), Expect(4) = 4e-048
Identities = 18/35 (51%), Positives = 20/35 (57%)
Frame = +2 / -2
Query: 335 GDDKGARAIAKAFPHIKCTVLXXXXXXXXXXXDGV 439
GD ARA+ KA+PHIKCTVL DGV
Sbjct: 673 GDGTTARALVKAYPHIKCTVLDLPKVVEKAPADGV 569
Score = 39.6 bits (80), Expect(4) = 4e-048
Identities = 14/29 (48%), Positives = 19/29 (65%)
Frame = +2 / -2
Query: 251 NFGVEMALREFRDLFEGIQSMTYCCGNFG 337
N G+ LRE D+F+G+ S+T CCG G
Sbjct: 751 NLGIATILRECGDIFKGLDSLTDCCGGDG 665
Score = 33.6 bits (67), Expect(4) = 3e-028
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = -3 / +3
Query: 444 IFTPSAGLAAMILGGASTVHFMCG 373
+ TPSAG + G ++TVH MCG
Sbjct: 564 LMTPSAGAFSTTFGRSNTVHLMCG 635
Score = 24.0 bits (46), Expect(4) = 3e-028
Identities = 10/17 (58%), Positives = 11/17 (64%)
Frame = -2 / +2
Query: 337 TKVTAAVGHGLDPLEQV 287
T AAVG G+ PLE V
Sbjct: 665 TIAAAAVGQGVKPLEDV 715
>gb|AL503735.1|AL503735 AL503735 Hordeum vulgare Barke roots Hordeum vulgare subsp. vulgare
cDNA clone HW03D24T 5', mRNA sequence
Length = 700
Score = 77.6 bits (163), Expect(4) = 1e-046
Identities = 29/62 (46%), Positives = 43/62 (69%)
Frame = +2 / +1
Query: 443 INYVEGDMFSFIPPAQTXXXXXXXXXXTDEECVKLLAQCRKAIPSRKDGGKVIIGDIMID 622
+NYV GD+F +P AQ +D++CVK+L QC+ AIPSR++GGKVI+ DI+++
Sbjct: 193 VNYVAGDLFHTVPKAQAVMLKLVLHHWSDDDCVKILTQCKNAIPSREEGGKVIVIDIVVE 372
Query: 623 HS 628
S
Sbjct: 373 PS 378
Score = 77.1 bits (162), Expect(4) = 1e-046
Identities = 30/57 (52%), Positives = 39/57 (68%)
Frame = +2 / +1
Query: 635 MLETQLLMDIGMMTMTKGRQHDEKEWRQLFTKAGFSEYKILKEFGTRVAFEVYP*DI 805
M E Q LMD+ M+ T+GRQ E +WR LF KAGF++YKI+K+ G R EVY * +
Sbjct: 391 MFEAQTLMDMLMLVFTRGRQRSENDWRDLFMKAGFTDYKIIKKMGARGVIEVYK*SL 561
Score = 75.8 bits (159), Expect(3) = 4e-027
Identities = 35/58 (60%), Positives = 40/58 (68%)
Frame = -3 / -3
Query: 621 SIIMSPIITFPPSFREGIAFRH*ARSLTHSSSVRWCSTSFSTTV*AGGMKLNMSPST* 448
S +S ITFPPS REG+AF H R T SSS++WCSTSFS T *A G N SP+T*
Sbjct: 371 STTISMTITFPPSSREGMAFLHWVRIFTQSSSLQWCSTSFSITA*AFGTVWNRSPAT* 198
Score = 51.5 bits (106), Expect(3) = 4e-027
Identities = 18/53 (33%), Positives = 30/53 (56%)
Frame = -2 / -2
Query: 793 IDFEGNTSSKFLENLVFAEPCFGEELTPFFFVVLSSFCHGHHADVHQELSFQH 635
+D + + + FL++ V EPCF EE++P F L++ H VH+ L +H
Sbjct: 549 VDLDDTSCTHFLDDFVVGEPCFHEEVSPVIFATLTASREHKHEHVHESLGLKH 391
Score = 47.3 bits (97), Expect(4) = 1e-046
Identities = 16/31 (51%), Positives = 22/31 (70%)
Frame = +2 / +1
Query: 245 HDNFGVEMALREFRDLFEGIQSMTYCCGNFG 337
HDN G+ +RE DLF+G++S+T CCG G
Sbjct: 4 HDNLGIGTIMRECHDLFKGLESLTDCCGGDG 96
Score = 41.4 bits (84), Expect(4) = 1e-046
Identities = 16/21 (76%), Positives = 17/21 (80%)
Frame = +2 / +1
Query: 335 GDDKGARAIAKAFPHIKCTVL 397
GD K ARAI KA PH+KCTVL
Sbjct: 88 GDGKTARAITKAHPHVKCTVL 150
Score = 32.2 bits (64), Expect(3) = 4e-027
Identities = 12/27 (44%), Positives = 14/27 (51%)
Frame = -1 / -1
Query: 416 Q*SWEGPAQCILCVGRPWQWPWHPCHH 336
+* W PA+C G PW WP HH
Sbjct: 169 R*PWGDPARCT*RAGVPW*WPSLSFHH 89
>gb|BF260928.2|BF260928 HVSMEf0023E24f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEf0023E24f, mRNA sequence
Length = 729
Score = 80.8 bits (170), Expect(4) = 3e-046
Identities = 32/62 (51%), Positives = 43/62 (69%)
Frame = +2 / +1
Query: 443 INYVEGDMFSFIPPAQTXXXXXXXXXXTDEECVKLLAQCRKAIPSRKDGGKVIIGDIMID 622
+NYV GD+F +PPAQ +DE+C+ +LAQC+KAIPSR+ GGKVII DI++
Sbjct: 517 VNYVAGDLFHTVPPAQAVMLKLVLHFWSDEDCINILAQCKKAIPSREMGGKVIIIDIVLG 696
Query: 623 HS 628
S
Sbjct: 697 SS 702
Score = 74.8 bits (157), Expect(4) = 3e-046
Identities = 31/64 (48%), Positives = 40/64 (62%)
Frame = +2 / +1
Query: 146 SPFEELHGATLFHESMGSLDADFHDMASDALDTHDNFGVEMALREFRDLFEGIQSMTYCC 325
SPFE +H A F ESM LD + + +AL HD+ G+ LRE R LF+G+QS+T CC
Sbjct: 229 SPFEHVHAAAPFDESMTLLDPETDKLFYEALAAHDHMGIGTVLRECRGLFDGLQSLTDCC 408
Query: 326 GNFG 337
G G
Sbjct: 409 GGDG 420
Score = 65.2 bits (136), Expect(4) = 5e-027
Identities = 32/55 (58%), Positives = 37/55 (67%)
Frame = -3 / -2
Query: 612 MSPIITFPPSFREGIAFRH*ARSLTHSSSVRWCSTSFSTTV*AGGMKLNMSPST* 448
MS +ITFPP EG+AF H*AR L SSS++ C TS S T *AGG SP+T*
Sbjct: 686 MSMMITFPPISLEGMAFLH*ARMLMQSSSLQKCRTSLSITA*AGGTVWKRSPAT* 522
Score = 48.7 bits (100), Expect(4) = 5e-027
Identities = 26/60 (43%), Positives = 32/60 (53%)
Frame = -3 / -2
Query: 324 QQ*VMDWIPSNKSLNSRSAISTPKLSWVSKASLAMSWKSASRLPMLSWNRVAPCSSSNGD 145
QQ V D PSN+ +SRS + P SW ++AS S S MLS A C+ SNGD
Sbjct: 407 QQSVSDCRPSNRPRHSRSTVPIPIWSWAARAS*NSLSVSGSSSVMLSSKGAAACTCSNGD 228
Score = 44.6 bits (91), Expect(4) = 3e-046
Identities = 16/43 (37%), Positives = 27/43 (62%)
Frame = +2 / +1
Query: 8 VSYLLVEGIPHEDHMNHTSFVLTCTSSRYIEPAIGLAEWFRKD 136
+SY+LV+G+ + +F L TS ++E +GLA+WF+ D
Sbjct: 82 LSYILVDGVLIDGEARQVTFPLAVTSRYHMESGLGLADWFKND 210
Score = 41.8 bits (85), Expect(4) = 3e-046
Identities = 19/35 (54%), Positives = 19/35 (54%)
Frame = +2 / +1
Query: 335 GDDKGARAIAKAFPHIKCTVLXXXXXXXXXXXDGV 439
GD ARAI KAFPHIKC VL DGV
Sbjct: 412 GDGTTARAIVKAFPHIKCNVLDLPKVIDKVPSDGV 516
Score = 32.7 bits (65), Expect(4) = 5e-027
Identities = 20/44 (45%), Positives = 23/44 (52%)
Frame = -3 / -2
Query: 138 VSFLNHSASPIAGSM*RDEVQVSTKEVWFMWSS*GMPSTRR*ET 7
+SFLN SA P SM* EV S K S PSTR *++
Sbjct: 212 LSFLNQSARPRPDSM*YREVTASGKVTCLASPSMSTPSTRM*DS 81
Score = 29.9 bits (59), Expect(4) = 5e-027
Identities = 10/23 (43%), Positives = 12/23 (52%)
Frame = -1 / -3
Query: 401 GPAQCILCVGRPWQWPWHPCHHQ 333
GP C GRP +WP HH+
Sbjct: 478 GPTHCT*YAGRP*RWPLPSSHHR 410
>gb|BQ765268.1|BQ765268 EBro03_SQ006_N17_R root, 3 week, waterlogged, cv Optic, EBro03
Hordeum vulgare subsp. vulgare cDNA clone
EBro03_SQ006_N17 5', mRNA sequence
Length = 615
Score = 79.0 bits (166), Expect(4) = 2e-044
Identities = 29/59 (49%), Positives = 41/59 (69%)
Frame = +2 / +3
Query: 443 INYVEGDMFSFIPPAQTXXXXXXXXXXTDEECVKLLAQCRKAIPSRKDGGKVIIGDIMI 619
+ YV GD+F +PPAQ +DE+C+K+LAQCRKA+P R+ GGKVI+ DI++
Sbjct: 318 VKYVSGDLFHVVPPAQAVLLKLVLHFWSDEDCIKILAQCRKAVPPREAGGKVIVIDIVL 494
Score = 79.0 bits (166), Expect(4) = 2e-044
Identities = 30/64 (46%), Positives = 43/64 (67%)
Frame = +2 / +3
Query: 146 SPFEELHGATLFHESMGSLDADFHDMASDALDTHDNFGVEMALREFRDLFEGIQSMTYCC 325
SPFE++HGA +F ESM LD + + DA+ HD+ G+ LR+ R+LFEG++S+T C
Sbjct: 21 SPFEDVHGAAIFEESMALLDPEMDQLIHDAVAAHDHMGIGPVLRQCRELFEGLESLTDCG 200
Query: 326 GNFG 337
G G
Sbjct: 201 GGDG 212
Score = 64.3 bits (134), Expect(4) = 9e-033
Identities = 28/57 (49%), Positives = 38/57 (66%)
Frame = -2 / -2
Query: 616 HNVTDYNFPAILP*RNRLPALSQKLDALLIGQVVQHKL*HDSLSRWNETEHVTFDIV 446
HNV D +FP+ RN LPAL + LDA+L+ VQ+KL LSRW++ E VT +I+
Sbjct: 491 HNVYDDDFPSCFTWRNGLPALCEDLDAILVAPEVQNKLEQHGLSRWDDVEQVTRNIL 321
Score = 63.4 bits (132), Expect(5) = 7e-022
Identities = 30/54 (55%), Positives = 34/54 (62%)
Frame = -3 / -3
Query: 612 MSPIITFPPSFREGIAFRH*ARSLTHSSSVRWCSTSFSTTV*AGGMKLNMSPST 451
MS +TFPP+ R G AF H AR L SSS++ C TS S T *AGG N SP T
Sbjct: 487 MSMTMTFPPASRGGTAFLHCARILMQSSSLQKCRTSLSNTA*AGGTTWNRSPET 326
Score = 48.7 bits (100), Expect(4) = 9e-033
Identities = 27/59 (45%), Positives = 31/59 (52%)
Frame = -3 / -3
Query: 321 Q*VMDWIPSNKSLNSRSAISTPKLSWVSKASLAMSWKSASRLPMLSWNRVAPCSSSNGD 145
Q V D PSN S + RS P SW + AS S SR MLS APC+SSNG+
Sbjct: 196 QSVRDSSPSNSSRH*RSTGPIPMWSWAATASWMSWSISGSRSAMLSSKMAAPCTSSNGE 20
Score = 47.8 bits (98), Expect(4) = 9e-033
Identities = 23/37 (62%), Positives = 26/37 (70%)
Frame = -3 / -3
Query: 735 PALVKS*RHSFSSCCRPFVMVIMPMSIRS*VSSIGPE 625
PALVK SFSS CRP V+ M +S+R VSSIGPE
Sbjct: 613 PALVKISFQSFSSRCRPLVITSMSISMRCWVSSIGPE 503
Score = 42.3 bits (86), Expect(4) = 2e-044
Identities = 17/34 (50%), Positives = 21/34 (61%)
Frame = +1 / +2
Query: 628 WAYAGNSAPDGHRHDDHDKRTTARRKRMASALHQ 729
WA AGN AP G+ H D+R TA R+ + LHQ
Sbjct: 506 WANAGNPAPHGYAHAGDDERPTAGREGLERDLHQ 607
Score = 39.1 bits (79), Expect(5) = 7e-022
Identities = 15/34 (44%), Positives = 19/34 (55%)
Frame = -2 / -2
Query: 727 GEELTPFFFVVLSSFCHGHHADVHQELSFQHRPR 626
GE+L P LS+ H H +H+ L FQH PR
Sbjct: 605 GEDLVPVLLFPLSASRHHQHEHIHEVLGFQHWPR 504
Score = 35.4 bits (71), Expect(4) = 9e-033
Identities = 12/23 (52%), Positives = 14/23 (60%)
Frame = -1 / -1
Query: 404 EGPAQCILCVGRPWQWPWHPCHH 336
EG A+C C GRP +W CHH
Sbjct: 273 EGRARCS*CAGRPRRWTSPSCHH 205
Score = 35.4 bits (71), Expect(4) = 2e-044
Identities = 13/21 (61%), Positives = 16/21 (76%)
Frame = +2 / +3
Query: 335 GDDKGARAIAKAFPHIKCTVL 397
GD AR+I +A+PHI CTVL
Sbjct: 204 GDGTTARSIVEAYPHINCTVL 266
Score = 26.7 bits (52), Expect(5) = 7e-022
Identities = 12/23 (52%), Positives = 14/23 (60%)
Frame = -2 / -2
Query: 328 TAAVGHGLDPLEQVPELPQRHLD 260
TAAVG L PLEQ+ L + D
Sbjct: 203 TAAVGERLKPLEQLTALTEHGAD 135
Score = 23.5 bits (45), Expect(5) = 7e-022
Identities = 10/19 (52%), Positives = 12/19 (63%)
Frame = -2 / -2
Query: 205 VEAAHALVEQSRPVQLLER 149
VE HAL+E V +LER
Sbjct: 80 VEERHALLEDGGAVHVLER 24
Score = 22.6 bits (43), Expect(5) = 7e-022
Identities = 8/15 (53%), Positives = 10/15 (66%)
Frame = -3 / -3
Query: 417 AMILGGASTVHFMCG 373
+M G +STV MCG
Sbjct: 286 SMTFGRSSTVQLMCG 242
>gb|BI778623.2|BI778623 EBro07_SQ003_N10_R root, 3 week, reduced light, cv Optic, EBro07
Hordeum vulgare subsp. vulgare cDNA clone
EBro07_SQ003_N10 5', mRNA sequence
Length = 604
Score = 82.2 bits (173), Expect(4) = 5e-044
Identities = 33/62 (53%), Positives = 44/62 (70%)
Frame = +2 / +2
Query: 443 INYVEGDMFSFIPPAQTXXXXXXXXXXTDEECVKLLAQCRKAIPSRKDGGKVIIGDIMID 622
INYV GD+F +PP+Q +DE+CVK+LAQCRKAIP R++GGKVII +I++
Sbjct: 320 INYVAGDLFHTVPPSQVVMLKLVLHFWSDEDCVKILAQCRKAIPPREEGGKVIIIEIVVG 499
Query: 623 HS 628
S
Sbjct: 500 PS 505
Score = 70.7 bits (148), Expect(4) = 5e-044
Identities = 28/64 (43%), Positives = 36/64 (56%)
Frame = +2 / +2
Query: 146 SPFEELHGATLFHESMGSLDADFHDMASDALDTHDNFGVEMALREFRDLFEGIQSMTYCC 325
SPFEE G LF E LD + + + L HDN G+ LRE D+F+G+ S+T CC
Sbjct: 32 SPFEEKFGVPLFDEKTALLDQELDSVCNQGLAAHDNLGIATILRECGDIFKGLDSLTDCC 211
Query: 326 GNFG 337
G G
Sbjct: 212 GGDG 223
Score = 68.4 bits (143), Expect(4) = 9e-027
Identities = 33/57 (57%), Positives = 39/57 (68%)
Frame = -3 / -2
Query: 612 MSPIITFPPSFREGIAFRH*ARSLTHSSSVRWCSTSFSTTV*AGGMKLNMSPST*FI 442
+S IITFPPS R G+AF H AR T SSS++ CSTS S T * GG N SP+T* +
Sbjct: 489 ISMIITFPPSSRGGMAFLHWARIFTQSSSLQKCSTSLSITT*DGGTVWNRSPAT*LM 319
Score = 42.3 bits (86), Expect(4) = 5e-044
Identities = 18/35 (51%), Positives = 20/35 (57%)
Frame = +2 / +2
Query: 335 GDDKGARAIAKAFPHIKCTVLXXXXXXXXXXXDGV 439
GD ARA+ KA+PHIKCTVL DGV
Sbjct: 215 GDGTTARALVKAYPHIKCTVLDLPKVVEKAPADGV 319
Score = 39.6 bits (80), Expect(4) = 5e-044
Identities = 16/29 (55%), Positives = 19/29 (65%)
Frame = +2 / +2
Query: 635 MLETQLLMDIGMMTMTKGRQHDEKEWRQL 721
M E QLLMD+ MM T+G Q DE W +L
Sbjct: 518 MFEAQLLMDMLMMVNTRGGQRDENHWCEL 604
Score = 37.7 bits (76), Expect(4) = 9e-027
Identities = 22/60 (36%), Positives = 29/60 (48%)
Frame = -3 / -2
Query: 324 QQ*VMDWIPSNKSLNSRSAISTPKLSWVSKASLAMSWKSASRLPMLSWNRVAPCSSSNGD 145
QQ V + P S +SRS ++ P+LSW +K L S S + S P SS GD
Sbjct: 210 QQSVRESSPLKMSPHSRSMVAIPRLSWAAKPWLQTESSS*SSRAVFSSKSGTPNFSSKGD 31
Score = 35.9 bits (72), Expect(4) = 9e-027
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = -2 / -1
Query: 718 LTPFFFVVLSSFCHGHHADVHQELSFQH 635
LTP F+ L+ HH +HQEL F+H
Sbjct: 601 LTPVIFITLTPSRVHHHEHIHQELGFKH 518
Score = 33.6 bits (67), Expect(4) = 9e-027
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = -3 / -2
Query: 444 IFTPSAGLAAMILGGASTVHFMCG 373
+ TPSAG + G ++TVH MCG
Sbjct: 324 LMTPSAGAFSTTFGRSNTVHLMCG 253
>gb|BI778179.2|BI778179 EBro07_SQ002_H05_R root, 3 week, reduced light, cv Optic, EBro07
Hordeum vulgare subsp. vulgare cDNA clone
EBro07_SQ002_H05 5', mRNA sequence
Length = 643
Score = 77.6 bits (163), Expect(4) = 1e-043
Identities = 29/64 (45%), Positives = 42/64 (65%)
Frame = +2 / +1
Query: 146 SPFEELHGATLFHESMGSLDADFHDMASDALDTHDNFGVEMALREFRDLFEGIQSMTYCC 325
S FE++H A+LF ES +LD + + +D L HDN G+ +RE DLF+G++S+T CC
Sbjct: 217 SVFEDVHSASLFDESTAALDPELDALVTDGLAAHDNLGIGTIIRECHDLFKGLESLTDCC 396
Query: 326 GNFG 337
G G
Sbjct: 397 GGDG 408
Score = 58.3 bits (121), Expect(4) = 1e-043
Identities = 21/43 (48%), Positives = 33/43 (76%)
Frame = +2 / +1
Query: 8 VSYLLVEGIPHEDHMNHTSFVLTCTSSRYIEPAIGLAEWFRKD 136
+S +LV+G+ ++H + TSFVL TS Y+E A+G+A+WF+KD
Sbjct: 70 LSRILVDGVVADEHHSQTSFVLAGTSRHYMEAALGMADWFKKD 198
Score = 56.5 bits (117), Expect(4) = 1e-043
Identities = 21/46 (45%), Positives = 29/46 (63%)
Frame = +2 / +1
Query: 443 INYVEGDMFSFIPPAQTXXXXXXXXXXTDEECVKLLAQCRKAIPSR 580
+NYV GD+F +P AQ +D++CVK+L QC+ AIPSR
Sbjct: 505 VNYVGGDLFHTVPKAQAVMLKLVLHHWSDDDCVKILTQCKNAIPSR 642
Score = 54.7 bits (113), Expect(4) = 2e-030
Identities = 25/44 (56%), Positives = 29/44 (65%)
Frame = -3 / -3
Query: 579 REGIAFRH*ARSLTHSSSVRWCSTSFSTTV*AGGMKLNMSPST* 448
REG+AF H R T SSS++WC+TS S T *A G N SP T*
Sbjct: 641 REGMAFLHWVRIFTQSSSLQWCNTSLSITA*AFGTVWNRSPPT* 510
Score = 50.6 bits (104), Expect(4) = 2e-030
Identities = 24/60 (40%), Positives = 35/60 (58%)
Frame = -3 / -3
Query: 324 QQ*VMDWIPSNKSLNSRSAISTPKLSWVSKASLAMSWKSASRLPMLSWNRVAPCSSSNGD 145
QQ V D P +S +SR + P+LSW ++ S+ + S S+ +LS R A C+SSN D
Sbjct: 395 QQSVRDSRPLKRSWHSRMMVPIPRLSWAARPSVTSASSSGSKAAVLSSKRDALCTSSNTD 216
Score = 46.9 bits (96), Expect(4) = 2e-030
Identities = 23/39 (58%), Positives = 25/39 (64%)
Frame = -3 / -3
Query: 135 SFLNHSASPIAGSM*RDEVQVSTKEVWFMWSS*GMPSTR 19
SFLN SA P A SM* +V STK+VW SS PSTR
Sbjct: 197 SFLNQSAMPSAASM*CRDVPASTKDVWLWCSSATTPSTR 81
Score = 40.9 bits (83), Expect(4) = 1e-043
Identities = 18/35 (51%), Positives = 19/35 (54%)
Frame = +2 / +1
Query: 335 GDDKGARAIAKAFPHIKCTVLXXXXXXXXXXXDGV 439
GD ARAI KA PHIKCTVL DG+
Sbjct: 400 GDGTTARAITKAHPHIKCTVLDLPKVIDKTPADGI 504
Score = 35.9 bits (72), Expect(4) = 2e-030
Identities = 13/21 (61%), Positives = 17/21 (80%)
Frame = -3 / -3
Query: 435 PSAGLAAMILGGASTVHFMCG 373
PSAG+ ++ LG +STVH MCG
Sbjct: 500 PSAGVLSITLGRSSTVHLMCG 438
>gb|AV917258.1|AV917258 AV917258 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags18c14 5', mRNA sequence
Length = 582
Score = 82.6 bits (174), Expect(4) = 4e-042
Identities = 33/62 (53%), Positives = 43/62 (69%)
Frame = +2 / +1
Query: 635 MLETQLLMDIGMMTMTKGRQHDEKEWRQLFTKAGFSEYKILKEFGTRVAFEVYP*DIYLH 814
M E QLLMD+ MM T+G Q E +WR+LF +AGF +YKI+++ G R EVYP*D+ L
Sbjct: 361 MFEAQLLMDMLMMVTTRGVQRSENDWRKLFMEAGFKDYKIVRKLGARCVIEVYP*DVVL* 540
Query: 815 TY 820
Y
Sbjct: 541 GY 546
Score = 73.5 bits (154), Expect(4) = 4e-042
Identities = 29/62 (46%), Positives = 40/62 (64%)
Frame = +2 / +1
Query: 443 INYVEGDMFSFIPPAQTXXXXXXXXXXTDEECVKLLAQCRKAIPSRKDGGKVIIGDIMID 622
+NYV GD+F +P +Q +DE+CVK+L QC+KAIP +GGK+II DI+I
Sbjct: 163 VNYVAGDLFHTVPSSQAVMLKLVLHFWSDEDCVKILTQCKKAIPPHDEGGKIIIIDIVIG 342
Query: 623 HS 628
S
Sbjct: 343 PS 348
Score = 61.6 bits (128), Expect(4) = 2e-027
Identities = 26/70 (37%), Positives = 38/70 (54%)
Frame = -2 / -1
Query: 844 KARNPYAYICM*IYISRIDFEGNTSSKFLENLVFAEPCFGEELTPFFFVVLSSFCHGHHA 665
K+++ +I + I +D + +SS+F N + EPCF E L P F L C HH
Sbjct: 570 KSKHLSLFISLEHNILWVDLDNASSSQFPHNFIVFEPCFHE*LAPVIFTPLDPSCCHHHE 391
Query: 664 DVHQELSFQH 635
+HQEL F+H
Sbjct: 390 HIHQELGFKH 361
Score = 58.8 bits (122), Expect(4) = 2e-027
Identities = 30/57 (52%), Positives = 35/57 (61%)
Frame = -3 / -2
Query: 618 IIMSPIITFPPSFREGIAFRH*ARSLTHSSSVRWCSTSFSTTV*AGGMKLNMSPST* 448
I MS II FPPS G+AF H + T SSS++ CSTS S T * G N SP+T*
Sbjct: 338 ITMSMIIIFPPSSCGGMAFLHWVKIFTQSSSLQKCSTSLSMTA*EDGTVWNRSPAT* 168
Score = 41.8 bits (85), Expect(4) = 4e-042
Identities = 18/35 (51%), Positives = 20/35 (57%)
Frame = +2 / +1
Query: 335 GDDKGARAIAKAFPHIKCTVLXXXXXXXXXXXDGV 439
GD ARA+ KA+PHIKCTVL DGV
Sbjct: 58 GDGTTARALVKAYPHIKCTVLDLPKVIDKAPKDGV 162
Score = 31.3 bits (62), Expect(4) = 2e-027
Identities = 11/22 (50%), Positives = 15/22 (68%)
Frame = -3 / -2
Query: 438 TPSAGLAAMILGGASTVHFMCG 373
TPS G ++ G ++TVH MCG
Sbjct: 161 TPSFGALSITFGRSNTVHLMCG 96
Score = 30.4 bits (60), Expect(4) = 4e-042
Identities = 9/17 (52%), Positives = 14/17 (82%)
Frame = +2 / +1
Query: 287 DLFEGIQSMTYCCGNFG 337
D+F+G++S+T CCG G
Sbjct: 16 DIFKGLESLTDCCGGDG 66
Score = 26.3 bits (51), Expect(4) = 2e-027
Identities = 11/17 (64%), Positives = 12/17 (70%)
Frame = -2 / -1
Query: 337 TKVTAAVGHGLDPLEQV 287
T TAAV GL+PLE V
Sbjct: 66 TIATAAVSQGLEPLEDV 16
>gb|CB879142.1|CB879142 HP11B09T HP Hordeum vulgare subsp. vulgare cDNA clone HP11B09
5-PRIME, mRNA sequence
Length = 562
Score = 87.7 bits (185), Expect(3) = 4e-042
Identities = 34/64 (53%), Positives = 45/64 (70%)
Frame = +2 / +2
Query: 146 SPFEELHGATLFHESMGSLDADFHDMASDALDTHDNFGVEMALREFRDLFEGIQSMTYCC 325
SPFE++HGATLF ESM LD + ++ +AL HD+ G+ LRE DLF+G+QS+T CC
Sbjct: 44 SPFEDVHGATLFEESMALLDPESDELFHEALAAHDHLGIGTILRECHDLFKGVQSLTDCC 223
Query: 326 GNFG 337
G G
Sbjct: 224 GGDG 235
Score = 81.3 bits (171), Expect(3) = 4e-042
Identities = 32/62 (51%), Positives = 43/62 (69%)
Frame = +2 / +2
Query: 443 INYVEGDMFSFIPPAQTXXXXXXXXXXTDEECVKLLAQCRKAIPSRKDGGKVIIGDIMID 622
+NYV GD+F IPPAQ +DE+C+ +LAQC+KAIPSR+ GGKVI+ DI++
Sbjct: 332 VNYVAGDLFHAIPPAQVLMLKLVLHFWSDEDCINILAQCKKAIPSREMGGKVIVIDIVVG 511
Query: 623 HS 628
S
Sbjct: 512 SS 517
Score = 67.0 bits (140), Expect(3) = 6e-027
Identities = 32/60 (53%), Positives = 38/60 (63%)
Frame = -3 / -2
Query: 324 QQ*VMDWIPSNKSLNSRSAISTPKLSWVSKASLAMSWKSASRLPMLSWNRVAPCSSSNGD 145
QQ V DW P NKS +SR+ + PK SW +KAS S S SR +LS VAP +SSNGD
Sbjct: 222 QQSVSDWTPLNKSWHSRNIVPIPKWSWAAKASWNNSSDSGSRRAILSSKSVAP*TSSNGD 43
Score = 65.2 bits (136), Expect(3) = 6e-027
Identities = 31/55 (56%), Positives = 38/55 (69%)
Frame = -3 / -2
Query: 612 MSPIITFPPSFREGIAFRH*ARSLTHSSSVRWCSTSFSTTV*AGGMKLNMSPST* 448
+S ITFPP R+G+AF H*AR L SSS++ C TS S *AGG+ N SP+T*
Sbjct: 501 ISMTITFPPISRDGMAFLH*ARILMQSSSLQKCRTSLSMRT*AGGIAWNRSPAT* 337
Score = 41.4 bits (84), Expect(3) = 4e-042
Identities = 18/35 (51%), Positives = 19/35 (54%)
Frame = +2 / +2
Query: 335 GDDKGARAIAKAFPHIKCTVLXXXXXXXXXXXDGV 439
GD ARAI KAFPHIKC VL DG+
Sbjct: 227 GDGTTARAIVKAFPHIKCNVLDLPKVIEKVPSDGI 331
Score = 26.7 bits (52), Expect(3) = 6e-027
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = -1 / -3
Query: 404 EGPAQCILCVGRPWQWPWHPCHH 336
EGP GRP QWP HH
Sbjct: 296 EGPTHYT*YAGRP*QWP*LSFHH 228
>gb|AV922427.1|AV922427 AV922427 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags18c14 3', mRNA sequence
Length = 530
Score = 82.2 bits (173), Expect(4) = 5e-042
Identities = 32/59 (54%), Positives = 42/59 (71%)
Frame = +2 / -2
Query: 635 MLETQLLMDIGMMTMTKGRQHDEKEWRQLFTKAGFSEYKILKEFGTRVAFEVYP*DIYL 811
M E QLLMD+ MM T+G Q E +WR+LF +AGF +YKI+++ G R EVYP*D+ L
Sbjct: 181 MFEAQLLMDMLMMVTTRGVQRSENDWRKLFMEAGFKDYKIVRKLGARCVIEVYP*DVVL 5
Score = 73.5 bits (154), Expect(4) = 5e-042
Identities = 29/62 (46%), Positives = 40/62 (64%)
Frame = +2 / -2
Query: 443 INYVEGDMFSFIPPAQTXXXXXXXXXXTDEECVKLLAQCRKAIPSRKDGGKVIIGDIMID 622
+NYV GD+F +P +Q +DE+CVK+L QC+KAIP +GGK+II DI+I
Sbjct: 379 VNYVAGDLFHTVPSSQAVMLKLVLHFWSDEDCVKILTQCKKAIPPHDEGGKIIIIDIVIG 200
Query: 623 HS 628
S
Sbjct: 199 PS 194
Score = 61.1 bits (127), Expect(4) = 3e-027
Identities = 23/53 (43%), Positives = 30/53 (56%)
Frame = -2 / +2
Query: 793 IDFEGNTSSKFLENLVFAEPCFGEELTPFFFVVLSSFCHGHHADVHQELSFQH 635
+D + +SS+F N + EPCF E L P F L C HH +HQEL F+H
Sbjct: 23 VDLDNASSSQFPHNFIVFEPCFHE*LAPVIFTPLDPSCCHHHEHIHQELGFKH 181
Score = 58.8 bits (122), Expect(4) = 3e-027
Identities = 30/57 (52%), Positives = 35/57 (61%)
Frame = -3 / +3
Query: 618 IIMSPIITFPPSFREGIAFRH*ARSLTHSSSVRWCSTSFSTTV*AGGMKLNMSPST* 448
I MS II FPPS G+AF H + T SSS++ CSTS S T * G N SP+T*
Sbjct: 204 ITMSMIIIFPPSSCGGMAFLHWVKIFTQSSSLQKCSTSLSMTA*EDGTVWNRSPAT* 374
Score = 41.8 bits (85), Expect(4) = 5e-042
Identities = 18/35 (51%), Positives = 20/35 (57%)
Frame = +2 / -2
Query: 335 GDDKGARAIAKAFPHIKCTVLXXXXXXXXXXXDGV 439
GD ARA+ KA+PHIKCTVL DGV
Sbjct: 484 GDGTTARALVKAYPHIKCTVLDLPKVIDKAPKDGV 380
Score = 31.3 bits (62), Expect(4) = 3e-027
Identities = 11/22 (50%), Positives = 15/22 (68%)
Frame = -3 / +3
Query: 438 TPSAGLAAMILGGASTVHFMCG 373
TPS G ++ G ++TVH MCG
Sbjct: 381 TPSFGALSITFGRSNTVHLMCG 446
Score = 30.4 bits (60), Expect(4) = 5e-042
Identities = 9/17 (52%), Positives = 14/17 (82%)
Frame = +2 / -2
Query: 287 DLFEGIQSMTYCCGNFG 337
D+F+G++S+T CCG G
Sbjct: 526 DIFKGLESLTDCCGGDG 476
Score = 26.3 bits (51), Expect(4) = 3e-027
Identities = 11/17 (64%), Positives = 12/17 (70%)
Frame = -2 / +2
Query: 337 TKVTAAVGHGLDPLEQV 287
T TAAV GL+PLE V
Sbjct: 476 TIATAAVSQGLEPLEDV 526
>gb|AL504415.1|AL504415 AL504415 Hordeum vulgare Barke roots Hordeum vulgare subsp. vulgare
cDNA clone HW05D13V 5', mRNA sequence
Length = 684
Score = 79.0 bits (166), Expect(4) = 2e-041
Identities = 30/64 (46%), Positives = 43/64 (67%)
Frame = +2 / +1
Query: 146 SPFEELHGATLFHESMGSLDADFHDMASDALDTHDNFGVEMALREFRDLFEGIQSMTYCC 325
SPFE++HGA +F ESM LD + + DA+ HD+ G+ LR+ R+LFEG++S+T C
Sbjct: 97 SPFEDVHGAAIFEESMALLDPEMDQLIHDAVAAHDHMGIGPVLRQCRELFEGLESLTDCG 276
Query: 326 GNFG 337
G G
Sbjct: 277 GGDG 288
Score = 75.3 bits (158), Expect(4) = 2e-041
Identities = 28/59 (47%), Positives = 40/59 (67%)
Frame = +2 / +1
Query: 443 INYVEGDMFSFIPPAQTXXXXXXXXXXTDEECVKLLAQCRKAIPSRKDGGKVIIGDIMI 619
+ YV GD+F +PPAQ +DE+C+K+LAQCRKA+P R+ GKVI+ DI++
Sbjct: 394 VKYVXGDLFHVVPPAQAVLLKLVLHFWSDEDCIKILAQCRKAVPPREAXGKVIVIDIVL 570
Score = 63.8 bits (133), Expect(4) = 3e-029
Identities = 28/57 (49%), Positives = 37/57 (64%)
Frame = -2 / -1
Query: 616 HNVTDYNFPAILP*RNRLPALSQKLDALLIGQVVQHKL*HDSLSRWNETEHVTFDIV 446
HNV D +FP+ RN LPAL + LDA+L+ VQ+KL LSRW+ E VT +I+
Sbjct: 567 HNVYDDDFPSCFTWRNGLPALCEDLDAILVAPEVQNKLEQHGLSRWDXVEQVTXNIL 397
Score = 48.7 bits (100), Expect(4) = 3e-029
Identities = 27/59 (45%), Positives = 31/59 (52%)
Frame = -3 / -2
Query: 321 Q*VMDWIPSNKSLNSRSAISTPKLSWVSKASLAMSWKSASRLPMLSWNRVAPCSSSNGD 145
Q V D PSN S + RS P SW + AS S SR MLS APC+SSNG+
Sbjct: 272 QSVRDSSPSNSSRH*RSTGPIPMWSWAATASWMSWSISGSRSAMLSSKMAAPCTSSNGE 96
Score = 36.3 bits (73), Expect(4) = 3e-029
Identities = 14/24 (58%), Positives = 17/24 (70%)
Frame = -2 / -1
Query: 136 VLPEPLGQPYCRLDVARRGAGEHE 65
VLPEP+GQ + RL V RG G H+
Sbjct: 78 VLPEPVGQAHGRLXVVARGRGAHD 7
Score = 36.3 bits (73), Expect(4) = 2e-041
Identities = 14/26 (53%), Positives = 17/26 (65%)
Frame = +2 / +1
Query: 59 TSFVLTCTSSRYIEPAIGLAEWFRKD 136
T+ V S Y E A+GLA+WFRKD
Sbjct: 1 TAIVRAAASRYYXEAAMGLADWFRKD 78
Score = 35.4 bits (71), Expect(4) = 3e-029
Identities = 12/23 (52%), Positives = 14/23 (60%)
Frame = -1 / -3
Query: 404 EGPAQCILCVGRPWQWPWHPCHH 336
EG A+C C GRP +W CHH
Sbjct: 349 EGRARCS*CAGRPRRWTSPSCHH 281
Score = 35.4 bits (71), Expect(4) = 2e-041
Identities = 13/21 (61%), Positives = 16/21 (76%)
Frame = +2 / +1
Query: 335 GDDKGARAIAKAFPHIKCTVL 397
GD AR+I +A+PHI CTVL
Sbjct: 280 GDGTTARSIVEAYPHINCTVL 342
>gb|CD662493.1|CD662493 UCRHV18_01ch06_b1 Drought-stressed Dicktoo barley epidermis cDNA
library Hordeum vulgare subsp. vulgare cDNA clone
UCRHV18_01ch06, mRNA sequence
Length = 865
Score = 90.4 bits (191), Expect(4) = 3e-041
Identities = 38/72 (52%), Positives = 50/72 (69%)
Frame = +2 / -1
Query: 587 GGKVIIGDIMIDHSGPMLETQLLMDIGMMTMTKGRQHDEKEWRQLFTKAGFSEYKILKEF 766
G ++I ++ S MLETQLL+D+ M+ T+GRQ DE +W +FTKAGFS YKI+K+
Sbjct: 508 GKVIVIDIVVGSSSKEMLETQLLVDMLMLVCTRGRQRDENDWSTIFTKAGFSGYKIVKKL 329
Query: 767 GTRVAFEVYP*D 802
G R EVYP*D
Sbjct: 328 GPRGVIEVYP*D 293
Score = 65.2 bits (136), Expect(4) = 1e-029
Identities = 31/55 (56%), Positives = 38/55 (69%)
Frame = -3 / +3
Query: 612 MSPIITFPPSFREGIAFRH*ARSLTHSSSVRWCSTSFSTTV*AGGMKLNMSPST* 448
+S ITFPP R+G+AF H*AR L SSS++ C TS S *AGG+ N SP+T*
Sbjct: 486 ISMTITFPPISRDGMAFLH*ARILMQSSSLQKCRTSLSMRT*AGGIAWNRSPAT* 650
Score = 51.5 bits (106), Expect(4) = 3e-041
Identities = 19/36 (52%), Positives = 25/36 (69%)
Frame = +2 / -1
Query: 230 DALDTHDNFGVEMALREFRDLFEGIQSMTYCCGNFG 337
+AL HD+ G+ LRE DLF+G+QS+T CCG G
Sbjct: 859 EALAAHDHLGIGTILRECHDLFKGVQSLTDCCGGDG 752
Score = 48.3 bits (99), Expect(4) = 1e-029
Identities = 29/56 (51%), Positives = 33/56 (58%)
Frame = -3 / +3
Query: 801 SHG*TSKATRVPNSLRILYSLNPALVKS*RHSFSSCCRPFVMVIMPMSIRS*VSSI 634
S+G*TS R P+ L IL LNPA VK SFSS RP V M +S S VS+I
Sbjct: 294 SYG*TSMTPRGPSFLTIL*PLNPAFVKIVLQSFSSR*RPLVHTNMSISTNSWVSNI 461
Score = 45.5 bits (93), Expect(4) = 1e-029
Identities = 18/32 (56%), Positives = 22/32 (68%)
Frame = -3 / +3
Query: 324 QQ*VMDWIPSNKSLNSRSAISTPKLSWVSKAS 229
QQ V DW P NKS +SR+ + PK SW +KAS
Sbjct: 765 QQSVSDWTPLNKSWHSRNIVPIPKWSWAAKAS 860
Score = 41.8 bits (85), Expect(4) = 3e-041
Identities = 22/51 (43%), Positives = 29/51 (56%)
Frame = +1 / -3
Query: 448 LCRR*HVQFHSTCSNCRAKACAAPPDR*GVRQASGSMPEGDSFTEGWRESY 600
LCR * + +STCS+ A AC+A + * + Q SGSM EG S + Y
Sbjct: 650 LCRW*PIPCYSTCSSSHA*ACSALLE**RLHQYSGSMQEGHSVPRNGGKGY 498
Score = 41.4 bits (84), Expect(4) = 3e-041
Identities = 18/35 (51%), Positives = 19/35 (54%)
Frame = +2 / -1
Query: 335 GDDKGARAIAKAFPHIKCTVLXXXXXXXXXXXDGV 439
GD ARAI KAFPHIKC VL DG+
Sbjct: 760 GDGTTARAIVKAFPHIKCNVLDLPKVIEKVPSDGI 656
Score = 26.7 bits (52), Expect(4) = 1e-029
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = -1 / +1
Query: 404 EGPAQCILCVGRPWQWPWHPCHH 336
EGP GRP QWP HH
Sbjct: 691 EGPTHYT*YAGRP*QWP*LSFHH 759
>gb|AV918157.1|AV918157 AV918157 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags20b03 3', mRNA sequence
Length = 676
Score = 77.6 bits (163), Expect(4) = 3e-040
Identities = 29/62 (46%), Positives = 43/62 (69%)
Frame = +2 / -1
Query: 443 INYVEGDMFSFIPPAQTXXXXXXXXXXTDEECVKLLAQCRKAIPSRKDGGKVIIGDIMID 622
+NYV GD+F +P AQ +D++CVK+L QC+ AIPSR++GGKVI+ DI+++
Sbjct: 502 VNYVAGDLFHTVPKAQAVMLKLVLHHWSDDDCVKILTQCKNAIPSREEGGKVIVIDIVVE 323
Query: 623 HS 628
S
Sbjct: 322 PS 317
Score = 77.1 bits (162), Expect(4) = 3e-040
Identities = 30/57 (52%), Positives = 39/57 (68%)
Frame = +2 / -1
Query: 635 MLETQLLMDIGMMTMTKGRQHDEKEWRQLFTKAGFSEYKILKEFGTRVAFEVYP*DI 805
M E Q LMD+ M+ T+GRQ E +WR LF KAGF++YKI+K+ G R EVY * +
Sbjct: 304 MFEAQTLMDMLMLVFTRGRQRSENDWRDLFMKAGFTDYKIIKKMGARGVIEVYK*SL 134
Score = 73.0 bits (153), Expect(3) = 7e-024
Identities = 34/58 (58%), Positives = 39/58 (67%)
Frame = -3 / +3
Query: 621 SIIMSPIITFPPSFREGIAFRH*ARSLTHSSSVRWCSTSFSTTV*AGGMKLNMSPST* 448
S +S ITFPPS REG+AF H R T SSS++WCSTS S T *A G N SP+T*
Sbjct: 324 STTISMTITFPPSSREGMAFLHWVRIFTQSSSLQWCSTSLSITA*AFGTVWNRSPAT* 497
Score = 52.8 bits (109), Expect(3) = 7e-024
Identities = 19/53 (35%), Positives = 30/53 (56%)
Frame = -2 / +2
Query: 793 IDFEGNTSSKFLENLVFAEPCFGEELTPFFFVVLSSFCHGHHADVHQELSFQH 635
+D + + + FL+N V EPCF EE++P F L++ H VH+ L +H
Sbjct: 146 VDLDDTSCTHFLDNFVVGEPCFHEEVSPVIFATLTAPREHKHEHVHESLGLKH 304
Score = 35.9 bits (72), Expect(4) = 3e-040
Identities = 12/22 (54%), Positives = 17/22 (77%)
Frame = +2 / -3
Query: 272 LREFRDLFEGIQSMTYCCGNFG 337
+RE DLF+G++S+T CCG G
Sbjct: 665 MRECHDLFKGLESLTDCCGGDG 600
Score = 31.3 bits (62), Expect(4) = 3e-040
Identities = 12/17 (70%), Positives = 13/17 (76%)
Frame = +2 / -3
Query: 335 GDDKGARAIAKAFPHIK 385
GD K ARAI KA PH+K
Sbjct: 608 GDGKTARAITKAHPHVK 558
Score = 22.6 bits (43), Expect(3) = 7e-024
Identities = 7/13 (53%), Positives = 7/13 (53%)
Frame = -1 / +2
Query: 374 GRPWQWPWHPCHH 336
G PW WP HH
Sbjct: 569 GVPW*WPSPSFHH 607
>gb|BJ468335.1|BJ468335 BJ468335 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags38e18 3', mRNA sequence
Length = 744
Score = 78.5 bits (165), Expect(4) = 7e-040
Identities = 32/57 (56%), Positives = 38/57 (66%)
Frame = +2 / -3
Query: 635 MLETQLLMDIGMMTMTKGRQHDEKEWRQLFTKAGFSEYKILKEFGTRVAFEVYP*DI 805
M E Q LMDI M+ T+GRQ E +W LFTKAGFS+YKI+K G R EVY * +
Sbjct: 370 MFEAQTLMDILMLVFTRGRQRSESDWHVLFTKAGFSDYKIVKRLGARGVIEVYK*TV 200
Score = 77.1 bits (162), Expect(4) = 7e-040
Identities = 29/62 (46%), Positives = 43/62 (69%)
Frame = +2 / -3
Query: 443 INYVEGDMFSFIPPAQTXXXXXXXXXXTDEECVKLLAQCRKAIPSRKDGGKVIIGDIMID 622
+NYV GD+F +P AQ +D++CVK+L QC+ AIPSR++GGKVI+ DI+++
Sbjct: 568 VNYVGGDLFHTVPKAQAVMLKLVLHHWSDDDCVKILTQCKNAIPSREEGGKVIVIDIVVE 389
Query: 623 HS 628
S
Sbjct: 388 PS 383
Score = 72.5 bits (152), Expect(3) = 2e-025
Identities = 34/58 (58%), Positives = 38/58 (65%)
Frame = -3 / +3
Query: 621 SIIMSPIITFPPSFREGIAFRH*ARSLTHSSSVRWCSTSFSTTV*AGGMKLNMSPST* 448
S MS ITFPPS REG+AF H R T SSS++WC+TS S T *A G N SP T*
Sbjct: 390 STTMSMTITFPPSSREGMAFLHWVRIFTQSSSLQWCNTSLSITA*AFGTVWNRSPPT* 563
Score = 48.7 bits (100), Expect(3) = 2e-025
Identities = 19/55 (34%), Positives = 29/55 (52%)
Frame = -2 / +2
Query: 799 SRIDFEGNTSSKFLENLVFAEPCFGEELTPFFFVVLSSFCHGHHADVHQELSFQH 635
S +D + + ++ +N + AEPCFGE P F L++ H VHQ L +H
Sbjct: 206 SLVDLDNTSCTQSFDNFIIAEPCFGE*HMPVTFTTLTASREDKHEYVHQSLRLKH 370
Score = 35.9 bits (72), Expect(4) = 7e-040
Identities = 12/22 (54%), Positives = 17/22 (77%)
Frame = +2 / -2
Query: 272 LREFRDLFEGIQSMTYCCGNFG 337
+RE DLF+G++S+T CCG G
Sbjct: 731 IRECHDLFKGLESLTDCCGGDG 666
Score = 32.2 bits (64), Expect(3) = 2e-025
Identities = 12/21 (57%), Positives = 16/21 (76%)
Frame = -3 / +3
Query: 435 PSAGLAAMILGGASTVHFMCG 373
PSA + ++ LG +STVH MCG
Sbjct: 573 PSAEVLSITLGRSSTVHLMCG 635
Score = 29.0 bits (57), Expect(4) = 7e-040
Identities = 11/25 (44%), Positives = 13/25 (52%)
Frame = +2 / -3
Query: 365 KAFPHIKCTVLXXXXXXXXXXXDGV 439
+A PHIKCTVL DG+
Sbjct: 643 RAHPHIKCTVLDLPKVIDKTSADGI 569
>gb|AV918653.1|AV918653 AV918653 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags21m09 3', mRNA sequence
Length = 628
Score = 87.7 bits (185), Expect(4) = 7e-040
Identities = 35/64 (54%), Positives = 44/64 (68%)
Frame = +2 / -3
Query: 146 SPFEELHGATLFHESMGSLDADFHDMASDALDTHDNFGVEMALREFRDLFEGIQSMTYCC 325
SPFE++HGATLF ESM LD + M +AL HD+ G+ LRE DLF+G+QS+T CC
Sbjct: 458 SPFEDVHGATLFEESMALLDPESDKMFHEALAAHDHLGIGTILRECHDLFKGVQSLTDCC 279
Query: 326 GNFG 337
G G
Sbjct: 278 GGDG 267
Score = 65.7 bits (137), Expect(4) = 6e-027
Identities = 31/60 (51%), Positives = 38/60 (63%)
Frame = -3 / +1
Query: 324 QQ*VMDWIPSNKSLNSRSAISTPKLSWVSKASLAMSWKSASRLPMLSWNRVAPCSSSNGD 145
QQ V DW P NKS +SR+ + PK SW +KAS + S SR +LS VAP +SSNGD
Sbjct: 280 QQSVSDWTPLNKSWHSRNIVPIPKWSWAAKASWNILSDSGSRSAILSSKSVAP*TSSNGD 459
Score = 59.7 bits (124), Expect(4) = 7e-040
Identities = 24/48 (50%), Positives = 33/48 (68%)
Frame = +2 / -3
Query: 8 VSYLLVEGIPHEDHMNHTSFVLTCTSSRYIEPAIGLAEWFRKDTATSP 151
+SYLLV+G+ + + + VLT TS YIE A+GLA+WF+KD A P
Sbjct: 602 LSYLLVDGVFIDGEASQKAIVLTTTSRHYIEAALGLADWFKKDIAPPP 459
Score = 50.6 bits (104), Expect(4) = 6e-027
Identities = 27/49 (55%), Positives = 30/49 (61%)
Frame = -3 / +1
Query: 162 SSSNGDVAVSFLNHSASPIAGSM*RDEVQVSTKEVWFMWSS*GMPSTRR 16
S+ +G A+SFLN SASP A SM* EV VST W S PSTRR
Sbjct: 448 SNGDGGGAMSFLNQSASPKAASM*CLEVVVSTMAFWLASPSMNTPSTRR 594
Score = 41.4 bits (84), Expect(4) = 7e-040
Identities = 18/35 (51%), Positives = 19/35 (54%)
Frame = +2 / -3
Query: 335 GDDKGARAIAKAFPHIKCTVLXXXXXXXXXXXDGV 439
GD ARAI KAFPHIKC VL DG+
Sbjct: 275 GDGTTARAIVKAFPHIKCNVLDLPKVIEKVPSDGI 171
Score = 31.8 bits (63), Expect(4) = 7e-040
Identities = 11/16 (68%), Positives = 13/16 (81%)
Frame = +2 / -3
Query: 443 INYVEGDMFSFIPPAQ 490
+NYV GD+F IPPAQ
Sbjct: 170 VNYVAGDLFHAIPPAQ 123
Score = 31.8 bits (63), Expect(4) = 6e-027
Identities = 12/23 (52%), Positives = 12/23 (52%)
Frame = -1 / +2
Query: 404 EGPAQCILCVGRPWQWPWHPCHH 336
EGP C GRP QWP HH
Sbjct: 206 EGPTHCT*YAGRP*QWP*LSFHH 274
Score = 28.1 bits (55), Expect(4) = 6e-027
Identities = 11/18 (61%), Positives = 14/18 (77%)
Frame = -2 / +3
Query: 499 HDSLSRWNETEHVTFDIV 446
H++LSRWN E VT +IV
Sbjct: 114 HENLSRWNGME*VTSNIV 167
>gb|BJ463768.1|BJ463768 BJ463768 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags30g22 5', mRNA sequence
Length = 626
Score = 70.7 bits (148), Expect(4) = 1e-039
Identities = 28/64 (43%), Positives = 36/64 (56%)
Frame = +2 / +3
Query: 146 SPFEELHGATLFHESMGSLDADFHDMASDALDTHDNFGVEMALREFRDLFEGIQSMTYCC 325
SPFEE G LF E LD + + + L HDN G+ LRE D+F+G+ S+T CC
Sbjct: 219 SPFEEKFGVPLFDEKTALLDQELDSVCNQGLAAHDNLGIATILRECGDIFKGLDSLTDCC 398
Query: 326 GNFG 337
G G
Sbjct: 399 GGDG 410
Score = 53.3 bits (110), Expect(4) = 1e-039
Identities = 20/40 (50%), Positives = 26/40 (65%)
Frame = +2 / +3
Query: 443 INYVEGDMFSFIPPAQTXXXXXXXXXXTDEECVKLLAQCR 562
INYV GD+F +PP+Q +DE+CVK+LAQCR
Sbjct: 507 INYVAGDLFHTVPPSQVVMLKLVLHFWSDEDCVKILAQCR 626
Score = 53.3 bits (110), Expect(4) = 1e-039
Identities = 21/44 (47%), Positives = 30/44 (68%)
Frame = +2 / +3
Query: 8 VSYLLVEGIPHEDHMNHTSFVLTCTSSRYIEPAIGLAEWFRKDT 139
+S +LV G+ ++H + FVL TS Y E A+GLA+WF+KDT
Sbjct: 72 LSRVLVHGVLADEHHSQKYFVLGVTSPHYTEAALGLADWFKKDT 203
Score = 42.8 bits (87), Expect(4) = 4e-021
Identities = 21/39 (53%), Positives = 25/39 (64%)
Frame = -3 / -2
Query: 558 H*ARSLTHSSSVRWCSTSFSTTV*AGGMKLNMSPST*FI 442
H AR T SSS++ CSTS S T * GG N SP+T* +
Sbjct: 622 HWARIFTQSSSLQKCSTSLSITT*DGGTVWNRSPAT*LM 506
Score = 42.3 bits (86), Expect(4) = 1e-039
Identities = 18/35 (51%), Positives = 20/35 (57%)
Frame = +2 / +3
Query: 335 GDDKGARAIAKAFPHIKCTVLXXXXXXXXXXXDGV 439
GD ARA+ KA+PHIKCTVL DGV
Sbjct: 402 GDGTTARALVKAYPHIKCTVLDLPKVVEKAPADGV 506
Score = 41.8 bits (85), Expect(4) = 4e-021
Identities = 23/45 (51%), Positives = 25/45 (55%)
Frame = -3 / -2
Query: 153 NGDVAVSFLNHSASPIAGSM*RDEVQVSTKEVWFMWSS*GMPSTR 19
N +VSFLN SASP A S+* EV TK W SS P TR
Sbjct: 217 NTGSSVSFLNQSASPNAASV*CGEVTPRTKYFWLWCSSARTPCTR 83
Score = 37.7 bits (76), Expect(4) = 4e-021
Identities = 22/60 (36%), Positives = 29/60 (48%)
Frame = -3 / -2
Query: 324 QQ*VMDWIPSNKSLNSRSAISTPKLSWVSKASLAMSWKSASRLPMLSWNRVAPCSSSNGD 145
QQ V + P S +SRS ++ P+LSW +K L S S + S P SS GD
Sbjct: 397 QQSVRESSPLKMSPHSRSMVAIPRLSWAAKPWLQTESSS*SSRAVFSSKSGTPNFSSKGD 218
Score = 33.6 bits (67), Expect(4) = 4e-021
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = -3 / -2
Query: 444 IFTPSAGLAAMILGGASTVHFMCG 373
+ TPSAG + G ++TVH MCG
Sbjct: 511 LMTPSAGAFSTTFGRSNTVHLMCG 440
>gb|BI956453.1|BI956453 HVSMEn0003H10f Hordeum vulgare rachis EST library HVcDNA0015
(normal) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEn0003H10f, mRNA sequence
Length = 657
Score = 79.9 bits (168), Expect(4) = 1e-038
Identities = 30/64 (46%), Positives = 43/64 (67%)
Frame = +2 / +1
Query: 146 SPFEELHGATLFHESMGSLDADFHDMASDALDTHDNFGVEMALREFRDLFEGIQSMTYCC 325
SPFE++HGA +F ESM LD + + DA+ HD+ G+ LR+ R+LFEG++S+T C
Sbjct: 241 SPFEDVHGAAIFEESMALLDPEMDHLIHDAVSAHDHMGIGPVLRQCRELFEGLESLTNCG 420
Query: 326 GNFG 337
G G
Sbjct: 421 GGDG 432
Score = 50.6 bits (104), Expect(4) = 1e-038
Identities = 17/40 (42%), Positives = 25/40 (62%)
Frame = +2 / +1
Query: 443 INYVEGDMFSFIPPAQTXXXXXXXXXXTDEECVKLLAQCR 562
+ YV GD+F +PPAQ +DE+C+K+LAQC+
Sbjct: 538 VKYVSGDLFHVVPPAQAVLLKLVLHFWSDEDCIKILAQCK 657
Score = 50.6 bits (104), Expect(4) = 1e-038
Identities = 19/43 (44%), Positives = 29/43 (67%)
Frame = +2 / +1
Query: 8 VSYLLVEGIPHEDHMNHTSFVLTCTSSRYIEPAIGLAEWFRKD 136
+SYLLV+G+ + + T+ V S Y+E A+GLA+WF+KD
Sbjct: 94 LSYLLVDGVRIDGDASQTAIVRAAASRYYVEAAMGLADWFKKD 222
Score = 48.3 bits (99), Expect(4) = 7e-024
Identities = 27/59 (45%), Positives = 30/59 (50%)
Frame = -3 / -2
Query: 321 Q*VMDWIPSNKSLNSRSAISTPKLSWVSKASLAMSWKSASRLPMLSWNRVAPCSSSNGD 145
Q V D PSN S + RS P SW AS S SR MLS APC+SSNG+
Sbjct: 416 QLVRDSSPSNSSRH*RSTGPIPMWSWAETASWMRWSISGSRSAMLSSKMAAPCTSSNGE 240
Score = 43.7 bits (89), Expect(4) = 7e-024
Identities = 20/45 (44%), Positives = 27/45 (60%)
Frame = -2 / -1
Query: 136 VLPEPLGQPYCRLDVARRGAGEHERGVVHVVLVRDAFHQEVGDLV 2
VL EP+GQ + RL V RG G H+ + V + DA H+EV + V
Sbjct: 222 VLLEPVGQAHGRLHVVARGRGAHDGRLAGVAVDADAVHEEVRERV 88
Score = 42.3 bits (86), Expect(4) = 7e-024
Identities = 18/38 (47%), Positives = 26/38 (68%)
Frame = -2 / -1
Query: 559 ALSQKLDALLIGQVVQHKL*HDSLSRWNETEHVTFDIV 446
AL + LDA+L+ VQ+KL LSRW++ E VT +I+
Sbjct: 654 ALCEDLDAILVAPKVQNKLEQHGLSRWDDVEQVTRNIL 541
Score = 35.4 bits (71), Expect(4) = 1e-038
Identities = 13/21 (61%), Positives = 16/21 (76%)
Frame = +2 / +1
Query: 335 GDDKGARAIAKAFPHIKCTVL 397
GD AR+I +A+PHI CTVL
Sbjct: 424 GDGTTARSIVEAYPHINCTVL 486
Score = 31.3 bits (62), Expect(4) = 7e-024
Identities = 11/23 (47%), Positives = 13/23 (56%)
Frame = -1 / -3
Query: 404 EGPAQCILCVGRPWQWPWHPCHH 336
E A+C C GRP +W CHH
Sbjct: 493 EDRARCS*CAGRPRRWTSPLCHH 425
>gb|AV916317.1|AV916317 AV916317 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags12j23 5', mRNA sequence
Length = 585
Score = 82.2 bits (173), Expect(4) = 4e-038
Identities = 33/62 (53%), Positives = 44/62 (70%)
Frame = +2 / +2
Query: 443 INYVEGDMFSFIPPAQTXXXXXXXXXXTDEECVKLLAQCRKAIPSRKDGGKVIIGDIMID 622
INYV GD+F +PP+Q +DE+CVK+LAQCRKAIP R++GGKVII +I++
Sbjct: 296 INYVAGDLFHTVPPSQVVMLKLVLHFWSDEDCVKILAQCRKAIPPREEGGKVIIIEIVVG 475
Query: 623 HS 628
S
Sbjct: 476 PS 481
Score = 68.4 bits (143), Expect(4) = 9e-025
Identities = 33/57 (57%), Positives = 39/57 (68%)
Frame = -3 / -1
Query: 612 MSPIITFPPSFREGIAFRH*ARSLTHSSSVRWCSTSFSTTV*AGGMKLNMSPST*FI 442
+S IITFPPS R G+AF H AR T SSS++ CSTS S T * GG N SP+T* +
Sbjct: 465 ISMIITFPPSSRGGMAFLHWARIFTQSSSLQKCSTSLSITT*DGGTVWNRSPAT*LM 295
Score = 47.8 bits (98), Expect(4) = 4e-038
Identities = 17/39 (43%), Positives = 24/39 (61%)
Frame = +2 / +2
Query: 221 MASDALDTHDNFGVEMALREFRDLFEGIQSMTYCCGNFG 337
+ + L HDN G+ LRE D+F+G+ S+T CCG G
Sbjct: 83 VCNQGLAAHDNLGIATILRECGDIFKGLDSLTDCCGGDG 199
Score = 42.3 bits (86), Expect(4) = 4e-038
Identities = 17/30 (56%), Positives = 20/30 (66%)
Frame = +2 / +2
Query: 635 MLETQLLMDIGMMTMTKGRQHDEKEWRQLF 724
M E QLLMD+ MM T+G Q DE W +LF
Sbjct: 494 MFEAQLLMDMLMMVNTRGGQRDENHWCELF 583
Score = 42.3 bits (86), Expect(4) = 4e-038
Identities = 18/35 (51%), Positives = 20/35 (57%)
Frame = +2 / +2
Query: 335 GDDKGARAIAKAFPHIKCTVLXXXXXXXXXXXDGV 439
GD ARA+ KA+PHIKCTVL DGV
Sbjct: 191 GDGTTARALVKAYPHIKCTVLDLPKVVEKAPADGV 295
Score = 35.9 bits (72), Expect(4) = 9e-025
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = -2 / -3
Query: 718 LTPFFFVVLSSFCHGHHADVHQELSFQH 635
LTP F+ L+ HH +HQEL F+H
Sbjct: 577 LTPVIFITLTPSRVHHHEHIHQELGFKH 494
Score = 33.6 bits (67), Expect(4) = 9e-025
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = -3 / -1
Query: 444 IFTPSAGLAAMILGGASTVHFMCG 373
+ TPSAG + G ++TVH MCG
Sbjct: 300 LMTPSAGAFSTTFGRSNTVHLMCG 229
Score = 30.9 bits (61), Expect(4) = 9e-025
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = -3 / -1
Query: 324 QQ*VMDWIPSNKSLNSRSAISTPKLSWVSK 235
QQ V + P S +SRS ++ P+LSW +K
Sbjct: 186 QQSVRESSPLKMSPHSRSMVAIPRLSWAAK 97
>gb|BJ468231.1|BJ468231 BJ468231 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags37m03 3', mRNA sequence
Length = 626
Score = 84.5 bits (178), Expect(3) = 5e-038
Identities = 35/59 (59%), Positives = 42/59 (71%)
Frame = +2 / -3
Query: 635 MLETQLLMDIGMMTMTKGRQHDEKEWRQLFTKAGFSEYKILKEFGTRVAFEVYP*DIYL 811
M E QLLMD+ MM T+G Q DE W +LF KAGF++YKI+K+ G R EVYP*DI L
Sbjct: 357 MFEAQLLMDMLMMVNTRGGQRDENHWCELFKKAGFTDYKIVKKLGARSVIEVYP*DIVL 181
Score = 82.2 bits (173), Expect(3) = 5e-038
Identities = 33/62 (53%), Positives = 44/62 (70%)
Frame = +2 / -3
Query: 443 INYVEGDMFSFIPPAQTXXXXXXXXXXTDEECVKLLAQCRKAIPSRKDGGKVIIGDIMID 622
INYV GD+F +PP+Q +DE+CVK+LAQCRKAIP R++GGKVII +I++
Sbjct: 555 INYVAGDLFHTVPPSQVVMLKLVLHFWSDEDCVKILAQCRKAIPPREEGGKVIIIEIVVG 376
Query: 623 HS 628
S
Sbjct: 375 PS 370
Score = 68.4 bits (143), Expect(3) = 3e-026
Identities = 33/57 (57%), Positives = 39/57 (68%)
Frame = -3 / +2
Query: 612 MSPIITFPPSFREGIAFRH*ARSLTHSSSVRWCSTSFSTTV*AGGMKLNMSPST*FI 442
+S IITFPPS R G+AF H AR T SSS++ CSTS S T * GG N SP+T* +
Sbjct: 386 ISMIITFPPSSRGGMAFLHWARIFTQSSSLQKCSTSLSITT*DGGTVWNRSPAT*LM 556
Score = 54.7 bits (113), Expect(3) = 3e-026
Identities = 30/65 (46%), Positives = 38/65 (58%)
Frame = -3 / +2
Query: 828 MHTYVCKYISHG*TSKATRVPNSLRILYSLNPALVKS*RHSFSSCCRPFVMVIMPMSIRS 649
++ Y+ IS+G*TS R PN IL S+NPA + S FSS P V IM +SIRS
Sbjct: 164 LYFYL*STISYG*TSMTDRAPNFFTIL*SVNPAFLNSSHQ*FSSR*PPLVFTIMSISIRS 343
Query: 648 *VSSI 634
S+I
Sbjct: 344 WASNI 358
Score = 33.6 bits (67), Expect(3) = 3e-026
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = -3 / +2
Query: 444 IFTPSAGLAAMILGGASTVHFMCG 373
+ TPSAG + G ++TVH MCG
Sbjct: 551 LMTPSAGAFSTTFGRSNTVHLMCG 622
Score = 29.9 bits (59), Expect(3) = 5e-038
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = +1 / -2
Query: 370 LPTHKMHCAGPSQDHCRQTG*WS 438
L H++HC GPS+ + *WS
Sbjct: 625 LSAHQVHCVGPSKGGRKSPS*WS 557
>gb|BJ463550.1|BJ463550 BJ463550 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags32h07 5', mRNA sequence
Length = 540
Score = 84.5 bits (178), Expect(3) = 5e-038
Identities = 35/59 (59%), Positives = 42/59 (71%)
Frame = +2 / +2
Query: 635 MLETQLLMDIGMMTMTKGRQHDEKEWRQLFTKAGFSEYKILKEFGTRVAFEVYP*DIYL 811
M E QLLMD+ MM T+G Q DE W +LF KAGF++YKI+K+ G R EVYP*DI L
Sbjct: 305 MFEAQLLMDMLMMVNTRGGQRDENHWCELFKKAGFTDYKIVKKLGARSVIEVYP*DIVL 481
Score = 80.3 bits (169), Expect(3) = 5e-038
Identities = 32/61 (52%), Positives = 43/61 (70%)
Frame = +2 / +2
Query: 446 NYVEGDMFSFIPPAQTXXXXXXXXXXTDEECVKLLAQCRKAIPSRKDGGKVIIGDIMIDH 625
NYV GD+F +PP+Q +DE+CVK+LAQCRKAIP R++GGKVII +I++
Sbjct: 110 NYVAGDLFHTVPPSQVVMLKLVLHFWSDEDCVKILAQCRKAIPPREEGGKVIIIEIVVGP 289
Query: 626 S 628
S
Sbjct: 290 S 292
Score = 68.0 bits (142), Expect(3) = 7e-026
Identities = 33/55 (60%), Positives = 38/55 (69%)
Frame = -3 / -1
Query: 612 MSPIITFPPSFREGIAFRH*ARSLTHSSSVRWCSTSFSTTV*AGGMKLNMSPST* 448
+S IITFPPS R G+AF H AR T SSS++ CSTS S T * GG N SP+T*
Sbjct: 276 ISMIITFPPSSRGGMAFLHWARIFTQSSSLQKCSTSLSITT*DGGTVWNRSPAT* 112
Score = 54.7 bits (113), Expect(3) = 7e-026
Identities = 30/65 (46%), Positives = 38/65 (58%)
Frame = -3 / -1
Query: 828 MHTYVCKYISHG*TSKATRVPNSLRILYSLNPALVKS*RHSFSSCCRPFVMVIMPMSIRS 649
++ Y+ IS+G*TS R PN IL S+NPA + S FSS P V IM +SIRS
Sbjct: 498 LYFYL*STISYG*TSMTDRAPNFFTIL*SVNPAFLNSSHQ*FSSR*PPLVFTIMSISIRS 319
Query: 648 *VSSI 634
S+I
Sbjct: 318 WASNI 304
Score = 32.7 bits (65), Expect(3) = 7e-026
Identities = 12/22 (54%), Positives = 15/22 (68%)
Frame = -3 / -3
Query: 438 TPSAGLAAMILGGASTVHFMCG 373
TPSAG + G ++TVH MCG
Sbjct: 106 TPSAGAFSTTFGRSNTVHLMCG 41
Score = 31.8 bits (63), Expect(3) = 5e-038
Identities = 13/25 (52%), Positives = 14/25 (56%)
Frame = +2 / +3
Query: 365 KAFPHIKCTVLXXXXXXXXXXXDGV 439
KA+PHIKCTVL DGV
Sbjct: 33 KAYPHIKCTVLDLPKVVEKAPADGV 107
>gb|AV919708.1|AV919708 AV919708 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags7e03 3', mRNA sequence
Length = 624
Score = 87.7 bits (185), Expect(4) = 1e-037
Identities = 35/64 (54%), Positives = 44/64 (68%)
Frame = +2 / -1
Query: 146 SPFEELHGATLFHESMGSLDADFHDMASDALDTHDNFGVEMALREFRDLFEGIQSMTYCC 325
SPFE++HGATLF ESM LD + M +AL HD+ G+ LRE DLF+G+QS+T CC
Sbjct: 474 SPFEDVHGATLFEESMALLDPESDKMFHEALAAHDHLGIGTILRECHDLFKGVQSLTDCC 295
Query: 326 GNFG 337
G G
Sbjct: 294 GGDG 283
Score = 65.7 bits (137), Expect(4) = 7e-026
Identities = 31/60 (51%), Positives = 38/60 (63%)
Frame = -3 / +2
Query: 324 QQ*VMDWIPSNKSLNSRSAISTPKLSWVSKASLAMSWKSASRLPMLSWNRVAPCSSSNGD 145
QQ V DW P NKS +SR+ + PK SW +KAS + S SR +LS VAP +SSNGD
Sbjct: 296 QQSVSDWTPLNKSWHSRNIVPIPKWSWAAKASWNILSDSGSRSAILSSKSVAP*TSSNGD 475
Score = 52.4 bits (108), Expect(4) = 1e-037
Identities = 21/44 (47%), Positives = 29/44 (65%)
Frame = +2 / -1
Query: 20 LVEGIPHEDHMNHTSFVLTCTSSRYIEPAIGLAEWFRKDTATSP 151
LV+G+ + + + VLT TS YIE A+GLA+WF+KD A P
Sbjct: 606 LVDGVFIDGEASQKAIVLTTTSRHYIEAALGLADWFKKDIAPPP 475
Score = 46.9 bits (96), Expect(4) = 7e-026
Identities = 25/48 (52%), Positives = 29/48 (60%)
Frame = -3 / +2
Query: 162 SSSNGDVAVSFLNHSASPIAGSM*RDEVQVSTKEVWFMWSS*GMPSTR 19
S+ +G A+SFLN SASP A SM* EV VST W S PST+
Sbjct: 464 SNGDGGGAMSFLNQSASPKAASM*CLEVVVSTMAFWLASPSMNTPSTK 607
Score = 41.4 bits (84), Expect(4) = 1e-037
Identities = 18/35 (51%), Positives = 19/35 (54%)
Frame = +2 / -1
Query: 335 GDDKGARAIAKAFPHIKCTVLXXXXXXXXXXXDGV 439
GD ARAI KAFPHIKC VL DG+
Sbjct: 291 GDGTTARAIVKAFPHIKCNVLDLPKVIEKVPSDGI 187
Score = 31.8 bits (63), Expect(4) = 1e-037
Identities = 11/16 (68%), Positives = 13/16 (81%)
Frame = +2 / -1
Query: 443 INYVEGDMFSFIPPAQ 490
+NYV GD+F IPPAQ
Sbjct: 186 VNYVAGDLFHAIPPAQ 139
Score = 31.8 bits (63), Expect(4) = 7e-026
Identities = 12/23 (52%), Positives = 12/23 (52%)
Frame = -1 / +3
Query: 404 EGPAQCILCVGRPWQWPWHPCHH 336
EGP C GRP QWP HH
Sbjct: 222 EGPTHCT*YAGRP*QWP*LSFHH 290
Score = 28.1 bits (55), Expect(4) = 7e-026
Identities = 11/18 (61%), Positives = 14/18 (77%)
Frame = -2 / +1
Query: 499 HDSLSRWNETEHVTFDIV 446
H++LSRWN E VT +IV
Sbjct: 130 HENLSRWNGME*VTSNIV 183
>gb|AV921748.1|AV921748 AV921748 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags12j23 3', mRNA sequence
Length = 659
Score = 84.5 bits (178), Expect(3) = 1e-037
Identities = 35/59 (59%), Positives = 42/59 (71%)
Frame = +2 / -1
Query: 635 MLETQLLMDIGMMTMTKGRQHDEKEWRQLFTKAGFSEYKILKEFGTRVAFEVYP*DIYL 811
M E QLLMD+ MM T+G Q DE W +LF KAGF++YKI+K+ G R EVYP*DI L
Sbjct: 392 MFEAQLLMDMLMMVNTRGGQRDENHWCELFKKAGFTDYKIVKKLGARSVIEVYP*DIVL 216
Score = 82.2 bits (173), Expect(3) = 1e-037
Identities = 33/62 (53%), Positives = 44/62 (70%)
Frame = +2 / -1
Query: 443 INYVEGDMFSFIPPAQTXXXXXXXXXXTDEECVKLLAQCRKAIPSRKDGGKVIIGDIMID 622
INYV GD+F +PP+Q +DE+CVK+LAQCRKAIP R++GGKVII +I++
Sbjct: 590 INYVAGDLFHTVPPSQVVMLKLVLHFWSDEDCVKILAQCRKAIPPREEGGKVIIIEIVVG 411
Query: 623 HS 628
S
Sbjct: 410 PS 405
Score = 68.4 bits (143), Expect(3) = 3e-026
Identities = 33/57 (57%), Positives = 39/57 (68%)
Frame = -3 / +1
Query: 612 MSPIITFPPSFREGIAFRH*ARSLTHSSSVRWCSTSFSTTV*AGGMKLNMSPST*FI 442
+S IITFPPS R G+AF H AR T SSS++ CSTS S T * GG N SP+T* +
Sbjct: 421 ISMIITFPPSSRGGMAFLHWARIFTQSSSLQKCSTSLSITT*DGGTVWNRSPAT*LM 591
Score = 54.7 bits (113), Expect(3) = 3e-026
Identities = 30/65 (46%), Positives = 38/65 (58%)
Frame = -3 / +1
Query: 828 MHTYVCKYISHG*TSKATRVPNSLRILYSLNPALVKS*RHSFSSCCRPFVMVIMPMSIRS 649
++ Y+ IS+G*TS R PN IL S+NPA + S FSS P V IM +SIRS
Sbjct: 199 LYFYL*STISYG*TSMTDRAPNFFTIL*SVNPAFLNSSHQ*FSSR*PPLVFTIMSISIRS 378
Query: 648 *VSSI 634
S+I
Sbjct: 379 WASNI 393
Score = 33.6 bits (67), Expect(3) = 3e-026
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = -3 / +1
Query: 444 IFTPSAGLAAMILGGASTVHFMCG 373
+ TPSAG + G ++TVH MCG
Sbjct: 586 LMTPSAGAFSTTFGRSNTVHLMCG 657
Score = 28.6 bits (56), Expect(3) = 1e-037
Identities = 9/20 (45%), Positives = 13/20 (65%)
Frame = +1 / -3
Query: 379 HKMHCAGPSQDHCRQTG*WS 438
H++HC GPS+ + *WS
Sbjct: 651 HQVHCVGPSKGGRKSPS*WS 592
>gb|BF259348.2|BF259348 HVSMEf0019F16f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEf0019F16f, mRNA sequence
Length = 574
Score = 78.0 bits (164), Expect(3) = 8e-022
Identities = 33/69 (47%), Positives = 45/69 (65%)
Frame = +2 / +3
Query: 587 GGKVIIGDIMIDHSGPMLETQLLMDIGMMTMTKGRQHDEKEWRQLFTKAGFSEYKILKEF 766
G +II ++ + ET+LLMD+ M T+GRQ +EKEW LF KAGFS+Y+I+K+
Sbjct: 366 GKVIIIDIVLGSSLATITETELLMDMLMFICTRGRQRNEKEWSMLFMKAGFSDYEIIKKL 545
Query: 767 GTRVAFEVY 793
G R EVY
Sbjct: 546 GHRGVIEVY 572
Score = 78.0 bits (164), Expect(4) = 2e-036
Identities = 31/62 (50%), Positives = 42/62 (67%)
Frame = +2 / +3
Query: 443 INYVEGDMFSFIPPAQTXXXXXXXXXXTDEECVKLLAQCRKAIPSRKDGGKVIIGDIMID 622
+NYV GD+ +PPAQ +DE+C+ +LAQC+KAIPSR+ GGKVII DI++
Sbjct: 219 VNYVAGDLLHTVPPAQAVMLKLVLHFWSDEDCINILAQCKKAIPSREMGGKVIIIDIVLG 398
Query: 623 HS 628
S
Sbjct: 399 SS 404
Score = 65.7 bits (137), Expect(4) = 3e-029
Identities = 32/55 (58%), Positives = 37/55 (67%)
Frame = -3 / -1
Query: 612 MSPIITFPPSFREGIAFRH*ARSLTHSSSVRWCSTSFSTTV*AGGMKLNMSPST* 448
MS +ITFPP EG+AF H*AR L SSS++ C TS S T *AGG SP+T*
Sbjct: 388 MSMMITFPPISLEGMAFLH*ARMLMQSSSLQKCRTSLSITA*AGGTVCKRSPAT* 224
Score = 54.2 bits (112), Expect(4) = 3e-029
Identities = 22/53 (41%), Positives = 30/53 (56%)
Frame = -2 / -3
Query: 793 IDFEGNTSSKFLENLVFAEPCFGEELTPFFFVVLSSFCHGHHADVHQELSFQH 635
I + T KFL+NL+ A+PCF +E P F+ L S H VHQ+ SF +
Sbjct: 572 IYLDDTTMPKFLDNLIVAKPCFHKEHAPLLFIALPSSGTYEHQHVHQQFSFSY 414
Score = 51.0 bits (105), Expect(4) = 2e-036
Identities = 19/36 (52%), Positives = 25/36 (69%)
Frame = +2 / +3
Query: 230 DALDTHDNFGVEMALREFRDLFEGIQSMTYCCGNFG 337
+AL HD+ G+ LRE R LF+G+QS+T CCG G
Sbjct: 15 EALAAHDHMGIGTVLRECRGLFDGLQSLTDCCGGDG 122
Score = 41.8 bits (85), Expect(4) = 2e-036
Identities = 19/35 (54%), Positives = 19/35 (54%)
Frame = +2 / +3
Query: 335 GDDKGARAIAKAFPHIKCTVLXXXXXXXXXXXDGV 439
GD ARAI KAFPHIKC VL DGV
Sbjct: 114 GDGTTARAIVKAFPHIKCNVLDLPKVIDKVPSDGV 218
Score = 38.2 bits (77), Expect(4) = 2e-036
Identities = 19/47 (40%), Positives = 26/47 (55%)
Frame = +1 / +2
Query: 655 DGHRHDDHDKRTTARRKRMASALHQSRVQRIQDSQGIWNSCCLRSLS 795
DGH +RT + K + AL++SRV R+ D Q W S C R +S
Sbjct: 434 DGHADVHMYQRTATQ*KGVEHALYESRV*RL*DYQETWASWCHRGIS 574
Score = 34.5 bits (69), Expect(4) = 3e-029
Identities = 15/32 (46%), Positives = 20/32 (62%)
Frame = -3 / -1
Query: 324 QQ*VMDWIPSNKSLNSRSAISTPKLSWVSKAS 229
QQ V D PSN+ +SRS + P SW ++AS
Sbjct: 109 QQSVSDCRPSNRPRHSRSTVPIPIWSWAARAS 14
Score = 34.5 bits (69), Expect(3) = 8e-022
Identities = 20/55 (36%), Positives = 29/55 (52%)
Frame = +1 / +2
Query: 448 LCRR*HVQFHSTCSNCRAKACAAPPDR*GVRQASGSMPEGDSFTEGWRESYNR*H 612
LCR * + T S+ A+AC+ + *G+ Q SM EG +F R+S + H
Sbjct: 224 LCRW*PLAHRPTSSSRDAQACSTLLE**GLHQHPRSMQEGHTFQRNGRKSDHHRH 388
Score = 29.9 bits (59), Expect(4) = 3e-029
Identities = 10/23 (43%), Positives = 12/23 (52%)
Frame = -1 / -2
Query: 401 GPAQCILCVGRPWQWPWHPCHHQ 333
GP C GRP +WP HH+
Sbjct: 180 GPTHCT*YAGRP*RWPLPSSHHR 112
Score = 29.0 bits (57), Expect(3) = 8e-022
Identities = 12/25 (48%), Positives = 14/25 (56%)
Frame = +3 / +1
Query: 336 VMTRVPGPLPRPSHT*NALCWPLPR 410
VM R GP RPS +A+CW R
Sbjct: 115 VMGRRQGPSSRPSRISSAMCWTSQR 189
>gb|BJ466406.1|BJ466406 BJ466406 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags31p18 3', mRNA sequence
Length = 613
Score = 77.6 bits (163), Expect(3) = 2e-036
Identities = 29/62 (46%), Positives = 43/62 (69%)
Frame = +2 / -2
Query: 443 INYVEGDMFSFIPPAQTXXXXXXXXXXTDEECVKLLAQCRKAIPSRKDGGKVIIGDIMID 622
+NYV GD+F +P AQ +D++CVK+L QC+ AIPSR++GGKVI+ DI+++
Sbjct: 516 VNYVAGDLFHTVPKAQAVMLKLVLHHWSDDDCVKILTQCKNAIPSREEGGKVIVIDIVVE 337
Query: 623 HS 628
S
Sbjct: 336 PS 331
Score = 77.1 bits (162), Expect(3) = 2e-036
Identities = 30/57 (52%), Positives = 39/57 (68%)
Frame = +2 / -2
Query: 635 MLETQLLMDIGMMTMTKGRQHDEKEWRQLFTKAGFSEYKILKEFGTRVAFEVYP*DI 805
M E Q LMD+ M+ T+GRQ E +WR LF KAGF++YKI+K+ G R EVY * +
Sbjct: 318 MFEAQTLMDMLMLVFTRGRQRSENDWRDLFMKAGFTDYKIIKKMGARGVIEVYK*SL 148
Score = 73.0 bits (153), Expect(3) = 4e-026
Identities = 34/58 (58%), Positives = 39/58 (67%)
Frame = -3 / +2
Query: 621 SIIMSPIITFPPSFREGIAFRH*ARSLTHSSSVRWCSTSFSTTV*AGGMKLNMSPST* 448
S +S ITFPPS REG+AF H R T SSS++WCSTS S T *A G N SP+T*
Sbjct: 338 STTISMTITFPPSSREGMAFLHWVRIFTQSSSLQWCSTSLSITA*AFGTVWNRSPAT* 511
Score = 52.8 bits (109), Expect(3) = 4e-026
Identities = 19/53 (35%), Positives = 30/53 (56%)
Frame = -2 / +1
Query: 793 IDFEGNTSSKFLENLVFAEPCFGEELTPFFFVVLSSFCHGHHADVHQELSFQH 635
+D + + + FL+N V EPCF EE++P F L++ H VH+ L +H
Sbjct: 160 VDLDDTSCTHFLDNFVVGEPCFHEEVSPVIFATLTAPREHKHEHVHESLGLKH 318
Score = 36.3 bits (73), Expect(3) = 2e-036
Identities = 14/18 (77%), Positives = 15/18 (83%)
Frame = +2 / -2
Query: 344 KGARAIAKAFPHIKCTVL 397
K ARAI KA PH+KCTVL
Sbjct: 612 KTARAITKAHPHVKCTVL 559
Score = 30.4 bits (60), Expect(3) = 4e-026
Identities = 12/22 (54%), Positives = 15/22 (68%)
Frame = -3 / +2
Query: 438 TPSAGLAAMILGGASTVHFMCG 373
T S G+ +M LG +STVH CG
Sbjct: 518 TQSDGVFSMTLGRSSTVHLTCG 583
>gb|CB879386.1|CB879386 HP02A07w HP Hordeum vulgare subsp. vulgare cDNA clone HP02A07
3-PRIME, mRNA sequence
Length = 539
Score = 73.5 bits (154), Expect(4) = 3e-036
Identities = 30/59 (50%), Positives = 42/59 (71%)
Frame = +2 / -2
Query: 587 GGKVIIGDIMIDHSGPMLETQLLMDIGMMTMTKGRQHDEKEWRQLFTKAGFSEYKILKE 763
G ++I ++ S MLETQLL+D+ M+ T+GRQ DE +W +FTKAGFS YKI+K+
Sbjct: 178 GKVIVIDIVVGSSSKEMLETQLLVDMLMLVCTRGRQRDENDWSTIFTKAGFSGYKIVKK 2
Score = 65.2 bits (136), Expect(4) = 5e-026
Identities = 31/55 (56%), Positives = 38/55 (69%)
Frame = -3 / +3
Query: 612 MSPIITFPPSFREGIAFRH*ARSLTHSSSVRWCSTSFSTTV*AGGMKLNMSPST* 448
+S ITFPP R+G+AF H*AR L SSS++ C TS S *AGG+ N SP+T*
Sbjct: 156 ISMTITFPPISRDGMAFLH*ARILMQSSSLQKCRTSLSMRT*AGGIAWNRSPAT* 320
Score = 51.5 bits (106), Expect(4) = 3e-036
Identities = 19/36 (52%), Positives = 25/36 (69%)
Frame = +2 / -2
Query: 230 DALDTHDNFGVEMALREFRDLFEGIQSMTYCCGNFG 337
+AL HD+ G+ LRE DLF+G+QS+T CCG G
Sbjct: 529 EALAAHDHLGIGTILRECHDLFKGVQSLTDCCGGDG 422
Score = 45.5 bits (93), Expect(4) = 5e-026
Identities = 18/32 (56%), Positives = 22/32 (68%)
Frame = -3 / +3
Query: 324 QQ*VMDWIPSNKSLNSRSAISTPKLSWVSKAS 229
QQ V DW P NKS +SR+ + PK SW +KAS
Sbjct: 435 QQSVSDWTPLNKSWHSRNIVPIPKWSWAAKAS 530
Score = 41.8 bits (85), Expect(4) = 3e-036
Identities = 22/51 (43%), Positives = 29/51 (56%)
Frame = +1 / -1
Query: 448 LCRR*HVQFHSTCSNCRAKACAAPPDR*GVRQASGSMPEGDSFTEGWRESY 600
LCR * + +STCS+ A AC+A + * + Q SGSM EG S + Y
Sbjct: 320 LCRW*PIPCYSTCSSSHA*ACSALLE**RLHQYSGSMQEGHSVPRNGGKGY 168
Score = 41.4 bits (84), Expect(4) = 3e-036
Identities = 18/35 (51%), Positives = 19/35 (54%)
Frame = +2 / -2
Query: 335 GDDKGARAIAKAFPHIKCTVLXXXXXXXXXXXDGV 439
GD ARAI KAFPHIKC VL DG+
Sbjct: 430 GDGTTARAIVKAFPHIKCNVLDLPKVIEKVPSDGI 326
Score = 35.4 bits (71), Expect(4) = 5e-026
Identities = 22/42 (52%), Positives = 24/42 (57%)
Frame = -3 / +3
Query: 759 LRILYSLNPALVKS*RHSFSSCCRPFVMVIMPMSIRS*VSSI 634
L IL LNPA VK SFSS RP V M +S S VS+I
Sbjct: 6 LTIL*PLNPAFVKIVLQSFSSR*RPLVHTNMSISTNSWVSNI 131
Score = 26.7 bits (52), Expect(4) = 5e-026
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = -1 / +1
Query: 404 EGPAQCILCVGRPWQWPWHPCHH 336
EGP GRP QWP HH
Sbjct: 361 EGPTHYT*YAGRP*QWP*LSFHH 429
>gb|BJ468058.1|BJ468058 BJ468058 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags30o16 3', mRNA sequence
Length = 674
Score = 78.5 bits (165), Expect(3) = 5e-036
Identities = 32/57 (56%), Positives = 38/57 (66%)
Frame = +2 / -2
Query: 635 MLETQLLMDIGMMTMTKGRQHDEKEWRQLFTKAGFSEYKILKEFGTRVAFEVYP*DI 805
M E Q LMDI M+ T+GRQ E +W LFTKAGFS+YKI+K G R EVY * +
Sbjct: 391 MFEAQTLMDILMLVFTRGRQRSESDWHVLFTKAGFSDYKIVKRLGARGVIEVYK*TV 221
Score = 77.1 bits (162), Expect(3) = 5e-036
Identities = 29/62 (46%), Positives = 43/62 (69%)
Frame = +2 / -2
Query: 443 INYVEGDMFSFIPPAQTXXXXXXXXXXTDEECVKLLAQCRKAIPSRKDGGKVIIGDIMID 622
+NYV GD+F +P AQ +D++CVK+L QC+ AIPSR++GGKVI+ DI+++
Sbjct: 589 VNYVGGDLFHTVPKAQAVMLKLVLHHWSDDDCVKILTQCKNAIPSREEGGKVIVIDIVVE 410
Query: 623 HS 628
S
Sbjct: 409 PS 404
Score = 72.5 bits (152), Expect(3) = 2e-025
Identities = 34/58 (58%), Positives = 38/58 (65%)
Frame = -3 / +3
Query: 621 SIIMSPIITFPPSFREGIAFRH*ARSLTHSSSVRWCSTSFSTTV*AGGMKLNMSPST* 448
S MS ITFPPS REG+AF H R T SSS++WC+TS S T *A G N SP T*
Sbjct: 411 STTMSMTITFPPSSREGMAFLHWVRIFTQSSSLQWCNTSLSITA*AFGTVWNRSPPT* 584
Score = 48.7 bits (100), Expect(3) = 2e-025
Identities = 19/55 (34%), Positives = 29/55 (52%)
Frame = -2 / +2
Query: 799 SRIDFEGNTSSKFLENLVFAEPCFGEELTPFFFVVLSSFCHGHHADVHQELSFQH 635
S +D + + ++ +N + AEPCFGE P F L++ H VHQ L +H
Sbjct: 227 SLVDLDNTSCTQSFDNFIIAEPCFGE*HMPVTFTTLTASREDKHEYVHQSLRLKH 391
Score = 34.1 bits (68), Expect(3) = 5e-036
Identities = 14/28 (50%), Positives = 15/28 (53%)
Frame = +2 / -2
Query: 356 AIAKAFPHIKCTVLXXXXXXXXXXXDGV 439
AI KA PHIKCTVL DG+
Sbjct: 673 AITKAHPHIKCTVLDLPKVIDKTSADGI 590
Score = 32.2 bits (64), Expect(3) = 2e-025
Identities = 12/21 (57%), Positives = 16/21 (76%)
Frame = -3 / +3
Query: 435 PSAGLAAMILGGASTVHFMCG 373
PSA + ++ LG +STVH MCG
Sbjct: 594 PSAEVLSITLGRSSTVHLMCG 656
>gb|CD663904.1|CD663904 UCRHV18_07ab10_b1 Drought-stressed Dicktoo barley epidermis cDNA
library Hordeum vulgare subsp. vulgare cDNA clone
UCRHV18_07ab10, mRNA sequence
Length = 614
Score = 87.2 bits (184), Expect(2) = 1e-035
Identities = 36/59 (61%), Positives = 44/59 (74%)
Frame = +2 / -1
Query: 626 SGPMLETQLLMDIGMMTMTKGRQHDEKEWRQLFTKAGFSEYKILKEFGTRVAFEVYP*D 802
S MLETQLL+D+ M+ T+GRQ DE +W +FTKAGFS YKI+K+ G R EVYP*D
Sbjct: 392 SKEMLETQLLVDMLMLVCTRGRQRDENDWSTIFTKAGFSGYKIVKKLGPRGVIEVYP*D 216
Score = 83.5 bits (176), Expect(2) = 1e-035
Identities = 32/61 (52%), Positives = 43/61 (70%)
Frame = +2 / -2
Query: 443 INYVEGDMFSFIPPAQTXXXXXXXXXXTDEECVKLLAQCRKAIPSRKDGGKVIIGDIMID 622
+NYV GD+F IPPAQ +DE+C+ +LAQC+KAIPSR+ GGKVI+ DI++
Sbjct: 577 VNYVAGDLFHAIPPAQVLMLKLVLHFWSDEDCINILAQCKKAIPSREMGGKVIVIDIVVG 398
Query: 623 H 625
H
Sbjct: 397 H 395
>gb|BF253494.2|BF253494 HVSMEf0001B12f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEf0001B12f, mRNA sequence
Length = 556
Score = 74.8 bits (157), Expect(5) = 2e-035
Identities = 28/58 (48%), Positives = 39/58 (67%)
Frame = +2 / +1
Query: 449 YVEGDMFSFIPPAQTXXXXXXXXXXTDEECVKLLAQCRKAIPSRKDGGKVIIGDIMID 622
YV GD+F +PPAQ +DE+C+K+LAQC+KA+PSR GGKVI ++ +D
Sbjct: 229 YVSGDLFHVVPPAQAVLLKLVLHFWSDEDCIKILAQCKKAVPSRDAGGKVIFINLCLD 402
Score = 63.8 bits (133), Expect(4) = 2e-021
Identities = 29/50 (58%), Positives = 33/50 (66%)
Frame = -3 / -3
Query: 600 ITFPPSFREGIAFRH*ARSLTHSSSVRWCSTSFSTTV*AGGMKLNMSPST 451
+TFPP+ REG AF H AR L SSS++ C TS S T *AGG N SP T
Sbjct: 380 MTFPPASREGTAFLHCARILMQSSSLQKCRTSLSNTA*AGGTTWNRSPET 231
Score = 45.5 bits (93), Expect(5) = 2e-035
Identities = 17/36 (47%), Positives = 25/36 (69%)
Frame = +2 / +1
Query: 230 DALDTHDNFGVEMALREFRDLFEGIQSMTYCCGNFG 337
DA+ HD+ G+ LR+ R+LFEG++S+T C G G
Sbjct: 10 DAVAAHDHMGIGPVLRQCRELFEGLESLTDCGGGDG 117
Score = 38.6 bits (78), Expect(5) = 2e-035
Identities = 16/23 (69%), Positives = 19/23 (82%)
Frame = +2 / +3
Query: 626 SGPMLETQLLMDIGMMTMTKGRQ 694
SGPMLETQ LMD+ M+ MT+G Q
Sbjct: 408 SGPMLETQHLMDMLMLVMTRGPQ 476
Score = 35.4 bits (71), Expect(4) = 2e-021
Identities = 12/23 (52%), Positives = 14/23 (60%)
Frame = -1 / -1
Query: 404 EGPAQCILCVGRPWQWPWHPCHH 336
EG A+C C GRP +W CHH
Sbjct: 178 EGRARCS*CAGRPRRWTSPSCHH 110
Score = 35.4 bits (71), Expect(5) = 2e-035
Identities = 13/21 (61%), Positives = 16/21 (76%)
Frame = +2 / +1
Query: 335 GDDKGARAIAKAFPHIKCTVL 397
GD AR+I +A+PHI CTVL
Sbjct: 109 GDGTTARSIVEAYPHINCTVL 171
Score = 30.9 bits (61), Expect(4) = 2e-021
Identities = 13/23 (56%), Positives = 16/23 (69%)
Frame = -3 / -1
Query: 693 CRPFVMVIMPMSIRS*VSSIGPE 625
C P V+ M +S+R VSSIGPE
Sbjct: 475 CGPLVITSMSISMRCWVSSIGPE 407
Score = 28.1 bits (55), Expect(5) = 2e-035
Identities = 8/18 (44%), Positives = 13/18 (72%)
Frame = +2 / +1
Query: 683 KGRQHDEKEWRQLFTKAG 736
+ +EK+W ++FTKAG
Sbjct: 466 EAHNREEKDWSEIFTKAG 519
Score = 26.7 bits (52), Expect(4) = 2e-021
Identities = 12/23 (52%), Positives = 14/23 (60%)
Frame = -2 / -2
Query: 328 TAAVGHGLDPLEQVPELPQRHLD 260
TAAVG L PLEQ+ L + D
Sbjct: 108 TAAVGERLKPLEQLTALTEHGAD 40
>gb|BF258733.1|BF258733 HVSMEf0016I14f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEf0016I14f, mRNA sequence
Length = 964
Score = 81.3 bits (171), Expect(4) = 6e-035
Identities = 29/62 (46%), Positives = 42/62 (67%)
Frame = +2 / +1
Query: 152 FEELHGATLFHESMGSLDADFHDMASDALDTHDNFGVEMALREFRDLFEGIQSMTYCCGN 331
FE++H A+LFHES LD + + +D L+ HDN G+ +RE DLF+G++S+T CCG
Sbjct: 184 FEDVHSASLFHESTADLDPELDALVTDGLEAHDNLGMGTIMRECHDLFKGLESLTDCCGG 363
Query: 332 FG 337
G
Sbjct: 364 DG 369
Score = 57.4 bits (119), Expect(4) = 2e-025
Identities = 26/47 (55%), Positives = 31/47 (65%)
Frame = -3 / -2
Query: 594 FPPSFREGIAFRH*ARSLTHSSSVRWCSTSFSTTV*AGGMKLNMSPS 454
FPPS ++G+A H R T SSS++WCSTSFS T *A G N S S
Sbjct: 618 FPPSSQKGMAL*HWVRIFTQSSSLQWCSTSFSITA*AFGTVWNRSTS 478
Score = 46.9 bits (96), Expect(4) = 2e-025
Identities = 23/58 (39%), Positives = 33/58 (56%)
Frame = -3 / -3
Query: 324 QQ*VMDWIPSNKSLNSRSAISTPKLSWVSKASLAMSWKSASRLPMLSWNRVAPCSSSN 151
QQ V D P +S +SR + P+LSW S+ S+ + S S+ +LS A C+SSN
Sbjct: 356 QQSVRDSSPLKRSWHSRMMVPIPRLSWASRPSVTSASSSGSKSAVLS*KSDALCTSSN 183
Score = 46.0 bits (94), Expect(4) = 6e-035
Identities = 19/45 (42%), Positives = 26/45 (57%)
Frame = +2 / +2
Query: 461 DMFSFIPPAQTXXXXXXXXXXTDEECVKLLAQCRKAIPSRKDGGK 595
D+F +P A +D++CVK+L QC KAIP +DGGK
Sbjct: 485 DLFHTVPKA*AVMLKLVLHHWSDDDCVKILTQCYKAIPF*EDGGK 619
Score = 42.8 bits (87), Expect(4) = 6e-035
Identities = 16/32 (50%), Positives = 22/32 (68%)
Frame = +2 / +1
Query: 41 EDHMNHTSFVLTCTSSRYIEPAIGLAEWFRKD 136
E+H + TSFVL T Y+E A+ +AEWF+ D
Sbjct: 64 EEHHSQTSFVLAGTLPHYMEAALAMAEWFKID 159
Score = 37.3 bits (75), Expect(4) = 2e-025
Identities = 18/32 (56%), Positives = 20/32 (62%)
Frame = -3 / -3
Query: 135 SFLNHSASPIAGSM*RDEVQVSTKEVWFMWSS 40
S LNHSA A SM* +V STK+VW SS
Sbjct: 158 SILNHSAIASAASM*CGKVPASTKDVWLWCSS 63
Score = 33.6 bits (67), Expect(4) = 6e-035
Identities = 14/21 (66%), Positives = 15/21 (71%)
Frame = +2 / +1
Query: 335 GDDKGARAIAKAFPHIKCTVL 397
GD K ARAI KA P + CTVL
Sbjct: 361 GDGKTARAITKAHPLVMCTVL 423
Score = 29.0 bits (57), Expect(4) = 2e-025
Identities = 10/21 (47%), Positives = 11/21 (52%)
Frame = -1 / -1
Query: 398 PAQCILCVGRPWQWPWHPCHH 336
PA+C G PW WP HH
Sbjct: 424 PARCT*RAGAPW*WPSLSFHH 362
>gb|AV921351.1|AV921351 AV921351 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags23c06 3', mRNA sequence
Length = 657
Score = 78.5 bits (165), Expect(3) = 2e-034
Identities = 32/57 (56%), Positives = 38/57 (66%)
Frame = +2 / -2
Query: 635 MLETQLLMDIGMMTMTKGRQHDEKEWRQLFTKAGFSEYKILKEFGTRVAFEVYP*DI 805
M E Q LMDI M+ T+GRQ E +W LFTKAGFS+YKI+K G R EVY * +
Sbjct: 371 MFEAQTLMDILMLVFTRGRQRSESDWHVLFTKAGFSDYKIVKRLGARGVIEVYK*TV 201
Score = 77.1 bits (162), Expect(3) = 2e-034
Identities = 29/62 (46%), Positives = 43/62 (69%)
Frame = +2 / -2
Query: 443 INYVEGDMFSFIPPAQTXXXXXXXXXXTDEECVKLLAQCRKAIPSRKDGGKVIIGDIMID 622
+NYV GD+F +P AQ +D++CVK+L QC+ AIPSR++GGKVI+ DI+++
Sbjct: 569 VNYVGGDLFHTVPKAQAVMLKLVLHHWSDDDCVKILTQCKNAIPSREEGGKVIVIDIVVE 390
Query: 623 HS 628
S
Sbjct: 389 PS 384
Score = 72.5 bits (152), Expect(3) = 2e-025
Identities = 34/58 (58%), Positives = 38/58 (65%)
Frame = -3 / +1
Query: 621 SIIMSPIITFPPSFREGIAFRH*ARSLTHSSSVRWCSTSFSTTV*AGGMKLNMSPST* 448
S MS ITFPPS REG+AF H R T SSS++WC+TS S T *A G N SP T*
Sbjct: 391 STTMSMTITFPPSSREGMAFLHWVRIFTQSSSLQWCNTSLSITA*AFGTVWNRSPPT* 564
Score = 48.7 bits (100), Expect(3) = 2e-025
Identities = 19/55 (34%), Positives = 29/55 (52%)
Frame = -2 / +3
Query: 799 SRIDFEGNTSSKFLENLVFAEPCFGEELTPFFFVVLSSFCHGHHADVHQELSFQH 635
S +D + + ++ +N + AEPCFGE P F L++ H VHQ L +H
Sbjct: 207 SLVDLDNTSCTQSFDNFIIAEPCFGE*HMPVTFTTLTASREDKHEYVHQSLRLKH 371
Score = 32.2 bits (64), Expect(3) = 2e-025
Identities = 12/21 (57%), Positives = 16/21 (76%)
Frame = -3 / +1
Query: 435 PSAGLAAMILGGASTVHFMCG 373
PSA + ++ LG +STVH MCG
Sbjct: 574 PSAEVLSITLGRSSTVHLMCG 636
Score = 29.0 bits (57), Expect(3) = 2e-034
Identities = 11/25 (44%), Positives = 13/25 (52%)
Frame = +2 / -2
Query: 365 KAFPHIKCTVLXXXXXXXXXXXDGV 439
+A PHIKCTVL DG+
Sbjct: 644 RAHPHIKCTVLDLPKVIDKTSADGI 570
>gb|BJ467944.1|BJ467944 BJ467944 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags30g22 3', mRNA sequence
Length = 638
Score = 84.5 bits (178), Expect(2) = 2e-034
Identities = 35/59 (59%), Positives = 42/59 (71%)
Frame = +2 / -3
Query: 635 MLETQLLMDIGMMTMTKGRQHDEKEWRQLFTKAGFSEYKILKEFGTRVAFEVYP*DIYL 811
M E QLLMD+ MM T+G Q DE W +LF KAGF++YKI+K+ G R EVYP*DI L
Sbjct: 411 MFEAQLLMDMLMMVNTRGGQRDENHWCELFKKAGFTDYKIVKKLGARSVIEVYP*DIVL 235
Score = 82.2 bits (173), Expect(2) = 2e-034
Identities = 33/62 (53%), Positives = 44/62 (70%)
Frame = +2 / -3
Query: 443 INYVEGDMFSFIPPAQTXXXXXXXXXXTDEECVKLLAQCRKAIPSRKDGGKVIIGDIMID 622
INYV GD+F +PP+Q +DE+CVK+LAQCRKAIP R++GGKVII +I++
Sbjct: 609 INYVAGDLFHTVPPSQVVMLKLVLHFWSDEDCVKILAQCRKAIPPREEGGKVIIIEIVVG 430
Query: 623 HS 628
S
Sbjct: 429 PS 424
Score = 68.4 bits (143), Expect(2) = 2e-021
Identities = 33/57 (57%), Positives = 39/57 (68%)
Frame = -3 / +2
Query: 612 MSPIITFPPSFREGIAFRH*ARSLTHSSSVRWCSTSFSTTV*AGGMKLNMSPST*FI 442
+S IITFPPS R G+AF H AR T SSS++ CSTS S T * GG N SP+T* +
Sbjct: 440 ISMIITFPPSSRGGMAFLHWARIFTQSSSLQKCSTSLSITT*DGGTVWNRSPAT*LM 610
Score = 54.7 bits (113), Expect(2) = 2e-021
Identities = 30/65 (46%), Positives = 38/65 (58%)
Frame = -3 / +2
Query: 828 MHTYVCKYISHG*TSKATRVPNSLRILYSLNPALVKS*RHSFSSCCRPFVMVIMPMSIRS 649
++ Y+ IS+G*TS R PN IL S+NPA + S FSS P V IM +SIRS
Sbjct: 218 LYFYL*STISYG*TSMTDRAPNFFTIL*SVNPAFLNSSHQ*FSSR*PPLVFTIMSISIRS 397
Query: 648 *VSSI 634
S+I
Sbjct: 398 WASNI 412
>gb|BJ468232.1|BJ468232 BJ468232 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags37m04 3', mRNA sequence
Length = 568
Score = 84.5 bits (178), Expect(2) = 2e-034
Identities = 35/59 (59%), Positives = 42/59 (71%)
Frame = +2 / -3
Query: 635 MLETQLLMDIGMMTMTKGRQHDEKEWRQLFTKAGFSEYKILKEFGTRVAFEVYP*DIYL 811
M E QLLMD+ MM T+G Q DE W +LF KAGF++YKI+K+ G R EVYP*DI L
Sbjct: 356 MFEAQLLMDMLMMVNTRGGQRDENHWCELFKKAGFTDYKIVKKLGARSVIEVYP*DIVL 180
Score = 82.2 bits (173), Expect(2) = 2e-034
Identities = 33/62 (53%), Positives = 44/62 (70%)
Frame = +2 / -3
Query: 443 INYVEGDMFSFIPPAQTXXXXXXXXXXTDEECVKLLAQCRKAIPSRKDGGKVIIGDIMID 622
INYV GD+F +PP+Q +DE+CVK+LAQCRKAIP R++GGKVII +I++
Sbjct: 554 INYVAGDLFHTVPPSQVVMLKLVLHFWSDEDCVKILAQCRKAIPPREEGGKVIIIEIVVG 375
Query: 623 HS 628
S
Sbjct: 374 PS 369
Score = 68.0 bits (142), Expect(2) = 2e-021
Identities = 33/57 (57%), Positives = 39/57 (68%)
Frame = -3 / +1
Query: 612 MSPIITFPPSFREGIAFRH*ARSLTHSSSVRWCSTSFSTTV*AGGMKLNMSPST*FI 442
+S IITFPPS R G+AF H AR T SSS++ CSTS S T * GG N SP+T* +
Sbjct: 385 ISMIITFPPSSRGGMAFLHWARIXTQSSSLQKCSTSLSITT*DGGTVWNRSPAT*LM 555
Score = 54.7 bits (113), Expect(2) = 2e-021
Identities = 30/65 (46%), Positives = 38/65 (58%)
Frame = -3 / +1
Query: 828 MHTYVCKYISHG*TSKATRVPNSLRILYSLNPALVKS*RHSFSSCCRPFVMVIMPMSIRS 649
++ Y+ IS+G*TS R PN IL S+NPA + S FSS P V IM +SIRS
Sbjct: 163 LYFYL*STISYG*TSMTDRAPNFFTIL*SVNPAFLNSSHQ*FSSR*PPLVFTIMSISIRS 342
Query: 648 *VSSI 634
S+I
Sbjct: 343 WASNI 357
>gb|BF254372.2|BF254372 HVSMEf0003M21f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEf0003M21f, mRNA sequence
Length = 526
Score = 89.5 bits (189), Expect(2) = 2e-034
Identities = 34/56 (60%), Positives = 44/56 (78%)
Frame = +2 / +3
Query: 629 GPMLETQLLMDIGMMTMTKGRQHDEKEWRQLFTKAGFSEYKILKEFGTRVAFEVYP 796
G MLETQ LMD+ M+ MT+GRQ +EK+W ++FTKAGFS YKI+K+ G R +VYP
Sbjct: 258 GQMLETQHLMDMLMLVMTRGRQREEKDWSEIFTKAGFSGYKIVKKLGARAVIDVYP 425
Score = 76.7 bits (161), Expect(2) = 2e-034
Identities = 28/59 (47%), Positives = 40/59 (67%)
Frame = +2 / +2
Query: 443 INYVEGDMFSFIPPAQTXXXXXXXXXXTDEECVKLLAQCRKAIPSRKDGGKVIIGDIMI 619
+ YV GD+F +PPAQ +DE+C+K+LAQC+KA+P R GGKVI+ DI++
Sbjct: 68 VKYVSGDLFHVVPPAQAVLLKLVLHFWSDEDCIKILAQCKKAVPPRDAGGKVIVIDIVL 244
Score = 63.4 bits (132), Expect(2) = 4e-022
Identities = 30/54 (55%), Positives = 34/54 (62%)
Frame = -3 / -2
Query: 612 MSPIITFPPSFREGIAFRH*ARSLTHSSSVRWCSTSFSTTV*AGGMKLNMSPST 451
MS +TFPP+ R G AF H AR L SSS++ C TS S T *AGG N SP T
Sbjct: 237 MSMTMTFPPASRGGTAFLHCARILMQSSSLQKCRTSLSNTA*AGGTTWNRSPET 76
Score = 61.6 bits (128), Expect(2) = 4e-022
Identities = 32/56 (57%), Positives = 36/56 (64%)
Frame = -3 / -1
Query: 795 G*TSKATRVPNSLRILYSLNPALVKS*RHSFSSCCRPFVMVIMPMSIRS*VSSIGP 628
G*TS R P+ L IL LNPALVK SFSS CRP V+ M +S+R VSSI P
Sbjct: 424 G*TSMTARAPSFLTIL*PLNPALVKISLQSFSSRCRPLVITSMSISMRCWVSSIWP 257
Score = 61.6 bits (128), Expect(2) = 4e-021
Identities = 23/53 (43%), Positives = 32/53 (60%)
Frame = -2 / -3
Query: 793 IDFEGNTSSKFLENLVFAEPCFGEELTPFFFVVLSSFCHGHHADVHQELSFQH 635
ID ++SS+ L+NL+ EPC GE+L P LS+ H H +H+ L FQH
Sbjct: 422 IDINDSSSSQLLDNLIATEPCLGEDLAPVLLFPLSASRHHQHEHIHEVLGFQH 264
Score = 60.2 bits (125), Expect(2) = 4e-021
Identities = 27/57 (47%), Positives = 38/57 (66%)
Frame = -2 / -1
Query: 616 HNVTDYNFPAILP*RNRLPALSQKLDALLIGQVVQHKL*HDSLSRWNETEHVTFDIV 446
HNV D +FP+ + RN L AL + LDA+L+ VQ+KL LSRW++ E VT +I+
Sbjct: 241 HNVYDDDFPSCVTWRNGLLALCEDLDAILVAPEVQNKLEQHGLSRWDDVEQVTRNIL 71
>gb|AL505819.1|AL505819 AL505819 Hordeum vulgare Barke roots Hordeum vulgare subsp. vulgare
cDNA clone HW09J24V 5', mRNA sequence
Length = 500
Score = 79.4 bits (167), Expect(4) = 5e-034
Identities = 29/64 (45%), Positives = 43/64 (67%)
Frame = +2 / +3
Query: 146 SPFEELHGATLFHESMGSLDADFHDMASDALDTHDNFGVEMALREFRDLFEGIQSMTYCC 325
S FE++H A+LF ES +LD + + +D L+ HDN G+ +RE DLF+G++S+T CC
Sbjct: 129 SVFEDVHSASLFDESTAALDPELDALVTDGLEAHDNLGIGTIMRECHDLFKGLESLTDCC 308
Query: 326 GNFG 337
G G
Sbjct: 309 GGDG 320
Score = 51.9 bits (107), Expect(4) = 5e-034
Identities = 19/32 (59%), Positives = 25/32 (78%)
Frame = +2 / +3
Query: 41 EDHMNHTSFVLTCTSSRYIEPAIGLAEWFRKD 136
E+H + TSFVL TS Y+E A+G+AEWF+KD
Sbjct: 15 EEHHSQTSFVLAGTSPHYMEAALGMAEWFKKD 110
Score = 49.6 bits (102), Expect(4) = 2e-022
Identities = 24/60 (40%), Positives = 34/60 (56%)
Frame = -3 / -2
Query: 324 QQ*VMDWIPSNKSLNSRSAISTPKLSWVSKASLAMSWKSASRLPMLSWNRVAPCSSSNGD 145
QQ V D P +S +SR + P+LSW S+ S+ + S S+ +LS A C+SSN D
Sbjct: 307 QQSVRDSSPLKRSWHSRMMVPIPRLSWASRPSVTSASSSGSKAAVLSSKSDALCTSSNTD 128
Score = 41.8 bits (85), Expect(4) = 2e-022
Identities = 19/32 (59%), Positives = 21/32 (65%)
Frame = -3 / -2
Query: 135 SFLNHSASPIAGSM*RDEVQVSTKEVWFMWSS 40
SFLNHSA P A SM* +V ST +VW SS
Sbjct: 109 SFLNHSAIPSAASM*CGDVPASTNDVWLWCSS 14
Score = 41.4 bits (84), Expect(4) = 5e-034
Identities = 16/21 (76%), Positives = 17/21 (80%)
Frame = +2 / +3
Query: 335 GDDKGARAIAKAFPHIKCTVL 397
GD K ARAI KA PH+KCTVL
Sbjct: 312 GDGKTARAITKAHPHVKCTVL 374
Score = 37.3 bits (75), Expect(4) = 2e-022
Identities = 16/26 (61%), Positives = 19/26 (73%)
Frame = -3 / -2
Query: 525 VRWCSTSFSTTV*AGGMKLNMSPST* 448
++WCSTSFS T *A G N SP+T*
Sbjct: 499 LQWCSTSFSITA*AFGTVWNRSPAT* 422
Score = 32.2 bits (64), Expect(4) = 2e-022
Identities = 12/27 (44%), Positives = 14/27 (51%)
Frame = -1 / -3
Query: 416 Q*SWEGPAQCILCVGRPWQWPWHPCHH 336
+* W PA+C G PW WP HH
Sbjct: 393 R*PWGDPARCT*RAGVPW*WPSLSFHH 313
Score = 27.6 bits (54), Expect(4) = 5e-034
Identities = 9/16 (56%), Positives = 12/16 (75%)
Frame = +2 / +3
Query: 443 INYVEGDMFSFIPPAQ 490
+NYV GD+F +P AQ
Sbjct: 417 VNYVAGDLFHTVPKAQ 464
>gb|CD662288.1|CD662288 UCRHV18_01aa10_b1 Drought-stressed Dicktoo barley epidermis cDNA
library Hordeum vulgare subsp. vulgare cDNA clone
UCRHV18_01aa10, mRNA sequence
Length = 792
Score = 90.4 bits (191), Expect(4) = 1e-033
Identities = 38/72 (52%), Positives = 50/72 (69%)
Frame = +2 / -3
Query: 587 GGKVIIGDIMIDHSGPMLETQLLMDIGMMTMTKGRQHDEKEWRQLFTKAGFSEYKILKEF 766
G ++I ++ S MLETQLL+D+ M+ T+GRQ DE +W +FTKAGFS YKI+K+
Sbjct: 505 GKVIVIDIVVGSSSKEMLETQLLVDMLMLVCTRGRQRDENDWSTIFTKAGFSGYKIVKKL 326
Query: 767 GTRVAFEVYP*D 802
G R EVYP*D
Sbjct: 325 GPRGVIEVYP*D 290
Score = 65.2 bits (136), Expect(3) = 2e-021
Identities = 31/55 (56%), Positives = 38/55 (69%)
Frame = -3 / +3
Query: 612 MSPIITFPPSFREGIAFRH*ARSLTHSSSVRWCSTSFSTTV*AGGMKLNMSPST* 448
+S ITFPP R+G+AF H*AR L SSS++ C TS S *AGG+ N SP+T*
Sbjct: 483 ISMTITFPPISRDGMAFLH*ARILMQSSSLQKCRTSLSMRT*AGGIAWNRSPAT* 647
Score = 48.3 bits (99), Expect(3) = 2e-021
Identities = 29/56 (51%), Positives = 33/56 (58%)
Frame = -3 / +3
Query: 801 SHG*TSKATRVPNSLRILYSLNPALVKS*RHSFSSCCRPFVMVIMPMSIRS*VSSI 634
S+G*TS R P+ L IL LNPA VK SFSS RP V M +S S VS+I
Sbjct: 291 SYG*TSMTPRGPSFLTIL*PLNPAFVKIVLQSFSSR*RPLVHTNMSISTNSWVSNI 458
Score = 41.8 bits (85), Expect(4) = 1e-033
Identities = 22/51 (43%), Positives = 29/51 (56%)
Frame = +1 / -2
Query: 448 LCRR*HVQFHSTCSNCRAKACAAPPDR*GVRQASGSMPEGDSFTEGWRESY 600
LCR * + +STCS+ A AC+A + * + Q SGSM EG S + Y
Sbjct: 647 LCRW*PIPCYSTCSSSHA*ACSALLE**RLHQYSGSMQEGHSVPRNGGKGY 495
Score = 41.4 bits (84), Expect(4) = 1e-033
Identities = 18/35 (51%), Positives = 19/35 (54%)
Frame = +2 / -3
Query: 335 GDDKGARAIAKAFPHIKCTVLXXXXXXXXXXXDGV 439
GD ARAI KAFPHIKC VL DG+
Sbjct: 757 GDGTTARAIVKAFPHIKCNVLDLPKVIEKVPSDGI 653
Score = 26.7 bits (52), Expect(3) = 2e-021
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = -1 / +1
Query: 404 EGPAQCILCVGRPWQWPWHPCHH 336
EGP GRP QWP HH
Sbjct: 688 EGPTHYT*YAGRP*QWP*LSFHH 756
Score = 25.8 bits (50), Expect(4) = 1e-033
Identities = 8/14 (57%), Positives = 11/14 (78%)
Frame = +2 / -3
Query: 296 EGIQSMTYCCGNFG 337
+G+QS+T CCG G
Sbjct: 790 KGVQSLTDCCGGDG 749
>gb|CD663812.1|CD663812 UCRHV18_06ch08_b1 Drought-stressed Dicktoo barley epidermis cDNA
library Hordeum vulgare subsp. vulgare cDNA clone
UCRHV18_06ch08, mRNA sequence
Length = 791
Score = 90.4 bits (191), Expect(4) = 1e-033
Identities = 38/72 (52%), Positives = 50/72 (69%)
Frame = +2 / -3
Query: 587 GGKVIIGDIMIDHSGPMLETQLLMDIGMMTMTKGRQHDEKEWRQLFTKAGFSEYKILKEF 766
G ++I ++ S MLETQLL+D+ M+ T+GRQ DE +W +FTKAGFS YKI+K+
Sbjct: 504 GKVIVIDIVVGSSSKEMLETQLLVDMLMLVCTRGRQRDENDWSTIFTKAGFSGYKIVKKL 325
Query: 767 GTRVAFEVYP*D 802
G R EVYP*D
Sbjct: 324 GPRGVIEVYP*D 289
Score = 65.2 bits (136), Expect(3) = 2e-021
Identities = 31/55 (56%), Positives = 38/55 (69%)
Frame = -3 / +2
Query: 612 MSPIITFPPSFREGIAFRH*ARSLTHSSSVRWCSTSFSTTV*AGGMKLNMSPST* 448
+S ITFPP R+G+AF H*AR L SSS++ C TS S *AGG+ N SP+T*
Sbjct: 482 ISMTITFPPISRDGMAFLH*ARILMQSSSLQKCRTSLSMRT*AGGIAWNRSPAT* 646
Score = 48.3 bits (99), Expect(3) = 2e-021
Identities = 29/56 (51%), Positives = 33/56 (58%)
Frame = -3 / +2
Query: 801 SHG*TSKATRVPNSLRILYSLNPALVKS*RHSFSSCCRPFVMVIMPMSIRS*VSSI 634
S+G*TS R P+ L IL LNPA VK SFSS RP V M +S S VS+I
Sbjct: 290 SYG*TSMTPRGPSFLTIL*PLNPAFVKIVLQSFSSR*RPLVHTNMSISTNSWVSNI 457
Score = 41.8 bits (85), Expect(4) = 1e-033
Identities = 22/51 (43%), Positives = 29/51 (56%)
Frame = +1 / -2
Query: 448 LCRR*HVQFHSTCSNCRAKACAAPPDR*GVRQASGSMPEGDSFTEGWRESY 600
LCR * + +STCS+ A AC+A + * + Q SGSM EG S + Y
Sbjct: 646 LCRW*PIPCYSTCSSSHA*ACSALLE**RLHQYSGSMQEGHSVPRNGGKGY 494
Score = 41.4 bits (84), Expect(4) = 1e-033
Identities = 18/35 (51%), Positives = 19/35 (54%)
Frame = +2 / -3
Query: 335 GDDKGARAIAKAFPHIKCTVLXXXXXXXXXXXDGV 439
GD ARAI KAFPHIKC VL DG+
Sbjct: 756 GDGTTARAIVKAFPHIKCNVLDLPKVIEKVPSDGI 652
Score = 26.7 bits (52), Expect(3) = 2e-021
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = -1 / +3
Query: 404 EGPAQCILCVGRPWQWPWHPCHH 336
EGP GRP QWP HH
Sbjct: 687 EGPTHYT*YAGRP*QWP*LSFHH 755
Score = 25.8 bits (50), Expect(4) = 1e-033
Identities = 8/14 (57%), Positives = 11/14 (78%)
Frame = +2 / -3
Query: 296 EGIQSMTYCCGNFG 337
+G+QS+T CCG G
Sbjct: 789 KGVQSLTDCCGGDG 748
>gb|AV918926.1|AV918926 AV918926 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags22l17 3', mRNA sequence
Length = 655
Score = 78.5 bits (165), Expect(3) = 7e-033
Identities = 32/57 (56%), Positives = 38/57 (66%)
Frame = +2 / -1
Query: 635 MLETQLLMDIGMMTMTKGRQHDEKEWRQLFTKAGFSEYKILKEFGTRVAFEVYP*DI 805
M E Q LMDI M+ T+GRQ E +W LFTKAGFS+YKI+K G R EVY * +
Sbjct: 373 MFEAQTLMDILMLVFTRGRQRSESDWHVLFTKAGFSDYKIVKRLGARGVIEVYK*TV 203
Score = 77.1 bits (162), Expect(3) = 7e-033
Identities = 29/62 (46%), Positives = 43/62 (69%)
Frame = +2 / -1
Query: 443 INYVEGDMFSFIPPAQTXXXXXXXXXXTDEECVKLLAQCRKAIPSRKDGGKVIIGDIMID 622
+NYV GD+F +P AQ +D++CVK+L QC+ AIPSR++GGKVI+ DI+++
Sbjct: 571 VNYVGGDLFHTVPKAQAVMLKLVLHHWSDDDCVKILTQCKNAIPSREEGGKVIVIDIVVE 392
Query: 623 HS 628
S
Sbjct: 391 PS 386
Score = 72.5 bits (152), Expect(3) = 2e-024
Identities = 34/58 (58%), Positives = 38/58 (65%)
Frame = -3 / +3
Query: 621 SIIMSPIITFPPSFREGIAFRH*ARSLTHSSSVRWCSTSFSTTV*AGGMKLNMSPST* 448
S MS ITFPPS REG+AF H R T SSS++WC+TS S T *A G N SP T*
Sbjct: 393 STTMSMTITFPPSSREGMAFLHWVRIFTQSSSLQWCNTSLSITA*AFGTVWNRSPPT* 566
Score = 48.7 bits (100), Expect(3) = 2e-024
Identities = 19/55 (34%), Positives = 29/55 (52%)
Frame = -2 / +2
Query: 799 SRIDFEGNTSSKFLENLVFAEPCFGEELTPFFFVVLSSFCHGHHADVHQELSFQH 635
S +D + + ++ +N + AEPCFGE P F L++ H VHQ L +H
Sbjct: 209 SLVDLDNTSCTQSFDNFIIAEPCFGE*HMPVTFTTLTASREDKHEYVHQSLRLKH 373
Score = 29.5 bits (58), Expect(3) = 2e-024
Identities = 11/20 (55%), Positives = 15/20 (75%)
Frame = -3 / +3
Query: 435 PSAGLAAMILGGASTVHFMC 376
PSA + ++ LG +STVH MC
Sbjct: 576 PSAEVLSITLGRSSTVHLMC 635
Score = 23.5 bits (45), Expect(3) = 7e-033
Identities = 9/21 (42%), Positives = 10/21 (47%)
Frame = +2 / -1
Query: 377 HIKCTVLXXXXXXXXXXXDGV 439
HIKCTVL DG+
Sbjct: 634 HIKCTVLDLPKVIDKTSADGI 572
>gb|BJ463887.1|BJ463887 BJ463887 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags30o16 5', mRNA sequence
Length = 706
Score = 77.6 bits (163), Expect(3) = 2e-032
Identities = 29/64 (45%), Positives = 42/64 (65%)
Frame = +2 / +1
Query: 146 SPFEELHGATLFHESMGSLDADFHDMASDALDTHDNFGVEMALREFRDLFEGIQSMTYCC 325
S FE++H A+LF ES +LD + + +D L HDN G+ +RE DLF+G++S+T CC
Sbjct: 406 SVFEDVHSASLFDESTAALDPELDALVTDGLAAHDNLGIGTIIRECHDLFKGLESLTDCC 585
Query: 326 GNFG 337
G G
Sbjct: 586 GGDG 597
Score = 58.3 bits (121), Expect(3) = 2e-032
Identities = 21/43 (48%), Positives = 33/43 (76%)
Frame = +2 / +1
Query: 8 VSYLLVEGIPHEDHMNHTSFVLTCTSSRYIEPAIGLAEWFRKD 136
+S +LV+G+ ++H + TSFVL TS Y+E A+G+A+WF+KD
Sbjct: 259 LSRILVDGVVADEHHSQTSFVLAGTSRHYMEAALGMADWFKKD 387
Score = 41.8 bits (85), Expect(3) = 2e-032
Identities = 18/35 (51%), Positives = 19/35 (54%)
Frame = +2 / +1
Query: 335 GDDKGARAIAKAFPHIKCTVLXXXXXXXXXXXDGV 439
GD ARAI KA PHIKCTVL DG+
Sbjct: 589 GDGTTARAITKAHPHIKCTVLDLPKVIDKTSADGI 693
>gb|BF256054.2|BF256054 HVSMEf0008J16f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEf0008J16f, mRNA sequence
Length = 447
Score = 75.3 bits (158), Expect(4) = 2e-032
Identities = 31/62 (50%), Positives = 41/62 (66%)
Frame = +2 / +3
Query: 443 INYVEGDMFSFIPPAQTXXXXXXXXXXTDEECVKLLAQCRKAIPSRKDGGKVIIGDIMID 622
+NYV GD+F PPAQ +DE+C+ +LAQC+KAIPSR+ GGKVII +I +
Sbjct: 168 VNYVAGDLFHTFPPAQAVMLKLVLHFWSDEDCINILAQCKKAIPSREMGGKVIIINIGLG 347
Query: 623 HS 628
S
Sbjct: 348 SS 353
Score = 41.8 bits (85), Expect(4) = 2e-032
Identities = 19/35 (54%), Positives = 19/35 (54%)
Frame = +2 / +3
Query: 335 GDDKGARAIAKAFPHIKCTVLXXXXXXXXXXXDGV 439
GD ARAI KAFPHIKC VL DGV
Sbjct: 63 GDGTTARAIVKAFPHIKCNVLDLPKVIDKVPSDGV 167
Score = 40.0 bits (81), Expect(4) = 2e-032
Identities = 15/24 (62%), Positives = 19/24 (79%)
Frame = +2 / +3
Query: 641 ETQLLMDIGMMTMTKGRQHDEKEW 712
ET+LLMD+ M T+GRQ +EKEW
Sbjct: 369 ETELLMDMLMFICTRGRQRNEKEW 440
Score = 37.7 bits (76), Expect(4) = 2e-032
Identities = 14/22 (63%), Positives = 17/22 (77%)
Frame = +2 / +3
Query: 272 LREFRDLFEGIQSMTYCCGNFG 337
LRE R LF+G+QS+T CCG G
Sbjct: 6 LRECRGLFDGLQSLTDCCGGDG 71
>gb|BF255884.2|BF255884 HVSMEf0008B14f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEf0008B14f, mRNA sequence
Length = 449
Score = 76.7 bits (161), Expect(3) = 2e-032
Identities = 29/64 (45%), Positives = 43/64 (67%)
Frame = +2 / +2
Query: 146 SPFEELHGATLFHESMGSLDADFHDMASDALDTHDNFGVEMALREFRDLFEGIQSMTYCC 325
SPF+++HGA +F ESM LD + + DA+ HD+ G+ LR+ R+LFEG++S+T C
Sbjct: 2 SPFQDVHGAAIFEESMALLDPEMDQLIHDAVVAHDHVGIGPVLRQCRELFEGLESLTDCG 181
Query: 326 GNFG 337
G G
Sbjct: 182 GGDG 193
Score = 65.2 bits (136), Expect(3) = 2e-032
Identities = 23/50 (46%), Positives = 32/50 (64%)
Frame = +2 / +2
Query: 443 INYVEGDMFSFIPPAQTXXXXXXXXXXTDEECVKLLAQCRKAIPSRKDGG 592
+ YV GD+F +PPAQ +DE+C+K+LAQC+KA+P R GG
Sbjct: 299 VKYVSGDLFHVVPPAQAVLLKLVLHFWSDEDCIKILAQCKKAVPPRDAGG 448
Score = 35.4 bits (71), Expect(3) = 2e-032
Identities = 13/21 (61%), Positives = 16/21 (76%)
Frame = +2 / +2
Query: 335 GDDKGARAIAKAFPHIKCTVL 397
GD AR+I +A+PHI CTVL
Sbjct: 185 GDGTTARSIVEAYPHINCTVL 247
>gb|BF256832.2|BF256832 HVSMEf0011C05f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEf0011C05f, mRNA sequence
Length = 592
Score = 74.8 bits (157), Expect(4) = 5e-032
Identities = 31/64 (48%), Positives = 40/64 (62%)
Frame = +2 / +3
Query: 146 SPFEELHGATLFHESMGSLDADFHDMASDALDTHDNFGVEMALREFRDLFEGIQSMTYCC 325
SPFE +H A F ESM LD + + +AL HD+ G+ LRE R LF+G+QS+T CC
Sbjct: 189 SPFEHVHAAAPFDESMTLLDPETDKLFYEALAAHDHMGIGTVLRECRGLFDGLQSLTDCC 368
Query: 326 GNFG 337
G G
Sbjct: 369 GGDG 380
Score = 48.3 bits (99), Expect(4) = 5e-032
Identities = 17/43 (39%), Positives = 28/43 (65%)
Frame = +2 / +3
Query: 8 VSYLLVEGIPHEDHMNHTSFVLTCTSSRYIEPAIGLAEWFRKD 136
+SY+LV+G+ + H +F L TS ++E +GLA+WF+ D
Sbjct: 42 LSYILVDGVLIDGEARHVTFPLAVTSRYHMESGLGLADWFKND 170
Score = 41.8 bits (85), Expect(4) = 5e-032
Identities = 19/35 (54%), Positives = 19/35 (54%)
Frame = +2 / +3
Query: 335 GDDKGARAIAKAFPHIKCTVLXXXXXXXXXXXDGV 439
GD ARAI KAFPHIKC VL DGV
Sbjct: 372 GDGTTARAIVKAFPHIKCNVLDLPKVIDKVPSDGV 476
Score = 28.6 bits (56), Expect(4) = 5e-032
Identities = 9/16 (56%), Positives = 12/16 (75%)
Frame = +2 / +3
Query: 443 INYVEGDMFSFIPPAQ 490
+NYV GD+ +PPAQ
Sbjct: 477 VNYVAGDLLHTVPPAQ 524
>gb|BF253847.2|BF253847 HVSMEf0002E15f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEf0002E15f, mRNA sequence
Length = 822
Score = 73.9 bits (155), Expect(3) = 8e-032
Identities = 28/59 (47%), Positives = 40/59 (67%)
Frame = +2 / +1
Query: 443 INYVEGDMFSFIPPAQTXXXXXXXXXXTDEECVKLLAQCRKAIPSRKDGGKVIIGDIMI 619
+NYV GD+F +P +Q +DE+CVK+L QC+KAIP+ +GGK+II DI+I
Sbjct: 268 VNYVAGDLFHTVPSSQAVMLKLVLHFWSDEDCVKILTQCKKAIPAHDEGGKIIIIDIVI 444
Score = 59.7 bits (124), Expect(3) = 8e-032
Identities = 23/55 (41%), Positives = 34/55 (61%)
Frame = +2 / +1
Query: 173 TLFHESMGSLDADFHDMASDALDTHDNFGVEMALREFRDLFEGIQSMTYCCGNFG 337
T F E +D +F +A++ L HDN G+ LRE D+F+G++S+T CCG G
Sbjct: 7 TPFDERTPLMDEEFDAVANEGLAAHDNLGIATILRECGDIFKGLESLTDCCGGDG 171
Score = 59.3 bits (123), Expect(4) = 7e-024
Identities = 30/57 (52%), Positives = 35/57 (61%)
Frame = -3 / -2
Query: 618 IIMSPIITFPPSFREGIAFRH*ARSLTHSSSVRWCSTSFSTTV*AGGMKLNMSPST* 448
I MS II FPPS G+AF H + T SSS++ CSTS S T * G N SP+T*
Sbjct: 443 ITMSMIIIFPPSSCAGMAFLHWVKIFTQSSSLQKCSTSLSMTA*EDGTVWNRSPAT* 273
Score = 41.8 bits (85), Expect(3) = 8e-032
Identities = 18/35 (51%), Positives = 20/35 (57%)
Frame = +2 / +1
Query: 335 GDDKGARAIAKAFPHIKCTVLXXXXXXXXXXXDGV 439
GD ARA+ KA+PHIKCTVL DGV
Sbjct: 163 GDGTTARALVKAYPHIKCTVLDLPKVIDKAPKDGV 267
Score = 40.0 bits (81), Expect(4) = 7e-024
Identities = 20/47 (42%), Positives = 28/47 (59%)
Frame = -3 / -2
Query: 324 QQ*VMDWIPSNKSLNSRSAISTPKLSWVSKASLAMSWKSASRLPMLS 184
QQ V D P S +SR+ ++ PKLSW + SLA + S+S +LS
Sbjct: 158 QQSVRDSSPLKMSPHSRNMVAIPKLSWAANPSLATASNSSSMRGVLS 18
Score = 35.0 bits (70), Expect(4) = 7e-024
Identities = 17/46 (36%), Positives = 21/46 (45%)
Frame = -2 / -1
Query: 772 SSKFLENLVFAEPCFGEELTPFFFVVLSSFCHGHHADVHQELSFQH 635
S +F +L PC L F+ L FC HH +HQ L F H
Sbjct: 603 SFQFPPHLTVIGPCCHLMLVSVIFIPLYPFCCLHH*HIHQ*LGFLH 466
Score = 31.3 bits (62), Expect(4) = 7e-024
Identities = 11/22 (50%), Positives = 15/22 (68%)
Frame = -3 / -2
Query: 438 TPSAGLAAMILGGASTVHFMCG 373
TPS G ++ G ++TVH MCG
Sbjct: 266 TPSFGALSITFGRSNTVHLMCG 201
>gb|AV913405.1|AV913405 AV913405 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags21p04 5', mRNA sequence
Length = 571
Score = 77.6 bits (163), Expect(3) = 1e-031
Identities = 29/64 (45%), Positives = 42/64 (65%)
Frame = +2 / +1
Query: 146 SPFEELHGATLFHESMGSLDADFHDMASDALDTHDNFGVEMALREFRDLFEGIQSMTYCC 325
S FE++H A+LF ES +LD + + +D L HDN G+ +RE DLF+G++S+T CC
Sbjct: 319 SVFEDVHSASLFDESTAALDPELDALVTDGLAAHDNLGIGTIIRECHDLFKGLESLTDCC 498
Query: 326 GNFG 337
G G
Sbjct: 499 GGDG 510
Score = 58.3 bits (121), Expect(3) = 1e-031
Identities = 21/43 (48%), Positives = 33/43 (76%)
Frame = +2 / +1
Query: 8 VSYLLVEGIPHEDHMNHTSFVLTCTSSRYIEPAIGLAEWFRKD 136
+S +LV+G+ ++H + TSFVL TS Y+E A+G+A+WF+KD
Sbjct: 172 LSRILVDGVVADEHHSQTSFVLAGTSRHYMEAALGMADWFKKD 300
Score = 39.1 bits (79), Expect(3) = 1e-031
Identities = 16/21 (76%), Positives = 16/21 (76%)
Frame = +2 / +1
Query: 335 GDDKGARAIAKAFPHIKCTVL 397
GD ARAI KA PHIKCTVL
Sbjct: 502 GDGTTARAITKAHPHIKCTVL 564
>gb|AV918703.1|AV918703 AV918703 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags21p04 3', mRNA sequence
Length = 654
Score = 78.5 bits (165), Expect(2) = 3e-031
Identities = 32/57 (56%), Positives = 38/57 (66%)
Frame = +2 / -2
Query: 635 MLETQLLMDIGMMTMTKGRQHDEKEWRQLFTKAGFSEYKILKEFGTRVAFEVYP*DI 805
M E Q LMDI M+ T+GRQ E +W LFTKAGFS+YKI+K G R EVY * +
Sbjct: 371 MFEAQTLMDILMLVFTRGRQRSESDWHVLFTKAGFSDYKIVKRLGARGVIEVYK*TV 201
Score = 77.1 bits (162), Expect(2) = 3e-031
Identities = 29/62 (46%), Positives = 43/62 (69%)
Frame = +2 / -2
Query: 443 INYVEGDMFSFIPPAQTXXXXXXXXXXTDEECVKLLAQCRKAIPSRKDGGKVIIGDIMID 622
+NYV GD+F +P AQ +D++CVK+L QC+ AIPSR++GGKVI+ DI+++
Sbjct: 569 VNYVGGDLFHTVPKAQAVMLKLVLHHWSDDDCVKILTQCKNAIPSREEGGKVIVIDIVVE 390
Query: 623 HS 628
S
Sbjct: 389 PS 384
Score = 72.5 bits (152), Expect(3) = 2e-023
Identities = 34/58 (58%), Positives = 38/58 (65%)
Frame = -3 / +1
Query: 621 SIIMSPIITFPPSFREGIAFRH*ARSLTHSSSVRWCSTSFSTTV*AGGMKLNMSPST* 448
S MS ITFPPS REG+AF H R T SSS++WC+TS S T *A G N SP T*
Sbjct: 391 STTMSMTITFPPSSREGMAFLHWVRIFTQSSSLQWCNTSLSITA*AFGTVWNRSPPT* 564
Score = 48.7 bits (100), Expect(3) = 2e-023
Identities = 19/55 (34%), Positives = 29/55 (52%)
Frame = -2 / +3
Query: 799 SRIDFEGNTSSKFLENLVFAEPCFGEELTPFFFVVLSSFCHGHHADVHQELSFQH 635
S +D + + ++ +N + AEPCFGE P F L++ H VHQ L +H
Sbjct: 207 SLVDLDNTSCTQSFDNFIIAEPCFGE*HMPVTFTTLTASREDKHEYVHQSLRLKH 371
Score = 25.8 bits (50), Expect(3) = 2e-023
Identities = 10/18 (55%), Positives = 14/18 (77%)
Frame = -3 / +1
Query: 435 PSAGLAAMILGGASTVHF 382
PSA + ++ LG +STVHF
Sbjct: 574 PSAEVLSITLGRSSTVHF 627
>gb|AV918077.1|AV918077 AV918077 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags17l08 3', mRNA sequence
Length = 640
Score = 78.5 bits (165), Expect(2) = 3e-031
Identities = 32/57 (56%), Positives = 38/57 (66%)
Frame = +2 / -1
Query: 635 MLETQLLMDIGMMTMTKGRQHDEKEWRQLFTKAGFSEYKILKEFGTRVAFEVYP*DI 805
M E Q LMDI M+ T+GRQ E +W LFTKAGFS+YKI+K G R EVY * +
Sbjct: 370 MFEAQTLMDILMLVFTRGRQRSESDWHVLFTKAGFSDYKIVKRLGARGVIEVYK*TV 200
Score = 77.1 bits (162), Expect(2) = 3e-031
Identities = 29/62 (46%), Positives = 43/62 (69%)
Frame = +2 / -1
Query: 443 INYVEGDMFSFIPPAQTXXXXXXXXXXTDEECVKLLAQCRKAIPSRKDGGKVIIGDIMID 622
+NYV GD+F +P AQ +D++CVK+L QC+ AIPSR++GGKVI+ DI+++
Sbjct: 568 VNYVGGDLFHTVPKAQAVMLKLVLHHWSDDDCVKILTQCKNAIPSREEGGKVIVIDIVVE 389
Query: 623 HS 628
S
Sbjct: 388 PS 383
Score = 72.5 bits (152), Expect(3) = 2e-023
Identities = 34/58 (58%), Positives = 38/58 (65%)
Frame = -3 / +3
Query: 621 SIIMSPIITFPPSFREGIAFRH*ARSLTHSSSVRWCSTSFSTTV*AGGMKLNMSPST* 448
S MS ITFPPS REG+AF H R T SSS++WC+TS S T *A G N SP T*
Sbjct: 390 STTMSMTITFPPSSREGMAFLHWVRIFTQSSSLQWCNTSLSITA*AFGTVWNRSPPT* 563
Score = 48.7 bits (100), Expect(3) = 2e-023
Identities = 19/55 (34%), Positives = 29/55 (52%)
Frame = -2 / +2
Query: 799 SRIDFEGNTSSKFLENLVFAEPCFGEELTPFFFVVLSSFCHGHHADVHQELSFQH 635
S +D + + ++ +N + AEPCFGE P F L++ H VHQ L +H
Sbjct: 206 SLVDLDNTSCTQSFDNFIIAEPCFGE*HMPVTFTTLTASREDKHEYVHQSLRLKH 370
Score = 25.8 bits (50), Expect(3) = 2e-023
Identities = 10/18 (55%), Positives = 14/18 (77%)
Frame = -3 / +3
Query: 435 PSAGLAAMILGGASTVHF 382
PSA + ++ LG +STVHF
Sbjct: 573 PSAEVLSITLGRSSTVHF 626
>gb|AV920613.1|AV920613 AV920613 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags14n24 3', mRNA sequence
Length = 649
Score = 77.6 bits (163), Expect(2) = 6e-031
Identities = 29/62 (46%), Positives = 43/62 (69%)
Frame = +2 / -3
Query: 443 INYVEGDMFSFIPPAQTXXXXXXXXXXTDEECVKLLAQCRKAIPSRKDGGKVIIGDIMID 622
+NYV GD+F +P AQ +D++CVK+L QC+ AIPSR++GGKVI+ DI+++
Sbjct: 605 VNYVAGDLFHTVPKAQAVMLKLVLHHWSDDDCVKILTQCKNAIPSREEGGKVIVIDIVVE 426
Query: 623 HS 628
S
Sbjct: 425 PS 420
Score = 77.1 bits (162), Expect(2) = 6e-031
Identities = 30/57 (52%), Positives = 39/57 (68%)
Frame = +2 / -3
Query: 635 MLETQLLMDIGMMTMTKGRQHDEKEWRQLFTKAGFSEYKILKEFGTRVAFEVYP*DI 805
M E Q LMD+ M+ T+GRQ E +WR LF KAGF++YKI+K+ G R EVY * +
Sbjct: 407 MFEAQTLMDMLMLVFTRGRQRSENDWRDLFMKAGFTDYKIIKKMGARGVIEVYK*SL 237
Score = 73.0 bits (153), Expect(2) = 2e-022
Identities = 34/58 (58%), Positives = 39/58 (67%)
Frame = -3 / +1
Query: 621 SIIMSPIITFPPSFREGIAFRH*ARSLTHSSSVRWCSTSFSTTV*AGGMKLNMSPST* 448
S +S ITFPPS REG+AF H R T SSS++WCSTS S T *A G N SP+T*
Sbjct: 427 STTISMTITFPPSSREGMAFLHWVRIFTQSSSLQWCSTSLSITA*AFGTVWNRSPAT* 600
Score = 52.8 bits (109), Expect(2) = 2e-022
Identities = 19/53 (35%), Positives = 30/53 (56%)
Frame = -2 / +3
Query: 793 IDFEGNTSSKFLENLVFAEPCFGEELTPFFFVVLSSFCHGHHADVHQELSFQH 635
+D + + + FL+N V EPCF EE++P F L++ H VH+ L +H
Sbjct: 249 VDLDDTSCTHFLDNFVVGEPCFHEEVSPVIFATLTAPREHKHEHVHESLGLKH 407
>gb|AV929534.1|AV929534 AV929534 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp.
vulgare cDNA clone basd14j15 3', mRNA sequence
Length = 625
Score = 77.6 bits (163), Expect(2) = 6e-031
Identities = 29/62 (46%), Positives = 43/62 (69%)
Frame = +2 / -1
Query: 443 INYVEGDMFSFIPPAQTXXXXXXXXXXTDEECVKLLAQCRKAIPSRKDGGKVIIGDIMID 622
+NYV GD+F +P AQ +D++CVK+L QC+ AIPSR++GGKVI+ DI+++
Sbjct: 571 VNYVAGDLFHTVPKAQAVMLKLVLHHWSDDDCVKILTQCKNAIPSREEGGKVIVIDIVVE 392
Query: 623 HS 628
S
Sbjct: 391 PS 386
Score = 77.1 bits (162), Expect(2) = 6e-031
Identities = 30/57 (52%), Positives = 39/57 (68%)
Frame = +2 / -1
Query: 635 MLETQLLMDIGMMTMTKGRQHDEKEWRQLFTKAGFSEYKILKEFGTRVAFEVYP*DI 805
M E Q LMD+ M+ T+GRQ E +WR LF KAGF++YKI+K+ G R EVY * +
Sbjct: 373 MFEAQTLMDMLMLVFTRGRQRSENDWRDLFMKAGFTDYKIIKKMGARGVIEVYK*SL 203
Score = 73.0 bits (153), Expect(2) = 2e-022
Identities = 34/58 (58%), Positives = 39/58 (67%)
Frame = -3 / +3
Query: 621 SIIMSPIITFPPSFREGIAFRH*ARSLTHSSSVRWCSTSFSTTV*AGGMKLNMSPST* 448
S +S ITFPPS REG+AF H R T SSS++WCSTS S T *A G N SP+T*
Sbjct: 393 STTISMTITFPPSSREGMAFLHWVRIFTQSSSLQWCSTSLSITA*AFGTVWNRSPAT* 566
Score = 52.8 bits (109), Expect(2) = 2e-022
Identities = 19/53 (35%), Positives = 30/53 (56%)
Frame = -2 / +2
Query: 793 IDFEGNTSSKFLENLVFAEPCFGEELTPFFFVVLSSFCHGHHADVHQELSFQH 635
+D + + + FL+N V EPCF EE++P F L++ H VH+ L +H
Sbjct: 215 VDLDDTSCTHFLDNFVVGEPCFHEEVSPVIFATLTAPREHKHEHVHESLGLKH 373
>gb|BF620538.3|BF620538 HVSMEc0020C24f Hordeum vulgare seedling shoot EST library
HVcDNA0003 (Etiolated and unstressed) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEc0020C24f, mRNA sequence
Length = 673
Score = 84.0 bits (177), Expect(3) = 4e-030
Identities = 33/64 (51%), Positives = 44/64 (68%)
Frame = +2 / +2
Query: 146 SPFEELHGATLFHESMGSLDADFHDMASDALDTHDNFGVEMALREFRDLFEGIQSMTYCC 325
SPFE++HGATL ESM LD + ++ +AL HD+ G+ LRE DLF+G+QS+T CC
Sbjct: 437 SPFEDVHGATLCEESMALLDPESDELFHEALAAHDHLGIGTILRECHDLFKGVQSLTDCC 616
Query: 326 GNFG 337
G G
Sbjct: 617 GGDG 628
Score = 49.6 bits (102), Expect(3) = 4e-030
Identities = 20/48 (41%), Positives = 31/48 (64%)
Frame = +2 / +2
Query: 8 VSYLLVEGIPHEDHMNHTSFVLTCTSSRYIEPAIGLAEWFRKDTATSP 151
+SYLLV+G+ + + + +L+ TS IE A+GLA+WF+KD P
Sbjct: 293 LSYLLVDGVFIDGEASQKALLLSTTSRYNIEAALGLADWFKKDITPPP 436
Score = 36.3 bits (73), Expect(3) = 4e-030
Identities = 14/18 (77%), Positives = 14/18 (77%)
Frame = +2 / +2
Query: 335 GDDKGARAIAKAFPHIKC 388
GD ARAI KAFPHIKC
Sbjct: 620 GDGTTARAIVKAFPHIKC 673
Database: Hordeum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:16 PM
Number of letters in database: 175,134,539
Number of sequences in database: 312,970
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 567,376,860
Number of Sequences: 312970
Number of extensions: 10467236
Number of successful extensions: 103367
Number of sequences better than 1.0e-020: 161
length of database: 58,378,179
effective HSP length: 53
effective length of database: 41,790,769
effective search space used: 13080510697
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)