TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 131572.2.3
(1521 letters)
Database: Hordeum_nucl_with_EST.fasta
312,970 sequences; 175,134,539 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BF620538.3|BF620538 HVSMEc0020C24f Hordeum vulgare seedl... 109 4e-063
gb|BM817346.1|BM817346 HC111F01_T3.ab1 HC Hordeum vulgare s... 89 5e-063
gb|AL503330.1|AL503330 AL503330 Hordeum vulgare Barke roots... 83 5e-062
gb|AV925342.1|AV925342 AV925342 K. Sato unpublished cDNA li... 110 1e-060
gb|AV926997.1|AV926997 AV926997 K. Sato unpublished cDNA li... 108 4e-060
gb|BF260521.2|BF260521 HVSMEf0022D17f Hordeum vulgare seedl... 99 8e-060
gb|BF256773.2|BF256773 HVSMEf0010P15f Hordeum vulgare seedl... 99 2e-058
gb|BF259028.2|BF259028 HVSMEf0017H05f Hordeum vulgare seedl... 99 7e-057
gb|BF631324.2|BF631324 HVSMEb0015J20f Hordeum vulgare seedl... 99 6e-055
gb|AV925298.1|AV925298 AV925298 K. Sato unpublished cDNA li... 109 6e-055
gb|BF260650.2|BF260650 HVSMEf0022J06f Hordeum vulgare seedl... 109 1e-054
gb|BF260951.2|BF260951 HVSMEf0023F23f Hordeum vulgare seedl... 117 3e-054
gb|AV913354.1|AV913354 AV913354 K. Sato unpublished cDNA li... 110 7e-054
gb|BF620185.2|BF620185 HVSMEc0018M19f Hordeum vulgare seedl... 112 7e-054
gb|BJ463887.1|BJ463887 BJ463887 K. Sato unpublished cDNA li... 79 1e-053
gb|BG309181.2|BG309181 HVSMEc0004K06f Hordeum vulgare seedl... 110 2e-053
gb|BF260804.2|BF260804 HVSMEf0022P20f Hordeum vulgare seedl... 112 2e-053
gb|AV922821.1|AV922821 AV922821 K. Sato unpublished cDNA li... 108 2e-053
gb|AV926805.1|AV926805 AV926805 K. Sato unpublished cDNA li... 110 5e-053
gb|BF259024.3|BF259024 HVSMEf0017H01f Hordeum vulgare seedl... 127 2e-052
gb|AL504052.1|AL504052 AL504052 Hordeum vulgare Barke roots... 108 3e-052
gb|BJ462654.1|BJ462654 BJ462654 K. Sato unpublished cDNA li... 85 1e-051
gb|BF256951.3|BF256951 HVSMEf0011H09f Hordeum vulgare seedl... 100 3e-051
gb|AL503735.1|AL503735 AL503735 Hordeum vulgare Barke roots... 79 3e-051
gb|BF260366.2|BF260366 HVSMEf0021M22f Hordeum vulgare seedl... 112 2e-050
gb|AL504343.1|AL504343 AL504343 Hordeum vulgare Barke roots... 99 2e-050
gb|AV925371.1|AV925371 AV925371 K. Sato unpublished cDNA li... 90 5e-050
gb|BI778179.2|BI778179 EBro07_SQ002_H05_R root, 3 week, red... 79 2e-049
gb|BF617976.2|BF617976 HVSMEc0002N19f Hordeum vulgare seedl... 112 3e-049
gb|CB879142.1|CB879142 HP11B09T HP Hordeum vulgare subsp. v... 90 7e-049
gb|BI956453.1|BI956453 HVSMEn0003H10f Hordeum vulgare rachi... 80 7e-049
gb|AV918653.1|AV918653 AV918653 K. Sato unpublished cDNA li... 90 2e-048
gb|BF260928.2|BF260928 HVSMEf0023E24f Hordeum vulgare seedl... 82 4e-048
gb|BF260349.2|BF260349 HVSMEf0021M05f Hordeum vulgare seedl... 127 1e-047
gb|CB882435.1|CB882435 HL01N17w HL Hordeum vulgare subsp. v... 127 2e-047
gb|CD662493.1|CD662493 UCRHV18_01ch06_b1 Drought-stressed D... 97 3e-047
gb|AV925163.1|AV925163 AV925163 K. Sato unpublished cDNA li... 110 3e-047
gb|BF258405.3|BF258405 HVSMEf0015K05f Hordeum vulgare seedl... 99 4e-047
gb|AV923580.1|AV923580 AV923580 K. Sato unpublished cDNA li... 108 1e-046
gb|BQ765268.1|BQ765268 EBro03_SQ006_N17_R root, 3 week, wat... 84 5e-046
gb|AV914623.1|AV914623 AV914623 K. Sato unpublished cDNA li... 110 1e-045
gb|BF257368.2|BF257368 HVSMEf0012L06f Hordeum vulgare seedl... 127 2e-045
gb|AL504415.1|AL504415 AL504415 Hordeum vulgare Barke roots... 80 8e-045
gb|BF628372.2|BF628372 HVSMEb0003N17f Hordeum vulgare seedl... 109 2e-044
gb|AV919708.1|AV919708 AV919708 K. Sato unpublished cDNA li... 90 3e-044
gb|AV918157.1|AV918157 AV918157 K. Sato unpublished cDNA li... 79 1e-043
gb|CB876850.1|CB876850 HP02J21T HP Hordeum vulgare subsp. v... 107 2e-043
gb|BF628014.2|BF628014 HVSMEb0002J23f Hordeum vulgare seedl... 102 2e-043
gb|BJ468335.1|BJ468335 BJ468335 K. Sato unpublished cDNA li... 79 8e-043
gb|BF261193.2|BF261193 HVSMEf0011F03f Hordeum vulgare seedl... 108 1e-042
gb|BJ463550.1|BJ463550 BJ463550 K. Sato unpublished cDNA li... 85 3e-042
gb|BF258585.2|BF258585 HVSMEf0016C04f Hordeum vulgare seedl... 89 5e-042
gb|BF259091.3|BF259091 HVSMEf0017K20f Hordeum vulgare seedl... 108 6e-042
gb|BF259348.2|BF259348 HVSMEf0019F16f Hordeum vulgare seedl... 81 9e-042
gb|BJ467760.1|BJ467760 BJ467760 K. Sato unpublished cDNA li... 85 3e-041
gb|BF257748.2|BF257748 HVSMEf0013M04f Hordeum vulgare seedl... 126 4e-041
gb|CB879386.1|CB879386 HP02A07w HP Hordeum vulgare subsp. v... 83 4e-041
gb|AV924347.1|AV924347 AV924347 K. Sato unpublished cDNA li... 98 2e-040
gb|BJ466406.1|BJ466406 BJ466406 K. Sato unpublished cDNA li... 79 7e-040
gb|BF254088.2|BF254088 HVSMEf0002P22f Hordeum vulgare seedl... 100 9e-040
gb|BJ463768.1|BJ463768 BJ463768 K. Sato unpublished cDNA li... 74 2e-039
gb|BF255022.2|BF255022 HVSMEf0005K23f Hordeum vulgare seedl... 99 3e-039
gb|BF253494.2|BF253494 HVSMEf0001B12f Hordeum vulgare seedl... 79 4e-039
gb|BJ468058.1|BJ468058 BJ468058 K. Sato unpublished cDNA li... 79 4e-039
gb|BG300362.1|BG300362 HVSMEb0016B12f Hordeum vulgare seedl... 94 4e-039
gb|CD662288.1|CD662288 UCRHV18_01aa10_b1 Drought-stressed D... 97 6e-039
gb|CD663812.1|CD663812 UCRHV18_06ch08_b1 Drought-stressed D... 97 6e-039
gb|BI778623.2|BI778623 EBro07_SQ003_N10_R root, 3 week, red... 84 8e-039
gb|AL505819.1|AL505819 AL505819 Hordeum vulgare Barke roots... 83 4e-038
gb|CD663904.1|CD663904 UCRHV18_07ab10_b1 Drought-stressed D... 94 7e-038
gb|BF257415.2|BF257415 HVSMEf0012N14f Hordeum vulgare seedl... 83 1e-037
gb|AV921351.1|AV921351 AV921351 K. Sato unpublished cDNA li... 79 1e-037
gb|BF256832.2|BF256832 HVSMEf0011C05f Hordeum vulgare seedl... 79 1e-037
gb|AV915515.1|AV915515 AV915515 K. Sato unpublished cDNA li... 71 2e-037
gb|AV913405.1|AV913405 AV913405 K. Sato unpublished cDNA li... 79 3e-037
gb|AV921748.1|AV921748 AV921748 K. Sato unpublished cDNA li... 85 5e-037
gb|BF258733.1|BF258733 HVSMEf0016I14f Hordeum vulgare seedl... 83 6e-037
gb|BF254372.2|BF254372 HVSMEf0003M21f Hordeum vulgare seedl... 97 6e-037
gb|AL450982.1|AL450982 AL450982 Hordeum vulgare Barke etiol... 87 6e-037
gb|BF260927.2|BF260927 HVSMEf0023E23f Hordeum vulgare seedl... 91 6e-037
gb|AV930320.1|AV930320 AV930320 K. Sato unpublished cDNA li... 101 7e-037
gb|BF254577.2|BF254577 HVSMEf0004G15f Hordeum vulgare seedl... 79 2e-036
gb|BJ468872.1|BJ468872 BJ468872 K. Sato unpublished cDNA li... 99 4e-036
gb|AV915283.1|AV915283 AV915283 K. Sato unpublished cDNA li... 81 4e-036
gb|BF257975.2|BF257975 HVSMEf0014G07f Hordeum vulgare seedl... 72 6e-036
gb|AV918926.1|AV918926 AV918926 K. Sato unpublished cDNA li... 79 6e-036
gb|AL503406.1|AL503406 AL503406 Hordeum vulgare Barke roots... 100 8e-036
gb|BQ768678.1|BQ768678 EBro08_SQ012_J09_R root, 3 week, dro... 80 8e-036
gb|BF255884.2|BF255884 HVSMEf0008B14f Hordeum vulgare seedl... 76 1e-035
gb|BF258596.2|BF258596 HVSMEf0016C17f Hordeum vulgare seedl... 100 2e-035
gb|BF257879.2|BF257879 HVSMEf0014B23f Hordeum vulgare seedl... 100 2e-035
gb|BG300069.1|BG300069 HVSMEb0011D24f Hordeum vulgare seedl... 100 2e-035
gb|AV924443.1|AV924443 AV924443 K. Sato unpublished cDNA li... 100 2e-035
gb|AL503613.1|AL503613 AL503613 Hordeum vulgare Barke roots... 81 3e-035
gb|BJ468231.1|BJ468231 BJ468231 K. Sato unpublished cDNA li... 85 5e-035
gb|BJ465101.1|BJ465101 BJ465101 K. Sato unpublished cDNA li... 109 5e-035
gb|AV916428.1|AV916428 AV916428 K. Sato unpublished cDNA li... 109 5e-035
gb|BJ465100.1|BJ465100 BJ465100 K. Sato unpublished cDNA li... 109 5e-035
gb|BF258896.1|BF258896 HVSMEf0016P14f Hordeum vulgare seedl... 100 7e-035
gb|BJ464939.1|BJ464939 BJ464939 K. Sato unpublished cDNA li... 105 7e-035
gb|AV913744.1|AV913744 AV913744 K. Sato unpublished cDNA li... 105 7e-035
gb|AV913622.1|AV913622 AV913622 K. Sato unpublished cDNA li... 105 7e-035
gb|AV916549.1|AV916549 AV916549 K. Sato unpublished cDNA li... 105 7e-035
gb|BJ467944.1|BJ467944 BJ467944 K. Sato unpublished cDNA li... 85 1e-034
gb|BJ468232.1|BJ468232 BJ468232 K. Sato unpublished cDNA li... 85 1e-034
gb|BF257563.2|BF257563 HVSMEf0013E02f Hordeum vulgare seedl... 106 1e-034
gb|BF253855.2|BF253855 HVSMEf0002E24f Hordeum vulgare seedl... 100 2e-034
gb|AV917258.1|AV917258 AV917258 K. Sato unpublished cDNA li... 79 5e-034
gb|AV922427.1|AV922427 AV922427 K. Sato unpublished cDNA li... 79 5e-034
gb|BJ464128.1|BJ464128 BJ464128 K. Sato unpublished cDNA li... 100 5e-034
gb|BJ465166.1|BJ465166 BJ465166 K. Sato unpublished cDNA li... 101 9e-034
gb|AV913573.1|AV913573 AV913573 K. Sato unpublished cDNA li... 74 3e-033
gb|AV929534.1|AV929534 AV929534 K. Sato unpublished cDNA li... 79 5e-033
gb|BI777619.2|BI777619 EBro08_SQ001_A05_R root, 3 week, dro... 79 7e-033
gb|AV928262.1|AV928262 AV928262 K. Sato unpublished cDNA li... 91 1e-032
gb|AV930452.1|AV930452 AV930452 K. Sato unpublished cDNA li... 97 1e-032
gb|BF258909.2|BF258909 HVSMEf0017A08f Hordeum vulgare seedl... 90 2e-032
gb|AV916317.1|AV916317 AV916317 K. Sato unpublished cDNA li... 84 2e-032
gb|BQ662115.1|BQ662115 HR01K01u HR Hordeum vulgare subsp. v... 91 2e-032
gb|BF626135.2|BF626135 HVSMEa0015P20f Hordeum vulgare seedl... 108 3e-032
gb|BF253693.3|BF253693 HVSMEf0001N20f Hordeum vulgare seedl... 74 7e-032
gb|AV931831.1|AV931831 AV931831 K. Sato unpublished cDNA li... 101 9e-032
gb|AV928022.1|AV928022 AV928022 K. Sato unpublished cDNA li... 101 9e-032
gb|BG310376.1|BG310376 HVSMEc0018B10f Hordeum vulgare seedl... 95 1e-031
gb|AV918703.1|AV918703 AV918703 K. Sato unpublished cDNA li... 79 1e-031
gb|AV918077.1|AV918077 AV918077 K. Sato unpublished cDNA li... 79 1e-031
gb|AV925792.1|AV925792 AV925792 K. Sato unpublished cDNA li... 99 1e-031
gb|AV931161.1|AV931161 AV931161 K. Sato unpublished cDNA li... 107 1e-031
gb|AV836790.1|AV836790 AV836790 K. Sato unpublished cDNA li... 79 2e-031
gb|AL504019.1|AL504019 AL504019 Hordeum vulgare Barke roots... 99 2e-031
gb|BF256472.2|BF256472 HVSMEf0010B05f Hordeum vulgare seedl... 74 2e-031
gb|BF257695.2|BF257695 HVSMEf0013J23f Hordeum vulgare seedl... 75 4e-031
gb|AV920613.1|AV920613 AV920613 K. Sato unpublished cDNA li... 79 5e-031
gb|AV930527.1|AV930527 AV930527 K. Sato unpublished cDNA li... 101 6e-031
gb|BF259978.2|BF259978 HVSMEf0020M11f Hordeum vulgare seedl... 68 6e-031
gb|BQ467978.1|BQ467978 HR01I14r HR Hordeum vulgare subsp. v... 109 6e-031
gb|BF629846.2|BF629846 HVSMEb0007B06f Hordeum vulgare seedl... 105 2e-030
gb|BF259414.3|BF259414 HVSMEf0019A18f Hordeum vulgare seedl... 56 3e-030
gb|AL503891.1|AL503891 AL503891 Hordeum vulgare Barke roots... 74 3e-030
gb|AV929439.1|AV929439 AV929439 K. Sato unpublished cDNA li... 91 4e-030
gb|AV931697.1|AV931697 AV931697 K. Sato unpublished cDNA li... 101 5e-030
gb|AV917949.1|AV917949 AV917949 K. Sato unpublished cDNA li... 85 6e-030
gb|BF256054.2|BF256054 HVSMEf0008J16f Hordeum vulgare seedl... 77 6e-030
emb|X77467.1|HVOMET H.vulgare L. mRNA for flavonoid 7-O-met... 68 7e-030
gb|AV926277.1|AV926277 AV926277 K. Sato unpublished cDNA li... 109 5e-029
gb|BM817329.1|BM817329 HC105E06_T3.ab1 HC Hordeum vulgare s... 82 6e-029
gb|AL501392.1|AL501392 AL501392 Hordeum vulgare Barke roots... 82 1e-028
gb|BF253643.2|BF253643 HVSMEf0001L12f Hordeum vulgare seedl... 109 1e-028
gb|BF260253.2|BF260253 HVSMEf0021I05f Hordeum vulgare seedl... 93 2e-028
gb|AL499854.1|AL499854 AL499854 Hordeum vulgare Barke etiol... 79 2e-028
gb|AV918876.1|AV918876 AV918876 K. Sato unpublished cDNA li... 85 6e-028
gb|BQ662094.1|BQ662094 HR01I14u HR Hordeum vulgare subsp. v... 85 6e-028
gb|AL502883.1|AL502883 AL502883 Hordeum vulgare Barke roots... 83 3e-027
gb|AV920383.1|AV920383 AV920383 K. Sato unpublished cDNA li... 91 3e-027
gb|BF258007.2|BF258007 HVSMEf0014H17f Hordeum vulgare seedl... 76 2e-026
gb|AL505788.1|AL505788 AL505788 Hordeum vulgare Barke roots... 100 2e-026
gb|BF253847.2|BF253847 HVSMEf0002E15f Hordeum vulgare seedl... 75 2e-026
gb|BF617480.2|BF617480 HVSMEc0017J06f Hordeum vulgare seedl... 86 4e-026
gb|AV923798.1|AV923798 AV923798 K. Sato unpublished cDNA li... 96 4e-026
gb|AV927324.1|AV927324 AV927324 K. Sato unpublished cDNA li... 101 1e-025
gb|CD662211.1|CD662211 UCRHV18_01af07_b1 Drought-stressed D... 101 1e-025
gb|CD663190.1|CD663190 UCRHV18_04cf12_b1 Drought-stressed D... 101 1e-025
gb|CD662527.1|CD662527 UCRHV18_02ba04_b1 Drought-stressed D... 101 1e-025
gb|AL450686.1|AL450686 AL450686 Hordeum vulgare Barke etiol... 79 1e-025
gb|CD663222.1|CD663222 UCRHV18_04db05_b1 Drought-stressed D... 79 2e-025
gb|BQ765323.1|BQ765323 EBro03_SQ006_H23_R root, 3 week, wat... 109 5e-025
gb|AV930495.1|AV930495 AV930495 K. Sato unpublished cDNA li... 101 6e-025
gb|AL502790.1|AL502790 AL502790 Hordeum vulgare Barke roots... 76 1e-024
gb|CD663459.1|CD663459 UCRHV18_05cc01_b1 Drought-stressed D... 94 2e-024
gb|AV931170.1|AV931170 AV931170 K. Sato unpublished cDNA li... 97 2e-024
gb|BF260237.3|BF260237 HVSMEf0021H13f Hordeum vulgare seedl... 82 1e-023
gb|AL503073.1|AL503073 AL503073 Hordeum vulgare Barke roots... 76 1e-023
gb|AV928023.1|AV928023 AV928023 K. Sato unpublished cDNA li... 76 1e-023
gb|AL505623.1|AL505623 AL505623 Hordeum vulgare Barke roots... 109 5e-023
gb|AL504425.1|AL504425 AL504425 Hordeum vulgare Barke roots... 108 7e-023
gb|BF259032.2|BF259032 HVSMEf0017H09f Hordeum vulgare seedl... 62 1e-022
gb|BF630065.2|BF630065 HVSMEb0007N10f Hordeum vulgare seedl... 107 1e-022
gb|BF259471.1|BF259471 HVSMEf0019D06f Hordeum vulgare seedl... 68 4e-022
gb|BF624433.3|BF624433 HVSMEa0016B18f Hordeum vulgare seedl... 56 1e-021
gb|AL503161.1|AL503161 AL503161 Hordeum vulgare Barke roots... 85 2e-021
gb|AL500356.1|AL500356 AL500356 Hordeum vulgare Barke etiol... 101 8e-021
gb|AV927543.1|AV927543 AV927543 K. Sato unpublished cDNA li... 101 8e-021
>gb|BF620538.3|BF620538 HVSMEc0020C24f Hordeum vulgare seedling shoot EST library HVcDNA0003
(Etiolated and unstressed) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEc0020C24f, mRNA sequence
Length = 673
Score = 109 bits (232), Expect(4) = 4e-063
Identities = 45/84 (53%), Positives = 62/84 (73%)
Frame = -1 / +2
Query: 1419 PSDAELLKAQADIWRLSLSYLTPLSLRCAVELGIPTAIYRHGGAASAAELVTALSLPSAK 1240
P+DA+L++AQAD+WR SL +LT ++LRCAV+LGIPTAI+R GG S ++LVTALSLP +K
Sbjct: 26 PTDAQLIQAQADLWRHSLCHLTAMALRCAVQLGIPTAIHRLGGTTSVSDLVTALSLPQSK 205
Query: 1239 LPFXXXXXXXLAASGVFTVDRQST 1168
+P+ LA SG ++ T
Sbjct: 206 MPYLGRVLRLLATSGALASPKEGT 277
Score = 86.8 bits (183), Expect(4) = 4e-063
Identities = 35/64 (54%), Positives = 45/64 (70%)
Frame = -1 / +2
Query: 1002 SPFEELHGATLFHESMGSLDADFHDMASEALDAHDNFGIEIAMREFRDLFEGIQSMTYCC 823
SPFE++HGATL ESM LD + ++ EAL AHD+ GI +RE DLF+G+QS+T CC
Sbjct: 437 SPFEDVHGATLCEESMALLDPESDELFHEALAAHDHLGIGTILRECHDLFKGVQSLTDCC 616
Query: 822 GNFG 811
G G
Sbjct: 617 GGDG 628
Score = 80.8 bits (170), Expect(4) = 2e-042
Identities = 43/81 (53%), Positives = 46/81 (56%)
Frame = +2 / -2
Query: 1178 LSTVNTPDAAXXXXXXXXNGSLAEGRDSAVTSSAAEAAPPWR*IAVGMPSSTAHLSDRGV 1357
L PD A G L GRD+AVT S + PP R*IAVGMPS TAHLS V
Sbjct: 267 LGDAKAPDVANNRKTRPRYGILDCGRDNAVTRSDTDVVPPSR*IAVGMPSWTAHLSAMAV 88
Query: 1358 R*ERLSRHMSACAFSSSASLG 1420
R RL RH SACA S AS+G
Sbjct: 87 RWHRLWRHRSACA*ISWASVG 25
Score = 73.0 bits (153), Expect(4) = 2e-042
Identities = 35/64 (54%), Positives = 41/64 (64%)
Frame = +2 / -2
Query: 812 PKLPQQ*VMDWIPSNKSLNSRIAISMPKLSWASKASLAMSWKSASRLPMLSWNRVAPCSS 991
P PQQ V DW P NKS +SR + +PK SWA+KAS S S SR +LS VAP +S
Sbjct: 627 PSPPQQSVSDWTPLNKSWHSRNIVPIPKWSWAAKASWNNSSDSGSRRAILSSQSVAP*TS 448
Query: 992 SNGD 1003
SNGD
Sbjct: 447 SNGD 436
Score = 65.7 bits (137), Expect(4) = 4e-063
Identities = 27/59 (45%), Positives = 39/59 (66%)
Frame = -1 / +2
Query: 1173 STEEERYRISPVSYLLVDGIPHEDHMNHTALVLTCTSTRYIEAGIGLAEWFKRDVVTSP 997
S +E Y + P+SYLLVDG+ + + AL+L+ TS IEA +GLA+WFK+D+ P
Sbjct: 260 SPKEGTYSLVPLSYLLVDGVFIDGEASQKALLLSTTSRYNIEAALGLADWFKKDITPPP 436
Score = 41.8 bits (85), Expect(4) = 2e-042
Identities = 25/53 (47%), Positives = 29/53 (54%)
Frame = +2 / -2
Query: 986 SSSNGDVTTSLLNHSASPIPASM*RVEVQVSTRAVWFMWSS*GMPSTRR*DTG 1144
S+ +G S LN SASP ASM +EV S RA S PSTRR D+G
Sbjct: 447 SNGDGGGVMSFLNQSASPKAASMLYLEVVESKRAF*LASPSMNTPSTRRYDSG 289
Score = 38.2 bits (77), Expect(4) = 4e-063
Identities = 15/18 (83%), Positives = 15/18 (83%)
Frame = -1 / +2
Query: 813 GDDKGARAIVKAFPHIKC 760
GD ARAIVKAFPHIKC
Sbjct: 620 GDGTTARAIVKAFPHIKC 673
Score = 34.1 bits (68), Expect(4) = 2e-042
Identities = 13/18 (72%), Positives = 15/18 (83%)
Frame = +2 / -2
Query: 761 HFMCGKALTMALAPLSSP 814
H +CGKALTMALA + SP
Sbjct: 672 HLICGKALTMALAVVPSP 619
>gb|BM817346.1|BM817346 HC111F01_T3.ab1 HC Hordeum vulgare subsp. vulgare cDNA clone
HC111F01_T3.ab1 similar to Hexaprenyldihydroxybenzoate
methyltransferase,Apigenin 4'-O-methyltransferase,[Myelin
basic protein]-arginine N-methyltransferase,Catechol
O-methyltransferase,Glycoprotein-fucosylgalactoside
alpha-galactosyltransferase,, mRNA sequence
Length = 905
Score = 88.6 bits (187), Expect(5) = 5e-063
Identities = 35/69 (50%), Positives = 47/69 (68%)
Frame = -1 / +3
Query: 1017 RDVVTSPFEELHGATLFHESMGSLDADFHDMASEALDAHDNFGIEIAMREFRDLFEGIQS 838
R + SPFE++HGA+LF ES LD + ++ +E L AHDN GI MRE DLF+G++S
Sbjct: 96 RGRLPSPFEDVHGASLFDESTALLDKELDELVTEGLAAHDNLGIGTIMRECHDLFKGLES 275
Query: 837 MTYCCGNFG 811
+T CCG G
Sbjct: 276 LTDCCGGDG 302
Score = 73.5 bits (154), Expect(5) = 5e-063
Identities = 30/72 (41%), Positives = 44/72 (61%)
Frame = -1 / +3
Query: 735 IATKPADGAMINYVEGDMFSFIPPAQTXXXXXXXXXLTDEECVKLLAQCRKAIPSRKDGG 556
+ K ++N V GD+F +P +Q +DE+CVK+L+QCR AIPS ++GG
Sbjct: 369 VIDKAPSDGIVNCVAGDLFHSVPKSQAVMLKLVLHHWSDEDCVKILSQCRDAIPSHEEGG 548
Query: 555 KVIIGDIMIDHS 520
KVII DI++ S
Sbjct: 549 KVIIIDIVVGPS 584
Score = 72.1 bits (151), Expect(4) = 1e-040
Identities = 34/69 (49%), Positives = 44/69 (63%)
Frame = +1 / -1
Query: 820 TAAVGHGLDPLEQVPELPHSYLDAEVVVGVQGLARHVVEICVEAPHALVEQSRPVQLLER 999
TAAVG L+PLE+V LPH DA+VV+G Q L +VE+ V+ ALVE+ R + +LER
Sbjct: 293 TAAVGERLEPLEEVMALPHDRADAKVVMGRQPLGDQLVELLVQERRALVEERRAMHVLER 114
Query: 1000 *RDHVPLEP 1026
R P P
Sbjct: 113 RRQPAP*RP 87
Score = 68.4 bits (143), Expect(5) = 5e-063
Identities = 28/47 (59%), Positives = 34/47 (72%)
Frame = -1 / +3
Query: 513 MLETHLLMDIGMMTMTKGRQRDEKEWSELFTKAGFSEYKILKEFGAR 373
M E LLMD+ M+ TK RQR E +W ELF KAGFS+YKI+K+ AR
Sbjct: 597 MFEAQLLMDMLMLVNTKSRQRTENDWHELFMKAGFSDYKIVKKLRAR 737
Score = 68.0 bits (142), Expect(4) = 2e-028
Identities = 31/64 (48%), Positives = 40/64 (62%)
Frame = +2 / -2
Query: 812 PKLPQQ*VMDWIPSNKSLNSRIAISMPKLSWASKASLAMSWKSASRLPMLSWNRVAPCSS 991
P PQQ V D P +S +SR+ + MP+LSWA+ S+ S S SR +LS APC+S
Sbjct: 301 PSPPQQSVRDSSPLKRSWHSRMIVPMPRLSWAASPSVTSSSSSLSRSAVLSSKSDAPCTS 122
Query: 992 SNGD 1003
SNGD
Sbjct: 121 SNGD 110
Score = 55.6 bits (115), Expect(4) = 1e-040
Identities = 26/58 (44%), Positives = 36/58 (62%)
Frame = +1 / -1
Query: 529 NHNITDYNFPAILP*RNRLPALSQELDALLIGQVVQHKL*HDSLSRWNETEHVTFDIV 702
+HNI + + ++L *RN +P L Q+LD +L+ VVQHKL H L + E VT D V
Sbjct: 575 HHNIYNDHLSSLLM*RNGIPTLRQDLDTVLVTPVVQHKLEHHRLRLGDGVEQVTSDTV 402
Score = 52.4 bits (108), Expect(5) = 5e-063
Identities = 21/34 (61%), Positives = 24/34 (70%)
Frame = -1 / +3
Query: 813 GDDKGARAIVKAFPHIKCTVLAPPKIIATKPADG 712
GD ARAI KA PH+KCTVL PK+I P+DG
Sbjct: 294 GDGTTARAITKAHPHVKCTVLDLPKVIDKAPSDG 395
Score = 51.5 bits (106), Expect(4) = 1e-040
Identities = 19/45 (42%), Positives = 27/45 (60%)
Frame = +1 / -1
Query: 379 SKFLQDLVFAEPCFGEELAPFFFISLPSFCHGHHADVHQEVSFQH 513
S+FL +L+ EPCF EEL P +L + C H VHQ++ +H
Sbjct: 731 SEFLDNLIVTEPCFHEELMPVILSTLTALCVHKHEHVHQKLGLKH 597
Score = 51.0 bits (105), Expect(4) = 2e-028
Identities = 25/52 (48%), Positives = 31/52 (59%)
Frame = +2 / -2
Query: 572 EGIAFRH*ARSLTHSSSVRWCSTSFSTTV*AGGMKLNMSPST*FIIAPSAGL 727
EG+A H* + LT SSS++WCSTS S T * G + N SP+T I L
Sbjct: 532 EGMASLH*DKILTQSSSLQWCSTSLSITA*DLGTEWNKSPATQLTIPSDGAL 377
Score = 44.6 bits (91), Expect(4) = 1e-040
Identities = 19/34 (55%), Positives = 24/34 (70%)
Frame = +2 / -2
Query: 713 PSAGLVAMILGGASTVHFMCGKALTMALAPLSSP 814
PS G +++ LG +STVH CG AL MALA + SP
Sbjct: 394 PSDGALSITLGRSSTVHLTCGCALVMALAVVPSP 293
Score = 40.5 bits (82), Expect(4) = 2e-028
Identities = 22/41 (53%), Positives = 25/41 (60%)
Frame = +2 / -2
Query: 374 RAPNSFRILYSLNPALVKSSLHSFSSLCRPFVMVIMPMSIR 496
RA + IL SLNPA +KSS SFS R FV M MSI+
Sbjct: 736 RARSFLTIL*SLNPAFMKSSCQSFSVR*RLFVFTSMSMSIK 614
Score = 34.5 bits (69), Expect(5) = 5e-063
Identities = 12/20 (60%), Positives = 16/20 (80%)
Frame = -1 / +2
Query: 1068 TSTRYIEAGIGLAEWFKRDV 1009
TS Y EA +GLA+WF++DV
Sbjct: 35 TSPFYTEAALGLADWFRKDV 94
Score = 22.6 bits (43), Expect(4) = 2e-028
Identities = 6/7 (85%), Positives = 7/7 (100%)
Frame = +3 / -3
Query: 741 WEGPAQC 761
WEGPA+C
Sbjct: 366 WEGPARC 346
>gb|AL503330.1|AL503330 AL503330 Hordeum vulgare Barke roots Hordeum vulgare subsp. vulgare
cDNA clone HW01K22T 5', mRNA sequence
Length = 700
Score = 82.6 bits (174), Expect(5) = 5e-062
Identities = 32/66 (48%), Positives = 45/66 (68%)
Frame = -1 / +1
Query: 1008 VTSPFEELHGATLFHESMGSLDADFHDMASEALDAHDNFGIEIAMREFRDLFEGIQSMTY 829
V S FE++H A+LF ES +LD + + ++ L+AHDN GI MRE DLF+G++S+T
Sbjct: 82 VPSVFEDVHSASLFDESTAALDPELDALVTDGLEAHDNLGIGTIMRECHDLFKGLESLTD 261
Query: 828 CCGNFG 811
CCG G
Sbjct: 262 CCGGDG 279
Score = 79.4 bits (167), Expect(5) = 5e-062
Identities = 30/72 (41%), Positives = 46/72 (63%)
Frame = -1 / +1
Query: 735 IATKPADGAMINYVEGDMFSFIPPAQTXXXXXXXXXLTDEECVKLLAQCRKAIPSRKDGG 556
+ K ++NYV GD+F +P AQ +D++CVK+L QC+ AIPSR++GG
Sbjct: 346 VIEKTPSDCVVNYVAGDLFHTVPKAQAVMLKLVLHHWSDDDCVKILTQCKNAIPSREEGG 525
Query: 555 KVIIGDIMIDHS 520
KVI+ DI+++ S
Sbjct: 526 KVIVIDIVVEPS 561
Score = 62.9 bits (131), Expect(5) = 5e-062
Identities = 23/42 (54%), Positives = 31/42 (73%)
Frame = -1 / +1
Query: 513 MLETHLLMDIGMMTMTKGRQRDEKEWSELFTKAGFSEYKILK 388
M E LMD+ M+ T+GRQR E +W +LF KAGF++YKI+K
Sbjct: 574 MFEAQTLMDMLMLVFTRGRQRSENDWRDLFMKAGFTDYKIIK 699
Score = 59.7 bits (124), Expect(5) = 7e-038
Identities = 27/44 (61%), Positives = 31/44 (70%)
Frame = +2 / -3
Query: 569 REGIAFRH*ARSLTHSSSVRWCSTSFSTTV*AGGMKLNMSPST* 700
REG+AF H R T SSS++WCSTSFS T *A G N SP+T*
Sbjct: 512 REGMAFLHWVRIFTQSSSLQWCSTSFSITA*AFGTVWNRSPAT* 381
Score = 59.3 bits (123), Expect(5) = 7e-038
Identities = 28/66 (42%), Positives = 40/66 (60%)
Frame = +2 / -3
Query: 812 PKLPQQ*VMDWIPSNKSLNSRIAISMPKLSWASKASLAMSWKSASRLPMLSWNRVAPCSS 991
P PQQ V D P +S +SR+ + +P+LSWAS+ S+ + S S+ +LS A C+S
Sbjct: 278 PSPPQQSVRDSSPLKRSWHSRMMVPIPRLSWASRPSVTSASSSGSKAAVLSSKSDALCTS 99
Query: 992 SNGDVT 1009
SN D T
Sbjct: 98 SNTDGT 81
Score = 57.0 bits (118), Expect(3) = 4e-023
Identities = 25/58 (43%), Positives = 36/58 (62%)
Frame = +1 / -2
Query: 529 NHNITDYNFPAILP*RNRLPALSQELDALLIGQVVQHKL*HDSLSRWNETEHVTFDIV 702
+H+I D + P++L RN + L +L +++ VVQHKL H LS W+ E VT DIV
Sbjct: 552 DHDINDNHLPSLLTGRNGILTLG*DLHTIVVTPVVQHKLQHHCLSLWDGVEQVTSDIV 379
Score = 54.7 bits (113), Expect(3) = 4e-023
Identities = 28/69 (40%), Positives = 38/69 (55%)
Frame = +1 / -2
Query: 790 GPGTLVITEVTAAVGHGLDPLEQVPELPHSYLDAEVVVGVQGLARHVVEICVEAPHALVE 969
G G ++ T AV L PLE+V L H D +VVVG Q + VE+ V+ ALVE
Sbjct: 300 GDGPRCLSITTTAVCERLKPLEEVMALTHDGADTQVVVGFQTIGDQRVELWVQGRGALVE 121
Query: 970 QSRPVQLLE 996
+ R + +LE
Sbjct: 120 ERRAMHVLE 94
Score = 52.8 bits (109), Expect(5) = 5e-062
Identities = 21/33 (63%), Positives = 24/33 (72%)
Frame = -1 / +1
Query: 813 GDDKGARAIVKAFPHIKCTVLAPPKIIATKPAD 715
GD K ARAI KA PH+KCTVL PK+I P+D
Sbjct: 271 GDGKTARAITKAHPHVKCTVLDLPKVIEKTPSD 369
Score = 43.2 bits (88), Expect(5) = 7e-038
Identities = 16/42 (38%), Positives = 23/42 (54%)
Frame = +1 / -2
Query: 388 LQDLVFAEPCFGEELAPFFFISLPSFCHGHHADVHQEVSFQH 513
L D V EPCF EE++P F +L + H VH+ + +H
Sbjct: 699 LDDFVVGEPCFHEEVSPVIFATLTASREHKHEHVHESLGLKH 574
Score = 42.8 bits (87), Expect(5) = 7e-038
Identities = 19/33 (57%), Positives = 22/33 (66%)
Frame = +2 / -3
Query: 716 SAGLVAMILGGASTVHFMCGKALTMALAPLSSP 814
S G+ +M LG +STVH CG AL MALA SP
Sbjct: 368 SDGVFSMTLGRSSTVHLTCGCALVMALAVFPSP 270
Score = 36.3 bits (73), Expect(5) = 5e-062
Identities = 12/19 (63%), Positives = 16/19 (84%)
Frame = -1 / +1
Query: 1065 STRYIEAGIGLAEWFKRDV 1009
S Y+EA +G+AEWFK+DV
Sbjct: 16 SPHYMEAALGMAEWFKKDV 72
Score = 35.0 bits (70), Expect(3) = 4e-023
Identities = 18/34 (52%), Positives = 21/34 (61%)
Frame = +2 / -3
Query: 395 ILYSLNPALVKSSLHSFSSLCRPFVMVIMPMSIR 496
IL S+NPA +K S SFS RP V M MS+R
Sbjct: 692 IL*SVNPAFMKRSRQSFSLR*RPLVNTSMSMSMR 591
Score = 26.3 bits (51), Expect(5) = 7e-038
Identities = 12/16 (75%), Positives = 12/16 (75%)
Frame = +2 / -3
Query: 1010 TSLLNHSASPIPASM* 1057
TS LNHSA P ASM*
Sbjct: 71 TSFLNHSAIPSAASM* 24
>gb|AV925342.1|AV925342 AV925342 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp. vulgare
cDNA clone basd22m18 5', mRNA sequence
Length = 665
Score = 110 bits (234), Expect(3) = 1e-060
Identities = 47/92 (51%), Positives = 65/92 (70%)
Frame = -1 / +1
Query: 1443 AMASEVVRPSDAELLKAQADIWRLSLSYLTPLSLRCAVELGIPTAIYRHGGAASAAELVT 1264
A A + P+DA+L++AQAD+WR SL +L ++LRCAV+LGIPTAI+R GG S ++LVT
Sbjct: 25 AQAPTMAVPTDAQLIQAQADLWRHSLCHLRAIALRCAVQLGIPTAIHRLGGTTSVSDLVT 204
Query: 1263 ALSLPSAKLPFXXXXXXXLAASGVFTVDRQST 1168
ALSLP +K+P+ LAASG ++ T
Sbjct: 205 ALSLPQSKMPYLGRVLRLLAASGALASPKEGT 300
Score = 90.4 bits (191), Expect(3) = 1e-060
Identities = 37/64 (57%), Positives = 45/64 (70%)
Frame = -1 / +1
Query: 1002 SPFEELHGATLFHESMGSLDADFHDMASEALDAHDNFGIEIAMREFRDLFEGIQSMTYCC 823
SPFE++HGATLF ESM LD + M EAL AHD+ GI +RE DLF+G+QS+T CC
Sbjct: 460 SPFEDVHGATLFEESMALLDPESDKMFHEALAAHDHLGIGTILRECHDLFKGVQSLTDCC 639
Query: 822 GNFG 811
G G
Sbjct: 640 GGDG 651
Score = 81.3 bits (171), Expect(3) = 1e-040
Identities = 43/81 (53%), Positives = 47/81 (58%)
Frame = +2 / -1
Query: 1178 LSTVNTPDAAXXXXXXXXNGSLAEGRDSAVTSSAAEAAPPWR*IAVGMPSSTAHLSDRGV 1357
L PDAA G L GRD+AVT S E PP R*IAVGMPS TAHLS +
Sbjct: 290 LGDAKAPDAANNRKTRPRYGILDCGRDNAVTRSDTEVVPPSR*IAVGMPSWTAHLSAMAL 111
Query: 1358 R*ERLSRHMSACAFSSSASLG 1420
R +L RH SACA S AS+G
Sbjct: 110 RWHKLWRHRSACA*ISWASVG 48
Score = 73.0 bits (153), Expect(3) = 1e-060
Identities = 29/59 (49%), Positives = 40/59 (67%)
Frame = -1 / +1
Query: 1173 STEEERYRISPVSYLLVDGIPHEDHMNHTALVLTCTSTRYIEAGIGLAEWFKRDVVTSP 997
S +E Y + P+SYLLVDG+ + + A+VLT TS YIEA +GLA+WFK+D+ P
Sbjct: 283 SPKEGTYSLVPLSYLLVDGVFIDGEASQKAIVLTTTSRHYIEAALGLADWFKKDIAPPP 459
Score = 71.6 bits (150), Expect(3) = 1e-040
Identities = 34/64 (53%), Positives = 41/64 (64%)
Frame = +2 / -1
Query: 812 PKLPQQ*VMDWIPSNKSLNSRIAISMPKLSWASKASLAMSWKSASRLPMLSWNRVAPCSS 991
P PQQ V DW P NKS +SR + +PK SWA+KAS + S SR +LS VAP +S
Sbjct: 650 PSPPQQSVSDWTPLNKSWHSRNIVPIPKWSWAAKASWNILSDSGSRSAILSSKSVAP*TS 471
Query: 992 SNGD 1003
SNGD
Sbjct: 470 SNGD 459
Score = 53.3 bits (110), Expect(3) = 1e-040
Identities = 28/53 (52%), Positives = 32/53 (60%)
Frame = +2 / -1
Query: 986 SSSNGDVTTSLLNHSASPIPASM*RVEVQVSTRAVWFMWSS*GMPSTRR*DTG 1144
S+ +G S LN SASP ASM* +EV VST A W S PSTRR D+G
Sbjct: 470 SNGDGGGAMSFLNQSASPKAASM*CLEVVVSTMAFWLASPSMNTPSTRRYDSG 312
>gb|AV926997.1|AV926997 AV926997 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp. vulgare
cDNA clone basd26g01 5', mRNA sequence
Length = 672
Score = 108 bits (230), Expect(3) = 4e-060
Identities = 45/84 (53%), Positives = 62/84 (73%)
Frame = -1 / +3
Query: 1419 PSDAELLKAQADIWRLSLSYLTPLSLRCAVELGIPTAIYRHGGAASAAELVTALSLPSAK 1240
P+DA+L++AQAD+WR SL +L ++LRCAV+LGIPTAI+R GG S ++LVTALSLP +K
Sbjct: 57 PTDAQLIQAQADLWRHSLCHLRAIALRCAVQLGIPTAIHRLGGTTSVSDLVTALSLPQSK 236
Query: 1239 LPFXXXXXXXLAASGVFTVDRQST 1168
+P+ LAASG ++ T
Sbjct: 237 MPYLGRVLRLLAASGALASPKEGT 308
Score = 90.4 bits (191), Expect(3) = 4e-060
Identities = 37/64 (57%), Positives = 45/64 (70%)
Frame = -1 / +3
Query: 1002 SPFEELHGATLFHESMGSLDADFHDMASEALDAHDNFGIEIAMREFRDLFEGIQSMTYCC 823
SPFE++HGATLF ESM LD + M EAL AHD+ GI +RE DLF+G+QS+T CC
Sbjct: 468 SPFEDVHGATLFEESMALLDPESDKMFHEALAAHDHLGIGTILRECHDLFKGVQSLTDCC 647
Query: 822 GNFG 811
G G
Sbjct: 648 GGDG 659
Score = 81.3 bits (171), Expect(3) = 1e-040
Identities = 43/81 (53%), Positives = 47/81 (58%)
Frame = +2 / -3
Query: 1178 LSTVNTPDAAXXXXXXXXNGSLAEGRDSAVTSSAAEAAPPWR*IAVGMPSSTAHLSDRGV 1357
L PDAA G L GRD+AVT S E PP R*IAVGMPS TAHLS +
Sbjct: 298 LGDAKAPDAANNRKTRPRYGILDCGRDNAVTRSDTEVVPPSR*IAVGMPSWTAHLSAMAL 119
Query: 1358 R*ERLSRHMSACAFSSSASLG 1420
R +L RH SACA S AS+G
Sbjct: 118 RWHKLWRHRSACA*ISWASVG 56
Score = 73.0 bits (153), Expect(3) = 4e-060
Identities = 29/59 (49%), Positives = 40/59 (67%)
Frame = -1 / +3
Query: 1173 STEEERYRISPVSYLLVDGIPHEDHMNHTALVLTCTSTRYIEAGIGLAEWFKRDVVTSP 997
S +E Y + P+SYLLVDG+ + + A+VLT TS YIEA +GLA+WFK+D+ P
Sbjct: 291 SPKEGTYSLVPLSYLLVDGVFIDGEASQKAIVLTTTSRHYIEAALGLADWFKKDIAPPP 467
Score = 71.6 bits (150), Expect(3) = 1e-040
Identities = 34/64 (53%), Positives = 41/64 (64%)
Frame = +2 / -3
Query: 812 PKLPQQ*VMDWIPSNKSLNSRIAISMPKLSWASKASLAMSWKSASRLPMLSWNRVAPCSS 991
P PQQ V DW P NKS +SR + +PK SWA+KAS + S SR +LS VAP +S
Sbjct: 658 PSPPQQSVSDWTPLNKSWHSRNIVPIPKWSWAAKASWNILSDSGSRSAILSSKSVAP*TS 479
Query: 992 SNGD 1003
SNGD
Sbjct: 478 SNGD 467
Score = 53.3 bits (110), Expect(3) = 1e-040
Identities = 28/53 (52%), Positives = 32/53 (60%)
Frame = +2 / -3
Query: 986 SSSNGDVTTSLLNHSASPIPASM*RVEVQVSTRAVWFMWSS*GMPSTRR*DTG 1144
S+ +G S LN SASP ASM* +EV VST A W S PSTRR D+G
Sbjct: 478 SNGDGGGAMSFLNQSASPKAASM*CLEVVVSTMAFWLASPSMNTPSTRRYDSG 320
>gb|BF260521.2|BF260521 HVSMEf0022D17f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEf0022D17f, mRNA sequence
Length = 805
Score = 98.7 bits (209), Expect(4) = 8e-060
Identities = 42/71 (59%), Positives = 54/71 (76%)
Frame = -1 / +2
Query: 1443 AMASEVVRPSDAELLKAQADIWRLSLSYLTPLSLRCAVELGIPTAIYRHGGAASAAELVT 1264
A + + P+DA+L+KAQAD+ R SL+YLT ++LRCA+ELGIPTAI R GG AS +L+
Sbjct: 14 AQSQTMTVPTDAQLIKAQADLQRHSLTYLTSMALRCAIELGIPTAIQRLGGTASLPDLMA 193
Query: 1263 ALSLPSAKLPF 1231
ALSLP K PF
Sbjct: 194 ALSLPPPKAPF 226
Score = 79.0 bits (166), Expect(4) = 8e-060
Identities = 34/66 (51%), Positives = 42/66 (63%)
Frame = -1 / +2
Query: 1008 VTSPFEELHGATLFHESMGSLDADFHDMASEALDAHDNFGIEIAMREFRDLFEGIQSMTY 829
V SPFE +H A F ESM LD + + EAL AHD+ GI +RE R LF+G+QS+T
Sbjct: 446 VPSPFEHVHAAAPFDESMTLLDPETDKLFYEALAAHDHMGIGTVLRECRGLFDGLQSLTD 625
Query: 828 CCGNFG 811
CCG G
Sbjct: 626 CCGGDG 643
Score = 76.2 bits (160), Expect(4) = 8e-039
Identities = 40/74 (54%), Positives = 43/74 (58%)
Frame = +2 / -2
Query: 1199 DAAXXXXXXXXNGSLAEGRDSAVTSSAAEAAPPWR*IAVGMPSSTAHLSDRGVR*ERLSR 1378
D A NG+L G DSA S +A PP R IAVGMPSS AHLS VR* RL R
Sbjct: 258 DLASSRRTRLRNGALGGGSDSAAIRSGKDAVPPRRWIAVGMPSSMAHLSAMDVR*VRLWR 79
Query: 1379 HMSACAFSSSASLG 1420
SACA S AS+G
Sbjct: 78 CRSACALISWASVG 37
Score = 70.7 bits (148), Expect(3) = 4e-024
Identities = 36/70 (51%), Positives = 45/70 (64%)
Frame = +1 / -1
Query: 1204 GEEPQQAAEERQLSGGERQRRDQLSG*GSPAMAVDRRRDAKLHGAPQ*QGREVGEAEPPY 1383
G++PQ AAE+R+ +RQR Q+ A A+DRRRDA+L GAP+ GREVGEA
Sbjct: 253 GQQPQDAAEKRRFGWRKRQRGHQVGQGRGAAEALDRRRDAELDGAPECHGREVGEAVALQ 74
Query: 1384 VGLCL**LGV 1413
V L L LGV
Sbjct: 73 VSLRLDQLGV 44
Score = 57.4 bits (119), Expect(4) = 8e-060
Identities = 22/53 (41%), Positives = 33/53 (62%)
Frame = -1 / +2
Query: 1170 TEEERYRISPVSYLLVDGIPHEDHMNHTALVLTCTSTRYIEAGIGLAEWFKRD 1012
TE Y ++P+SY+LVDG+ + L TS ++E+G+GLA+WFK D
Sbjct: 275 TEAGIYSLTPLSYILVDGVLIDGEARQVTFPLAVTSRYHMESGLGLADWFKND 433
Score = 57.0 bits (118), Expect(4) = 8e-039
Identities = 31/71 (43%), Positives = 39/71 (54%)
Frame = +2 / -2
Query: 812 PKLPQQ*VMDWIPSNKSLNSRIAISMPKLSWASKASLAMSWKSASRLPMLSWNRVAPCSS 991
P PQQ V D PSN+ +SR + +P SWA++AS S S MLS A C+
Sbjct: 642 PSPPQQSVSDCRPSNRPRHSRSTVPIPIWSWAARAS*NSLSVSGSSSVMLSSKGAAACTC 463
Query: 992 SNGDVTTSLLN 1024
SNGD T S L+
Sbjct: 462 SNGDGTGSKLS 430
Score = 53.8 bits (111), Expect(4) = 8e-060
Identities = 22/34 (64%), Positives = 24/34 (70%)
Frame = -1 / +2
Query: 813 GDDKGARAIVKAFPHIKCTVLAPPKIIATKPADG 712
GD ARAIVKAFPHIKC V PK+I P+DG
Sbjct: 635 GDGTTARAIVKAFPHIKCNVFDLPKVIDKAPSDG 736
Score = 50.1 bits (103), Expect(3) = 4e-024
Identities = 25/58 (43%), Positives = 32/58 (55%)
Frame = +1 / -1
Query: 823 AAVGHGLDPLEQVPELPHSYLDAEVVVGVQGLARHVVEICVEAPHALVEQSRPVQLLE 996
AAVG L +EQ P D +V+G QGL +V + VE HALVE R V +L+
Sbjct: 631 AAVGE*LQAIEQATAFPQHRADPHMVMGGQGLVEQLVGLRVEQRHALVEGRRRVHMLK 458
Score = 47.3 bits (97), Expect(4) = 8e-039
Identities = 18/34 (52%), Positives = 26/34 (76%)
Frame = +2 / -2
Query: 713 PSAGLVAMILGGASTVHFMCGKALTMALAPLSSP 814
PS G +++ G ++T+H +CGKALTMALA + SP
Sbjct: 735 PSLGALSITFGRSNTLHLICGKALTMALAVVPSP 634
Score = 36.8 bits (74), Expect(4) = 8e-039
Identities = 21/45 (46%), Positives = 24/45 (53%)
Frame = +2 / -2
Query: 1013 SLLNHSASPIPASM*RVEVQVSTRAVWFMWSS*GMPSTRR*DTGL 1147
S LN SA P P SM* EV S + S PSTR *D+G+
Sbjct: 432 SFLNQSARPRPDSM*YREVTASGKVTCLASPSMSTPSTRM*DSGV 298
Score = 35.0 bits (70), Expect(3) = 4e-024
Identities = 12/23 (52%), Positives = 13/23 (56%)
Frame = +3 / -3
Query: 747 GPAQCILCVGRL*QWPWHPCHHR 815
G C GRL*+WPW HHR
Sbjct: 701 GQTHCT*YAGRL*RWPWPSSHHR 633
>gb|BF256773.2|BF256773 HVSMEf0010P15f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEf0010P15f, mRNA sequence
Length = 850
Score = 98.7 bits (209), Expect(4) = 2e-058
Identities = 42/71 (59%), Positives = 54/71 (76%)
Frame = -1 / +2
Query: 1443 AMASEVVRPSDAELLKAQADIWRLSLSYLTPLSLRCAVELGIPTAIYRHGGAASAAELVT 1264
A + + P+DA+L+KAQAD+ R SL+YLT ++LRCA+ELGIPTAI R GG AS +L+
Sbjct: 14 AQSQTMTVPTDAQLIKAQADLQRHSLTYLTSMALRCAIELGIPTAIQRLGGTASLPDLMA 193
Query: 1263 ALSLPSAKLPF 1231
ALSLP K PF
Sbjct: 194 ALSLPPPKAPF 226
Score = 79.0 bits (166), Expect(4) = 2e-058
Identities = 34/66 (51%), Positives = 42/66 (63%)
Frame = -1 / +2
Query: 1008 VTSPFEELHGATLFHESMGSLDADFHDMASEALDAHDNFGIEIAMREFRDLFEGIQSMTY 829
V SPFE +H A F ESM LD + + EAL AHD+ GI +RE R LF+G+QS+T
Sbjct: 446 VPSPFEHVHAAAPFDESMTLLDPETDKLFYEALAAHDHMGIGTVLRECRGLFDGLQSLTD 625
Query: 828 CCGNFG 811
CCG G
Sbjct: 626 CCGGDG 643
Score = 76.2 bits (160), Expect(4) = 4e-038
Identities = 40/74 (54%), Positives = 43/74 (58%)
Frame = +2 / -2
Query: 1199 DAAXXXXXXXXNGSLAEGRDSAVTSSAAEAAPPWR*IAVGMPSSTAHLSDRGVR*ERLSR 1378
D A NG+L G DSA S +A PP R IAVGMPSS AHLS VR* RL R
Sbjct: 258 DLASSRRTRLRNGALGGGSDSAAIRSGKDAVPPRRWIAVGMPSSMAHLSAMDVR*VRLWR 79
Query: 1379 HMSACAFSSSASLG 1420
SACA S AS+G
Sbjct: 78 CRSACALISWASVG 37
Score = 70.7 bits (148), Expect(3) = 2e-022
Identities = 36/70 (51%), Positives = 45/70 (64%)
Frame = +1 / -1
Query: 1204 GEEPQQAAEERQLSGGERQRRDQLSG*GSPAMAVDRRRDAKLHGAPQ*QGREVGEAEPPY 1383
G++PQ AAE+R+ +RQR Q+ A A+DRRRDA+L GAP+ GREVGEA
Sbjct: 253 GQQPQDAAEKRRFGWRKRQRGHQVGQGRGAAEALDRRRDAELDGAPECHGREVGEAVALQ 74
Query: 1384 VGLCL**LGV 1413
V L L LGV
Sbjct: 73 VSLRLDQLGV 44
Score = 57.4 bits (119), Expect(4) = 2e-058
Identities = 22/53 (41%), Positives = 33/53 (62%)
Frame = -1 / +2
Query: 1170 TEEERYRISPVSYLLVDGIPHEDHMNHTALVLTCTSTRYIEAGIGLAEWFKRD 1012
TE Y ++P+SY+LVDG+ + L TS ++E+G+GLA+WFK D
Sbjct: 275 TEAGIYSLTPLSYILVDGVLIDGEARQVTFPLAVTSRYHMESGLGLADWFKND 433
Score = 57.0 bits (118), Expect(4) = 4e-038
Identities = 31/71 (43%), Positives = 39/71 (54%)
Frame = +2 / -2
Query: 812 PKLPQQ*VMDWIPSNKSLNSRIAISMPKLSWASKASLAMSWKSASRLPMLSWNRVAPCSS 991
P PQQ V D PSN+ +SR + +P SWA++AS S S MLS A C+
Sbjct: 642 PSPPQQSVSDCRPSNRPRHSRSTVPIPIWSWAARAS*NSLSVSGSSSVMLSSKGAAACTC 463
Query: 992 SNGDVTTSLLN 1024
SNGD T S L+
Sbjct: 462 SNGDGTGSKLS 430
Score = 50.1 bits (103), Expect(3) = 2e-022
Identities = 25/58 (43%), Positives = 32/58 (55%)
Frame = +1 / -1
Query: 823 AAVGHGLDPLEQVPELPHSYLDAEVVVGVQGLARHVVEICVEAPHALVEQSRPVQLLE 996
AAVG L +EQ P D +V+G QGL +V + VE HALVE R V +L+
Sbjct: 631 AAVGE*LQAIEQATAFPQHRADPHMVMGGQGLVEQLVGLRVEQRHALVEGRRRVHMLK 458
Score = 49.2 bits (101), Expect(4) = 2e-058
Identities = 19/25 (76%), Positives = 20/25 (80%)
Frame = -1 / +2
Query: 813 GDDKGARAIVKAFPHIKCTVLAPPK 739
GD ARAIVKAFPHIKC V+ PPK
Sbjct: 635 GDGTTARAIVKAFPHIKCNVVGPPK 709
Score = 45.1 bits (92), Expect(4) = 4e-038
Identities = 17/26 (65%), Positives = 22/26 (84%)
Frame = +2 / -2
Query: 737 ILGGASTVHFMCGKALTMALAPLSSP 814
+LGG +T+H +CGKALTMALA + SP
Sbjct: 711 LLGGPTTLHLICGKALTMALAVVPSP 634
Score = 36.8 bits (74), Expect(4) = 4e-038
Identities = 21/45 (46%), Positives = 24/45 (53%)
Frame = +2 / -2
Query: 1013 SLLNHSASPIPASM*RVEVQVSTRAVWFMWSS*GMPSTRR*DTGL 1147
S LN SA P P SM* EV S + S PSTR *D+G+
Sbjct: 432 SFLNQSARPRPDSM*YREVTASGKVTCLASPSMSTPSTRM*DSGV 298
Score = 29.0 bits (57), Expect(3) = 2e-022
Identities = 12/25 (48%), Positives = 12/25 (48%)
Frame = +3 / -3
Query: 741 WEGPAQCILCVGRL*QWPWHPCHHR 815
WE P C R *QWP HHR
Sbjct: 707 WEVPPHCT*YAERP*QWPLPWSHHR 633
>gb|BF259028.2|BF259028 HVSMEf0017H05f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEf0017H05f, mRNA sequence
Length = 791
Score = 98.7 bits (209), Expect(4) = 7e-057
Identities = 42/71 (59%), Positives = 54/71 (76%)
Frame = -1 / +2
Query: 1443 AMASEVVRPSDAELLKAQADIWRLSLSYLTPLSLRCAVELGIPTAIYRHGGAASAAELVT 1264
A + + P+DA+L+KAQAD+ R SL+YLT ++LRCA+ELGIPTAI R GG AS +L+
Sbjct: 35 AQSQTMTVPTDAQLIKAQADLQRHSLTYLTSMALRCAIELGIPTAIQRLGGTASLPDLMA 214
Query: 1263 ALSLPSAKLPF 1231
ALSLP K PF
Sbjct: 215 ALSLPPPKAPF 247
Score = 79.9 bits (168), Expect(4) = 7e-057
Identities = 34/66 (51%), Positives = 42/66 (63%)
Frame = -1 / +2
Query: 1008 VTSPFEELHGATLFHESMGSLDADFHDMASEALDAHDNFGIEIAMREFRDLFEGIQSMTY 829
V SPFE +H A F ESM LD + + EAL AHD+ GI +RE R LF+G+QS+T
Sbjct: 467 VPSPFEHVHAAAPFDESMTLLDPETDKLVYEALAAHDHMGIGTVLRECRGLFDGLQSLTD 646
Query: 828 CCGNFG 811
CCG G
Sbjct: 647 CCGGDG 664
Score = 76.2 bits (160), Expect(4) = 4e-036
Identities = 40/74 (54%), Positives = 43/74 (58%)
Frame = +2 / -3
Query: 1199 DAAXXXXXXXXNGSLAEGRDSAVTSSAAEAAPPWR*IAVGMPSSTAHLSDRGVR*ERLSR 1378
D A NG+L G DSA S +A PP R IAVGMPSS AHLS VR* RL R
Sbjct: 279 DLASSRRTRLRNGALGGGSDSAAIRSGKDAVPPRRWIAVGMPSSMAHLSAMDVR*VRLWR 100
Query: 1379 HMSACAFSSSASLG 1420
SACA S AS+G
Sbjct: 99 CRSACALISWASVG 58
Score = 70.7 bits (148), Expect(3) = 5e-022
Identities = 36/70 (51%), Positives = 45/70 (64%)
Frame = +1 / -2
Query: 1204 GEEPQQAAEERQLSGGERQRRDQLSG*GSPAMAVDRRRDAKLHGAPQ*QGREVGEAEPPY 1383
G++PQ AAE+R+ +RQR Q+ A A+DRRRDA+L GAP+ GREVGEA
Sbjct: 274 GQQPQDAAEKRRFGWRKRQRGHQVGQGRGAAEALDRRRDAELDGAPECHGREVGEAVALQ 95
Query: 1384 VGLCL**LGV 1413
V L L LGV
Sbjct: 94 VSLRLDQLGV 65
Score = 57.9 bits (120), Expect(4) = 4e-036
Identities = 31/71 (43%), Positives = 39/71 (54%)
Frame = +2 / -3
Query: 812 PKLPQQ*VMDWIPSNKSLNSRIAISMPKLSWASKASLAMSWKSASRLPMLSWNRVAPCSS 991
P PQQ V D PSN+ +SR + +P SWA++AS S S MLS A C+
Sbjct: 663 PSPPQQSVSDCRPSNRPRHSRSTVPIPIWSWAARAS*TSLSVSGSSSVMLSSKGAAACTC 484
Query: 992 SNGDVTTSLLN 1024
SNGD T S L+
Sbjct: 483 SNGDGTGSKLS 451
Score = 57.4 bits (119), Expect(4) = 7e-057
Identities = 22/53 (41%), Positives = 33/53 (62%)
Frame = -1 / +2
Query: 1170 TEEERYRISPVSYLLVDGIPHEDHMNHTALVLTCTSTRYIEAGIGLAEWFKRD 1012
TE Y ++P+SY+LVDG+ + L TS ++E+G+GLA+WFK D
Sbjct: 296 TEAGIYSLTPLSYILVDGVLIDGEARQVTFPLAVTSRYHMESGLGLADWFKND 454
Score = 49.2 bits (101), Expect(3) = 5e-022
Identities = 25/58 (43%), Positives = 32/58 (55%)
Frame = +1 / -2
Query: 823 AAVGHGLDPLEQVPELPHSYLDAEVVVGVQGLARHVVEICVEAPHALVEQSRPVQLLE 996
AAVG L +EQ P D +V+G QGL +V + VE HALVE R V +L+
Sbjct: 652 AAVGE*LQAIEQATAFPQHRADPHMVMGGQGLVDQLVGLRVEQRHALVEGRRRVHMLK 479
Score = 42.8 bits (87), Expect(4) = 7e-057
Identities = 17/25 (68%), Positives = 18/25 (72%)
Frame = -1 / +2
Query: 813 GDDKGARAIVKAFPHIKCTVLAPPK 739
GD +AIVKAFPHIKC VL PK
Sbjct: 656 GDGTTGKAIVKAFPHIKCNVLGLPK 730
Score = 37.3 bits (75), Expect(4) = 4e-036
Identities = 14/24 (58%), Positives = 18/24 (75%)
Frame = +2 / -3
Query: 743 GGASTVHFMCGKALTMALAPLSSP 814
G +T+H +CGKALTMAL + SP
Sbjct: 726 GSPNTLHLICGKALTMALPVVPSP 655
Score = 36.8 bits (74), Expect(4) = 4e-036
Identities = 21/45 (46%), Positives = 24/45 (53%)
Frame = +2 / -3
Query: 1013 SLLNHSASPIPASM*RVEVQVSTRAVWFMWSS*GMPSTRR*DTGL 1147
S LN SA P P SM* EV S + S PSTR *D+G+
Sbjct: 453 SFLNQSARPRPDSM*YREVTASGKVTCLASPSMSTPSTRM*DSGV 319
Score = 28.6 bits (56), Expect(3) = 5e-022
Identities = 11/24 (45%), Positives = 12/24 (50%)
Frame = +3 / -1
Query: 744 EGPAQCILCVGRL*QWPWHPCHHR 815
E P C GR *+WP HHR
Sbjct: 725 EVPTHCT*YAGRP*RWPCRSSHHR 654
>gb|BF631324.2|BF631324 HVSMEb0015J20f Hordeum vulgare seedling shoot EST library HVcDNA0002
(Dehydration stress) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEb0015J20f, mRNA sequence
Length = 832
Score = 98.7 bits (209), Expect(4) = 6e-055
Identities = 42/71 (59%), Positives = 54/71 (76%)
Frame = -1 / +2
Query: 1443 AMASEVVRPSDAELLKAQADIWRLSLSYLTPLSLRCAVELGIPTAIYRHGGAASAAELVT 1264
A + + P+DA+L+KAQAD+ R SL+YLT ++LRCA+ELGIPTAI R GG AS +L+
Sbjct: 17 AQSQTMTVPTDAQLIKAQADLQRHSLTYLTSMALRCAIELGIPTAIQRLGGTASLPDLMA 196
Query: 1263 ALSLPSAKLPF 1231
ALSLP K PF
Sbjct: 197 ALSLPPPKAPF 229
Score = 76.2 bits (160), Expect(4) = 2e-034
Identities = 40/74 (54%), Positives = 43/74 (58%)
Frame = +2 / -2
Query: 1199 DAAXXXXXXXXNGSLAEGRDSAVTSSAAEAAPPWR*IAVGMPSSTAHLSDRGVR*ERLSR 1378
D A NG+L G DSA S +A PP R IAVGMPSS AHLS VR* RL R
Sbjct: 261 DLASSRRTRLRNGALGGGSDSAAIRSGKDAVPPRRWIAVGMPSSMAHLSAMDVR*VRLWR 82
Query: 1379 HMSACAFSSSASLG 1420
SACA S AS+G
Sbjct: 81 CRSACALISWASVG 40
Score = 75.8 bits (159), Expect(4) = 6e-055
Identities = 33/66 (50%), Positives = 41/66 (62%)
Frame = -1 / +2
Query: 1008 VTSPFEELHGATLFHESMGSLDADFHDMASEALDAHDNFGIEIAMREFRDLFEGIQSMTY 829
V SPFE +H A F ESM LD + + EAL AHD+ GI +RE R L +G+QS+T
Sbjct: 449 VPSPFEHVHAAAPFDESMTLLDPETDKLFYEALAAHDHMGIGTVLRECRGLXDGLQSLTD 628
Query: 828 CCGNFG 811
CCG G
Sbjct: 629 CCGGDG 646
Score = 70.7 bits (148), Expect(4) = 2e-023
Identities = 36/70 (51%), Positives = 45/70 (64%)
Frame = +1 / -1
Query: 1204 GEEPQQAAEERQLSGGERQRRDQLSG*GSPAMAVDRRRDAKLHGAPQ*QGREVGEAEPPY 1383
G++PQ AAE+R+ +RQR Q+ A A+DRRRDA+L GAP+ GREVGEA
Sbjct: 256 GQQPQDAAEKRRFGWRKRQRGHQVGQGRGAAEALDRRRDAELDGAPECHGREVGEAVALQ 77
Query: 1384 VGLCL**LGV 1413
V L L LGV
Sbjct: 76 VSLRLDQLGV 47
Score = 57.4 bits (119), Expect(4) = 6e-055
Identities = 22/53 (41%), Positives = 33/53 (62%)
Frame = -1 / +2
Query: 1170 TEEERYRISPVSYLLVDGIPHEDHMNHTALVLTCTSTRYIEAGIGLAEWFKRD 1012
TE Y ++P+SY+LVDG+ + L TS ++E+G+GLA+WFK D
Sbjct: 278 TEAGIYSLTPLSYILVDGVLIDGEARQVTFPLAVTSRYHMESGLGLADWFKND 436
Score = 53.8 bits (111), Expect(4) = 2e-034
Identities = 30/71 (42%), Positives = 38/71 (53%)
Frame = +2 / -2
Query: 812 PKLPQQ*VMDWIPSNKSLNSRIAISMPKLSWASKASLAMSWKSASRLPMLSWNRVAPCSS 991
P PQQ V D PS + +SR + +P SWA++AS S S MLS A C+
Sbjct: 645 PSPPQQSVSDCRPSXRPRHSRSTVPIPIWSWAARAS*NSLSVSGSSSVMLSSKGAAACTC 466
Query: 992 SNGDVTTSLLN 1024
SNGD T S L+
Sbjct: 465 SNGDGTGSKLS 433
Score = 47.3 bits (97), Expect(4) = 2e-023
Identities = 24/58 (41%), Positives = 31/58 (53%)
Frame = +1 / -1
Query: 823 AAVGHGLDPLEQVPELPHSYLDAEVVVGVQGLARHVVEICVEAPHALVEQSRPVQLLE 996
AAVG L + Q P D +V+G QGL +V + VE HALVE R V +L+
Sbjct: 634 AAVGE*LQAIXQATAFPQHRADPHMVMGGQGLVEQLVGLRVEQRHALVEGRRRVHMLK 461
Score = 40.5 bits (82), Expect(4) = 6e-055
Identities = 17/25 (68%), Positives = 18/25 (72%)
Frame = -1 / +2
Query: 813 GDDKGARAIVKAFPHIKCTVLAPPK 739
GD A+AI KAFPHIKC VL PK
Sbjct: 638 GDGTTAKAIDKAFPHIKCNVLDLPK 712
Score = 36.8 bits (74), Expect(4) = 2e-034
Identities = 21/45 (46%), Positives = 24/45 (53%)
Frame = +2 / -2
Query: 1013 SLLNHSASPIPASM*RVEVQVSTRAVWFMWSS*GMPSTRR*DTGL 1147
S LN SA P P SM* EV S + S PSTR *D+G+
Sbjct: 435 SFLNQSARPRPDSM*YREVTASGKVTCLASPSMSTPSTRM*DSGV 301
Score = 35.9 bits (72), Expect(4) = 2e-034
Identities = 13/24 (54%), Positives = 19/24 (79%)
Frame = +2 / -2
Query: 743 GGASTVHFMCGKALTMALAPLSSP 814
G ++T+H +CGKAL+MA A + SP
Sbjct: 708 GRSNTLHLICGKALSMAFAVVPSP 637
Score = 31.3 bits (62), Expect(4) = 2e-023
Identities = 11/23 (47%), Positives = 12/23 (52%)
Frame = +3 / -3
Query: 747 GPAQCILCVGRL*QWPWHPCHHR 815
GP C GRL +WP HHR
Sbjct: 704 GPTHCT*YAGRLCRWPLRSSHHR 636
Score = 23.1 bits (44), Expect(4) = 2e-023
Identities = 8/16 (50%), Positives = 9/16 (56%)
Frame = +1 / -2
Query: 448 ISLPSFCHGHHADVHQ 495
+S F GHHA HQ
Sbjct: 786 LSCGRFARGHHAHSHQ 739
>gb|AV925298.1|AV925298 AV925298 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp. vulgare
cDNA clone basd22j14 5', mRNA sequence
Length = 595
Score = 109 bits (232), Expect(3) = 6e-055
Identities = 45/84 (53%), Positives = 62/84 (73%)
Frame = -1 / +3
Query: 1419 PSDAELLKAQADIWRLSLSYLTPLSLRCAVELGIPTAIYRHGGAASAAELVTALSLPSAK 1240
P+DA+L++AQAD+WR SL +LT ++LRCAV+LGIPTAI+R GG S ++LVTALSLP +K
Sbjct: 9 PTDAQLIQAQADLWRHSLCHLTAMALRCAVQLGIPTAIHRLGGTTSVSDLVTALSLPQSK 188
Query: 1239 LPFXXXXXXXLAASGVFTVDRQST 1168
+P+ LA SG ++ T
Sbjct: 189 MPYLGRVLRLLATSGALASPKEGT 260
Score = 80.8 bits (170), Expect(3) = 2e-035
Identities = 43/81 (53%), Positives = 46/81 (56%)
Frame = +2 / -1
Query: 1178 LSTVNTPDAAXXXXXXXXNGSLAEGRDSAVTSSAAEAAPPWR*IAVGMPSSTAHLSDRGV 1357
L PD A G L GRD+AVT S + PP R*IAVGMPS TAHLS V
Sbjct: 250 LGDAKAPDVANNRKTRPRYGILDCGRDNAVTRSDTDVVPPSR*IAVGMPSWTAHLSAMAV 71
Query: 1358 R*ERLSRHMSACAFSSSASLG 1420
R RL RH SACA S AS+G
Sbjct: 70 RWHRLWRHRSACA*ISWASVG 8
Score = 79.4 bits (167), Expect(3) = 6e-055
Identities = 32/57 (56%), Positives = 42/57 (73%)
Frame = -1 / +3
Query: 1002 SPFEELHGATLFHESMGSLDADFHDMASEALDAHDNFGIEIAMREFRDLFEGIQSMT 832
SPFE++HGATLF ESM LD + ++ EAL AHD+ GI +RE DLF+G+QS+T
Sbjct: 420 SPFEDVHGATLFEESMALLDPESDELFHEALAAHDHLGIGTILRECHDLFKGVQSLT 590
Score = 65.7 bits (137), Expect(3) = 6e-055
Identities = 27/59 (45%), Positives = 39/59 (66%)
Frame = -1 / +3
Query: 1173 STEEERYRISPVSYLLVDGIPHEDHMNHTALVLTCTSTRYIEAGIGLAEWFKRDVVTSP 997
S +E Y + P+SYLLVDG+ + + AL+L+ TS IEA +GLA+WFK+D+ P
Sbjct: 243 SPKEGTYSLVPLSYLLVDGVFIDGEASQKALLLSTTSRYNIEAALGLADWFKKDITPPP 419
Score = 65.7 bits (137), Expect(3) = 2e-035
Identities = 32/59 (54%), Positives = 38/59 (64%)
Frame = +2 / -1
Query: 827 Q*VMDWIPSNKSLNSRIAISMPKLSWASKASLAMSWKSASRLPMLSWNRVAPCSSSNGD 1003
Q V DW P NKS +SR + +PK SWA+KAS S S SR +LS VAP +SSNGD
Sbjct: 595 QSVSDWTPLNKSWHSRNIVPIPKWSWAAKASWNNSSDSGSRRAILSSKSVAP*TSSNGD 419
Score = 41.8 bits (85), Expect(3) = 2e-035
Identities = 25/53 (47%), Positives = 29/53 (54%)
Frame = +2 / -1
Query: 986 SSSNGDVTTSLLNHSASPIPASM*RVEVQVSTRAVWFMWSS*GMPSTRR*DTG 1144
S+ +G S LN SASP ASM +EV S RA S PSTRR D+G
Sbjct: 430 SNGDGGGVMSFLNQSASPKAASMLYLEVVESKRAF*LASPSMNTPSTRRYDSG 272
>gb|BF260650.2|BF260650 HVSMEf0022J06f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEf0022J06f, mRNA sequence
Length = 727
Score = 109 bits (232), Expect(4) = 1e-054
Identities = 50/89 (56%), Positives = 61/89 (68%)
Frame = -1 / +3
Query: 1437 ASEVVRPSDAELLKAQADIWRLSLSYLTPLSLRCAVELGIPTAIYRHGGAASAAELVTAL 1258
A + P+DAELL+AQAD+WR SL YL+ ++LRCAVEL IPTAI+R GG AS +L+ AL
Sbjct: 6 AETIEVPADAELLQAQADLWRHSLYYLSSMALRCAVELEIPTAIHRLGGVASLPDLMAAL 185
Query: 1257 SLPSAKLPFXXXXXXXLAASGVFTVDRQS 1171
SLPS K+ F L SGVF D S
Sbjct: 186 SLPSVKMSFLGRVMRVLVNSGVFAADNSS 272
Score = 82.2 bits (173), Expect(4) = 3e-031
Identities = 44/87 (50%), Positives = 48/87 (55%)
Frame = +2 / -1
Query: 1178 LSTVNTPDAAXXXXXXXXNGSLAEGRDSAVTSSAAEAAPPWR*IAVGMPSSTAHLSDRGV 1357
LS TP+ L EGRDSA S +EA PP R IAVG+ SSTAH S
Sbjct: 265 LSAAKTPELTSTRMTRPRKDILTEGRDSAAIRSGSEATPPRRWIAVGISSSTAHRSAMEE 86
Query: 1358 R*ERLSRHMSACAFSSSASLGRTTSEA 1438
R* RL RH SACA SSSAS G + A
Sbjct: 85 R**RLWRHRSACACSSSASAGTSMVSA 5
Score = 63.8 bits (133), Expect(4) = 1e-054
Identities = 28/66 (42%), Positives = 37/66 (56%)
Frame = -1 / +3
Query: 1008 VTSPFEELHGATLFHESMGSLDADFHDMASEALDAHDNFGIEIAMREFRDLFEGIQSMTY 829
V SPFEE G LF E LD + + ++ L AHDN GI +RE D+F+ + S+T
Sbjct: 447 VLSPFEEKFGVPLFDEETALLDEELDSVCNQ*LAAHDNLGIATILRECGDIFKELDSLTD 626
Query: 828 CCGNFG 811
C G G
Sbjct: 627 CWGGDG 644
Score = 59.7 bits (124), Expect(4) = 1e-054
Identities = 23/50 (46%), Positives = 34/50 (68%)
Frame = -1 / +3
Query: 1161 ERYRISPVSYLLVDGIPHEDHMNHTALVLTCTSTRYIEAGIGLAEWFKRD 1012
E YR++P+S +LV G+ ++H + VL TS Y EA +GLA+WFK+D
Sbjct: 285 ELYRLTPLSRVLVHGVLADEHHSQKYFVLGVTSPHYTEAALGLADWFKKD 434
Score = 40.5 bits (82), Expect(4) = 3e-031
Identities = 23/53 (43%), Positives = 28/53 (52%)
Frame = +2 / -1
Query: 995 NGDVTTSLLNHSASPIPASM*RVEVQVSTRAVWFMWSS*GMPSTRR*DTGLMR 1153
N + S LN SASP AS+* EV T+ W SS P TR D+G+ R
Sbjct: 451 NTGSSVSFLNQSASPNAASV*CGEVTPRTKYFWLWCSSARTPCTRTRDSGVRR 293
Score = 39.6 bits (80), Expect(4) = 3e-031
Identities = 24/68 (35%), Positives = 33/68 (48%)
Frame = +2 / -1
Query: 812 PKLPQQ*VMDWIPSNKSLNSRIAISMPKLSWASKASLAMSWKSASRLPMLSWNRVAPCSS 991
P PQQ V + S +SR +++P+LSWA+ L S+S + S P S
Sbjct: 643 PSPPQQSVRESSSLKMSPHSRSMVAIPRLSWAANHWLQTESSSSSSRAVSSSKSGTPNFS 464
Query: 992 SNGDVTTS 1015
S GD T S
Sbjct: 463 SKGDNTGS 440
Score = 38.2 bits (77), Expect(4) = 1e-054
Identities = 15/26 (57%), Positives = 19/26 (73%)
Frame = -1 / +3
Query: 813 GDDKGARAIVKAFPHIKCTVLAPPKI 736
GD ARA+VKA+P IKCT + P K+
Sbjct: 636 GDGTTARALVKAYPDIKCTGVGPFKV 713
Score = 29.5 bits (58), Expect(4) = 3e-031
Identities = 14/25 (56%), Positives = 16/25 (64%)
Frame = +2 / -1
Query: 740 LGGASTVHFMCGKALTMALAPLSSP 814
L G + VH M G ALT ALA + SP
Sbjct: 709 LKGPTPVHLMSG*ALTRALAVVPSP 635
>gb|BF260951.2|BF260951 HVSMEf0023F23f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEf0023F23f, mRNA sequence
Length = 824
Score = 117 bits (251), Expect(4) = 3e-054
Identities = 51/84 (60%), Positives = 62/84 (73%)
Frame = -1 / +2
Query: 1437 ASEVVRPSDAELLKAQADIWRLSLSYLTPLSLRCAVELGIPTAIYRHGGAASAAELVTAL 1258
A +V P+DAELL+AQ+D+WR L YLTP+SLRCAV+LG+PT I+R GGA S +ELV AL
Sbjct: 65 AEKVFVPTDAELLQAQSDLWRHRLCYLTPMSLRCAVDLGVPTVIHRLGGAVSPSELVAAL 244
Query: 1257 SLPSAKLPFXXXXXXXLAASGVFT 1186
SLP+ KLPF L GVFT
Sbjct: 245 SLPAFKLPFLARLLRQLGTEGVFT 316
Score = 91.3 bits (193), Expect(4) = 9e-035
Identities = 46/90 (51%), Positives = 51/90 (56%)
Frame = +2 / -3
Query: 1169 VLCLSTVNTPDAAXXXXXXXXNGSLAEGRDSAVTSSAAEAAPPWR*IAVGMPSSTAHLSD 1348
VL V TP NGSL GRD A TSS + APP R + VG P STA SD
Sbjct: 333 VLASVKVKTPSVPSWRSRRARNGSLNAGRDRAATSSDGDTAPPRRWMTVGTPRSTAQRSD 154
Query: 1349 RGVR*ERLSRHMSACAFSSSASLGRTTSEA 1438
GVR*+ L RH S CA+SSSAS+G T A
Sbjct: 153 MGVR*QSLWRHRSDCAWSSSASVGTNTFSA 64
Score = 60.2 bits (125), Expect(4) = 3e-054
Identities = 23/53 (43%), Positives = 35/53 (66%)
Frame = -1 / +2
Query: 1170 TEEERYRISPVSYLLVDGIPHEDHMNHTALVLTCTSTRYIEAGIGLAEWFKRD 1012
T+ YR++P+ YLLVDG+ + + TA+V Y+EA +GLA+WFK+D
Sbjct: 320 TDARTYRLNPL*YLLVDGVRMDGDASQTAIVRAAD*RYYVEAAMGLADWFKKD 478
Score = 55.6 bits (115), Expect(4) = 3e-054
Identities = 24/66 (36%), Positives = 39/66 (59%)
Frame = -1 / +2
Query: 1008 VTSPFEELHGATLFHESMGSLDADFHDMASEALDAHDNFGIEIAMREFRDLFEGIQSMTY 829
V S E++H A +F ESM L+ + + +A AHD+ I +R+ R+L +G++S+T
Sbjct: 491 VPSAVEDVHRAPIFEESMALLEPEMDQVIHDADAAHDHMEIGPVLRQCRELVQGLESLTD 670
Query: 828 CCGNFG 811
C G G
Sbjct: 671 CGGGDG 688
Score = 40.5 bits (82), Expect(4) = 9e-035
Identities = 20/59 (33%), Positives = 32/59 (54%)
Frame = +1 / -2
Query: 820 TAAVGHGLDPLEQVPELPHSYLDAEVVVGVQGLARHVVEICVEAPHALVEQSRPVQLLE 996
T AVG L PL+++ L D VVVG G+ +V + ++ HAL++ V +L+
Sbjct: 679 TPAVGERLKPLDKLTALAEHGADLHVVVGSIGVVDDLVHLRLQERHALLKDGGAVHVLD 503
Score = 36.8 bits (74), Expect(4) = 9e-035
Identities = 24/53 (45%), Positives = 27/53 (50%)
Frame = +2 / -3
Query: 1013 SLLNHSASPIPASM*RVEVQVSTRAVWFMWSS*GMPSTRR*DTGLMRYRSSSV 1171
S LN SA P+ AS * T AVW S PST R +GL RY +SV
Sbjct: 477 SFLNQSARPMAAST**R*SAARTMAVWLASPSMRTPSTSRY*SGLRRYVLASV 319
Score = 36.3 bits (73), Expect(4) = 3e-054
Identities = 15/21 (71%), Positives = 15/21 (71%)
Frame = -1 / +2
Query: 813 GDDKGARAIVKAFPHIKCTVL 751
GD AR I KAFPHI CTVL
Sbjct: 680 GDGATARFIEKAFPHINCTVL 742
Score = 35.0 bits (70), Expect(4) = 9e-035
Identities = 15/25 (60%), Positives = 17/25 (68%)
Frame = +2 / -3
Query: 740 LGGASTVHFMCGKALTMALAPLSSP 814
L +STV FMCGKA +M LA SP
Sbjct: 753 LRSSSTVQFMCGKAFSMNLAVAPSP 679
>gb|AV913354.1|AV913354 AV913354 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags21m09 5', mRNA sequence
Length = 630
Score = 110 bits (234), Expect(3) = 7e-054
Identities = 47/92 (51%), Positives = 65/92 (70%)
Frame = -1 / +3
Query: 1443 AMASEVVRPSDAELLKAQADIWRLSLSYLTPLSLRCAVELGIPTAIYRHGGAASAAELVT 1264
A A + P+DA+L++AQAD+WR SL +L ++LRCAV+LGIPTAI+R GG S ++LVT
Sbjct: 45 AQAPTMAVPTDAQLIQAQADLWRHSLCHLRAIALRCAVQLGIPTAIHRLGGTTSVSDLVT 224
Query: 1263 ALSLPSAKLPFXXXXXXXLAASGVFTVDRQST 1168
ALSLP +K+P+ LAASG ++ T
Sbjct: 225 ALSLPQSKMPYLGRVLRLLAASGALASPKEGT 320
Score = 81.3 bits (171), Expect(3) = 4e-035
Identities = 43/81 (53%), Positives = 47/81 (58%)
Frame = +2 / -3
Query: 1178 LSTVNTPDAAXXXXXXXXNGSLAEGRDSAVTSSAAEAAPPWR*IAVGMPSSTAHLSDRGV 1357
L PDAA G L GRD+AVT S E PP R*IAVGMPS TAHLS +
Sbjct: 310 LGDAKAPDAANNRKTRPRYGILDCGRDNAVTRSDTEVVPPSR*IAVGMPSWTAHLSAMAL 131
Query: 1358 R*ERLSRHMSACAFSSSASLG 1420
R +L RH SACA S AS+G
Sbjct: 130 RWHKLWRHRSACA*ISWASVG 68
Score = 73.0 bits (153), Expect(3) = 7e-054
Identities = 29/59 (49%), Positives = 40/59 (67%)
Frame = -1 / +3
Query: 1173 STEEERYRISPVSYLLVDGIPHEDHMNHTALVLTCTSTRYIEAGIGLAEWFKRDVVTSP 997
S +E Y + P+SYLLVDG+ + + A+VLT TS YIEA +GLA+WFK+D+ P
Sbjct: 303 SPKEGTYSLVPLSYLLVDGVFIDGEASQKAIVLTTTSRHYIEAALGLADWFKKDIAPPP 479
Score = 67.5 bits (141), Expect(3) = 7e-054
Identities = 29/50 (58%), Positives = 34/50 (68%)
Frame = -1 / +3
Query: 1002 SPFEELHGATLFHESMGSLDADFHDMASEALDAHDNFGIEIAMREFRDLF 853
SPFE++HGATLF ESM LD + M EAL AHD+ GI +RE DLF
Sbjct: 480 SPFEDVHGATLFEESMALLDPESDKMFHEALAAHDHLGIGTILRECHDLF 629
Score = 53.3 bits (110), Expect(3) = 4e-035
Identities = 28/53 (52%), Positives = 32/53 (60%)
Frame = +2 / -3
Query: 986 SSSNGDVTTSLLNHSASPIPASM*RVEVQVSTRAVWFMWSS*GMPSTRR*DTG 1144
S+ +G S LN SASP ASM* +EV VST A W S PSTRR D+G
Sbjct: 490 SNGDGGGAMSFLNQSASPKAASM*CLEVVVSTMAFWLASPSMNTPSTRRYDSG 332
Score = 52.8 bits (109), Expect(3) = 4e-035
Identities = 26/50 (52%), Positives = 33/50 (66%)
Frame = +2 / -3
Query: 854 NKSLNSRIAISMPKLSWASKASLAMSWKSASRLPMLSWNRVAPCSSSNGD 1003
NKS +SR + +PK SWA+KAS + S SR +LS VAP +SSNGD
Sbjct: 628 NKSWHSRNIVPIPKWSWAAKASWNILSDSGSRSAILSSKSVAP*TSSNGD 479
>gb|BF620185.2|BF620185 HVSMEc0018M19f Hordeum vulgare seedling shoot EST library HVcDNA0003
(Etiolated and unstressed) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEc0018M19f, mRNA sequence
Length = 601
Score = 112 bits (240), Expect(3) = 7e-054
Identities = 48/92 (52%), Positives = 66/92 (71%)
Frame = -1 / +1
Query: 1443 AMASEVVRPSDAELLKAQADIWRLSLSYLTPLSLRCAVELGIPTAIYRHGGAASAAELVT 1264
A A + P+DA+L++AQAD+WR SL +LT ++LRCAV+LGIPTAI+R GG S ++LVT
Sbjct: 16 AQAPTMAVPTDAQLIQAQADLWRHSLCHLTAIALRCAVQLGIPTAIHRLGGTTSVSDLVT 195
Query: 1263 ALSLPSAKLPFXXXXXXXLAASGVFTVDRQST 1168
ALSLP +K+P+ LAASG ++ T
Sbjct: 196 ALSLPQSKMPYLGRVLRLLAASGALASPKEGT 291
Score = 82.6 bits (174), Expect(3) = 1e-035
Identities = 44/81 (54%), Positives = 47/81 (58%)
Frame = +2 / -3
Query: 1178 LSTVNTPDAAXXXXXXXXNGSLAEGRDSAVTSSAAEAAPPWR*IAVGMPSSTAHLSDRGV 1357
L PDAA G L GRD+AVT S E PP R*IAVGMPS TAHLS V
Sbjct: 281 LGDAKAPDAANNRKTRPRYGILDCGRDNAVTRSDTEVVPPSR*IAVGMPSWTAHLSAMAV 102
Query: 1358 R*ERLSRHMSACAFSSSASLG 1420
R +L RH SACA S AS+G
Sbjct: 101 RWHKLWRHRSACA*ISWASVG 39
Score = 73.0 bits (153), Expect(3) = 7e-054
Identities = 29/59 (49%), Positives = 40/59 (67%)
Frame = -1 / +1
Query: 1173 STEEERYRISPVSYLLVDGIPHEDHMNHTALVLTCTSTRYIEAGIGLAEWFKRDVVTSP 997
S +E Y + P+SYLLVDG+ + + A+VLT TS YIEA +GLA+WFK+D+ P
Sbjct: 274 SPKEGTYSLVPLSYLLVDGVFIDGEASQKAIVLTTTSRHYIEAALGLADWFKKDIAPPP 450
Score = 64.8 bits (135), Expect(3) = 7e-054
Identities = 28/49 (57%), Positives = 33/49 (67%)
Frame = -1 / +1
Query: 1002 SPFEELHGATLFHESMGSLDADFHDMASEALDAHDNFGIEIAMREFRDL 856
SPFE++HGATLF ESM LD + M EAL AHD+ GI +RE DL
Sbjct: 451 SPFEDVHGATLFEESMALLDPESDKMFHEALAAHDHLGIGTILRECHDL 597
Score = 53.3 bits (110), Expect(3) = 1e-035
Identities = 28/53 (52%), Positives = 32/53 (60%)
Frame = +2 / -3
Query: 986 SSSNGDVTTSLLNHSASPIPASM*RVEVQVSTRAVWFMWSS*GMPSTRR*DTG 1144
S+ +G S LN SASP ASM* +EV VST A W S PSTRR D+G
Sbjct: 461 SNGDGGGAMSFLNQSASPKAASM*CLEVVVSTMAFWLASPSMNTPSTRRYDSG 303
Score = 52.8 bits (109), Expect(3) = 1e-035
Identities = 26/50 (52%), Positives = 33/50 (66%)
Frame = +2 / -3
Query: 854 NKSLNSRIAISMPKLSWASKASLAMSWKSASRLPMLSWNRVAPCSSSNGD 1003
NKS +SR + +PK SWA+KAS + S SR +LS VAP +SSNGD
Sbjct: 599 NKSWHSRNIVPIPKWSWAAKASWNILSDSGSRSAILSSKSVAP*TSSNGD 450
>gb|BJ463887.1|BJ463887 BJ463887 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags30o16 5', mRNA sequence
Length = 706
Score = 79.0 bits (166), Expect(4) = 1e-053
Identities = 31/66 (46%), Positives = 44/66 (66%)
Frame = -1 / +1
Query: 1008 VTSPFEELHGATLFHESMGSLDADFHDMASEALDAHDNFGIEIAMREFRDLFEGIQSMTY 829
V S FE++H A+LF ES +LD + + ++ L AHDN GI +RE DLF+G++S+T
Sbjct: 400 VPSVFEDVHSASLFDESTAALDPELDALVTDGLAAHDNLGIGTIIRECHDLFKGLESLTD 579
Query: 828 CCGNFG 811
CCG G
Sbjct: 580 CCGGDG 597
Score = 75.3 bits (158), Expect(4) = 1e-053
Identities = 33/61 (54%), Positives = 42/61 (68%)
Frame = -1 / +1
Query: 1371 SLSYLTPLSLRCAVELGIPTAIYRHGGAASAAELVTALSLPSAKLPFXXXXXXXLAASGV 1192
+L YLT + LRCAV+LGIPTAI+ GG +S A+L ALS+P++K PF L SGV
Sbjct: 25 TLYYLTSMGLRCAVKLGIPTAIHNLGGVSSLADLAAALSIPASKQPFLGRLMRALVTSGV 204
Query: 1191 F 1189
F
Sbjct: 205 F 207
Score = 62.9 bits (131), Expect(4) = 1e-053
Identities = 22/50 (44%), Positives = 37/50 (74%)
Frame = -1 / +1
Query: 1161 ERYRISPVSYLLVDGIPHEDHMNHTALVLTCTSTRYIEAGIGLAEWFKRD 1012
E + ++P+S +LVDG+ ++H + T+ VL TS Y+EA +G+A+WFK+D
Sbjct: 238 ELFGLNPLSRILVDGVVADEHHSQTSFVLAGTSRHYMEAALGMADWFKKD 387
Score = 62.0 bits (129), Expect(4) = 1e-037
Identities = 31/59 (52%), Positives = 38/59 (64%)
Frame = +1 / -2
Query: 1186 GEHARRGEEPQQAAEERQLSGGERQRRDQLSG*GSPAMAVDRRRDAKLHGAPQ*QGREV 1362
GE A + QAA+ER L+ G+ QR Q+S G PA VDRRRDA+L GA + GREV
Sbjct: 210 GEDA*GDQRAHQAAKERLLACGDGQRGRQVSQRGDPAEVVDRRRDAELDGAAEPHGREV 34
Score = 60.2 bits (125), Expect(4) = 1e-037
Identities = 28/66 (42%), Positives = 41/66 (62%)
Frame = +2 / -3
Query: 812 PKLPQQ*VMDWIPSNKSLNSRIAISMPKLSWASKASLAMSWKSASRLPMLSWNRVAPCSS 991
P PQQ V D P +S +SR+ + +P+LSWA++ S+ + S S+ +LS R A C+S
Sbjct: 596 PSPPQQSVRDSRPLKRSWHSRMMVPIPRLSWAARPSVTSASSSGSKAAVLSSKRDALCTS 417
Query: 992 SNGDVT 1009
SN D T
Sbjct: 416 SNTDGT 399
Score = 50.6 bits (104), Expect(4) = 1e-053
Identities = 22/34 (64%), Positives = 23/34 (67%)
Frame = -1 / +1
Query: 813 GDDKGARAIVKAFPHIKCTVLAPPKIIATKPADG 712
GD ARAI KA PHIKCTVL PK+I ADG
Sbjct: 589 GDGTTARAITKAHPHIKCTVLDLPKVIDKTSADG 690
Score = 47.3 bits (97), Expect(4) = 1e-037
Identities = 20/34 (58%), Positives = 26/34 (76%)
Frame = +2 / -3
Query: 713 PSAGLVAMILGGASTVHFMCGKALTMALAPLSSP 814
PSA ++++ LG +STVH MCG AL MALA + SP
Sbjct: 689 PSAEVLSITLGRSSTVHLMCGWALVMALAVVPSP 588
Score = 43.7 bits (89), Expect(4) = 1e-037
Identities = 23/44 (52%), Positives = 26/44 (59%)
Frame = +2 / -3
Query: 1013 SLLNHSASPIPASM*RVEVQVSTRAVWFMWSS*GMPSTRR*DTG 1144
S LN SA P ASM* +V ST+ VW SS PSTR D+G
Sbjct: 386 SFLNQSAMPSAASM*CRDVPASTKDVWLWCSSATTPSTRMRDSG 255
>gb|BG309181.2|BG309181 HVSMEc0004K06f Hordeum vulgare seedling shoot EST library HVcDNA0003
(Etiolated and unstressed) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEc0004K06f, mRNA sequence
Length = 826
Score = 110 bits (234), Expect(5) = 2e-053
Identities = 47/92 (51%), Positives = 65/92 (70%)
Frame = -1 / +1
Query: 1443 AMASEVVRPSDAELLKAQADIWRLSLSYLTPLSLRCAVELGIPTAIYRHGGAASAAELVT 1264
A A + P+DA+L++AQAD+WR SL +L ++LRCAV+LGIPTAI+R GG S ++LVT
Sbjct: 4 AQAPTMAVPTDAQLIQAQADLWRHSLCHLRAIALRCAVQLGIPTAIHRLGGTTSVSDLVT 183
Query: 1263 ALSLPSAKLPFXXXXXXXLAASGVFTVDRQST 1168
ALSLP +K+P+ LAASG ++ T
Sbjct: 184 ALSLPQSKMPYLGRVLRLLAASGALASPKEGT 279
Score = 81.3 bits (171), Expect(5) = 3e-034
Identities = 43/81 (53%), Positives = 47/81 (58%)
Frame = +2 / -3
Query: 1178 LSTVNTPDAAXXXXXXXXNGSLAEGRDSAVTSSAAEAAPPWR*IAVGMPSSTAHLSDRGV 1357
L PDAA G L GRD+AVT S E PP R*IAVGMPS TAHLS +
Sbjct: 269 LGDAKAPDAANNRKTRPRYGILDCGRDNAVTRSDTEVVPPSR*IAVGMPSWTAHLSAMAL 90
Query: 1358 R*ERLSRHMSACAFSSSASLG 1420
R +L RH SACA S AS+G
Sbjct: 89 RWHKLWRHRSACA*ISWASVG 27
Score = 73.0 bits (153), Expect(5) = 2e-053
Identities = 29/59 (49%), Positives = 40/59 (67%)
Frame = -1 / +1
Query: 1173 STEEERYRISPVSYLLVDGIPHEDHMNHTALVLTCTSTRYIEAGIGLAEWFKRDVVTSP 997
S +E Y + P+SYLLVDG+ + + A+VLT TS YIEA +GLA+WFK+D+ P
Sbjct: 262 SPKEGTYSLVPLSYLLVDGVFIDGEASQKAIVLTTTSRHYIEAALGLADWFKKDIAPPP 438
Score = 53.3 bits (110), Expect(5) = 3e-034
Identities = 28/53 (52%), Positives = 32/53 (60%)
Frame = +2 / -3
Query: 986 SSSNGDVTTSLLNHSASPIPASM*RVEVQVSTRAVWFMWSS*GMPSTRR*DTG 1144
S+ +G S LN SASP ASM* +EV VST A W S PSTRR D+G
Sbjct: 449 SNGDGGGAMSFLNQSASPKAASM*CLEVVVSTMAFWLASPSMNTPSTRRYDSG 291
Score = 35.9 bits (72), Expect(5) = 2e-053
Identities = 19/50 (38%), Positives = 23/50 (46%)
Frame = -1 / +2
Query: 960 SMGSLDADFHDMASEALDAHDNFGIEIAMREFRDLFEGIQSMTYCCGNFG 811
SM LD M EAL AHD+ G +R DL +G + CG G
Sbjct: 482 SMALLDPKSDRMFHEALAAHDHLGKGTILRGCHDLLKGSSHLPDWCGGDG 631
Score = 34.5 bits (69), Expect(5) = 2e-053
Identities = 12/18 (66%), Positives = 15/18 (83%)
Frame = -1 / +1
Query: 1002 SPFEELHGATLFHESMGS 949
SPFE++HGATLF E G+
Sbjct: 439 SPFEDVHGATLFEEKYGA 492
Score = 32.2 bits (64), Expect(5) = 3e-034
Identities = 13/24 (54%), Positives = 16/24 (66%)
Frame = +2 / -2
Query: 848 PSNKSLNSRIAISMPKLSWASKAS 919
P NKS + R + PK SWA+KAS
Sbjct: 594 PFNKSWHPRNIVPFPKWSWAAKAS 523
Score = 31.3 bits (62), Expect(5) = 2e-053
Identities = 11/15 (73%), Positives = 12/15 (80%)
Frame = -1 / +3
Query: 783 KAFPHIKCTVLAPPK 739
KAFPHIKC VL P +
Sbjct: 654 KAFPHIKCNVLDPSR 698
Score = 29.0 bits (57), Expect(5) = 3e-034
Identities = 9/13 (69%), Positives = 13/13 (100%)
Frame = +2 / -1
Query: 746 GASTVHFMCGKAL 784
G++T+HF+CGKAL
Sbjct: 691 GSNTLHFICGKAL 653
Score = 23.1 bits (44), Expect(5) = 3e-034
Identities = 10/17 (58%), Positives = 11/17 (64%)
Frame = +2 / -3
Query: 953 PMLSWNRVAPCSSSNGD 1003
P S VAP +SSNGD
Sbjct: 488 PYFSSKSVAP*TSSNGD 438
>gb|BF260804.2|BF260804 HVSMEf0022P20f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEf0022P20f, mRNA sequence
Length = 729
Score = 112 bits (239), Expect(5) = 2e-053
Identities = 50/91 (54%), Positives = 62/91 (68%)
Frame = -1 / +2
Query: 1443 AMASEVVRPSDAELLKAQADIWRLSLSYLTPLSLRCAVELGIPTAIYRHGGAASAAELVT 1264
A A + P+DAELL+AQAD+WR SL YL+ + LRCAV+L IPT I+R GG A A+L+
Sbjct: 35 AQADTIEVPTDAELLQAQADLWRHSLYYLSSMGLRCAVQLQIPTTIHRLGGVALLADLMA 214
Query: 1263 ALSLPSAKLPFXXXXXXXLAASGVFTVDRQS 1171
ALSLPS K+PF L SGVF D+ S
Sbjct: 215 ALSLPSVKMPFLHRLMRVLVTSGVFAADKDS 307
Score = 76.2 bits (160), Expect(5) = 9e-032
Identities = 41/91 (45%), Positives = 50/91 (54%)
Frame = +2 / -1
Query: 1178 LSTVNTPDAAXXXXXXXXNGSLAEGRDSAVTSSAAEAAPPWR*IAVGMPSSTAHLSDRGV 1357
LS TPD NG +GRD+A SA++A PP R + VG+ S TA S
Sbjct: 300 LSAAKTPDVTSTRMSRWRNGIFTDGRDNAAIRSASKATPPRRWMVVGI*SWTAQRSPMED 121
Query: 1358 R*ERLSRHMSACAFSSSASLGRTTSEAIARV 1450
R* RL RH SACA SSSAS+G + A A +
Sbjct: 120 R**RLWRHRSACACSSSASVGTSMVSA*AAI 28
Score = 71.6 bits (150), Expect(5) = 2e-053
Identities = 28/59 (47%), Positives = 41/59 (69%)
Frame = -1 / +2
Query: 1008 VTSPFEELHGATLFHESMGSLDADFHDMASEALDAHDNFGIEIAMREFRDLFEGIQSMT 832
V SPFE++HGA +F E +D +F +A+E L AHDN GI +RE D+F+G++S+T
Sbjct: 479 VPSPFEDMHGAPVFDERTPLMDEEFDAVANEGLAAHDNLGIGTILRECGDIFKGLESLT 655
Score = 52.8 bits (109), Expect(5) = 9e-032
Identities = 27/59 (45%), Positives = 34/59 (57%)
Frame = +2 / -1
Query: 833 VMDWIPSNKSLNSRIAISMPKLSWASKASLAMSWKSASRLPMLSWNRVAPCSSSNGDVT 1009
V D P S +SR + +PKLSWA+ SLA + S+S +LS APC SS GD T
Sbjct: 654 VRDSSPLKMSPHSRNMVPIPKLSWAANPSLATASNSSSMRGVLSSKTGAPCMSSKGDGT 478
Score = 37.3 bits (75), Expect(5) = 2e-053
Identities = 13/33 (39%), Positives = 21/33 (63%)
Frame = -1 / +2
Query: 1107 EDHMNHTALVLTCTSTRYIEAGIGLAEWFKRDV 1009
++H + VL T+ EA +GLA+WFK+D+
Sbjct: 371 DEHHSQKYFVLAVTAPHCAEAALGLADWFKKDL 469
Score = 32.7 bits (65), Expect(5) = 9e-032
Identities = 13/22 (59%), Positives = 15/22 (68%)
Frame = +1 / -3
Query: 1018 LEPLRQPYPRLDVARRGAGEHQ 1083
LEP+RQP L RRG GEH+
Sbjct: 460 LEPVRQPQRSLCAMRRGHGEHE 395
Score = 31.8 bits (63), Expect(5) = 2e-053
Identities = 12/17 (70%), Positives = 14/17 (82%)
Frame = -1 / +3
Query: 813 GDDKGARAIVKAFPHIK 763
GD ARA+VKA+PHIK
Sbjct: 669 GDGTTARALVKAYPHIK 719
Score = 31.8 bits (63), Expect(5) = 2e-053
Identities = 11/21 (52%), Positives = 16/21 (76%)
Frame = -1 / +2
Query: 1161 ERYRISPVSYLLVDGIPHEDH 1099
E YR++P+S +LVDG+ E H
Sbjct: 320 ELYRLTPLSRILVDGVTDEHH 382
Score = 25.4 bits (49), Expect(5) = 9e-032
Identities = 11/16 (68%), Positives = 12/16 (75%)
Frame = +2 / -3
Query: 767 MCGKALTMALAPLSSP 814
MCG ALT ALA + SP
Sbjct: 715 MCG*ALTRALAVVPSP 668
Score = 23.1 bits (44), Expect(5) = 9e-032
Identities = 9/21 (42%), Positives = 14/21 (66%)
Frame = +2 / -1
Query: 1091 WFMWSS*GMPSTRR*DTGLMR 1153
+++W S PSTR D+G+ R
Sbjct: 390 FWLWCSSVTPSTRMRDSGVRR 328
>gb|AV922821.1|AV922821 AV922821 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp. vulgare
cDNA clone basd2i01 5', mRNA sequence
Length = 598
Score = 108 bits (230), Expect(3) = 2e-053
Identities = 45/84 (53%), Positives = 62/84 (73%)
Frame = -1 / +2
Query: 1419 PSDAELLKAQADIWRLSLSYLTPLSLRCAVELGIPTAIYRHGGAASAAELVTALSLPSAK 1240
P+DA+L++AQAD+WR SL +L ++LRCAV+LGIPTAI+R GG S ++LVTALSLP +K
Sbjct: 38 PTDAQLIQAQADLWRHSLCHLRAIALRCAVQLGIPTAIHRLGGTTSVSDLVTALSLPQSK 217
Query: 1239 LPFXXXXXXXLAASGVFTVDRQST 1168
+P+ LAASG ++ T
Sbjct: 218 MPYLGRVLRLLAASGALASPKEGT 289
Score = 81.3 bits (171), Expect(3) = 4e-035
Identities = 43/81 (53%), Positives = 47/81 (58%)
Frame = +2 / -2
Query: 1178 LSTVNTPDAAXXXXXXXXNGSLAEGRDSAVTSSAAEAAPPWR*IAVGMPSSTAHLSDRGV 1357
L PDAA G L GRD+AVT S E PP R*IAVGMPS TAHLS +
Sbjct: 279 LGDAKAPDAANNRKTRPRYGILDCGRDNAVTRSDTEVVPPSR*IAVGMPSWTAHLSAMAL 100
Query: 1358 R*ERLSRHMSACAFSSSASLG 1420
R +L RH SACA S AS+G
Sbjct: 99 RWHKLWRHRSACA*ISWASVG 37
Score = 73.0 bits (153), Expect(3) = 2e-053
Identities = 29/59 (49%), Positives = 40/59 (67%)
Frame = -1 / +2
Query: 1173 STEEERYRISPVSYLLVDGIPHEDHMNHTALVLTCTSTRYIEAGIGLAEWFKRDVVTSP 997
S +E Y + P+SYLLVDG+ + + A+VLT TS YIEA +GLA+WFK+D+ P
Sbjct: 272 SPKEGTYSLVPLSYLLVDGVFIDGEASQKAIVLTTTSRHYIEAALGLADWFKKDIAPPP 448
Score = 67.5 bits (141), Expect(3) = 2e-053
Identities = 29/50 (58%), Positives = 34/50 (68%)
Frame = -1 / +2
Query: 1002 SPFEELHGATLFHESMGSLDADFHDMASEALDAHDNFGIEIAMREFRDLF 853
SPFE++HGATLF ESM LD + M EAL AHD+ GI +RE DLF
Sbjct: 449 SPFEDVHGATLFEESMALLDPESDKMFHEALAAHDHLGIGTILRECHDLF 598
Score = 53.3 bits (110), Expect(3) = 4e-035
Identities = 28/53 (52%), Positives = 32/53 (60%)
Frame = +2 / -2
Query: 986 SSSNGDVTTSLLNHSASPIPASM*RVEVQVSTRAVWFMWSS*GMPSTRR*DTG 1144
S+ +G S LN SASP ASM* +EV VST A W S PSTRR D+G
Sbjct: 459 SNGDGGGAMSFLNQSASPKAASM*CLEVVVSTMAFWLASPSMNTPSTRRYDSG 301
Score = 52.8 bits (109), Expect(3) = 4e-035
Identities = 26/50 (52%), Positives = 33/50 (66%)
Frame = +2 / -2
Query: 854 NKSLNSRIAISMPKLSWASKASLAMSWKSASRLPMLSWNRVAPCSSSNGD 1003
NKS +SR + +PK SWA+KAS + S SR +LS VAP +SSNGD
Sbjct: 597 NKSWHSRNIVPIPKWSWAAKASWNILSDSGSRSAILSSKSVAP*TSSNGD 448
>gb|AV926805.1|AV926805 AV926805 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp. vulgare
cDNA clone basd23n09 5', mRNA sequence
Length = 607
Score = 110 bits (234), Expect(3) = 5e-053
Identities = 47/92 (51%), Positives = 65/92 (70%)
Frame = -1 / +1
Query: 1443 AMASEVVRPSDAELLKAQADIWRLSLSYLTPLSLRCAVELGIPTAIYRHGGAASAAELVT 1264
A A + P+DA+L++AQAD+WR SL +L ++LRCAV+LGIPTAI+R GG S ++LVT
Sbjct: 25 AQAPTMAVPTDAQLIQAQADLWRHSLCHLRAIALRCAVQLGIPTAIHRLGGTTSVSDLVT 204
Query: 1263 ALSLPSAKLPFXXXXXXXLAASGVFTVDRQST 1168
ALSLP +K+P+ LAASG ++ T
Sbjct: 205 ALSLPQSKMPYLGRVLRLLAASGALASPKEGT 300
Score = 81.3 bits (171), Expect(3) = 2e-034
Identities = 43/81 (53%), Positives = 47/81 (58%)
Frame = +2 / -3
Query: 1178 LSTVNTPDAAXXXXXXXXNGSLAEGRDSAVTSSAAEAAPPWR*IAVGMPSSTAHLSDRGV 1357
L PDAA G L GRD+AVT S E PP R*IAVGMPS TAHLS +
Sbjct: 290 LGDAKAPDAANNRKTRPRYGILDCGRDNAVTRSDTEVVPPSR*IAVGMPSWTAHLSAMAL 111
Query: 1358 R*ERLSRHMSACAFSSSASLG 1420
R +L RH SACA S AS+G
Sbjct: 110 RWHKLWRHRSACA*ISWASVG 48
Score = 73.0 bits (153), Expect(3) = 5e-053
Identities = 29/59 (49%), Positives = 40/59 (67%)
Frame = -1 / +1
Query: 1173 STEEERYRISPVSYLLVDGIPHEDHMNHTALVLTCTSTRYIEAGIGLAEWFKRDVVTSP 997
S +E Y + P+SYLLVDG+ + + A+VLT TS YIEA +GLA+WFK+D+ P
Sbjct: 283 SPKEGTYSLVPLSYLLVDGVFIDGEASQKAIVLTTTSRHYIEAALGLADWFKKDIAPPP 459
Score = 64.8 bits (135), Expect(3) = 5e-053
Identities = 28/49 (57%), Positives = 33/49 (67%)
Frame = -1 / +1
Query: 1002 SPFEELHGATLFHESMGSLDADFHDMASEALDAHDNFGIEIAMREFRDL 856
SPFE++HGATLF ESM LD + M EAL AHD+ GI +RE DL
Sbjct: 460 SPFEDVHGATLFEESMALLDPESDKMFHEALAAHDHLGIGTILRECHDL 606
Score = 53.3 bits (110), Expect(3) = 2e-034
Identities = 28/53 (52%), Positives = 32/53 (60%)
Frame = +2 / -3
Query: 986 SSSNGDVTTSLLNHSASPIPASM*RVEVQVSTRAVWFMWSS*GMPSTRR*DTG 1144
S+ +G S LN SASP ASM* +EV VST A W S PSTRR D+G
Sbjct: 470 SNGDGGGAMSFLNQSASPKAASM*CLEVVVSTMAFWLASPSMNTPSTRRYDSG 312
Score = 50.1 bits (103), Expect(3) = 2e-034
Identities = 25/49 (51%), Positives = 32/49 (65%)
Frame = +2 / -3
Query: 857 KSLNSRIAISMPKLSWASKASLAMSWKSASRLPMLSWNRVAPCSSSNGD 1003
KS +SR + +PK SWA+KAS + S SR +LS VAP +SSNGD
Sbjct: 605 KSWHSRNIVPIPKWSWAAKASWNILSDSGSRSAILSSKSVAP*TSSNGD 459
>gb|BF259024.3|BF259024 HVSMEf0017H01f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEf0017H01f, mRNA sequence
Length = 804
Score = 127 bits (272), Expect(3) = 2e-052
Identities = 55/84 (65%), Positives = 68/84 (80%)
Frame = -1 / +1
Query: 1437 ASEVVRPSDAELLKAQADIWRLSLSYLTPLSLRCAVELGIPTAIYRHGGAASAAELVTAL 1258
A +V P+DAELL+AQ+D+WR SL YLTP+SLRCAV+LG+PTAI+R GGAAS +ELV AL
Sbjct: 67 AEKVFVPTDAELLQAQSDLWRHSLCYLTPMSLRCAVDLGVPTAIHRLGGAASPSELVAAL 246
Query: 1257 SLPSAKLPFXXXXXXXLAASGVFT 1186
SLP++KLPF LA +GVFT
Sbjct: 247 SLPASKLPFLARLLRQLATAGVFT 318
Score = 97.7 bits (207), Expect(3) = 2e-033
Identities = 48/84 (57%), Positives = 53/84 (63%)
Frame = +2 / -2
Query: 1187 VNTPDAAXXXXXXXXNGSLAEGRDSAVTSSAAEAAPPWR*IAVGMPSSTAHLSDRGVR*E 1366
V TP A NGSL GRD A TSS +AAPP R +AVG P STA SD GVR*+
Sbjct: 317 VKTPAVASWRSRRARNGSLDAGRDRAATSSDGDAAPPRRWMAVGTPRSTAQRSDMGVR*Q 138
Query: 1367 RLSRHMSACAFSSSASLGRTTSEA 1438
RL RH S CA+SSSAS+G T A
Sbjct: 137 RLWRHRSDCAWSSSASVGTNTFSA 66
Score = 75.8 bits (159), Expect(3) = 2e-022
Identities = 42/82 (51%), Positives = 48/82 (58%)
Frame = +1 / -1
Query: 1186 GEHARRGEEPQQAAEERQLSGGERQRRDQLSG*GSPAMAVDRRRDAKLHGAPQ*QGREVG 1365
GE ARRGE QQA EERQL G+ Q DQ A AVD R DA++ GA + GREV
Sbjct: 318 GEDARRGELAQQAGEERQLGRGQGQGGDQFGRGRGAAEAVDGRGDAEVDGAAERHGREVA 139
Query: 1366 EAEPPYVGLCL**LGVARADNL 1431
EA P VGL L L V ++L
Sbjct: 138 EAVAPQVGLRLEQLRVGGDEHL 73
Score = 66.6 bits (139), Expect(3) = 2e-052
Identities = 25/54 (46%), Positives = 38/54 (70%)
Frame = -1 / +1
Query: 1173 STEEERYRISPVSYLLVDGIPHEDHMNHTALVLTCTSTRYIEAGIGLAEWFKRD 1012
ST+ YR++P+SYLLVDG+ + + TA+V S Y+EA +GLA+WF++D
Sbjct: 319 STDAGTYRLNPLSYLLVDGVRIDGDASQTAIVRAAASRYYVEADMGLADWFRKD 480
Score = 51.5 bits (106), Expect(3) = 2e-052
Identities = 19/40 (47%), Positives = 27/40 (67%)
Frame = -1 / +1
Query: 1008 VTSPFEELHGATLFHESMGSLDADFHDMASEALDAHDNFG 889
V SPFE++HGA +F ESM LD + + +A+ AHD+ G
Sbjct: 493 VPSPFEDMHGAAIFEESMALLDPEMDQLIHDAVAAHDHHG 612
Score = 47.8 bits (98), Expect(3) = 2e-033
Identities = 26/53 (49%), Positives = 30/53 (56%)
Frame = +2 / -2
Query: 1013 SLLNHSASPIPASM*RVEVQVSTRAVWFMWSS*GMPSTRR*DTGLMRYRSSSV 1171
S LN SA P+ AS * E T AVW S PSTRR ++GL RY +SV
Sbjct: 479 SFLNQSARPMSAST**REAAARTMAVWLASPSMRTPSTRRYESGLRRYVPASV 321
Score = 35.9 bits (72), Expect(3) = 2e-022
Identities = 17/35 (48%), Positives = 21/35 (60%)
Frame = +1 / -1
Query: 895 VVVGVQGLARHVVEICVEAPHALVEQSRPVQLLER 999
VVVG G+ +V + VE HAL E PV +LER
Sbjct: 606 VVVGSDGVVDELVHLRVE*RHALFEDGGPVHVLER 502
Score = 35.9 bits (72), Expect(3) = 2e-033
Identities = 19/40 (47%), Positives = 21/40 (52%)
Frame = +2 / -2
Query: 890 PKLSWASKASLAMSWKSASRLPMLSWNRVAPCSSSNGDVT 1009
P SWA+ AS S S MLS APC SSNG+ T
Sbjct: 611 PWWSWAATASWMSWSISGSSSAMLSSKMAAPCMSSNGEGT 492
Score = 32.7 bits (65), Expect(3) = 2e-022
Identities = 15/45 (33%), Positives = 19/45 (42%)
Frame = +1 / -1
Query: 1021 EPLRQPYPRLDVARRGAGEHQSGXXXXXXXXXXXHQEVGHGADAV 1155
EP+ Q + RL V RG G H H+EV +AV
Sbjct: 471 EPVGQAHVRLHVVARGRGAHDGRLAGVAVDADAVHEEVRERVEAV 337
>gb|AL504052.1|AL504052 AL504052 Hordeum vulgare Barke roots Hordeum vulgare subsp. vulgare
cDNA clone HW04A17V 5', mRNA sequence
Length = 661
Score = 108 bits (230), Expect(3) = 3e-052
Identities = 47/85 (55%), Positives = 59/85 (69%)
Frame = -1 / +2
Query: 1419 PSDAELLKAQADIWRLSLSYLTPLSLRCAVELGIPTAIYRHGGAASAAELVTALSLPSAK 1240
P+DAELL+AQAD+WR SL YLT + LRCA++LGIPTAI+R GG S +L+ ALSLP++K
Sbjct: 29 PTDAELLQAQADLWRHSLYYLTSMGLRCAIKLGIPTAIHRLGGXTSLPDLMAALSLPASK 208
Query: 1239 LPFXXXXXXXLAASGVFTVDRQSTE 1165
PF L SGVF +E
Sbjct: 209 QPFLDRLMRVLVTSGVFAAGGNGSE 283
Score = 86.8 bits (183), Expect(3) = 3e-052
Identities = 33/63 (52%), Positives = 44/63 (69%)
Frame = -1 / +2
Query: 1008 VTSPFEELHGATLFHESMGSLDADFHDMASEALDAHDNFGIEIAMREFRDLFEGIQSMTY 829
V SPFE++HGA+LF ES LD + ++ +E L HDN GI MRE DLF+G++S+T
Sbjct: 470 VPSPFEDVHGASLFDESTALLDKELDELVTEGLPXHDNLGIGTIMRECHDLFKGLESLTD 649
Query: 828 CCG 820
CCG
Sbjct: 650 CCG 658
Score = 79.4 bits (167), Expect(3) = 4e-034
Identities = 40/76 (52%), Positives = 43/76 (56%)
Frame = +2 / -2
Query: 1193 TPDAAXXXXXXXXNGSLAEGRDSAVTSSAAEAAPPWR*IAVGMPSSTAHLSDRGVR*ERL 1372
TPD NG L G DSA S +E PP R +AVGMPS A S VR* RL
Sbjct: 255 TPDVTSTRIRRSRNGCLLAGSDSAAIKSGSEVXPPRRWMAVGMPSLMAQRSPMDVR**RL 76
Query: 1373 SRHMSACAFSSSASLG 1420
RH SACA SSSAS+G
Sbjct: 75 WRHRSACACSSSASVG 28
Score = 70.3 bits (147), Expect(3) = 2e-027
Identities = 34/73 (46%), Positives = 46/73 (63%)
Frame = +1 / -1
Query: 820 TAAVGHGLDPLEQVPELPHSYLDAEVVVGVQGLARHVVEICVEAPHALVEQSRPVQLLER 999
TAAVG L+PLE+V LPH DA+VV+ Q L +VE+ V+ ALVE+ R + +LER
Sbjct: 658 TAAVGXRLEPLEEVMALPHDRADAKVVMXRQPLGDQLVELLVQERRALVEERRAMHVLER 479
Query: 1000 *RDHVPLEPLRQP 1038
R P + L +P
Sbjct: 478 RRHRRPRDVLPEP 440
Score = 67.5 bits (141), Expect(3) = 2e-027
Identities = 38/83 (45%), Positives = 47/83 (56%)
Frame = +1 / -1
Query: 1165 LRALPVDGEHARRGEEPQQAAEERQLSGGERQRRDQLSG*GSPAMAVDRRRDAKLHGAPQ 1344
L A+ + RR + A EE L+ +RQR Q+ G PA AVD RRDA+L GA +
Sbjct: 283 LGAVAAGCKDTRRDQHTH*AVEEWLLARRKRQRGHQVRQRGXPAEAVDGRRDAELDGAAE 104
Query: 1345 *QGREVGEAEPPYVGLCL**LGV 1413
GREV EA P V LCL LG+
Sbjct: 103 PHGREVVEAVAPQVRLCLQQLGI 35
Score = 64.8 bits (135), Expect(3) = 4e-034
Identities = 30/63 (47%), Positives = 38/63 (60%)
Frame = +2 / -2
Query: 821 PQQ*VMDWIPSNKSLNSRIAISMPKLSWASKASLAMSWKSASRLPMLSWNRVAPCSSSNG 1000
PQQ V D P +S +SR+ + MP+LSW S+ S S SR +LS APC+SSNG
Sbjct: 657 PQQSVRDSSPLKRSWHSRMIVPMPRLSWXGSPSVTSSSSSLSRSAVLSSKSDAPCTSSNG 478
Query: 1001 DVT 1009
D T
Sbjct: 477 DGT 469
Score = 50.1 bits (103), Expect(3) = 3e-052
Identities = 17/36 (47%), Positives = 26/36 (72%)
Frame = -1 / +2
Query: 1116 IPHEDHMNHTALVLTCTSTRYIEAGIGLAEWFKRDV 1009
+ H++H + T+ VL TS Y EA +GLA+WF++DV
Sbjct: 350 VGHDEHHSQTSFVLAATSPFYTEAALGLADWFRKDV 457
Score = 39.6 bits (80), Expect(3) = 4e-034
Identities = 25/66 (37%), Positives = 33/66 (50%)
Frame = +2 / -2
Query: 1010 TSLLNHSASPIPASM*RVEVQVSTRAVWFMWSS*GMPSTRR*DTGLMRYRSSSVLCLSTV 1189
TS LN SASP AS+*+ +V ST+ VW SS + R +R +SS +
Sbjct: 456 TSFLNQSASPSAASV*KGDVAASTKDVWLWCSSWPTTPSTRMRDSGLRLKSSPASDPDSE 277
Query: 1190 NTPDAA 1207
P AA
Sbjct: 276 PLPPAA 259
Score = 23.1 bits (44), Expect(3) = 2e-027
Identities = 10/21 (47%), Positives = 12/21 (57%)
Frame = +1 / -1
Query: 1021 EPLRQPYPRLDVARRGAGEHQ 1083
EP+ QP L V R GEH+
Sbjct: 445 EPVGQPQRGLRVEGRRRGEHE 383
>gb|BJ462654.1|BJ462654 BJ462654 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags29l10 5', mRNA sequence
Length = 720
Score = 85.4 bits (180), Expect(3) = 1e-051
Identities = 35/56 (62%), Positives = 41/56 (73%)
Frame = -1 / +2
Query: 513 MLETHLLMDIGMMTMTKGRQRDEKEWSELFTKAGFSEYKILKEFGARVAFEVYP*D 346
M E LLMD+ MM T+G QRDE W ELF KAGF++YKI+K+ GAR EVYP*D
Sbjct: 539 MFEAQLLMDMLMMVNTRGGQRDENHWCELFKKAGFTDYKIVKKLGARSVIEVYP*D 706
Score = 83.5 bits (176), Expect(3) = 1e-051
Identities = 34/72 (47%), Positives = 47/72 (65%)
Frame = -1 / +2
Query: 735 IATKPADGAMINYVEGDMFSFIPPAQTXXXXXXXXXLTDEECVKLLAQCRKAIPSRKDGG 556
+ K +INYV GD+F +PP+Q +DE+CVK+LAQCRKAIP R++GG
Sbjct: 311 VVEKAPADGVINYVAGDLFHTVPPSQVVMLKLVLHFWSDEDCVKILAQCRKAIPPREEGG 490
Query: 555 KVIIGDIMIDHS 520
KVII +I++ S
Sbjct: 491 KVIIIEIVVGPS 526
Score = 74.4 bits (156), Expect(3) = 1e-051
Identities = 30/66 (45%), Positives = 39/66 (59%)
Frame = -1 / +2
Query: 1008 VTSPFEELHGATLFHESMGSLDADFHDMASEALDAHDNFGIEIAMREFRDLFEGIQSMTY 829
V SPFEE G LF E LD + + ++ L AHDN GI +RE D+F+G+ S+T
Sbjct: 47 VLSPFEEKFGVPLFDEKTALLDQELDSVCNQGLAAHDNLGIATILRECGDIFKGLDSLTD 226
Query: 828 CCGNFG 811
CCG G
Sbjct: 227 CCGGDG 244
Score = 57.0 bits (118), Expect(4) = 4e-034
Identities = 28/58 (48%), Positives = 33/58 (56%)
Frame = +1 / -3
Query: 529 NHNITDYNFPAILP*RNRLPALSQELDALLIGQVVQHKL*HDSLSRWNETEHVTFDIV 702
NHN+ DY +LP RN L AL + A+LI V HKL H L W+ E VT DIV
Sbjct: 517 NHNLYDYYLSPLLPRRNGLSALG*DFHAILITPKV*HKLEHHHLRWWDGVEQVTRDIV 344
Score = 54.2 bits (112), Expect(4) = 4e-034
Identities = 28/50 (56%), Positives = 32/50 (64%)
Frame = +2 / -1
Query: 347 SHG*TSKATRAPNSFRILYSLNPALVKSSLHSFSSLCRPFVMVIMPMSIR 496
S+G*TS RAPN F IL S+NPA + SS FSS P V IM +SIR
Sbjct: 705 SYG*TSMTDRAPNFFTIL*SVNPAFLNSSHQ*FSSR*PPLVFTIMSISIR 556
Score = 45.5 bits (93), Expect(4) = 4e-034
Identities = 19/37 (51%), Positives = 25/37 (67%)
Frame = +2 / -1
Query: 704 IIAPSAGLVAMILGGASTVHFMCGKALTMALAPLSSP 814
++ PSAG + G ++TVH MCG ALT ALA + SP
Sbjct: 345 LMTPSAGAFSTTFGRSNTVHLMCG*ALTRALAVVPSP 235
Score = 44.6 bits (91), Expect(4) = 4e-034
Identities = 26/68 (38%), Positives = 34/68 (50%)
Frame = +2 / -1
Query: 812 PKLPQQ*VMDWIPSNKSLNSRIAISMPKLSWASKASLAMSWKSASRLPMLSWNRVAPCSS 991
P PQQ V + P S +SR +++P+LSWA+K L S S + S P S
Sbjct: 243 PSPPQQSVRESSPLKMSPHSRSMVAIPRLSWAAKPWLQTESSS*SSRAVFSSKSGTPNFS 64
Query: 992 SNGDVTTS 1015
S GD T S
Sbjct: 63 SKGDNTGS 40
>gb|BF256951.3|BF256951 HVSMEf0011H09f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEf0011H09f, mRNA sequence
Length = 819
Score = 99.6 bits (211), Expect(3) = 3e-051
Identities = 42/77 (54%), Positives = 54/77 (70%)
Frame = -1 / +2
Query: 1419 PSDAELLKAQADIWRLSLSYLTPLSLRCAVELGIPTAIYRHGGAASAAELVTALSLPSAK 1240
P+DAELL+AQAD+WR +L YLT + LRCAV+LGIPTA++ GG S +L LS+P++K
Sbjct: 80 PTDAELLQAQADLWRHTLYYLTSMGLRCAVKLGIPTAMHNLGGVTSLPDLAAVLSIPASK 259
Query: 1239 LPFXXXXXXXLAASGVF 1189
PF L SGVF
Sbjct: 260 QPFLGRLMRALVTSGVF 310
Score = 71.6 bits (150), Expect(3) = 3e-051
Identities = 28/59 (47%), Positives = 41/59 (69%)
Frame = -1 / +2
Query: 1008 VTSPFEELHGATLFHESMGSLDADFHDMASEALDAHDNFGIEIAMREFRDLFEGIQSMT 832
V S FE++H A+LF ES +LD + + ++ L+AHDN GI MRE DLF+G++S+T
Sbjct: 503 VPSVFEDVHSASLFDESTAALDPELDALVTDGLEAHDNLGIGTIMRECHDLFKGLESLT 679
Score = 70.7 bits (148), Expect(3) = 3e-051
Identities = 26/51 (50%), Positives = 39/51 (76%)
Frame = -1 / +2
Query: 1161 ERYRISPVSYLLVDGIPHEDHMNHTALVLTCTSTRYIEAGIGLAEWFKRDV 1009
E +R++P+S +LVDG+ E+H + T+ VL TS Y+EA +G+AEWFK+DV
Sbjct: 341 ELFRLNPLSRVLVDGVDAEEHHSQTSFVLAGTSPHYMEAALGMAEWFKKDV 493
Score = 68.9 bits (144), Expect(3) = 4e-031
Identities = 38/86 (44%), Positives = 45/86 (52%)
Frame = +2 / -1
Query: 1193 TPDAAXXXXXXXXNGSLAEGRDSAVTSSAAEAAPPWR*IAVGMPSSTAHLSDRGVR*ERL 1372
TP+ NG L G DS S +E PP IAVGMPS TA S VR* R+
Sbjct: 306 TPEVTSARIRRPRNGCLLAGMDSTAARSGSEVTPPRLCIAVGMPSLTAQRSPMDVR**RV 127
Query: 1373 SRHMSACAFSSSASLGRTTSEAIARV 1450
RH SA A SSSAS+G + + A +
Sbjct: 126 WRHRSA*ACSSSASVGTSIAGTWAAI 49
Score = 53.3 bits (110), Expect(3) = 4e-031
Identities = 28/55 (50%), Positives = 33/55 (60%)
Frame = +2 / -1
Query: 1010 TSLLNHSASPIPASM*RVEVQVSTRAVWFMWSS*GMPSTRR*DTGLMRYRSSSVL 1174
TS LNHSA P ASM* +V ST+ VW SS PSTR ++GL R S+ L
Sbjct: 492 TSFLNHSAIPSAASM*CGDVPASTKDVWLWCSSASTPSTRTRESGLRRKSSAPEL 328
Score = 51.5 bits (106), Expect(3) = 4e-031
Identities = 24/59 (40%), Positives = 36/59 (61%)
Frame = +2 / -1
Query: 833 VMDWIPSNKSLNSRIAISMPKLSWASKASLAMSWKSASRLPMLSWNRVAPCSSSNGDVT 1009
V D P +S +SR+ + +P+LSWAS+ S+ + S S+ +LS A C+SSN D T
Sbjct: 678 VRDSSPLKRSWHSRMMVPIPRLSWASRPSVTSASSSGSKAAVLSSKSDALCTSSNTDGT 502
>gb|AL503735.1|AL503735 AL503735 Hordeum vulgare Barke roots Hordeum vulgare subsp. vulgare
cDNA clone HW03D24T 5', mRNA sequence
Length = 700
Score = 79.4 bits (167), Expect(4) = 3e-051
Identities = 30/72 (41%), Positives = 46/72 (63%)
Frame = -1 / +1
Query: 735 IATKPADGAMINYVEGDMFSFIPPAQTXXXXXXXXXLTDEECVKLLAQCRKAIPSRKDGG 556
+ K ++NYV GD+F +P AQ +D++CVK+L QC+ AIPSR++GG
Sbjct: 163 VIEKTPSDCVVNYVAGDLFHTVPKAQAVMLKLVLHHWSDDDCVKILTQCKNAIPSREEGG 342
Query: 555 KVIIGDIMIDHS 520
KVI+ DI+++ S
Sbjct: 343 KVIVIDIVVEPS 378
Score = 76.2 bits (160), Expect(4) = 3e-051
Identities = 29/53 (54%), Positives = 38/53 (71%)
Frame = -1 / +1
Query: 513 MLETHLLMDIGMMTMTKGRQRDEKEWSELFTKAGFSEYKILKEFGARVAFEVY 355
M E LMD+ M+ T+GRQR E +W +LF KAGF++YKI+K+ GAR EVY
Sbjct: 391 MFEAQTLMDMLMLVFTRGRQRSENDWRDLFMKAGFTDYKIIKKMGARGVIEVY 549
Score = 59.7 bits (124), Expect(4) = 2e-030
Identities = 27/44 (61%), Positives = 31/44 (70%)
Frame = +2 / -3
Query: 569 REGIAFRH*ARSLTHSSSVRWCSTSFSTTV*AGGMKLNMSPST* 700
REG+AF H R T SSS++WCSTSFS T *A G N SP+T*
Sbjct: 329 REGMAFLHWVRIFTQSSSLQWCSTSFSITA*AFGTVWNRSPAT* 198
Score = 52.8 bits (109), Expect(4) = 3e-051
Identities = 21/33 (63%), Positives = 24/33 (72%)
Frame = -1 / +1
Query: 813 GDDKGARAIVKAFPHIKCTVLAPPKIIATKPAD 715
GD K ARAI KA PH+KCTVL PK+I P+D
Sbjct: 88 GDGKTARAITKAHPHVKCTVLDLPKVIEKTPSD 186
Score = 51.0 bits (105), Expect(4) = 3e-051
Identities = 19/32 (59%), Positives = 23/32 (71%)
Frame = -1 / +1
Query: 906 AHDNFGIEIAMREFRDLFEGIQSMTYCCGNFG 811
AHDN GI MRE DLF+G++S+T CCG G
Sbjct: 1 AHDNLGIGTIMRECHDLFKGLESLTDCCGGDG 96
Score = 50.6 bits (104), Expect(4) = 2e-030
Identities = 18/53 (33%), Positives = 29/53 (54%)
Frame = +1 / -2
Query: 355 IDFEGNTSSKFLQDLVFAEPCFGEELAPFFFISLPSFCHGHHADVHQEVSFQH 513
+D + + + FL D V EPCF EE++P F +L + H VH+ + +H
Sbjct: 549 VDLDDTSCTHFLDDFVVGEPCFHEEVSPVIFATLTASREHKHEHVHESLGLKH 391
Score = 42.8 bits (87), Expect(4) = 2e-030
Identities = 19/33 (57%), Positives = 22/33 (66%)
Frame = +2 / -3
Query: 716 SAGLVAMILGGASTVHFMCGKALTMALAPLSSP 814
S G+ +M LG +STVH CG AL MALA SP
Sbjct: 185 SDGVFSMTLGRSSTVHLTCGCALVMALAVFPSP 87
Score = 35.4 bits (71), Expect(4) = 2e-030
Identities = 14/31 (45%), Positives = 20/31 (64%)
Frame = +2 / -3
Query: 812 PKLPQQ*VMDWIPSNKSLNSRIAISMPKLSW 904
P PQQ V D P +S +SR+ + +P+LSW
Sbjct: 95 PSPPQQSVRDSSPLKRSWHSRMMVPIPRLSW 3
>gb|BF260366.2|BF260366 HVSMEf0021M22f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEf0021M22f, mRNA sequence
Length = 788
Score = 112 bits (239), Expect(5) = 2e-050
Identities = 50/91 (54%), Positives = 62/91 (68%)
Frame = -1 / +2
Query: 1443 AMASEVVRPSDAELLKAQADIWRLSLSYLTPLSLRCAVELGIPTAIYRHGGAASAAELVT 1264
A A + P+DAELL+AQAD+WR SL YL+ + LRCAV+L IPT I+R GG A A+L+
Sbjct: 35 AQADTIEVPTDAELLQAQADLWRHSLYYLSSMGLRCAVQLQIPTTIHRLGGVALLADLMA 214
Query: 1263 ALSLPSAKLPFXXXXXXXLAASGVFTVDRQS 1171
ALSLPS K+PF L SGVF D+ S
Sbjct: 215 ALSLPSVKMPFLHRLMRVLVTSGVFAADKDS 307
Score = 76.2 bits (160), Expect(5) = 9e-032
Identities = 41/91 (45%), Positives = 50/91 (54%)
Frame = +2 / -3
Query: 1178 LSTVNTPDAAXXXXXXXXNGSLAEGRDSAVTSSAAEAAPPWR*IAVGMPSSTAHLSDRGV 1357
LS TPD NG +GRD+A SA++A PP R + VG+ S TA S
Sbjct: 300 LSAAKTPDVTSTRMSRWRNGIFTDGRDNAAIRSASKATPPRRWMVVGI*SWTAQRSPMED 121
Query: 1358 R*ERLSRHMSACAFSSSASLGRTTSEAIARV 1450
R* RL RH SACA SSSAS+G + A A +
Sbjct: 120 R**RLWRHRSACACSSSASVGTSMVSA*AAI 28
Score = 51.5 bits (106), Expect(5) = 2e-050
Identities = 20/40 (50%), Positives = 26/40 (65%)
Frame = -1 / +2
Query: 1008 VTSPFEELHGATLFHESMGSLDADFHDMASEALDAHDNFG 889
V SPFE++HGA +F E +D D +A+E L HDNFG
Sbjct: 479 VPSPFEDMHGAPVFDERTPLMDEDLDAVANEGLAGHDNFG 598
Score = 44.6 bits (91), Expect(5) = 9e-032
Identities = 21/40 (52%), Positives = 25/40 (62%)
Frame = +2 / -3
Query: 890 PKLSWASKASLAMSWKSASRLPMLSWNRVAPCSSSNGDVT 1009
PKLSW + SLA + KS+S +LS APC SS GD T
Sbjct: 597 PKLSWPANPSLATASKSSSMRGVLSSKTGAPCMSSKGDGT 478
Score = 41.8 bits (85), Expect(5) = 2e-050
Identities = 16/25 (64%), Positives = 19/25 (76%)
Frame = -1 / +3
Query: 813 GDDKGARAIVKAFPHIKCTVLAPPK 739
GD ARA+VK +PHI+CTVL PK
Sbjct: 669 GDGTTARALVKGYPHIRCTVLDLPK 743
Score = 37.3 bits (75), Expect(5) = 2e-050
Identities = 13/33 (39%), Positives = 21/33 (63%)
Frame = -1 / +2
Query: 1107 EDHMNHTALVLTCTSTRYIEAGIGLAEWFKRDV 1009
++H + VL T+ EA +GLA+WFK+D+
Sbjct: 371 DEHHSQKYFVLAVTAPHCAEAALGLADWFKKDL 469
Score = 33.6 bits (67), Expect(5) = 9e-032
Identities = 14/24 (58%), Positives = 17/24 (70%)
Frame = +2 / -2
Query: 743 GGASTVHFMCGKALTMALAPLSSP 814
G ++TVH MCG LT ALA + SP
Sbjct: 739 GRSNTVHLMCG*PLTRALAVVPSP 668
Score = 32.7 bits (65), Expect(5) = 9e-032
Identities = 13/22 (59%), Positives = 15/22 (68%)
Frame = +1 / -2
Query: 1018 LEPLRQPYPRLDVARRGAGEHQ 1083
LEP+RQP L RRG GEH+
Sbjct: 460 LEPVRQPQRSLCAMRRGHGEHE 395
Score = 31.8 bits (63), Expect(5) = 2e-050
Identities = 11/21 (52%), Positives = 16/21 (76%)
Frame = -1 / +2
Query: 1161 ERYRISPVSYLLVDGIPHEDH 1099
E YR++P+S +LVDG+ E H
Sbjct: 320 ELYRLTPLSRILVDGVTDEHH 382
Score = 23.1 bits (44), Expect(5) = 9e-032
Identities = 9/21 (42%), Positives = 14/21 (66%)
Frame = +2 / -3
Query: 1091 WFMWSS*GMPSTRR*DTGLMR 1153
+++W S PSTR D+G+ R
Sbjct: 390 FWLWCSSVTPSTRMRDSGVRR 328
>gb|AL504343.1|AL504343 AL504343 Hordeum vulgare Barke roots Hordeum vulgare subsp. vulgare
cDNA clone HW04P19V 5', mRNA sequence
Length = 660
Score = 98.7 bits (209), Expect(3) = 2e-050
Identities = 42/71 (59%), Positives = 54/71 (76%)
Frame = -1 / +2
Query: 1443 AMASEVVRPSDAELLKAQADIWRLSLSYLTPLSLRCAVELGIPTAIYRHGGAASAAELVT 1264
A + + P+DA+L+KAQAD+ R SL+YLT ++LRCA+ELGIPTAI R GG AS +L+
Sbjct: 26 AQSQTMTVPTDAQLIKAQADLQRHSLTYLTSMALRCAIELGIPTAIQRLGGTASLPDLMA 205
Query: 1263 ALSLPSAKLPF 1231
ALSLP K PF
Sbjct: 206 ALSLPPPKAPF 238
Score = 80.8 bits (170), Expect(3) = 2e-050
Identities = 35/66 (53%), Positives = 42/66 (63%)
Frame = -1 / +2
Query: 1008 VTSPFEELHGATLFHESMGSLDADFHDMASEALDAHDNFGIEIAMREFRDLFEGIQSMTY 829
V SPFE +H A F ESM LD D + EAL AHD+ GI +RE R LF+G+QS+T
Sbjct: 458 VPSPFEHVHAAAPFDESMTLLDPDTDKLFYEALAAHDHMGIGTVLRECRGLFDGLQSLTD 637
Query: 828 CCGNFG 811
CCG G
Sbjct: 638 CCGGDG 655
Score = 75.8 bits (159), Expect(3) = 2e-031
Identities = 40/74 (54%), Positives = 43/74 (58%)
Frame = +2 / -1
Query: 1199 DAAXXXXXXXXNGSLAEGRDSAVTSSAAEAAPPWR*IAVGMPSSTAHLSDRGVR*ERLSR 1378
D A NG+L G DSA S +A PP R IAVGMPSS AHLS VR* RL R
Sbjct: 270 DLASSRRTRLRNGALGGGSDSAAIRSGNDAVPPRRWIAVGMPSSMAHLSAMDVR*VRLWR 91
Query: 1379 HMSACAFSSSASLG 1420
SACA S AS+G
Sbjct: 90 CRSACALISWASVG 49
Score = 60.2 bits (125), Expect(3) = 2e-031
Identities = 32/71 (45%), Positives = 40/71 (56%)
Frame = +2 / -1
Query: 812 PKLPQQ*VMDWIPSNKSLNSRIAISMPKLSWASKASLAMSWKSASRLPMLSWNRVAPCSS 991
P PQQ V D PSN+ +SR + +P SWA++AS S SR MLS A C+
Sbjct: 654 PSPPQQSVSDCRPSNRPRHSRSTVPIPIWSWAARAS*NSLSVSGSRSVMLSSKGAAACTC 475
Query: 992 SNGDVTTSLLN 1024
SNGD T S L+
Sbjct: 474 SNGDGTGSALS 442
Score = 59.3 bits (123), Expect(3) = 2e-050
Identities = 23/53 (43%), Positives = 34/53 (64%)
Frame = -1 / +2
Query: 1170 TEEERYRISPVSYLLVDGIPHEDHMNHTALVLTCTSTRYIEAGIGLAEWFKRD 1012
TE Y ++P+SY+LVDG+ + A L TS ++E+G+GLA+WFK D
Sbjct: 287 TEAGIYSLTPLSYILVDGVLIDGEARQVAFPLAVTSRYHMESGLGLADWFKND 445
Score = 38.6 bits (78), Expect(3) = 2e-031
Identities = 22/45 (48%), Positives = 25/45 (55%)
Frame = +2 / -1
Query: 1013 SLLNHSASPIPASM*RVEVQVSTRAVWFMWSS*GMPSTRR*DTGL 1147
S LN SA P P SM* EV S +A S PSTR *D+G+
Sbjct: 444 SFLNQSARPRPDSM*YREVTASGKATCLASPSMSTPSTRM*DSGV 310
>gb|AV925371.1|AV925371 AV925371 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp. vulgare
cDNA clone basd22o21 5', mRNA sequence
Length = 544
Score = 90.4 bits (191), Expect(3) = 5e-050
Identities = 37/64 (57%), Positives = 45/64 (70%)
Frame = -1 / +2
Query: 1002 SPFEELHGATLFHESMGSLDADFHDMASEALDAHDNFGIEIAMREFRDLFEGIQSMTYCC 823
SPFE++HGATLF ESM LD + M EAL AHD+ GI +RE DLF+G+QS+T CC
Sbjct: 341 SPFEDVHGATLFEESMALLDPESDKMFHEALAAHDHLGIGTILRECHDLFKGVQSLTDCC 520
Query: 822 GNFG 811
G G
Sbjct: 521 GGDG 532
Score = 74.4 bits (156), Expect(3) = 5e-050
Identities = 32/60 (53%), Positives = 42/60 (70%)
Frame = -1 / +2
Query: 1347 SLRCAVELGIPTAIYRHGGAASAAELVTALSLPSAKLPFXXXXXXXLAASGVFTVDRQST 1168
+LRCAV+LGIPTAI+R GG S ++LVTALSLP +K+P+ LAASG ++ T
Sbjct: 2 ALRCAVQLGIPTAIHRLGGTTSVSDLVTALSLPQSKMPYLGRVLRLLAASGALASPKEGT 181
Score = 73.0 bits (153), Expect(3) = 5e-050
Identities = 29/59 (49%), Positives = 40/59 (67%)
Frame = -1 / +2
Query: 1173 STEEERYRISPVSYLLVDGIPHEDHMNHTALVLTCTSTRYIEAGIGLAEWFKRDVVTSP 997
S +E Y + P+SYLLVDG+ + + A+VLT TS YIEA +GLA+WFK+D+ P
Sbjct: 164 SPKEGTYSLVPLSYLLVDGVFIDGEASQKAIVLTTTSRHYIEAALGLADWFKKDIAPPP 340
Score = 71.6 bits (150), Expect(3) = 1e-034
Identities = 34/64 (53%), Positives = 41/64 (64%)
Frame = +2 / -2
Query: 812 PKLPQQ*VMDWIPSNKSLNSRIAISMPKLSWASKASLAMSWKSASRLPMLSWNRVAPCSS 991
P PQQ V DW P NKS +SR + +PK SWA+KAS + S SR +LS VAP +S
Sbjct: 531 PSPPQQSVSDWTPLNKSWHSRNIVPIPKWSWAAKASWNILSDSGSRSAILSSKSVAP*TS 352
Query: 992 SNGD 1003
SNGD
Sbjct: 351 SNGD 340
Score = 60.6 bits (126), Expect(3) = 1e-034
Identities = 31/56 (55%), Positives = 32/56 (57%)
Frame = +2 / -2
Query: 1178 LSTVNTPDAAXXXXXXXXNGSLAEGRDSAVTSSAAEAAPPWR*IAVGMPSSTAHLS 1345
L PDAA G L GRD+AVT S E PP R*IAVGMPS TAHLS
Sbjct: 171 LGDAKAPDAANNRKTRPRYGILDCGRDNAVTRSDTEVVPPSR*IAVGMPSWTAHLS 4
Score = 53.3 bits (110), Expect(3) = 1e-034
Identities = 28/53 (52%), Positives = 32/53 (60%)
Frame = +2 / -2
Query: 986 SSSNGDVTTSLLNHSASPIPASM*RVEVQVSTRAVWFMWSS*GMPSTRR*DTG 1144
S+ +G S LN SASP ASM* +EV VST A W S PSTRR D+G
Sbjct: 351 SNGDGGGAMSFLNQSASPKAASM*CLEVVVSTMAFWLASPSMNTPSTRRYDSG 193
>gb|BI778179.2|BI778179 EBro07_SQ002_H05_R root, 3 week, reduced light, cv Optic, EBro07
Hordeum vulgare subsp. vulgare cDNA clone
EBro07_SQ002_H05 5', mRNA sequence
Length = 643
Score = 79.0 bits (166), Expect(4) = 2e-049
Identities = 31/66 (46%), Positives = 44/66 (66%)
Frame = -1 / +1
Query: 1008 VTSPFEELHGATLFHESMGSLDADFHDMASEALDAHDNFGIEIAMREFRDLFEGIQSMTY 829
V S FE++H A+LF ES +LD + + ++ L AHDN GI +RE DLF+G++S+T
Sbjct: 211 VPSVFEDVHSASLFDESTAALDPELDALVTDGLAAHDNLGIGTIIRECHDLFKGLESLTD 390
Query: 828 CCGNFG 811
CCG G
Sbjct: 391 CCGGDG 408
Score = 62.9 bits (131), Expect(4) = 2e-049
Identities = 22/50 (44%), Positives = 37/50 (74%)
Frame = -1 / +1
Query: 1161 ERYRISPVSYLLVDGIPHEDHMNHTALVLTCTSTRYIEAGIGLAEWFKRD 1012
E + ++P+S +LVDG+ ++H + T+ VL TS Y+EA +G+A+WFK+D
Sbjct: 49 ELFGLNPLSRILVDGVVADEHHSQTSFVLAGTSRHYMEAALGMADWFKKD 198
Score = 60.2 bits (125), Expect(4) = 6e-037
Identities = 28/66 (42%), Positives = 41/66 (62%)
Frame = +2 / -3
Query: 812 PKLPQQ*VMDWIPSNKSLNSRIAISMPKLSWASKASLAMSWKSASRLPMLSWNRVAPCSS 991
P PQQ V D P +S +SR+ + +P+LSWA++ S+ + S S+ +LS R A C+S
Sbjct: 407 PSPPQQSVRDSRPLKRSWHSRMMVPIPRLSWAARPSVTSASSSGSKAAVLSSKRDALCTS 228
Query: 992 SNGDVT 1009
SN D T
Sbjct: 227 SNTDGT 210
Score = 57.4 bits (119), Expect(4) = 2e-049
Identities = 22/56 (39%), Positives = 32/56 (57%)
Frame = -1 / +1
Query: 735 IATKPADGAMINYVEGDMFSFIPPAQTXXXXXXXXXLTDEECVKLLAQCRKAIPSR 568
+ K ++NYV GD+F +P AQ +D++CVK+L QC+ AIPSR
Sbjct: 475 VIDKTPADGIVNYVGGDLFHTVPKAQAVMLKLVLHHWSDDDCVKILTQCKNAIPSR 642
Score = 56.1 bits (116), Expect(4) = 6e-037
Identities = 26/47 (55%), Positives = 30/47 (63%)
Frame = +2 / -3
Query: 569 REGIAFRH*ARSLTHSSSVRWCSTSFSTTV*AGGMKLNMSPST*FII 709
REG+AF H R T SSS++WC+TS S T *A G N SP T* I
Sbjct: 641 REGMAFLHWVRIFTQSSSLQWCNTSLSITA*AFGTVWNRSPPT*LTI 501
Score = 54.2 bits (112), Expect(4) = 2e-049
Identities = 23/34 (67%), Positives = 24/34 (70%)
Frame = -1 / +1
Query: 813 GDDKGARAIVKAFPHIKCTVLAPPKIIATKPADG 712
GD ARAI KA PHIKCTVL PK+I PADG
Sbjct: 400 GDGTTARAITKAHPHIKCTVLDLPKVIDKTPADG 501
Score = 51.0 bits (105), Expect(4) = 6e-037
Identities = 21/34 (61%), Positives = 27/34 (79%)
Frame = +2 / -3
Query: 713 PSAGLVAMILGGASTVHFMCGKALTMALAPLSSP 814
PSAG++++ LG +STVH MCG AL MALA + SP
Sbjct: 500 PSAGVLSITLGRSSTVHLMCGWALVMALAVVPSP 399
Score = 43.7 bits (89), Expect(4) = 6e-037
Identities = 23/44 (52%), Positives = 26/44 (59%)
Frame = +2 / -3
Query: 1013 SLLNHSASPIPASM*RVEVQVSTRAVWFMWSS*GMPSTRR*DTG 1144
S LN SA P ASM* +V ST+ VW SS PSTR D+G
Sbjct: 197 SFLNQSAMPSAASM*CRDVPASTKDVWLWCSSATTPSTRMRDSG 66
>gb|BF617976.2|BF617976 HVSMEc0002N19f Hordeum vulgare seedling shoot EST library HVcDNA0003
(Etiolated and unstressed) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEc0002N19f, mRNA sequence
Length = 543
Score = 112 bits (240), Expect(3) = 3e-049
Identities = 48/92 (52%), Positives = 66/92 (71%)
Frame = -1 / +1
Query: 1443 AMASEVVRPSDAELLKAQADIWRLSLSYLTPLSLRCAVELGIPTAIYRHGGAASAAELVT 1264
A A + P+DA+L++AQAD+WR SL +LT ++LRCAV+LGIPTAI+R GG S ++LVT
Sbjct: 4 AQAPTMAVPTDAQLIQAQADLWRHSLCHLTAIALRCAVQLGIPTAIHRLGGTTSVSDLVT 183
Query: 1263 ALSLPSAKLPFXXXXXXXLAASGVFTVDRQST 1168
ALSLP +K+P+ LAASG ++ T
Sbjct: 184 ALSLPQSKMPYLGRVLRLLAASGALASPKEGT 279
Score = 82.6 bits (174), Expect(3) = 1e-029
Identities = 44/81 (54%), Positives = 47/81 (58%)
Frame = +2 / -2
Query: 1178 LSTVNTPDAAXXXXXXXXNGSLAEGRDSAVTSSAAEAAPPWR*IAVGMPSSTAHLSDRGV 1357
L PDAA G L GRD+AVT S E PP R*IAVGMPS TAHLS V
Sbjct: 269 LGDAKAPDAANNRKTRPRYGILDCGRDNAVTRSDTEVVPPSR*IAVGMPSWTAHLSAMAV 90
Query: 1358 R*ERLSRHMSACAFSSSASLG 1420
R +L RH SACA S AS+G
Sbjct: 89 RWHKLWRHRSACA*ISWASVG 27
Score = 73.0 bits (153), Expect(3) = 3e-049
Identities = 29/59 (49%), Positives = 40/59 (67%)
Frame = -1 / +1
Query: 1173 STEEERYRISPVSYLLVDGIPHEDHMNHTALVLTCTSTRYIEAGIGLAEWFKRDVVTSP 997
S +E Y + P+SYLLVDG+ + + A+VLT TS YIEA +GLA+WFK+D+ P
Sbjct: 262 SPKEGTYSLVPLSYLLVDGVFIDGEASQKAIVLTTTSRHYIEAALGLADWFKKDIAPPP 438
Score = 53.3 bits (110), Expect(3) = 1e-029
Identities = 28/53 (52%), Positives = 32/53 (60%)
Frame = +2 / -2
Query: 986 SSSNGDVTTSLLNHSASPIPASM*RVEVQVSTRAVWFMWSS*GMPSTRR*DTG 1144
S+ +G S LN SASP ASM* +EV VST A W S PSTRR D+G
Sbjct: 449 SNGDGGGAMSFLNQSASPKAASM*CLEVVVSTMAFWLASPSMNTPSTRRYDSG 291
Score = 49.2 bits (101), Expect(3) = 3e-049
Identities = 21/35 (60%), Positives = 23/35 (65%)
Frame = -1 / +1
Query: 1002 SPFEELHGATLFHESMGSLDADFHDMASEALDAHD 898
SPFE++HGATLF ESM LD M EAL HD
Sbjct: 439 SPFEDVHGATLFEESMALLDPKSDKMFHEALACHD 543
Score = 32.7 bits (65), Expect(3) = 1e-029
Identities = 17/35 (48%), Positives = 21/35 (60%)
Frame = +2 / -2
Query: 899 SWASKASLAMSWKSASRLPMLSWNRVAPCSSSNGD 1003
SW +KAS + SR +LS VAP +SSNGD
Sbjct: 542 SWHAKASWNILSDFGSRSAILSSKSVAP*TSSNGD 438
>gb|CB879142.1|CB879142 HP11B09T HP Hordeum vulgare subsp. vulgare cDNA clone HP11B09
5-PRIME, mRNA sequence
Length = 562
Score = 90.4 bits (191), Expect(4) = 7e-049
Identities = 36/64 (56%), Positives = 46/64 (71%)
Frame = -1 / +2
Query: 1002 SPFEELHGATLFHESMGSLDADFHDMASEALDAHDNFGIEIAMREFRDLFEGIQSMTYCC 823
SPFE++HGATLF ESM LD + ++ EAL AHD+ GI +RE DLF+G+QS+T CC
Sbjct: 44 SPFEDVHGATLFEESMALLDPESDELFHEALAAHDHLGIGTILRECHDLFKGVQSLTDCC 223
Query: 822 GNFG 811
G G
Sbjct: 224 GGDG 235
Score = 82.6 bits (174), Expect(4) = 7e-049
Identities = 33/72 (45%), Positives = 46/72 (63%)
Frame = -1 / +2
Query: 735 IATKPADGAMINYVEGDMFSFIPPAQTXXXXXXXXXLTDEECVKLLAQCRKAIPSRKDGG 556
+ K ++NYV GD+F IPPAQ +DE+C+ +LAQC+KAIPSR+ GG
Sbjct: 302 VIEKVPSDGIVNYVAGDLFHAIPPAQVLMLKLVLHFWSDEDCINILAQCKKAIPSREMGG 481
Query: 555 KVIIGDIMIDHS 520
KVI+ DI++ S
Sbjct: 482 KVIVIDIVVGSS 517
Score = 73.0 bits (153), Expect(3) = 4e-032
Identities = 35/64 (54%), Positives = 41/64 (64%)
Frame = +2 / -2
Query: 812 PKLPQQ*VMDWIPSNKSLNSRIAISMPKLSWASKASLAMSWKSASRLPMLSWNRVAPCSS 991
P PQQ V DW P NKS +SR + +PK SWA+KAS S S SR +LS VAP +S
Sbjct: 234 PSPPQQSVSDWTPLNKSWHSRNIVPIPKWSWAAKASWNNSSDSGSRRAILSSKSVAP*TS 55
Query: 992 SNGD 1003
SNGD
Sbjct: 54 SNGD 43
Score = 57.9 bits (120), Expect(3) = 4e-032
Identities = 29/58 (50%), Positives = 36/58 (62%)
Frame = +1 / -1
Query: 529 NHNITDYNFPAILP*RNRLPALSQELDALLIGQVVQHKL*HDSLSRWNETEHVTFDIV 702
++ I D N RN L ALSQ +DA+ I VQ+KL H++LSRWN E VT DIV
Sbjct: 508 DYYIYDNNLSPHFAGRNGLLALSQNIDAIFITPEVQNKLKHENLSRWNSME*VTSDIV 335
Score = 55.6 bits (115), Expect(4) = 7e-049
Identities = 23/34 (67%), Positives = 25/34 (73%)
Frame = -1 / +2
Query: 813 GDDKGARAIVKAFPHIKCTVLAPPKIIATKPADG 712
GD ARAIVKAFPHIKC VL PK+I P+DG
Sbjct: 227 GDGTTARAIVKAFPHIKCNVLDLPKVIEKVPSDG 328
Score = 46.4 bits (95), Expect(3) = 4e-032
Identities = 18/34 (52%), Positives = 25/34 (73%)
Frame = +2 / -2
Query: 713 PSAGLVAMILGGASTVHFMCGKALTMALAPLSSP 814
PS G ++ G ++T+H +CGKALTMALA + SP
Sbjct: 327 PSLGTFSITFGRSNTLHLICGKALTMALAVVPSP 226
Score = 23.1 bits (44), Expect(4) = 7e-049
Identities = 6/14 (42%), Positives = 9/14 (64%)
Frame = -1 / +2
Query: 1038 GLAEWFKRDVVTSP 997
G +WFK+D+ P
Sbjct: 2 GTRDWFKKDITPPP 43
>gb|BI956453.1|BI956453 HVSMEn0003H10f Hordeum vulgare rachis EST library HVcDNA0015 (normal)
Hordeum vulgare subsp. vulgare cDNA clone HVSMEn0003H10f,
mRNA sequence
Length = 657
Score = 80.3 bits (169), Expect(5) = 7e-049
Identities = 31/66 (46%), Positives = 45/66 (68%)
Frame = -1 / +1
Query: 1008 VTSPFEELHGATLFHESMGSLDADFHDMASEALDAHDNFGIEIAMREFRDLFEGIQSMTY 829
V SPFE++HGA +F ESM LD + + +A+ AHD+ GI +R+ R+LFEG++S+T
Sbjct: 235 VPSPFEDVHGAAIFEESMALLDPEMDHLIHDAVSAHDHMGIGPVLRQCRELFEGLESLTN 414
Query: 828 CCGNFG 811
C G G
Sbjct: 415 CGGGDG 432
Score = 68.4 bits (143), Expect(5) = 7e-049
Identities = 26/54 (48%), Positives = 38/54 (70%)
Frame = -1 / +1
Query: 1173 STEEERYRISPVSYLLVDGIPHEDHMNHTALVLTCTSTRYIEAGIGLAEWFKRD 1012
ST+ YR++P+SYLLVDG+ + + TA+V S Y+EA +GLA+WFK+D
Sbjct: 61 STDAGTYRLNPLSYLLVDGVRIDGDASQTAIVRAAASRYYVEAAMGLADWFKKD 222
Score = 56.1 bits (116), Expect(5) = 7e-049
Identities = 20/49 (40%), Positives = 29/49 (59%)
Frame = -1 / +1
Query: 732 ATKPADGAMINYVEGDMFSFIPPAQTXXXXXXXXXLTDEECVKLLAQCR 586
A PA ++ YV GD+F +PPAQ +DE+C+K+LAQC+
Sbjct: 511 ALPPAQQGVVKYVSGDLFHVVPPAQAVLLKLVLHFWSDEDCIKILAQCK 657
Score = 55.6 bits (115), Expect(5) = 5e-034
Identities = 28/60 (46%), Positives = 34/60 (56%)
Frame = +1 / -1
Query: 820 TAAVGHGLDPLEQVPELPHSYLDAEVVVGVQGLARHVVEICVEAPHALVEQSRPVQLLER 999
TAAVG L PLEQ+ L D VVVG G+ +V + VE HAL+E V +LER
Sbjct: 423 TAAVGERLKPLEQLTALTEHGADPHVVVGRDGVVDEMVHLRVEERHALLEDGGAVHVLER 244
Score = 53.8 bits (111), Expect(4) = 3e-021
Identities = 30/66 (45%), Positives = 34/66 (51%)
Frame = +2 / -2
Query: 812 PKLPQQ*VMDWIPSNKSLNSRIAISMPKLSWASKASLAMSWKSASRLPMLSWNRVAPCSS 991
P P Q V D PSN S + R +P SWA AS S SR MLS APC+S
Sbjct: 431 PSPPPQLVRDSSPSNSSRH*RSTGPIPMWSWAETASWMRWSISGSRSAMLSSKMAAPCTS 252
Query: 992 SNGDVT 1009
SNG+ T
Sbjct: 251 SNGEGT 234
Score = 47.8 bits (98), Expect(5) = 5e-034
Identities = 26/53 (49%), Positives = 30/53 (56%)
Frame = +2 / -2
Query: 1013 SLLNHSASPIPASM*RVEVQVSTRAVWFMWSS*GMPSTRR*DTGLMRYRSSSV 1171
S LN SA P+ AS * E T AVW S PSTRR ++GL RY +SV
Sbjct: 221 SFLNQSARPMAAST**REAAARTMAVWLASPSMRTPSTRRYESGLRRYVPASV 63
Score = 46.4 bits (95), Expect(5) = 5e-034
Identities = 19/40 (47%), Positives = 28/40 (70%)
Frame = +1 / -1
Query: 589 ALSQELDALLIGQVVQHKL*HDSLSRWNETEHVTFDIVYH 708
AL ++LDA+L+ VQ+KL LSRW++ E VT +I+ H
Sbjct: 654 ALCEDLDAILVAPKVQNKLEQHGLSRWDDVEQVTRNILNH 535
Score = 42.3 bits (86), Expect(5) = 7e-049
Identities = 16/27 (59%), Positives = 21/27 (77%)
Frame = -1 / +1
Query: 813 GDDKGARAIVKAFPHIKCTVLAPPKII 733
GD AR+IV+A+PHI CTVL PK++
Sbjct: 424 GDGTTARSIVEAYPHINCTVLDLPKVM 504
Score = 41.8 bits (85), Expect(4) = 3e-021
Identities = 20/36 (55%), Positives = 22/36 (61%)
Frame = +2 / -2
Query: 590 H*ARSLTHSSSVRWCSTSFSTTV*AGGMKLNMSPST 697
H AR L SSS++ C TS S T *AGG N SP T
Sbjct: 653 HCARILMQSSSLQKCRTSLSNTA*AGGTTWNRSPET 546
Score = 35.0 bits (70), Expect(4) = 3e-021
Identities = 17/48 (35%), Positives = 21/48 (43%)
Frame = +1 / -1
Query: 1012 VPLEPLRQPYPRLDVARRGAGEHQSGXXXXXXXXXXXHQEVGHGADAV 1155
V LEP+ Q + RL V RG G H H+EV +AV
Sbjct: 222 VLLEPVGQAHGRLHVVARGRGAHDGRLAGVAVDADAVHEEVRERVEAV 79
Score = 34.5 bits (69), Expect(5) = 5e-034
Identities = 15/19 (78%), Positives = 15/19 (78%)
Frame = +1 / -1
Query: 1186 GEHARRGEEPQQAAEERQL 1242
GE ARRGE QQA EERQL
Sbjct: 60 GEDARRGELAQQAGEERQL 4
Score = 33.6 bits (67), Expect(5) = 5e-034
Identities = 15/29 (51%), Positives = 19/29 (65%)
Frame = +2 / -2
Query: 728 VAMILGGASTVHFMCGKALTMALAPLSSP 814
++M G +STV MCG A TM LA + SP
Sbjct: 509 LSMTFGRSSTVQLMCG*ASTMDLAVVPSP 423
Score = 26.3 bits (51), Expect(4) = 3e-021
Identities = 10/23 (43%), Positives = 12/23 (52%)
Frame = +3 / -3
Query: 744 EGPAQCILCVGRL*QWPWHPCHH 812
E A+C C GR +W CHH
Sbjct: 493 EDRARCS*CAGRPRRWTSPLCHH 425
Score = 22.1 bits (42), Expect(5) = 7e-049
Identities = 10/20 (50%), Positives = 12/20 (60%)
Frame = -1 / +1
Query: 1245 AKLPFXXXXXXXLAASGVFT 1186
+KLPF LA +GVFT
Sbjct: 1 SKLPFLARLLRQLATAGVFT 60
>gb|AV918653.1|AV918653 AV918653 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags21m09 3', mRNA sequence
Length = 628
Score = 90.4 bits (191), Expect(4) = 2e-048
Identities = 37/64 (57%), Positives = 45/64 (70%)
Frame = -1 / -3
Query: 1002 SPFEELHGATLFHESMGSLDADFHDMASEALDAHDNFGIEIAMREFRDLFEGIQSMTYCC 823
SPFE++HGATLF ESM LD + M EAL AHD+ GI +RE DLF+G+QS+T CC
Sbjct: 458 SPFEDVHGATLFEESMALLDPESDKMFHEALAAHDHLGIGTILRECHDLFKGVQSLTDCC 279
Query: 822 GNFG 811
G G
Sbjct: 278 GGDG 267
Score = 71.6 bits (150), Expect(4) = 1e-033
Identities = 34/64 (53%), Positives = 41/64 (64%)
Frame = +2 / +1
Query: 812 PKLPQQ*VMDWIPSNKSLNSRIAISMPKLSWASKASLAMSWKSASRLPMLSWNRVAPCSS 991
P PQQ V DW P NKS +SR + +PK SWA+KAS + S SR +LS VAP +S
Sbjct: 268 PSPPQQSVSDWTPLNKSWHSRNIVPIPKWSWAAKASWNILSDSGSRSAILSSKSVAP*TS 447
Query: 992 SNGD 1003
SNGD
Sbjct: 448 SNGD 459
Score = 71.2 bits (149), Expect(4) = 2e-048
Identities = 28/56 (50%), Positives = 38/56 (67%)
Frame = -1 / -3
Query: 1164 EERYRISPVSYLLVDGIPHEDHMNHTALVLTCTSTRYIEAGIGLAEWFKRDVVTSP 997
E Y + P+SYLLVDG+ + + A+VLT TS YIEA +GLA+WFK+D+ P
Sbjct: 626 EGTYSLVPLSYLLVDGVFIDGEASQKAIVLTTTSRHYIEAALGLADWFKKDIAPPP 459
Score = 55.6 bits (115), Expect(4) = 2e-048
Identities = 23/34 (67%), Positives = 25/34 (73%)
Frame = -1 / -3
Query: 813 GDDKGARAIVKAFPHIKCTVLAPPKIIATKPADG 712
GD ARAIVKAFPHIKC VL PK+I P+DG
Sbjct: 275 GDGTTARAIVKAFPHIKCNVLDLPKVIEKVPSDG 174
Score = 53.3 bits (110), Expect(4) = 1e-033
Identities = 28/53 (52%), Positives = 32/53 (60%)
Frame = +2 / +1
Query: 986 SSSNGDVTTSLLNHSASPIPASM*RVEVQVSTRAVWFMWSS*GMPSTRR*DTG 1144
S+ +G S LN SASP ASM* +EV VST A W S PSTRR D+G
Sbjct: 448 SNGDGGGAMSFLNQSASPKAASM*CLEVVVSTMAFWLASPSMNTPSTRRYDSG 606
Score = 46.4 bits (95), Expect(4) = 1e-033
Identities = 18/34 (52%), Positives = 25/34 (73%)
Frame = +2 / +1
Query: 713 PSAGLVAMILGGASTVHFMCGKALTMALAPLSSP 814
PS G ++ G ++T+H +CGKALTMALA + SP
Sbjct: 175 PSLGTFSITFGRSNTLHLICGKALTMALAVVPSP 276
Score = 33.1 bits (66), Expect(4) = 2e-048
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = -1 / -3
Query: 735 IATKPADGAMINYVEGDMFSFIPPAQ 658
+ K ++NYV GD+F IPPAQ
Sbjct: 200 VIEKVPSDGIVNYVAGDLFHAIPPAQ 123
Score = 28.1 bits (55), Expect(4) = 1e-033
Identities = 11/18 (61%), Positives = 14/18 (77%)
Frame = +1 / +3
Query: 649 HDSLSRWNETEHVTFDIV 702
H++LSRWN E VT +IV
Sbjct: 114 HENLSRWNGME*VTSNIV 167
>gb|BF260928.2|BF260928 HVSMEf0023E24f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEf0023E24f, mRNA sequence
Length = 729
Score = 82.2 bits (173), Expect(4) = 4e-048
Identities = 33/72 (45%), Positives = 46/72 (63%)
Frame = -1 / +1
Query: 735 IATKPADGAMINYVEGDMFSFIPPAQTXXXXXXXXXLTDEECVKLLAQCRKAIPSRKDGG 556
+ K ++NYV GD+F +PPAQ +DE+C+ +LAQC+KAIPSR+ GG
Sbjct: 487 VIDKVPSDGVVNYVAGDLFHTVPPAQAVMLKLVLHFWSDEDCINILAQCKKAIPSREMGG 666
Query: 555 KVIIGDIMIDHS 520
KVII DI++ S
Sbjct: 667 KVIIIDIVLGSS 702
Score = 79.0 bits (166), Expect(4) = 4e-048
Identities = 34/66 (51%), Positives = 42/66 (63%)
Frame = -1 / +1
Query: 1008 VTSPFEELHGATLFHESMGSLDADFHDMASEALDAHDNFGIEIAMREFRDLFEGIQSMTY 829
V SPFE +H A F ESM LD + + EAL AHD+ GI +RE R LF+G+QS+T
Sbjct: 223 VPSPFEHVHAAAPFDESMTLLDPETDKLFYEALAAHDHMGIGTVLRECRGLFDGLQSLTD 402
Query: 828 CCGNFG 811
CCG G
Sbjct: 403 CCGGDG 420
Score = 57.4 bits (119), Expect(4) = 4e-048
Identities = 22/53 (41%), Positives = 33/53 (62%)
Frame = -1 / +1
Query: 1170 TEEERYRISPVSYLLVDGIPHEDHMNHTALVLTCTSTRYIEAGIGLAEWFKRD 1012
TE Y ++P+SY+LVDG+ + L TS ++E+G+GLA+WFK D
Sbjct: 52 TEAGIYSLTPLSYILVDGVLIDGEARQVTFPLAVTSRYHMESGLGLADWFKND 210
Score = 57.0 bits (118), Expect(4) = 1e-031
Identities = 31/71 (43%), Positives = 39/71 (54%)
Frame = +2 / -2
Query: 812 PKLPQQ*VMDWIPSNKSLNSRIAISMPKLSWASKASLAMSWKSASRLPMLSWNRVAPCSS 991
P PQQ V D PSN+ +SR + +P SWA++AS S S MLS A C+
Sbjct: 419 PSPPQQSVSDCRPSNRPRHSRSTVPIPIWSWAARAS*NSLSVSGSSSVMLSSKGAAACTC 240
Query: 992 SNGDVTTSLLN 1024
SNGD T S L+
Sbjct: 239 SNGDGTGSKLS 207
Score = 51.0 bits (105), Expect(4) = 1e-031
Identities = 25/43 (58%), Positives = 29/43 (67%)
Frame = +2 / -2
Query: 572 EGIAFRH*ARSLTHSSSVRWCSTSFSTTV*AGGMKLNMSPST* 700
EG+AF H*AR L SSS++ C TS S T *AGG SP+T*
Sbjct: 650 EGMAFLH*ARMLMQSSSLQKCRTSLSITA*AGGTVWKRSPAT* 522
Score = 47.8 bits (98), Expect(4) = 1e-031
Identities = 18/37 (48%), Positives = 27/37 (72%)
Frame = +2 / -2
Query: 704 IIAPSAGLVAMILGGASTVHFMCGKALTMALAPLSSP 814
+ PS G +++ G ++T+H +CGKALTMALA + SP
Sbjct: 521 LTTPSLGTLSITFGRSNTLHLICGKALTMALAVVPSP 411
Score = 36.8 bits (74), Expect(4) = 1e-031
Identities = 21/45 (46%), Positives = 24/45 (53%)
Frame = +2 / -2
Query: 1013 SLLNHSASPIPASM*RVEVQVSTRAVWFMWSS*GMPSTRR*DTGL 1147
S LN SA P P SM* EV S + S PSTR *D+G+
Sbjct: 209 SFLNQSARPRPDSM*YREVTASGKVTCLASPSMSTPSTRM*DSGV 75
Score = 30.4 bits (60), Expect(4) = 4e-048
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = -2 / +2
Query: 815 SVMTRVPGPLSKPSHT*NALCWPLPR 738
+VM R GP S+PS +A+CW R
Sbjct: 410 AVMGRRQGPSSRPSRISSAMCWTSQR 487
>gb|BF260349.2|BF260349 HVSMEf0021M05f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEf0021M05f, mRNA sequence
Length = 543
Score = 127 bits (272), Expect(3) = 1e-047
Identities = 55/84 (65%), Positives = 68/84 (80%)
Frame = -1 / +1
Query: 1437 ASEVVRPSDAELLKAQADIWRLSLSYLTPLSLRCAVELGIPTAIYRHGGAASAAELVTAL 1258
A +V P+DAELL+AQ+D+WR SL YLTP+SLRCAV+LG+PTAI+R GGAAS +ELV AL
Sbjct: 52 AEKVFVPTDAELLQAQSDLWRHSLCYLTPMSLRCAVDLGVPTAIHRLGGAASPSELVAAL 231
Query: 1257 SLPSAKLPFXXXXXXXLAASGVFT 1186
SLP++KLPF LA +GVFT
Sbjct: 232 SLPASKLPFLARLLRQLATAGVFT 303
Score = 97.7 bits (207), Expect(3) = 9e-032
Identities = 48/84 (57%), Positives = 53/84 (63%)
Frame = +2 / -2
Query: 1187 VNTPDAAXXXXXXXXNGSLAEGRDSAVTSSAAEAAPPWR*IAVGMPSSTAHLSDRGVR*E 1366
V TP A NGSL GRD A TSS +AAPP R +AVG P STA SD GVR*+
Sbjct: 302 VKTPAVASWRSRRARNGSLDAGRDRAATSSDGDAAPPRRWMAVGTPRSTAQRSDMGVR*Q 123
Query: 1367 RLSRHMSACAFSSSASLGRTTSEA 1438
RL RH S CA+SSSAS+G T A
Sbjct: 122 RLWRHRSDCAWSSSASVGTNTFSA 51
Score = 67.0 bits (140), Expect(3) = 1e-047
Identities = 25/54 (46%), Positives = 38/54 (70%)
Frame = -1 / +1
Query: 1173 STEEERYRISPVSYLLVDGIPHEDHMNHTALVLTCTSTRYIEAGIGLAEWFKRD 1012
ST+ YR++P+SYLLVDG+ + + TA+V S Y+EA +GLA+WF++D
Sbjct: 304 STDAGTYRLNPLSYLLVDGVRIDGDASQTAIVRAAASRYYVEAAMGLADWFRKD 465
Score = 47.8 bits (98), Expect(3) = 9e-032
Identities = 26/53 (49%), Positives = 30/53 (56%)
Frame = +2 / -2
Query: 1013 SLLNHSASPIPASM*RVEVQVSTRAVWFMWSS*GMPSTRR*DTGLMRYRSSSV 1171
S LN SA P+ AS * E T AVW S PSTRR ++GL RY +SV
Sbjct: 464 SFLNQSARPMAAST**REAAARTMAVWLASPSMRTPSTRRYESGLRRYVPASV 306
Score = 35.0 bits (70), Expect(3) = 1e-047
Identities = 13/21 (61%), Positives = 16/21 (76%)
Frame = -1 / +1
Query: 1008 VTSPFEELHGATLFHESMGSL 946
V SPFE++HGA +F ESM L
Sbjct: 478 VPSPFEDVHGAAIFEESMALL 540
Score = 30.4 bits (60), Expect(3) = 9e-032
Identities = 13/22 (59%), Positives = 15/22 (68%)
Frame = +2 / -2
Query: 944 SRLPMLSWNRVAPCSSSNGDVT 1009
SR MLS APC+SSNG+ T
Sbjct: 542 SRSAMLSSKMAAPCTSSNGEGT 477
>gb|CB882435.1|CB882435 HL01N17w HL Hordeum vulgare subsp. vulgare cDNA clone HL01N17
3-PRIME, mRNA sequence
Length = 553
Score = 127 bits (272), Expect(3) = 2e-047
Identities = 55/84 (65%), Positives = 68/84 (80%)
Frame = -1 / +2
Query: 1437 ASEVVRPSDAELLKAQADIWRLSLSYLTPLSLRCAVELGIPTAIYRHGGAASAAELVTAL 1258
A +V P+DAELL+AQ+D+WR SL YLTP+SLRCAV+LG+PTAI+R GGAAS +ELV AL
Sbjct: 71 AEKVFVPTDAELLQAQSDLWRHSLCYLTPMSLRCAVDLGVPTAIHRLGGAASPSELVAAL 250
Query: 1257 SLPSAKLPFXXXXXXXLAASGVFT 1186
SLP++KLPF LA +GVFT
Sbjct: 251 SLPASKLPFLARLLRQLATAGVFT 322
Score = 97.7 bits (207), Expect(3) = 1e-030
Identities = 48/84 (57%), Positives = 53/84 (63%)
Frame = +2 / -2
Query: 1187 VNTPDAAXXXXXXXXNGSLAEGRDSAVTSSAAEAAPPWR*IAVGMPSSTAHLSDRGVR*E 1366
V TP A NGSL GRD A TSS +AAPP R +AVG P STA SD GVR*+
Sbjct: 321 VKTPAVASWRSRRARNGSLDAGRDRAATSSDGDAAPPRRWMAVGTPRSTAQRSDMGVR*Q 142
Query: 1367 RLSRHMSACAFSSSASLGRTTSEA 1438
RL RH S CA+SSSAS+G T A
Sbjct: 141 RLWRHRSDCAWSSSASVGTNTFSA 70
Score = 67.0 bits (140), Expect(3) = 2e-047
Identities = 25/54 (46%), Positives = 38/54 (70%)
Frame = -1 / +2
Query: 1173 STEEERYRISPVSYLLVDGIPHEDHMNHTALVLTCTSTRYIEAGIGLAEWFKRD 1012
ST+ YR++P+SYLLVDG+ + + TA+V S Y+EA +GLA+WF++D
Sbjct: 323 STDAGTYRLNPLSYLLVDGVRIDGDASQTAIVRAAASRYYVEAAMGLADWFRKD 484
Score = 46.9 bits (96), Expect(3) = 1e-030
Identities = 26/53 (49%), Positives = 29/53 (54%)
Frame = +2 / -2
Query: 1013 SLLNHSASPIPASM*RVEVQVSTRAVWFMWSS*GMPSTRR*DTGLMRYRSSSV 1171
S LN SA P+ AS * E T AVW S PSTRR + GL RY +SV
Sbjct: 483 SFLNQSARPMAAST**REAAARTMAVWLASPSMRTPSTRRYERGLRRYVPASV 325
Score = 34.1 bits (68), Expect(3) = 2e-047
Identities = 12/18 (66%), Positives = 15/18 (83%)
Frame = -1 / +2
Query: 1008 VTSPFEELHGATLFHESM 955
V SPFE++HGA +F ESM
Sbjct: 497 VPSPFEDVHGAAIFEESM 550
Score = 27.6 bits (54), Expect(3) = 1e-030
Identities = 11/18 (61%), Positives = 13/18 (72%)
Frame = +2 / -2
Query: 956 MLSWNRVAPCSSSNGDVT 1009
MLS APC+SSNG+ T
Sbjct: 549 MLSSKMAAPCTSSNGEGT 496
>gb|CD662493.1|CD662493 UCRHV18_01ch06_b1 Drought-stressed Dicktoo barley epidermis cDNA
library Hordeum vulgare subsp. vulgare cDNA clone
UCRHV18_01ch06, mRNA sequence
Length = 865
Score = 96.8 bits (205), Expect(4) = 3e-047
Identities = 40/73 (54%), Positives = 52/73 (71%)
Frame = -1 / -1
Query: 561 GGKVIIGDIMIDHSGPMLETHLLMDIGMMTMTKGRQRDEKEWSELFTKAGFSEYKILKEF 382
G ++I ++ S MLET LL+D+ M+ T+GRQRDE +WS +FTKAGFS YKI+K+
Sbjct: 508 GKVIVIDIVVGSSSKEMLETQLLVDMLMLVCTRGRQRDENDWSTIFTKAGFSGYKIVKKL 329
Query: 381 GARVAFEVYP*DC 343
G R EVYP*DC
Sbjct: 328 GPRGVIEVYP*DC 290
Score = 82.6 bits (174), Expect(3) = 9e-023
Identities = 33/72 (45%), Positives = 46/72 (63%)
Frame = -1 / -1
Query: 735 IATKPADGAMINYVEGDMFSFIPPAQTXXXXXXXXXLTDEECVKLLAQCRKAIPSRKDGG 556
+ K ++NYV GD+F IPPAQ +DE+C+ +LAQC+KAIPSR+ GG
Sbjct: 685 VIEKVPSDGIVNYVAGDLFHAIPPAQVLMLKLVLHFWSDEDCINILAQCKKAIPSREMGG 506
Query: 555 KVIIGDIMIDHS 520
KVI+ DI++ S
Sbjct: 505 KVIVIDIVVGSS 470
Score = 57.9 bits (120), Expect(4) = 3e-035
Identities = 29/58 (50%), Positives = 36/58 (62%)
Frame = +1 / +2
Query: 529 NHNITDYNFPAILP*RNRLPALSQELDALLIGQVVQHKL*HDSLSRWNETEHVTFDIV 702
++ I D N RN L ALSQ +DA+ I VQ+KL H++LSRWN E VT DIV
Sbjct: 479 DYYIYDNNLSPHFAGRNGLLALSQNIDAIFITPEVQNKLKHENLSRWNSME*VTSDIV 652
Score = 55.6 bits (115), Expect(4) = 3e-047
Identities = 23/34 (67%), Positives = 25/34 (73%)
Frame = -1 / -1
Query: 813 GDDKGARAIVKAFPHIKCTVLAPPKIIATKPADG 712
GD ARAIVKAFPHIKC VL PK+I P+DG
Sbjct: 760 GDGTTARAIVKAFPHIKCNVLDLPKVIEKVPSDG 659
Score = 54.2 bits (112), Expect(4) = 3e-047
Identities = 21/36 (58%), Positives = 26/36 (72%)
Frame = -1 / -1
Query: 918 EALDAHDNFGIEIAMREFRDLFEGIQSMTYCCGNFG 811
EAL AHD+ GI +RE DLF+G+QS+T CCG G
Sbjct: 859 EALAAHDHLGIGTILRECHDLFKGVQSLTDCCGGDG 752
Score = 51.5 bits (106), Expect(4) = 3e-035
Identities = 21/36 (58%), Positives = 25/36 (69%)
Frame = +2 / +3
Query: 812 PKLPQQ*VMDWIPSNKSLNSRIAISMPKLSWASKAS 919
P PQQ V DW P NKS +SR + +PK SWA+KAS
Sbjct: 753 PSPPQQSVSDWTPLNKSWHSRNIVPIPKWSWAAKAS 860
Score = 49.6 bits (102), Expect(4) = 3e-035
Identities = 28/63 (44%), Positives = 34/63 (53%)
Frame = +2 / +3
Query: 302 TYIYVCKYICIVQVQSHG*TSKATRAPNSFRILYSLNPALVKSSLHSFSSLCRPFVMVIM 481
T + + I + QS+G*TS R P+ IL LNPA VK L SFSS RP V M
Sbjct: 249 TTLNITHIIDALGTQSYG*TSMTPRGPSFLTIL*PLNPAFVKIVLQSFSSR*RPLVHTNM 428
Query: 482 PMS 490
+S
Sbjct: 429 SIS 437
Score = 46.4 bits (95), Expect(4) = 3e-035
Identities = 18/34 (52%), Positives = 25/34 (73%)
Frame = +2 / +3
Query: 713 PSAGLVAMILGGASTVHFMCGKALTMALAPLSSP 814
PS G ++ G ++T+H +CGKALTMALA + SP
Sbjct: 660 PSLGTFSITFGRSNTLHLICGKALTMALAVVPSP 761
Score = 39.6 bits (80), Expect(4) = 3e-047
Identities = 21/51 (41%), Positives = 28/51 (54%)
Frame = -3 / -3
Query: 700 LCRR*HVQFHSTCSNCRAKACAAPPDR*GVRQAPGSMPEGDSFTEGWRESY 548
LCR * + +STCS+ A AC+A + * + Q GSM EG S + Y
Sbjct: 650 LCRW*PIPCYSTCSSSHA*ACSALLE**RLHQYSGSMQEGHSVPRNGGKGY 498
Score = 34.1 bits (68), Expect(3) = 9e-023
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = -3 / -3
Query: 793 GHCQSLPTHKMHCAGPSQDHCHQTGRW 713
GHCQ LP +++ C GPS+ + W
Sbjct: 740 GHCQGLPAYQV*CVGPSEGDRESSK*W 660
Score = 28.6 bits (56), Expect(3) = 9e-023
Identities = 14/35 (40%), Positives = 21/35 (60%)
Frame = -3 / -3
Query: 505 NSPPDGHRHDDHDKRTAER*KRMERALHQSRVQRI 401
N G+ H KRT+ R*K +E L++SR+ R+
Sbjct: 452 NPTISGYAHVGMYKRTSTR*K*LEHNLYKSRI*RL 348
>gb|AV925163.1|AV925163 AV925163 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp. vulgare
cDNA clone basd22a15 5', mRNA sequence
Length = 546
Score = 110 bits (234), Expect(3) = 3e-047
Identities = 47/92 (51%), Positives = 65/92 (70%)
Frame = -1 / +3
Query: 1443 AMASEVVRPSDAELLKAQADIWRLSLSYLTPLSLRCAVELGIPTAIYRHGGAASAAELVT 1264
A A + P+DA+L++AQAD+WR SL +L ++LRCAV+LGIPTAI+R GG S ++LVT
Sbjct: 18 AQAPTMAVPTDAQLIQAQADLWRHSLCHLRAIALRCAVQLGIPTAIHRLGGTTSVSDLVT 197
Query: 1263 ALSLPSAKLPFXXXXXXXLAASGVFTVDRQST 1168
ALSLP +K+P+ LAASG ++ T
Sbjct: 198 ALSLPQSKMPYLGRVLRLLAASGALASPKEGT 293
Score = 81.3 bits (171), Expect(3) = 4e-028
Identities = 43/81 (53%), Positives = 47/81 (58%)
Frame = +2 / -3
Query: 1178 LSTVNTPDAAXXXXXXXXNGSLAEGRDSAVTSSAAEAAPPWR*IAVGMPSSTAHLSDRGV 1357
L PDAA G L GRD+AVT S E PP R*IAVGMPS TAHLS +
Sbjct: 283 LGDAKAPDAANNRKTRPRYGILDCGRDNAVTRSDTEVVPPSR*IAVGMPSWTAHLSAMAL 104
Query: 1358 R*ERLSRHMSACAFSSSASLG 1420
R +L RH SACA S AS+G
Sbjct: 103 RWHKLWRHRSACA*ISWASVG 41
Score = 73.0 bits (153), Expect(3) = 3e-047
Identities = 29/59 (49%), Positives = 40/59 (67%)
Frame = -1 / +3
Query: 1173 STEEERYRISPVSYLLVDGIPHEDHMNHTALVLTCTSTRYIEAGIGLAEWFKRDVVTSP 997
S +E Y + P+SYLLVDG+ + + A+VLT TS YIEA +GLA+WFK+D+ P
Sbjct: 276 SPKEGTYSLVPLSYLLVDGVFIDGEASQKAIVLTTTSRHYIEAALGLADWFKKDIAPPP 452
Score = 53.3 bits (110), Expect(3) = 4e-028
Identities = 28/53 (52%), Positives = 32/53 (60%)
Frame = +2 / -3
Query: 986 SSSNGDVTTSLLNHSASPIPASM*RVEVQVSTRAVWFMWSS*GMPSTRR*DTG 1144
S+ +G S LN SASP ASM* +EV VST A W S PSTRR D+G
Sbjct: 463 SNGDGGGAMSFLNQSASPKAASM*CLEVVVSTMAFWLASPSMNTPSTRRYDSG 305
Score = 45.1 bits (92), Expect(3) = 3e-047
Identities = 19/31 (61%), Positives = 22/31 (70%)
Frame = -1 / +3
Query: 1002 SPFEELHGATLFHESMGSLDADFHDMASEAL 910
SPFE++HGATLF ESM LD + M EAL
Sbjct: 453 SPFEDVHGATLFEESMALLDPESDKMFHEAL 545
Score = 29.0 bits (57), Expect(3) = 4e-028
Identities = 16/31 (51%), Positives = 19/31 (61%)
Frame = +2 / -3
Query: 911 KASLAMSWKSASRLPMLSWNRVAPCSSSNGD 1003
KAS + S SR +LS VAP +SSNGD
Sbjct: 544 KASWNILSDSGSRSAILSSKSVAP*TSSNGD 452
>gb|BF258405.3|BF258405 HVSMEf0015K05f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEf0015K05f, mRNA sequence
Length = 894
Score = 98.7 bits (209), Expect(4) = 4e-047
Identities = 42/71 (59%), Positives = 54/71 (76%)
Frame = -1 / +3
Query: 1443 AMASEVVRPSDAELLKAQADIWRLSLSYLTPLSLRCAVELGIPTAIYRHGGAASAAELVT 1264
A + + P+DA+L+KAQAD+ R SL+YLT ++LRCA+ELGIPTAI R GG AS +L+
Sbjct: 30 AQSQTMTVPTDAQLIKAQADLQRHSLTYLTSMALRCAIELGIPTAIQRLGGTASLPDLMA 209
Query: 1263 ALSLPSAKLPF 1231
ALSLP K PF
Sbjct: 210 ALSLPPPKAPF 242
Score = 76.2 bits (160), Expect(5) = 4e-032
Identities = 40/74 (54%), Positives = 43/74 (58%)
Frame = +2 / -3
Query: 1199 DAAXXXXXXXXNGSLAEGRDSAVTSSAAEAAPPWR*IAVGMPSSTAHLSDRGVR*ERLSR 1378
D A NG+L G DSA S +A PP R IAVGMPSS AHLS VR* RL R
Sbjct: 274 DLASSRRTRLRNGALGGGSDSAAIRSGKDAVPPRRWIAVGMPSSMAHLSAMDVR*VRLWR 95
Query: 1379 HMSACAFSSSASLG 1420
SACA S AS+G
Sbjct: 94 CRSACALISWASVG 53
Score = 57.9 bits (120), Expect(4) = 4e-047
Identities = 27/54 (50%), Positives = 32/54 (59%)
Frame = -1 / +3
Query: 1008 VTSPFEELHGATLFHESMGSLDADFHDMASEALDAHDNFGIEIAMREFRDLFEG 847
V SPFE +H A F ESM LD + + EAL AHD+ I +RE R LFEG
Sbjct: 462 VPSPFEHVHAAAPFDESMTLLDPETDKLFYEALAAHDHMXIGTVLRECRGLFEG 623
Score = 57.4 bits (119), Expect(4) = 4e-047
Identities = 22/53 (41%), Positives = 33/53 (62%)
Frame = -1 / +3
Query: 1170 TEEERYRISPVSYLLVDGIPHEDHMNHTALVLTCTSTRYIEAGIGLAEWFKRD 1012
TE Y ++P+SY+LVDG+ + L TS ++E+G+GLA+WFK D
Sbjct: 291 TEAGIYSLTPLSYILVDGVLIDGEARQVTFPLAVTSRYHMESGLGLADWFKND 449
Score = 43.7 bits (89), Expect(5) = 4e-032
Identities = 25/64 (39%), Positives = 34/64 (53%)
Frame = +2 / -3
Query: 833 VMDWIPSNKSLNSRIAISMPKLSWASKASLAMSWKSASRLPMLSWNRVAPCSSSNGDVTT 1012
V+ PSN+ +SR + + SWA++AS S S MLS A C+ SNGD T
Sbjct: 637 VVSMQPSNRPRHSRSTVPIXIWSWAARAS*NSLSVSGSSSVMLSSKGAAACTCSNGDGTG 458
Query: 1013 SLLN 1024
S L+
Sbjct: 457 SKLS 446
Score = 36.8 bits (74), Expect(5) = 4e-032
Identities = 21/45 (46%), Positives = 24/45 (53%)
Frame = +2 / -3
Query: 1013 SLLNHSASPIPASM*RVEVQVSTRAVWFMWSS*GMPSTRR*DTGL 1147
S LN SA P P SM* EV S + S PSTR *D+G+
Sbjct: 448 SFLNQSARPRPDSM*YREVTASGKVTCLASPSMSTPSTRM*DSGV 314
Score = 31.8 bits (63), Expect(4) = 4e-047
Identities = 12/13 (92%), Positives = 12/13 (92%)
Frame = -1 / +3
Query: 798 ARAIVKAFPHIKC 760
ARAIVKA PHIKC
Sbjct: 657 ARAIVKALPHIKC 695
Score = 31.8 bits (63), Expect(5) = 4e-032
Identities = 11/14 (78%), Positives = 14/14 (100%)
Frame = +2 / -3
Query: 758 VHFMCGKALTMALA 799
+HF+CG+ALTMALA
Sbjct: 697 MHFICGRALTMALA 656
Score = 23.1 bits (44), Expect(5) = 4e-032
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = +2 / -1
Query: 572 EGIAFRH*ARSLTHSSSVRWCSTSFSTTV*AGG 670
E F ++ + SSS++ C T+ S T *A G
Sbjct: 879 ERYGFSAMSKDVIPSSSLKKCRTALSITA*AVG 781
>gb|AV923580.1|AV923580 AV923580 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp. vulgare
cDNA clone basd13k11 5', mRNA sequence
Length = 515
Score = 108 bits (230), Expect(3) = 1e-046
Identities = 45/84 (53%), Positives = 62/84 (73%)
Frame = -1 / +2
Query: 1419 PSDAELLKAQADIWRLSLSYLTPLSLRCAVELGIPTAIYRHGGAASAAELVTALSLPSAK 1240
P+DA+L++AQAD+WR SL +L ++LRCAV+LGIPTAI+R GG S ++LVTALSLP +K
Sbjct: 8 PTDAQLIQAQADLWRHSLCHLRAIALRCAVQLGIPTAIHRLGGTTSVSDLVTALSLPQSK 187
Query: 1239 LPFXXXXXXXLAASGVFTVDRQST 1168
+P+ LAASG ++ T
Sbjct: 188 MPYLGRVLRLLAASGALASPKEGT 259
Score = 81.3 bits (171), Expect(3) = 3e-028
Identities = 43/81 (53%), Positives = 47/81 (58%)
Frame = +2 / -3
Query: 1178 LSTVNTPDAAXXXXXXXXNGSLAEGRDSAVTSSAAEAAPPWR*IAVGMPSSTAHLSDRGV 1357
L PDAA G L GRD+AVT S E PP R*IAVGMPS TAHLS +
Sbjct: 249 LGDAKAPDAANNRKTRPRYGILDCGRDNAVTRSDTEVVPPSR*IAVGMPSWTAHLSAMAL 70
Query: 1358 R*ERLSRHMSACAFSSSASLG 1420
R +L RH SACA S AS+G
Sbjct: 69 RWHKLWRHRSACA*ISWASVG 7
Score = 73.0 bits (153), Expect(3) = 1e-046
Identities = 29/59 (49%), Positives = 40/59 (67%)
Frame = -1 / +2
Query: 1173 STEEERYRISPVSYLLVDGIPHEDHMNHTALVLTCTSTRYIEAGIGLAEWFKRDVVTSP 997
S +E Y + P+SYLLVDG+ + + A+VLT TS YIEA +GLA+WFK+D+ P
Sbjct: 242 SPKEGTYSLVPLSYLLVDGVFIDGEASQKAIVLTTTSRHYIEAALGLADWFKKDIAPPP 418
Score = 53.3 bits (110), Expect(3) = 3e-028
Identities = 28/53 (52%), Positives = 32/53 (60%)
Frame = +2 / -3
Query: 986 SSSNGDVTTSLLNHSASPIPASM*RVEVQVSTRAVWFMWSS*GMPSTRR*DTG 1144
S+ +G S LN SASP ASM* +EV VST A W S PSTRR D+G
Sbjct: 429 SNGDGGGAMSFLNQSASPKAASM*CLEVVVSTMAFWLASPSMNTPSTRRYDSG 271
Score = 45.1 bits (92), Expect(3) = 1e-046
Identities = 19/31 (61%), Positives = 22/31 (70%)
Frame = -1 / +2
Query: 1002 SPFEELHGATLFHESMGSLDADFHDMASEAL 910
SPFE++HGATLF ESM LD + M EAL
Sbjct: 419 SPFEDVHGATLFEESMALLDPESDKMFHEAL 511
Score = 29.5 bits (58), Expect(3) = 3e-028
Identities = 16/32 (50%), Positives = 20/32 (62%)
Frame = +2 / -3
Query: 908 SKASLAMSWKSASRLPMLSWNRVAPCSSSNGD 1003
+KAS + S SR +LS VAP +SSNGD
Sbjct: 513 AKASWNILSDSGSRSAILSSKSVAP*TSSNGD 418
>gb|BQ765268.1|BQ765268 EBro03_SQ006_N17_R root, 3 week, waterlogged, cv Optic, EBro03
Hordeum vulgare subsp. vulgare cDNA clone
EBro03_SQ006_N17 5', mRNA sequence
Length = 615
Score = 83.5 bits (176), Expect(4) = 5e-046
Identities = 31/65 (47%), Positives = 44/65 (67%)
Frame = -1 / +3
Query: 723 PADGAMINYVEGDMFSFIPPAQTXXXXXXXXXLTDEECVKLLAQCRKAIPSRKDGGKVII 544
PA ++ YV GD+F +PPAQ +DE+C+K+LAQCRKA+P R+ GGKVI+
Sbjct: 300 PAQQGVVKYVSGDLFHVVPPAQAVLLKLVLHFWSDEDCIKILAQCRKAVPPREAGGKVIV 479
Query: 543 GDIMI 529
DI++
Sbjct: 480 IDIVL 494
Score = 79.4 bits (167), Expect(4) = 5e-046
Identities = 31/66 (46%), Positives = 45/66 (68%)
Frame = -1 / +3
Query: 1008 VTSPFEELHGATLFHESMGSLDADFHDMASEALDAHDNFGIEIAMREFRDLFEGIQSMTY 829
V SPFE++HGA +F ESM LD + + +A+ AHD+ GI +R+ R+LFEG++S+T
Sbjct: 15 VPSPFEDVHGAAIFEESMALLDPEMDQLIHDAVAAHDHMGIGPVLRQCRELFEGLESLTD 194
Query: 828 CCGNFG 811
C G G
Sbjct: 195 CGGGDG 212
Score = 68.0 bits (142), Expect(4) = 5e-033
Identities = 28/59 (47%), Positives = 40/59 (67%)
Frame = +1 / -2
Query: 532 HNITDYNFPAILP*RNRLPALSQELDALLIGQVVQHKL*HDSLSRWNETEHVTFDIVYH 708
HN+ D +FP+ RN LPAL ++LDA+L+ VQ+KL LSRW++ E VT +I+ H
Sbjct: 491 HNVYDDDFPSCFTWRNGLPALCEDLDAILVAPEVQNKLEQHGLSRWDDVEQVTRNILNH 315
Score = 56.1 bits (116), Expect(4) = 5e-033
Identities = 28/60 (46%), Positives = 34/60 (56%)
Frame = +1 / -2
Query: 820 TAAVGHGLDPLEQVPELPHSYLDAEVVVGVQGLARHVVEICVEAPHALVEQSRPVQLLER 999
TAAVG L PLEQ+ L D VVVG G+ +V + VE HAL+E V +LER
Sbjct: 203 TAAVGERLKPLEQLTALTEHGADPHVVVGSDGVVDELVHLRVEERHALLEDGGAVHVLER 24
Score = 54.2 bits (112), Expect(4) = 5e-025
Identities = 30/66 (45%), Positives = 35/66 (53%)
Frame = +2 / -3
Query: 812 PKLPQQ*VMDWIPSNKSLNSRIAISMPKLSWASKASLAMSWKSASRLPMLSWNRVAPCSS 991
P P Q V D PSN S + R +P SWA+ AS S SR MLS APC+S
Sbjct: 211 PSPPPQSVRDSSPSNSSRH*RSTGPIPMWSWAATASWMSWSISGSRSAMLSSKMAAPCTS 32
Query: 992 SNGDVT 1009
SNG+ T
Sbjct: 31 SNGEGT 14
Score = 49.2 bits (101), Expect(4) = 5e-025
Identities = 24/43 (55%), Positives = 26/43 (60%)
Frame = +2 / -3
Query: 569 REGIAFRH*ARSLTHSSSVRWCSTSFSTTV*AGGMKLNMSPST 697
R G AF H AR L SSS++ C TS S T *AGG N SP T
Sbjct: 454 RGGTAFLHCARILMQSSSLQKCRTSLSNTA*AGGTTWNRSPET 326
Score = 42.3 bits (86), Expect(4) = 5e-046
Identities = 16/27 (59%), Positives = 21/27 (77%)
Frame = -1 / +3
Query: 813 GDDKGARAIVKAFPHIKCTVLAPPKII 733
GD AR+IV+A+PHI CTVL PK++
Sbjct: 204 GDGTTARSIVEAYPHINCTVLDLPKVM 284
Score = 40.0 bits (81), Expect(4) = 5e-033
Identities = 17/28 (60%), Positives = 20/28 (71%)
Frame = +2 / -3
Query: 413 PALVKSSLHSFSSLCRPFVMVIMPMSIR 496
PALVK S SFSS CRP V+ M +S+R
Sbjct: 613 PALVKISFQSFSSRCRPLVITSMSISMR 530
Score = 36.8 bits (74), Expect(4) = 5e-046
Identities = 15/34 (44%), Positives = 19/34 (55%)
Frame = -3 / +2
Query: 520 WAYAGNSPPDGHRHDDHDKRTAER*KRMERALHQ 419
WA AGN P G+ H D+R + +ER LHQ
Sbjct: 506 WANAGNPAPHGYAHAGDDERPTAGREGLERDLHQ 607
Score = 36.3 bits (73), Expect(4) = 5e-025
Identities = 13/34 (38%), Positives = 18/34 (52%)
Frame = +1 / -2
Query: 421 GEELAPFFFISLPSFCHGHHADVHQEVSFQHRPR 522
GE+L P L + H H +H+ + FQH PR
Sbjct: 605 GEDLVPVLLFPLSASRHHQHEHIHEVLGFQHWPR 504
Score = 33.6 bits (67), Expect(4) = 5e-033
Identities = 15/29 (51%), Positives = 19/29 (65%)
Frame = +2 / -3
Query: 728 VAMILGGASTVHFMCGKALTMALAPLSSP 814
++M G +STV MCG A TM LA + SP
Sbjct: 289 LSMTFGRSSTVQLMCG*ASTMDLAVVPSP 203
Score = 30.4 bits (60), Expect(4) = 5e-025
Identities = 11/23 (47%), Positives = 13/23 (56%)
Frame = +3 / -1
Query: 744 EGPAQCILCVGRL*QWPWHPCHH 812
EG A+C C GR +W CHH
Sbjct: 273 EGRARCS*CAGRPRRWTSPSCHH 205
>gb|AV914623.1|AV914623 AV914623 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags7e03 5', mRNA sequence
Length = 536
Score = 110 bits (234), Expect(3) = 1e-045
Identities = 47/92 (51%), Positives = 65/92 (70%)
Frame = -1 / +3
Query: 1443 AMASEVVRPSDAELLKAQADIWRLSLSYLTPLSLRCAVELGIPTAIYRHGGAASAAELVT 1264
A A + P+DA+L++AQAD+WR SL +L ++LRCAV+LGIPTAI+R GG S ++LVT
Sbjct: 42 AQAPTMAVPTDAQLIQAQADLWRHSLCHLRAIALRCAVQLGIPTAIHRLGGTTSVSDLVT 221
Query: 1263 ALSLPSAKLPFXXXXXXXLAASGVFTVDRQST 1168
ALSLP +K+P+ LAASG ++ T
Sbjct: 222 ALSLPQSKMPYLGRVLRLLAASGALASPKEGT 317
Score = 81.3 bits (171), Expect(3) = 5e-027
Identities = 43/81 (53%), Positives = 47/81 (58%)
Frame = +2 / -2
Query: 1178 LSTVNTPDAAXXXXXXXXNGSLAEGRDSAVTSSAAEAAPPWR*IAVGMPSSTAHLSDRGV 1357
L PDAA G L GRD+AVT S E PP R*IAVGMPS TAHLS +
Sbjct: 307 LGDAKAPDAANNRKTRPRYGILDCGRDNAVTRSDTEVVPPSR*IAVGMPSWTAHLSAMAL 128
Query: 1358 R*ERLSRHMSACAFSSSASLG 1420
R +L RH SACA S AS+G
Sbjct: 127 RWHKLWRHRSACA*ISWASVG 65
Score = 73.0 bits (153), Expect(3) = 1e-045
Identities = 29/59 (49%), Positives = 40/59 (67%)
Frame = -1 / +3
Query: 1173 STEEERYRISPVSYLLVDGIPHEDHMNHTALVLTCTSTRYIEAGIGLAEWFKRDVVTSP 997
S +E Y + P+SYLLVDG+ + + A+VLT TS YIEA +GLA+WFK+D+ P
Sbjct: 300 SPKEGTYSLVPLSYLLVDGVFIDGEASQKAIVLTTTSRHYIEAALGLADWFKKDIAPPP 476
Score = 53.3 bits (110), Expect(3) = 5e-027
Identities = 28/53 (52%), Positives = 32/53 (60%)
Frame = +2 / -2
Query: 986 SSSNGDVTTSLLNHSASPIPASM*RVEVQVSTRAVWFMWSS*GMPSTRR*DTG 1144
S+ +G S LN SASP ASM* +EV VST A W S PSTRR D+G
Sbjct: 487 SNGDGGGAMSFLNQSASPKAASM*CLEVVVSTMAFWLASPSMNTPSTRRYDSG 329
Score = 39.6 bits (80), Expect(3) = 1e-045
Identities = 15/20 (75%), Positives = 17/20 (85%)
Frame = -1 / +3
Query: 1002 SPFEELHGATLFHESMGSLD 943
SPFE++HGATLF ESM LD
Sbjct: 477 SPFEDVHGATLFEESMALLD 536
Score = 25.4 bits (49), Expect(3) = 5e-027
Identities = 12/20 (60%), Positives = 14/20 (70%)
Frame = +2 / -2
Query: 944 SRLPMLSWNRVAPCSSSNGD 1003
SR +LS VAP +SSNGD
Sbjct: 535 SRSAILSSKSVAP*TSSNGD 476
>gb|BF257368.2|BF257368 HVSMEf0012L06f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEf0012L06f, mRNA sequence
Length = 539
Score = 127 bits (272), Expect(3) = 2e-045
Identities = 55/84 (65%), Positives = 68/84 (80%)
Frame = -1 / +3
Query: 1437 ASEVVRPSDAELLKAQADIWRLSLSYLTPLSLRCAVELGIPTAIYRHGGAASAAELVTAL 1258
A +V P+DAELL+AQ+D+WR SL YLTP+SLRCAV+LG+PTAI+R GGAAS +ELV AL
Sbjct: 66 AEKVFVPTDAELLQAQSDLWRHSLCYLTPMSLRCAVDLGVPTAIHRLGGAASPSELVAAL 245
Query: 1257 SLPSAKLPFXXXXXXXLAASGVFT 1186
SLP++KLPF LA +GVFT
Sbjct: 246 SLPASKLPFLARLLRQLATAGVFT 317
Score = 97.7 bits (207), Expect(3) = 9e-030
Identities = 48/84 (57%), Positives = 53/84 (63%)
Frame = +2 / -2
Query: 1187 VNTPDAAXXXXXXXXNGSLAEGRDSAVTSSAAEAAPPWR*IAVGMPSSTAHLSDRGVR*E 1366
V TP A NGSL GRD A TSS +AAPP R +AVG P STA SD GVR*+
Sbjct: 316 VKTPAVASWRSRRARNGSLDAGRDRAATSSDGDAAPPRRWMAVGTPRSTAQRSDMGVR*Q 137
Query: 1367 RLSRHMSACAFSSSASLGRTTSEA 1438
RL RH S CA+SSSAS+G T A
Sbjct: 136 RLWRHRSDCAWSSSASVGTNTFSA 65
Score = 67.0 bits (140), Expect(3) = 2e-045
Identities = 25/54 (46%), Positives = 38/54 (70%)
Frame = -1 / +3
Query: 1173 STEEERYRISPVSYLLVDGIPHEDHMNHTALVLTCTSTRYIEAGIGLAEWFKRD 1012
ST+ YR++P+SYLLVDG+ + + TA+V S Y+EA +GLA+WF++D
Sbjct: 318 STDAGTYRLNPLSYLLVDGVRIDGDASQTAIVRAAASRYYVEAAMGLADWFRKD 479
Score = 47.8 bits (98), Expect(3) = 9e-030
Identities = 26/53 (49%), Positives = 30/53 (56%)
Frame = +2 / -2
Query: 1013 SLLNHSASPIPASM*RVEVQVSTRAVWFMWSS*GMPSTRR*DTGLMRYRSSSV 1171
S LN SA P+ AS * E T AVW S PSTRR ++GL RY +SV
Sbjct: 478 SFLNQSARPMAAST**REAAARTMAVWLASPSMRTPSTRRYESGLRRYVPASV 320
Score = 27.6 bits (54), Expect(3) = 2e-045
Identities = 9/14 (64%), Positives = 12/14 (85%)
Frame = -1 / +3
Query: 1008 VTSPFEELHGATLF 967
V SPFE++HGA +F
Sbjct: 492 VPSPFEDVHGAAIF 533
Score = 23.5 bits (45), Expect(3) = 9e-030
Identities = 8/11 (72%), Positives = 10/11 (90%)
Frame = +2 / -2
Query: 977 APCSSSNGDVT 1009
APC+SSNG+ T
Sbjct: 523 APCTSSNGEGT 491
>gb|AL504415.1|AL504415 AL504415 Hordeum vulgare Barke roots Hordeum vulgare subsp. vulgare
cDNA clone HW05D13V 5', mRNA sequence
Length = 684
Score = 79.9 bits (168), Expect(4) = 8e-045
Identities = 30/65 (46%), Positives = 43/65 (66%)
Frame = -1 / +1
Query: 723 PADGAMINYVEGDMFSFIPPAQTXXXXXXXXXLTDEECVKLLAQCRKAIPSRKDGGKVII 544
PA ++ YV GD+F +PPAQ +DE+C+K+LAQCRKA+P R+ GKVI+
Sbjct: 376 PAQQGVVKYVXGDLFHVVPPAQAVLLKLVLHFWSDEDCIKILAQCRKAVPPREAXGKVIV 555
Query: 543 GDIMI 529
DI++
Sbjct: 556 IDIVL 570
Score = 79.4 bits (167), Expect(4) = 8e-045
Identities = 31/66 (46%), Positives = 45/66 (68%)
Frame = -1 / +1
Query: 1008 VTSPFEELHGATLFHESMGSLDADFHDMASEALDAHDNFGIEIAMREFRDLFEGIQSMTY 829
V SPFE++HGA +F ESM LD + + +A+ AHD+ GI +R+ R+LFEG++S+T
Sbjct: 91 VPSPFEDVHGAAIFEESMALLDPEMDQLIHDAVAAHDHMGIGPVLRQCRELFEGLESLTD 270
Query: 828 CCGNFG 811
C G G
Sbjct: 271 CGGGDG 288
Score = 67.5 bits (141), Expect(4) = 1e-028
Identities = 28/59 (47%), Positives = 39/59 (66%)
Frame = +1 / -1
Query: 532 HNITDYNFPAILP*RNRLPALSQELDALLIGQVVQHKL*HDSLSRWNETEHVTFDIVYH 708
HN+ D +FP+ RN LPAL ++LDA+L+ VQ+KL LSRW+ E VT +I+ H
Sbjct: 567 HNVYDDDFPSCFTWRNGLPALCEDLDAILVAPEVQNKLEQHGLSRWDXVEQVTXNILNH 391
Score = 56.1 bits (116), Expect(4) = 1e-028
Identities = 28/60 (46%), Positives = 34/60 (56%)
Frame = +1 / -1
Query: 820 TAAVGHGLDPLEQVPELPHSYLDAEVVVGVQGLARHVVEICVEAPHALVEQSRPVQLLER 999
TAAVG L PLEQ+ L D VVVG G+ +V + VE HAL+E V +LER
Sbjct: 279 TAAVGERLKPLEQLTALTEHGADPHVVVGSDGVVDELVHLRVEERHALLEDGGAVHVLER 100
Score = 42.3 bits (86), Expect(4) = 8e-045
Identities = 16/27 (59%), Positives = 21/27 (77%)
Frame = -1 / +1
Query: 813 GDDKGARAIVKAFPHIKCTVLAPPKII 733
GD AR+IV+A+PHI CTVL PK++
Sbjct: 280 GDGTTARSIVEAYPHINCTVLDLPKVM 360
Score = 36.3 bits (73), Expect(4) = 8e-045
Identities = 13/26 (50%), Positives = 18/26 (69%)
Frame = -1 / +1
Query: 1089 TALVLTCTSTRYIEAGIGLAEWFKRD 1012
TA+V S Y EA +GLA+WF++D
Sbjct: 1 TAIVRAAASRYYXEAAMGLADWFRKD 78
Score = 33.6 bits (67), Expect(4) = 1e-028
Identities = 15/29 (51%), Positives = 19/29 (65%)
Frame = +2 / -2
Query: 728 VAMILGGASTVHFMCGKALTMALAPLSSP 814
++M G +STV MCG A TM LA + SP
Sbjct: 365 LSMTFGRSSTVQLMCG*ASTMDLAVVPSP 279
Score = 25.4 bits (49), Expect(4) = 1e-028
Identities = 10/20 (50%), Positives = 12/20 (60%)
Frame = +1 / -1
Query: 1021 EPLRQPYPRLDVARRGAGEH 1080
EP+ Q + RL V RG G H
Sbjct: 69 EPVGQAHGRLXVVARGRGAH 10
>gb|BF628372.2|BF628372 HVSMEb0003N17f Hordeum vulgare seedling shoot EST library HVcDNA0002
(Dehydration stress) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEb0003N17f, mRNA sequence
Length = 521
Score = 109 bits (232), Expect(3) = 2e-044
Identities = 47/92 (51%), Positives = 64/92 (69%)
Frame = -1 / +3
Query: 1443 AMASEVVRPSDAELLKAQADIWRLSLSYLTPLSLRCAVELGIPTAIYRHGGAASAAELVT 1264
A A + P+DA+L++AQAD+WR SL +L + LRCAV+LGIPTAI+R GG S ++LVT
Sbjct: 30 AQAPTMAVPTDAQLIQAQADLWRHSLCHLRAIPLRCAVQLGIPTAIHRLGGTTSVSDLVT 209
Query: 1263 ALSLPSAKLPFXXXXXXXLAASGVFTVDRQST 1168
ALSLP +K+P+ LAASG ++ T
Sbjct: 210 ALSLPQSKMPYLGRVLRLLAASGALASPKEGT 305
Score = 81.7 bits (172), Expect(3) = 1e-026
Identities = 43/81 (53%), Positives = 47/81 (58%)
Frame = +2 / -2
Query: 1178 LSTVNTPDAAXXXXXXXXNGSLAEGRDSAVTSSAAEAAPPWR*IAVGMPSSTAHLSDRGV 1357
L PDAA G L GRD+AVT S E PP R*IAVGMPS TAHLS +
Sbjct: 295 LGDAKAPDAANNRKTRPRYGILDCGRDNAVTRSDTEVVPPSR*IAVGMPSWTAHLSGMAL 116
Query: 1358 R*ERLSRHMSACAFSSSASLG 1420
R +L RH SACA S AS+G
Sbjct: 115 RWHKLWRHRSACA*ISWASVG 53
Score = 73.0 bits (153), Expect(3) = 2e-044
Identities = 29/59 (49%), Positives = 40/59 (67%)
Frame = -1 / +3
Query: 1173 STEEERYRISPVSYLLVDGIPHEDHMNHTALVLTCTSTRYIEAGIGLAEWFKRDVVTSP 997
S +E Y + P+SYLLVDG+ + + A+VLT TS YIEA +GLA+WFK+D+ P
Sbjct: 288 SPKEGTYSLVPLSYLLVDGVFIDGEASQKAIVLTTTSRHYIEAALGLADWFKKDIAPPP 464
Score = 53.3 bits (110), Expect(3) = 1e-026
Identities = 28/53 (52%), Positives = 32/53 (60%)
Frame = +2 / -2
Query: 986 SSSNGDVTTSLLNHSASPIPASM*RVEVQVSTRAVWFMWSS*GMPSTRR*DTG 1144
S+ +G S LN SASP ASM* +EV VST A W S PSTRR D+G
Sbjct: 475 SNGDGGGAMSFLNQSASPKAASM*CLEVVVSTMAFWLASPSMNTPSTRRYDSG 317
Score = 36.8 bits (74), Expect(3) = 2e-044
Identities = 14/19 (73%), Positives = 16/19 (84%)
Frame = -1 / +3
Query: 1002 SPFEELHGATLFHESMGSL 946
SPFE++HGATLF ESM L
Sbjct: 465 SPFEDVHGATLFEESMALL 521
Score = 23.5 bits (45), Expect(3) = 1e-026
Identities = 11/19 (57%), Positives = 13/19 (68%)
Frame = +2 / -2
Query: 947 RLPMLSWNRVAPCSSSNGD 1003
R +LS VAP +SSNGD
Sbjct: 520 RSAILSSKSVAP*TSSNGD 464
>gb|AV919708.1|AV919708 AV919708 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags7e03 3', mRNA sequence
Length = 624
Score = 90.4 bits (191), Expect(4) = 3e-044
Identities = 37/64 (57%), Positives = 45/64 (70%)
Frame = -1 / -1
Query: 1002 SPFEELHGATLFHESMGSLDADFHDMASEALDAHDNFGIEIAMREFRDLFEGIQSMTYCC 823
SPFE++HGATLF ESM LD + M EAL AHD+ GI +RE DLF+G+QS+T CC
Sbjct: 474 SPFEDVHGATLFEESMALLDPESDKMFHEALAAHDHLGIGTILRECHDLFKGVQSLTDCC 295
Query: 822 GNFG 811
G G
Sbjct: 294 GGDG 283
Score = 71.6 bits (150), Expect(4) = 3e-031
Identities = 34/64 (53%), Positives = 41/64 (64%)
Frame = +2 / +2
Query: 812 PKLPQQ*VMDWIPSNKSLNSRIAISMPKLSWASKASLAMSWKSASRLPMLSWNRVAPCSS 991
P PQQ V DW P NKS +SR + +PK SWA+KAS + S SR +LS VAP +S
Sbjct: 284 PSPPQQSVSDWTPLNKSWHSRNIVPIPKWSWAAKASWNILSDSGSRSAILSSKSVAP*TS 463
Query: 992 SNGD 1003
SNGD
Sbjct: 464 SNGD 475
Score = 57.0 bits (118), Expect(4) = 3e-044
Identities = 22/44 (50%), Positives = 30/44 (68%)
Frame = -1 / -1
Query: 1128 LVDGIPHEDHMNHTALVLTCTSTRYIEAGIGLAEWFKRDVVTSP 997
LVDG+ + + A+VLT TS YIEA +GLA+WFK+D+ P
Sbjct: 606 LVDGVFIDGEASQKAIVLTTTSRHYIEAALGLADWFKKDIAPPP 475
Score = 55.6 bits (115), Expect(4) = 3e-044
Identities = 23/34 (67%), Positives = 25/34 (73%)
Frame = -1 / -1
Query: 813 GDDKGARAIVKAFPHIKCTVLAPPKIIATKPADG 712
GD ARAIVKAFPHIKC VL PK+I P+DG
Sbjct: 291 GDGTTARAIVKAFPHIKCNVLDLPKVIEKVPSDG 190
Score = 46.4 bits (95), Expect(4) = 3e-031
Identities = 18/34 (52%), Positives = 25/34 (73%)
Frame = +2 / +2
Query: 713 PSAGLVAMILGGASTVHFMCGKALTMALAPLSSP 814
PS G ++ G ++T+H +CGKALTMALA + SP
Sbjct: 191 PSLGTFSITFGRSNTLHLICGKALTMALAVVPSP 292
Score = 45.5 bits (93), Expect(4) = 3e-031
Identities = 24/48 (50%), Positives = 28/48 (58%)
Frame = +2 / +2
Query: 986 SSSNGDVTTSLLNHSASPIPASM*RVEVQVSTRAVWFMWSS*GMPSTR 1129
S+ +G S LN SASP ASM* +EV VST A W S PST+
Sbjct: 464 SNGDGGGAMSFLNQSASPKAASM*CLEVVVSTMAFWLASPSMNTPSTK 607
Score = 33.1 bits (66), Expect(4) = 3e-044
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = -1 / -1
Query: 735 IATKPADGAMINYVEGDMFSFIPPAQ 658
+ K ++NYV GD+F IPPAQ
Sbjct: 216 VIEKVPSDGIVNYVAGDLFHAIPPAQ 139
Score = 28.1 bits (55), Expect(4) = 3e-031
Identities = 11/18 (61%), Positives = 14/18 (77%)
Frame = +1 / +1
Query: 649 HDSLSRWNETEHVTFDIV 702
H++LSRWN E VT +IV
Sbjct: 130 HENLSRWNGME*VTSNIV 183
>gb|AV918157.1|AV918157 AV918157 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags20b03 3', mRNA sequence
Length = 676
Score = 79.4 bits (167), Expect(5) = 1e-043
Identities = 30/72 (41%), Positives = 46/72 (63%)
Frame = -1 / -1
Query: 735 IATKPADGAMINYVEGDMFSFIPPAQTXXXXXXXXXLTDEECVKLLAQCRKAIPSRKDGG 556
+ K ++NYV GD+F +P AQ +D++CVK+L QC+ AIPSR++GG
Sbjct: 532 VIEKTPSDCVVNYVAGDLFHTVPKAQAVMLKLVLHHWSDDDCVKILTQCKNAIPSREEGG 353
Query: 555 KVIIGDIMIDHS 520
KVI+ DI+++ S
Sbjct: 352 KVIVIDIVVEPS 317
Score = 76.2 bits (160), Expect(5) = 1e-043
Identities = 29/53 (54%), Positives = 38/53 (71%)
Frame = -1 / -1
Query: 513 MLETHLLMDIGMMTMTKGRQRDEKEWSELFTKAGFSEYKILKEFGARVAFEVY 355
M E LMD+ M+ T+GRQR E +W +LF KAGF++YKI+K+ GAR EVY
Sbjct: 304 MFEAQTLMDMLMLVFTRGRQRSENDWRDLFMKAGFTDYKIIKKMGARGVIEVY 146
Score = 37.3 bits (75), Expect(5) = 1e-043
Identities = 13/22 (59%), Positives = 17/22 (77%)
Frame = -1 / -3
Query: 876 MREFRDLFEGIQSMTYCCGNFG 811
MRE DLF+G++S+T CCG G
Sbjct: 665 MRECHDLFKGLESLTDCCGGDG 600
Score = 31.3 bits (62), Expect(5) = 1e-043
Identities = 12/17 (70%), Positives = 13/17 (76%)
Frame = -1 / -3
Query: 813 GDDKGARAIVKAFPHIK 763
GD K ARAI KA PH+K
Sbjct: 608 GDGKTARAITKAHPHVK 558
Score = 26.7 bits (52), Expect(5) = 1e-043
Identities = 10/17 (58%), Positives = 12/17 (70%)
Frame = -1 / -1
Query: 765 KCTVLAPPKIIATKPAD 715
KCTVL PK+I P+D
Sbjct: 559 KCTVLDLPKVIEKTPSD 509
>gb|CB876850.1|CB876850 HP02J21T HP Hordeum vulgare subsp. vulgare cDNA clone HP02J21
5-PRIME, mRNA sequence
Length = 564
Score = 107 bits (229), Expect(3) = 2e-043
Identities = 44/84 (52%), Positives = 62/84 (73%)
Frame = -1 / +1
Query: 1419 PSDAELLKAQADIWRLSLSYLTPLSLRCAVELGIPTAIYRHGGAASAAELVTALSLPSAK 1240
P+DA+L++AQAD+WR SL +LT ++LRCAV+LGIPTAI+R GG S ++LVTALSLP +K
Sbjct: 58 PTDAQLIQAQADLWRHSLCHLTAMALRCAVQLGIPTAIHRLGGTTSVSDLVTALSLPQSK 237
Query: 1239 LPFXXXXXXXLAASGVFTVDRQST 1168
+P+ L+ SG ++ T
Sbjct: 238 MPYLGRVLRLLSTSGALASPKEGT 309
Score = 78.0 bits (164), Expect(3) = 3e-023
Identities = 42/81 (51%), Positives = 45/81 (55%)
Frame = +2 / -2
Query: 1178 LSTVNTPDAAXXXXXXXXNGSLAEGRDSAVTSSAAEAAPPWR*IAVGMPSSTAHLSDRGV 1357
L PD G L GRD+AVT S + PP R*IAVGMPS TAHLS V
Sbjct: 299 LGDAKAPDVDNNRKTRPRYGILDCGRDNAVTRSDTDVVPPSR*IAVGMPSWTAHLSAMAV 120
Query: 1358 R*ERLSRHMSACAFSSSASLG 1420
R RL RH SACA S AS+G
Sbjct: 119 RWHRLWRHRSACA*ISWASVG 57
Score = 65.7 bits (137), Expect(3) = 2e-043
Identities = 27/59 (45%), Positives = 39/59 (66%)
Frame = -1 / +1
Query: 1173 STEEERYRISPVSYLLVDGIPHEDHMNHTALVLTCTSTRYIEAGIGLAEWFKRDVVTSP 997
S +E Y + P+SYLLVDG+ + + AL+L+ TS IEA +GLA+WFK+D+ P
Sbjct: 292 SPKEGTYSLVPLSYLLVDGVFIDGEASQKALLLSTTSRYNIEAALGLADWFKKDITPPP 468
Score = 41.8 bits (85), Expect(3) = 2e-043
Identities = 17/31 (54%), Positives = 22/31 (70%)
Frame = -1 / +1
Query: 1002 SPFEELHGATLFHESMGSLDADFHDMASEAL 910
SP E++HGATLF ESM LD + ++ EAL
Sbjct: 469 SPXEDVHGATLFEESMALLDPESDELFHEAL 561
Score = 41.4 bits (84), Expect(3) = 3e-023
Identities = 25/53 (47%), Positives = 28/53 (52%)
Frame = +2 / -2
Query: 986 SSSNGDVTTSLLNHSASPIPASM*RVEVQVSTRAVWFMWSS*GMPSTRR*DTG 1144
S +G S LN SASP ASM +EV S RA S PSTRR D+G
Sbjct: 479 SXGDGGGVMSFLNQSASPKAASMLYLEVVESKRAF*LASPSMNTPSTRRYDSG 321
Score = 27.6 bits (54), Expect(3) = 3e-023
Identities = 16/32 (50%), Positives = 19/32 (59%)
Frame = +2 / -2
Query: 908 SKASLAMSWKSASRLPMLSWNRVAPCSSSNGD 1003
+KAS S S SR +LS VAP +SS GD
Sbjct: 563 AKASWNNSSDSGSRRAILSSKSVAP*TSSXGD 468
>gb|BF628014.2|BF628014 HVSMEb0002J23f Hordeum vulgare seedling shoot EST library HVcDNA0002
(Dehydration stress) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEb0002J23f, mRNA sequence
Length = 665
Score = 102 bits (218), Expect(4) = 2e-043
Identities = 46/85 (54%), Positives = 58/85 (68%)
Frame = -1 / +3
Query: 1443 AMASEVVRPSDAELLKAQADIWRLSLSYLTPLSLRCAVELGIPTAIYRHGGAASAAELVT 1264
A A E+ P AELL+AQAD+WR +L YLT + LRCAV+LGIPTAI+ G +S A+L
Sbjct: 54 AQAPEMEVPKGAELLQAQADLWRHTLYYLTSMGLRCAVKLGIPTAIHNLSGVSSLADLAA 233
Query: 1263 ALSLPSAKLPFXXXXXXXLAASGVF 1189
ALS+P++K PF L SGVF
Sbjct: 234 ALSIPASKQPFLGRLMRALVTSGVF 308
Score = 76.2 bits (160), Expect(3) = 4e-025
Identities = 41/83 (49%), Positives = 50/83 (60%)
Frame = +1 / -1
Query: 1186 GEHARRGEEPQQAAEERQLSGGERQRRDQLSG*GSPAMAVDRRRDAKLHGAPQ*QGREVG 1365
GE A + QAA+ER L+ G+ QR Q+S G PA VDRRRDA+L GA + GREV
Sbjct: 311 GEDA*GDQRAHQAAKERLLACGDGQRGRQVSQRGDPAEVVDRRRDAELDGAAEPHGREVV 132
Query: 1366 EAEPPYVGLCL**LGVARADNLR 1434
+ P VGLCL LG +LR
Sbjct: 131 KGVAPQVGLCLQELGTLGDLHLR 63
Score = 62.9 bits (131), Expect(4) = 2e-043
Identities = 22/50 (44%), Positives = 37/50 (74%)
Frame = -1 / +3
Query: 1161 ERYRISPVSYLLVDGIPHEDHMNHTALVLTCTSTRYIEAGIGLAEWFKRD 1012
E + ++P+S +LVDG+ ++H + T+ VL TS Y+EA +G+A+WFK+D
Sbjct: 339 ELFGLNPLSRILVDGVVADEHHSQTSFVLAGTSRHYMEAALGMADWFKKD 488
Score = 43.7 bits (89), Expect(3) = 4e-025
Identities = 23/44 (52%), Positives = 26/44 (59%)
Frame = +2 / -2
Query: 1013 SLLNHSASPIPASM*RVEVQVSTRAVWFMWSS*GMPSTRR*DTG 1144
S LN SA P ASM* +V ST+ VW SS PSTR D+G
Sbjct: 487 SFLNQSAMPSAASM*CRDVPASTKDVWLWCSSATTPSTRMRDSG 356
Score = 38.2 bits (77), Expect(4) = 2e-043
Identities = 15/34 (44%), Positives = 21/34 (61%)
Frame = -1 / +1
Query: 948 LDADFHDMASEALDAHDNFGIEIAMREFRDLFEG 847
LD + + ++ L AHDN GI +RE DLF+G
Sbjct: 562 LDPELDALGTDGLAAHDNLGIGTIIRECHDLFKG 663
Score = 33.6 bits (67), Expect(3) = 4e-025
Identities = 12/34 (35%), Positives = 23/34 (67%)
Frame = +2 / -1
Query: 848 PSNKSLNSRIAISMPKLSWASKASLAMSWKSASR 949
P +S +SR+ + +P+LSWA++ S+ + S S+
Sbjct: 662 PLKRSWHSRMMVPIPRLSWAARPSVPSASSSGSK 561
Score = 29.0 bits (57), Expect(4) = 2e-043
Identities = 11/21 (52%), Positives = 16/21 (76%)
Frame = -1 / +3
Query: 1008 VTSPFEELHGATLFHESMGSL 946
V S FE++H A+LF+ES +L
Sbjct: 501 VPSVFEDVHNASLFYESTAAL 563
>gb|BJ468335.1|BJ468335 BJ468335 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags38e18 3', mRNA sequence
Length = 744
Score = 79.0 bits (166), Expect(4) = 8e-043
Identities = 32/53 (60%), Positives = 37/53 (69%)
Frame = -1 / -3
Query: 513 MLETHLLMDIGMMTMTKGRQRDEKEWSELFTKAGFSEYKILKEFGARVAFEVY 355
M E LMDI M+ T+GRQR E +W LFTKAGFS+YKI+K GAR EVY
Sbjct: 370 MFEAQTLMDILMLVFTRGRQRSESDWHVLFTKAGFSDYKIVKRLGARGVIEVY 212
Score = 79.0 bits (166), Expect(4) = 8e-043
Identities = 30/72 (41%), Positives = 47/72 (65%)
Frame = -1 / -3
Query: 735 IATKPADGAMINYVEGDMFSFIPPAQTXXXXXXXXXLTDEECVKLLAQCRKAIPSRKDGG 556
+ K + ++NYV GD+F +P AQ +D++CVK+L QC+ AIPSR++GG
Sbjct: 598 VIDKTSADGIVNYVGGDLFHTVPKAQAVMLKLVLHHWSDDDCVKILTQCKNAIPSREEGG 419
Query: 555 KVIIGDIMIDHS 520
KVI+ DI+++ S
Sbjct: 418 KVIVIDIVVEPS 383
Score = 56.1 bits (116), Expect(3) = 7e-021
Identities = 26/47 (55%), Positives = 30/47 (63%)
Frame = +2 / +3
Query: 569 REGIAFRH*ARSLTHSSSVRWCSTSFSTTV*AGGMKLNMSPST*FII 709
REG+AF H R T SSS++WC+TS S T *A G N SP T* I
Sbjct: 432 REGMAFLHWVRIFTQSSSLQWCNTSLSITA*AFGTVWNRSPPT*LTI 572
Score = 47.3 bits (97), Expect(3) = 7e-021
Identities = 26/49 (53%), Positives = 29/49 (59%)
Frame = +2 / +3
Query: 350 HG*TSKATRAPNSFRILYSLNPALVKSSLHSFSSLCRPFVMVIMPMSIR 496
H *TS RAP+ IL SLNPALV ++ S S RP V M MSIR
Sbjct: 207 HL*TSITPRAPSLLTIL*SLNPALVNNTCQSLSLR*RPLVKTSMSMSIR 353
Score = 37.7 bits (76), Expect(4) = 8e-043
Identities = 15/24 (62%), Positives = 17/24 (70%)
Frame = -1 / -3
Query: 783 KAFPHIKCTVLAPPKIIATKPADG 712
+A PHIKCTVL PK+I ADG
Sbjct: 643 RAHPHIKCTVLDLPKVIDKTSADG 572
Score = 35.4 bits (71), Expect(3) = 7e-021
Identities = 14/24 (58%), Positives = 19/24 (79%)
Frame = +2 / +3
Query: 713 PSAGLVAMILGGASTVHFMCGKAL 784
PSA ++++ LG +STVH MCG AL
Sbjct: 573 PSAEVLSITLGRSSTVHLMCGWAL 644
Score = 35.4 bits (71), Expect(4) = 8e-043
Identities = 12/22 (54%), Positives = 17/22 (77%)
Frame = -1 / -2
Query: 876 MREFRDLFEGIQSMTYCCGNFG 811
+RE DLF+G++S+T CCG G
Sbjct: 731 IRECHDLFKGLESLTDCCGGDG 666
>gb|BF261193.2|BF261193 HVSMEf0011F03f Hordeum vulgare seedling root EST library HVcDNA0007
(Etiolated and unstressed) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEf0011F03f, mRNA sequence
Length = 825
Score = 108 bits (230), Expect(5) = 1e-042
Identities = 49/91 (53%), Positives = 61/91 (67%)
Frame = -1 / +2
Query: 1443 AMASEVVRPSDAELLKAQADIWRLSLSYLTPLSLRCAVELGIPTAIYRHGGAASAAELVT 1264
A A + +DAELL+AQAD+WR SL YL+ + LRCAV+L IPT I+R GG A A+L+
Sbjct: 35 AQADTIEVRADAELLQAQADLWRHSLYYLSSMGLRCAVQLQIPTTIHRLGGVALLADLMA 214
Query: 1263 ALSLPSAKLPFXXXXXXXLAASGVFTVDRQS 1171
ALSLPS K+PF L SGVF D+ S
Sbjct: 215 ALSLPSVKMPFLHRLMRVLVTSGVFAADKDS 307
Score = 71.6 bits (150), Expect(4) = 4e-022
Identities = 38/79 (48%), Positives = 44/79 (55%)
Frame = +2 / -1
Query: 1178 LSTVNTPDAAXXXXXXXXNGSLAEGRDSAVTSSAAEAAPPWR*IAVGMPSSTAHLSDRGV 1357
LS TPD NG +GRD+A SA++A PP R + VG+ S TA S
Sbjct: 300 LSAAKTPDVTSTRMSRWRNGIFTDGRDNAAIRSASKATPPRRWMVVGI*SWTAQRSPMED 121
Query: 1358 R*ERLSRHMSACAFSSSAS 1414
R* RL RH SACA SSSAS
Sbjct: 120 R**RLWRHRSACACSSSAS 64
Score = 43.2 bits (88), Expect(5) = 1e-042
Identities = 18/41 (43%), Positives = 25/41 (60%)
Frame = -1 / +3
Query: 969 FHESMGSLDADFHDMASEALDAHDNFGIEIAMREFRDLFEG 847
F E +D +F +A+E L AHDN GI + E RD+F+G
Sbjct: 519 FDERTPLMDEEFAAVANERLAAHDNLGIATILPECRDIFQG 641
Score = 37.3 bits (75), Expect(5) = 1e-042
Identities = 13/33 (39%), Positives = 21/33 (63%)
Frame = -1 / +2
Query: 1107 EDHMNHTALVLTCTSTRYIEAGIGLAEWFKRDV 1009
++H + VL T+ EA +GLA+WFK+D+
Sbjct: 371 DEHHSQKYFVLAVTAPHCAEAALGLADWFKKDL 469
Score = 32.7 bits (65), Expect(4) = 4e-022
Identities = 13/22 (59%), Positives = 15/22 (68%)
Frame = +1 / -3
Query: 1018 LEPLRQPYPRLDVARRGAGEHQ 1083
LEP+RQP L RRG GEH+
Sbjct: 460 LEPVRQPQRSLCAMRRGHGEHE 395
Score = 32.7 bits (65), Expect(4) = 4e-022
Identities = 16/39 (41%), Positives = 24/39 (61%)
Frame = +2 / -3
Query: 848 PSNKSLNSRIAISMPKLSWASKASLAMSWKSASRLPMLS 964
P S +S +++PKLSWA+ SLA + S+S +LS
Sbjct: 640 P*KMSRHSGNMVAIPKLSWAANLSLATAANSSSMRGVLS 524
Score = 31.8 bits (63), Expect(5) = 1e-042
Identities = 11/21 (52%), Positives = 16/21 (76%)
Frame = -1 / +2
Query: 1161 ERYRISPVSYLLVDGIPHEDH 1099
E YR++P+S +LVDG+ E H
Sbjct: 320 ELYRLTPLSRILVDGVTDEHH 382
Score = 27.2 bits (53), Expect(5) = 1e-042
Identities = 9/14 (64%), Positives = 12/14 (85%)
Frame = -1 / +2
Query: 1008 VTSPFEELHGATLF 967
V SPFE++HGA +F
Sbjct: 479 VPSPFEDMHGAPVF 520
Score = 23.1 bits (44), Expect(4) = 4e-022
Identities = 9/21 (42%), Positives = 14/21 (66%)
Frame = +2 / -1
Query: 1091 WFMWSS*GMPSTRR*DTGLMR 1153
+++W S PSTR D+G+ R
Sbjct: 390 FWLWCSSVTPSTRMRDSGVRR 328
Database: Hordeum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:16 PM
Number of letters in database: 175,134,539
Number of sequences in database: 312,970
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 767,304,621
Number of Sequences: 312970
Number of extensions: 14348112
Number of successful extensions: 121714
Number of sequences better than 1.0e-020: 255
length of database: 58,378,179
effective HSP length: 53
effective length of database: 41,790,769
effective search space used: 18931218357
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)