TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 131555.2.1
(1236 letters)
Database: Hordeum_nucl_with_EST.fasta
312,970 sequences; 175,134,539 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BE559021.2|BE559021 HV_CEb0022F12f Hordeum vulgare seedl... 384 e-106
gb|BJ463463.1|BJ463463 BJ463463 K. Sato unpublished cDNA li... 379 e-104
gb|AL506722.1|AL506722 AL506722 Hordeum vulgare Barke devel... 374 e-103
gb|BJ464137.1|BJ464137 BJ464137 K. Sato unpublished cDNA li... 374 e-103
gb|BJ464456.1|BJ464456 BJ464456 K. Sato unpublished cDNA li... 298 e-100
gb|AV918145.1|AV918145 AV918145 K. Sato unpublished cDNA li... 188 4e-094
gb|CA013907.1|CA013907 HT09N23r HT Hordeum vulgare subsp. v... 229 1e-089
gb|AV915311.1|AV915311 AV915311 K. Sato unpublished cDNA li... 330 1e-089
gb|AV914084.1|AV914084 AV914084 K. Sato unpublished cDNA li... 192 1e-088
gb|AV913390.1|AV913390 AV913390 K. Sato unpublished cDNA li... 315 3e-085
gb|CA032017.1|CA032017 HX11M09r HX Hordeum vulgare subsp. v... 313 1e-084
gb|AV913397.1|AV913397 AV913397 K. Sato unpublished cDNA li... 312 3e-084
gb|CA007645.1|CA007645 HU08J12r HU Hordeum vulgare subsp. v... 312 3e-084
gb|BJ466618.1|BJ466618 BJ466618 K. Sato unpublished cDNA li... 188 2e-083
gb|BJ466412.1|BJ466412 BJ466412 K. Sato unpublished cDNA li... 188 2e-083
gb|BE602876.2|BE602876 HVSMEh0100H17f Hordeum vulgare 5-45 ... 306 1e-082
gb|AV920406.1|AV920406 AV920406 K. Sato unpublished cDNA li... 188 2e-082
gb|AV919693.1|AV919693 AV919693 K. Sato unpublished cDNA li... 188 2e-082
gb|AV918687.1|AV918687 AV918687 K. Sato unpublished cDNA li... 188 2e-082
gb|AV914608.1|AV914608 AV914608 K. Sato unpublished cDNA li... 301 5e-081
gb|CA031581.1|CA031581 HX10G17r HX Hordeum vulgare subsp. v... 299 2e-080
gb|AV919125.1|AV919125 AV919125 K. Sato unpublished cDNA li... 188 4e-080
gb|CA007077.1|CA007077 HU06K19r HU Hordeum vulgare subsp. v... 284 8e-076
gb|BE195648.3|BE195648 HVSMEh0090A21f Hordeum vulgare 5-45 ... 184 3e-072
gb|BG369084.2|BG369084 HVSMEi0021K17f Hordeum vulgare 20 DA... 189 3e-071
gb|BE215014.1|BE215014 HV_CEb0005I17f Hordeum vulgare seedl... 212 6e-071
gb|CA013420.1|CA013420 HT08G10r HT Hordeum vulgare subsp. v... 244 3e-068
gb|BM369883.2|BM369883 EBem07_SQ004_O04_R embryo, 28 DPA, n... 255 4e-067
gb|CB879567.1|CB879567 HP02M04w HP Hordeum vulgare subsp. v... 195 3e-066
gb|CB876883.1|CB876883 HP02M04T HP Hordeum vulgare subsp. v... 195 3e-066
gb|CA023572.1|CA023572 HZ46L02r HZ Hordeum vulgare subsp. v... 236 2e-064
gb|BG365391.1|BG365391 HVSMEi0002I06f Hordeum vulgare 20 DA... 241 5e-063
gb|CA019777.1|CA019777 HV13C06r HV Hordeum vulgare subsp. v... 206 1e-060
gb|BJ452084.1|BJ452084 BJ452084 K. Sato unpublished cDNA li... 222 2e-059
gb|BU985911.1|BU985911 HF08P24r HF Hordeum vulgare subsp. v... 220 2e-056
gb|CA011608.1|CA011608 HT03A12r HT Hordeum vulgare subsp. v... 218 6e-056
gb|BU988879.1|BU988879 HF18P19r HF Hordeum vulgare subsp. v... 130 2e-053
gb|BQ766677.1|BQ766677 EBro08_SQ006_F23_R root, 3 week, dro... 127 8e-051
gb|BE196376.3|BE196376 HVSMEh0092C03f Hordeum vulgare 5-45 ... 197 8e-051
gb|BU989165.1|BU989165 HF19P19r HF Hordeum vulgare subsp. v... 130 1e-050
gb|BG367870.1|BG367870 HVSMEi0014B22f Hordeum vulgare 20 DA... 109 5e-049
gb|CA010479.1|CA010479 HT09N23u HT Hordeum vulgare subsp. v... 195 5e-049
gb|AW983188.3|AW983188 HVSMEg0008J14f Hordeum vulgare pre-a... 171 4e-048
gb|BJ468735.1|BJ468735 BJ468735 K. Sato unpublished cDNA li... 189 2e-047
gb|BG366287.1|BG366287 HVSMEi0006J10f Hordeum vulgare 20 DA... 70 1e-046
gb|BG301229.1|BG301229 HVSMEb0020B01f Hordeum vulgare seedl... 100 6e-046
gb|BI948507.1|BI948507 HVSMEl0009O08f Hordeum vulgare spike... 182 2e-045
gb|BJ469082.1|BJ469082 BJ469082 K. Sato unpublished cDNA li... 90 3e-045
gb|CB876594.1|CB876594 HX11M09w HX Hordeum vulgare subsp. v... 182 5e-045
gb|BJ457744.1|BJ457744 BJ457744 K. Sato unpublished cDNA li... 98 7e-045
gb|BG415622.2|BG415622 HVSMEk0007D09f Hordeum vulgare testa... 152 2e-044
gb|CB876200.1|CB876200 HX10J08w HX Hordeum vulgare subsp. v... 178 6e-044
gb|CA014495.1|CA014495 HT11I05r HT Hordeum vulgare subsp. v... 98 1e-043
gb|AL505019.1|AL505019 AL505019 Hordeum vulgare Barke roots... 85 2e-042
gb|BF263685.3|BF263685 HV_CEa0007G08f Hordeum vulgare seedl... 97 3e-042
gb|BJ459873.1|BJ459873 BJ459873 K. Sato unpublished cDNA li... 172 3e-042
gb|BG344152.2|BG344152 HVSMEg0007N17f Hordeum vulgare pre-a... 100 7e-042
gb|BI960557.1|BI960557 HVSMEn0025A09f Hordeum vulgare rachi... 100 7e-042
gb|BF066116.1|BF066116 HV_CEb0014O07f Hordeum vulgare seedl... 97 1e-041
gb|BF066138.1|BF066138 HV_CEb0014P07f Hordeum vulgare seedl... 97 1e-041
gb|BQ464700.1|BQ464700 HU01A05T HU Hordeum vulgare subsp. v... 96 1e-041
gb|BI960699.1|BI960699 HVSMEn0025O19f Hordeum vulgare rachi... 96 1e-041
gb|CV063066.1|CV063066 BNEL86c3 Barley EST endosperm librar... 113 4e-041
gb|BJ450325.1|BJ450325 BJ450325 K. Sato unpublished cDNA li... 107 1e-040
gb|BI958105.1|BI958105 HVSMEn0013G15f Hordeum vulgare rachi... 100 3e-040
gb|BU996119.1|BU996119 HM12I01r HM Hordeum vulgare subsp. v... 86 4e-040
gb|BE456124.3|BE456124 HVSMEg0019N22f Hordeum vulgare pre-a... 97 1e-039
gb|AV925423.1|AV925423 AV925423 K. Sato unpublished cDNA li... 85 2e-039
gb|CV054175.1|CV054175 BNEL107f1 Barley EST endosperm libra... 105 3e-039
gb|BG310404.1|BG310404 HVSMEc0018H08f Hordeum vulgare seedl... 89 2e-038
gb|AL503986.1|AL503986 AL503986 Hordeum vulgare Barke roots... 85 2e-038
gb|CA006616.1|CA006616 HU05D06r HU Hordeum vulgare subsp. v... 94 4e-038
gb|BI959031.1|BI959031 HVSMEn0017M21f Hordeum vulgare rachi... 96 6e-038
gb|BJ452324.1|BJ452324 BJ452324 K. Sato unpublished cDNA li... 147 1e-037
gb|BG369168.1|BG369168 HVSMEi0022M03f Hordeum vulgare 20 DA... 85 2e-037
gb|BQ763369.1|BQ763369 EBro02_SQ008_J04_R root, 3 week, hyd... 100 7e-037
gb|BM816674.1|BM816674 HB01C06_T3.ab1 HB Hordeum vulgare su... 88 2e-036
gb|BU986537.1|BU986537 HF12C17r HF Hordeum vulgare subsp. v... 87 2e-036
gb|BQ470739.1|BQ470739 HX03O06r HX Hordeum vulgare subsp. v... 87 2e-036
gb|BU980008.1|BU980008 HA18D04r HA Hordeum vulgare subsp. v... 131 3e-036
gb|CA003151.1|CA003151 HS09J04r HS Hordeum vulgare subsp. v... 131 3e-036
gb|BF255832.2|BF255832 HVSMEf0007P02f Hordeum vulgare seedl... 86 6e-036
gb|AV836450.1|AV836450 AV836450 K. Sato unpublished cDNA li... 128 1e-035
gb|BQ467242.1|BQ467242 HS03C04r HS Hordeum vulgare subsp. v... 98 2e-035
gb|CA021049.1|CA021049 HZ38P08r HZ Hordeum vulgare subsp. v... 118 6e-035
gb|CV057862.1|CV057862 BNEL31f4 Barley EST endosperm librar... 90 2e-034
gb|BQ465481.1|BQ465481 HU03M08r HU Hordeum vulgare subsp. v... 90 2e-034
gb|BQ464838.1|BQ464838 HU01M14T HU Hordeum vulgare subsp. v... 96 3e-033
gb|BU989665.1|BU989665 HF22F21r HF Hordeum vulgare subsp. v... 114 3e-033
gb|BI958862.1|BI958862 HVSMEn0016O20f Hordeum vulgare rachi... 100 4e-033
gb|AV836830.1|AV836830 AV836830 K. Sato unpublished cDNA li... 81 6e-033
gb|BE454948.2|BE454948 HVSMEh0095J23f Hordeum vulgare 5-45 ... 117 6e-033
gb|BQ763022.1|BQ763022 EBro02_SQ006_M20_R root, 3 week, hyd... 70 7e-033
gb|CK122370.1|CK122370 BES1824103a12 BES1824 Hordeum vulgar... 84 2e-032
gb|AW982651.2|AW982651 HVSMEg0003N13f Hordeum vulgare pre-a... 74 2e-032
gb|BM098690.1|BM098690 EBem08_SQ003_M19_R embryo, 40 DPA, n... 113 2e-032
gb|BE214157.3|BE214157 HV_CEb0002H13f Hordeum vulgare seedl... 83 3e-032
gb|BM097482.2|BM097482 EBro05_SQ003_L07_R root, 3 week, red... 111 6e-032
gb|BE194523.2|BE194523 HVSMEh0085O04f Hordeum vulgare 5-45 ... 55 6e-032
gb|BI958316.1|BI958316 HVSMEn0014G04f Hordeum vulgare rachi... 81 8e-032
gb|CK124748.1|CK124748 BES1824110d17 BES1824 Hordeum vulgar... 55 8e-032
gb|BG418564.2|BG418564 HVSMEk0023C20f Hordeum vulgare testa... 55 1e-031
gb|BG416654.1|BG416654 HVSMEk0014A07f Hordeum vulgare testa... 55 1e-031
gb|BG414416.1|BG414416 HVSMEk0002H01f Hordeum vulgare testa... 55 3e-031
gb|CA020044.1|CA020044 HV14C19r HV Hordeum vulgare subsp. v... 113 3e-031
gb|BE455022.2|BE455022 HVSMEh0095O05f Hordeum vulgare 5-45 ... 55 5e-031
gb|BF064595.2|BF064595 HV_CEb0016A19f Hordeum vulgare seedl... 111 5e-031
gb|BG418662.2|BG418662 HVSMEk0023M18f Hordeum vulgare testa... 55 6e-031
gb|CA015399.1|CA015399 HT14D04r HT Hordeum vulgare subsp. v... 96 9e-031
gb|BI956550.1|BI956550 HVSMEn0004B16f Hordeum vulgare rachi... 109 1e-030
gb|AV934049.1|AV934049 AV934049 K. Sato unpublished cDNA li... 59 1e-030
gb|AV931570.1|AV931570 AV931570 K. Sato unpublished cDNA li... 74 2e-030
gb|CV063107.1|CV063107 BNEL86g1 Barley EST endosperm librar... 77 2e-030
gb|AV934152.1|AV934152 AV934152 K. Sato unpublished cDNA li... 59 3e-030
gb|BG418101.2|BG418101 HVSMEk0021F02f Hordeum vulgare testa... 55 4e-030
gb|BJ459644.1|BJ459644 BJ459644 K. Sato unpublished cDNA li... 119 5e-030
gb|BQ458877.1|BQ458877 HA02P13r HA Hordeum vulgare subsp. v... 55 7e-030
gb|BI957284.1|BI957284 HVSMEn0008K05f Hordeum vulgare rachi... 100 7e-030
gb|BE196379.3|BE196379 HVSMEh0092C06f Hordeum vulgare 5-45 ... 61 1e-029
gb|BI777845.2|BI777845 EBro08_SQ002_E16_R root, 3 week, dro... 68 1e-029
gb|CA027702.1|CA027702 HZ59M02r HZ Hordeum vulgare subsp. v... 89 2e-029
gb|BF253936.2|BF253936 HVSMEf0002I16f Hordeum vulgare seedl... 61 4e-029
gb|BU987846.1|BU987846 HF15O20r HF Hordeum vulgare subsp. v... 114 4e-029
gb|BM442085.2|BM442085 EBan01_SQ002_C10_R anther, yellow st... 128 6e-029
gb|AL450961.1|AL450961 AL450961 Hordeum vulgare Barke etiol... 54 8e-029
gb|BG415963.1|BG415963 HVSMEk0009D15f Hordeum vulgare testa... 55 1e-028
gb|AV918067.1|AV918067 AV918067 K. Sato unpublished cDNA li... 126 2e-028
gb|BI956546.1|BI956546 HVSMEn0004B08f Hordeum vulgare rachi... 76 3e-028
gb|AV936403.1|AV936403 AV936403 K. Sato unpublished cDNA li... 70 4e-028
gb|AV936300.1|AV936300 AV936300 K. Sato unpublished cDNA li... 70 4e-028
gb|BF263684.3|BF263684 HV_CEa0007G07f Hordeum vulgare seedl... 97 8e-028
gb|BE601965.2|BE601965 HVSMEh0100J12f Hordeum vulgare 5-45 ... 47 9e-028
gb|BI957975.1|BI957975 HVSMEn0012L23f Hordeum vulgare rachi... 96 1e-027
gb|BE519901.1|BE519901 HV_CEb0021K08f Hordeum vulgare seedl... 52 2e-027
gb|BQ767762.1|BQ767762 EBro08_SQ009_D21 _R root, 3 week, dr... 85 2e-027
gb|AV936413.1|AV936413 AV936413 K. Sato unpublished cDNA li... 70 3e-027
gb|BI960410.1|BI960410 HVSMEn0024I04f Hordeum vulgare rachi... 81 3e-027
gb|BG343487.1|BG343487 HVSMEg0005O08f Hordeum vulgare pre-a... 72 6e-027
gb|AV913567.1|AV913567 AV913567 K. Sato unpublished cDNA li... 61 9e-027
gb|AV926665.1|AV926665 AV926665 K. Sato unpublished cDNA li... 61 9e-027
gb|BQ460124.1|BQ460124 HA07C19r HA Hordeum vulgare subsp. v... 61 9e-027
gb|BU986380.1|BU986380 HF11K09r HF Hordeum vulgare subsp. v... 61 9e-027
gb|CA020126.1|CA020126 HV14G15r HV Hordeum vulgare subsp. v... 61 9e-027
gb|BQ467571.1|BQ467571 HS04D07r HS Hordeum vulgare subsp. v... 61 9e-027
gb|BF628107.2|BF628107 HVSMEb0003C11f Hordeum vulgare seedl... 61 9e-027
gb|BJ544054.1|BJ544054 BJ544054 K. Sato unpublished cDNA li... 59 1e-026
gb|CA001675.1|CA001675 HS05E05r HS Hordeum vulgare subsp. v... 98 2e-026
gb|CA021911.1|CA021911 HZ41I09r HZ Hordeum vulgare subsp. v... 61 2e-026
gb|BI959591.1|BI959591 HVSMEn0020F03f Hordeum vulgare rachi... 100 2e-026
gb|AL505150.1|AL505150 AL505150 Hordeum vulgare Barke roots... 61 2e-026
gb|AV935958.1|AV935958 AV935958 K. Sato unpublished cDNA li... 119 3e-026
gb|BU973416.1|BU973416 HB24O01r BC Hordeum vulgare subsp. v... 61 3e-026
gb|BG415394.2|BG415394 HVSMEk0006F01f Hordeum vulgare testa... 55 4e-026
gb|BE060930.3|BE060930 HVSMEg0013N24f Hordeum vulgare pre-a... 97 4e-026
gb|BF259786.2|BF259786 HVSMEf0020E05f Hordeum vulgare seedl... 61 6e-026
gb|BQ459797.1|BQ459797 HA08A23r HA Hordeum vulgare subsp. v... 61 6e-026
gb|CA007861.1|CA007861 HU09D12r HU Hordeum vulgare subsp. v... 96 8e-026
gb|CA004585.1|CA004585 HS18B01r HS Hordeum vulgare subsp. v... 96 8e-026
gb|BI958488.1|BI958488 HVSMEn0015E11f Hordeum vulgare rachi... 72 1e-025
gb|CA002692.1|CA002692 HS08E02r HS Hordeum vulgare subsp. v... 61 2e-025
gb|CA015542.1|CA015542 HT14K06r HT Hordeum vulgare subsp. v... 52 3e-025
gb|BG415494.2|BG415494 HVSMEk0006L12f Hordeum vulgare testa... 41 5e-025
gb|BI776330.2|BI776330 EBem04_SQ001_K08_R embryo, 12 DPA, n... 77 7e-025
gb|BF265665.2|BF265665 HV_CEa0013A06f Hordeum vulgare seedl... 59 7e-025
gb|BM816368.1|BM816368 HB02H12_T3.ab1 HB Hordeum vulgare su... 52 7e-025
gb|BQ763205.1|BQ763205 EBro02_SQ007_F14_R root, 3 week, hyd... 105 9e-025
gb|BE454559.2|BE454559 HVSMEh0094E03f Hordeum vulgare 5-45 ... 59 1e-024
gb|BG415421.2|BG415421 HVSMEk0006G24f Hordeum vulgare testa... 55 2e-024
gb|BG414733.1|BG414733 HVSMEk0003H17f Hordeum vulgare testa... 55 2e-024
gb|BQ763026.1|BQ763026 EBro02_SQ006_N19_R root, 3 week, hyd... 69 2e-024
gb|BU974025.1|BU974025 HB26K23r BC Hordeum vulgare subsp. v... 54 5e-024
gb|BI950770.1|BI950770 HVSMEl0023C06f Hordeum vulgare spike... 82 6e-024
gb|BU986605.1|BU986605 HF12G04r HF Hordeum vulgare subsp. v... 111 8e-024
gb|BF267436.2|BF267436 HV_CEa0017O20f Hordeum vulgare seedl... 72 8e-024
gb|CK125597.1|CK125597 BES1824109c14 BES1824 Hordeum vulgar... 55 2e-023
gb|BG414757.2|BG414757 HVSMEk0003J21f Hordeum vulgare testa... 55 2e-023
gb|BI955632.1|BI955632 HVSMEm0023N15f Hordeum vulgare green... 57 2e-023
gb|BJ474296.1|BJ474296 BJ474296 K. Sato unpublished cDNA li... 81 2e-023
gb|BE602882.1|BE602882 HVSMEh0100J05f Hordeum vulgare 5-45 ... 55 3e-023
gb|BM373176.2|BM373176 EBma04_SQ003_G09_R maternal, 10 DPA,... 55 4e-023
gb|BQ760073.1|BQ760073 EBpi07_SQ003_J03_R pistil, 12 DPA, n... 55 4e-023
gb|BM098777.2|BM098777 EBpi05_SQ002_A12_R pistil, 8 DPA, no... 55 4e-023
gb|AL508144.1|AL508144 AL508144 Hordeum vulgare Barke devel... 55 5e-023
gb|BE454821.3|BE454821 HVSMEh0095D03f Hordeum vulgare 5-45 ... 55 5e-023
gb|BG415143.1|BG415143 HVSMEk0005F01f Hordeum vulgare testa... 55 7e-023
gb|BG415589.2|BG415589 HVSMEk0007B19f Hordeum vulgare testa... 55 7e-023
gb|AV911222.1|AV911222 AV911222 K. Sato unpublished cDNA li... 70 1e-022
gb|BQ467661.1|BQ467661 HS04H17r HS Hordeum vulgare subsp. v... 74 1e-022
gb|BM373054.2|BM373054 EBma04_SQ002_O16_R maternal, 10 DPA,... 55 2e-022
gb|BI958620.1|BI958620 HVSMEn0015P02f Hordeum vulgare rachi... 83 2e-022
gb|BE455566.2|BE455566 HVSMEg0017N13f Hordeum vulgare pre-a... 70 4e-022
gb|BJ476181.1|BJ476181 BJ476181 K. Sato unpublished cDNA li... 104 1e-021
gb|BM374136.2|BM374136 EBma03_SQ003_M01_R maternal, 8 DPA, ... 55 1e-021
gb|BG414602.1|BG414602 HVSMEk0003A18f Hordeum vulgare testa... 56 1e-021
gb|BF264429.3|BF264429 HV_CEa0009G11f Hordeum vulgare seedl... 92 2e-021
gb|AL507235.1|AL507235 AL507235 Hordeum vulgare Barke devel... 55 2e-021
gb|BU968989.1|BU968989 HB10D02r BC Hordeum vulgare subsp. v... 62 2e-021
gb|BG415627.1|BG415627 HVSMEk0007E01f Hordeum vulgare testa... 62 3e-021
gb|BU989611.1|BU989611 HF22D10r HF Hordeum vulgare subsp. v... 62 3e-021
gb|BU980158.1|BU980158 HA18N13r HA Hordeum vulgare subsp. v... 61 3e-021
gb|BG418144.1|BG418144 HVSMEk0021J04f Hordeum vulgare testa... 60 4e-021
gb|BG414609.1|BG414609 HVSMEk0003B03f Hordeum vulgare testa... 46 5e-021
gb|CA022119.1|CA022119 HZ42D14r HZ Hordeum vulgare subsp. v... 67 6e-021
gb|BF065218.2|BF065218 HV_CEb0024E13f Hordeum vulgare seedl... 47 7e-021
gb|BG418326.2|BG418326 HVSMEk0022F08f Hordeum vulgare testa... 62 7e-021
gb|BM442873.2|BM442873 EBro02_SQ001_K13_R root, 3 week, hyd... 69 8e-021
>gb|BE559021.2|BE559021 HV_CEb0022F12f Hordeum vulgare seedling green leaf EST library
HVcDNA0005 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEb0022F12f, mRNA sequence
Length = 697
Score = 384 bits (833), Expect = e-106
Identities = 163/209 (77%), Positives = 179/209 (85%)
Frame = +2 / +1
Query: 65 RKSVCVTGAGGFVASELVKLLLSRGQYAVRGTVRDPGASKNAHLKVLEGAEERLQLLKAD 244
R VCVTGAGGFVAS LVKLLLS+ Y VRGTVRDPG +KNAHLK LEGA ERLQLL AD
Sbjct: 70 RSVVCVTGAGGFVASWLVKLLLSKAHYTVRGTVRDPGNAKNAHLKALEGAGERLQLLSAD 249
Query: 245 LMDYDSIASAVAGCEGVFHVASPVLSHRPSNPEVEVIAPAVTGTTNVLKACYEAKVRRVV 424
L+DYDSIASAVAGCEGVFHVASPV S R +NPE EVIAPAVTGT NVLKAC EAKV+RVV
Sbjct: 250 LLDYDSIASAVAGCEGVFHVASPVPSGRSTNPEEEVIAPAVTGTLNVLKACNEAKVKRVV 429
Query: 425 VVSSCGAVYANPIYPKGKVFDEDCWSDEDYCRKKEDWYLVSKTLSEREALAFAAKTGLDV 604
+VSSC AV+ NP +PKGKVF ED WSDED CRK EDWYL+SKT +EREA A+AAKTG+DV
Sbjct: 430 IVSSCAAVFNNPNWPKGKVFTEDSWSDEDLCRKGEDWYLLSKTRAEREAFAYAAKTGMDV 609
Query: 605 VTVCPSLVFGPLMQPTVNLSSEMILKYFK 691
V + PSLV GPLMQPTVN SS+++LKY K
Sbjct: 610 VAILPSLVLGPLMQPTVNASSKILLKYLK 696
Score = 309 bits (669), Expect = 2e-083
Identities = 143/206 (69%), Positives = 153/206 (74%)
Frame = -1 / -3
Query: 690 LKYLRIISLLKFTVGCIKGPNTNDGQTVTTSSPVFAAKARASRSDSVLETKYXXXXXXXX 511
L+YLR I LL FTVGCIKGP+TNDG+ TTS PVFAA A+ASRS VLE+KY
Sbjct: 695 LRYLRRILLLAFTVGCIKGPSTNDGRIATTSIPVFAA*AKASRSARVLESKYQSSPFLHR 516
Query: 510 XXXXXXXXSNTLPFG*IGLAYTAPHEDTTTTRLTFAS*QAFNTLVVPVTAGAMTSTSGLE 331
NTLP G +GL TA HEDT TTRLTFAS QAFNT VPVTAGA+TS+SGL
Sbjct: 515 SSSDQLSSVNTLPLGQLGLLNTAAHEDTMTTRLTFASLQAFNTFSVPVTAGAITSSSGLV 336
Query: 330 GRWERTGLATWKTPSQPATADAMLS*SIRSALRSCNLSSAPSSTLRWAFLLAPGSRTVPR 151
E TGLATWKTPSQPATADAMLS*S RSAL SC+LS APSS LR AFL PGSRTVPR
Sbjct: 335 DLPEGTGLATWKTPSQPATADAMLS*SSRSALSSCSLSPAPSSALR*AFLALPGSRTVPR 156
Query: 150 TAYWPRERRSFTSSDATKPPAPVTHT 73
T W ERRS TS +ATKPPAPVTHT
Sbjct: 155 TV*WALERRSLTSHEATKPPAPVTHT 78
Score = 196 bits (423), Expect = 2e-049
Identities = 106/183 (57%), Positives = 119/183 (65%)
Frame = +3 / +2
Query: 144 TRSAAPCATLVLARMPISRCWKELRKGCSFSRLI*WTTTALHQQLPAVRVSSM*LALSFP 323
T SAAPCA V+ RM ISR K L KGCS S L WTTTAL ++L AVR SSM LALS
Sbjct: 149 TLSAAPCAIPVMLRMLISRR*KVLGKGCSCSALTCWTTTALRRRLLAVRASSMLLALSLL 328
Query: 324 IDPPTLRWRS*LPL*QVQPMC*RLAMRQKLGELWWCLHVELCMLILFIRRVRCLMKTAGQ 503
+D PTLR + * L*Q MC*RLA RQKL EL CLHV LC IL R + L+KTAGQ
Sbjct: 329 VDRPTLRKKL*PLL*QAH*MC*RLATRQKLSELS*CLHVLLCSTILTGPRAKYLLKTAGQ 508
Query: 504 MRITAXXXXXXXXFPKHCRNEKLLLLQQKQGWTL*LFVRH*YLDP*CSLQ*I*AAK*SLN 683
RI A FPK ++ +LLL+Q+K GW L*LF H YL P*CS Q*+ A K S N
Sbjct: 509 TRICAERVRIGICFPKRAQSVRLLLMQRKLGWML*LFYHHWYLAP*CSQQ*MRAVKFSSN 688
Query: 684 ISK 692
I K
Sbjct: 689 ILK 697
Score = 185 bits (399), Expect = 4e-046
Identities = 96/170 (56%), Positives = 109/170 (64%)
Frame = -2 / -1
Query: 692 L*NI*GSFRCSNLL*AASRVQILMTDKQLQRPALFLLQKQELLVPTVFWKLNTNPPSSCS 513
L*+I*G F CS+ L AASR Q+ M + LQ P+ F L KQ+ FWK NTNP C+
Sbjct: 697 L*DI*GEFYCSHSLLAASRGQVPMMVE*LQHPSQFSLHKQKPHALRAFWKANTNPHPFCT 518
Query: 512 NPHLTSSLHQTPYPSDK*D*HTQLHMKTPPQLA*LLPHSKPLTHWLYLLQREL*PPPQGW 333
+P LTS L P *D TQ HMKT QLA*LLP KP TH + LLQ+ L* PQGW
Sbjct: 517 DPRLTSCLQ*ILCPWAS*DC*TQQHMKTL*QLA*LLPRCKPSTHSVCLLQQGL*LLPQGW 338
Query: 332 RVDGKGQG*LHGRHPHSRQLLMQCCRSPSDQP*EAATFPQLLPAP*DGHS 183
+ KGQG* HGR PHS+Q QCCRSP+ Q * AA FPQ L AP*D HS
Sbjct: 337 SIYQKGQG*QHGRRPHSQQPPTQCCRSPAGQR*AAAAFPQHLLAP*DEHS 188
Score = 153 bits (329), Expect(2) = 3e-048
Identities = 71/117 (60%), Positives = 82/117 (70%)
Frame = -3 / -2
Query: 409 FCLIASL*HIGCTCYSGSYDLHLRVGGSMGKDRASYMEDTLTAGNC*CNAVVVHQISLEK 230
FCL+ASL HI C CYS Y+ LRVG S +DRAS MED LTA N NAVVV Q+S E+
Sbjct: 414 FCLVASLQHIQCACYSRGYNFFLRVGRSTRRDRASNMEDALTASNRRRNAVVVQQVSAEQ 235
Query: 229 LQPFLSSFQHLEMGILASTRVAHGAADRVLAPGEEELHQLRRDEAASAGHAHALPHR 59
LQPF S+F LEM IL+ T +AHGAAD V+ GEEEL + DEA+ AGHAH P R
Sbjct: 234 LQPFPSTF*RLEMSILSITGIAHGAADSVVGLGEEELDEP*GDEASCAGHAHNAPLR 64
Score = 117 bits (251), Expect(3) = 2e-038
Identities = 58/115 (50%), Positives = 73/115 (63%)
Frame = +1 / +3
Query: 334 QP*GGGHSSRCNRYNQCVKGLL*GKS*ASCGGVFMWSCVC*SYLSEG*GV**RLLVR*GL 513
QP*G +S CNR+ +CV+GL GKS*ASC VFM CV S L++G + *R LVR G
Sbjct: 339 QP*GRSYSPCCNRHTECVEGLQRGKS*ASCHSVFMCCCVQQS*LAQGQSIY*RQLVRRGS 518
Query: 514 LQEEGGLVFSFQNTVGTRSSCFCSKNRAGRCNCLSVISIWTLDAAYSKFEQRNDP 678
+Q+ GLVF+FQN C CS+N G C+ ++I W LDAA S+ EQ N P
Sbjct: 519 VQKG*GLVFAFQNARRA*GFCLCSENWDGCCSYSTIIGTWPLDAANSECEQ*NSP 683
Score = 62.5 bits (130), Expect(2) = 3e-048
Identities = 26/49 (53%), Positives = 35/49 (71%)
Frame = -3 / -2
Query: 691 FEIFKDHFAAQIYCRLHQGSKY**RTNSYNVQPCFCCKSKSFSFRQCFG 545
F+IF+++F A+I+C LHQG+KY * NSYN+ P F C SKS + FG
Sbjct: 696 FKIFEENFTARIHCWLHQGAKYQ*W*NSYNIHPSFRCISKSLTLCARFG 550
Score = 44.6 bits (91), Expect(3) = 2e-038
Identities = 19/29 (65%), Positives = 21/29 (72%)
Frame = +1 / +3
Query: 184 ECPSQGAGRS*GKVAASQG*SDGLRQHCI 270
EC SQGA R GK AA+Q * GLRQHC+
Sbjct: 189 ECSSQGARRCWGKAAAAQR*PAGLRQHCV 275
Score = 35.4 bits (71), Expect(3) = 2e-038
Identities = 13/19 (68%), Positives = 15/19 (78%)
Frame = +1 / +3
Query: 112 AGEAPPLPGPIRGPRHRAR 168
A +APPL GP+ PRHRAR
Sbjct: 117 ARQAPPLQGPLHCPRHRAR 173
>gb|BJ463463.1|BJ463463 BJ463463 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags32a03 5', mRNA sequence
Length = 662
Score = 379 bits (821), Expect = e-104
Identities = 161/206 (78%), Positives = 177/206 (85%)
Frame = +2 / +1
Query: 65 RKSVCVTGAGGFVASELVKLLLSRGQYAVRGTVRDPGASKNAHLKVLEGAEERLQLLKAD 244
R VCVTGAGGFVAS LVKLLLS+ Y VRGTVRDPG +KNAHLK LEGA ERLQLL AD
Sbjct: 43 RSVVCVTGAGGFVASWLVKLLLSKAHYTVRGTVRDPGNAKNAHLKALEGAGERLQLLSAD 222
Query: 245 LMDYDSIASAVAGCEGVFHVASPVLSHRPSNPEVEVIAPAVTGTTNVLKACYEAKVRRVV 424
L+DYDSIASAVAGCEGVFHVASPV S R +NPE EVIAPAVTGT NVLKAC EAKV+RVV
Sbjct: 223 LLDYDSIASAVAGCEGVFHVASPVPSGRSTNPEEEVIAPAVTGTLNVLKACNEAKVKRVV 402
Query: 425 VVSSCGAVYANPIYPKGKVFDEDCWSDEDYCRKKEDWYLVSKTLSEREALAFAAKTGLDV 604
+VSSC AV+ NP +PKGKVF ED WSDED CRK EDWYL+SKT +EREA A+AAKTG+DV
Sbjct: 403 IVSSCAAVFNNPNWPKGKVFTEDSWSDEDLCRKGEDWYLLSKTRAEREAFAYAAKTGMDV 582
Query: 605 VTVCPSLVFGPLMQPTVNLSSEMILK 682
V + PSLV GPLMQPTVN SS+++LK
Sbjct: 583 VAILPSLVLGPLMQPTVNASSKILLK 660
Score = 306 bits (663), Expect = 1e-082
Identities = 142/204 (69%), Positives = 151/204 (74%)
Frame = -1 / -1
Query: 684 YLRIISLLKFTVGCIKGPNTNDGQTVTTSSPVFAAKARASRSDSVLETKYXXXXXXXXXX 505
YLR I LL FTVGCIKGP+TNDG+ TTS PVFAA A+ASRS VLE+KY
Sbjct: 662 YLRRILLLAFTVGCIKGPSTNDGRIATTSIPVFAA*AKASRSARVLESKYQSSPFLHRSS 483
Query: 504 XXXXXXSNTLPFG*IGLAYTAPHEDTTTTRLTFAS*QAFNTLVVPVTAGAMTSTSGLEGR 325
NTLP G +GL TA HEDT TTRLTFAS QAFNT VPVTAGA+TS+SGL
Sbjct: 482 SDQLSSVNTLPLGQLGLLNTAAHEDTMTTRLTFASLQAFNTFSVPVTAGAITSSSGLVDL 303
Query: 324 WERTGLATWKTPSQPATADAMLS*SIRSALRSCNLSSAPSSTLRWAFLLAPGSRTVPRTA 145
E TGLATWKTPSQPATADAMLS*S RSAL SC+LS APSS LR AFL PGSRTVPRT
Sbjct: 302 PEGTGLATWKTPSQPATADAMLS*SSRSALSSCSLSPAPSSALR*AFLALPGSRTVPRTV 123
Query: 144 YWPRERRSFTSSDATKPPAPVTHT 73
W ERRS TS +ATKPPAPVTHT
Sbjct: 122 *WALERRSLTSHEATKPPAPVTHT 51
Score = 193 bits (416), Expect = 2e-048
Identities = 104/180 (57%), Positives = 117/180 (65%)
Frame = +3 / +2
Query: 144 TRSAAPCATLVLARMPISRCWKELRKGCSFSRLI*WTTTALHQQLPAVRVSSM*LALSFP 323
T SAAPCA V+ RM ISR K L KGCS S L WTTTAL ++L AVR SSM LALS
Sbjct: 122 TLSAAPCAIPVMLRMLISRR*KVLGKGCSCSALTCWTTTALRRRLLAVRASSMLLALSLL 301
Query: 324 IDPPTLRWRS*LPL*QVQPMC*RLAMRQKLGELWWCLHVELCMLILFIRRVRCLMKTAGQ 503
+D PTLR + * L*Q MC*RLA RQKL EL CLHV LC IL R + L+KTAGQ
Sbjct: 302 VDRPTLRKKL*PLL*QAH*MC*RLATRQKLSELS*CLHVLLCSTILTGPRAKYLLKTAGQ 481
Query: 504 MRITAXXXXXXXXFPKHCRNEKLLLLQQKQGWTL*LFVRH*YLDP*CSLQ*I*AAK*SLN 683
RI A FPK ++ +LLL+Q+K GW L*LF H YL P*CS Q*+ A K S N
Sbjct: 482 TRICAERVRIGICFPKRAQSVRLLLMQRKLGWML*LFYHHWYLAP*CSQQ*MRAVKFSSN 661
Score = 182 bits (393), Expect = 2e-045
Identities = 94/167 (56%), Positives = 106/167 (63%)
Frame = -2 / -2
Query: 683 I*GSFRCSNLL*AASRVQILMTDKQLQRPALFLLQKQELLVPTVFWKLNTNPPSSCSNPH 504
I*G F CS+ L AASR Q+ M + LQ P+ F L KQ+ FWK NTNP C++P
Sbjct: 661 I*GEFYCSHSLLAASRGQVPMMVE*LQHPSQFSLHKQKPHALRAFWKANTNPHPFCTDPR 482
Query: 503 LTSSLHQTPYPSDK*D*HTQLHMKTPPQLA*LLPHSKPLTHWLYLLQREL*PPPQGWRVD 324
LTS L P *D TQ HMKT QLA*LLP KP TH + LLQ+ L* PQGW +
Sbjct: 481 LTSCLQ*ILCPWAS*DC*TQQHMKTL*QLA*LLPRCKPSTHSVCLLQQGL*LLPQGWSIY 302
Query: 323 GKGQG*LHGRHPHSRQLLMQCCRSPSDQP*EAATFPQLLPAP*DGHS 183
KGQG* HGR PHS+Q QCCRSP+ Q * AA FPQ L AP*D HS
Sbjct: 301 QKGQG*QHGRRPHSQQPPTQCCRSPAGQR*AAAAFPQHLLAP*DEHS 161
Score = 153 bits (329), Expect(2) = 8e-047
Identities = 71/117 (60%), Positives = 82/117 (70%)
Frame = -3 / -3
Query: 409 FCLIASL*HIGCTCYSGSYDLHLRVGGSMGKDRASYMEDTLTAGNC*CNAVVVHQISLEK 230
FCL+ASL HI C CYS Y+ LRVG S +DRAS MED LTA N NAVVV Q+S E+
Sbjct: 387 FCLVASLQHIQCACYSRGYNFFLRVGRSTRRDRASNMEDALTASNRRRNAVVVQQVSAEQ 208
Query: 229 LQPFLSSFQHLEMGILASTRVAHGAADRVLAPGEEELHQLRRDEAASAGHAHALPHR 59
LQPF S+F LEM IL+ T +AHGAAD V+ GEEEL + DEA+ AGHAH P R
Sbjct: 207 LQPFPSTF*RLEMSILSITGIAHGAADSVVGLGEEELDEP*GDEASCAGHAHNAPLR 37
Score = 117 bits (251), Expect(3) = 2e-038
Identities = 58/115 (50%), Positives = 73/115 (63%)
Frame = +1 / +3
Query: 334 QP*GGGHSSRCNRYNQCVKGLL*GKS*ASCGGVFMWSCVC*SYLSEG*GV**RLLVR*GL 513
QP*G +S CNR+ +CV+GL GKS*ASC VFM CV S L++G + *R LVR G
Sbjct: 312 QP*GRSYSPCCNRHTECVEGLQRGKS*ASCHSVFMCCCVQQS*LAQGQSIY*RQLVRRGS 491
Query: 514 LQEEGGLVFSFQNTVGTRSSCFCSKNRAGRCNCLSVISIWTLDAAYSKFEQRNDP 678
+Q+ GLVF+FQN C CS+N G C+ ++I W LDAA S+ EQ N P
Sbjct: 492 VQKG*GLVFAFQNARRA*GFCLCSENWDGCCSYSTIIGTWPLDAANSECEQ*NSP 656
Score = 57.4 bits (119), Expect(2) = 8e-047
Identities = 24/46 (52%), Positives = 32/46 (69%)
Frame = -3 / -3
Query: 682 FKDHFAAQIYCRLHQGSKY**RTNSYNVQPCFCCKSKSFSFRQCFG 545
F+++F A+I+C LHQG+KY * NSYN+ P F C SKS + FG
Sbjct: 660 FEENFTARIHCWLHQGAKYQ*W*NSYNIHPSFRCISKSLTLCARFG 523
Score = 44.6 bits (91), Expect(3) = 2e-038
Identities = 19/29 (65%), Positives = 21/29 (72%)
Frame = +1 / +3
Query: 184 ECPSQGAGRS*GKVAASQG*SDGLRQHCI 270
EC SQGA R GK AA+Q * GLRQHC+
Sbjct: 162 ECSSQGARRCWGKAAAAQR*PAGLRQHCV 248
Score = 35.4 bits (71), Expect(3) = 2e-038
Identities = 13/19 (68%), Positives = 15/19 (78%)
Frame = +1 / +3
Query: 112 AGEAPPLPGPIRGPRHRAR 168
A +APPL GP+ PRHRAR
Sbjct: 90 ARQAPPLQGPLHCPRHRAR 146
>gb|AL506722.1|AL506722 AL506722 Hordeum vulgare Barke developing caryopsis (3.-15.DAP)
Hordeum vulgare subsp. vulgare cDNA clone HY04A23T 5',
mRNA sequence
Length = 619
Score = 374 bits (812), Expect = e-103
Identities = 159/204 (77%), Positives = 175/204 (85%)
Frame = +2 / +2
Query: 65 RKSVCVTGAGGFVASELVKLLLSRGQYAVRGTVRDPGASKNAHLKVLEGAEERLQLLKAD 244
R VCVTGAGGFVAS LVKLLLS+ Y VRGTVRDPG +KNAHLK LEGA ERLQLL AD
Sbjct: 8 RSVVCVTGAGGFVASWLVKLLLSKAHYTVRGTVRDPGNAKNAHLKALEGAGERLQLLSAD 187
Query: 245 LMDYDSIASAVAGCEGVFHVASPVLSHRPSNPEVEVIAPAVTGTTNVLKACYEAKVRRVV 424
L+DYDSIASAVAGCEGVFHVASPV S R +NPE EVIAPAVTGT NVLKAC EAKV+RVV
Sbjct: 188 LLDYDSIASAVAGCEGVFHVASPVPSGRSTNPEEEVIAPAVTGTLNVLKACNEAKVKRVV 367
Query: 425 VVSSCGAVYANPIYPKGKVFDEDCWSDEDYCRKKEDWYLVSKTLSEREALAFAAKTGLDV 604
+VSSC AV+ NP +PKGKVF ED WSDED CRK EDWYL+SKT +EREA A+AAKTG+DV
Sbjct: 368 IVSSCAAVFNNPNWPKGKVFTEDSWSDEDLCRKGEDWYLLSKTRAEREAFAYAAKTGMDV 547
Query: 605 VTVCPSLVFGPLMQPTVNLSSEMI 676
V + PSLV GPLMQPTVN SS+++
Sbjct: 548 VAILPSLVLGPLMQPTVNASSKIL 619
Score = 300 bits (650), Expect = 9e-081
Identities = 139/200 (69%), Positives = 148/200 (74%)
Frame = -1 / -2
Query: 672 ISLLKFTVGCIKGPNTNDGQTVTTSSPVFAAKARASRSDSVLETKYXXXXXXXXXXXXXX 493
I LL FTVGCIKGP+TNDG+ TTS PVFAA A+ASRS VLE+KY
Sbjct: 615 ILLLAFTVGCIKGPSTNDGRIATTSIPVFAA*AKASRSARVLESKYQSSPFLHRSSSDQL 436
Query: 492 XXSNTLPFG*IGLAYTAPHEDTTTTRLTFAS*QAFNTLVVPVTAGAMTSTSGLEGRWERT 313
NTLP G +GL TA HEDT TTRLTFAS QAFNT VPVTAGA+TS+SGL E T
Sbjct: 435 SSVNTLPLGQLGLLNTAAHEDTMTTRLTFASLQAFNTFSVPVTAGAITSSSGLVDLPEGT 256
Query: 312 GLATWKTPSQPATADAMLS*SIRSALRSCNLSSAPSSTLRWAFLLAPGSRTVPRTAYWPR 133
GLATWKTPSQPATADAMLS*S RSAL SC+LS APSS LR AFL PGSRTVPRT W
Sbjct: 255 GLATWKTPSQPATADAMLS*SSRSALSSCSLSPAPSSALR*AFLALPGSRTVPRTV*WAL 76
Query: 132 ERRSFTSSDATKPPAPVTHT 73
ERRS TS +ATKPPAPVTHT
Sbjct: 75 ERRSLTSHEATKPPAPVTHT 16
Score = 191 bits (412), Expect = 6e-048
Identities = 102/176 (57%), Positives = 115/176 (65%)
Frame = +3 / +3
Query: 144 TRSAAPCATLVLARMPISRCWKELRKGCSFSRLI*WTTTALHQQLPAVRVSSM*LALSFP 323
T SAAPCA V+ RM ISR K L KGCS S L WTTTAL ++L AVR SSM LALS
Sbjct: 87 TLSAAPCAIPVMLRMLISRR*KVLGKGCSCSALTCWTTTALRRRLLAVRASSMLLALSLL 266
Query: 324 IDPPTLRWRS*LPL*QVQPMC*RLAMRQKLGELWWCLHVELCMLILFIRRVRCLMKTAGQ 503
+D PTLR + * L*Q MC*RLA RQKL EL CLHV LC IL R + L+KTAGQ
Sbjct: 267 VDRPTLRKKL*PLL*QAH*MC*RLATRQKLSELS*CLHVLLCSTILTGPRAKYLLKTAGQ 446
Query: 504 MRITAXXXXXXXXFPKHCRNEKLLLLQQKQGWTL*LFVRH*YLDP*CSLQ*I*AAK 671
RI A FPK ++ +LLL+Q+K GW L*LF H YL P*CS Q*+ A K
Sbjct: 447 TRICAERVRIGICFPKRAQSVRLLLMQRKLGWML*LFYHHWYLAP*CSQQ*MRAVK 614
Score = 177 bits (382), Expect = 8e-044
Identities = 91/163 (55%), Positives = 103/163 (63%)
Frame = -2 / -3
Query: 671 FRCSNLL*AASRVQILMTDKQLQRPALFLLQKQELLVPTVFWKLNTNPPSSCSNPHLTSS 492
F CS+ L AASR Q+ M + LQ P+ F L KQ+ FWK NTNP C++P LTS
Sbjct: 614 FYCSHSLLAASRGQVPMMVE*LQHPSQFSLHKQKPHALRAFWKANTNPHPFCTDPRLTSC 435
Query: 491 LHQTPYPSDK*D*HTQLHMKTPPQLA*LLPHSKPLTHWLYLLQREL*PPPQGWRVDGKGQ 312
L P *D TQ HMKT QLA*LLP KP TH + LLQ+ L* PQGW + KGQ
Sbjct: 434 LQ*ILCPWAS*DC*TQQHMKTL*QLA*LLPRCKPSTHSVCLLQQGL*LLPQGWSIYQKGQ 255
Query: 311 G*LHGRHPHSRQLLMQCCRSPSDQP*EAATFPQLLPAP*DGHS 183
G* HGR PHS+Q QCCRSP+ Q * AA FPQ L AP*D HS
Sbjct: 254 G*QHGRRPHSQQPPTQCCRSPAGQR*AAAAFPQHLLAP*DEHS 126
Score = 152 bits (327), Expect(2) = 1e-045
Identities = 70/115 (60%), Positives = 81/115 (70%)
Frame = -3 / -1
Query: 409 FCLIASL*HIGCTCYSGSYDLHLRVGGSMGKDRASYMEDTLTAGNC*CNAVVVHQISLEK 230
FCL+ASL HI C CYS Y+ LRVG S +DRAS MED LTA N NAVVV Q+S E+
Sbjct: 352 FCLVASLQHIQCACYSRGYNFFLRVGRSTRRDRASNMEDALTASNRRRNAVVVQQVSAEQ 173
Query: 229 LQPFLSSFQHLEMGILASTRVAHGAADRVLAPGEEELHQLRRDEAASAGHAHALP 65
LQPF S+F LEM IL+ T +AHGAAD V+ GEEEL + DEA+ AGHAH P
Sbjct: 172 LQPFPSTF*RLEMSILSITGIAHGAADSVVGLGEEELDEP*GDEASCAGHAHNAP 8
Score = 114 bits (244), Expect(3) = 2e-037
Identities = 57/113 (50%), Positives = 72/113 (63%)
Frame = +1 / +1
Query: 334 QP*GGGHSSRCNRYNQCVKGLL*GKS*ASCGGVFMWSCVC*SYLSEG*GV**RLLVR*GL 513
QP*G +S CNR+ +CV+GL GKS*ASC VFM CV S L++G + *R LVR G
Sbjct: 277 QP*GRSYSPCCNRHTECVEGLQRGKS*ASCHSVFMCCCVQQS*LAQGQSIY*RQLVRRGS 456
Query: 514 LQEEGGLVFSFQNTVGTRSSCFCSKNRAGRCNCLSVISIWTLDAAYSKFEQRN 672
+Q+ GLVF+FQN C CS+N G C+ ++I W LDAA S+ EQ N
Sbjct: 457 VQKG*GLVFAFQNARRA*GFCLCSENWDGCCSYSTIIGTWPLDAANSECEQ*N 615
Score = 54.2 bits (112), Expect(2) = 1e-045
Identities = 23/44 (52%), Positives = 30/44 (68%)
Frame = -3 / -1
Query: 676 DHFAAQIYCRLHQGSKY**RTNSYNVQPCFCCKSKSFSFRQCFG 545
++F A+I+C LHQG+KY * NSYN+ P F C SKS + FG
Sbjct: 619 ENFTARIHCWLHQGAKYQ*W*NSYNIHPSFRCISKSLTLCARFG 488
Score = 44.6 bits (91), Expect(3) = 2e-037
Identities = 19/29 (65%), Positives = 21/29 (72%)
Frame = +1 / +1
Query: 184 ECPSQGAGRS*GKVAASQG*SDGLRQHCI 270
EC SQGA R GK AA+Q * GLRQHC+
Sbjct: 127 ECSSQGARRCWGKAAAAQR*PAGLRQHCV 213
Score = 35.4 bits (71), Expect(3) = 2e-037
Identities = 13/19 (68%), Positives = 15/19 (78%)
Frame = +1 / +1
Query: 112 AGEAPPLPGPIRGPRHRAR 168
A +APPL GP+ PRHRAR
Sbjct: 55 ARQAPPLQGPLHCPRHRAR 111
>gb|BJ464137.1|BJ464137 BJ464137 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags33a09 5', mRNA sequence
Length = 663
Score = 374 bits (811), Expect = e-103
Identities = 161/217 (74%), Positives = 179/217 (82%)
Frame = +2 / +1
Query: 17 QREQRRVFKPKTMDPVRKSVCVTGAGGFVASELVKLLLSRGQYAVRGTVRDPGASKNAHL 196
+R+++R + R VCVTGAGGFVAS LVKLLLS+ Y VRGTVRDPG +KNAHL
Sbjct: 13 ERDRQRERRGMEAAAKRSVVCVTGAGGFVASWLVKLLLSKAHYTVRGTVRDPGNAKNAHL 192
Query: 197 KVLEGAEERLQLLKADLMDYDSIASAVAGCEGVFHVASPVLSHRPSNPEVEVIAPAVTGT 376
K LEGA ERLQLL ADL+DYDSIASAVAGCEGVFHVASPV S R +NPE EVIAPAVTGT
Sbjct: 193 KALEGAGERLQLLSADLLDYDSIASAVAGCEGVFHVASPVPSGRSTNPEEEVIAPAVTGT 372
Query: 377 TNVLKACYEAKVRRVVVVSSCGAVYANPIYPKGKVFDEDCWSDEDYCRKKEDWYLVSKTL 556
NVLKAC EAKV+RVV+VSSC AV+ NP +PKGKVF ED WSDED CRK EDWYL+SKT
Sbjct: 373 LNVLKACNEAKVKRVVIVSSCAAVFNNPNWPKGKVFTEDSWSDEDLCRKGEDWYLLSKTR 552
Query: 557 SEREALAFAAKTGLDVVTVCPSLVFGPLMQPTVNLSS 667
+EREA A+AAKTG+DVV + PSLV GPLMQPTVN SS
Sbjct: 553 AEREAFAYAAKTGMDVVAILPSLVLGPLMQPTVNASS 663
Score = 299 bits (648), Expect = 2e-080
Identities = 138/198 (69%), Positives = 147/198 (74%)
Frame = -1 / -2
Query: 666 LLKFTVGCIKGPNTNDGQTVTTSSPVFAAKARASRSDSVLETKYXXXXXXXXXXXXXXXX 487
LL FTVGCIKGP+TNDG+ TTS PVFAA A+ASRS VLE+KY
Sbjct: 662 LLAFTVGCIKGPSTNDGRIATTSIPVFAA*AKASRSARVLESKYQSSPFLHRSSSDQLSS 483
Query: 486 SNTLPFG*IGLAYTAPHEDTTTTRLTFAS*QAFNTLVVPVTAGAMTSTSGLEGRWERTGL 307
NTLP G +GL TA HEDT TTRLTFAS QAFNT VPVTAGA+TS+SGL E TGL
Sbjct: 482 VNTLPLGQLGLLNTAAHEDTMTTRLTFASLQAFNTFSVPVTAGAITSSSGLVDLPEGTGL 303
Query: 306 ATWKTPSQPATADAMLS*SIRSALRSCNLSSAPSSTLRWAFLLAPGSRTVPRTAYWPRER 127
ATWKTPSQPATADAMLS*S RSAL SC+LS APSS LR AFL PGSRTVPRT W ER
Sbjct: 302 ATWKTPSQPATADAMLS*SSRSALSSCSLSPAPSSALR*AFLALPGSRTVPRTV*WALER 123
Query: 126 RSFTSSDATKPPAPVTHT 73
RS TS +ATKPPAPVTHT
Sbjct: 122 RSLTSHEATKPPAPVTHT 69
Score = 189 bits (407), Expect = 3e-047
Identities = 100/172 (58%), Positives = 113/172 (65%)
Frame = +3 / +2
Query: 144 TRSAAPCATLVLARMPISRCWKELRKGCSFSRLI*WTTTALHQQLPAVRVSSM*LALSFP 323
T SAAPCA V+ RM ISR K L KGCS S L WTTTAL ++L AVR SSM LALS
Sbjct: 140 TLSAAPCAIPVMLRMLISRR*KVLGKGCSCSALTCWTTTALRRRLLAVRASSMLLALSLL 319
Query: 324 IDPPTLRWRS*LPL*QVQPMC*RLAMRQKLGELWWCLHVELCMLILFIRRVRCLMKTAGQ 503
+D PTLR + * L*Q MC*RLA RQKL EL CLHV LC IL R + L+KTAGQ
Sbjct: 320 VDRPTLRKKL*PLL*QAH*MC*RLATRQKLSELS*CLHVLLCSTILTGPRAKYLLKTAGQ 499
Query: 504 MRITAXXXXXXXXFPKHCRNEKLLLLQQKQGWTL*LFVRH*YLDP*CSLQ*I 659
RI A FPK ++ +LLL+Q+K GW L*LF H YL P*CS Q*+
Sbjct: 500 TRICAERVRIGICFPKRAQSVRLLLMQRKLGWML*LFYHHWYLAP*CSQQ*M 655
Score = 176 bits (378), Expect = 3e-043
Identities = 90/161 (55%), Positives = 102/161 (63%)
Frame = -2 / -3
Query: 665 CSNLL*AASRVQILMTDKQLQRPALFLLQKQELLVPTVFWKLNTNPPSSCSNPHLTSSLH 486
CS+ L AASR Q+ M + LQ P+ F L KQ+ FWK NTNP C++P LTS L
Sbjct: 661 CSHSLLAASRGQVPMMVE*LQHPSQFSLHKQKPHALRAFWKANTNPHPFCTDPRLTSCLQ 482
Query: 485 QTPYPSDK*D*HTQLHMKTPPQLA*LLPHSKPLTHWLYLLQREL*PPPQGWRVDGKGQG* 306
P *D TQ HMKT QLA*LLP KP TH + LLQ+ L* PQGW + KGQG*
Sbjct: 481 *ILCPWAS*DC*TQQHMKTL*QLA*LLPRCKPSTHSVCLLQQGL*LLPQGWSIYQKGQG* 302
Query: 305 LHGRHPHSRQLLMQCCRSPSDQP*EAATFPQLLPAP*DGHS 183
HGR PHS+Q QCCRSP+ Q * AA FPQ L AP*D HS
Sbjct: 301 QHGRRPHSQQPPTQCCRSPAGQR*AAAAFPQHLLAP*DEHS 179
Score = 153 bits (329), Expect(2) = 1e-044
Identities = 71/117 (60%), Positives = 82/117 (70%)
Frame = -3 / -1
Query: 409 FCLIASL*HIGCTCYSGSYDLHLRVGGSMGKDRASYMEDTLTAGNC*CNAVVVHQISLEK 230
FCL+ASL HI C CYS Y+ LRVG S +DRAS MED LTA N NAVVV Q+S E+
Sbjct: 405 FCLVASLQHIQCACYSRGYNFFLRVGRSTRRDRASNMEDALTASNRRRNAVVVQQVSAEQ 226
Query: 229 LQPFLSSFQHLEMGILASTRVAHGAADRVLAPGEEELHQLRRDEAASAGHAHALPHR 59
LQPF S+F LEM IL+ T +AHGAAD V+ GEEEL + DEA+ AGHAH P R
Sbjct: 225 LQPFPSTF*RLEMSILSITGIAHGAADSVVGLGEEELDEP*GDEASCAGHAHNAPLR 55
Score = 113 bits (242), Expect(3) = 4e-037
Identities = 56/111 (50%), Positives = 71/111 (63%)
Frame = +1 / +3
Query: 334 QP*GGGHSSRCNRYNQCVKGLL*GKS*ASCGGVFMWSCVC*SYLSEG*GV**RLLVR*GL 513
QP*G +S CNR+ +CV+GL GKS*ASC VFM CV S L++G + *R LVR G
Sbjct: 330 QP*GRSYSPCCNRHTECVEGLQRGKS*ASCHSVFMCCCVQQS*LAQGQSIY*RQLVRRGS 509
Query: 514 LQEEGGLVFSFQNTVGTRSSCFCSKNRAGRCNCLSVISIWTLDAAYSKFEQ 666
+Q+ GLVF+FQN C CS+N G C+ ++I W LDAA S+ EQ
Sbjct: 510 VQKG*GLVFAFQNARRA*GFCLCSENWDGCCSYSTIIGTWPLDAANSECEQ 662
Score = 50.1 bits (103), Expect(2) = 1e-044
Identities = 22/40 (55%), Positives = 27/40 (67%)
Frame = -3 / -1
Query: 664 AQIYCRLHQGSKY**RTNSYNVQPCFCCKSKSFSFRQCFG 545
A+I+C LHQG+KY * NSYN+ P F C SKS + FG
Sbjct: 660 ARIHCWLHQGAKYQ*W*NSYNIHPSFRCISKSLTLCARFG 541
Score = 44.6 bits (91), Expect(3) = 4e-037
Identities = 19/29 (65%), Positives = 21/29 (72%)
Frame = +1 / +3
Query: 184 ECPSQGAGRS*GKVAASQG*SDGLRQHCI 270
EC SQGA R GK AA+Q * GLRQHC+
Sbjct: 180 ECSSQGARRCWGKAAAAQR*PAGLRQHCV 266
Score = 35.4 bits (71), Expect(3) = 4e-037
Identities = 13/19 (68%), Positives = 15/19 (78%)
Frame = +1 / +3
Query: 112 AGEAPPLPGPIRGPRHRAR 168
A +APPL GP+ PRHRAR
Sbjct: 108 ARQAPPLQGPLHCPRHRAR 164
>gb|BJ464456.1|BJ464456 BJ464456 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags34g17 5', mRNA sequence
Length = 647
Score = 298 bits (645), Expect(2) = e-100
Identities = 125/161 (77%), Positives = 139/161 (86%)
Frame = +2 / +2
Query: 209 GAEERLQLLKADLMDYDSIASAVAGCEGVFHVASPVLSHRPSNPEVEVIAPAVTGTTNVL 388
GA ERLQLL ADL+DYDSIASAVAGCEGVFHVASPV S R +NPE EVIAPAVTGT NVL
Sbjct: 8 GAGERLQLLSADLLDYDSIASAVAGCEGVFHVASPVPSGRSTNPEEEVIAPAVTGTLNVL 187
Query: 389 KACYEAKVRRVVVVSSCGAVYANPIYPKGKVFDEDCWSDEDYCRKKEDWYLVSKTLSERE 568
KAC EAKV+RVV+VSSC AV+ NP +PKGKVF ED WSDED CRK EDWYL+SKT +ERE
Sbjct: 188 KACNEAKVKRVVIVSSCAAVFNNPNWPKGKVFTEDSWSDEDLCRKGEDWYLLSKTRAERE 367
Query: 569 ALAFAAKTGLDVVTVCPSLVFGPLMQPTVNLSSEMILKYFK 691
A A+AAKTG+DVV + PSLV GPLMQPTVN SS+++LKY K
Sbjct: 368 AFAYAAKTGMDVVAILPSLVLGPLMQPTVNASSKILLKYLK 490
Score = 232 bits (502), Expect(2) = 2e-075
Identities = 109/161 (67%), Positives = 118/161 (73%)
Frame = -1 / -3
Query: 690 LKYLRIISLLKFTVGCIKGPNTNDGQTVTTSSPVFAAKARASRSDSVLETKYXXXXXXXX 511
L+YLR I LL FTVGCIKGP+TNDG+ TTS PVFAA A+ASRS VLE+KY
Sbjct: 489 LRYLRRILLLAFTVGCIKGPSTNDGRIATTSIPVFAA*AKASRSARVLESKYQSSPFLHR 310
Query: 510 XXXXXXXXSNTLPFG*IGLAYTAPHEDTTTTRLTFAS*QAFNTLVVPVTAGAMTSTSGLE 331
NTLP G +GL TA HEDT TTRLTFAS QAFNT VPVTAGA+TS+SGL
Sbjct: 309 SSSDQLSSVNTLPLGQLGLLNTAAHEDTMTTRLTFASLQAFNTFSVPVTAGAITSSSGLV 130
Query: 330 GRWERTGLATWKTPSQPATADAMLS*SIRSALRSCNLSSAP 208
E TGLATWKTPSQPATADAMLS*S RSAL SC+LS AP
Sbjct: 129 DLPEGTGLATWKTPSQPATADAMLS*SSRSALSSCSLSPAP 7
Score = 175 bits (377), Expect(2) = 1e-048
Identities = 93/160 (58%), Positives = 105/160 (65%)
Frame = +3 / +3
Query: 213 LRKGCSFSRLI*WTTTALHQQLPAVRVSSM*LALSFPIDPPTLRWRS*LPL*QVQPMC*R 392
L KGCS S L WTTTAL ++L AVR SSM LALS +D PTLR + * L*Q MC*R
Sbjct: 12 LGKGCSCSALTCWTTTALRRRLLAVRASSMLLALSLLVDRPTLRKKL*PLL*QAH*MC*R 191
Query: 393 LAMRQKLGELWWCLHVELCMLILFIRRVRCLMKTAGQMRITAXXXXXXXXFPKHCRNEKL 572
LA RQKL EL CLHV LC IL R + L+KTAGQ RI A FPK ++ +L
Sbjct: 192 LATRQKLSELS*CLHVLLCSTILTGPRAKYLLKTAGQTRICAERVRIGICFPKRAQSVRL 371
Query: 573 LLLQQKQGWTL*LFVRH*YLDP*CSLQ*I*AAK*SLNISK 692
LL+Q+K GW L*LF H YL P*CS Q*+ A K S NISK
Sbjct: 372 LLMQRKLGWML*LFYHHWYLAP*CSQQ*MRAVKFSSNISK 491
Score = 174 bits (374), Expect(2) = 3e-051
Identities = 90/162 (55%), Positives = 103/162 (63%)
Frame = -2 / -1
Query: 692 L*NI*GSFRCSNLL*AASRVQILMTDKQLQRPALFLLQKQELLVPTVFWKLNTNPPSSCS 513
L*+I*G F CS+ L AASR Q+ M + LQ P+ F L KQ+ FWK NTNP C+
Sbjct: 491 L*DI*GEFYCSHSLLAASRGQVPMMVE*LQHPSQFSLHKQKPHALRAFWKANTNPHPFCT 312
Query: 512 NPHLTSSLHQTPYPSDK*D*HTQLHMKTPPQLA*LLPHSKPLTHWLYLLQREL*PPPQGW 333
+P LTS L P *D TQ HMKT QLA*LLP KP TH + LLQ+ L* PQGW
Sbjct: 311 DPRLTSCLQ*ILCPWAS*DC*TQQHMKTL*QLA*LLPRCKPSTHSVCLLQQGL*LLPQGW 132
Query: 332 RVDGKGQG*LHGRHPHSRQLLMQCCRSPSDQP*EAATFPQLL 207
+ KGQG* HGR PHS+Q QCCRSP+ Q * AA FPQ L
Sbjct: 131 SIYQKGQG*QHGRRPHSQQPPTQCCRSPAGQR*AAAAFPQHL 6
Score = 121 bits (259), Expect(3) = 2e-035
Identities = 61/120 (50%), Positives = 76/120 (63%)
Frame = +1 / +1
Query: 334 QP*GGGHSSRCNRYNQCVKGLL*GKS*ASCGGVFMWSCVC*SYLSEG*GV**RLLVR*GL 513
QP*G +S CNR+ +CV+GL GKS*ASC VFM CV S L++G + *R LVR G
Sbjct: 133 QP*GRSYSPCCNRHTECVEGLQRGKS*ASCHSVFMCCCVQQS*LAQGQSIY*RQLVRRGS 312
Query: 514 LQEEGGLVFSFQNTVGTRSSCFCSKNRAGRCNCLSVISIWTLDAAYSKFEQRNDP*IFQR 693
+Q+ GLVF+FQN C CS+N G C+ ++I W LDAA S+ EQ N P I QR
Sbjct: 313 VQKG*GLVFAFQNARRA*GFCLCSENWDGCCSYSTIIGTWPLDAANSECEQ*NSPQISQR 492
Score = 94.1 bits (199), Expect(2) = 4e-031
Identities = 42/67 (62%), Positives = 48/67 (71%)
Frame = -3 / -2
Query: 409 FCLIASL*HIGCTCYSGSYDLHLRVGGSMGKDRASYMEDTLTAGNC*CNAVVVHQISLEK 230
FCL+ASL HI C CYS Y+ LRVG S +DRAS MED LTA N NAVVV Q+S E+
Sbjct: 208 FCLVASLQHIQCACYSRGYNFFLRVGRSTRRDRASNMEDALTASNRRRNAVVVQQVSAEQ 29
Query: 229 LQPFLSS 209
LQPF S+
Sbjct: 28 LQPFPST 8
Score = 87.2 bits (184), Expect(2) = e-100
Identities = 37/49 (75%), Positives = 41/49 (83%)
Frame = +2 / +2
Query: 698 ETVENVLSNMVDIRDVADALLLTYEKPEASGRYICSSHAIKISDMINIL 844
ETVEN N+VD+RDVADALLL YE PEASGRYICS IK+SD+INIL
Sbjct: 500 ETVENRFWNLVDVRDVADALLLAYENPEASGRYICSPVRIKVSDVINIL 646
Score = 71.2 bits (149), Expect(2) = 2e-075
Identities = 32/49 (65%), Positives = 35/49 (71%)
Frame = -3 / -2
Query: 844 QYVYHIRNFYCM*TADVSSRRFWLFVSQKKSISNITNIHHITEYIFNSL 698
Q VY IRNFY TADV SR W+F+ QKKSI NIT+IH I E IF SL
Sbjct: 646 QNVYDIRNFYSYWTADVPSRCLWIFICQKKSIGNITDIH*IPESIFYSL 500
Score = 64.3 bits (134), Expect(2) = 4e-031
Identities = 27/49 (55%), Positives = 35/49 (71%)
Frame = -3 / -2
Query: 691 FEIFKDHFAAQIYCRLHQGSKY**RTNSYNVQPCFCCKSKSFSFRQCFG 545
FEIF+++F A+I+C LHQG+KY * NSYN+ P F C SKS + FG
Sbjct: 490 FEIFEENFTARIHCWLHQGAKYQ*W*NSYNIHPSFRCISKSLTLCARFG 344
Score = 48.7 bits (100), Expect(2) = 3e-051
Identities = 23/50 (46%), Positives = 25/50 (50%)
Frame = -1 / -3
Query: 840 MFIISEIFIACELQMYRPDASGFXXXXXXXXXXXXXXXILLSTFSTVSRS 691
MF+ SE FI LQMYRPDASGF + FSTVS S
Sbjct: 642 MFMTSETFIRTGLQMYRPDASGFSYARRRASATSRTSTRFQNLFSTVSCS 493
Score = 38.6 bits (78), Expect(2) = 1e-048
Identities = 13/24 (54%), Positives = 19/24 (79%)
Frame = +1 / +1
Query: 772 KARSVWTIHLQFTCNKNF*YDKHT 843
K+R +WT+HLQ + NK+F* KH+
Sbjct: 574 KSRGIWTVHLQSSTNKSF*CHKHS 645
Score = 35.4 bits (71), Expect(3) = 2e-035
Identities = 22/49 (44%), Positives = 28/49 (57%)
Frame = +3 / +3
Query: 699 RLLKMYSVIWWIFVXXXXXXXXXTKSQKRLDDTSAVHMQ*KFLI**TY* 845
RL K+ S I W+ V K Q+ LD TSAV +*KFL+ *T+*
Sbjct: 501 RL*KIDSGI*WMSVMLPMLFFWHMKIQRHLDGTSAVQYE*KFLMS*TF* 647
Score = 30.9 bits (61), Expect(3) = 2e-035
Identities = 12/18 (66%), Positives = 14/18 (77%)
Frame = +1 / +1
Query: 217 GKVAASQG*SDGLRQHCI 270
GK AA+Q * GLRQHC+
Sbjct: 16 GKAAAAQR*PAGLRQHCV 69
>gb|AV918145.1|AV918145 AV918145 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags20a13 3', mRNA sequence
Length = 767
Score = 188 bits (404), Expect(3) = 4e-094
Identities = 79/109 (72%), Positives = 91/109 (83%)
Frame = +2 / -3
Query: 698 ETVENVLSNMVDIRDVADALLLTYEKPEASGRYICSSHAIKISDMINILKTMYPSYPYPK 877
ETVEN N+VD+RDVADALLL YE PEASGRYICS IK+SD+INILKT+YP+Y YPK
Sbjct: 429 ETVENRFWNLVDVRDVADALLLAYENPEASGRYICSPVRIKVSDVINILKTLYPTYTYPK 250
Query: 878 NFVEDDVNSVYSSEKLQKLGWTFKPIEESLRDTVESYKAFGILN*TSN* 1024
NF E + V SSEKLQKLGWTF+P+E++L D+VESYKA GILN* SN*
Sbjct: 249 NFTEVEEGKVMSSEKLQKLGWTFRPVEKTLGDSVESYKASGILN*ASN* 103
Score = 174 bits (374), Expect(3) = 4e-094
Identities = 69/95 (72%), Positives = 81/95 (85%)
Frame = +2 / -3
Query: 407 KVRRVVVVSSCGAVYANPIYPKGKVFDEDCWSDEDYCRKKEDWYLVSKTLSEREALAFAA 586
KV+RVV+VSSC AV+ NP +PKGKVF ED WSDED CRK EDWYL+SKT +EREA A+AA
Sbjct: 723 KVKRVVIVSSCAAVFNNPNWPKGKVFTEDSWSDEDLCRKGEDWYLLSKTRAEREAFAYAA 544
Query: 587 KTGLDVVTVCPSLVFGPLMQPTVNLSSEMILKYFK 691
KTG+DVV + PSLV GPLMQPTVN SS+++LKY K
Sbjct: 543 KTGMDVVAILPSLVLGPLMQPTVNASSKILLKYLK 439
Score = 146 bits (314), Expect(2) = 9e-066
Identities = 67/109 (61%), Positives = 77/109 (70%)
Frame = -3 / +1
Query: 1024 LVGCSIQDAKCLVGFNSVTEGFLYRLEGPPQLLQFLRAVYRVDIIFHKIFGIRVRRIHGL 845
LVGCS+QDA+C VGF++V+EG LYR EGPP LL+FLR K+FGI V I GL
Sbjct: 103 LVGCSVQDARCFVGFDTVSEGLLYRPEGPP*LLKFLRTHNFTFFHLRKVFGISVCWI*GL 282
Query: 844 QYVYHIRNFYCM*TADVSSRRFWLFVSQKKSISNITNIHHITEYIFNSL 698
Q VY IRNFY TADV SR W+F+ QKKSI NIT+IH I E IF SL
Sbjct: 283 QNVYDIRNFYSYWTADVPSRCLWIFICQKKSIGNITDIH*IPESIFYSL 429
Score = 124 bits (266), Expect(2) = 9e-066
Identities = 57/95 (60%), Positives = 63/95 (66%)
Frame = -1 / +2
Query: 690 LKYLRIISLLKFTVGCIKGPNTNDGQTVTTSSPVFAAKARASRSDSVLETKYXXXXXXXX 511
L+YLR I LL FTVGCIKGP+TNDG+ TTS PVFAA A+ASRS VLE+KY
Sbjct: 440 LRYLRRILLLAFTVGCIKGPSTNDGRIATTSIPVFAA*AKASRSARVLESKYQSSPFLHR 619
Query: 510 XXXXXXXXSNTLPFG*IGLAYTAPHEDTTTTRLTF 406
NTLP G +GL TA HEDT TTRLTF
Sbjct: 620 SSSDQLSSVNTLPLGQLGLLNTAAHEDTMTTRLTF 724
Score = 112 bits (240), Expect(2) = 2e-049
Identities = 60/114 (52%), Positives = 71/114 (62%)
Frame = +3 / -1
Query: 699 RLLKMYSVIWWIFVXXXXXXXXXTKSQKRLDDTSAVHMQ*KFLI**TY*RPCIRLTLIPK 878
RL K+ S I W+ V K Q+ LD TSAV +*KFL+ *T+*RP I+ TLIPK
Sbjct: 428 RL*KIDSGI*WMSVMLPMLFFWHMKIQRHLDGTSAVQYE*KFLMS*TF*RPYIQHTLIPK 249
Query: 879 ILWKMMSTLYTALRNCRSWGGPSSL*RNPSVTLLNPTRHLAS*IEHPTRTVSIC 1040
L + LRN RS GGPS L*R PS T+ NPT+HLAS* EHPTR + C
Sbjct: 248 TLRRWKKVKL*VLRNFRS*GGPSGL*RRPSETVSNPTKHLAS*TEHPTRENNAC 87
Score = 110 bits (235), Expect(2) = 7e-044
Identities = 57/111 (51%), Positives = 61/111 (54%)
Frame = -1 / +2
Query: 1023 *LDVQFRMPNAL*DSTVSRRDSSIGLKVHPSFCXXXXXXXXXXXXXTKFLG*G*DGYMVF 844
*LD QFRMP+AL*DST+S R S GLKVHPSF KFLG* GY VF
Sbjct: 104 *LDAQFRMPDAL*DSTLSPRVFSTGLKVHPSF*SFSELITLPSSTSVKFLG*VYVGYKVF 283
Query: 843 SMFIISEIFIACELQMYRPDASGFXXXXXXXXXXXXXXXILLSTFSTVSRS 691
MF+ SE FI LQMYRPDASGF + FSTVS S
Sbjct: 284 RMFMTSETFIRTGLQMYRPDASGFSYARRRASATSRTSTRFQNLFSTVSCS 436
Score = 104 bits (221), Expect(2) = 2e-049
Identities = 53/96 (55%), Positives = 61/96 (63%)
Frame = +3 / -1
Query: 405 QKLGELWWCLHVELCMLILFIRRVRCLMKTAGQMRITAXXXXXXXXFPKHCRNEKLLLLQ 584
QKL EL CLHV LC IL R + L+KTAGQ RI A FPK ++ +LLL+Q
Sbjct: 725 QKLSELS*CLHVLLCSTILTGPRAKYLLKTAGQTRICAERVRIGICFPKRAQSVRLLLMQ 546
Query: 585 QKQGWTL*LFVRH*YLDP*CSLQ*I*AAK*SLNISK 692
+K GW L*LF H YL P*CS Q*+ A K S NISK
Sbjct: 545 RKLGWML*LFYHHWYLAP*CSQQ*MRAVKFSSNISK 438
Score = 102 bits (218), Expect(2) = 2e-042
Identities = 47/85 (55%), Positives = 59/85 (69%)
Frame = +1 / -2
Query: 772 KARSVWTIHLQFTCNKNF*YDKHTEDHVSVLPLSQKFCGR*CQLCIQL*ETAEAGVDLQA 951
K+R +WT+HLQ + NK+F* KH+ED +S + LSQK G + + *ET+EA VDLQA
Sbjct: 355 KSRGIWTVHLQSSTNKSF*CHKHSEDLISNIHLSQKLYGGGRR*SYEF*ETSEARVDLQA 176
Query: 952 YRGIPP*HC*ILQGIWHPELNIQLG 1026
R P C ILQ IWHPEL+IQLG
Sbjct: 175 CREDPRRQCRILQSIWHPELSIQLG 101
Score = 90.9 bits (192), Expect(2) = 2e-042
Identities = 48/96 (50%), Positives = 59/96 (61%)
Frame = +1 / -2
Query: 406 KS*ASCGGVFMWSCVC*SYLSEG*GV**RLLVR*GLLQEEGGLVFSFQNTVGTRSSCFCS 585
KS*ASC VFM CV S L++G + *R LVR G +Q+ GLVF+FQN C CS
Sbjct: 724 KS*ASCHSVFMCCCVQQS*LAQGQSIY*RQLVRRGSVQKG*GLVFAFQNARRA*GFCLCS 545
Query: 586 KNRAGRCNCLSVISIWTLDAAYSKFEQRNDP*IFQR 693
+N G C+ ++I W LDAA S+ EQ N P I QR
Sbjct: 544 ENWDGCCSYSTIIGTWPLDAANSECEQ*NSPQISQR 437
Score = 87.7 bits (185), Expect(2) = 7e-044
Identities = 50/96 (52%), Positives = 58/96 (60%)
Frame = -2 / +3
Query: 692 L*NI*GSFRCSNLL*AASRVQILMTDKQLQRPALFLLQKQELLVPTVFWKLNTNPPSSCS 513
L*+I*G F CS+ L AASR Q+ M + LQ P+ F L KQ+ FWK NTNP C+
Sbjct: 438 L*DI*GEFYCSHSLLAASRGQVPMMVE*LQHPSQFSLHKQKPHALRAFWKANTNPHPFCT 617
Query: 512 NPHLTSSLHQTPYPSDK*D*HTQLHMKTPPQLA*LL 405
+P LTS L P *D TQ HMKT QLA*LL
Sbjct: 618 DPRLTSCLQ*ILCPWAS*DC*TQQHMKTL*QLA*LL 725
Score = 64.3 bits (134), Expect(3) = 4e-029
Identities = 27/49 (55%), Positives = 35/49 (71%)
Frame = -3 / +1
Query: 691 FEIFKDHFAAQIYCRLHQGSKY**RTNSYNVQPCFCCKSKSFSFRQCFG 545
FEIF+++F A+I+C LHQG+KY * NSYN+ P F C SKS + FG
Sbjct: 439 FEIFEENFTARIHCWLHQGAKYQ*W*NSYNIHPSFRCISKSLTLCARFG 585
Score = 56.5 bits (117), Expect(3) = 4e-029
Identities = 25/38 (65%), Positives = 28/38 (73%)
Frame = -2 / +3
Query: 1025 PSWMFNSGCQMPCRIQQCHGGIPL*A*RSTPASAVSQS 912
PSWM +SGCQM CRI+ C G L A*RST AS VSQ+
Sbjct: 102 PSWMLSSGCQMLCRIRHCLRGSSLQA*RSTLASEVSQN 215
Score = 46.0 bits (94), Expect(3) = 4e-029
Identities = 20/39 (51%), Positives = 24/39 (61%)
Frame = -2 / +3
Query: 887 PQNFWDKGKTDTWSSVCLSYQKFLLHVNCRCIVQTLLAF 771
P +FWDK D SS CL +QK L ++CRC VQ L F
Sbjct: 240 P*SFWDKCMLDIRSSECL*HQKLLFVLDCRCTVQMPLDF 356
Score = 23.1 bits (44), Expect(3) = 4e-094
Identities = 9/10 (90%), Positives = 9/10 (90%)
Frame = +2 / -2
Query: 380 NVLKACYEAK 409
NVLKAC EAK
Sbjct: 751 NVLKACNEAK 722
>gb|CA013907.1|CA013907 HT09N23r HT Hordeum vulgare subsp. vulgare cDNA clone HT09N23
5-PRIME, mRNA sequence
Length = 636
Score = 229 bits (495), Expect(2) = 1e-089
Identities = 96/130 (73%), Positives = 107/130 (82%)
Frame = +2 / +3
Query: 302 VASPVLSHRPSNPEVEVIAPAVTGTTNVLKACYEAKVRRVVVVSSCGAVYANPIYPKGKV 481
VASPV S R +NPE EVIAPAVTGT NVLKACYEAKV+RVV+VSS AV NP +PKGK
Sbjct: 27 VASPVPSGRSTNPEEEVIAPAVTGTLNVLKACYEAKVKRVVMVSSVAAVSNNPNWPKGKF 206
Query: 482 FDEDCWSDEDYCRKKEDWYLVSKTLSEREALAFAAKTGLDVVTVCPSLVFGPLMQPTVNL 661
FDED WSDED CRK EDWY +SKTL+EREA A+A KTGLDVVT+CPSLV GPLMQ TVN
Sbjct: 207 FDEDSWSDEDLCRKGEDWYFLSKTLAEREAFAYAEKTGLDVVTICPSLVIGPLMQSTVNT 386
Query: 662 SSEMILKYFK 691
SS +++ Y K
Sbjct: 387 SSNILINYLK 416
Score = 152 bits (326), Expect(2) = 3e-059
Identities = 78/130 (60%), Positives = 85/130 (65%)
Frame = -1 / -3
Query: 690 LKYLRIISLLKFTVGCIKGPNTNDGQTVTTSSPVFAAKARASRSDSVLETKYXXXXXXXX 511
L+ L I LL FTV CIKGP TNDG VTTS+PVF+A A+ASRS SVLE KY
Sbjct: 415 LR*LMRILLLVFTVDCIKGPITNDGHIVTTSNPVFSA*AKASRSASVLERKYQSSPFLQR 236
Query: 510 XXXXXXXXSNTLPFG*IGLAYTAPHEDTTTTRLTFAS*QAFNTLVVPVTAGAMTSTSGLE 331
S LP G +GL TA EDT TTRLTFAS*QAF T VPVTAGA+TS+SGL
Sbjct: 235 SSSDQLSSSKNLPLGQLGLLDTAATEDTMTTRLTFAS*QAFKTFSVPVTAGAITSSSGLV 56
Query: 330 GRWERTGLAT 301
E TGLAT
Sbjct: 55 DLPEGTGLAT 26
Score = 121 bits (259), Expect(2) = 1e-089
Identities = 47/62 (75%), Positives = 56/62 (90%)
Frame = +2 / +3
Query: 698 ETVENVLSNMVDIRDVADALLLTYEKPEASGRYICSSHAIKISDMINILKTMYPSYPYPK 877
+TVEN L N+VD+RDVADALLL YEKPEASGRYICSS +K+SDMI++LKT+YP+Y YPK
Sbjct: 426 DTVENKLRNLVDVRDVADALLLAYEKPEASGRYICSSVPVKVSDMISVLKTLYPTYTYPK 605
Query: 878 NF 883
NF
Sbjct: 606 NF 611
Score = 113 bits (242), Expect(2) = 4e-037
Identities = 58/120 (48%), Positives = 73/120 (60%)
Frame = +1 / +2
Query: 334 QP*GGGHSSRCNRYNQCVKGLL*GKS*ASCGGVFMWSCVC*SYLSEG*GV**RLLVR*GL 513
Q *G +S CNR+ +C++ LL G+S*ASC G+F CV *S L+ G + *R LVR G
Sbjct: 59 QS*GRSYSPCCNRHTECLESLLRGES*ASCHGIFSCCCVQ*S*LA*GQILR*RQLVRRGS 238
Query: 514 LQEEGGLVFSFQNTVGTRSSCFCSKNRAGRCNCLSVISIWTLDAAYSKFEQRNDP*IFQR 693
LQ+ GLVF FQN C C KN G CN + ++ W LDA YSK+EQ *+ QR
Sbjct: 239 LQKG*GLVFPFQNARRA*GFCLCRKNWVGCCNYMPIVGNWPLDAVYSKYEQ*YSH*LSQR 418
Score = 111 bits (238), Expect(2) = 6e-035
Identities = 66/134 (49%), Positives = 80/134 (59%)
Frame = +3 / +1
Query: 306 LALSFPIDPPTLRWRS*LPL*QVQPMC*RLAMRQKLGELWWCLHVELCMLILFIRRVRCL 485
LALS D P LR + * L*Q M *+LA R+KL EL W L + LC +IL R
Sbjct: 31 LALSLLADQPILRKKL*PLL*QAH*MS*KLATRRKLSELSWYLQLLLCPIILTGLRANSS 210
Query: 486 MKTAGQMRITAXXXXXXXXFPKHCRNEKLLLLQQKQGWTL*LFVRH*YLDP*CSLQ*I*A 665
MKTAGQ RI+A FPK ++ +LLL+Q+K GW L*L+ L P*CSLQ*I A
Sbjct: 211 MKTAGQTRISAERVRIGISFPKRSQSVRLLLMQKKLGWML*LYAHRW*LAP*CSLQ*IRA 390
Query: 666 AK*SLNISKISRLL 707
SL ISK + +L
Sbjct: 391 VIFSLIISKENVIL 432
Score = 105 bits (223), Expect(2) = 6e-038
Identities = 59/122 (48%), Positives = 68/122 (55%)
Frame = -2 / -1
Query: 671 FRCSNLL*AASRVQILMTDKQLQRPALFLLQKQELLVPTVFWKLNTNPPSSCSNPHLTSS 492
+ CS LL* ASR Q+ LQ P F L KQ+ FWK NTNP C +P LTS
Sbjct: 396 YYCSYLL*TASRGQLPTMGI*LQHPTQFFLHKQKPHALRAFWKGNTNPHPFCRDPRLTSC 217
Query: 491 LHQTPYPSDK*D*HTQLHMKTPPQLA*LLPHSKPLTHWLYLLQREL*PPPQGWRVDGKGQ 312
LH+ P *D TQ +K P QLA*L P SK H + LLQ+ L* PQ W + KGQ
Sbjct: 216 LHRRICP*AS*DYWTQQQLKIP*QLA*LSPRSKLSRHSVCLLQQGL*LLPQDWLICQKGQ 37
Query: 311 G* 306
G*
Sbjct: 36 G* 31
Score = 97.3 bits (206), Expect(2) = 3e-059
Identities = 42/62 (67%), Positives = 47/62 (75%)
Frame = -3 / -2
Query: 883 KIFGIRVRRIHGLQYVYHIRNFYCM*TADVSSRRFWLFVSQKKSISNITNIHHITEYIFN 704
K+FGI V RI GLQY YHIR+FY *TADV SRR W F+ Q KSI NITNIH I E+IF
Sbjct: 611 KVFGISVCRI*GLQYAYHIRDFYWY*TADVPSRRLWFFICQ*KSIGNITNIH*IPEFIFY 432
Query: 703 SL 698
S+
Sbjct: 431 SI 426
Score = 73.5 bits (154), Expect(2) = 6e-038
Identities = 36/64 (56%), Positives = 36/64 (56%)
Frame = -1 / -3
Query: 882 KFLG*G*DGYMVFSMFIISEIFIACELQMYRPDASGFXXXXXXXXXXXXXXXILLSTFST 703
KFLG* GY VFS IISE F ELQMYRPDASGF LS FST
Sbjct: 610 KFLG*VYVGYKVFSTLIISETFTGTELQMYRPDASGFSYANRRASATSRTSTRFLSLFST 431
Query: 702 VSRS 691
VSRS
Sbjct: 430 VSRS 419
Score = 62.0 bits (129), Expect(2) = 4e-037
Identities = 34/59 (57%), Positives = 38/59 (64%)
Frame = +3 / +1
Query: 708 KMYSVIWWIFVXXXXXXXXXTKSQKRLDDTSAVHMQ*KFLI**TY*RPCIRLTLIPKIL 884
K+ S I W+FV K+Q+RLD TSAV Q*K LI** Y*RP IR TLIPK L
Sbjct: 436 KINSGI*WMFVMLPMLFYWHMKNQRRLDGTSAVQYQ*KSLI**AY*RPYIRHTLIPKTL 612
Score = 62.0 bits (129), Expect(3) = 3e-026
Identities = 25/49 (51%), Positives = 32/49 (65%)
Frame = -3 / -2
Query: 691 FEIFKDHFAAQIYCRLHQGSKY**RTNSYNVQPCFCCKSKSFSFRQCFG 545
FEI ++ A+IYCRLHQG+ Y SYN+QP F C SKS + + FG
Sbjct: 416 FEIINENITARIYCRLHQGANYQRWAYSYNIQPSFFCISKSLTLCERFG 270
Score = 57.4 bits (119), Expect(3) = 3e-026
Identities = 24/38 (63%), Positives = 28/38 (73%)
Frame = -2 / -1
Query: 884 QNFWDKGKTDTWSSVCLSYQKFLLHVNCRCIVQTLLAF 771
Q+FWDK +D SSV LSYQ+ LL +NCRC VQT L F
Sbjct: 612 QSFWDKCMSDIRSSVRLSYQRLLLVLNCRCTVQTPLVF 499
Score = 56.5 bits (117), Expect(2) = 6e-035
Identities = 22/36 (61%), Positives = 28/36 (77%)
Frame = +1 / +2
Query: 772 KARSVWTIHLQFTCNKNF*YDKHTEDHVSVLPLSQK 879
K R VWT+HLQF+ +K+ *YDK TED +S + LSQK
Sbjct: 500 KTRGVWTVHLQFSTSKSL*YDKRTEDLISDIHLSQK 607
Score = 41.8 bits (85), Expect(3) = 3e-026
Identities = 18/35 (51%), Positives = 22/35 (62%)
Frame = -3 / -2
Query: 409 FCLIASL*HIGCTCYSGSYDLHLRVGGSMGKDRAS 305
F L+AS I C CYS Y+ LR+G S +DRAS
Sbjct: 134 FRLVASFQDIQCACYSRGYNFFLRIG*SARRDRAS 30
>gb|AV915311.1|AV915311 AV915311 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags13n08 5', mRNA sequence
Length = 578
Score = 330 bits (714), Expect = 1e-089
Identities = 140/175 (80%), Positives = 152/175 (86%)
Frame = +2 / +2
Query: 74 VCVTGAGGFVASELVKLLLSRGQYAVRGTVRDPGASKNAHLKVLEGAEERLQLLKADLMD 253
VCVTGAGGFVAS LVKLLLS+ Y VRGTVRDPG +KNAHLK LEGA ERLQLL ADL+D
Sbjct: 53 VCVTGAGGFVASWLVKLLLSKAHYTVRGTVRDPGNAKNAHLKALEGAGERLQLLSADLLD 232
Query: 254 YDSIASAVAGCEGVFHVASPVLSHRPSNPEVEVIAPAVTGTTNVLKACYEAKVRRVVVVS 433
YDSIASAVAGCEGVFHVASPV S R +NPE EVIAPAVTGT NVLKAC EAKV+RVV+VS
Sbjct: 233 YDSIASAVAGCEGVFHVASPVPSGRSTNPEEEVIAPAVTGTLNVLKACNEAKVKRVVIVS 412
Query: 434 SCGAVYANPIYPKGKVFDEDCWSDEDYCRKKEDWYLVSKTLSEREALAFAAKTGL 598
SC AV+ NP +PKGKVF ED WSDED CRK EDWYL+SKT +EREA A+AAKTG+
Sbjct: 413 SCAAVFNNPNWPKGKVFTEDSWSDEDLCRKGEDWYLLSKTRAEREAFAYAAKTGM 577
Score = 256 bits (553), Expect = 2e-067
Identities = 120/174 (68%), Positives = 127/174 (72%)
Frame = -1 / -3
Query: 594 PVFAAKARASRSDSVLETKYXXXXXXXXXXXXXXXXSNTLPFG*IGLAYTAPHEDTTTTR 415
PVFAA A+ASRS VLE+KY NTLP G +GL TA HEDT TTR
Sbjct: 573 PVFAA*AKASRSARVLESKYQSSPFLHRSSSDQLSSVNTLPLGQLGLLNTAAHEDTMTTR 394
Query: 414 LTFAS*QAFNTLVVPVTAGAMTSTSGLEGRWERTGLATWKTPSQPATADAMLS*SIRSAL 235
LTFAS QAFNT VPVTAGA+TS+SGL E TGLATWKTPSQPATADAMLS*S RSAL
Sbjct: 393 LTFASLQAFNTFSVPVTAGAITSSSGLVDLPEGTGLATWKTPSQPATADAMLS*SSRSAL 214
Query: 234 RSCNLSSAPSSTLRWAFLLAPGSRTVPRTAYWPRERRSFTSSDATKPPAPVTHT 73
SC+LS APSS LR AFL PGSRTVPRT W ERRS TS +ATKPPAPVTHT
Sbjct: 213 SSCSLSPAPSSALR*AFLALPGSRTVPRTV*WALERRSLTSHEATKPPAPVTHT 52
Score = 165 bits (355), Expect = 4e-040
Identities = 87/152 (57%), Positives = 99/152 (65%)
Frame = +3 / +3
Query: 144 TRSAAPCATLVLARMPISRCWKELRKGCSFSRLI*WTTTALHQQLPAVRVSSM*LALSFP 323
T SAAPCA V+ RM ISR K L KGCS S L WTTTAL ++L AVR SSM LALS
Sbjct: 123 TLSAAPCAIPVMLRMLISRR*KVLGKGCSCSALTCWTTTALRRRLLAVRASSMLLALSLL 302
Query: 324 IDPPTLRWRS*LPL*QVQPMC*RLAMRQKLGELWWCLHVELCMLILFIRRVRCLMKTAGQ 503
+D PTLR + * L*Q MC*RLA RQKL EL CLHV LC IL R + L+KTAGQ
Sbjct: 303 VDRPTLRKKL*PLL*QAH*MC*RLATRQKLSELS*CLHVLLCSTILTGPRAKYLLKTAGQ 482
Query: 504 MRITAXXXXXXXXFPKHCRNEKLLLLQQKQGW 599
RI A FPK ++ +LLL+Q+K GW
Sbjct: 483 TRICAERVRIGICFPKRAQSVRLLLMQRKLGW 578
Score = 158 bits (340), Expect = 5e-038
Identities = 79/139 (56%), Positives = 88/139 (63%)
Frame = -2 / -1
Query: 599 PALFLLQKQELLVPTVFWKLNTNPPSSCSNPHLTSSLHQTPYPSDK*D*HTQLHMKTPPQ 420
P+ F L KQ+ FWK NTNP C++P LTS L P *D TQ HMKT Q
Sbjct: 578 PSQFSLHKQKPHALRAFWKANTNPHPFCTDPRLTSCLQ*ILCPWAS*DC*TQQHMKTL*Q 399
Query: 419 LA*LLPHSKPLTHWLYLLQREL*PPPQGWRVDGKGQG*LHGRHPHSRQLLMQCCRSPSDQ 240
LA*LLP KP TH + LLQ+ L* PQGW + KGQG* HGR PHS+Q QCCRSP+ Q
Sbjct: 398 LA*LLPRCKPSTHSVCLLQQGL*LLPQGWSIYQKGQG*QHGRRPHSQQPPTQCCRSPAGQ 219
Query: 239 P*EAATFPQLLPAP*DGHS 183
* AA FPQ L AP*D HS
Sbjct: 218 R*AAAAFPQHLLAP*DEHS 162
Score = 150 bits (323), Expect = 1e-035
Identities = 69/112 (61%), Positives = 80/112 (71%)
Frame = -3 / -2
Query: 409 FCLIASL*HIGCTCYSGSYDLHLRVGGSMGKDRASYMEDTLTAGNC*CNAVVVHQISLEK 230
FCL+ASL HI C CYS Y+ LRVG S +DRAS MED LTA N NAVVV Q+S E+
Sbjct: 388 FCLVASLQHIQCACYSRGYNFFLRVGRSTRRDRASNMEDALTASNRRRNAVVVQQVSAEQ 209
Query: 229 LQPFLSSFQHLEMGILASTRVAHGAADRVLAPGEEELHQLRRDEAASAGHAH 74
LQPF S+F LEM IL+ T +AHGAAD V+ GEEEL + DEA+ AGHAH
Sbjct: 208 LQPFPSTF*RLEMSILSITGIAHGAADSVVGLGEEELDEP*GDEASCAGHAH 53
Score = 90.9 bits (192), Expect(3) = 2e-030
Identities = 45/86 (52%), Positives = 56/86 (65%)
Frame = +1 / +1
Query: 334 QP*GGGHSSRCNRYNQCVKGLL*GKS*ASCGGVFMWSCVC*SYLSEG*GV**RLLVR*GL 513
QP*G +S CNR+ +CV+GL GKS*ASC VFM CV S L++G + *R LVR G
Sbjct: 313 QP*GRSYSPCCNRHTECVEGLQRGKS*ASCHSVFMCCCVQQS*LAQGQSIY*RQLVRRGS 492
Query: 514 LQEEGGLVFSFQNTVGTRSSCFCSKN 591
+Q+ GLVF+FQN C CS+N
Sbjct: 493 VQKG*GLVFAFQNARRA*GFCLCSEN 570
Score = 44.6 bits (91), Expect(3) = 2e-030
Identities = 19/29 (65%), Positives = 21/29 (72%)
Frame = +1 / +1
Query: 184 ECPSQGAGRS*GKVAASQG*SDGLRQHCI 270
EC SQGA R GK AA+Q * GLRQHC+
Sbjct: 163 ECSSQGARRCWGKAAAAQR*PAGLRQHCV 249
Score = 35.4 bits (71), Expect(3) = 2e-030
Identities = 13/19 (68%), Positives = 15/19 (78%)
Frame = +1 / +1
Query: 112 AGEAPPLPGPIRGPRHRAR 168
A +APPL GP+ PRHRAR
Sbjct: 91 ARQAPPLQGPLHCPRHRAR 147
>gb|AV914084.1|AV914084 AV914084 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags4k02 5', mRNA sequence
Length = 593
Score = 192 bits (413), Expect(2) = 1e-088
Identities = 77/104 (74%), Positives = 89/104 (85%)
Frame = +2 / +3
Query: 380 NVLKACYEAKVRRVVVVSSCGAVYANPIYPKGKVFDEDCWSDEDYCRKKEDWYLVSKTLS 559
NVLKAC EAKV+RVV+VSSC AV+ NP +PKGKVF ED WSDED CRK EDWYL+SKT +
Sbjct: 12 NVLKACNEAKVKRVVIVSSCAAVFNNPNWPKGKVFTEDSWSDEDLCRKGEDWYLLSKTRA 191
Query: 560 EREALAFAAKTGLDVVTVCPSLVFGPLMQPTVNLSSEMILKYFK 691
EREA A+AAKTG+DVV + PSLV GPLMQPTVN SS+++LKY K
Sbjct: 192 EREAFAYAAKTGMDVVAILPSLVLGPLMQPTVNASSKILLKYLK 323
Score = 155 bits (334), Expect(2) = 1e-088
Identities = 63/87 (72%), Positives = 72/87 (82%)
Frame = +2 / +3
Query: 698 ETVENVLSNMVDIRDVADALLLTYEKPEASGRYICSSHAIKISDMINILKTMYPSYPYPK 877
ETVEN N+VD+RDVADALLL YE PEASGRYICS IK+SD+INILKT+YP+Y YPK
Sbjct: 333 ETVENRFWNLVDVRDVADALLLAYENPEASGRYICSPVRIKVSDVINILKTLYPTYTYPK 512
Query: 878 NFVEDDVNSVYSSEKLQKLGWTFKPIE 958
NF E + V SSEKLQKLGWTF+P+E
Sbjct: 513 NFTEVEEGKVMSSEKLQKLGWTFRPVE 593
Score = 140 bits (300), Expect(2) = 4e-058
Identities = 65/104 (62%), Positives = 71/104 (68%)
Frame = -1 / -2
Query: 690 LKYLRIISLLKFTVGCIKGPNTNDGQTVTTSSPVFAAKARASRSDSVLETKYXXXXXXXX 511
L+YLR I LL FTVGCIKGP+TNDG+ TTS PVFAA A+ASRS VLE+KY
Sbjct: 322 LRYLRRILLLAFTVGCIKGPSTNDGRIATTSIPVFAA*AKASRSARVLESKYQSSPFLHR 143
Query: 510 XXXXXXXXSNTLPFG*IGLAYTAPHEDTTTTRLTFAS*QAFNTL 379
NTLP G +GL TA HEDT TTRLTFAS QAFNTL
Sbjct: 142 SSSDQLSSVNTLPLGQLGLLNTAAHEDTMTTRLTFASLQAFNTL 11
Score = 118 bits (253), Expect(2) = 4e-041
Identities = 60/104 (57%), Positives = 68/104 (65%)
Frame = +3 / +1
Query: 381 MC*RLAMRQKLGELWWCLHVELCMLILFIRRVRCLMKTAGQMRITAXXXXXXXXFPKHCR 560
MC*RLA RQKL EL CLHV LC IL R + L+KTAGQ RI A FPK +
Sbjct: 13 MC*RLATRQKLSELS*CLHVLLCSTILTGPRAKYLLKTAGQTRICAERVRIGICFPKRAQ 192
Query: 561 NEKLLLLQQKQGWTL*LFVRH*YLDP*CSLQ*I*AAK*SLNISK 692
+ +LLL+Q+K GW L*LF H YL P*CS Q*+ A K S NISK
Sbjct: 193 SVRLLLMQRKLGWML*LFYHHWYLAP*CSQQ*MRAVKFSSNISK 324
Score = 105 bits (224), Expect(2) = 4e-058
Identities = 52/87 (59%), Positives = 57/87 (65%)
Frame = -3 / -1
Query: 958 LYRLEGPPQLLQFLRAVYRVDIIFHKIFGIRVRRIHGLQYVYHIRNFYCM*TADVSSRRF 779
LYR EGPP LL+FLR K+FGI V I GLQ VY IRNFY TADV SR
Sbjct: 593 LYRPEGPP*LLKFLRTHNFTFFHLRKVFGISVCWI*GLQNVYDIRNFYSYWTADVPSRCL 414
Query: 778 WLFVSQKKSISNITNIHHITEYIFNSL 698
W+F+ QKKSI NIT+IH I E IF SL
Sbjct: 413 WIFICQKKSIGNITDIH*IPESIFYSL 333
Score = 104 bits (221), Expect(2) = 2e-036
Identities = 54/105 (51%), Positives = 66/105 (62%)
Frame = +1 / +2
Query: 379 QCVKGLL*GKS*ASCGGVFMWSCVC*SYLSEG*GV**RLLVR*GLLQEEGGLVFSFQNTV 558
QCV+GL GKS*ASC VFM CV S L++G + *R LVR G +Q+ GLVF+FQN
Sbjct: 11 QCVEGLQRGKS*ASCHSVFMCCCVQQS*LAQGQSIY*RQLVRRGSVQKG*GLVFAFQNAR 190
Query: 559 GTRSSCFCSKNRAGRCNCLSVISIWTLDAAYSKFEQRNDP*IFQR 693
C CS+N G C+ ++I W LDAA S+ EQ N P I QR
Sbjct: 191 RA*GFCLCSENWDGCCSYSTIIGTWPLDAANSECEQ*NSPQISQR 325
Score = 100 bits (214), Expect(2) = 1e-038
Identities = 55/104 (52%), Positives = 63/104 (60%)
Frame = -2 / -3
Query: 692 L*NI*GSFRCSNLL*AASRVQILMTDKQLQRPALFLLQKQELLVPTVFWKLNTNPPSSCS 513
L*+I*G F CS+ L AASR Q+ M + LQ P+ F L KQ+ FWK NTNP C+
Sbjct: 324 L*DI*GEFYCSHSLLAASRGQVPMMVE*LQHPSQFSLHKQKPHALRAFWKANTNPHPFCT 145
Query: 512 NPHLTSSLHQTPYPSDK*D*HTQLHMKTPPQLA*LLPHSKPLTH 381
+P LTS L P *D TQ HMKT QLA*LLP KP TH
Sbjct: 144 DPRLTSCLQ*ILCPWAS*DC*TQQHMKTL*QLA*LLPRCKPSTH 13
Score = 79.9 bits (168), Expect(2) = 1e-038
Identities = 41/89 (46%), Positives = 43/89 (48%)
Frame = -1 / -2
Query: 957 SIGLKVHPSFCXXXXXXXXXXXXXTKFLG*G*DGYMVFSMFIISEIFIACELQMYRPDAS 778
S GLKVHPSF KFLG* GY VF MF+ SE FI LQMYRPDAS
Sbjct: 592 STGLKVHPSF*SFSELITLPSSTSVKFLG*VYVGYKVFRMFMTSETFIRTGLQMYRPDAS 413
Query: 777 GFXXXXXXXXXXXXXXXILLSTFSTVSRS 691
GF + FSTVS S
Sbjct: 412 GFSYARRRASATSRTSTRFQNLFSTVSCS 326
Score = 70.3 bits (147), Expect(2) = 4e-041
Identities = 42/86 (48%), Positives = 50/86 (58%)
Frame = +3 / +1
Query: 699 RLLKMYSVIWWIFVXXXXXXXXXTKSQKRLDDTSAVHMQ*KFLI**TY*RPCIRLTLIPK 878
RL K+ S I W+ V K Q+ LD TSAV +*KFL+ *T+*RP I+ TLIPK
Sbjct: 334 RL*KIDSGI*WMSVMLPMLFFWHMKIQRHLDGTSAVQYE*KFLMS*TF*RPYIQHTLIPK 513
Query: 879 ILWKMMSTLYTALRNCRSWGGPSSL* 956
L + LRN RS GGPS L*
Sbjct: 514 TLRRWKKVKL*VLRNFRS*GGPSGL* 591
Score = 69.3 bits (145), Expect(2) = 2e-036
Identities = 32/62 (51%), Positives = 43/62 (69%)
Frame = +1 / +2
Query: 772 KARSVWTIHLQFTCNKNF*YDKHTEDHVSVLPLSQKFCGR*CQLCIQL*ETAEAGVDLQA 951
K+R +WT+HLQ + NK+F* KH+ED +S + LSQK G + + *ET+EA VDLQA
Sbjct: 407 KSRGIWTVHLQSSTNKSF*CHKHSEDLISNIHLSQKLYGGGRR*SYEF*ETSEARVDLQA 586
Query: 952 YR 957
R
Sbjct: 587 CR 592
>gb|AV913390.1|AV913390 AV913390 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags21o04 5', mRNA sequence
Length = 518
Score = 315 bits (682), Expect = 3e-085
Identities = 134/169 (79%), Positives = 146/169 (86%)
Frame = +2 / +2
Query: 92 GGFVASELVKLLLSRGQYAVRGTVRDPGASKNAHLKVLEGAEERLQLLKADLMDYDSIAS 271
GGFVAS LVKLLLS+ Y VRGTVRDPG +KNAHLK LEGA ERLQLL ADL+DYDSIAS
Sbjct: 11 GGFVASWLVKLLLSKAHYTVRGTVRDPGNAKNAHLKALEGAGERLQLLSADLLDYDSIAS 190
Query: 272 AVAGCEGVFHVASPVLSHRPSNPEVEVIAPAVTGTTNVLKACYEAKVRRVVVVSSCGAVY 451
AVAGCEGVFHVASPV S R +NPE EVIAPAVTGT NVLKAC EAKV+RVV+VSSC AV+
Sbjct: 191 AVAGCEGVFHVASPVPSGRSTNPEEEVIAPAVTGTLNVLKACNEAKVKRVVIVSSCAAVF 370
Query: 452 ANPIYPKGKVFDEDCWSDEDYCRKKEDWYLVSKTLSEREALAFAAKTGL 598
NP +PKGKVF ED WSDED CRK EDWYL+SKT +EREA A+AAKTG+
Sbjct: 371 NNPNWPKGKVFTEDSWSDEDLCRKGEDWYLLSKTRAEREAFAYAAKTGM 517
Score = 241 bits (521), Expect = 5e-063
Identities = 114/169 (67%), Positives = 122/169 (72%)
Frame = -1 / -3
Query: 594 PVFAAKARASRSDSVLETKYXXXXXXXXXXXXXXXXSNTLPFG*IGLAYTAPHEDTTTTR 415
PVFAA A+ASRS VLE+KY NTLP G +GL TA HEDT TTR
Sbjct: 513 PVFAA*AKASRSARVLESKYQSSPFLHRSSSDQLSSVNTLPLGQLGLLNTAAHEDTMTTR 334
Query: 414 LTFAS*QAFNTLVVPVTAGAMTSTSGLEGRWERTGLATWKTPSQPATADAMLS*SIRSAL 235
LTFAS QAFNT VPVTAGA+TS+SGL E TGLATWKTPSQPATADAMLS*S RSAL
Sbjct: 333 LTFASLQAFNTFSVPVTAGAITSSSGLVDLPEGTGLATWKTPSQPATADAMLS*SSRSAL 154
Query: 234 RSCNLSSAPSSTLRWAFLLAPGSRTVPRTAYWPRERRSFTSSDATKPPA 88
SC+LS APSS LR AFL PGSRTVPRT W ERRS TS +ATKPP+
Sbjct: 153 SSCSLSPAPSSALR*AFLALPGSRTVPRTV*WALERRSLTSHEATKPPS 7
Score = 165 bits (355), Expect = 4e-040
Identities = 87/152 (57%), Positives = 99/152 (65%)
Frame = +3 / +3
Query: 144 TRSAAPCATLVLARMPISRCWKELRKGCSFSRLI*WTTTALHQQLPAVRVSSM*LALSFP 323
T SAAPCA V+ RM ISR K L KGCS S L WTTTAL ++L AVR SSM LALS
Sbjct: 63 TLSAAPCAIPVMLRMLISRR*KVLGKGCSCSALTCWTTTALRRRLLAVRASSMLLALSLL 242
Query: 324 IDPPTLRWRS*LPL*QVQPMC*RLAMRQKLGELWWCLHVELCMLILFIRRVRCLMKTAGQ 503
+D PTLR + * L*Q MC*RLA RQKL EL CLHV LC IL R + L+KTAGQ
Sbjct: 243 VDRPTLRKKL*PLL*QAH*MC*RLATRQKLSELS*CLHVLLCSTILTGPRAKYLLKTAGQ 422
Query: 504 MRITAXXXXXXXXFPKHCRNEKLLLLQQKQGW 599
RI A FPK ++ +LLL+Q+K GW
Sbjct: 423 TRICAERVRIGICFPKRAQSVRLLLMQRKLGW 518
Score = 158 bits (340), Expect = 5e-038
Identities = 79/139 (56%), Positives = 88/139 (63%)
Frame = -2 / -1
Query: 599 PALFLLQKQELLVPTVFWKLNTNPPSSCSNPHLTSSLHQTPYPSDK*D*HTQLHMKTPPQ 420
P+ F L KQ+ FWK NTNP C++P LTS L P *D TQ HMKT Q
Sbjct: 518 PSQFSLHKQKPHALRAFWKANTNPHPFCTDPRLTSCLQ*ILCPWAS*DC*TQQHMKTL*Q 339
Query: 419 LA*LLPHSKPLTHWLYLLQREL*PPPQGWRVDGKGQG*LHGRHPHSRQLLMQCCRSPSDQ 240
LA*LLP KP TH + LLQ+ L* PQGW + KGQG* HGR PHS+Q QCCRSP+ Q
Sbjct: 338 LA*LLPRCKPSTHSVCLLQQGL*LLPQGWSIYQKGQG*QHGRRPHSQQPPTQCCRSPAGQ 159
Query: 239 P*EAATFPQLLPAP*DGHS 183
* AA FPQ L AP*D HS
Sbjct: 158 R*AAAAFPQHLLAP*DEHS 102
Score = 137 bits (294), Expect = 1e-031
Identities = 64/106 (60%), Positives = 75/106 (70%)
Frame = -3 / -2
Query: 409 FCLIASL*HIGCTCYSGSYDLHLRVGGSMGKDRASYMEDTLTAGNC*CNAVVVHQISLEK 230
FCL+ASL HI C CYS Y+ LRVG S +DRAS MED LTA N NAVVV Q+S E+
Sbjct: 328 FCLVASLQHIQCACYSRGYNFFLRVGRSTRRDRASNMEDALTASNRRRNAVVVQQVSAEQ 149
Query: 229 LQPFLSSFQHLEMGILASTRVAHGAADRVLAPGEEELHQLRRDEAA 92
LQPF S+F LEM IL+ T +AHGAAD V+ GEEEL + DEA+
Sbjct: 148 LQPFPSTF*RLEMSILSITGIAHGAADSVVGLGEEELDEP*GDEAS 11
Score = 90.9 bits (192), Expect(3) = 2e-030
Identities = 45/86 (52%), Positives = 56/86 (65%)
Frame = +1 / +1
Query: 334 QP*GGGHSSRCNRYNQCVKGLL*GKS*ASCGGVFMWSCVC*SYLSEG*GV**RLLVR*GL 513
QP*G +S CNR+ +CV+GL GKS*ASC VFM CV S L++G + *R LVR G
Sbjct: 253 QP*GRSYSPCCNRHTECVEGLQRGKS*ASCHSVFMCCCVQQS*LAQGQSIY*RQLVRRGS 432
Query: 514 LQEEGGLVFSFQNTVGTRSSCFCSKN 591
+Q+ GLVF+FQN C CS+N
Sbjct: 433 VQKG*GLVFAFQNARRA*GFCLCSEN 510
Score = 44.6 bits (91), Expect(3) = 2e-030
Identities = 19/29 (65%), Positives = 21/29 (72%)
Frame = +1 / +1
Query: 184 ECPSQGAGRS*GKVAASQG*SDGLRQHCI 270
EC SQGA R GK AA+Q * GLRQHC+
Sbjct: 103 ECSSQGARRCWGKAAAAQR*PAGLRQHCV 189
Score = 35.4 bits (71), Expect(3) = 2e-030
Identities = 13/19 (68%), Positives = 15/19 (78%)
Frame = +1 / +1
Query: 112 AGEAPPLPGPIRGPRHRAR 168
A +APPL GP+ PRHRAR
Sbjct: 31 ARQAPPLQGPLHCPRHRAR 87
>gb|CA032017.1|CA032017 HX11M09r HX Hordeum vulgare subsp. vulgare cDNA clone HX11M09
5-PRIME, mRNA sequence
Length = 647
Score = 313 bits (678), Expect = 1e-084
Identities = 135/183 (73%), Positives = 148/183 (80%)
Frame = +2 / +2
Query: 17 QREQRRVFKPKTMDPVRKSVCVTGAGGFVASELVKLLLSRGQYAVRGTVRDPGASKNAHL 196
Q RR RK+VCVTGAGGF+AS LVKLLLS+G Y VRGTVRDPG +KNAHL
Sbjct: 98 QERGRRKSMAAAAAAARKTVCVTGAGGFIASWLVKLLLSKGHYTVRGTVRDPGNAKNAHL 277
Query: 197 KVLEGAEERLQLLKADLMDYDSIASAVAGCEGVFHVASPVLSHRPSNPEVEVIAPAVTGT 376
K LEGA ERLQLL ADL++YDSIASAVAGC+GVFHVASPV S R +NPE EVIAPAVTGT
Sbjct: 278 KALEGAGERLQLLSADLLNYDSIASAVAGCDGVFHVASPVPSGRSTNPEEEVIAPAVTGT 457
Query: 377 TNVLKACYEAKVRRVVVVSSCGAVYANPIYPKGKVFDEDCWSDEDYCRKKEDWYLVSKTL 556
NVLKACYEAKV+RVV+VSS AV NP +PKGK FDED WSDED CRK EDWY +SKTL
Sbjct: 458 LNVLKACYEAKVKRVVMVSSVAAVSNNPNWPKGKFFDEDSWSDEDLCRKGEDWYFLSKTL 637
Query: 557 SER 565
+ER
Sbjct: 638 AER 646
Score = 229 bits (494), Expect = 3e-059
Identities = 111/166 (66%), Positives = 116/166 (69%)
Frame = -1 / -3
Query: 564 RSDSVLETKYXXXXXXXXXXXXXXXXSNTLPFG*IGLAYTAPHEDTTTTRLTFAS*QAFN 385
RS SVLE KY S LP G +GL TA EDT TTRLTFAS*QAF
Sbjct: 645 RSASVLERKYQSSPFLQRSSSDQLSSSKNLPLGQLGLLDTAATEDTMTTRLTFAS*QAFK 466
Query: 384 TLVVPVTAGAMTSTSGLEGRWERTGLATWKTPSQPATADAMLS*SIRSALRSCNLSSAPS 205
T VPVTAGA+TS+SGL E TGLATWKTPSQPATADAMLS* RSAL SCNLS APS
Sbjct: 465 TFSVPVTAGAITSSSGLVDLPEGTGLATWKTPSQPATADAMLS*FSRSALSSCNLSPAPS 286
Query: 204 STLRWAFLLAPGSRTVPRTAYWPRERRSFTSSDATKPPAPVTHTLF 67
S LR AFL PGSRTVPRT P ERRS TS +A KPPAPVTHT+F
Sbjct: 285 SALR*AFLALPGSRTVPRTV*CPLERRSLTSHEAMKPPAPVTHTVF 148
Score = 144 bits (310), Expect = 7e-034
Identities = 69/127 (54%), Positives = 85/127 (66%)
Frame = -3 / -2
Query: 409 FCLIASL*HIGCTCYSGSYDLHLRVGGSMGKDRASYMEDTLTAGNC*CNAVVVHQISLEK 230
F L+AS I C CYS Y+ LR+G S +DRAS MED +TA N * NAVVV Q+ E+
Sbjct: 490 FRLVASFQDIQCACYSRGYNFFLRIG*SARRDRASNMEDPITASNR*RNAVVVQQVGAEQ 311
Query: 229 LQPFLSSFQHLEMGILASTRVAHGAADRVLAPGEEELHQLRRDEAASAGHAHALPHRIHC 50
LQPF S+F L+M IL+ T ++HGAADRV++ GEEEL + R DEA+ A HAH LP R
Sbjct: 310 LQPFPSTF*CLKMSILSITGISHGAADRVVSLGEEELDEPRGDEASCASHAHGLPRRRRR 131
Query: 49 FRFEYSS 29
R SS
Sbjct: 130 RRHALSS 110
Score = 132 bits (283), Expect = 4e-030
Identities = 67/123 (54%), Positives = 76/123 (61%)
Frame = -2 / -1
Query: 551 FWKLNTNPPSSCSNPHLTSSLHQTPYPSDK*D*HTQLHMKTPPQLA*LLPHSKPLTHWLY 372
FWK NTNP C +P LTS LH+ P *D TQ +K P QLA*L P SK H +
Sbjct: 632 FWKGNTNPHPFCRDPRLTSCLHRRICP*AS*DYWTQQQLKIP*QLA*LSPRSKLSRHSVC 453
Query: 371 LLQREL*PPPQGWRVDGKGQG*LHGRHPHSRQLLMQCCRSPSDQP*EAATFPQLLPAP*D 192
LLQ+ L* PQ W + KGQG* HGR HS+Q L QCCRS + + * ATFPQ L P*D
Sbjct: 452 LLQQGL*LLPQDWLICQKGQG*QHGRPHHSQQPLTQCCRSSAGRR*AVATFPQHLLVP*D 273
Query: 191 GHS 183
HS
Sbjct: 272 EHS 264
Score = 116 bits (249), Expect(2) = 7e-031
Identities = 70/140 (50%), Positives = 81/140 (57%)
Frame = +3 / +3
Query: 144 TRSAAPCATLVLARMPISRCWKELRKGCSFSRLI*WTTTALHQQLPAVRVSSM*LALSFP 323
TRSAAPC V+ RM I R K L KGC+ S TTTAL Q+L AV SSM LALS
Sbjct: 225 TRSAAPCEIPVMLRMLILRH*KVLGKGCNCSAPTC*TTTALRQRLLAVMGSSMLLALSLL 404
Query: 324 IDPPTLRWRS*LPL*QVQPMC*RLAMRQKLGELWWCLHVELCMLILFIRRVRCLMKTAGQ 503
D P LR + * L*Q M *+LA R+KL EL W L + LC +IL R MKTAGQ
Sbjct: 405 ADQPILRKKL*PLL*QAH*MS*KLATRRKLSELSWYLQLLLCPIILTGLRANSSMKTAGQ 584
Query: 504 MRITAXXXXXXXXFPKHCRN 563
RI+A FPK ++
Sbjct: 585 TRISAERVRIGISFPKRSQS 644
Score = 37.7 bits (76), Expect(2) = 7e-031
Identities = 16/38 (42%), Positives = 20/38 (52%)
Frame = +1 / +1
Query: 55 GSGAEEXXXXXXXXXXXVGAGEAPPLPGPIRGPRHRAR 168
G G E+ + A +APPL G + GPRHRAR
Sbjct: 136 GGGEEDRVRDWRRRLHRLVARQAPPLQGTLHGPRHRAR 249
>gb|AV913397.1|AV913397 AV913397 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags21o15 5', mRNA sequence
Length = 521
Score = 312 bits (675), Expect = 3e-084
Identities = 132/170 (77%), Positives = 144/170 (84%)
Frame = +2 / +1
Query: 92 GGFVASELVKLLLSRGQYAVRGTVRDPGASKNAHLKVLEGAEERLQLLKADLMDYDSIAS 271
GGFVAS LVKLLLS+ Y VRGTVRDPG +KNAHLK LEGA ERLQLL ADL+DYDSIAS
Sbjct: 10 GGFVASWLVKLLLSKAHYTVRGTVRDPGNAKNAHLKALEGAGERLQLLSADLLDYDSIAS 189
Query: 272 AVAGCEGVFHVASPVLSHRPSNPEVEVIAPAVTGTTNVLKACYEAKVRRVVVVSSCGAVY 451
AVAGCEGVFHVASPV S R +NPE EVIAPAVTGT NVLKAC EAKV+RV +V SC AV+
Sbjct: 190 AVAGCEGVFHVASPVPSGRSTNPEEEVIAPAVTGTLNVLKACNEAKVKRVXIVXSCAAVF 369
Query: 452 ANPIYPKGKVFDEDCWSDEDYCRKKEDWYLVSKTLSEREALAFAAKTGLD 601
NP +PKGKVF ED W DED CRK EDWYL+SKT +EREA A+AAKTG+D
Sbjct: 370 NNPNWPKGKVFTEDSWXDEDLCRKGEDWYLLSKTRAEREAFAYAAKTGMD 519
Score = 239 bits (516), Expect = 3e-062
Identities = 115/172 (66%), Positives = 123/172 (71%)
Frame = -1 / -1
Query: 603 TSSPVFAAKARASRSDSVLETKYXXXXXXXXXXXXXXXXSNTLPFG*IGLAYTAPHEDTT 424
TS PVFAA A+ASRS VLE+KY NTLP G +GL TA HE T
Sbjct: 521 TSIPVFAA*AKASRSARVLESKYQSSPFLHRSSSXQLSSVNTLPLGQLGLLNTAAHEXTM 342
Query: 423 TTRLTFAS*QAFNTLVVPVTAGAMTSTSGLEGRWERTGLATWKTPSQPATADAMLS*SIR 244
TRLTFAS QAFNT VPVTAGA+TS+SGL E TGLATWKTPSQPATADAMLS*S R
Sbjct: 341 XTRLTFASLQAFNTFSVPVTAGAITSSSGLVDLPEGTGLATWKTPSQPATADAMLS*SSR 162
Query: 243 SALRSCNLSSAPSSTLRWAFLLAPGSRTVPRTAYWPRERRSFTSSDATKPPA 88
SAL SC+LS APSS LR AFL PGSRTVPRT W ERRS TS +ATKPP+
Sbjct: 161 SALSSCSLSPAPSSALR*AFLALPGSRTVPRTV*WALERRSLTSHEATKPPS 6
Score = 160 bits (345), Expect = 1e-038
Identities = 86/152 (56%), Positives = 98/152 (64%)
Frame = +3 / +2
Query: 144 TRSAAPCATLVLARMPISRCWKELRKGCSFSRLI*WTTTALHQQLPAVRVSSM*LALSFP 323
T SAAPCA V+ RM ISR K L KGCS S L WTTTAL ++L AVR SSM LALS
Sbjct: 62 TLSAAPCAIPVMLRMLISRR*KVLGKGCSCSALTCWTTTALRRRLLAVRASSMLLALSLL 241
Query: 324 IDPPTLRWRS*LPL*QVQPMC*RLAMRQKLGELWWCLHVELCMLILFIRRVRCLMKTAGQ 503
+D PTLR + * L*Q MC*RLA RQKL EL LHV LC IL R + L+KTAGQ
Sbjct: 242 VDRPTLRKKL*PLL*QAH*MC*RLATRQKLSELX*XLHVLLCSTILTGPRAKYLLKTAGQ 421
Query: 504 MRITAXXXXXXXXFPKHCRNEKLLLLQQKQGW 599
RI A FPK ++ +LLL+Q+K GW
Sbjct: 422 TRICAERVRIGICFPKRAQSVRLLLMQRKLGW 517
Score = 155 bits (332), Expect = 6e-037
Identities = 77/139 (55%), Positives = 86/139 (61%)
Frame = -2 / -2
Query: 599 PALFLLQKQELLVPTVFWKLNTNPPSSCSNPHLTSSLHQTPYPSDK*D*HTQLHMKTPPQ 420
P+ F L KQ+ FWK NTNP C++P L S L P *D TQ HMK Q
Sbjct: 517 PSQFSLHKQKPHALRAFWKANTNPHPFCTDPRLXSCLQ*ILCPWAS*DC*TQQHMKXLXQ 338
Query: 419 LA*LLPHSKPLTHWLYLLQREL*PPPQGWRVDGKGQG*LHGRHPHSRQLLMQCCRSPSDQ 240
LA*LLP KP TH + LLQ+ L* PQGW + KGQG* HGR PHS+Q QCCRSP+ Q
Sbjct: 337 LA*LLPRCKPSTHSVCLLQQGL*LLPQGWSIYQKGQG*QHGRRPHSQQPPTQCCRSPAGQ 158
Query: 239 P*EAATFPQLLPAP*DGHS 183
* AA FPQ L AP*D HS
Sbjct: 157 R*AAAAFPQHLLAP*DEHS 101
Score = 137 bits (294), Expect = 1e-031
Identities = 64/106 (60%), Positives = 75/106 (70%)
Frame = -3 / -3
Query: 409 FCLIASL*HIGCTCYSGSYDLHLRVGGSMGKDRASYMEDTLTAGNC*CNAVVVHQISLEK 230
FCL+ASL HI C CYS Y+ LRVG S +DRAS MED LTA N NAVVV Q+S E+
Sbjct: 327 FCLVASLQHIQCACYSRGYNFFLRVGRSTRRDRASNMEDALTASNRRRNAVVVQQVSAEQ 148
Query: 229 LQPFLSSFQHLEMGILASTRVAHGAADRVLAPGEEELHQLRRDEAA 92
LQPF S+F LEM IL+ T +AHGAAD V+ GEEEL + DEA+
Sbjct: 147 LQPFPSTF*RLEMSILSITGIAHGAADSVVGLGEEELDEP*GDEAS 10
Score = 81.7 bits (172), Expect(3) = 1e-027
Identities = 43/89 (48%), Positives = 54/89 (60%)
Frame = +1 / +3
Query: 334 QP*GGGHSSRCNRYNQCVKGLL*GKS*ASCGGVFMWSCVC*SYLSEG*GV**RLLVR*GL 513
QP*G +S CNR+ +CV+GL GKS*AS FM CV S L++G + *R L R G
Sbjct: 252 QP*GRSYSPCCNRHTECVEGLQRGKS*ASXHSXFMCCCVQQS*LAQGQSIY*RQLXRRGS 431
Query: 514 LQEEGGLVFSFQNTVGTRSSCFCSKNRAG 600
+Q+ GLVF+FQN C CS+N G
Sbjct: 432 VQKG*GLVFAFQNARRA*GFCLCSENWDG 518
Score = 44.6 bits (91), Expect(3) = 1e-027
Identities = 19/29 (65%), Positives = 21/29 (72%)
Frame = +1 / +3
Query: 184 ECPSQGAGRS*GKVAASQG*SDGLRQHCI 270
EC SQGA R GK AA+Q * GLRQHC+
Sbjct: 102 ECSSQGARRCWGKAAAAQR*PAGLRQHCV 188
Score = 35.4 bits (71), Expect(3) = 1e-027
Identities = 13/19 (68%), Positives = 15/19 (78%)
Frame = +1 / +3
Query: 112 AGEAPPLPGPIRGPRHRAR 168
A +APPL GP+ PRHRAR
Sbjct: 30 ARQAPPLQGPLHCPRHRAR 86
>gb|CA007645.1|CA007645 HU08J12r HU Hordeum vulgare subsp. vulgare cDNA clone HU08J12
5-PRIME, mRNA sequence
Length = 511
Score = 312 bits (675), Expect = 3e-084
Identities = 133/167 (79%), Positives = 143/167 (85%)
Frame = +2 / +1
Query: 65 RKSVCVTGAGGFVASELVKLLLSRGQYAVRGTVRDPGASKNAHLKVLEGAEERLQLLKAD 244
R VCVTGAGGFVAS LVKLLLS+ Y VRGTVRDPG +KNAHLK LEGA ERLQLL AD
Sbjct: 10 RSVVCVTGAGGFVASWLVKLLLSKAHYTVRGTVRDPGNAKNAHLKALEGAGERLQLLSAD 189
Query: 245 LMDYDSIASAVAGCEGVFHVASPVLSHRPSNPEVEVIAPAVTGTTNVLKACYEAKVRRVV 424
L+DYDSIASAVAGCEGVFHVASPV S R +NPE EVIAPAVTGT NVLKAC EAKV+RVV
Sbjct: 190 LLDYDSIASAVAGCEGVFHVASPVPSGRSTNPEEEVIAPAVTGTLNVLKACNEAKVKRVV 369
Query: 425 VVSSCGAVYANPIYPKGKVFDEDCWSDEDYCRKKEDWYLVSKTLSER 565
+VSSC AV+ NP +PKGKVF ED WSDED CRK EDWYL+SKT +ER
Sbjct: 370 IVSSCAAVFNNPNWPKGKVFTEDSWSDEDLCRKGEDWYLLSKTRAER 510
Score = 240 bits (518), Expect = 1e-062
Identities = 112/164 (68%), Positives = 118/164 (71%)
Frame = -1 / -3
Query: 564 RSDSVLETKYXXXXXXXXXXXXXXXXSNTLPFG*IGLAYTAPHEDTTTTRLTFAS*QAFN 385
RS VLE+KY NTLP G +GL TA HEDT TTRLTFAS QAFN
Sbjct: 509 RSARVLESKYQSSPFLHRSSSDQLSSVNTLPLGQLGLLNTAAHEDTMTTRLTFASLQAFN 330
Query: 384 TLVVPVTAGAMTSTSGLEGRWERTGLATWKTPSQPATADAMLS*SIRSALRSCNLSSAPS 205
T VPVTAGA+TS+SGL E TGLATWKTPSQPATADAMLS*S RSAL SC+LS APS
Sbjct: 329 TFSVPVTAGAITSSSGLVDLPEGTGLATWKTPSQPATADAMLS*SSRSALSSCSLSPAPS 150
Query: 204 STLRWAFLLAPGSRTVPRTAYWPRERRSFTSSDATKPPAPVTHT 73
S LR AFL PGSRTVPRT W ERRS TS +ATKPPAPVTHT
Sbjct: 149 SALR*AFLALPGSRTVPRTV*WALERRSLTSHEATKPPAPVTHT 18
Score = 153 bits (329), Expect = 2e-036
Identities = 71/117 (60%), Positives = 82/117 (70%)
Frame = -3 / -2
Query: 409 FCLIASL*HIGCTCYSGSYDLHLRVGGSMGKDRASYMEDTLTAGNC*CNAVVVHQISLEK 230
FCL+ASL HI C CYS Y+ LRVG S +DRAS MED LTA N NAVVV Q+S E+
Sbjct: 354 FCLVASLQHIQCACYSRGYNFFLRVGRSTRRDRASNMEDALTASNRRRNAVVVQQVSAEQ 175
Query: 229 LQPFLSSFQHLEMGILASTRVAHGAADRVLAPGEEELHQLRRDEAASAGHAHALPHR 59
LQPF S+F LEM IL+ T +AHGAAD V+ GEEEL + DEA+ AGHAH P R
Sbjct: 174 LQPFPSTF*RLEMSILSITGIAHGAADSVVGLGEEELDEP*GDEASCAGHAHNAPLR 4
Score = 151 bits (325), Expect = 6e-036
Identities = 74/123 (60%), Positives = 81/123 (65%)
Frame = -2 / -1
Query: 551 FWKLNTNPPSSCSNPHLTSSLHQTPYPSDK*D*HTQLHMKTPPQLA*LLPHSKPLTHWLY 372
FWK NTNP C++P LTS L P *D TQ HMKT QLA*LLP KP TH +
Sbjct: 496 FWKANTNPHPFCTDPRLTSCLQ*ILCPWAS*DC*TQQHMKTL*QLA*LLPRCKPSTHSVC 317
Query: 371 LLQREL*PPPQGWRVDGKGQG*LHGRHPHSRQLLMQCCRSPSDQP*EAATFPQLLPAP*D 192
LLQ+ L* PQGW + KGQG* HGR PHS+Q QCCRSP+ Q * AA FPQ L AP*D
Sbjct: 316 LLQQGL*LLPQGWSIYQKGQG*QHGRRPHSQQPPTQCCRSPAGQR*AAAAFPQHLLAP*D 137
Query: 191 GHS 183
HS
Sbjct: 136 EHS 128
Score = 147 bits (315), Expect = 1e-034
Identities = 80/140 (57%), Positives = 89/140 (63%)
Frame = +3 / +2
Query: 144 TRSAAPCATLVLARMPISRCWKELRKGCSFSRLI*WTTTALHQQLPAVRVSSM*LALSFP 323
T SAAPCA V+ RM ISR K L KGCS S L WTTTAL ++L AVR SSM LALS
Sbjct: 89 TLSAAPCAIPVMLRMLISRR*KVLGKGCSCSALTCWTTTALRRRLLAVRASSMLLALSLL 268
Query: 324 IDPPTLRWRS*LPL*QVQPMC*RLAMRQKLGELWWCLHVELCMLILFIRRVRCLMKTAGQ 503
+D PTLR + * L*Q MC*RLA RQKL EL CLHV LC IL R + L+KTAGQ
Sbjct: 269 VDRPTLRKKL*PLL*QAH*MC*RLATRQKLSELS*CLHVLLCSTILTGPRAKYLLKTAGQ 448
Query: 504 MRITAXXXXXXXXFPKHCRN 563
RI A FPK ++
Sbjct: 449 TRICAERVRIGICFPKRAQS 508
Score = 82.6 bits (174), Expect(3) = 6e-028
Identities = 41/73 (56%), Positives = 51/73 (69%)
Frame = +1 / +3
Query: 334 QP*GGGHSSRCNRYNQCVKGLL*GKS*ASCGGVFMWSCVC*SYLSEG*GV**RLLVR*GL 513
QP*G +S CNR+ +CV+GL GKS*ASC VFM CV S L++G + *R LVR G
Sbjct: 279 QP*GRSYSPCCNRHTECVEGLQRGKS*ASCHSVFMCCCVQQS*LAQGQSIY*RQLVRRGS 458
Query: 514 LQEEGGLVFSFQN 552
+Q+ GLVF+FQN
Sbjct: 459 VQKG*GLVFAFQN 497
Score = 44.6 bits (91), Expect(3) = 6e-028
Identities = 19/29 (65%), Positives = 21/29 (72%)
Frame = +1 / +3
Query: 184 ECPSQGAGRS*GKVAASQG*SDGLRQHCI 270
EC SQGA R GK AA+Q * GLRQHC+
Sbjct: 129 ECSSQGARRCWGKAAAAQR*PAGLRQHCV 215
Score = 35.4 bits (71), Expect(3) = 6e-028
Identities = 13/19 (68%), Positives = 15/19 (78%)
Frame = +1 / +3
Query: 112 AGEAPPLPGPIRGPRHRAR 168
A +APPL GP+ PRHRAR
Sbjct: 57 ARQAPPLQGPLHCPRHRAR 113
>gb|BJ466618.1|BJ466618 BJ466618 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags33a09 3', mRNA sequence
Length = 681
Score = 188 bits (404), Expect(2) = 2e-083
Identities = 79/109 (72%), Positives = 91/109 (83%)
Frame = +2 / -1
Query: 698 ETVENVLSNMVDIRDVADALLLTYEKPEASGRYICSSHAIKISDMINILKTMYPSYPYPK 877
ETVEN N+VD+RDVADALLL YE PEASGRYICS IK+SD+INILKT+YP+Y YPK
Sbjct: 447 ETVENRFWNLVDVRDVADALLLAYENPEASGRYICSPVRIKVSDVINILKTLYPTYTYPK 268
Query: 878 NFVEDDVNSVYSSEKLQKLGWTFKPIEESLRDTVESYKAFGILN*TSN* 1024
NF E + V SSEKLQKLGWTF+P+E++L D+VESYKA GILN* SN*
Sbjct: 267 NFTEVEEGKVMSSEKLQKLGWTFRPVEKTLGDSVESYKASGILN*ASN* 121
Score = 146 bits (314), Expect(2) = 7e-056
Identities = 67/109 (61%), Positives = 77/109 (70%)
Frame = -3 / +1
Query: 1024 LVGCSIQDAKCLVGFNSVTEGFLYRLEGPPQLLQFLRAVYRVDIIFHKIFGIRVRRIHGL 845
LVGCS+QDA+C VGF++V+EG LYR EGPP LL+FLR K+FGI V I GL
Sbjct: 121 LVGCSVQDARCFVGFDTVSEGLLYRPEGPP*LLKFLRTHNFTFFHLRKVFGISVCWI*GL 300
Query: 844 QYVYHIRNFYCM*TADVSSRRFWLFVSQKKSISNITNIHHITEYIFNSL 698
Q VY IRNFY TADV SR W+F+ QKKSI NIT+IH I E IF SL
Sbjct: 301 QNVYDIRNFYSYWTADVPSRCLWIFICQKKSIGNITDIH*IPESIFYSL 447
Score = 142 bits (305), Expect(2) = 2e-083
Identities = 56/75 (74%), Positives = 64/75 (85%)
Frame = +2 / -1
Query: 467 PKGKVFDEDCWSDEDYCRKKEDWYLVSKTLSEREALAFAAKTGLDVVTVCPSLVFGPLMQ 646
PKGKVF ED WSDED CRK EDWYL+SKT +EREA A+AAKTG+DVV + PSLV GPLMQ
Sbjct: 681 PKGKVFTEDSWSDEDLCRKGEDWYLLSKTRAEREAFAYAAKTGMDVVAILPSLVLGPLMQ 502
Query: 647 PTVNLSSEMILKYFK 691
PTVN SS+++LKY K
Sbjct: 501 PTVNASSKILLKYLK 457
Score = 112 bits (240), Expect(2) = 9e-043
Identities = 60/114 (52%), Positives = 71/114 (62%)
Frame = +3 / -2
Query: 699 RLLKMYSVIWWIFVXXXXXXXXXTKSQKRLDDTSAVHMQ*KFLI**TY*RPCIRLTLIPK 878
RL K+ S I W+ V K Q+ LD TSAV +*KFL+ *T+*RP I+ TLIPK
Sbjct: 446 RL*KIDSGI*WMSVMLPMLFFWHMKIQRHLDGTSAVQYE*KFLMS*TF*RPYIQHTLIPK 267
Query: 879 ILWKMMSTLYTALRNCRSWGGPSSL*RNPSVTLLNPTRHLAS*IEHPTRTVSIC 1040
L + LRN RS GGPS L*R PS T+ NPT+HLAS* EHPTR + C
Sbjct: 266 TLRRWKKVKL*VLRNFRS*GGPSGL*RRPSETVSNPTKHLAS*TEHPTRENNAC 105
Score = 110 bits (235), Expect(2) = 8e-039
Identities = 57/111 (51%), Positives = 61/111 (54%)
Frame = -1 / +2
Query: 1023 *LDVQFRMPNAL*DSTVSRRDSSIGLKVHPSFCXXXXXXXXXXXXXTKFLG*G*DGYMVF 844
*LD QFRMP+AL*DST+S R S GLKVHPSF KFLG* GY VF
Sbjct: 122 *LDAQFRMPDAL*DSTLSPRVFSTGLKVHPSF*SFSELITLPSSTSVKFLG*VYVGYKVF 301
Query: 843 SMFIISEIFIACELQMYRPDASGFXXXXXXXXXXXXXXXILLSTFSTVSRS 691
MF+ SE FI LQMYRPDASGF + FSTVS S
Sbjct: 302 RMFMTSETFIRTGLQMYRPDASGFSYARRRASATSRTSTRFQNLFSTVSCS 454
Score = 102 bits (218), Expect(2) = 6e-036
Identities = 47/85 (55%), Positives = 59/85 (69%)
Frame = +1 / -3
Query: 772 KARSVWTIHLQFTCNKNF*YDKHTEDHVSVLPLSQKFCGR*CQLCIQL*ETAEAGVDLQA 951
K+R +WT+HLQ + NK+F* KH+ED +S + LSQK G + + *ET+EA VDLQA
Sbjct: 373 KSRGIWTVHLQSSTNKSF*CHKHSEDLISNIHLSQKLYGGGRR*SYEF*ETSEARVDLQA 194
Query: 952 YRGIPP*HC*ILQGIWHPELNIQLG 1026
R P C ILQ IWHPEL+IQLG
Sbjct: 193 CREDPRRQCRILQSIWHPELSIQLG 119
Score = 91.8 bits (194), Expect(2) = 7e-056
Identities = 42/73 (57%), Positives = 47/73 (64%)
Frame = -1 / +2
Query: 690 LKYLRIISLLKFTVGCIKGPNTNDGQTVTTSSPVFAAKARASRSDSVLETKYXXXXXXXX 511
L+YLR I LL FTVGCIKGP+TNDG+ TTS PVFAA A+ASRS VLE+KY
Sbjct: 458 LRYLRRILLLAFTVGCIKGPSTNDGRIATTSIPVFAA*AKASRSARVLESKYQSSPFLHR 637
Query: 510 XXXXXXXXSNTLP 472
NTLP
Sbjct: 638 SSSDQLSSVNTLP 676
Score = 81.7 bits (172), Expect(2) = 9e-043
Identities = 40/74 (54%), Positives = 48/74 (64%)
Frame = +3 / -2
Query: 471 RVRCLMKTAGQMRITAXXXXXXXXFPKHCRNEKLLLLQQKQGWTL*LFVRH*YLDP*CSL 650
R + L+KTAGQ RI A FPK ++ +LLL+Q+K GW L*LF H YL P*CS
Sbjct: 677 RAKYLLKTAGQTRICAERVRIGICFPKRAQSVRLLLMQRKLGWML*LFYHHWYLAP*CSQ 498
Query: 651 Q*I*AAK*SLNISK 692
Q*+ A K S NISK
Sbjct: 497 Q*MRAVKFSSNISK 456
Score = 70.7 bits (148), Expect(2) = 8e-039
Identities = 35/68 (51%), Positives = 43/68 (63%)
Frame = -2 / +3
Query: 692 L*NI*GSFRCSNLL*AASRVQILMTDKQLQRPALFLLQKQELLVPTVFWKLNTNPPSSCS 513
L*+I*G F CS+ L AASR Q+ M + LQ P+ F L KQ+ FWK NTNP C+
Sbjct: 456 L*DI*GEFYCSHSLLAASRGQVPMMVE*LQHPSQFSLHKQKPHALRAFWKANTNPHPFCT 635
Query: 512 NPHLTSSL 489
+P LTS L
Sbjct: 636 DPRLTSCL 659
Score = 68.9 bits (144), Expect(2) = 6e-036
Identities = 35/75 (46%), Positives = 45/75 (60%)
Frame = +1 / -3
Query: 469 EG*GV**RLLVR*GLLQEEGGLVFSFQNTVGTRSSCFCSKNRAGRCNCLSVISIWTLDAA 648
+G + *R LVR G +Q+ GLVF+FQN C CS+N G C+ ++I W LDAA
Sbjct: 679 QGQSIY*RQLVRRGSVQKG*GLVFAFQNARRA*GFCLCSENWDGCCSYSTIIGTWPLDAA 500
Query: 649 YSKFEQRNDP*IFQR 693
S+ EQ N P I QR
Sbjct: 499 NSECEQ*NSPQISQR 455
Score = 64.3 bits (134), Expect(3) = 4e-029
Identities = 27/49 (55%), Positives = 35/49 (71%)
Frame = -3 / +1
Query: 691 FEIFKDHFAAQIYCRLHQGSKY**RTNSYNVQPCFCCKSKSFSFRQCFG 545
FEIF+++F A+I+C LHQG+KY * NSYN+ P F C SKS + FG
Sbjct: 457 FEIFEENFTARIHCWLHQGAKYQ*W*NSYNIHPSFRCISKSLTLCARFG 603
Score = 56.5 bits (117), Expect(3) = 4e-029
Identities = 25/38 (65%), Positives = 28/38 (73%)
Frame = -2 / +3
Query: 1025 PSWMFNSGCQMPCRIQQCHGGIPL*A*RSTPASAVSQS 912
PSWM +SGCQM CRI+ C G L A*RST AS VSQ+
Sbjct: 120 PSWMLSSGCQMLCRIRHCLRGSSLQA*RSTLASEVSQN 233
Score = 46.0 bits (94), Expect(3) = 4e-029
Identities = 20/39 (51%), Positives = 24/39 (61%)
Frame = -2 / +3
Query: 887 PQNFWDKGKTDTWSSVCLSYQKFLLHVNCRCIVQTLLAF 771
P +FWDK D SS CL +QK L ++CRC VQ L F
Sbjct: 258 P*SFWDKCMLDIRSSECL*HQKLLFVLDCRCTVQMPLDF 374
>gb|BJ466412.1|BJ466412 BJ466412 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags32a03 3', mRNA sequence
Length = 663
Score = 188 bits (404), Expect(2) = 2e-083
Identities = 79/109 (72%), Positives = 91/109 (83%)
Frame = +2 / -1
Query: 698 ETVENVLSNMVDIRDVADALLLTYEKPEASGRYICSSHAIKISDMINILKTMYPSYPYPK 877
ETVEN N+VD+RDVADALLL YE PEASGRYICS IK+SD+INILKT+YP+Y YPK
Sbjct: 429 ETVENRFWNLVDVRDVADALLLAYENPEASGRYICSPVRIKVSDVINILKTLYPTYTYPK 250
Query: 878 NFVEDDVNSVYSSEKLQKLGWTFKPIEESLRDTVESYKAFGILN*TSN* 1024
NF E + V SSEKLQKLGWTF+P+E++L D+VESYKA GILN* SN*
Sbjct: 249 NFTEVEEGKVMSSEKLQKLGWTFRPVEKTLGDSVESYKASGILN*ASN* 103
Score = 146 bits (314), Expect(2) = 7e-056
Identities = 67/109 (61%), Positives = 77/109 (70%)
Frame = -3 / +1
Query: 1024 LVGCSIQDAKCLVGFNSVTEGFLYRLEGPPQLLQFLRAVYRVDIIFHKIFGIRVRRIHGL 845
LVGCS+QDA+C VGF++V+EG LYR EGPP LL+FLR K+FGI V I GL
Sbjct: 103 LVGCSVQDARCFVGFDTVSEGLLYRPEGPP*LLKFLRTHNFTFFHLRKVFGISVCWI*GL 282
Query: 844 QYVYHIRNFYCM*TADVSSRRFWLFVSQKKSISNITNIHHITEYIFNSL 698
Q VY IRNFY TADV SR W+F+ QKKSI NIT+IH I E IF SL
Sbjct: 283 QNVYDIRNFYSYWTADVPSRCLWIFICQKKSIGNITDIH*IPESIFYSL 429
Score = 142 bits (305), Expect(2) = 2e-083
Identities = 56/75 (74%), Positives = 64/75 (85%)
Frame = +2 / -1
Query: 467 PKGKVFDEDCWSDEDYCRKKEDWYLVSKTLSEREALAFAAKTGLDVVTVCPSLVFGPLMQ 646
PKGKVF ED WSDED CRK EDWYL+SKT +EREA A+AAKTG+DVV + PSLV GPLMQ
Sbjct: 663 PKGKVFTEDSWSDEDLCRKGEDWYLLSKTRAEREAFAYAAKTGMDVVAILPSLVLGPLMQ 484
Query: 647 PTVNLSSEMILKYFK 691
PTVN SS+++LKY K
Sbjct: 483 PTVNASSKILLKYLK 439
Score = 112 bits (240), Expect(2) = 9e-043
Identities = 60/114 (52%), Positives = 71/114 (62%)
Frame = +3 / -2
Query: 699 RLLKMYSVIWWIFVXXXXXXXXXTKSQKRLDDTSAVHMQ*KFLI**TY*RPCIRLTLIPK 878
RL K+ S I W+ V K Q+ LD TSAV +*KFL+ *T+*RP I+ TLIPK
Sbjct: 428 RL*KIDSGI*WMSVMLPMLFFWHMKIQRHLDGTSAVQYE*KFLMS*TF*RPYIQHTLIPK 249
Query: 879 ILWKMMSTLYTALRNCRSWGGPSSL*RNPSVTLLNPTRHLAS*IEHPTRTVSIC 1040
L + LRN RS GGPS L*R PS T+ NPT+HLAS* EHPTR + C
Sbjct: 248 TLRRWKKVKL*VLRNFRS*GGPSGL*RRPSETVSNPTKHLAS*TEHPTRENNAC 87
Score = 110 bits (235), Expect(2) = 8e-039
Identities = 57/111 (51%), Positives = 61/111 (54%)
Frame = -1 / +2
Query: 1023 *LDVQFRMPNAL*DSTVSRRDSSIGLKVHPSFCXXXXXXXXXXXXXTKFLG*G*DGYMVF 844
*LD QFRMP+AL*DST+S R S GLKVHPSF KFLG* GY VF
Sbjct: 104 *LDAQFRMPDAL*DSTLSPRVFSTGLKVHPSF*SFSELITLPSSTSVKFLG*VYVGYKVF 283
Query: 843 SMFIISEIFIACELQMYRPDASGFXXXXXXXXXXXXXXXILLSTFSTVSRS 691
MF+ SE FI LQMYRPDASGF + FSTVS S
Sbjct: 284 RMFMTSETFIRTGLQMYRPDASGFSYARRRASATSRTSTRFQNLFSTVSCS 436
Score = 102 bits (218), Expect(2) = 6e-036
Identities = 47/85 (55%), Positives = 59/85 (69%)
Frame = +1 / -3
Query: 772 KARSVWTIHLQFTCNKNF*YDKHTEDHVSVLPLSQKFCGR*CQLCIQL*ETAEAGVDLQA 951
K+R +WT+HLQ + NK+F* KH+ED +S + LSQK G + + *ET+EA VDLQA
Sbjct: 355 KSRGIWTVHLQSSTNKSF*CHKHSEDLISNIHLSQKLYGGGRR*SYEF*ETSEARVDLQA 176
Query: 952 YRGIPP*HC*ILQGIWHPELNIQLG 1026
R P C ILQ IWHPEL+IQLG
Sbjct: 175 CREDPRRQCRILQSIWHPELSIQLG 101
Score = 91.8 bits (194), Expect(2) = 7e-056
Identities = 42/73 (57%), Positives = 47/73 (64%)
Frame = -1 / +2
Query: 690 LKYLRIISLLKFTVGCIKGPNTNDGQTVTTSSPVFAAKARASRSDSVLETKYXXXXXXXX 511
L+YLR I LL FTVGCIKGP+TNDG+ TTS PVFAA A+ASRS VLE+KY
Sbjct: 440 LRYLRRILLLAFTVGCIKGPSTNDGRIATTSIPVFAA*AKASRSARVLESKYQSSPFLHR 619
Query: 510 XXXXXXXXSNTLP 472
NTLP
Sbjct: 620 SSSDQLSSVNTLP 658
Score = 81.7 bits (172), Expect(2) = 9e-043
Identities = 40/74 (54%), Positives = 48/74 (64%)
Frame = +3 / -2
Query: 471 RVRCLMKTAGQMRITAXXXXXXXXFPKHCRNEKLLLLQQKQGWTL*LFVRH*YLDP*CSL 650
R + L+KTAGQ RI A FPK ++ +LLL+Q+K GW L*LF H YL P*CS
Sbjct: 659 RAKYLLKTAGQTRICAERVRIGICFPKRAQSVRLLLMQRKLGWML*LFYHHWYLAP*CSQ 480
Query: 651 Q*I*AAK*SLNISK 692
Q*+ A K S NISK
Sbjct: 479 Q*MRAVKFSSNISK 438
Score = 70.7 bits (148), Expect(2) = 8e-039
Identities = 35/68 (51%), Positives = 43/68 (63%)
Frame = -2 / +3
Query: 692 L*NI*GSFRCSNLL*AASRVQILMTDKQLQRPALFLLQKQELLVPTVFWKLNTNPPSSCS 513
L*+I*G F CS+ L AASR Q+ M + LQ P+ F L KQ+ FWK NTNP C+
Sbjct: 438 L*DI*GEFYCSHSLLAASRGQVPMMVE*LQHPSQFSLHKQKPHALRAFWKANTNPHPFCT 617
Query: 512 NPHLTSSL 489
+P LTS L
Sbjct: 618 DPRLTSCL 641
Score = 68.9 bits (144), Expect(2) = 6e-036
Identities = 35/75 (46%), Positives = 45/75 (60%)
Frame = +1 / -3
Query: 469 EG*GV**RLLVR*GLLQEEGGLVFSFQNTVGTRSSCFCSKNRAGRCNCLSVISIWTLDAA 648
+G + *R LVR G +Q+ GLVF+FQN C CS+N G C+ ++I W LDAA
Sbjct: 661 QGQSIY*RQLVRRGSVQKG*GLVFAFQNARRA*GFCLCSENWDGCCSYSTIIGTWPLDAA 482
Query: 649 YSKFEQRNDP*IFQR 693
S+ EQ N P I QR
Sbjct: 481 NSECEQ*NSPQISQR 437
Score = 64.3 bits (134), Expect(3) = 4e-029
Identities = 27/49 (55%), Positives = 35/49 (71%)
Frame = -3 / +1
Query: 691 FEIFKDHFAAQIYCRLHQGSKY**RTNSYNVQPCFCCKSKSFSFRQCFG 545
FEIF+++F A+I+C LHQG+KY * NSYN+ P F C SKS + FG
Sbjct: 439 FEIFEENFTARIHCWLHQGAKYQ*W*NSYNIHPSFRCISKSLTLCARFG 585
Score = 56.5 bits (117), Expect(3) = 4e-029
Identities = 25/38 (65%), Positives = 28/38 (73%)
Frame = -2 / +3
Query: 1025 PSWMFNSGCQMPCRIQQCHGGIPL*A*RSTPASAVSQS 912
PSWM +SGCQM CRI+ C G L A*RST AS VSQ+
Sbjct: 102 PSWMLSSGCQMLCRIRHCLRGSSLQA*RSTLASEVSQN 215
Score = 46.0 bits (94), Expect(3) = 4e-029
Identities = 20/39 (51%), Positives = 24/39 (61%)
Frame = -2 / +3
Query: 887 PQNFWDKGKTDTWSSVCLSYQKFLLHVNCRCIVQTLLAF 771
P +FWDK D SS CL +QK L ++CRC VQ L F
Sbjct: 240 P*SFWDKCMLDIRSSECL*HQKLLFVLDCRCTVQMPLDF 356
>gb|BE602876.2|BE602876 HVSMEh0100H17f Hordeum vulgare 5-45 DAP spike EST library
HVcDNA0009 (5 to 45 DAP) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEh0100H17f, mRNA sequence
Length = 505
Score = 306 bits (663), Expect = 1e-082
Identities = 130/160 (81%), Positives = 139/160 (86%)
Frame = +2 / +1
Query: 74 VCVTGAGGFVASELVKLLLSRGQYAVRGTVRDPGASKNAHLKVLEGAEERLQLLKADLMD 253
VCVTGAGGFVAS LVKLLLS+ Y VRGTVRDPG +KNAHLK LEGA ERLQLL ADL+D
Sbjct: 22 VCVTGAGGFVASWLVKLLLSKAHYTVRGTVRDPGNAKNAHLKALEGAGERLQLLSADLLD 201
Query: 254 YDSIASAVAGCEGVFHVASPVLSHRPSNPEVEVIAPAVTGTTNVLKACYEAKVRRVVVVS 433
YDSIASAVAGCEGVFHVASPV S R +NPE EVIAPAVTGT NVLKAC EAKV+RVV+VS
Sbjct: 202 YDSIASAVAGCEGVFHVASPVPSGRSTNPEEEVIAPAVTGTLNVLKACNEAKVKRVVIVS 381
Query: 434 SCGAVYANPIYPKGKVFDEDCWSDEDYCRKKEDWYLVSKT 553
SC AV+ NP +PKGKVF ED WSDED CRK EDWYL+SKT
Sbjct: 382 SCAAVFNNPNWPKGKVFTEDSWSDEDLCRKGEDWYLLSKT 501
Score = 237 bits (512), Expect = 1e-061
Identities = 110/160 (68%), Positives = 116/160 (72%)
Frame = -1 / -3
Query: 552 VLETKYXXXXXXXXXXXXXXXXSNTLPFG*IGLAYTAPHEDTTTTRLTFAS*QAFNTLVV 373
VLE+KY NTLP G +GL TA HEDT TTRLTFAS QAFNT V
Sbjct: 500 VLESKYQSSPFLHRSSSDQLSSVNTLPLGQLGLLNTAAHEDTMTTRLTFASLQAFNTFSV 321
Query: 372 PVTAGAMTSTSGLEGRWERTGLATWKTPSQPATADAMLS*SIRSALRSCNLSSAPSSTLR 193
PVTAGA+TS+SGL E TGLATWKTPSQPATADAMLS*S RSAL SC+LS APSS LR
Sbjct: 320 PVTAGAITSSSGLVDLPEGTGLATWKTPSQPATADAMLS*SSRSALSSCSLSPAPSSALR 141
Query: 192 WAFLLAPGSRTVPRTAYWPRERRSFTSSDATKPPAPVTHT 73
AFL PGSRTVPRT W ERRS TS +ATKPPAPVTHT
Sbjct: 140 *AFLALPGSRTVPRTV*WALERRSLTSHEATKPPAPVTHT 21
Score = 151 bits (325), Expect = 6e-036
Identities = 74/123 (60%), Positives = 81/123 (65%)
Frame = -2 / -1
Query: 551 FWKLNTNPPSSCSNPHLTSSLHQTPYPSDK*D*HTQLHMKTPPQLA*LLPHSKPLTHWLY 372
FWK NTNP C++P LTS L P *D TQ HMKT QLA*LLP KP TH +
Sbjct: 499 FWKANTNPHPFCTDPRLTSCLQ*ILCPWAS*DC*TQQHMKTL*QLA*LLPRCKPSTHSVC 320
Query: 371 LLQREL*PPPQGWRVDGKGQG*LHGRHPHSRQLLMQCCRSPSDQP*EAATFPQLLPAP*D 192
LLQ+ L* PQGW + KGQG* HGR PHS+Q QCCRSP+ Q * AA FPQ L AP*D
Sbjct: 319 LLQQGL*LLPQGWSICQKGQG*QHGRRPHSQQPPTQCCRSPAGQR*AAAAFPQHLLAP*D 140
Query: 191 GHS 183
HS
Sbjct: 139 EHS 131
Score = 150 bits (323), Expect = 1e-035
Identities = 69/112 (61%), Positives = 80/112 (71%)
Frame = -3 / -2
Query: 409 FCLIASL*HIGCTCYSGSYDLHLRVGGSMGKDRASYMEDTLTAGNC*CNAVVVHQISLEK 230
FCL+ASL HI C CYS Y+ LRVG S +DRAS MED LTA N NAVVV Q+S E+
Sbjct: 357 FCLVASLQHIQCACYSRGYNFFLRVGRSARRDRASNMEDALTASNRRRNAVVVQQVSAEQ 178
Query: 229 LQPFLSSFQHLEMGILASTRVAHGAADRVLAPGEEELHQLRRDEAASAGHAH 74
LQPF S+F LEM IL+ T +AHGAAD V+ GEEEL + DEA+ AGHAH
Sbjct: 177 LQPFPSTF*RLEMSILSITGIAHGAADSVVGLGEEELDEP*GDEASCAGHAH 22
Score = 144 bits (309), Expect = 1e-033
Identities = 80/136 (58%), Positives = 86/136 (63%)
Frame = +3 / +2
Query: 144 TRSAAPCATLVLARMPISRCWKELRKGCSFSRLI*WTTTALHQQLPAVRVSSM*LALSFP 323
T SAAPCA V+ RM ISR K L KGCS S L WTTTAL ++L AVR SSM LALS
Sbjct: 92 TLSAAPCAIPVMLRMLISRR*KVLGKGCSCSALTCWTTTALRRRLLAVRASSMLLALSLL 271
Query: 324 IDPPTLRWRS*LPL*QVQPMC*RLAMRQKLGELWWCLHVELCMLILFIRRVRCLMKTAGQ 503
D PTLR + * L*Q MC*RLA RQKL EL CLHV LC IL R + L+KTAGQ
Sbjct: 272 ADRPTLRKKL*PLL*QAH*MC*RLATRQKLSELS*CLHVLLCSTILTGPRAKYLLKTAGQ 451
Query: 504 MRITAXXXXXXXXFPK 551
RI A FPK
Sbjct: 452 TRICAERVRIGICFPK 499
Score = 82.6 bits (174), Expect(3) = 6e-028
Identities = 41/73 (56%), Positives = 51/73 (69%)
Frame = +1 / +3
Query: 334 QP*GGGHSSRCNRYNQCVKGLL*GKS*ASCGGVFMWSCVC*SYLSEG*GV**RLLVR*GL 513
QP*G +S CNR+ +CV+GL GKS*ASC VFM CV S L++G + *R LVR G
Sbjct: 282 QP*GRSYSPCCNRHTECVEGLQRGKS*ASCHSVFMCCCVQQS*LAQGQSIY*RQLVRRGS 461
Query: 514 LQEEGGLVFSFQN 552
+Q+ GLVF+FQN
Sbjct: 462 VQKG*GLVFAFQN 500
Score = 44.6 bits (91), Expect(3) = 6e-028
Identities = 19/29 (65%), Positives = 21/29 (72%)
Frame = +1 / +3
Query: 184 ECPSQGAGRS*GKVAASQG*SDGLRQHCI 270
EC SQGA R GK AA+Q * GLRQHC+
Sbjct: 132 ECSSQGARRCWGKAAAAQR*PAGLRQHCV 218
Score = 35.4 bits (71), Expect(3) = 6e-028
Identities = 13/19 (68%), Positives = 15/19 (78%)
Frame = +1 / +3
Query: 112 AGEAPPLPGPIRGPRHRAR 168
A +APPL GP+ PRHRAR
Sbjct: 60 ARQAPPLQGPLHCPRHRAR 116
>gb|AV920406.1|AV920406 AV920406 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags13n08 3', mRNA sequence
Length = 662
Score = 188 bits (404), Expect(2) = 2e-082
Identities = 79/109 (72%), Positives = 91/109 (83%)
Frame = +2 / -3
Query: 698 ETVENVLSNMVDIRDVADALLLTYEKPEASGRYICSSHAIKISDMINILKTMYPSYPYPK 877
ETVEN N+VD+RDVADALLL YE PEASGRYICS IK+SD+INILKT+YP+Y YPK
Sbjct: 429 ETVENRFWNLVDVRDVADALLLAYENPEASGRYICSPVRIKVSDVINILKTLYPTYTYPK 250
Query: 878 NFVEDDVNSVYSSEKLQKLGWTFKPIEESLRDTVESYKAFGILN*TSN* 1024
NF E + V SSEKLQKLGWTF+P+E++L D+VESYKA GILN* SN*
Sbjct: 249 NFTEVEEGKVMSSEKLQKLGWTFRPVEKTLGDSVESYKASGILN*ASN* 103
Score = 146 bits (314), Expect(2) = 7e-056
Identities = 67/109 (61%), Positives = 77/109 (70%)
Frame = -3 / +1
Query: 1024 LVGCSIQDAKCLVGFNSVTEGFLYRLEGPPQLLQFLRAVYRVDIIFHKIFGIRVRRIHGL 845
LVGCS+QDA+C VGF++V+EG LYR EGPP LL+FLR K+FGI V I GL
Sbjct: 103 LVGCSVQDARCFVGFDTVSEGLLYRPEGPP*LLKFLRTHNFTFFHLRKVFGISVCWI*GL 282
Query: 844 QYVYHIRNFYCM*TADVSSRRFWLFVSQKKSISNITNIHHITEYIFNSL 698
Q VY IRNFY TADV SR W+F+ QKKSI NIT+IH I E IF SL
Sbjct: 283 QNVYDIRNFYSYWTADVPSRCLWIFICQKKSIGNITDIH*IPESIFYSL 429
Score = 139 bits (298), Expect(2) = 2e-082
Identities = 55/74 (74%), Positives = 63/74 (85%)
Frame = +2 / -3
Query: 470 KGKVFDEDCWSDEDYCRKKEDWYLVSKTLSEREALAFAAKTGLDVVTVCPSLVFGPLMQP 649
KGKVF ED WSDED CRK EDWYL+SKT +EREA A+AAKTG+DVV + PSLV GPLMQP
Sbjct: 660 KGKVFTEDSWSDEDLCRKGEDWYLLSKTRAEREAFAYAAKTGMDVVAILPSLVLGPLMQP 481
Query: 650 TVNLSSEMILKYFK 691
TVN SS+++LKY K
Sbjct: 480 TVNASSKILLKYLK 439
Score = 112 bits (240), Expect(2) = 9e-043
Identities = 60/114 (52%), Positives = 71/114 (62%)
Frame = +3 / -1
Query: 699 RLLKMYSVIWWIFVXXXXXXXXXTKSQKRLDDTSAVHMQ*KFLI**TY*RPCIRLTLIPK 878
RL K+ S I W+ V K Q+ LD TSAV +*KFL+ *T+*RP I+ TLIPK
Sbjct: 428 RL*KIDSGI*WMSVMLPMLFFWHMKIQRHLDGTSAVQYE*KFLMS*TF*RPYIQHTLIPK 249
Query: 879 ILWKMMSTLYTALRNCRSWGGPSSL*RNPSVTLLNPTRHLAS*IEHPTRTVSIC 1040
L + LRN RS GGPS L*R PS T+ NPT+HLAS* EHPTR + C
Sbjct: 248 TLRRWKKVKL*VLRNFRS*GGPSGL*RRPSETVSNPTKHLAS*TEHPTRENNAC 87
Score = 110 bits (235), Expect(2) = 8e-039
Identities = 57/111 (51%), Positives = 61/111 (54%)
Frame = -1 / +2
Query: 1023 *LDVQFRMPNAL*DSTVSRRDSSIGLKVHPSFCXXXXXXXXXXXXXTKFLG*G*DGYMVF 844
*LD QFRMP+AL*DST+S R S GLKVHPSF KFLG* GY VF
Sbjct: 104 *LDAQFRMPDAL*DSTLSPRVFSTGLKVHPSF*SFSELITLPSSTSVKFLG*VYVGYKVF 283
Query: 843 SMFIISEIFIACELQMYRPDASGFXXXXXXXXXXXXXXXILLSTFSTVSRS 691
MF+ SE FI LQMYRPDASGF + FSTVS S
Sbjct: 284 RMFMTSETFIRTGLQMYRPDASGFSYARRRASATSRTSTRFQNLFSTVSCS 436
Score = 102 bits (218), Expect(2) = 6e-036
Identities = 47/85 (55%), Positives = 59/85 (69%)
Frame = +1 / -2
Query: 772 KARSVWTIHLQFTCNKNF*YDKHTEDHVSVLPLSQKFCGR*CQLCIQL*ETAEAGVDLQA 951
K+R +WT+HLQ + NK+F* KH+ED +S + LSQK G + + *ET+EA VDLQA
Sbjct: 355 KSRGIWTVHLQSSTNKSF*CHKHSEDLISNIHLSQKLYGGGRR*SYEF*ETSEARVDLQA 176
Query: 952 YRGIPP*HC*ILQGIWHPELNIQLG 1026
R P C ILQ IWHPEL+IQLG
Sbjct: 175 CREDPRRQCRILQSIWHPELSIQLG 101
Score = 91.8 bits (194), Expect(2) = 7e-056
Identities = 42/73 (57%), Positives = 47/73 (64%)
Frame = -1 / +2
Query: 690 LKYLRIISLLKFTVGCIKGPNTNDGQTVTTSSPVFAAKARASRSDSVLETKYXXXXXXXX 511
L+YLR I LL FTVGCIKGP+TNDG+ TTS PVFAA A+ASRS VLE+KY
Sbjct: 440 LRYLRRILLLAFTVGCIKGPSTNDGRIATTSIPVFAA*AKASRSARVLESKYQSSPFLHR 619
Query: 510 XXXXXXXXSNTLP 472
NTLP
Sbjct: 620 SSSDQLSSVNTLP 658
Score = 81.7 bits (172), Expect(2) = 9e-043
Identities = 40/74 (54%), Positives = 48/74 (64%)
Frame = +3 / -1
Query: 471 RVRCLMKTAGQMRITAXXXXXXXXFPKHCRNEKLLLLQQKQGWTL*LFVRH*YLDP*CSL 650
R + L+KTAGQ RI A FPK ++ +LLL+Q+K GW L*LF H YL P*CS
Sbjct: 659 RAKYLLKTAGQTRICAERVRIGICFPKRAQSVRLLLMQRKLGWML*LFYHHWYLAP*CSQ 480
Query: 651 Q*I*AAK*SLNISK 692
Q*+ A K S NISK
Sbjct: 479 Q*MRAVKFSSNISK 438
Score = 70.7 bits (148), Expect(2) = 8e-039
Identities = 35/68 (51%), Positives = 43/68 (63%)
Frame = -2 / +3
Query: 692 L*NI*GSFRCSNLL*AASRVQILMTDKQLQRPALFLLQKQELLVPTVFWKLNTNPPSSCS 513
L*+I*G F CS+ L AASR Q+ M + LQ P+ F L KQ+ FWK NTNP C+
Sbjct: 438 L*DI*GEFYCSHSLLAASRGQVPMMVE*LQHPSQFSLHKQKPHALRAFWKANTNPHPFCT 617
Query: 512 NPHLTSSL 489
+P LTS L
Sbjct: 618 DPRLTSCL 641
Score = 68.9 bits (144), Expect(2) = 6e-036
Identities = 35/75 (46%), Positives = 45/75 (60%)
Frame = +1 / -2
Query: 469 EG*GV**RLLVR*GLLQEEGGLVFSFQNTVGTRSSCFCSKNRAGRCNCLSVISIWTLDAA 648
+G + *R LVR G +Q+ GLVF+FQN C CS+N G C+ ++I W LDAA
Sbjct: 661 QGQSIY*RQLVRRGSVQKG*GLVFAFQNARRA*GFCLCSENWDGCCSYSTIIGTWPLDAA 482
Query: 649 YSKFEQRNDP*IFQR 693
S+ EQ N P I QR
Sbjct: 481 NSECEQ*NSPQISQR 437
Score = 64.3 bits (134), Expect(3) = 4e-029
Identities = 27/49 (55%), Positives = 35/49 (71%)
Frame = -3 / +1
Query: 691 FEIFKDHFAAQIYCRLHQGSKY**RTNSYNVQPCFCCKSKSFSFRQCFG 545
FEIF+++F A+I+C LHQG+KY * NSYN+ P F C SKS + FG
Sbjct: 439 FEIFEENFTARIHCWLHQGAKYQ*W*NSYNIHPSFRCISKSLTLCARFG 585
Score = 56.5 bits (117), Expect(3) = 4e-029
Identities = 25/38 (65%), Positives = 28/38 (73%)
Frame = -2 / +3
Query: 1025 PSWMFNSGCQMPCRIQQCHGGIPL*A*RSTPASAVSQS 912
PSWM +SGCQM CRI+ C G L A*RST AS VSQ+
Sbjct: 102 PSWMLSSGCQMLCRIRHCLRGSSLQA*RSTLASEVSQN 215
Score = 46.0 bits (94), Expect(3) = 4e-029
Identities = 20/39 (51%), Positives = 24/39 (61%)
Frame = -2 / +3
Query: 887 PQNFWDKGKTDTWSSVCLSYQKFLLHVNCRCIVQTLLAF 771
P +FWDK D SS CL +QK L ++CRC VQ L F
Sbjct: 240 P*SFWDKCMLDIRSSECL*HQKLLFVLDCRCTVQMPLDF 356
>gb|AV919693.1|AV919693 AV919693 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags7d04 3', mRNA sequence
Length = 661
Score = 188 bits (404), Expect(2) = 2e-082
Identities = 79/109 (72%), Positives = 91/109 (83%)
Frame = +2 / -1
Query: 698 ETVENVLSNMVDIRDVADALLLTYEKPEASGRYICSSHAIKISDMINILKTMYPSYPYPK 877
ETVEN N+VD+RDVADALLL YE PEASGRYICS IK+SD+INILKT+YP+Y YPK
Sbjct: 430 ETVENRFWNLVDVRDVADALLLAYENPEASGRYICSPVRIKVSDVINILKTLYPTYTYPK 251
Query: 878 NFVEDDVNSVYSSEKLQKLGWTFKPIEESLRDTVESYKAFGILN*TSN* 1024
NF E + V SSEKLQKLGWTF+P+E++L D+VESYKA GILN* SN*
Sbjct: 250 NFTEVEEGKVMSSEKLQKLGWTFRPVEKTLGDSVESYKASGILN*ASN* 104
Score = 146 bits (314), Expect(2) = 7e-056
Identities = 67/109 (61%), Positives = 77/109 (70%)
Frame = -3 / +2
Query: 1024 LVGCSIQDAKCLVGFNSVTEGFLYRLEGPPQLLQFLRAVYRVDIIFHKIFGIRVRRIHGL 845
LVGCS+QDA+C VGF++V+EG LYR EGPP LL+FLR K+FGI V I GL
Sbjct: 104 LVGCSVQDARCFVGFDTVSEGLLYRPEGPP*LLKFLRTHNFTFFHLRKVFGISVCWI*GL 283
Query: 844 QYVYHIRNFYCM*TADVSSRRFWLFVSQKKSISNITNIHHITEYIFNSL 698
Q VY IRNFY TADV SR W+F+ QKKSI NIT+IH I E IF SL
Sbjct: 284 QNVYDIRNFYSYWTADVPSRCLWIFICQKKSIGNITDIH*IPESIFYSL 430
Score = 139 bits (298), Expect(2) = 2e-082
Identities = 55/74 (74%), Positives = 63/74 (85%)
Frame = +2 / -1
Query: 470 KGKVFDEDCWSDEDYCRKKEDWYLVSKTLSEREALAFAAKTGLDVVTVCPSLVFGPLMQP 649
KGKVF ED WSDED CRK EDWYL+SKT +EREA A+AAKTG+DVV + PSLV GPLMQP
Sbjct: 661 KGKVFTEDSWSDEDLCRKGEDWYLLSKTRAEREAFAYAAKTGMDVVAILPSLVLGPLMQP 482
Query: 650 TVNLSSEMILKYFK 691
TVN SS+++LKY K
Sbjct: 481 TVNASSKILLKYLK 440
Score = 112 bits (240), Expect(2) = 9e-043
Identities = 60/114 (52%), Positives = 71/114 (62%)
Frame = +3 / -2
Query: 699 RLLKMYSVIWWIFVXXXXXXXXXTKSQKRLDDTSAVHMQ*KFLI**TY*RPCIRLTLIPK 878
RL K+ S I W+ V K Q+ LD TSAV +*KFL+ *T+*RP I+ TLIPK
Sbjct: 429 RL*KIDSGI*WMSVMLPMLFFWHMKIQRHLDGTSAVQYE*KFLMS*TF*RPYIQHTLIPK 250
Query: 879 ILWKMMSTLYTALRNCRSWGGPSSL*RNPSVTLLNPTRHLAS*IEHPTRTVSIC 1040
L + LRN RS GGPS L*R PS T+ NPT+HLAS* EHPTR + C
Sbjct: 249 TLRRWKKVKL*VLRNFRS*GGPSGL*RRPSETVSNPTKHLAS*TEHPTRENNAC 88
Score = 110 bits (235), Expect(2) = 8e-039
Identities = 57/111 (51%), Positives = 61/111 (54%)
Frame = -1 / +3
Query: 1023 *LDVQFRMPNAL*DSTVSRRDSSIGLKVHPSFCXXXXXXXXXXXXXTKFLG*G*DGYMVF 844
*LD QFRMP+AL*DST+S R S GLKVHPSF KFLG* GY VF
Sbjct: 105 *LDAQFRMPDAL*DSTLSPRVFSTGLKVHPSF*SFSELITLPSSTSVKFLG*VYVGYKVF 284
Query: 843 SMFIISEIFIACELQMYRPDASGFXXXXXXXXXXXXXXXILLSTFSTVSRS 691
MF+ SE FI LQMYRPDASGF + FSTVS S
Sbjct: 285 RMFMTSETFIRTGLQMYRPDASGFSYARRRASATSRTSTRFQNLFSTVSCS 437
Score = 102 bits (218), Expect(2) = 1e-035
Identities = 47/85 (55%), Positives = 59/85 (69%)
Frame = +1 / -3
Query: 772 KARSVWTIHLQFTCNKNF*YDKHTEDHVSVLPLSQKFCGR*CQLCIQL*ETAEAGVDLQA 951
K+R +WT+HLQ + NK+F* KH+ED +S + LSQK G + + *ET+EA VDLQA
Sbjct: 356 KSRGIWTVHLQSSTNKSF*CHKHSEDLISNIHLSQKLYGGGRR*SYEF*ETSEARVDLQA 177
Query: 952 YRGIPP*HC*ILQGIWHPELNIQLG 1026
R P C ILQ IWHPEL+IQLG
Sbjct: 176 CREDPRRQCRILQSIWHPELSIQLG 102
Score = 91.8 bits (194), Expect(2) = 7e-056
Identities = 42/73 (57%), Positives = 47/73 (64%)
Frame = -1 / +3
Query: 690 LKYLRIISLLKFTVGCIKGPNTNDGQTVTTSSPVFAAKARASRSDSVLETKYXXXXXXXX 511
L+YLR I LL FTVGCIKGP+TNDG+ TTS PVFAA A+ASRS VLE+KY
Sbjct: 441 LRYLRRILLLAFTVGCIKGPSTNDGRIATTSIPVFAA*AKASRSARVLESKYQSSPFLHR 620
Query: 510 XXXXXXXXSNTLP 472
NTLP
Sbjct: 621 SSSDQLSSVNTLP 659
Score = 81.7 bits (172), Expect(2) = 9e-043
Identities = 40/74 (54%), Positives = 48/74 (64%)
Frame = +3 / -2
Query: 471 RVRCLMKTAGQMRITAXXXXXXXXFPKHCRNEKLLLLQQKQGWTL*LFVRH*YLDP*CSL 650
R + L+KTAGQ RI A FPK ++ +LLL+Q+K GW L*LF H YL P*CS
Sbjct: 660 RAKYLLKTAGQTRICAERVRIGICFPKRAQSVRLLLMQRKLGWML*LFYHHWYLAP*CSQ 481
Query: 651 Q*I*AAK*SLNISK 692
Q*+ A K S NISK
Sbjct: 480 Q*MRAVKFSSNISK 439
Score = 70.7 bits (148), Expect(2) = 8e-039
Identities = 35/68 (51%), Positives = 43/68 (63%)
Frame = -2 / +1
Query: 692 L*NI*GSFRCSNLL*AASRVQILMTDKQLQRPALFLLQKQELLVPTVFWKLNTNPPSSCS 513
L*+I*G F CS+ L AASR Q+ M + LQ P+ F L KQ+ FWK NTNP C+
Sbjct: 439 L*DI*GEFYCSHSLLAASRGQVPMMVE*LQHPSQFSLHKQKPHALRAFWKANTNPHPFCT 618
Query: 512 NPHLTSSL 489
+P LTS L
Sbjct: 619 DPRLTSCL 642
Score = 68.0 bits (142), Expect(2) = 1e-035
Identities = 35/74 (47%), Positives = 44/74 (59%)
Frame = +1 / -3
Query: 472 G*GV**RLLVR*GLLQEEGGLVFSFQNTVGTRSSCFCSKNRAGRCNCLSVISIWTLDAAY 651
G + *R LVR G +Q+ GLVF+FQN C CS+N G C+ ++I W LDAA
Sbjct: 659 GQSIY*RQLVRRGSVQKG*GLVFAFQNARRA*GFCLCSENWDGCCSYSTIIGTWPLDAAN 480
Query: 652 SKFEQRNDP*IFQR 693
S+ EQ N P I QR
Sbjct: 479 SECEQ*NSPQISQR 438
Score = 64.3 bits (134), Expect(3) = 4e-029
Identities = 27/49 (55%), Positives = 35/49 (71%)
Frame = -3 / +2
Query: 691 FEIFKDHFAAQIYCRLHQGSKY**RTNSYNVQPCFCCKSKSFSFRQCFG 545
FEIF+++F A+I+C LHQG+KY * NSYN+ P F C SKS + FG
Sbjct: 440 FEIFEENFTARIHCWLHQGAKYQ*W*NSYNIHPSFRCISKSLTLCARFG 586
Score = 56.5 bits (117), Expect(3) = 4e-029
Identities = 25/38 (65%), Positives = 28/38 (73%)
Frame = -2 / +1
Query: 1025 PSWMFNSGCQMPCRIQQCHGGIPL*A*RSTPASAVSQS 912
PSWM +SGCQM CRI+ C G L A*RST AS VSQ+
Sbjct: 103 PSWMLSSGCQMLCRIRHCLRGSSLQA*RSTLASEVSQN 216
Score = 46.0 bits (94), Expect(3) = 4e-029
Identities = 20/39 (51%), Positives = 24/39 (61%)
Frame = -2 / +1
Query: 887 PQNFWDKGKTDTWSSVCLSYQKFLLHVNCRCIVQTLLAF 771
P +FWDK D SS CL +QK L ++CRC VQ L F
Sbjct: 241 P*SFWDKCMLDIRSSECL*HQKLLFVLDCRCTVQMPLDF 357
>gb|AV918687.1|AV918687 AV918687 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags21o04 3', mRNA sequence
Length = 630
Score = 188 bits (404), Expect(2) = 2e-082
Identities = 79/109 (72%), Positives = 91/109 (83%)
Frame = +2 / -1
Query: 698 ETVENVLSNMVDIRDVADALLLTYEKPEASGRYICSSHAIKISDMINILKTMYPSYPYPK 877
ETVEN N+VD+RDVADALLL YE PEASGRYICS IK+SD+INILKT+YP+Y YPK
Sbjct: 399 ETVENRFWNLVDVRDVADALLLAYENPEASGRYICSPVRIKVSDVINILKTLYPTYTYPK 220
Query: 878 NFVEDDVNSVYSSEKLQKLGWTFKPIEESLRDTVESYKAFGILN*TSN* 1024
NF E + V SSEKLQKLGWTF+P+E++L D+VESYKA GILN* SN*
Sbjct: 219 NFTEVEEGKVMSSEKLQKLGWTFRPVEKTLGDSVESYKASGILN*ASN* 73
Score = 146 bits (314), Expect(2) = 7e-056
Identities = 67/109 (61%), Positives = 77/109 (70%)
Frame = -3 / +1
Query: 1024 LVGCSIQDAKCLVGFNSVTEGFLYRLEGPPQLLQFLRAVYRVDIIFHKIFGIRVRRIHGL 845
LVGCS+QDA+C VGF++V+EG LYR EGPP LL+FLR K+FGI V I GL
Sbjct: 73 LVGCSVQDARCFVGFDTVSEGLLYRPEGPP*LLKFLRTHNFTFFHLRKVFGISVCWI*GL 252
Query: 844 QYVYHIRNFYCM*TADVSSRRFWLFVSQKKSISNITNIHHITEYIFNSL 698
Q VY IRNFY TADV SR W+F+ QKKSI NIT+IH I E IF SL
Sbjct: 253 QNVYDIRNFYSYWTADVPSRCLWIFICQKKSIGNITDIH*IPESIFYSL 399
Score = 139 bits (298), Expect(2) = 2e-082
Identities = 55/74 (74%), Positives = 63/74 (85%)
Frame = +2 / -1
Query: 470 KGKVFDEDCWSDEDYCRKKEDWYLVSKTLSEREALAFAAKTGLDVVTVCPSLVFGPLMQP 649
KGKVF ED WSDED CRK EDWYL+SKT +EREA A+AAKTG+DVV + PSLV GPLMQP
Sbjct: 630 KGKVFTEDSWSDEDLCRKGEDWYLLSKTRAEREAFAYAAKTGMDVVAILPSLVLGPLMQP 451
Query: 650 TVNLSSEMILKYFK 691
TVN SS+++LKY K
Sbjct: 450 TVNASSKILLKYLK 409
Score = 112 bits (240), Expect(2) = 9e-043
Identities = 60/114 (52%), Positives = 71/114 (62%)
Frame = +3 / -2
Query: 699 RLLKMYSVIWWIFVXXXXXXXXXTKSQKRLDDTSAVHMQ*KFLI**TY*RPCIRLTLIPK 878
RL K+ S I W+ V K Q+ LD TSAV +*KFL+ *T+*RP I+ TLIPK
Sbjct: 398 RL*KIDSGI*WMSVMLPMLFFWHMKIQRHLDGTSAVQYE*KFLMS*TF*RPYIQHTLIPK 219
Query: 879 ILWKMMSTLYTALRNCRSWGGPSSL*RNPSVTLLNPTRHLAS*IEHPTRTVSIC 1040
L + LRN RS GGPS L*R PS T+ NPT+HLAS* EHPTR + C
Sbjct: 218 TLRRWKKVKL*VLRNFRS*GGPSGL*RRPSETVSNPTKHLAS*TEHPTRENNAC 57
Score = 110 bits (235), Expect(2) = 8e-039
Identities = 57/111 (51%), Positives = 61/111 (54%)
Frame = -1 / +2
Query: 1023 *LDVQFRMPNAL*DSTVSRRDSSIGLKVHPSFCXXXXXXXXXXXXXTKFLG*G*DGYMVF 844
*LD QFRMP+AL*DST+S R S GLKVHPSF KFLG* GY VF
Sbjct: 74 *LDAQFRMPDAL*DSTLSPRVFSTGLKVHPSF*SFSELITLPSSTSVKFLG*VYVGYKVF 253
Query: 843 SMFIISEIFIACELQMYRPDASGFXXXXXXXXXXXXXXXILLSTFSTVSRS 691
MF+ SE FI LQMYRPDASGF + FSTVS S
Sbjct: 254 RMFMTSETFIRTGLQMYRPDASGFSYARRRASATSRTSTRFQNLFSTVSCS 406
Score = 102 bits (218), Expect(2) = 1e-035
Identities = 47/85 (55%), Positives = 59/85 (69%)
Frame = +1 / -3
Query: 772 KARSVWTIHLQFTCNKNF*YDKHTEDHVSVLPLSQKFCGR*CQLCIQL*ETAEAGVDLQA 951
K+R +WT+HLQ + NK+F* KH+ED +S + LSQK G + + *ET+EA VDLQA
Sbjct: 325 KSRGIWTVHLQSSTNKSF*CHKHSEDLISNIHLSQKLYGGGRR*SYEF*ETSEARVDLQA 146
Query: 952 YRGIPP*HC*ILQGIWHPELNIQLG 1026
R P C ILQ IWHPEL+IQLG
Sbjct: 145 CREDPRRQCRILQSIWHPELSIQLG 71
Score = 91.8 bits (194), Expect(2) = 7e-056
Identities = 42/73 (57%), Positives = 47/73 (64%)
Frame = -1 / +2
Query: 690 LKYLRIISLLKFTVGCIKGPNTNDGQTVTTSSPVFAAKARASRSDSVLETKYXXXXXXXX 511
L+YLR I LL FTVGCIKGP+TNDG+ TTS PVFAA A+ASRS VLE+KY
Sbjct: 410 LRYLRRILLLAFTVGCIKGPSTNDGRIATTSIPVFAA*AKASRSARVLESKYQSSPFLHR 589
Query: 510 XXXXXXXXSNTLP 472
NTLP
Sbjct: 590 SSSDQLSSVNTLP 628
Score = 81.7 bits (172), Expect(2) = 9e-043
Identities = 40/74 (54%), Positives = 48/74 (64%)
Frame = +3 / -2
Query: 471 RVRCLMKTAGQMRITAXXXXXXXXFPKHCRNEKLLLLQQKQGWTL*LFVRH*YLDP*CSL 650
R + L+KTAGQ RI A FPK ++ +LLL+Q+K GW L*LF H YL P*CS
Sbjct: 629 RAKYLLKTAGQTRICAERVRIGICFPKRAQSVRLLLMQRKLGWML*LFYHHWYLAP*CSQ 450
Query: 651 Q*I*AAK*SLNISK 692
Q*+ A K S NISK
Sbjct: 449 Q*MRAVKFSSNISK 408
Score = 70.7 bits (148), Expect(2) = 8e-039
Identities = 35/68 (51%), Positives = 43/68 (63%)
Frame = -2 / +3
Query: 692 L*NI*GSFRCSNLL*AASRVQILMTDKQLQRPALFLLQKQELLVPTVFWKLNTNPPSSCS 513
L*+I*G F CS+ L AASR Q+ M + LQ P+ F L KQ+ FWK NTNP C+
Sbjct: 408 L*DI*GEFYCSHSLLAASRGQVPMMVE*LQHPSQFSLHKQKPHALRAFWKANTNPHPFCT 587
Query: 512 NPHLTSSL 489
+P LTS L
Sbjct: 588 DPRLTSCL 611
Score = 68.0 bits (142), Expect(2) = 1e-035
Identities = 35/74 (47%), Positives = 44/74 (59%)
Frame = +1 / -3
Query: 472 G*GV**RLLVR*GLLQEEGGLVFSFQNTVGTRSSCFCSKNRAGRCNCLSVISIWTLDAAY 651
G + *R LVR G +Q+ GLVF+FQN C CS+N G C+ ++I W LDAA
Sbjct: 628 GQSIY*RQLVRRGSVQKG*GLVFAFQNARRA*GFCLCSENWDGCCSYSTIIGTWPLDAAN 449
Query: 652 SKFEQRNDP*IFQR 693
S+ EQ N P I QR
Sbjct: 448 SECEQ*NSPQISQR 407
Score = 64.3 bits (134), Expect(3) = 4e-029
Identities = 27/49 (55%), Positives = 35/49 (71%)
Frame = -3 / +1
Query: 691 FEIFKDHFAAQIYCRLHQGSKY**RTNSYNVQPCFCCKSKSFSFRQCFG 545
FEIF+++F A+I+C LHQG+KY * NSYN+ P F C SKS + FG
Sbjct: 409 FEIFEENFTARIHCWLHQGAKYQ*W*NSYNIHPSFRCISKSLTLCARFG 555
Score = 56.5 bits (117), Expect(3) = 4e-029
Identities = 25/38 (65%), Positives = 28/38 (73%)
Frame = -2 / +3
Query: 1025 PSWMFNSGCQMPCRIQQCHGGIPL*A*RSTPASAVSQS 912
PSWM +SGCQM CRI+ C G L A*RST AS VSQ+
Sbjct: 72 PSWMLSSGCQMLCRIRHCLRGSSLQA*RSTLASEVSQN 185
Score = 46.0 bits (94), Expect(3) = 4e-029
Identities = 20/39 (51%), Positives = 24/39 (61%)
Frame = -2 / +3
Query: 887 PQNFWDKGKTDTWSSVCLSYQKFLLHVNCRCIVQTLLAF 771
P +FWDK D SS CL +QK L ++CRC VQ L F
Sbjct: 210 P*SFWDKCMLDIRSSECL*HQKLLFVLDCRCTVQMPLDF 326
>gb|AV914608.1|AV914608 AV914608 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags7d04 5', mRNA sequence
Length = 514
Score = 301 bits (652), Expect = 5e-081
Identities = 128/160 (80%), Positives = 137/160 (85%)
Frame = +2 / +2
Query: 65 RKSVCVTGAGGFVASELVKLLLSRGQYAVRGTVRDPGASKNAHLKVLEGAEERLQLLKAD 244
R VCVTGAGGFVAS LVKLLLS+ Y VRGTVRDPG +KNAHLK LEGA ERLQLL AD
Sbjct: 35 RSVVCVTGAGGFVASWLVKLLLSKAHYTVRGTVRDPGNAKNAHLKALEGAGERLQLLSAD 214
Query: 245 LMDYDSIASAVAGCEGVFHVASPVLSHRPSNPEVEVIAPAVTGTTNVLKACYEAKVRRVV 424
L+DYDSIASAVAGCEGVFHVASPV S R +NPE EVIAPAVTGT NVLKAC EAKV+RVV
Sbjct: 215 LLDYDSIASAVAGCEGVFHVASPVPSGRSTNPEEEVIAPAVTGTLNVLKACNEAKVKRVV 394
Query: 425 VVSSCGAVYANPIYPKGKVFDEDCWSDEDYCRKKEDWYLV 544
+VSSC AV+ NP +PKGKVF ED WSDED CRK EDWYL+
Sbjct: 395 IVSSCAAVFNNPNWPKGKVFTEDSWSDEDLCRKGEDWYLL 514
Score = 231 bits (499), Expect = 6e-060
Identities = 107/157 (68%), Positives = 113/157 (71%)
Frame = -1 / -2
Query: 543 TKYXXXXXXXXXXXXXXXXSNTLPFG*IGLAYTAPHEDTTTTRLTFAS*QAFNTLVVPVT 364
+KY NTLP G +GL TA HEDT TTRLTFAS QAFNT VPVT
Sbjct: 513 SKYQSSPFLHRSSSDQLSSVNTLPLGQLGLLNTAAHEDTMTTRLTFASLQAFNTFSVPVT 334
Query: 363 AGAMTSTSGLEGRWERTGLATWKTPSQPATADAMLS*SIRSALRSCNLSSAPSSTLRWAF 184
AGA+TS+SGL E TGLATWKTPSQPATADAMLS*S RSAL SC+LS APSS LR AF
Sbjct: 333 AGAITSSSGLVDLPEGTGLATWKTPSQPATADAMLS*SSRSALSSCSLSPAPSSALR*AF 154
Query: 183 LLAPGSRTVPRTAYWPRERRSFTSSDATKPPAPVTHT 73
L PGSRTVPRT W ERRS TS +ATKPPAPVTHT
Sbjct: 153 LALPGSRTVPRTV*WALERRSLTSHEATKPPAPVTHT 43
Score = 154 bits (331), Expect = 9e-037
Identities = 71/117 (60%), Positives = 82/117 (70%)
Frame = -3 / -1
Query: 409 FCLIASL*HIGCTCYSGSYDLHLRVGGSMGKDRASYMEDTLTAGNC*CNAVVVHQISLEK 230
FCL+ASL HI C CYS Y+ LRVG S +DRAS MED LTA N NAVVV Q+S E+
Sbjct: 379 FCLVASLQHIQCACYSRGYNFFLRVGRSTRRDRASNMEDALTASNRRRNAVVVQQVSAEQ 200
Query: 229 LQPFLSSFQHLEMGILASTRVAHGAADRVLAPGEEELHQLRRDEAASAGHAHALPHR 59
LQPF S+F LEM IL+ T +AHGAAD V+ GEEEL + DEA+ AGHAH P R
Sbjct: 199 LQPFPSTF*RLEMSILSITGIAHGAADSVVGLGEEELDEP*GDEASCAGHAHNAPXR 29
Score = 142 bits (304), Expect = 5e-033
Identities = 77/125 (61%), Positives = 84/125 (67%)
Frame = +3 / +3
Query: 144 TRSAAPCATLVLARMPISRCWKELRKGCSFSRLI*WTTTALHQQLPAVRVSSM*LALSFP 323
T SAAPCA V+ RM ISR K L KGCS S L WTTTAL ++L AVR SSM LALS
Sbjct: 114 TLSAAPCAIPVMLRMLISRR*KVLGKGCSCSALTCWTTTALRRRLLAVRASSMLLALSLL 293
Query: 324 IDPPTLRWRS*LPL*QVQPMC*RLAMRQKLGELWWCLHVELCMLILFIRRVRCLMKTAGQ 503
+D PTLR + * L*Q MC*RLA RQKL EL CLHV LC IL R + L+KTAGQ
Sbjct: 294 VDRPTLRKKL*PLL*QAH*MC*RLATRQKLSELS*CLHVLLCSTILTGPRAKYLLKTAGQ 473
Query: 504 MRITA 518
RI A
Sbjct: 474 TRICA 488
Score = 142 bits (304), Expect = 5e-033
Identities = 71/119 (59%), Positives = 78/119 (65%)
Frame = -2 / -3
Query: 539 NTNPPSSCSNPHLTSSLHQTPYPSDK*D*HTQLHMKTPPQLA*LLPHSKPLTHWLYLLQR 360
NTNP C++P LTS L P *D TQ HMKT QLA*LLP KP TH + LLQ+
Sbjct: 509 NTNPHPFCTDPRLTSCLQ*ILCPWAS*DC*TQQHMKTL*QLA*LLPRCKPSTHSVCLLQQ 330
Query: 359 EL*PPPQGWRVDGKGQG*LHGRHPHSRQLLMQCCRSPSDQP*EAATFPQLLPAP*DGHS 183
L* PQGW + KGQG* HGR PHS+Q QCCRSP+ Q * AA FPQ L AP*D HS
Sbjct: 329 GL*LLPQGWSIYQKGQG*QHGRRPHSQQPPTQCCRSPAGQR*AAAAFPQHLLAP*DEHS 153
Score = 74.8 bits (157), Expect(3) = 1e-025
Identities = 38/70 (54%), Positives = 48/70 (68%)
Frame = +1 / +1
Query: 334 QP*GGGHSSRCNRYNQCVKGLL*GKS*ASCGGVFMWSCVC*SYLSEG*GV**RLLVR*GL 513
QP*G +S CNR+ +CV+GL GKS*ASC VFM CV S L++G + *R LVR G
Sbjct: 304 QP*GRSYSPCCNRHTECVEGLQRGKS*ASCHSVFMCCCVQQS*LAQGQSIY*RQLVRRGS 483
Query: 514 LQEEGGLVFS 543
+Q+ GLVF+
Sbjct: 484 VQKG*GLVFA 513
Score = 44.6 bits (91), Expect(3) = 1e-025
Identities = 19/29 (65%), Positives = 21/29 (72%)
Frame = +1 / +1
Query: 184 ECPSQGAGRS*GKVAASQG*SDGLRQHCI 270
EC SQGA R GK AA+Q * GLRQHC+
Sbjct: 154 ECSSQGARRCWGKAAAAQR*PAGLRQHCV 240
Score = 35.4 bits (71), Expect(3) = 1e-025
Identities = 13/19 (68%), Positives = 15/19 (78%)
Frame = +1 / +1
Query: 112 AGEAPPLPGPIRGPRHRAR 168
A +APPL GP+ PRHRAR
Sbjct: 82 ARQAPPLQGPLHCPRHRAR 138
>gb|CA031581.1|CA031581 HX10G17r HX Hordeum vulgare subsp. vulgare cDNA clone HX10G17
5-PRIME, mRNA sequence
Length = 622
Score = 299 bits (648), Expect = 2e-080
Identities = 129/174 (74%), Positives = 140/174 (80%)
Frame = +2 / +1
Query: 17 QREQRRVFKPKTMDPVRKSVCVTGAGGFVASELVKLLLSRGQYAVRGTVRDPGASKNAHL 196
Q RR RK+VCVTGAGGF+AS LVKLLLS+G Y VRGTVRDPG +KNAHL
Sbjct: 97 QERGRRKSMAAAAAAARKTVCVTGAGGFIASWLVKLLLSKGHYTVRGTVRDPGNAKNAHL 276
Query: 197 KVLEGAEERLQLLKADLMDYDSIASAVAGCEGVFHVASPVLSHRPSNPEVEVIAPAVTGT 376
K LEGA ERLQLL ADL++YDSIASAVAGC+GVFHVASPV S R +NPE EVIAPAVTGT
Sbjct: 277 KALEGAGERLQLLSADLLNYDSIASAVAGCDGVFHVASPVPSGRSTNPEEEVIAPAVTGT 456
Query: 377 TNVLKACYEAKVRRVVVVSSCGAVYANPIYPKGKVFDEDCWSDEDYCRKKEDWY 538
NVLKACYEAKV+RVV+VSS AV NP +PKGK FDED WSDED CRK EDWY
Sbjct: 457 LNVLKACYEAKVKRVVMVSSVAAVSNNPNWPKGKFFDEDSWSDEDLCRKGEDWY 618
Score = 218 bits (471), Expect = 4e-056
Identities = 105/158 (66%), Positives = 110/158 (69%)
Frame = -1 / -3
Query: 540 KYXXXXXXXXXXXXXXXXSNTLPFG*IGLAYTAPHEDTTTTRLTFAS*QAFNTLVVPVTA 361
KY S LP G +GL TA EDT TTRLTFAS*QAF T VPVTA
Sbjct: 620 KYQSSPFLQRSSSDQLSSSKNLPLGQLGLLDTAATEDTMTTRLTFAS*QAFKTFSVPVTA 441
Query: 360 GAMTSTSGLEGRWERTGLATWKTPSQPATADAMLS*SIRSALRSCNLSSAPSSTLRWAFL 181
GA+TS+SGL E TGLATWKTPSQPATADAMLS* RSAL SCNLS APSS LR AFL
Sbjct: 440 GAITSSSGLVDLPEGTGLATWKTPSQPATADAMLS*FSRSALSSCNLSPAPSSALR*AFL 261
Query: 180 LAPGSRTVPRTAYWPRERRSFTSSDATKPPAPVTHTLF 67
PGSRTVPRT P ERRS TS +A KPPAPVTHT+F
Sbjct: 260 ALPGSRTVPRTV*CPLERRSLTSHEAMKPPAPVTHTVF 147
Score = 144 bits (310), Expect = 7e-034
Identities = 69/127 (54%), Positives = 85/127 (66%)
Frame = -3 / -2
Query: 409 FCLIASL*HIGCTCYSGSYDLHLRVGGSMGKDRASYMEDTLTAGNC*CNAVVVHQISLEK 230
F L+AS I C CYS Y+ LR+G S +DRAS MED +TA N * NAVVV Q+ E+
Sbjct: 489 FRLVASFQDIQCACYSRGYNFFLRIG*SARRDRASNMEDPITASNR*RNAVVVQQVGAEQ 310
Query: 229 LQPFLSSFQHLEMGILASTRVAHGAADRVLAPGEEELHQLRRDEAASAGHAHALPHRIHC 50
LQPF S+F L+M IL+ T ++HGAADRV++ GEEEL + R DEA+ A HAH LP R
Sbjct: 309 LQPFPSTF*CLKMSILSITGISHGAADRVVSLGEEELDEPRGDEASCASHAHGLPRRRRR 130
Query: 49 FRFEYSS 29
R SS
Sbjct: 129 RRHALSS 109
Score = 124 bits (265), Expect = 1e-027
Identities = 64/119 (53%), Positives = 73/119 (61%)
Frame = -2 / -1
Query: 539 NTNPPSSCSNPHLTSSLHQTPYPSDK*D*HTQLHMKTPPQLA*LLPHSKPLTHWLYLLQR 360
NTNP C +P LTS LH+ P *D TQ +K P QLA*L P SK H + LLQ+
Sbjct: 619 NTNPHPFCRDPRLTSCLHRRICP*AS*DYWTQQQLKIP*QLA*LSPRSKLSRHSVCLLQQ 440
Query: 359 EL*PPPQGWRVDGKGQG*LHGRHPHSRQLLMQCCRSPSDQP*EAATFPQLLPAP*DGHS 183
L* PQ W + KGQG* HGR HS+Q L QCCRS + + * ATFPQ L P*D HS
Sbjct: 439 GL*LLPQDWLICQKGQG*QHGRPHHSQQPLTQCCRSSAGRR*AVATFPQHLLVP*DEHS 263
Score = 111 bits (237), Expect(2) = 3e-029
Identities = 67/125 (53%), Positives = 76/125 (60%)
Frame = +3 / +2
Query: 144 TRSAAPCATLVLARMPISRCWKELRKGCSFSRLI*WTTTALHQQLPAVRVSSM*LALSFP 323
TRSAAPC V+ RM I R K L KGC+ S TTTAL Q+L AV SSM LALS
Sbjct: 224 TRSAAPCEIPVMLRMLILRH*KVLGKGCNCSAPTC*TTTALRQRLLAVMGSSMLLALSLL 403
Query: 324 IDPPTLRWRS*LPL*QVQPMC*RLAMRQKLGELWWCLHVELCMLILFIRRVRCLMKTAGQ 503
D P LR + * L*Q M *+LA R+KL EL W L + LC +IL R MKTAGQ
Sbjct: 404 ADQPILRKKL*PLL*QAH*MS*KLATRRKLSELSWYLQLLLCPIILTGLRANSSMKTAGQ 583
Query: 504 MRITA 518
RI+A
Sbjct: 584 TRISA 598
Score = 37.7 bits (76), Expect(2) = 3e-029
Identities = 16/38 (42%), Positives = 20/38 (52%)
Frame = +1 / +3
Query: 55 GSGAEEXXXXXXXXXXXVGAGEAPPLPGPIRGPRHRAR 168
G G E+ + A +APPL G + GPRHRAR
Sbjct: 135 GGGEEDRVRDWRRRLHRLVARQAPPLQGTLHGPRHRAR 248
>gb|AV919125.1|AV919125 AV919125 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags4k02 3', mRNA sequence
Length = 751
Score = 188 bits (404), Expect(2) = 4e-080
Identities = 79/109 (72%), Positives = 91/109 (83%)
Frame = +2 / -2
Query: 698 ETVENVLSNMVDIRDVADALLLTYEKPEASGRYICSSHAIKISDMINILKTMYPSYPYPK 877
ETVEN N+VD+RDVADALLL YE PEASGRYICS IK+SD+INILKT+YP+Y YPK
Sbjct: 432 ETVENRFWNLVDVRDVADALLLAYENPEASGRYICSPVRIKVSDVINILKTLYPTYTYPK 253
Query: 878 NFVEDDVNSVYSSEKLQKLGWTFKPIEESLRDTVESYKAFGILN*TSN* 1024
NF E + V SSEKLQKLGWTF+P+E++L D+VESYKA GILN* SN*
Sbjct: 252 NFTEVEEGKVMSSEKLQKLGWTFRPVEKTLGDSVESYKASGILN*ASN* 106
Score = 146 bits (314), Expect(3) = 5e-059
Identities = 67/109 (61%), Positives = 77/109 (70%)
Frame = -3 / +1
Query: 1024 LVGCSIQDAKCLVGFNSVTEGFLYRLEGPPQLLQFLRAVYRVDIIFHKIFGIRVRRIHGL 845
LVGCS+QDA+C VGF++V+EG LYR EGPP LL+FLR K+FGI V I GL
Sbjct: 106 LVGCSVQDARCFVGFDTVSEGLLYRPEGPP*LLKFLRTHNFTFFHLRKVFGISVCWI*GL 285
Query: 844 QYVYHIRNFYCM*TADVSSRRFWLFVSQKKSISNITNIHHITEYIFNSL 698
Q VY IRNFY TADV SR W+F+ QKKSI NIT+IH I E IF SL
Sbjct: 286 QNVYDIRNFYSYWTADVPSRCLWIFICQKKSIGNITDIH*IPESIFYSL 432
Score = 131 bits (281), Expect(2) = 4e-080
Identities = 54/88 (61%), Positives = 65/88 (73%)
Frame = +2 / -2
Query: 428 VSSCGAVYANPIYPKGKVFDEDCWSDEDYCRKKEDWYLVSKTLSEREALAFAAKTGLDVV 607
V C V + P+ K +D WSDED CRK EDWYL+SKT +EREA A+AAKTG+DVV
Sbjct: 705 VFMCCCVQQSLTGPRAKYLLKDSWSDEDLCRKGEDWYLLSKTRAEREAFAYAAKTGMDVV 526
Query: 608 TVCPSLVFGPLMQPTVNLSSEMILKYFK 691
+ PSLV GPLMQPTVN SS+++LKY K
Sbjct: 525 AILPSLVLGPLMQPTVNASSKILLKYLK 442
Score = 112 bits (240), Expect(3) = 2e-046
Identities = 60/114 (52%), Positives = 71/114 (62%)
Frame = +3 / -3
Query: 699 RLLKMYSVIWWIFVXXXXXXXXXTKSQKRLDDTSAVHMQ*KFLI**TY*RPCIRLTLIPK 878
RL K+ S I W+ V K Q+ LD TSAV +*KFL+ *T+*RP I+ TLIPK
Sbjct: 431 RL*KIDSGI*WMSVMLPMLFFWHMKIQRHLDGTSAVQYE*KFLMS*TF*RPYIQHTLIPK 252
Query: 879 ILWKMMSTLYTALRNCRSWGGPSSL*RNPSVTLLNPTRHLAS*IEHPTRTVSIC 1040
L + LRN RS GGPS L*R PS T+ NPT+HLAS* EHPTR + C
Sbjct: 251 TLRRWKKVKL*VLRNFRS*GGPSGL*RRPSETVSNPTKHLAS*TEHPTRENNAC 90
Score = 110 bits (235), Expect(3) = 8e-041
Identities = 57/111 (51%), Positives = 61/111 (54%)
Frame = -1 / +2
Query: 1023 *LDVQFRMPNAL*DSTVSRRDSSIGLKVHPSFCXXXXXXXXXXXXXTKFLG*G*DGYMVF 844
*LD QFRMP+AL*DST+S R S GLKVHPSF KFLG* GY VF
Sbjct: 107 *LDAQFRMPDAL*DSTLSPRVFSTGLKVHPSF*SFSELITLPSSTSVKFLG*VYVGYKVF 286
Query: 843 SMFIISEIFIACELQMYRPDASGFXXXXXXXXXXXXXXXILLSTFSTVSRS 691
MF+ SE FI LQMYRPDASGF + FSTVS S
Sbjct: 287 RMFMTSETFIRTGLQMYRPDASGFSYARRRASATSRTSTRFQNLFSTVSCS 439
Score = 102 bits (218), Expect(4) = 1e-039
Identities = 47/85 (55%), Positives = 59/85 (69%)
Frame = +1 / -1
Query: 772 KARSVWTIHLQFTCNKNF*YDKHTEDHVSVLPLSQKFCGR*CQLCIQL*ETAEAGVDLQA 951
K+R +WT+HLQ + NK+F* KH+ED +S + LSQK G + + *ET+EA VDLQA
Sbjct: 358 KSRGIWTVHLQSSTNKSF*CHKHSEDLISNIHLSQKLYGGGRR*SYEF*ETSEARVDLQA 179
Query: 952 YRGIPP*HC*ILQGIWHPELNIQLG 1026
R P C ILQ IWHPEL+IQLG
Sbjct: 178 CREDPRRQCRILQSIWHPELSIQLG 104
Score = 86.8 bits (183), Expect(3) = 5e-059
Identities = 38/52 (73%), Positives = 43/52 (82%)
Frame = -1 / +2
Query: 690 LKYLRIISLLKFTVGCIKGPNTNDGQTVTTSSPVFAAKARASRSDSVLETKY 535
L+YLR I LL FTVGCIKGP+TNDG+ TTS PVFAA A+ASRS VLE+KY
Sbjct: 443 LRYLRRILLLAFTVGCIKGPSTNDGRIATTSIPVFAA*AKASRSARVLESKY 598
Score = 76.7 bits (161), Expect(3) = 2e-046
Identities = 38/68 (55%), Positives = 44/68 (64%)
Frame = +3 / -3
Query: 489 KTAGQMRITAXXXXXXXXFPKHCRNEKLLLLQQKQGWTL*LFVRH*YLDP*CSLQ*I*AA 668
KTAGQ RI A FPK ++ +LLL+Q+K GW L*LF H YL P*CS Q*+ A
Sbjct: 644 KTAGQTRICAERVRIGICFPKRAQSVRLLLMQRKLGWML*LFYHHWYLAP*CSQQ*MRAV 465
Query: 669 K*SLNISK 692
K S NISK
Sbjct: 464 KFSSNISK 441
Score = 71.6 bits (150), Expect(3) = 8e-041
Identities = 36/74 (48%), Positives = 44/74 (59%)
Frame = -2 / +3
Query: 692 L*NI*GSFRCSNLL*AASRVQILMTDKQLQRPALFLLQKQELLVPTVFWKLNTNPPSSCS 513
L*+I*G F CS+ L AASR Q+ M + LQ P+ F L KQ+ FWK NTNP C+
Sbjct: 441 L*DI*GEFYCSHSLLAASRGQVPMMVE*LQHPSQFSLHKQKPHALRAFWKANTNPHPFCT 620
Query: 512 NPHLTSSLHQTPYP 471
+P LTS L P
Sbjct: 621 DPRLTSCLSVNTLP 662
Score = 67.0 bits (140), Expect(4) = 1e-039
Identities = 33/68 (48%), Positives = 41/68 (60%)
Frame = +1 / -1
Query: 490 RLLVR*GLLQEEGGLVFSFQNTVGTRSSCFCSKNRAGRCNCLSVISIWTLDAAYSKFEQR 669
R LVR G +Q+ GLVF+FQN C CS+N G C+ ++I W LDAA S+ EQ
Sbjct: 643 RQLVRRGSVQKG*GLVFAFQNARRA*GFCLCSENWDGCCSYSTIIGTWPLDAANSECEQ* 464
Query: 670 NDP*IFQR 693
N P I QR
Sbjct: 463 NSPQISQR 440
Score = 64.3 bits (134), Expect(3) = 4e-029
Identities = 27/49 (55%), Positives = 35/49 (71%)
Frame = -3 / +1
Query: 691 FEIFKDHFAAQIYCRLHQGSKY**RTNSYNVQPCFCCKSKSFSFRQCFG 545
FEIF+++F A+I+C LHQG+KY * NSYN+ P F C SKS + FG
Sbjct: 442 FEIFEENFTARIHCWLHQGAKYQ*W*NSYNIHPSFRCISKSLTLCARFG 588
Score = 56.5 bits (117), Expect(3) = 4e-029
Identities = 25/38 (65%), Positives = 28/38 (73%)
Frame = -2 / +3
Query: 1025 PSWMFNSGCQMPCRIQQCHGGIPL*A*RSTPASAVSQS 912
PSWM +SGCQM CRI+ C G L A*RST AS VSQ+
Sbjct: 105 PSWMLSSGCQMLCRIRHCLRGSSLQA*RSTLASEVSQN 218
Score = 46.0 bits (94), Expect(3) = 4e-029
Identities = 20/39 (51%), Positives = 24/39 (61%)
Frame = -2 / +3
Query: 887 PQNFWDKGKTDTWSSVCLSYQKFLLHVNCRCIVQTLLAF 771
P +FWDK D SS CL +QK L ++CRC VQ L F
Sbjct: 243 P*SFWDKCMLDIRSSECL*HQKLLFVLDCRCTVQMPLDF 359
Score = 35.9 bits (72), Expect(3) = 2e-046
Identities = 14/24 (58%), Positives = 19/24 (79%)
Frame = +2 / -3
Query: 407 KVRRVVVVSSCGAVYANPIYPKGK 478
KV+RVV+VSSC AV+ NP +G+
Sbjct: 728 KVKRVVIVSSCAAVFNNP*LAQGQ 657
Score = 34.1 bits (68), Expect(3) = 5e-059
Identities = 14/18 (77%), Positives = 14/18 (77%)
Frame = -1 / +1
Query: 459 GLAYTAPHEDTTTTRLTF 406
GL TA HEDT TTRLTF
Sbjct: 676 GLLNTAAHEDTMTTRLTF 729
Score = 27.2 bits (53), Expect(4) = 1e-039
Identities = 12/18 (66%), Positives = 12/18 (66%)
Frame = +3 / -1
Query: 405 QKLGELWWCLHVELCMLI 458
QKL EL CLHV LC I
Sbjct: 730 QKLSELS*CLHVLLCSTI 677
Score = 24.0 bits (46), Expect(3) = 8e-041
Identities = 12/15 (80%), Positives = 12/15 (80%)
Frame = -2 / +2
Query: 449 TQLHMKTPPQLA*LL 405
TQ HMKT QLA*LL
Sbjct: 686 TQQHMKTL*QLA*LL 730
Score = 22.6 bits (43), Expect(4) = 1e-039
Identities = 8/11 (72%), Positives = 9/11 (81%)
Frame = +2 / -1
Query: 458 PIYPKGKVFDE 490
P +PKGKVF E
Sbjct: 676 PNWPKGKVFTE 644
>gb|CA007077.1|CA007077 HU06K19r HU Hordeum vulgare subsp. vulgare cDNA clone HU06K19
5-PRIME, mRNA sequence
Length = 459
Score = 284 bits (614), Expect = 8e-076
Identities = 119/149 (79%), Positives = 130/149 (87%)
Frame = +2 / +1
Query: 155 GTVRDPGASKNAHLKVLEGAEERLQLLKADLMDYDSIASAVAGCEGVFHVASPVLSHRPS 334
GTVRDPG +KNAHLK LEGA ERLQLL ADL+DYDSIASAVAGCEGVFHVASPV S R +
Sbjct: 13 GTVRDPGNAKNAHLKALEGAGERLQLLSADLLDYDSIASAVAGCEGVFHVASPVPSGRST 192
Query: 335 NPEVEVIAPAVTGTTNVLKACYEAKVRRVVVVSSCGAVYANPIYPKGKVFDEDCWSDEDY 514
NPE EVIAPAVTGT NVLKAC EAKV+RVV+VSSC AV+ NP +PKGKVF ED WSDED
Sbjct: 193 NPEEEVIAPAVTGTLNVLKACNEAKVKRVVIVSSCAAVFNNPNWPKGKVFTEDSWSDEDL 372
Query: 515 CRKKEDWYLVSKTLSEREALAFAAKTGLD 601
CRK EDWYL+SKT +EREA A+AAKTG+D
Sbjct: 373 CRKGEDWYLLSKTRAEREAFAYAAKTGMD 459
Score = 209 bits (451), Expect = 2e-053
Identities = 101/149 (67%), Positives = 107/149 (71%)
Frame = -1 / -2
Query: 600 SSPVFAAKARASRSDSVLETKYXXXXXXXXXXXXXXXXSNTLPFG*IGLAYTAPHEDTTT 421
S PVFAA A+ASRS VLE+KY NTLP G +GL TA HEDT T
Sbjct: 458 SIPVFAA*AKASRSARVLESKYQSSPFLHRSSSDQLSSVNTLPLGQLGLLNTAAHEDTMT 279
Query: 420 TRLTFAS*QAFNTLVVPVTAGAMTSTSGLEGRWERTGLATWKTPSQPATADAMLS*SIRS 241
TRLTFAS QAFNT VPVTAGA+TS+SGL E TGLATWKTPSQPATADAMLS*S RS
Sbjct: 278 TRLTFASLQAFNTFSVPVTAGAITSSSGLVDLPEGTGLATWKTPSQPATADAMLS*SSRS 99
Query: 240 ALRSCNLSSAPSSTLRWAFLLAPGSRTVP 154
AL SC+LS APSS LR AFL PGSRTVP
Sbjct: 98 ALSSCSLSPAPSSALR*AFLALPGSRTVP 12
Score = 162 bits (348), Expect = 4e-039
Identities = 85/149 (57%), Positives = 97/149 (65%)
Frame = +3 / +2
Query: 153 AAPCATLVLARMPISRCWKELRKGCSFSRLI*WTTTALHQQLPAVRVSSM*LALSFPIDP 332
AAPCA V+ RM ISR K L KGCS S L WTTTAL ++L AVR SSM LALS +D
Sbjct: 11 AAPCAIPVMLRMLISRR*KVLGKGCSCSALTCWTTTALRRRLLAVRASSMLLALSLLVDR 190
Query: 333 PTLRWRS*LPL*QVQPMC*RLAMRQKLGELWWCLHVELCMLILFIRRVRCLMKTAGQMRI 512
PTLR + * L*Q MC*RLA RQKL EL CLHV LC IL R + L+KTAGQ RI
Sbjct: 191 PTLRKKL*PLL*QAH*MC*RLATRQKLSELS*CLHVLLCSTILTGPRAKYLLKTAGQTRI 370
Query: 513 TAXXXXXXXXFPKHCRNEKLLLLQQKQGW 599
A FPK ++ +LLL+Q+K GW
Sbjct: 371 CAERVRIGICFPKRAQSVRLLLMQRKLGW 457
Score = 158 bits (340), Expect = 5e-038
Identities = 79/139 (56%), Positives = 88/139 (63%)
Frame = -2 / -3
Query: 599 PALFLLQKQELLVPTVFWKLNTNPPSSCSNPHLTSSLHQTPYPSDK*D*HTQLHMKTPPQ 420
P+ F L KQ+ FWK NTNP C++P LTS L P *D TQ HMKT Q
Sbjct: 457 PSQFSLHKQKPHALRAFWKANTNPHPFCTDPRLTSCLQ*ILCPWAS*DC*TQQHMKTL*Q 278
Query: 419 LA*LLPHSKPLTHWLYLLQREL*PPPQGWRVDGKGQG*LHGRHPHSRQLLMQCCRSPSDQ 240
LA*LLP KP TH + LLQ+ L* PQGW + KGQG* HGR PHS+Q QCCRSP+ Q
Sbjct: 277 LA*LLPRCKPSTHSVCLLQQGL*LLPQGWSIYQKGQG*QHGRRPHSQQPPTQCCRSPAGQ 98
Query: 239 P*EAATFPQLLPAP*DGHS 183
* AA FPQ L AP*D HS
Sbjct: 97 R*AAAAFPQHLLAP*DEHS 41
Score = 119 bits (254), Expect = 4e-026
Identities = 54/86 (62%), Positives = 62/86 (72%)
Frame = -3 / -1
Query: 409 FCLIASL*HIGCTCYSGSYDLHLRVGGSMGKDRASYMEDTLTAGNC*CNAVVVHQISLEK 230
FCL+ASL HI C CYS Y+ LRVG S +DRAS MED LTA N NAVVV Q+S E+
Sbjct: 267 FCLVASLQHIQCACYSRGYNFFLRVGRSTRRDRASNMEDALTASNRRRNAVVVQQVSAEQ 88
Query: 229 LQPFLSSFQHLEMGILASTRVAHGAA 152
LQPF S+F LEM IL+ T +AHGAA
Sbjct: 87 LQPFPSTF*RLEMSILSITGIAHGAA 10
Score = 91.3 bits (193), Expect(2) = 3e-025
Identities = 46/89 (51%), Positives = 57/89 (64%)
Frame = +1 / +3
Query: 334 QP*GGGHSSRCNRYNQCVKGLL*GKS*ASCGGVFMWSCVC*SYLSEG*GV**RLLVR*GL 513
QP*G +S CNR+ +CV+GL GKS*ASC VFM CV S L++G + *R LVR G
Sbjct: 192 QP*GRSYSPCCNRHTECVEGLQRGKS*ASCHSVFMCCCVQQS*LAQGQSIY*RQLVRRGS 371
Query: 514 LQEEGGLVFSFQNTVGTRSSCFCSKNRAG 600
+Q+ GLVF+FQN C CS+N G
Sbjct: 372 VQKG*GLVFAFQNARRA*GFCLCSENWDG 458
Score = 44.6 bits (91), Expect(2) = 3e-025
Identities = 19/29 (65%), Positives = 21/29 (72%)
Frame = +1 / +3
Query: 184 ECPSQGAGRS*GKVAASQG*SDGLRQHCI 270
EC SQGA R GK AA+Q * GLRQHC+
Sbjct: 42 ECSSQGARRCWGKAAAAQR*PAGLRQHCV 128
>gb|BE195648.3|BE195648 HVSMEh0090A21f Hordeum vulgare 5-45 DAP spike EST library
HVcDNA0009 (5 to 45 DAP) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEh0090A21f, mRNA sequence
Length = 919
Score = 184 bits (396), Expect(2) = 3e-072
Identities = 72/129 (55%), Positives = 100/129 (77%)
Frame = +2 / +2
Query: 293 VFHVASPVLSHRPSNPEVEVIAPAVTGTTNVLKACYEAKVRRVVVVSSCGAVYANPIYPK 472
VFH+A+PV + +PE EV+APAV GT+NVLKAC KV++V+V+SS AV NP +P+
Sbjct: 2 VFHLATPVPEDKIVDPESEVLAPAVKGTSNVLKACSAMKVQKVIVLSSTAAVDFNPNWPQ 181
Query: 473 GKVFDEDCWSDEDYCRKKEDWYLVSKTLSEREALAFAAKTGLDVVTVCPSLVFGPLMQPT 652
K+ DE CWSD+D+C+K EDWY V+K ++E+ + ++ K GL+VVTVCP LVFGPL+QPT
Sbjct: 182 DKLKDESCWSDKDFCQKNEDWYSVAKIVAEQASFEYSEKNGLNVVTVCPPLVFGPLLQPT 361
Query: 653 VNLSSEMIL 679
VN SS+ ++
Sbjct: 362 VNTSSKFLI 388
Score = 108 bits (231), Expect(2) = 3e-072
Identities = 46/103 (44%), Positives = 69/103 (66%)
Frame = +2 / +2
Query: 698 ETVENVLSNMVDIRDVADALLLTYEKPEASGRYICSSHAIKISDMINILKTMYPSYPYPK 877
+ + N L ++VD+RDVADALLL YEK E+ GRYIC+ + I +D++++LK M+P Y Y
Sbjct: 410 DVMSNKLWHIVDVRDVADALLLVYEKAESYGRYICTPNNICTTDLVDLLKKMHPQYSYVN 589
Query: 878 NFVEDDVNSVYSSEKLQKLGWTFKPIEESLRDTVESYKAFGIL 1006
N V+ D + SS+KL+ LGW E+L D+V+ Y+ +L
Sbjct: 590 NIVDVDRKAPISSQKLKDLGWKPPKAGETLSDSVDWYEKAXLL 718
>gb|BG369084.2|BG369084 HVSMEi0021K17f Hordeum vulgare 20 DAP spike EST library HVcDNA0010
(20 DAP) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEi0021K17f, mRNA sequence
Length = 592
Score = 189 bits (408), Expect(2) = 3e-071
Identities = 82/100 (82%), Positives = 88/100 (88%)
Frame = +2 / +2
Query: 152 RGTVRDPGASKNAHLKVLEGAEERLQLLKADLMDYDSIASAVAGCEGVFHVASPVLSHRP 331
RGTVRDPG +KNAHLK LEGA ERLQLL ADL+DYDSIASAVAGCEGVFHVASPV S R
Sbjct: 122 RGTVRDPGNAKNAHLKALEGAGERLQLLSADLLDYDSIASAVAGCEGVFHVASPVPSGRS 301
Query: 332 SNPEVEVIAPAVTGTTNVLKACYEAKVRRVVVVSSCGAVY 451
+NPE EVIAPAVTGT NVLKAC EA V+RVV+VSSC AV+
Sbjct: 302 TNPEEEVIAPAVTGTLNVLKACNEAXVKRVVIVSSCAAVF 421
Score = 166 bits (358), Expect(2) = 1e-049
Identities = 78/99 (78%), Positives = 81/99 (81%)
Frame = -1 / -2
Query: 447 TAPHEDTTTTRLTFAS*QAFNTLVVPVTAGAMTSTSGLEGRWERTGLATWKTPSQPATAD 268
TA HEDT TTRLT AS QAFNT VPVTAGA+TS+SGL E TGLATWKTPSQPATAD
Sbjct: 417 TAAHEDTMTTRLTXASLQAFNTFSVPVTAGAITSSSGLVDLPEGTGLATWKTPSQPATAD 238
Query: 267 AMLS*SIRSALRSCNLSSAPSSTLRWAFLLAPGSRTVPR 151
AMLS*S RSAL SC+LS APSS LR AFL PGSRTVPR
Sbjct: 237 AMLS*SSRSALSSCSLSPAPSSALR*AFLALPGSRTVPR 121
Score = 118 bits (252), Expect(2) = 6e-033
Identities = 54/91 (59%), Positives = 63/91 (69%)
Frame = -3 / -1
Query: 406 CLIASL*HIGCTCYSGSYDLHLRVGGSMGKDRASYMEDTLTAGNC*CNAVVVHQISLEKL 227
CL+ASL HI C CYS Y+ LRVG S +DRAS MED LTA N NAVVV Q+S E+L
Sbjct: 376 CLVASLQHIQCACYSRGYNFFLRVGRSARRDRASNMEDALTASNRRRNAVVVQQVSAEQL 197
Query: 226 QPFLSSFQHLEMGILASTRVAHGAADRVLAP 134
QPF S+F LEM IL+ T +AHGAA + P
Sbjct: 196 QPFPSTF*RLEMSILSITGIAHGAAGQCSGP 104
Score = 117 bits (251), Expect(2) = 6e-029
Identities = 56/89 (62%), Positives = 61/89 (68%)
Frame = -2 / -3
Query: 449 TQLHMKTPPQLA*LLPHSKPLTHWLYLLQREL*PPPQGWRVDGKGQG*LHGRHPHSRQLL 270
TQ HMKT QLA*L P KP TH + LLQ+ L* PQGW + KGQG* HGR PHS+Q
Sbjct: 419 TQQHMKTL*QLA*LXPRCKPSTHSVCLLQQGL*LLPQGWSICQKGQG*QHGRRPHSQQPP 240
Query: 269 MQCCRSPSDQP*EAATFPQLLPAP*DGHS 183
QCCRSP+ Q * A FPQ L AP*D HS
Sbjct: 239 TQCCRSPAGQR*AVAAFPQHLLAP*DEHS 153
Score = 112 bits (239), Expect(2) = 1e-033
Identities = 61/99 (61%), Positives = 66/99 (66%)
Frame = +3 / +3
Query: 153 AAPCATLVLARMPISRCWKELRKGCSFSRLI*WTTTALHQQLPAVRVSSM*LALSFPIDP 332
AAPCA V+ RM ISR K L KGC+ S L WTTTAL ++L AVR SSM LALS D
Sbjct: 123 AAPCAIPVMLRMLISRR*KVLGKGCNCSALTCWTTTALRRRLLAVRASSMLLALSLLADR 302
Query: 333 PTLRWRS*LPL*QVQPMC*RLAMRQKLGELWWCLHVELC 449
PTLR + * L*Q MC*RLA R KL EL CLHV LC
Sbjct: 303 PTLRKKL*PLL*QAH*MC*RLATRXKLSELS*CLHVLLC 419
Score = 100 bits (212), Expect(2) = 3e-071
Identities = 37/55 (67%), Positives = 46/55 (83%)
Frame = +2 / +3
Query: 455 NPIYPKGKVFDEDCWSDEDYCRKKEDWYLVSKTLSEREALAFAAKTGLDVVTVCP 619
NP +PK KVF ED WSD+D C+K EDWYL+SKT ++REA A+AAKTG+DVVT+ P
Sbjct: 426 NPNWPKAKVFTEDSWSDKDLCKKGEDWYLLSKTRAKREAFAYAAKTGMDVVTILP 590
Score = 53.8 bits (111), Expect(3) = 4e-021
Identities = 23/39 (58%), Positives = 27/39 (69%)
Frame = +1 / +1
Query: 334 QP*GGGHSSRCNRYNQCVKGLL*GKS*ASCGGVFMWSCV 450
QP*G +S CNR+ +CV+GL G S*ASC VFM CV
Sbjct: 304 QP*GRSYSPCCNRHTECVEGLQRGXS*ASCHSVFMCCCV 420
Score = 51.9 bits (107), Expect(2) = 1e-033
Identities = 23/48 (47%), Positives = 31/48 (64%)
Frame = +3 / +1
Query: 471 RVRCLMKTAGQMRITAXXXXXXXXFPKHCRNEKLLLLQQKQGWTL*LF 614
R + L+KTAGQ +I A FPK ++ +LLL+Q+K GW L*LF
Sbjct: 442 RPKYLLKTAGQTKICAKRVRIGICFPKRAQSVRLLLMQRKLGWML*LF 585
Score = 51.0 bits (105), Expect(2) = 1e-049
Identities = 26/56 (46%), Positives = 30/56 (53%)
Frame = -1 / -1
Query: 621 DGQTVTTSSPVFAAKARASRSDSVLETKYXXXXXXXXXXXXXXXXSNTLPFG*IGL 454
DG+ VTTS PVFAA A+ASR VLE+KY NTL G +GL
Sbjct: 592 DGRIVTTSIPVFAA*AKASRFARVLESKYQSSPFLHRSLSDQLSSVNTLALGQLGL 425
Score = 43.2 bits (88), Expect(2) = 6e-033
Identities = 22/51 (43%), Positives = 27/51 (52%)
Frame = -2 / -2
Query: 608 LQRPALFLLQKQELLVPTVFWKLNTNPPSSCSNPHLTSSLHQTPYPSDK*D 456
LQ P+ F L KQ+ FWK NTNP C++ LTS L +P *D
Sbjct: 579 LQHPSQFSLHKQKPHALRAFWKANTNPHPFCTDLCLTSCLQ*ILWPWAS*D 427
Score = 42.8 bits (87), Expect(3) = 4e-021
Identities = 22/49 (44%), Positives = 29/49 (59%)
Frame = +1 / +2
Query: 463 LSEG*GV**RLLVR*GLLQEEGGLVFSFQNTVGTRSSCFCSKNRAGRCN 609
L++G + *R LVR +Q+ GLVF+FQN C CS+N G CN
Sbjct: 434 LAQGQSIY*RQLVRQRSVQKG*GLVFAFQNARKA*GFCLCSENWDGCCN 580
Score = 42.8 bits (87), Expect(3) = 4e-021
Identities = 18/29 (62%), Positives = 20/29 (68%)
Frame = +1 / +1
Query: 184 ECPSQGAGRS*GKVAASQG*SDGLRQHCI 270
EC SQGA R GK A +Q * GLRQHC+
Sbjct: 154 ECSSQGARRCWGKAATAQR*PAGLRQHCV 240
Score = 30.4 bits (60), Expect(2) = 6e-029
Identities = 12/23 (52%), Positives = 14/23 (60%)
Frame = -3 / -3
Query: 613 NSYNVQPCFCCKSKSFSFRQCFG 545
NSYN+ P F C SKS + FG
Sbjct: 584 NSYNIHPSFRCISKSLTLCARFG 516
>gb|BE215014.1|BE215014 HV_CEb0005I17f Hordeum vulgare seedling green leaf EST library
HVcDNA0005 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEb0005I17f, mRNA sequence
Length = 622
Score = 212 bits (458), Expect(2) = 6e-071
Identities = 94/116 (81%), Positives = 99/116 (85%)
Frame = +2 / +3
Query: 65 RKSVCVTGAGGFVASELVKLLLSRGQYAVRGTVRDPGASKNAHLKVLEGAEERLQLLKAD 244
R VCVTGAGGFVAS LVKLLLS+ Y VRGTVRDPG +KNAHLK LEGA ERLQLL AD
Sbjct: 75 RSVVCVTGAGGFVASWLVKLLLSKAHYTVRGTVRDPGNAKNAHLKALEGAGERLQLLSAD 254
Query: 245 LMDYDSIASAVAGCEGVFHVASPVLSHRPSNPEVEVIAPAVTGTTNVLKACYEAKV 412
L+DYDSIASAVAGCEGVFHVASPV S R +NPE E IAPAVTGT NVLKAC +AKV
Sbjct: 255 LLDYDSIASAVAGCEGVFHVASPVPSGRSTNPEEEGIAPAVTGTLNVLKACNQAKV 422
Score = 183 bits (394), Expect(2) = 5e-049
Identities = 88/125 (70%), Positives = 92/125 (73%)
Frame = -1 / -1
Query: 447 TAPHEDTTTTRLTFAS*QAFNTLVVPVTAGAMTSTSGLEGRWERTGLATWKTPSQPATAD 268
T H LTFA QAFNT VPVTAGA+ S+SGL E TGLAT KTPSQPATAD
Sbjct: 457 TQQHMKPLCNSLTFAWLQAFNTFSVPVTAGAIPSSSGLVDLPEGTGLAT*KTPSQPATAD 278
Query: 267 AMLS*SIRSALRSCNLSSAPSSTLRWAFLLAPGSRTVPRTAYWPRERRSFTSSDATKPPA 88
AMLS*S RSAL SC+LS APSS LR AFL PGSRTVPRT W ERRS TS +ATKPPA
Sbjct: 277 AMLS*SSRSALSSCSLSPAPSSALR*AFLALPGSRTVPRTV*WALERRSLTSHEATKPPA 98
Query: 87 PVTHT 73
PVTHT
Sbjct: 97 PVTHT 83
Score = 150 bits (323), Expect(2) = 4e-039
Identities = 70/117 (59%), Positives = 81/117 (69%)
Frame = -3 / -3
Query: 409 FCLIASL*HIGCTCYSGSYDLHLRVGGSMGKDRASYMEDTLTAGNC*CNAVVVHQISLEK 230
FCL+ASL HI C CYS Y LRVG S +DRAS M+D LTA N NAVVV Q+S E+
Sbjct: 419 FCLVASLQHIQCACYSRGYTFFLRVGRSTRRDRASNMKDALTASNRRRNAVVVQQVSAEQ 240
Query: 229 LQPFLSSFQHLEMGILASTRVAHGAADRVLAPGEEELHQLRRDEAASAGHAHALPHR 59
LQPF S+F LEM IL+ T +AHGAAD V+ GEEEL + DEA+ AGHAH P R
Sbjct: 239 LQPFPSTF*RLEMSILSITGIAHGAADSVVGLGEEELDEP*GDEASCAGHAHNAPLR 69
Score = 101 bits (216), Expect(2) = 6e-026
Identities = 56/90 (62%), Positives = 61/90 (67%)
Frame = +3 / +1
Query: 144 TRSAAPCATLVLARMPISRCWKELRKGCSFSRLI*WTTTALHQQLPAVRVSSM*LALSFP 323
T SAAPCA V+ RM ISR K L KGCS S L WTTTAL ++L AVR S M LALS
Sbjct: 154 TLSAAPCAIPVMLRMLISRR*KVLGKGCSCSALTCWTTTALRRRLLAVRASFMLLALSLL 333
Query: 324 IDPPTLRWRS*LPL*QVQPMC*RLAMRQKL 413
+D PTLR + * L*Q MC*RLA RQKL
Sbjct: 334 VDRPTLRKKV*PLL*QAH*MC*RLATRQKL 423
Score = 76.2 bits (160), Expect(2) = 6e-071
Identities = 28/50 (56%), Positives = 36/50 (72%)
Frame = +2 / +3
Query: 455 NPIYPKGKVFDEDCWSDEDYCRKKEDWYLVSKTLSEREALAFAAKTGLDV 604
NP +PKGKVF ED W+DED C+K EDWYL+SKT ++R +TG+ V
Sbjct: 462 NPNWPKGKVFTEDSWADEDLCQKGEDWYLLSKTPAKRGGFCLCHETGMGV 611
Score = 36.3 bits (73), Expect(2) = 6e-026
Identities = 18/48 (37%), Positives = 23/48 (47%)
Frame = +3 / +1
Query: 471 RVRCLMKTAGQMRITAXXXXXXXXFPKHCRNEKLLLLQQKQGWTL*LF 614
R + L+KTAGQ RI A FPK ++ + K GW LF
Sbjct: 478 RAKYLLKTAGQTRICAKRVRIGICFPKPPQSGEAFAYATKLGWVFELF 621
Score = 32.2 bits (64), Expect(2) = 5e-049
Identities = 16/40 (40%), Positives = 20/40 (50%)
Frame = -2 / -2
Query: 608 LQRPALFLLQKQELLVPTVFWKLNTNPPSSCSNPHLTSSL 489
L+ P+ F + L FWK NTNP +NP L S L
Sbjct: 615 LKHPSQFRGISKSLPALRGFWKANTNPHPFGTNPRLPSCL 496
Score = 31.3 bits (62), Expect(2) = 4e-039
Identities = 17/50 (34%), Positives = 20/50 (40%)
Frame = -1 / -1
Query: 603 TSSPVFAAKARASRSDSVLETKYXXXXXXXXXXXXXXXXSNTLPFG*IGL 454
T PV K + R VLE+KY NTLP G +GL
Sbjct: 610 TPIPVSWHKQKPPRFAGVLESKYQSSPFWHKSSSAQLSSVNTLPLGQLGL 461
>gb|CA013420.1|CA013420 HT08G10r HT Hordeum vulgare subsp. vulgare cDNA clone HT08G10
5-PRIME, mRNA sequence
Length = 535
Score = 244 bits (527), Expect(2) = 3e-068
Identities = 98/151 (64%), Positives = 123/151 (81%)
Frame = +2 / +2
Query: 233 LKADLMDYDSIASAVAGCEGVFHVASPVLSHRPSNPEVEVIAPAVTGTTNVLKACYEAKV 412
+KADL+DY S+A+A+AGC+ VFHVA PVL++ NPE ++IAPAVTGT NVLKAC EAKV
Sbjct: 80 VKADLLDYGSMAAAIAGCDVVFHVACPVLANHIPNPEADLIAPAVTGTMNVLKACSEAKV 259
Query: 413 RRVVVVSSCGAVYANPIYPKGKVFDEDCWSDEDYCRKKEDWYLVSKTLSEREALAFAAKT 592
+RVV+VSS AV NP +P+GK DEDCWSD DYCR E+WY +SKTL+E +A +A ++
Sbjct: 260 KRVVMVSSVAAVMTNPSWPEGKPMDEDCWSDVDYCRTTENWYNLSKTLAELQAFDYAKRS 439
Query: 593 GLDVVTVCPSLVFGPLMQPTVNLSSEMILKY 685
GLDVVTVCPSLV GPL+QPTVN SS +I+ +
Sbjct: 440 GLDVVTVCPSLVIGPLLQPTVNASSSVIVDF 532
Score = 103 bits (220), Expect(3) = 1e-038
Identities = 52/81 (64%), Positives = 55/81 (67%)
Frame = -1 / -2
Query: 477 LPFG*IGLAYTAPHEDTTTTRLTFAS*QAFNTLVVPVTAGAMTSTSGLEGRWERTGLATW 298
LP G +G TA EDT TT LT AS QAF T +VPVTAGA+ S SGL RTG ATW
Sbjct: 324 LPSGQLGFVMTAATEDTITTLLTLASEQAFRTFIVPVTAGAIKSASGLGMWLARTGQATW 145
Query: 297 KTPSQPATADAMLS*SIRSAL 235
KT SQPA A AML *S RSAL
Sbjct: 144 KTTSQPAMAAAMLP*SSRSAL 82
Score = 62.9 bits (131), Expect(3) = 1e-038
Identities = 29/44 (65%), Positives = 33/44 (75%)
Frame = -1 / -2
Query: 666 LLKFTVGCIKGPNTNDGQTVTTSSPVFAAKARASRSDSVLETKY 535
LL FTVGC KGP T+DGQTVTTSSP+ A ++A S SVLE Y
Sbjct: 513 LLAFTVGCSKGPITSDGQTVTTSSPLLFA*SKA*SSASVLERLY 382
Score = 35.4 bits (71), Expect(2) = 3e-068
Identities = 14/22 (63%), Positives = 18/22 (81%)
Frame = +2 / +3
Query: 173 GASKNAHLKVLEGAEERLQLLK 238
G +KNAHL L+GA ERL+LL+
Sbjct: 21 GDAKNAHLPALDGAAERLRLLR 86
Score = 32.2 bits (64), Expect(3) = 1e-038
Identities = 15/26 (57%), Positives = 18/26 (69%)
Frame = -1 / -1
Query: 237 LRSCNLSSAPSSTLRWAFLLAPGSRT 160
L S +LS+APSS R AFL +P RT
Sbjct: 85 LNSRSLSAAPSSAGRCAFLASPSGRT 8
>gb|BM369883.2|BM369883 EBem07_SQ004_O04_R embryo, 28 DPA, no treatment, cv Optic, EBem07
Hordeum vulgare subsp. vulgare cDNA clone
EBem07_SQ004_O04 5', mRNA sequence
Length = 432
Score = 255 bits (551), Expect = 4e-067
Identities = 112/142 (78%), Positives = 120/142 (84%)
Frame = +2 / +1
Query: 65 RKSVCVTGAGGFVASELVKLLLSRGQYAVRGTVRDPGASKNAHLKVLEGAEERLQLLKAD 244
R VCVTGA GFVAS LVKLLLS+ Y VRGTVRDPG +KNAHLK LE A ERLQLL AD
Sbjct: 7 RSVVCVTGARGFVASWLVKLLLSKAHYTVRGTVRDPGNAKNAHLKALESAGERLQLLSAD 186
Query: 245 LMDYDSIASAVAGCEGVFHVASPVLSHRPSNPEVEVIAPAVTGTTNVLKACYEAKVRRVV 424
L+DYDSIASAVAGCEGVFHVASPV S R +NPE EVIAPAVTGT NVLKAC EAKV+RVV
Sbjct: 187 LLDYDSIASAVAGCEGVFHVASPVPSGRSTNPEEEVIAPAVTGTLNVLKACNEAKVKRVV 366
Query: 425 VVSSCGAVYANPIYPKGKVFDE 490
+VSSC AV+ NP +PKGKVF E
Sbjct: 367 IVSSCAAVFNNPNWPKGKVFTE 432
Score = 221 bits (477), Expect = 6e-057
Identities = 103/137 (75%), Positives = 108/137 (78%)
Frame = -1 / -2
Query: 483 NTLPFG*IGLAYTAPHEDTTTTRLTFAS*QAFNTLVVPVTAGAMTSTSGLEGRWERTGLA 304
NTLP G +GL TA HEDT TTRLTFAS QAFNT VPVTAGA+TS+SGL E TGLA
Sbjct: 425 NTLPLGQLGLLNTAAHEDTMTTRLTFASLQAFNTFSVPVTAGAITSSSGLVDLPEGTGLA 246
Query: 303 TWKTPSQPATADAMLS*SIRSALRSCNLSSAPSSTLRWAFLLAPGSRTVPRTAYWPRERR 124
TWKTPSQPATADAMLS*S RSAL SC+LS A SS LR AFL PGSRTVPRT W ERR
Sbjct: 245 TWKTPSQPATADAMLS*SSRSALSSCSLSPALSSALR*AFLALPGSRTVPRTV*WALERR 66
Query: 123 SFTSSDATKPPAPVTHT 73
S TS +ATKP APVTHT
Sbjct: 65 SLTSHEATKPLAPVTHT 15
Score = 149 bits (321), Expect = 2e-035
Identities = 69/117 (58%), Positives = 80/117 (68%)
Frame = -3 / -1
Query: 409 FCLIASL*HIGCTCYSGSYDLHLRVGGSMGKDRASYMEDTLTAGNC*CNAVVVHQISLEK 230
FCL+AS HI C CYS Y+ LRVG S +DRAS MED TA N NAVVV Q+S E+
Sbjct: 351 FCLVASFQHIQCACYSRGYNFFLRVGRSTRRDRASNMEDAFTASNRRRNAVVVQQVSAEQ 172
Query: 229 LQPFLSSFQHLEMGILASTRVAHGAADRVLAPGEEELHQLRRDEAASAGHAHALPHR 59
LQPF S+F LEM IL+ T +AHGAAD V+ GEEEL + DEA+ AGHAH P R
Sbjct: 171 LQPFPSTF*RLEMSILSITGIAHGAADSVVGLGEEELDEP*GDEASCAGHAHNAPLR 1
Score = 122 bits (262), Expect = 3e-027
Identities = 67/115 (58%), Positives = 76/115 (66%)
Frame = +3 / +2
Query: 144 TRSAAPCATLVLARMPISRCWKELRKGCSFSRLI*WTTTALHQQLPAVRVSSM*LALSFP 323
T SAAPCA V+ RM ISR K L KGCS S L WTTTAL ++L AV+ SSM LALS
Sbjct: 86 TLSAAPCAIPVMLRMLISRR*KVLGKGCSCSALTCWTTTALRRRLLAVKASSMLLALSLL 265
Query: 324 IDPPTLRWRS*LPL*QVQPMC*RLAMRQKLGELWWCLHVELCMLILFIRRVRCLM 488
+D PTLR + * L*Q MC*+LA RQKL EL CLHV LC IL R + L+
Sbjct: 266 VDRPTLRKKL*PLL*QAH*MC*KLATRQKLSELS*CLHVLLCSTILTGPRAKYLL 430
Score = 111 bits (237), Expect = 8e-024
Identities = 58/97 (59%), Positives = 63/97 (64%)
Frame = -2 / -3
Query: 473 PSDK*D*HTQLHMKTPPQLA*LLPHSKPLTHWLYLLQREL*PPPQGWRVDGKGQG*LHGR 294
P *D TQ HMKT QLA*LLP K TH + LLQ+ L* PQGW + KGQG* HGR
Sbjct: 415 PWAS*DC*TQQHMKTL*QLA*LLPRCKLSTHSVCLLQQGL*LLPQGWSIYQKGQG*QHGR 236
Query: 293 HPHSRQLLMQCCRSPSDQP*EAATFPQLLPAP*DGHS 183
HS+Q QCCRSP+ Q * AA FPQ AP*D HS
Sbjct: 235 RLHSQQPPTQCCRSPAGQR*AAAAFPQHFLAP*DEHS 125
>gb|CB879567.1|CB879567 HP02M04w HP Hordeum vulgare subsp. vulgare cDNA clone HP02M04
3-PRIME, mRNA sequence
Length = 665
Score = 195 bits (420), Expect(2) = 3e-066
Identities = 77/108 (71%), Positives = 96/108 (88%)
Frame = +2 / -3
Query: 698 ETVENVLSNMVDIRDVADALLLTYEKPEASGRYICSSHAIKISDMINILKTMYPSYPYPK 877
+TVEN L N+VD+RDVADALLL YEKPEASGRYICSS +K+SDMI++LKT+YP+Y YPK
Sbjct: 513 DTVENKLRNLVDVRDVADALLLAYEKPEASGRYICSSVPVKVSDMISVLKTLYPTYTYPK 334
Query: 878 NFVEDDVNSVYSSEKLQKLGWTFKPIEESLRDTVESYKAFGILN*TSN 1021
NFVE + N++YSSEKLQKLGW F+P+E++L D+VESY+A G+LN* SN
Sbjct: 333 NFVEVEGNTIYSSEKLQKLGWIFRPLEKTLGDSVESYRASGVLN*ASN 190
Score = 160 bits (345), Expect(2) = 6e-052
Identities = 68/109 (62%), Positives = 83/109 (76%)
Frame = -3 / +1
Query: 1024 LVGCSIQDAKCLVGFNSVTEGFLYRLEGPPQLLQFLRAVYRVDIIFHKIFGIRVRRIHGL 845
LVGCS+QDA+C VGF++++EG L R E PP LL+FLRA+ + F+K+FGI V RI GL
Sbjct: 187 LVGCSVQDARCSVGFHAISEGLL*RPEDPP*LLKFLRAINSISFDFYKVFGISVCRI*GL 366
Query: 844 QYVYHIRNFYCM*TADVSSRRFWLFVSQKKSISNITNIHHITEYIFNSL 698
QY YHIR+FY *TADV SRR W F+ Q KSI NITNIH I E+IF S+
Sbjct: 367 QYAYHIRDFYWY*TADVPSRRLWFFICQ*KSIGNITNIH*IPEFIFYSI 513
Score = 116 bits (247), Expect(2) = 5e-034
Identities = 62/106 (58%), Positives = 67/106 (63%)
Frame = +3 / -1
Query: 708 KMYSVIWWIFVXXXXXXXXXTKSQKRLDDTSAVHMQ*KFLI**TY*RPCIRLTLIPKILW 887
K+ S I W+FV K+Q+RLD TSAV Q*K LI** Y*RP IR TLIPK L
Sbjct: 503 KINSGI*WMFVMLPMLFYWHMKNQRRLDGTSAVQYQ*KSLI**AY*RPYIRHTLIPKTL* 324
Query: 888 KMMSTLYTALRNCRSWGGPSSL*RNPSVTLLNPTRHLAS*IEHPTR 1025
K L+ A RN RS GG S L*R PS NPT HLAS* EHPTR
Sbjct: 323 KSKEILFIARRNFRS*GGSSGL*RRPSEIAWNPTEHLAS*TEHPTR 186
Score = 78.0 bits (164), Expect(2) = 3e-066
Identities = 31/44 (70%), Positives = 36/44 (81%)
Frame = +2 / -3
Query: 560 EREALAFAAKTGLDVVTVCPSLVFGPLMQPTVNLSSEMILKYFK 691
EREA A+A KTGLDVVT+CPSLV GPLMQ TVN SS +++ Y K
Sbjct: 654 EREAFAYAEKTGLDVVTICPSLVIGPLMQSTVNTSSNILINYLK 523
Score = 77.6 bits (163), Expect(3) = 1e-025
Identities = 35/65 (53%), Positives = 45/65 (69%)
Frame = +1 / -2
Query: 772 KARSVWTIHLQFTCNKNF*YDKHTEDHVSVLPLSQKFCGR*CQLCIQL*ETAEAGVDLQA 951
K R VWT+HLQF+ +K+ *YDK TED +S + LSQK C + + L ET+EA VDLQA
Sbjct: 439 KTRGVWTVHLQFSTSKSL*YDKRTEDLISDIHLSQKLCRSRRKYYL*LGETSEARVDLQA 260
Query: 952 YRGIP 966
+R P
Sbjct: 259 FREDP 245
Score = 73.5 bits (154), Expect(3) = 8e-035
Identities = 36/64 (56%), Positives = 36/64 (56%)
Frame = -1 / +2
Query: 882 KFLG*G*DGYMVFSMFIISEIFIACELQMYRPDASGFXXXXXXXXXXXXXXXILLSTFST 703
KFLG* GY VFS IISE F ELQMYRPDASGF LS FST
Sbjct: 329 KFLG*VYVGYKVFSTLIISETFTGTELQMYRPDASGFSYANRRASATSRTSTRFLSLFST 508
Query: 702 VSRS 691
VSRS
Sbjct: 509 VSRS 520
Score = 64.3 bits (134), Expect(2) = 6e-052
Identities = 30/44 (68%), Positives = 34/44 (77%)
Frame = -1 / +2
Query: 690 LKYLRIISLLKFTVGCIKGPNTNDGQTVTTSSPVFAAKARASRS 559
L+ L I LL FTV CIKGP TNDG VTTS+PVF+A A+ASRS
Sbjct: 524 LR*LMRILLLVFTVDCIKGPITNDGHIVTTSNPVFSA*AKASRS 655
Score = 62.0 bits (129), Expect(3) = 8e-035
Identities = 24/47 (51%), Positives = 30/47 (63%)
Frame = -3 / +1
Query: 691 FEIFKDHFAAQIYCRLHQGSKY**RTNSYNVQPCFCCKSKSFSFRQC 551
FEI ++ A+IYCRLHQG+ Y SYN+QP F C SKS + C
Sbjct: 523 FEIINENITARIYCRLHQGANYQRWAYSYNIQPSFFCISKSLTLSSC 663
Score = 50.6 bits (104), Expect(3) = 8e-035
Identities = 22/31 (70%), Positives = 25/31 (80%)
Frame = -1 / +2
Query: 1020 LDVQFRMPNAL*DSTVSRRDSSIGLKVHPSF 928
LD QFR P+AL*DST+S R S GLK+HPSF
Sbjct: 191 LDAQFRTPDAL*DSTLSPRVFSKGLKIHPSF 283
Score = 49.2 bits (101), Expect(2) = 5e-034
Identities = 19/40 (47%), Positives = 24/40 (60%)
Frame = +1 / -2
Query: 574 CFCSKNRAGRCNCLSVISIWTLDAAYSKFEQRNDP*IFQR 693
C C KN G CN + ++ W LDA YSK+EQ *+ QR
Sbjct: 640 CLCRKNWVGCCNYMPIVGNWPLDAVYSKYEQ*YSH*LSQR 521
Score = 48.3 bits (99), Expect(3) = 1e-025
Identities = 27/53 (50%), Positives = 35/53 (66%)
Frame = +3 / -1
Query: 549 KHCRNEKLLLLQQKQGWTL*LFVRH*YLDP*CSLQ*I*AAK*SLNISKISRLL 707
+H + +LLL+Q+K GW L*L+ L P*CSLQ*I A SL ISK + +L
Sbjct: 665 RHEESVRLLLMQKKLGWML*LYAHRW*LAP*CSLQ*IRAVIFSLIISKENVIL 507
Score = 29.0 bits (57), Expect(3) = 1e-025
Identities = 11/15 (73%), Positives = 12/15 (80%)
Frame = +1 / -2
Query: 982 ILQGIWHPELNIQLG 1026
ILQ IW PEL+IQ G
Sbjct: 229 ILQSIWRPELSIQPG 185
>gb|CB876883.1|CB876883 HP02M04T HP Hordeum vulgare subsp. vulgare cDNA clone HP02M04
5-PRIME, mRNA sequence
Length = 633
Score = 195 bits (420), Expect(2) = 3e-066
Identities = 77/108 (71%), Positives = 96/108 (88%)
Frame = +2 / +3
Query: 698 ETVENVLSNMVDIRDVADALLLTYEKPEASGRYICSSHAIKISDMINILKTMYPSYPYPK 877
+TVEN L N+VD+RDVADALLL YEKPEASGRYICSS +K+SDMI++LKT+YP+Y YPK
Sbjct: 153 DTVENKLRNLVDVRDVADALLLAYEKPEASGRYICSSVPVKVSDMISVLKTLYPTYTYPK 332
Query: 878 NFVEDDVNSVYSSEKLQKLGWTFKPIEESLRDTVESYKAFGILN*TSN 1021
NFVE + N++YSSEKLQKLGW F+P+E++L D+VESY+A G+LN* SN
Sbjct: 333 NFVEVEGNTIYSSEKLQKLGWIFRPLEKTLGDSVESYRASGVLN*ASN 476
Score = 160 bits (345), Expect(2) = 6e-052
Identities = 68/109 (62%), Positives = 83/109 (76%)
Frame = -3 / -2
Query: 1024 LVGCSIQDAKCLVGFNSVTEGFLYRLEGPPQLLQFLRAVYRVDIIFHKIFGIRVRRIHGL 845
LVGCS+QDA+C VGF++++EG L R E PP LL+FLRA+ + F+K+FGI V RI GL
Sbjct: 479 LVGCSVQDARCSVGFHAISEGLL*RPEDPP*LLKFLRAINSISFDFYKVFGISVCRI*GL 300
Query: 844 QYVYHIRNFYCM*TADVSSRRFWLFVSQKKSISNITNIHHITEYIFNSL 698
QY YHIR+FY *TADV SRR W F+ Q KSI NITNIH I E+IF S+
Sbjct: 299 QYAYHIRDFYWY*TADVPSRRLWFFICQ*KSIGNITNIH*IPEFIFYSI 153
Score = 113 bits (242), Expect(2) = 2e-033
Identities = 61/105 (58%), Positives = 66/105 (62%)
Frame = +3 / +1
Query: 708 KMYSVIWWIFVXXXXXXXXXTKSQKRLDDTSAVHMQ*KFLI**TY*RPCIRLTLIPKILW 887
K+ S I W+FV K+Q+RLD TSAV Q*K LI** Y*RP IR TLIPK L
Sbjct: 163 KINSGI*WMFVMLPMLFYWHMKNQRRLDGTSAVQYQ*KSLI**AY*RPYIRHTLIPKTL* 342
Query: 888 KMMSTLYTALRNCRSWGGPSSL*RNPSVTLLNPTRHLAS*IEHPT 1022
K L+ A RN RS GG S L*R PS NPT HLAS* EHPT
Sbjct: 343 KSKEILFIARRNFRS*GGSSGL*RRPSEIAWNPTEHLAS*TEHPT 477
Score = 78.0 bits (164), Expect(2) = 3e-066
Identities = 31/44 (70%), Positives = 36/44 (81%)
Frame = +2 / +3
Query: 560 EREALAFAAKTGLDVVTVCPSLVFGPLMQPTVNLSSEMILKYFK 691
EREA A+A KTGLDVVT+CPSLV GPLMQ TVN SS +++ Y K
Sbjct: 12 EREAFAYAEKTGLDVVTICPSLVIGPLMQSTVNTSSNILINYLK 143
Score = 77.6 bits (163), Expect(3) = 3e-025
Identities = 35/65 (53%), Positives = 45/65 (69%)
Frame = +1 / +2
Query: 772 KARSVWTIHLQFTCNKNF*YDKHTEDHVSVLPLSQKFCGR*CQLCIQL*ETAEAGVDLQA 951
K R VWT+HLQF+ +K+ *YDK TED +S + LSQK C + + L ET+EA VDLQA
Sbjct: 227 KTRGVWTVHLQFSTSKSL*YDKRTEDLISDIHLSQKLCRSRRKYYL*LGETSEARVDLQA 406
Query: 952 YRGIP 966
+R P
Sbjct: 407 FREDP 421
Score = 73.5 bits (154), Expect(3) = 8e-035
Identities = 36/64 (56%), Positives = 36/64 (56%)
Frame = -1 / -3
Query: 882 KFLG*G*DGYMVFSMFIISEIFIACELQMYRPDASGFXXXXXXXXXXXXXXXILLSTFST 703
KFLG* GY VFS IISE F ELQMYRPDASGF LS FST
Sbjct: 337 KFLG*VYVGYKVFSTLIISETFTGTELQMYRPDASGFSYANRRASATSRTSTRFLSLFST 158
Query: 702 VSRS 691
VSRS
Sbjct: 157 VSRS 146
Score = 64.3 bits (134), Expect(2) = 6e-052
Identities = 30/44 (68%), Positives = 34/44 (77%)
Frame = -1 / -3
Query: 690 LKYLRIISLLKFTVGCIKGPNTNDGQTVTTSSPVFAAKARASRS 559
L+ L I LL FTV CIKGP TNDG VTTS+PVF+A A+ASRS
Sbjct: 142 LR*LMRILLLVFTVDCIKGPITNDGHIVTTSNPVFSA*AKASRS 11
Score = 62.0 bits (129), Expect(3) = 8e-035
Identities = 24/47 (51%), Positives = 30/47 (63%)
Frame = -3 / -2
Query: 691 FEIFKDHFAAQIYCRLHQGSKY**RTNSYNVQPCFCCKSKSFSFRQC 551
FEI ++ A+IYCRLHQG+ Y SYN+QP F C SKS + C
Sbjct: 143 FEIINENITARIYCRLHQGANYQRWAYSYNIQPSFFCISKSLTLSSC 3
Score = 50.6 bits (104), Expect(3) = 8e-035
Identities = 22/31 (70%), Positives = 25/31 (80%)
Frame = -1 / -3
Query: 1020 LDVQFRMPNAL*DSTVSRRDSSIGLKVHPSF 928
LD QFR P+AL*DST+S R S GLK+HPSF
Sbjct: 475 LDAQFRTPDAL*DSTLSPRVFSKGLKIHPSF 383
Score = 49.2 bits (101), Expect(2) = 2e-033
Identities = 19/40 (47%), Positives = 24/40 (60%)
Frame = +1 / +2
Query: 574 CFCSKNRAGRCNCLSVISIWTLDAAYSKFEQRNDP*IFQR 693
C C KN G CN + ++ W LDA YSK+EQ *+ QR
Sbjct: 26 CLCRKNWVGCCNYMPIVGNWPLDAVYSKYEQ*YSH*LSQR 145
Score = 48.3 bits (99), Expect(3) = 3e-025
Identities = 27/53 (50%), Positives = 35/53 (66%)
Frame = +3 / +1
Query: 549 KHCRNEKLLLLQQKQGWTL*LFVRH*YLDP*CSLQ*I*AAK*SLNISKISRLL 707
+H + +LLL+Q+K GW L*L+ L P*CSLQ*I A SL ISK + +L
Sbjct: 1 RHEESVRLLLMQKKLGWML*LYAHRW*LAP*CSLQ*IRAVIFSLIISKENVIL 159
Score = 27.6 bits (54), Expect(3) = 3e-025
Identities = 10/13 (76%), Positives = 11/13 (84%)
Frame = +1 / +2
Query: 982 ILQGIWHPELNIQ 1020
ILQ IW PEL+IQ
Sbjct: 437 ILQSIWRPELSIQ 475
>gb|CA023572.1|CA023572 HZ46L02r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ46L02
5-PRIME, mRNA sequence
Length = 421
Score = 236 bits (510), Expect(2) = 2e-064
Identities = 100/126 (79%), Positives = 108/126 (85%)
Frame = +2 / +1
Query: 134 RGQYAVRGTVRDPGASKNAHLKVLEGAEERLQLLKADLMDYDSIASAVAGCEGVFHVASP 313
+ Y VRGTVRDPG +KNAHLK LEGA ERLQLL ADL+DYDSIASAVAGCEGVFHVASP
Sbjct: 43 QAHYTVRGTVRDPGNAKNAHLKALEGAGERLQLLSADLLDYDSIASAVAGCEGVFHVASP 222
Query: 314 VLSHRPSNPEVEVIAPAVTGTTNVLKACYEAKVRRVVVVSSCGAVYANPIYPKGKVFDED 493
V S R +NPE EVIAPAVTGT NVLKAC EAKV+RVV+VSSC AV+ NP +PKGKVF ED
Sbjct: 223 VPSGRSTNPEEEVIAPAVTGTLNVLKACNEAKVKRVVIVSSCAAVFNNPNWPKGKVFTED 402
Query: 494 CWSDED 511
WSDED
Sbjct: 403 SWSDED 420
Score = 190 bits (410), Expect(2) = 3e-050
Identities = 88/115 (76%), Positives = 92/115 (80%)
Frame = -1 / -3
Query: 483 NTLPFG*IGLAYTAPHEDTTTTRLTFAS*QAFNTLVVPVTAGAMTSTSGLEGRWERTGLA 304
NTLP G +GL TA HEDT TTRLTFAS QAFNT VPVTAGA+TS+SGL E TGLA
Sbjct: 392 NTLPLGQLGLLNTAAHEDTMTTRLTFASLQAFNTFSVPVTAGAITSSSGLVDLPEGTGLA 213
Query: 303 TWKTPSQPATADAMLS*SIRSALRSCNLSSAPSSTLRWAFLLAPGSRTVPRTAYW 139
TWKTPSQPATADAMLS*S RSAL SC+LS APSS LR AFL PGSRTVPRT W
Sbjct: 212 TWKTPSQPATADAMLS*SSRSALSSCSLSPAPSSALR*AFLALPGSRTVPRTV*W 48
Score = 140 bits (301), Expect = 1e-032
Identities = 76/123 (61%), Positives = 83/123 (67%)
Frame = +3 / +2
Query: 144 TRSAAPCATLVLARMPISRCWKELRKGCSFSRLI*WTTTALHQQLPAVRVSSM*LALSFP 323
T SAAPCA V+ RM ISR K L KGCS S L WTTTAL ++L AVR SSM LALS
Sbjct: 53 TLSAAPCAIPVMLRMLISRR*KVLGKGCSCSALTCWTTTALRRRLLAVRASSMLLALSLL 232
Query: 324 IDPPTLRWRS*LPL*QVQPMC*RLAMRQKLGELWWCLHVELCMLILFIRRVRCLMKTAGQ 503
+D PTLR + * L*Q MC*RLA RQKL EL CLHV LC IL R + L+KTAGQ
Sbjct: 233 VDRPTLRKKL*PLL*QAH*MC*RLATRQKLSELS*CLHVLLCSTILTGPRAKYLLKTAGQ 412
Query: 504 MRI 512
RI
Sbjct: 413 TRI 421
Score = 128 bits (275), Expect = 5e-029
Identities = 66/110 (60%), Positives = 72/110 (65%)
Frame = -2 / -1
Query: 512 NPHLTSSLHQTPYPSDK*D*HTQLHMKTPPQLA*LLPHSKPLTHWLYLLQREL*PPPQGW 333
+P LTS L P *D TQ HMKT QLA*LLP KP TH + LLQ+ L* PQGW
Sbjct: 421 DPRLTSCLQ*ILCPWAS*DC*TQQHMKTL*QLA*LLPRCKPSTHSVCLLQQGL*LLPQGW 242
Query: 332 RVDGKGQG*LHGRHPHSRQLLMQCCRSPSDQP*EAATFPQLLPAP*DGHS 183
+ KGQG* HGR PHS+Q QCCRSP+ Q * AA FPQ L AP*D HS
Sbjct: 241 SIYQKGQG*QHGRRPHSQQPPTQCCRSPAGQR*AAAAFPQHLLAP*DEHS 92
Score = 123 bits (264), Expect = 2e-027
Identities = 56/90 (62%), Positives = 65/90 (72%)
Frame = -3 / -2
Query: 409 FCLIASL*HIGCTCYSGSYDLHLRVGGSMGKDRASYMEDTLTAGNC*CNAVVVHQISLEK 230
FCL+ASL HI C CYS Y+ LRVG S +DRAS MED LTA N NAVVV Q+S E+
Sbjct: 318 FCLVASLQHIQCACYSRGYNFFLRVGRSTRRDRASNMEDALTASNRRRNAVVVQQVSAEQ 139
Query: 229 LQPFLSSFQHLEMGILASTRVAHGAADRVL 140
LQPF S+F LEM IL+ T +AHGAAD V+
Sbjct: 138 LQPFPSTF*RLEMSILSITGIAHGAADSVV 49
Score = 30.9 bits (61), Expect(2) = 2e-064
Identities = 14/15 (93%), Positives = 14/15 (93%)
Frame = +2 / +2
Query: 92 GGFVASELVKLLLSR 136
GGFVAS LVKLLLSR
Sbjct: 2 GGFVASWLVKLLLSR 46
Score = 29.0 bits (57), Expect(2) = 3e-050
Identities = 11/14 (78%), Positives = 12/14 (85%)
Frame = -1 / -2
Query: 132 ERRSFTSSDATKPP 91
ERRS TS +ATKPP
Sbjct: 42 ERRSLTSHEATKPP 1
>gb|BG365391.1|BG365391 HVSMEi0002I06f Hordeum vulgare 20 DAP spike EST library HVcDNA0010
(20 DAP) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEi0002I06f, mRNA sequence
Length = 757
Score = 241 bits (521), Expect = 5e-063
Identities = 99/196 (50%), Positives = 137/196 (69%)
Frame = +2 / +1
Query: 92 GGFVASELVKLLLSRGQYAVRGTVRDPGASKNAHLKVLEGAEERLQLLKADLMDYDSIAS 271
GG + + LL YAV TVRDP K+ HLK ++ A E L L +AD++DYD++
Sbjct: 94 GGGFIASWLVKLLLSRGYAVNATVRDPSDPKSVHLKQMDEARENLHLFRADVLDYDTLTR 273
Query: 272 AVAGCEGVFHVASPVLSHRPSNPEVEVIAPAVTGTTNVLKACYEAKVRRVVVVSSCGAVY 451
A GCEGVFH+A+PV + +PE EV+APA GT+NVLKAC KV++V+ +SS AV
Sbjct: 274 AFEGCEGVFHLATPVPEDKIGDPESEVLAPAGKGTSNVLKACSAMKVQKVIGLSSTAAVD 453
Query: 452 ANPIYPKGKVFDEDCWSDEDYCRKKEDWYLVSKTLSEREALAFAAKTGLDVVTVCPSLVF 631
NP +P+ K+ DE CWSD+D+C+K EDW V+K ++E+ + ++ K GL+VVTVCP LVF
Sbjct: 454 FNPNWPQDKLKDESCWSDKDFCQKNEDWCSVAKIVAEQASFRYSEKNGLNVVTVCPPLVF 633
Query: 632 GPLMQPTVNLSSEMIL 679
GPL+QPTVN SS+ ++
Sbjct: 634 GPLVQPTVNTSSKFLI 681
Score = 138 bits (297), Expect(2) = 6e-038
Identities = 76/174 (43%), Positives = 92/174 (52%)
Frame = -1 / -3
Query: 666 LLKFTVGCIKGPNTNDGQTVTTSSPVFAAKARASRSDSVLETKYXXXXXXXXXXXXXXXX 487
LL FTVGC GP T GQTVTT +P F+ + + S ++L T++
Sbjct: 668 LLVFTVGCTNGPKTKGGQTVTTFNPFFSEYLKDACSATILATEHQSSFFWQKSLSDQQLS 489
Query: 486 SNTLPFG*IGLAYTAPHEDTTTTRLTFAS*QAFNTLVVPVTAGAMTSTSGLEGRWERTGL 307
S +L G GL TA +D T TF + QAF+T VP AGA TS SG TG+
Sbjct: 488 SLSLS*GQFGLKSTAAVDDKPITF*TFIAEQAFSTFEVPFPAGANTSDSGSPILSSGTGV 309
Query: 306 ATWKTPSQPATADAMLS*SIRSALRSCNLSSAPSSTLRWAFLLAPGSRTVPRTA 145
A WKTPS P+ A +S*S SAL C S A S LRW L + GSRTV TA
Sbjct: 308 ARWKTPSHPSNARVSVS*SSTSALNKCRFSRASSICLRWTLLGSLGSRTVALTA 147
Score = 39.6 bits (80), Expect(2) = 6e-038
Identities = 15/22 (68%), Positives = 16/22 (72%)
Frame = -1 / -3
Query: 138 PRERRSFTSSDATKPPAPVTHT 73
PRER S TS +A PP PVTHT
Sbjct: 143 PRERSSLTSHEAMNPPPPVTHT 78
>gb|CA019777.1|CA019777 HV13C06r HV Hordeum vulgare subsp. vulgare cDNA clone HV13C06
5-PRIME, mRNA sequence
Length = 495
Score = 206 bits (444), Expect(2) = 1e-060
Identities = 85/125 (68%), Positives = 102/125 (81%)
Frame = +2 / +1
Query: 140 QYAVRGTVRDPGASKNAHLKVLEGAEERLQLLKADLMDYDSIASAVAGCEGVFHVASPVL 319
+YAVRGTVRD G +KNAHL L+GA ERL+L KADL+DY S+A+A+AGC+ VFHVA PVL
Sbjct: 121 RYAVRGTVRDLGDAKNAHLPALDGAAERLRLFKADLLDYGSMAAAIAGCDVVFHVACPVL 300
Query: 320 SHRPSNPEVEVIAPAVTGTTNVLKACYEAKVRRVVVVSSCGAVYANPIYPKGKVFDEDCW 499
++ NPE ++IAPAVTGT NVLKAC EAKV+RVV+VSS AV NP +P+GK DEDCW
Sbjct: 301 ANHIPNPEADLIAPAVTGTMNVLKACSEAKVKRVVMVSSVAAVMTNPSWPEGKPMDEDCW 480
Query: 500 SDEDY 514
SD DY
Sbjct: 481 SDVDY 495
Score = 143 bits (307), Expect(2) = 3e-041
Identities = 72/111 (64%), Positives = 78/111 (70%)
Frame = -1 / -2
Query: 477 LPFG*IGLAYTAPHEDTTTTRLTFAS*QAFNTLVVPVTAGAMTSTSGLEGRWERTGLATW 298
LP G +G TA EDT TT LT AS QAF T +VPVTAGA+ S SGL RTG ATW
Sbjct: 458 LPSGQLGFVMTAATEDTITTLLTLASEQAFRTFIVPVTAGAIKSASGLGMWLARTGQATW 279
Query: 297 KTPSQPATADAMLS*SIRSALRSCNLSSAPSSTLRWAFLLAPGSRTVPRTA 145
KT SQPA A AML *S RSAL S +LS+APSS R AFL +P SRTVPRTA
Sbjct: 278 KTTSQPAMAAAMLP*SSRSALNSRSLSAAPSSAGRCAFLASPRSRTVPRTA 126
Score = 48.3 bits (99), Expect(2) = 1e-060
Identities = 23/32 (71%), Positives = 24/32 (75%)
Frame = +2 / +1
Query: 71 SVCVTGAGGFVASELVKLLLSRGQYAVRGTVR 166
+ CVTGAGGFVAS LVKLLLSRG R VR
Sbjct: 40 TACVTGAGGFVASWLVKLLLSRGGGGRRYAVR 135
Score = 46.0 bits (94), Expect(2) = 3e-041
Identities = 20/32 (62%), Positives = 22/32 (68%)
Frame = -1 / -2
Query: 165 RTVPRTAYWPRERRSFTSSDATKPPAPVTHTL 70
RT R PRER S TS +ATKPPAPVTH +
Sbjct: 134 RTA*RRPPPPRERSSLTSHEATKPPAPVTHAV 39
>gb|BJ452084.1|BJ452084 BJ452084 K. Sato unpublished cDNA library, cv. Akashinriki
vegetative stage leaves Hordeum vulgare subsp. vulgare
cDNA clone baak37l05 5', mRNA sequence
Length = 637
Score = 222 bits (479), Expect(2) = 2e-059
Identities = 91/181 (50%), Positives = 122/181 (67%)
Frame = +2 / +2
Query: 143 YAVRGTVRDPGASKNAHLKVLEGAEERLQLLKADLMDYDSIASAVAGCEGVFHVASPVLS 322
YAV TVRDP KNA L L+GA L+L KAD++DYD++ +A AGCEGVFHVA+PV
Sbjct: 17 YAVHATVRDPRDPKNAFLTELDGAPANLRLFKADVLDYDTVTAAFAGCEGVFHVATPVPD 196
Query: 323 HRPSNPEVEVIAPAVTGTTNVLKACYEAKVRRVVVVSSCGAVYANPIYPKGKVFDEDCWS 502
+ +P+ E++ PAV GT NVLKAC KV +++VVSS NP +P+ K+ DE CWS
Sbjct: 197 KKMVDPQKEMMEPAVKGTMNVLKACSATKVHKLIVVSSIATSCFNPDWPRDKIKDESCWS 376
Query: 503 DEDYCRKKEDWYLVSKTLSEREALAFAAKTGLDVVTVCPSLVFGPLMQPTVNLSSEMILK 682
D++ C++ E+WY ++KT +E AL + K GL VVT CP LV GPL+Q +S +L
Sbjct: 377 DKELCKQSENWYSLAKTEAEEMALEYGEKNGLHVVTFCPGLVLGPLLQHVAVNTSSKVLV 556
Query: 683 Y 685
Y
Sbjct: 557 Y 559
Score = 95.9 bits (203), Expect(2) = 8e-026
Identities = 50/105 (47%), Positives = 65/105 (61%)
Frame = -1 / -2
Query: 459 GLAYTAPHEDTTTTRLTFAS*QAFNTLVVPVTAGAMTSTSGLEGRWERTGLATWKTPSQP 280
GL ++TT + TF + QA +T +VP+TAG++ S G TG+ATWKTPSQP
Sbjct: 333 GLKQLVAMDETTMSL*TFVAEQALSTFMVPLTAGSIISFCGSTIFLSGTGVATWKTPSQP 154
Query: 279 ATADAMLS*SIRSALRSCNLSSAPSSTLRWAFLLAPGSRTVPRTA 145
A A +S*S SAL S + APSS++R AF + GSRTV TA
Sbjct: 153 AKAAVTVS*SSTSALNSRRFAGAPSSSVRNAFFGSRGSRTVAWTA 19
Score = 41.8 bits (85), Expect(2) = 8e-026
Identities = 19/48 (39%), Positives = 26/48 (54%)
Frame = -1 / -2
Query: 678 RIISLLKFTVGCIKGPNTNDGQTVTTSSPVFAAKARASRSDSVLETKY 535
R + L+ C +GP T GQ VTT +P F+ +RA S SV +Y
Sbjct: 552 RTLLLVLTATCCNRGPKTRPGQNVTTCNPFFSPYSRAISSASVFAREY 409
Score = 28.1 bits (55), Expect(2) = 2e-059
Identities = 11/20 (55%), Positives = 15/20 (75%)
Frame = +2 / +2
Query: 698 ETVENVLSNMVDIRDVADAL 757
+T+ N +VD+RDVADAL
Sbjct: 578 DTMNNKFFPIVDVRDVADAL 637
>gb|BU985911.1|BU985911 HF08P24r HF Hordeum vulgare subsp. vulgare cDNA clone HF08P24
5-PRIME, mRNA sequence
Length = 401
Score = 220 bits (474), Expect = 2e-056
Identities = 94/115 (81%), Positives = 102/115 (88%)
Frame = +2 / +2
Query: 65 RKSVCVTGAGGFVASELVKLLLSRGQYAVRGTVRDPGASKNAHLKVLEGAEERLQLLKAD 244
RK+VCVTGAGGF+AS LVKLLLS+G Y VRGTVRDPG +KNAHLK LEGA ERLQLL AD
Sbjct: 56 RKTVCVTGAGGFIASWLVKLLLSKGHYTVRGTVRDPGNAKNAHLKALEGAGERLQLLSAD 235
Query: 245 LMDYDSIASAVAGCEGVFHVASPVLSHRPSNPEVEVIAPAVTGTTNVLKACYEAK 409
L++YDSIASAVAGC+GVFHVASPV S R +NPE E IAPAVTGT NVLKACYEAK
Sbjct: 236 LLNYDSIASAVAGCDGVFHVASPVPSGRSTNPEEEAIAPAVTGTLNVLKACYEAK 400
Score = 185 bits (398), Expect = 5e-046
Identities = 86/114 (75%), Positives = 90/114 (78%)
Frame = -1 / -3
Query: 408 FAS*QAFNTLVVPVTAGAMTSTSGLEGRWERTGLATWKTPSQPATADAMLS*SIRSALRS 229
FAS*QAF T VPVTAGA+ S+SGL E TGLATWKTPSQPATADAMLS* RSAL S
Sbjct: 399 FAS*QAFKTFSVPVTAGAIASSSGLVDLPEGTGLATWKTPSQPATADAMLS*FSRSALSS 220
Query: 228 CNLSSAPSSTLRWAFLLAPGSRTVPRTAYWPRERRSFTSSDATKPPAPVTHTLF 67
CNLS APSS LR AFL PGSRTVPRT P ERRS TS +A KPPAPVTHT+F
Sbjct: 219 CNLSPAPSSALR*AFLALPGSRTVPRTV*CPLERRSLTSHEAMKPPAPVTHTVF 58
Score = 144 bits (309), Expect = 1e-033
Identities = 69/127 (54%), Positives = 84/127 (66%)
Frame = -3 / -2
Query: 409 FCLIASL*HIGCTCYSGSYDLHLRVGGSMGKDRASYMEDTLTAGNC*CNAVVVHQISLEK 230
F L+AS I C CYS Y LR+G S +DRAS MED +TA N * NAVVV Q+ E+
Sbjct: 400 FRLVASFQDIQCACYSRGYSFFLRIG*SARRDRASNMEDPITASNR*RNAVVVQQVGAEQ 221
Query: 229 LQPFLSSFQHLEMGILASTRVAHGAADRVLAPGEEELHQLRRDEAASAGHAHALPHRIHC 50
LQPF S+F L+M IL+ T ++HGAADRV++ GEEEL + R DEA+ A HAH LP R
Sbjct: 220 LQPFPSTF*CLKMSILSITGISHGAADRVVSLGEEELDEPRGDEASCASHAHGLPRRRRR 41
Query: 49 FRFEYSS 29
R SS
Sbjct: 40 RRHALSS 20
>gb|CA011608.1|CA011608 HT03A12r HT Hordeum vulgare subsp. vulgare cDNA clone HT03A12
5-PRIME, mRNA sequence
Length = 371
Score = 218 bits (470), Expect = 6e-056
Identities = 96/117 (82%), Positives = 101/117 (86%)
Frame = +2 / +1
Query: 65 RKSVCVTGAGGFVASELVKLLLSRGQYAVRGTVRDPGASKNAHLKVLEGAEERLQLLKAD 244
R VCVTGAGGFVAS LVKLLLS+ Y VRGTVRDPG +KNAHLK LEGA ERLQLL AD
Sbjct: 19 RSVVCVTGAGGFVASWLVKLLLSKAHYTVRGTVRDPGNAKNAHLKALEGAGERLQLLSAD 198
Query: 245 LMDYDSIASAVAGCEGVFHVASPVLSHRPSNPEVEVIAPAVTGTTNVLKACYEAKVR 415
L+DYDSIASAVAGCEGVFHVASPV S R +NPE EVIAPAVTGT NVLKAC EAKV+
Sbjct: 199 LLDYDSIASAVAGCEGVFHVASPVPSGRSTNPEEEVIAPAVTGTLNVLKACNEAKVK 369
Score = 196 bits (423), Expect = 2e-049
Identities = 90/115 (78%), Positives = 94/115 (81%)
Frame = -1 / -1
Query: 417 RLTFAS*QAFNTLVVPVTAGAMTSTSGLEGRWERTGLATWKTPSQPATADAMLS*SIRSA 238
RLTFAS QAFNT VPVTAGA+TS+SGL E TGLATWKTPSQPATADAMLS*S RSA
Sbjct: 371 RLTFASLQAFNTFSVPVTAGAITSSSGLVDLPEGTGLATWKTPSQPATADAMLS*SSRSA 192
Query: 237 LRSCNLSSAPSSTLRWAFLLAPGSRTVPRTAYWPRERRSFTSSDATKPPAPVTHT 73
L SC+LS APSS LR AFL PGSRTVPRT W ERRS TS +ATKPPAPVTHT
Sbjct: 191 LSSCSLSPAPSSALR*AFLALPGSRTVPRTV*WALERRSLTSHEATKPPAPVTHT 27
Score = 153 bits (329), Expect = 2e-036
Identities = 71/117 (60%), Positives = 82/117 (70%)
Frame = -3 / -3
Query: 409 FCLIASL*HIGCTCYSGSYDLHLRVGGSMGKDRASYMEDTLTAGNC*CNAVVVHQISLEK 230
FCL+ASL HI C CYS Y+ LRVG S +DRAS MED LTA N NAVVV Q+S E+
Sbjct: 363 FCLVASLQHIQCACYSRGYNFFLRVGRSTRRDRASNMEDALTASNRRRNAVVVQQVSAEQ 184
Query: 229 LQPFLSSFQHLEMGILASTRVAHGAADRVLAPGEEELHQLRRDEAASAGHAHALPHR 59
LQPF S+F LEM IL+ T +AHGAAD V+ GEEEL + DEA+ AGHAH P R
Sbjct: 183 LQPFPSTF*RLEMSILSITGIAHGAADSVVGLGEEELDEP*GDEASCAGHAHNAPLR 13
Score = 106 bits (227), Expect = 2e-022
Identities = 50/78 (64%), Positives = 55/78 (70%)
Frame = -2 / -2
Query: 416 A*LLPHSKPLTHWLYLLQREL*PPPQGWRVDGKGQG*LHGRHPHSRQLLMQCCRSPSDQP 237
A*LLP KP TH + LLQ+ L* PQGW + KGQG* HGR PHS+Q QCCRSP+ Q
Sbjct: 370 A*LLPRCKPSTHSVCLLQQGL*LLPQGWSIYQKGQG*QHGRRPHSQQPPTQCCRSPAGQR 191
Query: 236 *EAATFPQLLPAP*DGHS 183
* AA FPQ L AP*D HS
Sbjct: 190 *AAAAFPQHLLAP*DEHS 137
Score = 104 bits (222), Expect = 1e-021
Identities = 57/90 (63%), Positives = 62/90 (68%)
Frame = +3 / +2
Query: 144 TRSAAPCATLVLARMPISRCWKELRKGCSFSRLI*WTTTALHQQLPAVRVSSM*LALSFP 323
T SAAPCA V+ RM ISR K L KGCS S L WTTTAL ++L AVR SSM LALS
Sbjct: 98 TLSAAPCAIPVMLRMLISRR*KVLGKGCSCSALTCWTTTALRRRLLAVRASSMLLALSLL 277
Query: 324 IDPPTLRWRS*LPL*QVQPMC*RLAMRQKL 413
+D PTLR + * L*Q MC*RLA RQKL
Sbjct: 278 VDRPTLRKKL*PLL*QAH*MC*RLATRQKL 367
>gb|BU988879.1|BU988879 HF18P19r HF Hordeum vulgare subsp. vulgare cDNA clone HF18P19
5-PRIME, mRNA sequence
Length = 529
Score = 130 bits (278), Expect(2) = 2e-053
Identities = 48/88 (54%), Positives = 69/88 (78%)
Frame = +2 / +2
Query: 416 RVVVVSSCGAVYANPIYPKGKVFDEDCWSDEDYCRKKEDWYLVSKTLSEREALAFAAKTG 595
+V+V+SS AV NP +P+ K+ DE CWSD+D+C+K EDWY V+K ++E+ + ++ K G
Sbjct: 2 KVIVLSSTAAVDFNPNWPQDKLKDESCWSDKDFCQKNEDWYSVAKIVAEQASFEYSEKNG 181
Query: 596 LDVVTVCPSLVFGPLMQPTVNLSSEMIL 679
L+VVTVCP LVFGPL+QPTVN SS+ ++
Sbjct: 182 LNVVTVCPPLVFGPLLQPTVNTSSKFLI 265
Score = 100 bits (212), Expect(2) = 2e-053
Identities = 40/81 (49%), Positives = 58/81 (71%)
Frame = +2 / +2
Query: 698 ETVENVLSNMVDIRDVADALLLTYEKPEASGRYICSSHAIKISDMINILKTMYPSYPYPK 877
+ + N L ++VD+RDVADALLL YEK E+ GRYIC+ + I +D++++LK M+P Y Y
Sbjct: 287 DVMSNKLWHIVDVRDVADALLLVYEKAESYGRYICTPNNICTTDLVDLLKKMHPQYSYVN 466
Query: 878 NFVEDDVNSVYSSEKLQKLGW 940
N V+ D + SS+KL+ LGW
Sbjct: 467 NIVDVDRKAPISSQKLKDLGW 529
>gb|BQ766677.1|BQ766677 EBro08_SQ006_F23_R root, 3 week, drought-stressed, cv Optic, EBro08
Hordeum vulgare subsp. vulgare cDNA clone
EBro08_SQ006_F23 5', mRNA sequence
Length = 657
Score = 127 bits (273), Expect(3) = 8e-051
Identities = 51/113 (45%), Positives = 75/113 (66%)
Frame = +2 / +1
Query: 347 EVIAPAVTGTTNVLKACYEAKVRRVVVVSSCGAVYANPIYPKGKVFDEDCWSDEDYCRKK 526
++I PA+ GT V+ A + ++RVV S+ G VY NP K D+ CWSD DYC+K
Sbjct: 214 KMIEPAIRGTKYVITAAADMGIKRVVFTSTIGTVYMNPHRDPSKPVDDTCWSDLDYCKKT 393
Query: 527 EDWYLVSKTLSEREALAFAAKTGLDVVTVCPSLVFGPLMQPTVNLSSEMILKY 685
+WY +KT++E++AL A + G+++V V LV GPL+QPTVN S+E ++KY
Sbjct: 394 ANWYCYAKTVAEQDALETARQRGIELVVVNLVLVLGPLLQPTVNASTEHVMKY 552
Score = 84.9 bits (179), Expect(3) = 8e-051
Identities = 33/58 (56%), Positives = 43/58 (74%)
Frame = +2 / +1
Query: 143 YAVRGTVRDPGASKNAHLKVLEGAEERLQLLKADLMDYDSIASAVAGCEGVFHVASPV 316
Y VRGTVR+P KN HL+ +GA +RL LL+ADLM+ +++ A GCEG+FH ASPV
Sbjct: 25 YTVRGTVRNPVDPKNDHLRAFDGAADRLVLLRADLMEPETLVEAFTGCEGIFHAASPV 198
Score = 27.2 bits (53), Expect(3) = 8e-051
Identities = 11/29 (37%), Positives = 17/29 (58%)
Frame = +2 / +1
Query: 698 ETVENVLSNMVDIRDVADALLLTYEKPEA 784
+T N V ++DVA+A + YE P+A
Sbjct: 568 KTYVNAAQAYVHVKDVAEAHVRVYEAPDA 654
>gb|BE196376.3|BE196376 HVSMEh0092C03f Hordeum vulgare 5-45 DAP spike EST library
HVcDNA0009 (5 to 45 DAP) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEh0092C03f, mRNA sequence
Length = 975
Score = 197 bits (424), Expect(2) = 8e-051
Identities = 81/163 (49%), Positives = 110/163 (67%)
Frame = +2 / +1
Query: 92 GGFVASELVKLLLSRGQYAVRGTVRDPGASKNAHLKVLEGAEERLQLLKADLMDYDSIAS 271
GG + + LL YAV TVRDP KN HLK ++ A E L L +AD++DYD++
Sbjct: 94 GGGFIASWLVKLLLSRGYAVNATVRDPSDPKNVHLKQMDEARENLHLFRADVLDYDTLTR 273
Query: 272 AVAGCEGVFHVASPVLSHRPSNPEVEVIAPAVTGTTNVLKACYEAKVRRVVVVSSCGAVY 451
A GCEGVFH+A+PV + +PE EV+APAV GT+NVLKAC KV++V+V+SS AV
Sbjct: 274 AFEGCEGVFHLATPVPEDKIVDPESEVLAPAVKGTSNVLKACSAMKVQKVIVLSSTAAVD 453
Query: 452 ANPIYPKGKVFDEDCWSDEDYCRKKEDWYLVSKTLSEREALAF 580
NP +P+ K+ DE CWSD+D+C+K EDW +K ++ R +L F
Sbjct: 454 FNPNWPQDKLKDESCWSDKDFCQKNEDWVFCAKIVANRHSLIF 582
Score = 105 bits (225), Expect(2) = 4e-028
Identities = 56/108 (51%), Positives = 63/108 (58%)
Frame = -1 / -2
Query: 468 G*IGLAYTAPHEDTTTTRLTFAS*QAFNTLVVPVTAGAMTSTSGLEGRWERTGLATWKTP 289
G GL TA +D T T TF + QAF+T VP TAGA TS SG TG+A WKTP
Sbjct: 470 GQFGLKSTAAVDDKTITF*TFIAEQAFSTFEVPFTAGANTSDSGSTILSSGTGVARWKTP 291
Query: 288 SQPATADAMLS*SIRSALRSCNLSSAPSSTLRWAFLLAPGSRTVPRTA 145
S P+ A +S*S SAL C S A S LRW FL + GSRTV TA
Sbjct: 290 SHPSNARVSVS*SSTSALNKCRFSRASSICLRWTFLGSLGSRTVALTA 147
Score = 39.6 bits (80), Expect(2) = 4e-028
Identities = 15/22 (68%), Positives = 16/22 (72%)
Frame = -1 / -2
Query: 138 PRERRSFTSSDATKPPAPVTHT 73
PRER S TS +A PP PVTHT
Sbjct: 143 PRERSSLTSHEAMNPPPPVTHT 78
Score = 24.4 bits (47), Expect(2) = 8e-051
Identities = 9/13 (69%), Positives = 11/13 (84%)
Frame = +2 / +1
Query: 596 LDVVTVCPSLVFG 634
++VVT CPSLV G
Sbjct: 595 INVVTGCPSLVLG 633
>gb|BU989165.1|BU989165 HF19P19r HF Hordeum vulgare subsp. vulgare cDNA clone HF19P19
5-PRIME, mRNA sequence
Length = 518
Score = 130 bits (278), Expect(2) = 1e-050
Identities = 48/88 (54%), Positives = 69/88 (78%)
Frame = +2 / +2
Query: 416 RVVVVSSCGAVYANPIYPKGKVFDEDCWSDEDYCRKKEDWYLVSKTLSEREALAFAAKTG 595
+V+V+SS AV NP +P+ K+ DE CWSD+D+C+K EDWY V+K ++E+ + ++ K G
Sbjct: 2 KVIVLSSTAAVDFNPNWPQDKLKDESCWSDKDFCQKNEDWYSVAKIVAEQASFEYSEKNG 181
Query: 596 LDVVTVCPSLVFGPLMQPTVNLSSEMIL 679
L+VVTVCP LVFGPL+QPTVN SS+ ++
Sbjct: 182 LNVVTVCPPLVFGPLLQPTVNTSSKFLI 265
Score = 90.9 bits (192), Expect(2) = 1e-050
Identities = 37/77 (48%), Positives = 55/77 (71%)
Frame = +2 / +2
Query: 698 ETVENVLSNMVDIRDVADALLLTYEKPEASGRYICSSHAIKISDMINILKTMYPSYPYPK 877
+ + N L ++VD+RDVADALLL YEK E+ GRYIC+ + I +D++++LK M+P Y Y
Sbjct: 287 DVMSNKLWHIVDVRDVADALLLVYEKAESYGRYICTPNNICTTDLVDLLKKMHPQYSYVN 466
Query: 878 NFVEDDVNSVYSSEKLQ 928
N V+ D + SS+KL+
Sbjct: 467 NIVDVDRKAPISSQKLK 517
>gb|BG367870.1|BG367870 HVSMEi0014B22f Hordeum vulgare 20 DAP spike EST library HVcDNA0010
(20 DAP) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEi0014B22f, mRNA sequence
Length = 867
Score = 109 bits (232), Expect(2) = 5e-049
Identities = 46/103 (44%), Positives = 69/103 (66%)
Frame = +2 / +1
Query: 698 ETVENVLSNMVDIRDVADALLLTYEKPEASGRYICSSHAIKISDMINILKTMYPSYPYPK 877
+ + N L ++VD+RDVADALLL YEK E+ GRYIC+ + I +D++++LK M+P Y Y
Sbjct: 214 DVMSNKLWHIVDVRDVADALLLVYEKAESYGRYICTPNNICTTDLVDLLKKMHPQYSYVN 393
Query: 878 NFVEDDVNSVYSSEKLQKLGWTFKPIEESLRDTVESYKAFGIL 1006
N V+ D + SS+KL+ LGW + +EE+ D V+ + G L
Sbjct: 394 NIVDVDRKAPISSQKLKDLGWKPRKLEETPLDIVDCFDKAGPL 522
Score = 106 bits (226), Expect(2) = 5e-049
Identities = 37/64 (57%), Positives = 52/64 (81%)
Frame = +2 / +1
Query: 488 EDCWSDEDYCRKKEDWYLVSKTLSEREALAFAAKTGLDVVTVCPSLVFGPLMQPTVNLSS 667
E CWSD+D+C+K EDWY V+K ++E+ + ++ K GL+VVTVCP LVFGPL+QPTVN SS
Sbjct: 1 ESCWSDKDFCQKNEDWYSVAKIVAEQASFEYSEKNGLNVVTVCPPLVFGPLLQPTVNTSS 180
Query: 668 EMIL 679
+ ++
Sbjct: 181 KFLI 192
>gb|CA010479.1|CA010479 HT09N23u HT Hordeum vulgare subsp. vulgare cDNA clone HT09N23
3-PRIME, mRNA sequence
Length = 505
Score = 195 bits (420), Expect = 5e-049
Identities = 77/108 (71%), Positives = 96/108 (88%)
Frame = +2 / -1
Query: 698 ETVENVLSNMVDIRDVADALLLTYEKPEASGRYICSSHAIKISDMINILKTMYPSYPYPK 877
+TVEN L N+VD+RDVADALLL YEKPEASGRYICSS +K+SDMI++LKT+YP+Y YPK
Sbjct: 457 DTVENKLRNLVDVRDVADALLLAYEKPEASGRYICSSVPVKVSDMISVLKTLYPTYTYPK 278
Query: 878 NFVEDDVNSVYSSEKLQKLGWTFKPIEESLRDTVESYKAFGILN*TSN 1021
NFVE + N++YSSEKLQKLGW F+P+E++L D+VESY+A G+LN* SN
Sbjct: 277 NFVEVEGNTIYSSEKLQKLGWIFRPLEKTLGDSVESYRASGVLN*ASN 134
Score = 160 bits (345), Expect = 1e-038
Identities = 68/109 (62%), Positives = 83/109 (76%)
Frame = -3 / +2
Query: 1024 LVGCSIQDAKCLVGFNSVTEGFLYRLEGPPQLLQFLRAVYRVDIIFHKIFGIRVRRIHGL 845
LVGCS+QDA+C VGF++++EG L R E PP LL+FLRA+ + F+K+FGI V RI GL
Sbjct: 131 LVGCSVQDARCSVGFHAISEGLL*RPEDPP*LLKFLRAINSISFDFYKVFGISVCRI*GL 310
Query: 844 QYVYHIRNFYCM*TADVSSRRFWLFVSQKKSISNITNIHHITEYIFNSL 698
QY YHIR+FY *TADV SRR W F+ Q KSI NITNIH I E+IF S+
Sbjct: 311 QYAYHIRDFYWY*TADVPSRRLWFFICQ*KSIGNITNIH*IPEFIFYSI 457
Score = 116 bits (247), Expect = 3e-025
Identities = 62/106 (58%), Positives = 67/106 (63%)
Frame = +3 / -2
Query: 708 KMYSVIWWIFVXXXXXXXXXTKSQKRLDDTSAVHMQ*KFLI**TY*RPCIRLTLIPKILW 887
K+ S I W+FV K+Q+RLD TSAV Q*K LI** Y*RP IR TLIPK L
Sbjct: 447 KINSGI*WMFVMLPMLFYWHMKNQRRLDGTSAVQYQ*KSLI**AY*RPYIRHTLIPKTL* 268
Query: 888 KMMSTLYTALRNCRSWGGPSSL*RNPSVTLLNPTRHLAS*IEHPTR 1025
K L+ A RN RS GG S L*R PS NPT HLAS* EHPTR
Sbjct: 267 KSKEILFIARRNFRS*GGSSGL*RRPSEIAWNPTEHLAS*TEHPTR 130
Score = 73.5 bits (154), Expect(2) = 9e-022
Identities = 36/64 (56%), Positives = 36/64 (56%)
Frame = -1 / +3
Query: 882 KFLG*G*DGYMVFSMFIISEIFIACELQMYRPDASGFXXXXXXXXXXXXXXXILLSTFST 703
KFLG* GY VFS IISE F ELQMYRPDASGF LS FST
Sbjct: 273 KFLG*VYVGYKVFSTLIISETFTGTELQMYRPDASGFSYANRRASATSRTSTRFLSLFST 452
Query: 702 VSRS 691
VSRS
Sbjct: 453 VSRS 464
Score = 50.6 bits (104), Expect(2) = 9e-022
Identities = 22/31 (70%), Positives = 25/31 (80%)
Frame = -1 / +3
Query: 1020 LDVQFRMPNAL*DSTVSRRDSSIGLKVHPSF 928
LD QFR P+AL*DST+S R S GLK+HPSF
Sbjct: 135 LDAQFRTPDAL*DSTLSPRVFSKGLKIHPSF 227
>gb|AW983188.3|AW983188 HVSMEg0008J14f Hordeum vulgare pre-anthesis spike EST library
HVcDNA0008 (white to yellow anther) Hordeum vulgare
subsp. vulgare cDNA clone HVSMEg0008J14f, mRNA sequence
Length = 910
Score = 171 bits (368), Expect(2) = 4e-048
Identities = 74/163 (45%), Positives = 102/163 (62%)
Frame = +2 / +2
Query: 125 LLSRGQYAVRGTVRDPGASKNAHLKVLEGAEERLQLLKADLMDYDSIASAVAGCEGVFHV 304
LL YAV TVRDP KNA L L+GA L+L KAD++DYD++ +A AGCEGV HV
Sbjct: 122 LLLSRGYAVHATVRDPRDPKNAFLTELDGAPANLRLFKADVLDYDTVTAAFAGCEGVLHV 301
Query: 305 ASPVLSHRPSNPEVEVIAPAVTGTTNVLKACYEAKVRRVVVVSSCGAVYANPIYPKGKVF 484
+PV + +P+ E++ PAV GT NVLKAC KV +++VVS NP + K+
Sbjct: 302 NTPVPEKKMVDPQKEMMEPAVKGTMNVLKACSATKVHKLIVVSFIDTSCYNPDWTPDKIK 481
Query: 485 DEDCWSDEDYCRKKEDWYLVSKTLSEREALAFAAKTGLDVVTV 613
DE CWSD++ ++E+W ++KT + AL K G+ VVT+
Sbjct: 482 DESCWSDKELFEQRENWCSLAKTEAHEMALGIGEKNGVHVVTI 610
Score = 40.9 bits (83), Expect(2) = 4e-048
Identities = 17/22 (77%), Positives = 18/22 (81%)
Frame = +2 / +2
Query: 74 VCVTGAGGFVASELVKLLLSRG 139
VCVTG GF+ S LVKLLLSRG
Sbjct: 74 VCVTGGNGFIGSCLVKLLLSRG 139
>gb|BJ468735.1|BJ468735 BJ468735 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp.
vulgare cDNA clone basd27a15 5', mRNA sequence
Length = 505
Score = 189 bits (408), Expect = 2e-047
Identities = 83/164 (50%), Positives = 107/164 (65%)
Frame = +2 / +3
Query: 92 GGFVASELVKLLLSRGQYAVRGTVRDPGASKNAHLKVLEGAEERLQLLKADLMDYDSIAS 271
GG + + LL YAV TVRDP KNAHL L+GA E L+L KAD++D ++A+
Sbjct: 12 GGGFIASWLVKLLLSRGYAVHATVRDPSDQKNAHLMQLDGAAENLRLFKADVLDSAALAA 191
Query: 272 AVAGCEGVFHVASPVLSHRPSNPEVEVIAPAVTGTTNVLKACYEAKVRRVVVVSSCGAVY 451
AV GCEGVFHVASPV + + +PE EV+ PAV GT N L+ C KV++VVVVSS AV
Sbjct: 192 AVEGCEGVFHVASPVPADKILDPESEVMVPAVKGTLNTLEVCSSLKVQKVVVVSSTAAVR 371
Query: 452 ANPIYPKGKVFDEDCWSDEDYCRKKEDWYLVSKTLSEREALAFA 583
NP +P GK DE CWSD C+ E WY ++KT++E+ +A
Sbjct: 372 YNPNWPLGKPKDESCWSDRKVCKDNEIWYCLAKTVAEQTVWEYA 503
Score = 102 bits (218), Expect(2) = 1e-025
Identities = 57/111 (51%), Positives = 64/111 (57%)
Frame = -1 / -1
Query: 477 LPFG*IGLAYTAPHEDTTTTRLTFAS*QAFNTLVVPVTAGAMTSTSGLEGRWERTGLATW 298
LP G +GL TA +DTTTT TF Q VP TAG MTS SG TG ATW
Sbjct: 397 LPRGQLGL*RTAAVDDTTTTF*TFRDEQTSRVFKVPFTAGTMTSDSGSRILSAGTGEATW 218
Query: 297 KTPSQPATADAMLS*SIRSALRSCNLSSAPSSTLRWAFLLAPGSRTVPRTA 145
KTPS P+TA A + S SAL S+APSS +R AF + GSRTV TA
Sbjct: 217 KTPSHPSTAAASAALSSTSALNRRRFSAAPSSCIRCAFFWSLGSRTVAWTA 65
Score = 34.1 bits (68), Expect(2) = 1e-025
Identities = 13/21 (61%), Positives = 17/21 (80%)
Frame = -3 / -3
Query: 142 LAPGEEELHQLRRDEAASAGH 80
+APGEE+L + R DE A+AGH
Sbjct: 65 VAPGEEQLDEPRGDEPAAAGH 3
>gb|BG366287.1|BG366287 HVSMEi0006J10f Hordeum vulgare 20 DAP spike EST library HVcDNA0010
(20 DAP) Hordeum vulgare subsp. vulgare cDNA clone
HVSMEi0006J10f, mRNA sequence
Length = 713
Score = 70.3 bits (147), Expect(5) = 1e-046
Identities = 29/49 (59%), Positives = 35/49 (71%)
Frame = +2 / +3
Query: 353 IAPAVTGTTNVLKACYEAKVRRVVVVSSCGAVYANPIYPKGKVFDEDCW 499
+APAV GT NVLKAC++AKV RVVVV S V NP +P+ V D+D W
Sbjct: 447 LAPAVRGTQNVLKACHQAKVGRVVVVFSAAVVAMNPNFPRDPVLDQDPW 593
Score = 64.8 bits (135), Expect(5) = 1e-046
Identities = 28/37 (75%), Positives = 30/37 (81%)
Frame = +2 / +3
Query: 65 RKSVCVTGAGGFVASELVKLLLSRGQYAVRGTVRDPG 175
+K+VCVTGAGGFVAS LVK LLS G Y V GTVRD G
Sbjct: 54 KKTVCVTGAGGFVASWLVKRLLSTGDYTVHGTVRDLG 164
Score = 60.2 bits (125), Expect(5) = 1e-046
Identities = 24/40 (60%), Positives = 30/40 (75%)
Frame = +2 / +3
Query: 173 GASKNAHLKVLEGAEERLQLLKADLMDYDSIASAVAGCEG 292
G K HLK L+GA ERL+L KAD++DY ++A AVAGC G
Sbjct: 264 GDRKTGHLKALDGAGERLRLFKADVLDYATVACAVAGCGG 383
Score = 56.1 bits (116), Expect(4) = 7e-027
Identities = 24/39 (61%), Positives = 27/39 (69%)
Frame = -1 / -2
Query: 183 LLAPGSRTVPRTAYWPRERRSFTSSDATKPPAPVTHTLF 67
L+ P SRTVP T P ER TS +AT PPAPVTHT+F
Sbjct: 172 LILPRSRTVPCTV*SPVERSRLTSQEATNPPAPVTHTVF 56
Score = 46.9 bits (96), Expect(4) = 7e-027
Identities = 23/47 (48%), Positives = 28/47 (59%)
Frame = -1 / -2
Query: 312 GLATWKTPSQPATADAMLS*SIRSALRSCNLSSAPSSTLRWAFLLAP 172
G + P QPATA A ++*S SAL S + S APSS RW L +P
Sbjct: 403 GAGDVEEPPQPATAHATVA*SSTSALNSRSRSPAPSSAFRWPVLRSP 263
Score = 41.4 bits (84), Expect(4) = 7e-027
Identities = 20/38 (52%), Positives = 24/38 (63%)
Frame = -1 / -2
Query: 468 G*IGLAYTAPHEDTTTTRLTFAS*QAFNTLVVPVTAGA 355
G +G T E+TTTTR T A QA +T VP+TAGA
Sbjct: 562 GKLGFMATTAAENTTTTRPTLAWWQALSTFCVPLTAGA 449
Score = 40.0 bits (81), Expect(5) = 1e-046
Identities = 15/22 (68%), Positives = 19/22 (86%)
Frame = +2 / +2
Query: 293 VFHVASPVLSHRPSNPEVEVIA 358
+FHVASPV + +P NPEVEV+A
Sbjct: 383 LFHVASPVPADKPQNPEVEVLA 448
Score = 31.8 bits (63), Expect(4) = 7e-027
Identities = 14/22 (63%), Positives = 15/22 (68%)
Frame = -1 / -3
Query: 357 AMTSTSGLEGRWERTGLATWKT 292
A TSTSG G TGLATWK+
Sbjct: 447 ARTSTSGFWGLSAGTGLATWKS 382
Score = 25.8 bits (50), Expect(5) = 1e-046
Identities = 11/18 (61%), Positives = 12/18 (66%)
Frame = +2 / +3
Query: 566 EALAFAAKTGLDVVTVCP 619
EALA +TGLD VT P
Sbjct: 660 EALAHPGRTGLDTVTRLP 713
>gb|BG301229.1|BG301229 HVSMEb0020B01f Hordeum vulgare seedling shoot EST library
HVcDNA0002 (Dehydration stress) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEb0020B01f, mRNA sequence
Length = 893
Score = 100 bits (212), Expect(5) = 6e-046
Identities = 42/64 (65%), Positives = 48/64 (75%)
Frame = +2 / +2
Query: 125 LLSRGQYAVRGTVRDPGASKNAHLKVLEGAEERLQLLKADLMDYDSIASAVAGCEGVFHV 304
LL Y V+GTVR+P KNAHLK L+GA ERL L KADL+DYD+I +AV GC GVFH
Sbjct: 191 LLLERGYTVKGTVRNPDDPKNAHLKALDGAAERLVLCKADLLDYDAICAAVEGCHGVFHT 370
Query: 305 ASPV 316
ASPV
Sbjct: 371 ASPV 382
Score = 54.7 bits (113), Expect(5) = 6e-046
Identities = 22/54 (40%), Positives = 31/54 (57%)
Frame = +2 / +2
Query: 410 VRRVVVVSSCGAVYANPIYPKGKVFDEDCWSDEDYCRKKEDWYLVSKTLSEREA 571
VRRVV SS GAV +P V DE CWSD ++C+ ++WY +++ A
Sbjct: 464 VRRVVFTSSIGAVTMDPNRGPDVVVDESCWSDLEFCKITKNWYCYCNAVADHAA 625
Score = 42.8 bits (87), Expect(5) = 6e-046
Identities = 17/24 (70%), Positives = 21/24 (87%)
Frame = +2 / +2
Query: 68 KSVCVTGAGGFVASELVKLLLSRG 139
++VCVTGA G++AS LVKLLL RG
Sbjct: 137 QTVCVTGAAGYIASWLVKLLLERG 208
Score = 31.8 bits (63), Expect(5) = 6e-046
Identities = 13/24 (54%), Positives = 17/24 (70%)
Frame = +2 / +3
Query: 611 VCPSLVFGPLMQPTVNLSSEMILK 682
V P LV GP++ PTVN ++ ILK
Sbjct: 663 VKPVLVVGPVLHPTVNATARPILK 734
Score = 29.5 bits (58), Expect(5) = 6e-046
Identities = 12/47 (25%), Positives = 23/47 (48%)
Frame = +2 / +3
Query: 698 ETVENVLSNMVDIRDVADALLLTYEKPEASGRYICSSHAIKISDMIN 838
+ V + + +D+RD+A L + P+A G C + + D+ N
Sbjct: 753 QEVAHAVQAFLDLRDIAGTHLRVFRGPKALGVTFCDKRVLVL*DLGN 893
>gb|BI948507.1|BI948507 HVSMEl0009O08f Hordeum vulgare spike EST library HVcDNA0012
(Fusarium infected) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEl0009O08f, mRNA sequence
Length = 1042
Score = 182 bits (393), Expect = 2e-045
Identities = 84/186 (45%), Positives = 114/186 (61%)
Frame = +2 / +3
Query: 92 GGFVASELVKLLLSRGQYAVRGTVRDPGASKNAHLKVLEGAEERLQLLKADLMDYDSIAS 271
GG + + LL YAV TVRDP KNAHL L+GA E L L KAD++D ++A+
Sbjct: 96 GGGFIASWLVKLLLSRGYAVHTTVRDPCDQKNAHLMQLDGAAESLSLFKADMLDRAALAA 275
Query: 272 AVAGCEGVFHVASPVLSHRPSNPEVEVIAPAVTGTTNVLKACYEAKVRRVVVVSSCGAVY 451
A AGC+GVFHV SPV + + PE E++ PAV GT N+L+ KV++VVVVSS V+
Sbjct: 276 AAAGCQGVFHVTSPVPADKTVYPESEIMVPAVKGTLNILEVGASLKVQKVVVVSSTADVH 455
Query: 452 ANPIYPKGKVFDEDCWSDEDYCRKKEDWYLVSKTLSEREALAFAAKTGLDVVTVCPSLVF 631
NP +P GK DE W+D+ C +KE Y +KT++E L + + L VV + P +
Sbjct: 456 YNPNWPWGKPKDESFWADKKICMEKEALYTFAKTVAEENRLGISIQK*LHVVPLGPYMAI 635
Query: 632 GPLMQP 649
GP +QP
Sbjct: 636 GPPLQP 653
Score = 64.3 bits (134), Expect(3) = 4e-023
Identities = 32/57 (56%), Positives = 36/57 (63%)
Frame = -1 / -1
Query: 315 TGLATWKTPSQPATADAMLS*SIRSALRSCNLSSAPSSTLRWAFLLAPGSRTVPRTA 145
TG TWKTP QPA A A + S SAL LS+APSS +R AF + GSRTV TA
Sbjct: 319 TGEVTWKTPWQPAAAAASAARSSMSALNKLRLSAAPSSCIRCAFFWSHGSRTVVWTA 149
Score = 41.4 bits (84), Expect(3) = 4e-023
Identities = 16/22 (72%), Positives = 16/22 (72%)
Frame = -1 / -1
Query: 138 PRERRSFTSSDATKPPAPVTHT 73
PRER S TS DA PP PVTHT
Sbjct: 145 PRERSSLTSHDAMNPPPPVTHT 80
Score = 40.5 bits (82), Expect(3) = 4e-023
Identities = 23/47 (48%), Positives = 25/47 (53%)
Frame = -1 / -1
Query: 477 LPFG*IGLAYTAPHEDTTTTRLTFAS*QAFNTLVVPVTAGAMTSTSG 337
LP G +GL T+ EDTTTT TF VP TAG M S SG
Sbjct: 481 LPQGQLGL**TSAVEDTTTTF*TFKDAPTSRIFKVPFTAGTMISDSG 341
>gb|BJ469082.1|BJ469082 BJ469082 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal13a15 5', mRNA sequence
Length = 554
Score = 90.4 bits (191), Expect(3) = 3e-045
Identities = 38/58 (65%), Positives = 44/58 (75%)
Frame = +2 / +3
Query: 143 YAVRGTVRDPGASKNAHLKVLEGAEERLQLLKADLMDYDSIASAVAGCEGVFHVASPV 316
YAV TVRDP KNA LK L+ A E LQL KAD++DYD +A+A GCEGVFH+ASPV
Sbjct: 12 YAVNATVRDPCDPKNACLKQLDMAPENLQLFKADMLDYDMVATAFVGCEGVFHLASPV 185
Score = 79.0 bits (166), Expect(3) = 3e-045
Identities = 30/56 (53%), Positives = 41/56 (73%)
Frame = +2 / +3
Query: 698 ETVENVLSNMVDIRDVADALLLTYEKPEASGRYICSSHAIKISDMINILKTMYPSY 865
+T+ N +VD+RDVADALLL Y K + RYICS H I I D+++++K+MYPSY
Sbjct: 387 DTINNKFWPIVDVRDVADALLLLYNKAKPCQRYICSEHQIDIKDLVDLMKSMYPSY 554
Score = 56.1 bits (116), Expect(3) = 3e-045
Identities = 25/54 (46%), Positives = 32/54 (59%)
Frame = +2 / +3
Query: 524 KEDWYLVSKTLSEREALAFAAKTGLDVVTVCPSLVFGPLMQPTVNLSSEMILKY 685
KE WY ++K +E AL +A K GL VVT C VFGPL+Q V + L+Y
Sbjct: 207 KEIWYALAKMEAEEMALEYADKNGLHVVTFCSGAVFGPLLQADVLNITTKFLRY 368
>gb|CB876594.1|CB876594 HX11M09w HX Hordeum vulgare subsp. vulgare cDNA clone HX11M09
3-PRIME, mRNA sequence
Length = 565
Score = 182 bits (391), Expect = 5e-045
Identities = 71/99 (71%), Positives = 89/99 (89%)
Frame = +2 / -1
Query: 725 MVDIRDVADALLLTYEKPEASGRYICSSHAIKISDMINILKTMYPSYPYPKNFVEDDVNS 904
+VD+RDVADALLL YEKPEASGRYICSS +K+SDMI++LKT+YP+Y YPKNFVE + N+
Sbjct: 565 LVDVRDVADALLLAYEKPEASGRYICSSVPVKVSDMISVLKTLYPTYTYPKNFVEVEGNT 386
Query: 905 VYSSEKLQKLGWTFKPIEESLRDTVESYKAFGILN*TSN 1021
+YSSEKLQKLGW F+P+E++L D+VESY+A G+LN* SN
Sbjct: 385 IYSSEKLQKLGWIFRPLEKTLGDSVESYRASGVLN*ASN 269
Score = 151 bits (324), Expect = 8e-036
Identities = 63/99 (63%), Positives = 76/99 (76%)
Frame = -3 / +2
Query: 1024 LVGCSIQDAKCLVGFNSVTEGFLYRLEGPPQLLQFLRAVYRVDIIFHKIFGIRVRRIHGL 845
LVGCS+QDA+C VGF++++EG L R E PP LL+FLRA+ + F+K+FGI V RI GL
Sbjct: 266 LVGCSVQDARCSVGFHAISEGLL*RPEDPP*LLKFLRAINSISFDFYKVFGISVCRI*GL 445
Query: 844 QYVYHIRNFYCM*TADVSSRRFWLFVSQKKSISNITNIH 728
QY YHIR+FY *TADV SRR W F+ Q KSI NITNIH
Sbjct: 446 QYAYHIRDFYWY*TADVPSRRLWFFICQ*KSIGNITNIH 562
Score = 113 bits (242), Expect = 2e-024
Identities = 59/99 (59%), Positives = 63/99 (63%)
Frame = +3 / -2
Query: 729 WIFVXXXXXXXXXTKSQKRLDDTSAVHMQ*KFLI**TY*RPCIRLTLIPKILWKMMSTLY 908
W+FV K+Q+RLD TSAV Q*K LI** Y*RP IR TLIPK L K L+
Sbjct: 561 WMFVMLPMLFYWHMKNQRRLDGTSAVQYQ*KSLI**AY*RPYIRHTLIPKTL*KSKEILF 382
Query: 909 TALRNCRSWGGPSSL*RNPSVTLLNPTRHLAS*IEHPTR 1025
A RN RS GG S L*R PS NPT HLAS* EHPTR
Sbjct: 381 IARRNFRS*GGSSGL*RRPSEIAWNPTEHLAS*TEHPTR 265
>gb|BJ457744.1|BJ457744 BJ457744 K. Sato unpublished cDNA library, cv. Akashinriki
vegetative stage leaves Hordeum vulgare subsp. vulgare
cDNA clone baak29b22 3', mRNA sequence
Length = 633
Score = 98.2 bits (208), Expect(3) = 7e-045
Identities = 34/69 (49%), Positives = 51/69 (73%)
Frame = +2 / -3
Query: 485 DEDCWSDEDYCRKKEDWYLVSKTLSEREALAFAAKTGLDVVTVCPSLVFGPLMQPTVNLS 664
DE CWSD+++CR + WY V+K +E AL + +TGL VVT+ P+LVFGPL+QPT+N S
Sbjct: 631 DESCWSDKEFCRSNQSWYPVAKIAAEAAALEYGRETGLGVVTLNPALVFGPLLQPTINTS 452
Query: 665 SEMILKYFK 691
S+ ++ + +
Sbjct: 451 SQFLIYFLR 425
Score = 79.9 bits (168), Expect(3) = 7e-045
Identities = 30/51 (58%), Positives = 41/51 (80%)
Frame = +2 / -3
Query: 716 LSNMVDIRDVADALLLTYEKPEASGRYICSSHAIKISDMINILKTMYPSYP 868
L ++VD+RDVADALLL YE PEA+GR+IC+ H I +++ +LK+MYP YP
Sbjct: 397 LWHIVDVRDVADALLLLYEAPEATGRHICAPHFITARELLGLLKSMYPGYP 245
Score = 41.8 bits (85), Expect(3) = 7e-045
Identities = 18/47 (38%), Positives = 26/47 (55%)
Frame = +2 / -3
Query: 911 SSEKLQKLGWTFKPIEESLRDTVESYKAFGILN*TSN*DCFHLLLPP 1051
+S KL+KLGW+ +P+ E++ DTVE + G L D PP
Sbjct: 196 TSGKLEKLGWSSRPLRETITDTVECCREAGFLQDADGGDDTPCRFPP 56
Database: Hordeum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:16 PM
Number of letters in database: 175,134,539
Number of sequences in database: 312,970
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 595,938,972
Number of Sequences: 312970
Number of extensions: 9830515
Number of successful extensions: 74511
Number of sequences better than 1.0e-020: 283
length of database: 58,378,179
effective HSP length: 53
effective length of database: 41,790,769
effective search space used: 14961095302
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)