TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 131537.2.170
(744 letters)
Database: Hordeum_nucl_with_EST.fasta
312,970 sequences; 175,134,539 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BU975642.1|BU975642 HB31N05r BC Hordeum vulgare subsp. v... 338 2e-092
gb|BE195976.3|BE195976 HVSMEh0091A07f Hordeum vulgare 5-45 ... 337 5e-092
gb|BF629097.2|BF629097 HVSMEb0009N21f Hordeum vulgare seedl... 320 4e-087
gb|CA031166.1|CA031166 HX09D06r HX Hordeum vulgare subsp. v... 305 2e-082
gb|CB876456.1|CB876456 HX11F07w HX Hordeum vulgare subsp. v... 305 2e-082
gb|BU985772.1|BU985772 HF08J07r HF Hordeum vulgare subsp. v... 302 1e-081
gb|BU969384.1|BU969384 HB11G01r BC Hordeum vulgare subsp. v... 300 5e-081
gb|BU971417.1|BU971417 HB17I20r BC Hordeum vulgare subsp. v... 284 5e-076
gb|AV918379.1|AV918379 AV918379 K. Sato unpublished cDNA li... 281 2e-075
gb|AV918127.1|AV918127 AV918127 K. Sato unpublished cDNA li... 279 1e-074
gb|CB876294.1|CB876294 HX10N18w HX Hordeum vulgare subsp. v... 272 2e-072
gb|CB874380.1|CB874380 HX05B15w HX Hordeum vulgare subsp. v... 271 2e-072
gb|CB875735.1|CB875735 HX09D06w HX Hordeum vulgare subsp. v... 271 2e-072
gb|CB875995.1|CB875995 HX09P10w HX Hordeum vulgare subsp. v... 271 2e-072
gb|BU974279.1|BU974279 HB27H05r BC Hordeum vulgare subsp. v... 269 2e-071
gb|AV918025.1|AV918025 AV918025 K. Sato unpublished cDNA li... 265 1e-070
gb|BQ462861.1|BQ462861 HI02D22r HI Hordeum vulgare subsp. v... 225 5e-066
gb|BQ472674.1|BQ472674 HB01M23r BC Hordeum vulgare subsp. v... 238 3e-062
gb|AV931339.1|AV931339 AV931339 K. Sato unpublished cDNA li... 227 4e-059
gb|BU969648.1|BU969648 HB12C12r BC Hordeum vulgare subsp. v... 221 3e-057
gb|AV937068.1|AV937068 AV937068 K. Sato unpublished cDNA li... 194 5e-049
gb|BQ664937.1|BQ664937 HX01H11w HX Hordeum vulgare subsp. v... 188 2e-047
gb|CB876232.1|CB876232 HX10K21w HX Hordeum vulgare subsp. v... 188 2e-047
gb|BU976900.1|BU976900 HA10I02u HA Hordeum vulgare subsp. v... 178 3e-044
gb|BQ659639.1|BQ659639 HF01C16w HF Hordeum vulgare subsp. v... 175 2e-043
gb|CA022160.1|CA022160 HZ42F08r HZ Hordeum vulgare subsp. v... 157 7e-038
gb|CB874756.1|CB874756 HX06D16w HX Hordeum vulgare subsp. v... 138 2e-034
gb|AV916245.1|AV916245 AV916245 K. Sato unpublished cDNA li... 142 2e-033
gb|BJ451080.1|BJ451080 BJ451080 K. Sato unpublished cDNA li... 141 4e-033
gb|BG415995.2|BG415995 HVSMEk0009F13f Hordeum vulgare testa... 141 5e-033
gb|BJ473415.1|BJ473415 BJ473415 K. Sato unpublished cDNA li... 141 5e-033
gb|CA030113.1|CA030113 HX06C02r HX Hordeum vulgare subsp. v... 141 5e-033
gb|CB874722.1|CB874722 HX06C02w HX Hordeum vulgare subsp. v... 141 5e-033
gb|BM100617.2|BM100617 EBma01_SQ005_L23_R maternal, 4 DPA, ... 140 7e-033
gb|AV921670.1|AV921670 AV921670 K. Sato unpublished cDNA li... 89 2e-031
gb|BU986936.1|BU986936 HF13F11r HF Hordeum vulgare subsp. v... 130 1e-029
gb|BG415324.2|BG415324 HVSMEk0006A22f Hordeum vulgare testa... 117 8e-029
gb|CA001521.1|CA001521 HS17L21u HS Hordeum vulgare subsp. v... 127 9e-029
gb|BU973725.1|BU973725 HB25M17r BC Hordeum vulgare subsp. v... 117 1e-028
gb|BU996805.1|BU996805 HM14N04r HM Hordeum vulgare subsp. v... 122 3e-027
gb|CD663310.1|CD663310 UCRHV18_05ad02_b1 Drought-stressed D... 121 4e-027
gb|BU971142.1|BU971142 HB16L19r BC Hordeum vulgare subsp. v... 117 5e-026
gb|CB859263.1|CB859263 HI09O13w HI Hordeum vulgare subsp. v... 105 3e-025
gb|BJ468650.1|BJ468650 BJ468650 K. Sato unpublished cDNA li... 115 4e-025
gb|BE215344.1|BE215344 HV_CEb0006I15f Hordeum vulgare seedl... 107 6e-023
emb|AJ234606.1|HVU234606 Hordeum vulgare genomic DNA fragme... 58 2e-022
gb|BG417822.1|BG417822 HVSMEk0019K06f Hordeum vulgare testa... 102 3e-021
gb|BM372523.2|BM372523 EBpi05_SQ003_D09_R pistil, 8 DPA, no... 102 3e-021
>gb|BU975642.1|BU975642 HB31N05r BC Hordeum vulgare subsp. vulgare cDNA clone HB31N05
5-PRIME, mRNA sequence
Length = 617
Score = 338 bits (733), Expect = 2e-092
Identities = 134/157 (85%), Positives = 145/157 (92%)
Frame = +2 / +2
Query: 2 KWSPKFTVIVAQKNXHTKFFQTASPDNVLPGTVVDSKVCHPKNFDFYMCAHAGMIGTTRP 181
KW PKFTVIVAQKN HT+FFQT SP+NV PGTVVD +VCHPKNFDFYMCAHAGMIGT+RP
Sbjct: 38 KWEPKFTVIVAQKNHHTRFFQTNSPENVPPGTVVDKQVCHPKNFDFYMCAHAGMIGTSRP 217
Query: 182 THYHVLHDEIGFNADEMQEFVHSLSYVYQRSTTAISVVAPVCYAHLAAAQVSTFLRLEEM 361
THYHVLHDEIGF+ADE+QEFVHSLSYVYQRSTTAISV AP+ YAHLAAAQV TF++ E+M
Sbjct: 218 THYHVLHDEIGFSADELQEFVHSLSYVYQRSTTAISVAAPIAYAHLAAAQVGTFMKFEDM 397
Query: 362 SDASSSQGGGHTSAGSAPVPELPRLHDKVRSSMFFC* 472
SD SSSQGGGHTS GSA VPELPRLH+KVRSSMFFC*
Sbjct: 398 SDTSSSQGGGHTSVGSASVPELPRLHEKVRSSMFFC* 508
Score = 253 bits (548), Expect = 6e-067
Identities = 117/155 (75%), Positives = 124/155 (80%)
Frame = -1 / -3
Query: 468 QKNMELLTLSCRRGSSGTGALPAEVCPPPWLEDASDISSNLRNVLTWAAARWA*HTGATT 289
QKNMELLT SC RGSSGT ALP +V PPPWL++ SD+SSN V T AAAR A GA T
Sbjct: 504 QKNMELLTFSCSRGSSGTEALPTDVWPPPWLDEVSDMSSNFMKVPTCAAARCAYAIGAAT 325
Query: 288 EMAVVLLWYT*ESE*TNSCISSALKPISSCRT**WVGLVVPIIPACAHM*KSKFLGWQTL 109
E+AVVLLWYT*ESE TNS SSALKPISSCRT * VGL VPIIPACAHM*KSKFLGW T
Sbjct: 324 EIAVVLLWYT*ESEWTNSWSSSALKPISSCRTW*CVGLDVPIIPACAHM*KSKFLGWHTC 145
Query: 108 LSTTVPGRTLSGDAV*KNLVWXFF*ATITVNLGDH 4
LSTTVPG T SG+ V KNLV FF*AT+TVNLG H
Sbjct: 144 LSTTVPGGTFSGEFVWKNLV*WFF*ATMTVNLGSH 40
Score = 189 bits (407), Expect = 2e-047
Identities = 86/156 (55%), Positives = 111/156 (71%)
Frame = -3 / -2
Query: 469 AEEHGAPDFVMQARQLRHRSTASRGMPSSLAGGRV*HLLQSQERAHLGCSEVGVAHWSNH 290
AEEHGAP F+MQ RQLRHR A R + SLA V H+L+ E AHL ++ V +WS++
Sbjct: 505 AEEHGAPHFLMQPRQLRHRGAAHRRVAPSLARRSVRHVLKLHEGAHLRRRQMRVRYWSSY 326
Query: 289 *DGCRAPLVHVRERMNKLLHLVGIETYLVVQNMIVGGPCCSNHPSMCTHVEVEVLRMANF 110
*+ RAPLVH+R+R++KLL LV E L++QNM++ P +NHPSM THVEV+VL MA+
Sbjct: 325 *NRRRAPLVHIRKRVDKLLELVRAEANLIMQNMVMRWPRRANHPSMRTHVEVKVLGMAHL 146
Query: 109 TIHHSSRKNIVW*CRLKELGVXVLLSNNHSELG*PL 2
IHH +R+NI W L++ GV VLLSNN ELG PL
Sbjct: 145 FIHHRTRRNIFWRICLEKSGVMVLLSNNDCELGLPL 38
Score = 185 bits (399), Expect = 2e-046
Identities = 83/157 (52%), Positives = 101/157 (64%)
Frame = +1 / +1
Query: 1 EVVTQVHCDCCSKEPPHQVLSDGITRQCSSWNCGG**SLPS*ELRLLHVCTCWDDWNNKA 180
+V QVH CCS+EP HQ+ D R+CSSW GG* S+PS EL LLHVC CWDDW+ +A
Sbjct: 37 QVGAQVHSHCCSEEPSHQIFPDKFARKCSSWYGGG*TSVPSQEL*LLHVCACWDDWHVEA 216
Query: 181 HPLSCSARRDRFQCRRDAGVCSFALLRVPEEHDSHLSGCSSVLRPPRCSPGEHVPEIGGD 360
+ L CSA D Q R GVC A L VPEEHD S CS+ +R G H+ E+ G
Sbjct: 217 NALPCSA**DWLQRGRAPGVCPLAFLCVPEEHDGDFSSCSNSVRASGGGAGGHLHEV*GH 396
Query: 361 VRRVLQPGRRAYLGWQCSCAGAASPA*QSQELHVLLL 471
V ++PGR ++G Q AGAAS A*+S+ELHVLLL
Sbjct: 397 VGHFVEPGRGPHVGGQRLGAGAASAA*ESEELHVLLL 507
Score = 160 bits (345), Expect = 6e-039
Identities = 76/148 (51%), Positives = 86/148 (58%)
Frame = -2 / -1
Query: 446 LCHAGEAAPAQEHCQPRYALLPGWRTRLTSPPISGTCSPGLQRGGRSTLEQPLRWLSCSS 267
L HA EAAPA C P LPG T P S C P R+ LEQ L+ SCSS
Sbjct: 482 LSHAAEAAPAPRRCPPTCGPLPGSTKCPTCPQTS*RCPPAPPPDARTLLEQLLKSPSCSS 303
Query: 266 GTRKRANEQTPASRRH*NLSRRAEHDSGWALLFQSSQHVHTCRSRSS*DGKLYYPPQFQE 87
GT K+A+ QTP +R *+ S AEH + A QSSQH HTCRS+SS DG L YPP +QE
Sbjct: 302 GTHKKASGQTPGARPR*SQSHHAEHGNALASTCQSSQHAHTCRSQSSWDGTLVYPPPYQE 123
Query: 86 EHCLVMPSERTWCGGSFEQQSQ*TWVTT 3
EH L S + WC GS EQQ *TW T
Sbjct: 122 EHFLANLSGKIWCDGSSEQQ*L*TWAPT 39
Score = 136 bits (291), Expect = 2e-031
Identities = 73/148 (49%), Positives = 80/148 (54%)
Frame = +3 / +3
Query: 3 SGHPXXXXXXXKRTXTPSSFRRHHQTMFFLELWWIVKFAILRTSTSTCVHMLG*LEQQGP 182
SG P +RT TP R+ Q MF L WWI K AI RT TSTCV MLG*L ++G
Sbjct: 39 SGSPSSQSLLLRRTITPDFSRQIRQKMFLLVRWWINKCAIPRTLTSTCVRMLG*LARRGQ 218
Query: 183 PTIMFCTTR*VSMPTRCRSLFIRSLTCTRGARQPSQWLLQCATPTSLQPR*ARS*DWRRC 362
MFC R S T RSL R L CTRGAR+ Q LLQ T + R A S* R C
Sbjct: 219 RITMFCMMRLASARTSSRSLSTRFLMCTRGARRRFQ*LLQ*RTRIWRRRRWAPS*SLRTC 398
Query: 363 QTRPPAREEGIPRLAVLLCRSCLACMTK 446
+T ARE R A CRSCL CM K
Sbjct: 399 RTLRRAREGATRRWAAPRCRSCLGCMRK 482
>gb|BE195976.3|BE195976 HVSMEh0091A07f Hordeum vulgare 5-45 DAP spike EST library
HVcDNA0009 (5 to 45 DAP) Hordeum vulgare subsp. vulgare
cDNA clone HVSMEh0091A07f, mRNA sequence
Length = 1009
Score = 337 bits (730), Expect = 5e-092
Identities = 133/157 (84%), Positives = 145/157 (92%)
Frame = +2 / +1
Query: 2 KWSPKFTVIVAQKNXHTKFFQTASPDNVLPGTVVDSKVCHPKNFDFYMCAHAGMIGTTRP 181
KW PKFTVIVAQKN HT+FFQT SP+NV PGTVVD +VCHPKNFDFYMCAHAGMIGT+RP
Sbjct: 94 KWEPKFTVIVAQKNHHTRFFQTNSPENVPPGTVVDKQVCHPKNFDFYMCAHAGMIGTSRP 273
Query: 182 THYHVLHDEIGFNADEMQEFVHSLSYVYQRSTTAISVVAPVCYAHLAAAQVSTFLRLEEM 361
THYHVLHDEIGF+ADE+QEFVHSLSYVYQRSTTAISV AP+ YAHLAAAQV TF++ E+M
Sbjct: 274 THYHVLHDEIGFSADELQEFVHSLSYVYQRSTTAISVAAPIAYAHLAAAQVGTFMKFEDM 453
Query: 362 SDASSSQGGGHTSAGSAPVPELPRLHDKVRSSMFFC* 472
SD SSSQGGGHTS GSA VPELPRLH+KV+SSMFFC*
Sbjct: 454 SDTSSSQGGGHTSVGSASVPELPRLHEKVKSSMFFC* 564
Score = 252 bits (544), Expect = 2e-066
Identities = 116/155 (74%), Positives = 123/155 (79%)
Frame = -1 / -3
Query: 468 QKNMELLTLSCRRGSSGTGALPAEVCPPPWLEDASDISSNLRNVLTWAAARWA*HTGATT 289
QKNMEL T SC RGSSGT ALP +V PPPWL++ SD+SSN V T AAAR A GA T
Sbjct: 560 QKNMELFTFSCSRGSSGTEALPTDVWPPPWLDEVSDMSSNFMKVPTCAAARCAYAIGAAT 381
Query: 288 EMAVVLLWYT*ESE*TNSCISSALKPISSCRT**WVGLVVPIIPACAHM*KSKFLGWQTL 109
E+AVVLLWYT*ESE TNS SSALKPISSCRT * VGL VPIIPACAHM*KSKFLGW T
Sbjct: 380 EIAVVLLWYT*ESEWTNSWSSSALKPISSCRTW*CVGLDVPIIPACAHM*KSKFLGWHTC 201
Query: 108 LSTTVPGRTLSGDAV*KNLVWXFF*ATITVNLGDH 4
LSTTVPG T SG+ V KNLV FF*AT+TVNLG H
Sbjct: 200 LSTTVPGGTFSGEFVWKNLV*WFF*ATMTVNLGSH 96
Score = 184 bits (397), Expect = 4e-046
Identities = 85/156 (54%), Positives = 110/156 (70%)
Frame = -3 / -2
Query: 469 AEEHGAPDFVMQARQLRHRSTASRGMPSSLAGGRV*HLLQSQERAHLGCSEVGVAHWSNH 290
AEEHGA F+MQ RQLRHR A R + SLA V H+L+ E AHL ++ V +WS++
Sbjct: 561 AEEHGALHFLMQPRQLRHRGAAHRRVAPSLARRSVRHVLKLHEGAHLRRRQMRVRYWSSY 382
Query: 289 *DGCRAPLVHVRERMNKLLHLVGIETYLVVQNMIVGGPCCSNHPSMCTHVEVEVLRMANF 110
*+ RAPLVH+R+R++KLL LV E L++QNM++ P +NHPSM THVEV+VL MA+
Sbjct: 381 *NRRRAPLVHIRKRVDKLLELVRAEANLIMQNMVMRWPRRANHPSMRTHVEVKVLGMAHL 202
Query: 109 TIHHSSRKNIVW*CRLKELGVXVLLSNNHSELG*PL 2
IHH +R+NI W L++ GV VLLSNN ELG PL
Sbjct: 201 FIHHRTRRNIFWRICLEKSGVMVLLSNNDCELGLPL 94
Score = 182 bits (393), Expect = 1e-045
Identities = 82/157 (52%), Positives = 100/157 (63%)
Frame = +1 / +3
Query: 1 EVVTQVHCDCCSKEPPHQVLSDGITRQCSSWNCGG**SLPS*ELRLLHVCTCWDDWNNKA 180
+V QVH CCS+EP HQ+ D R+CSSW GG* S+PS EL LLHVC CWDDW+ +A
Sbjct: 93 QVGAQVHSHCCSEEPSHQIFPDKFARKCSSWYGGG*TSVPSQEL*LLHVCACWDDWHVEA 272
Query: 181 HPLSCSARRDRFQCRRDAGVCSFALLRVPEEHDSHLSGCSSVLRPPRCSPGEHVPEIGGD 360
+ L CSA D Q R GVC A L VPEEHD S CS+ +R H+ E+ G
Sbjct: 273 NALPCSA**DWLQRGRAPGVCPLAFLCVPEEHDGDFSSCSNSVRASGGGASGHLHEV*GH 452
Query: 361 VRRVLQPGRRAYLGWQCSCAGAASPA*QSQELHVLLL 471
V ++PGR ++G Q AGAAS A*+S+ELHVLLL
Sbjct: 453 VGHFVEPGRGPHVGGQRLGAGAASAA*ESEELHVLLL 563
Score = 156 bits (335), Expect = 1e-037
Identities = 75/148 (50%), Positives = 85/148 (57%)
Frame = -2 / -1
Query: 446 LCHAGEAAPAQEHCQPRYALLPGWRTRLTSPPISGTCSPGLQRGGRSTLEQPLRWLSCSS 267
L HA EAAPA C P LPG T P S C R+ LEQ L+ SCSS
Sbjct: 538 LSHAAEAAPAPRRCPPTCGPLPGSTKCPTCPQTS*RCPLAPPPDARTLLEQLLKSPSCSS 359
Query: 266 GTRKRANEQTPASRRH*NLSRRAEHDSGWALLFQSSQHVHTCRSRSS*DGKLYYPPQFQE 87
GT K+A+ QTP +R *+ S AEH + A QSSQH HTCRS+SS DG L YPP +QE
Sbjct: 358 GTHKKASGQTPGARPR*SQSHHAEHGNALASTCQSSQHAHTCRSQSSWDGTLVYPPPYQE 179
Query: 86 EHCLVMPSERTWCGGSFEQQSQ*TWVTT 3
EH L S + WC GS EQQ *TW T
Sbjct: 178 EHFLANLSGKIWCDGSSEQQ*L*TWAPT 95
Score = 134 bits (288), Expect = 4e-031
Identities = 72/148 (48%), Positives = 80/148 (54%)
Frame = +3 / +2
Query: 3 SGHPXXXXXXXKRTXTPSSFRRHHQTMFFLELWWIVKFAILRTSTSTCVHMLG*LEQQGP 182
SG P +RT TP R+ Q MF L WWI K AI RT TSTCV MLG*L ++G
Sbjct: 95 SGSPSSQSLLLRRTITPDFSRQIRQKMFLLVRWWINKCAIPRTLTSTCVRMLG*LARRGQ 274
Query: 183 PTIMFCTTR*VSMPTRCRSLFIRSLTCTRGARQPSQWLLQCATPTSLQPR*ARS*DWRRC 362
MFC R S T RSL R L CTRGAR+ Q LLQ T + + A S* R C
Sbjct: 275 RITMFCMMRLASARTSSRSLSTRFLMCTRGARRRFQ*LLQ*RTRIWRRRKWAPS*SLRTC 454
Query: 363 QTRPPAREEGIPRLAVLLCRSCLACMTK 446
+T ARE R A CRSCL CM K
Sbjct: 455 RTLRRAREGATRRWAAPRCRSCLGCMRK 538
>gb|BF629097.2|BF629097 HVSMEb0009N21f Hordeum vulgare seedling shoot EST library
HVcDNA0002 (Dehydration stress) Hordeum vulgare subsp.
vulgare cDNA clone HVSMEb0009N21f, mRNA sequence
Length = 727
Score = 320 bits (694), Expect = 4e-087
Identities = 126/156 (80%), Positives = 138/156 (88%)
Frame = +2 / +2
Query: 2 KWSPKFTVIVAQKNXHTKFFQTASPDNVLPGTVVDSKVCHPKNFDFYMCAHAGMIGTTRP 181
KW PKFTVIVAQKN HT+FFQT SP+NV PGTVVD +VCHPKNFDFYMCAHAGMIGT+RP
Sbjct: 257 KWEPKFTVIVAQKNHHTRFFQTNSPENVPPGTVVDKQVCHPKNFDFYMCAHAGMIGTSRP 436
Query: 182 THYHVLHDEIGFNADEMQEFVHSLSYVYQRSTTAISVVAPVCYAHLAAAQVSTFLRLEEM 361
THYHVLHDEIGF+ADE+QEFVHSLSYVYQRSTTAISV AP+ YAH+AAA V TF++ E+M
Sbjct: 437 THYHVLHDEIGFSADELQEFVHSLSYVYQRSTTAISVAAPIAYAHMAAAHVGTFMKFEDM 616
Query: 362 SDASSSQGGGHTSAGSAPVPELPRLHDKVRSSMFFC 469
SD SSS GGGHTS GSA VPEL LH+KV S MFFC
Sbjct: 617 SDTSSSHGGGHTSVGSASVPELASLHEKVMSFMFFC 724
Score = 242 bits (523), Expect = 2e-063
Identities = 112/155 (72%), Positives = 121/155 (78%)
Frame = -1 / -2
Query: 468 QKNMELLTLSCRRGSSGTGALPAEVCPPPWLEDASDISSNLRNVLTWAAARWA*HTGATT 289
QKNM+L+T SC SSGT ALP +V PPPWL++ SD+SSN V T AAA A GA T
Sbjct: 723 QKNMKLITFSCSEASSGTEALPTDVWPPPWLDEVSDMSSNFMKVPTCAAAICAYAIGAAT 544
Query: 288 EMAVVLLWYT*ESE*TNSCISSALKPISSCRT**WVGLVVPIIPACAHM*KSKFLGWQTL 109
E+AVVLLWYT*ESE TNS SSALKPISSCRT * VGL VPIIPACAHM*KSKFLGW T
Sbjct: 543 EIAVVLLWYT*ESECTNSWSSSALKPISSCRTW*CVGLDVPIIPACAHM*KSKFLGWHTC 364
Query: 108 LSTTVPGRTLSGDAV*KNLVWXFF*ATITVNLGDH 4
LSTTVPG T SG+ V KNLV FF*AT+TVNLG H
Sbjct: 363 LSTTVPGGTFSGEFVWKNLV*WFF*ATMTVNLGSH 259
Score = 173 bits (372), Expect = 1e-042
Identities = 79/157 (50%), Positives = 97/157 (61%)
Frame = +1 / +1
Query: 1 EVVTQVHCDCCSKEPPHQVLSDGITRQCSSWNCGG**SLPS*ELRLLHVCTCWDDWNNKA 180
+V QVH CCS+EP HQ+ D R+CSSW GG* S+PS EL LLHVC CWDDW+ +A
Sbjct: 256 QVGAQVHSHCCSEEPSHQIFPDKFARKCSSWYGGG*TSVPSQEL*LLHVCACWDDWHVEA 435
Query: 181 HPLSCSARRDRFQCRRDAGVCSFALLRVPEEHDSHLSGCSSVLRPPRCSPGEHVPEIGGD 360
+ L CSA D Q R GVC+ A L VPEEHD S CS+ +R H+ E+ G
Sbjct: 436 NALPCSA**DWLQRGRAPGVCALAFLCVPEEHDGDFSSCSNSVRAYGGGARGHLHEV*GH 615
Query: 361 VRRVLQPGRRAYLGWQCSCAGAASPA*QSQELHVLLL 471
V ++P R ++G Q AGA A*+S ELHVLLL
Sbjct: 616 VGHFVEPWRGPHVGGQRLSAGAXLAA*KSDELHVLLL 726
Score = 167 bits (359), Expect = 7e-041
Identities = 79/156 (50%), Positives = 104/156 (66%)
Frame = -3 / -1
Query: 469 AEEHGAPDFVMQARQLRHRSTASRGMPSSLAGGRV*HLLQSQERAHLGCSEVGVAHWSNH 290
AEEH A F MQ LRH A R + S+A V H+L+ E AH+ + V +WS++
Sbjct: 724 AEEHEAHHFFMQRGXLRH*GAAHRRVAPSMARRSVRHVLKLHEGAHVRRRHMRVRYWSSY 545
Query: 289 *DGCRAPLVHVRERMNKLLHLVGIETYLVVQNMIVGGPCCSNHPSMCTHVEVEVLRMANF 110
*+ RAPLVH+R+R++KLL LV E L++QNM++ P +NHPSM THVEV+VL MA+
Sbjct: 544 *NRRRAPLVHIRKRVHKLLELVRAEANLIMQNMVMRWPRRANHPSMRTHVEVKVLGMAHL 365
Query: 109 TIHHSSRKNIVW*CRLKELGVXVLLSNNHSELG*PL 2
IHH +R+NI W L++ GV VLLSNN ELG PL
Sbjct: 364 FIHHRTRRNIFWRICLEKSGVMVLLSNNDCELGLPL 257
Score = 147 bits (315), Expect = 8e-035
Identities = 72/148 (48%), Positives = 82/148 (55%)
Frame = -2 / -3
Query: 446 LCHAGEAAPAQEHCQPRYALLPGWRTRLTSPPISGTCSPGLQRGGRSTLEQPLRWLSCSS 267
L HA APA C P L G T P S C R+ LEQ L+ SCSS
Sbjct: 701 LFHAARXAPALRRCPPTCGPLHGSTKCPTCPQTS*RCPRAPPPYARTLLEQLLKSPSCSS 522
Query: 266 GTRKRANEQTPASRRH*NLSRRAEHDSGWALLFQSSQHVHTCRSRSS*DGKLYYPPQFQE 87
GT K+A+ QTP +R *+ S AEH + A QSSQH HTCRS+SS DG L YPP +QE
Sbjct: 521 GTHKKASAQTPGARPR*SQSHHAEHGNALASTCQSSQHAHTCRSQSSWDGTLVYPPPYQE 342
Query: 86 EHCLVMPSERTWCGGSFEQQSQ*TWVTT 3
EH L S + WC GS EQQ *TW T
Sbjct: 341 EHFLANLSGKIWCDGSSEQQ*L*TWAPT 258
Score = 122 bits (260), Expect = 3e-027
Identities = 69/148 (46%), Positives = 76/148 (51%)
Frame = +3 / +3
Query: 3 SGHPXXXXXXXKRTXTPSSFRRHHQTMFFLELWWIVKFAILRTSTSTCVHMLG*LEQQGP 182
SG P +RT TP R+ Q MF L WWI K AI RT TSTCV MLG*L ++G
Sbjct: 258 SGSPSSQSLLLRRTITPDFSRQIRQKMFLLVRWWINKCAIPRTLTSTCVRMLG*LARRGQ 437
Query: 183 PTIMFCTTR*VSMPTRCRSLFIRSLTCTRGARQPSQWLLQCATPTSLQPR*ARS*DWRRC 362
MFC R S T RSL R L CTRGAR+ Q LLQ T + A S* R C
Sbjct: 438 RITMFCMMRLASARTSSRSLCTRFLMCTRGARRRFQ*LLQ*RTRIWRRRTWAPS*SLRTC 617
Query: 363 QTRPPAREEGIPRLAVLLCRSCLACMTK 446
+T A E R A CRS CM K
Sbjct: 618 RTLRRAMEGATRRWAAPQCRSXPRCMKK 701
>gb|CA031166.1|CA031166 HX09D06r HX Hordeum vulgare subsp. vulgare cDNA clone HX09D06
5-PRIME, mRNA sequence
Length = 647
Score = 305 bits (660), Expect = 2e-082
Identities = 120/158 (75%), Positives = 137/158 (86%)
Frame = +2 / +1
Query: 20 TVIVAQKNXHTKFFQTASPDNVLPGTVVDSKVCHPKNFDFYMCAHAGMIGTTRPTHYHVL 199
T+IVAQKN HTKFF SPDNV PGTVVD+ VCHP+N+DFYMCAHAGMIGTTRPTHYH+L
Sbjct: 40 TLIVAQKNHHTKFFMPGSPDNVPPGTVVDNAVCHPRNYDFYMCAHAGMIGTTRPTHYHIL 219
Query: 200 HDEIGFNADEMQEFVHSLSYVYQRSTTAISVVAPVCYAHLAAAQVSTFLRLEEMSDASSS 379
HDEI F AD++Q+ VHSLSYVYQRSTTAISVV+P+CYAHLAAAQV+ F++ +EMS+ SSS
Sbjct: 220 HDEIHFAADDLQDLVHSLSYVYQRSTTAISVVSPICYAHLAAAQVAQFIKFDEMSETSSS 399
Query: 380 QGGGHTSAGSAPVPELPRLHDKVRSSMFFC*LMCVRIR 493
QGGGHTS S PV ELPRLH+KVRSSMFFC* + R
Sbjct: 400 QGGGHTSTASGPVQELPRLHEKVRSSMFFC*ALVALAR 513
Score = 226 bits (489), Expect = 8e-059
Identities = 110/150 (73%), Positives = 114/150 (76%)
Frame = -1 / -1
Query: 468 QKNMELLTLSCRRGSSGTGALPAEVCPPPWLEDASDISSNLRNVLTWAAARWA*HTGATT 289
QKNM L T S RRGSS TG L EV PPPWL+D SDISSN N T AAAR A* G TT
Sbjct: 488 QKNMLLRTFSWRRGSSCTGPLAVEVWPPPWLDDVSDISSNFMNCAT*AAARCA*QIGETT 309
Query: 288 EMAVVLLWYT*ESE*TNSCISSALKPISSCRT**WVGLVVPIIPACAHM*KSKFLGWQTL 109
++AVVLLWYT*ESE T SC SSA K ISSCR * VGLVVPIIPA AHM*KS FLGWQT
Sbjct: 308 DIAVVLLWYT*ESECTRSCRSSAAKCISSCRIW*CVGLVVPIIPA*AHM*KS*FLGWQTA 129
Query: 108 LSTTVPGRTLSGDAV*KNLVWXFF*ATITV 19
LSTTVPG TLSGD KN VW FF*ATI+V
Sbjct: 128 LSTTVPGGTLSGDPGMKNFVW*FF*ATISV 39
Score = 161 bits (347), Expect = 3e-039
Identities = 70/153 (45%), Positives = 105/153 (68%)
Frame = -3 / -3
Query: 469 AEEHGAPDFVMQARQLRHRSTASRGMPSSLAGGRV*HLLQSQERAHLGCSEVGVAHWSNH 290
AEEH A DF+M+ RQL HR+ SRG+ ++LA R+ HL++ E HL ++ +A W N+
Sbjct: 489 AEEHAAADFLMETRQLLHRAAGSRGVATTLARRRLGHLIKLYELRHLSSCKMCIADWRNN 310
Query: 289 *DGCRAPLVHVRERMNKLLHLVGIETYLVVQNMIVGGPCCSNHPSMCTHVEVEVLRMANF 110
* C APLVH+RERM+K+L ++ + YL++Q+M++ PCC NH SM HV+V + MA+
Sbjct: 309 *YCCCAPLVHIRERMHKILQVIRGKVYLIMQDMVMCWPCCPNHSSMSAHVKVIIPWMADS 130
Query: 109 TIHHSSRKNIVW*CRLKELGVXVLLSNNHSELG 11
I++S+R++IV R ++L V +LLSNN G
Sbjct: 129 IINNSARRDIVRRSRHEKLCVVILLSNNQCNWG 31
Score = 111 bits (236), Expect = 6e-024
Identities = 61/141 (43%), Positives = 74/141 (52%)
Frame = -2 / -2
Query: 446 LCHAGEAAPAQEHCQPRYALLPGWRTRLTSPPISGTCSPGLQRGGRSTLEQPLRWLSCSS 267
L H EAAPA Q R PG T TS T P + S LE+ L L CS
Sbjct: 466 LSHGDEAAPAPGRWQ*RCGHHPGSTTSRTSHQTL*TAPPEQLQDVHSRLEKQLILLLCSF 287
Query: 266 GTRKRANEQTPASRRH*NLSRRAEHDSGWALLFQSSQHVHTCRSRSS*DGKLYYPPQFQE 87
GT KRAN Q PA ++S A + + ALL QS QH TC+S +S DG+ +Y Q QE
Sbjct: 286 GTHKRANAQDPAGHPRQSVSHHAGYGNVLALLSQSFQHERTCKSHNSLDGRQHYQQQCQE 107
Query: 86 EHCLVMPSERTWCGGSFEQQS 24
HC + + +T CG S EQQS
Sbjct: 106 GHCQEIQA*KTLCGDSSEQQS 44
Score = 80.3 bits (169), Expect(2) = 4e-029
Identities = 32/57 (56%), Positives = 41/57 (71%)
Frame = +1 / +3
Query: 19 HCDCCSKEPPHQVLSDGITRQCSSWNCGG**SLPS*ELRLLHVCTCWDDWNNKAHPL 189
+ DCCS+E PH+V I+ QC SW+C * LPS EL LLHV +CW+DW+NKA+ L
Sbjct: 39 YTDCCSEESPHKVFHAWIS*QCPSWHCC**CCLPSKEL*LLHVRSCWNDWDNKANTL 209
Score = 67.5 bits (141), Expect(2) = 4e-029
Identities = 38/84 (45%), Positives = 53/84 (63%)
Frame = +1 / +3
Query: 232 AGVCSFALLRVPEEHDSHLSGCSSVLRPPRCSPGEHVPEIGGDVRRVLQPGRRAYLGWQC 411
AG C+FALL VP+EH+S++S S++L G V ++ DVR V++PG +L Q
Sbjct: 252 AGSCAFALLCVPKEHNSNISCFSNLLCTSCSCSGGAVHKV**DVRDVVEPGWWPHLYCQR 431
Query: 412 SCAGAASPA*QSQELHVLLLADVR 483
AGAAS *+S + HVLLL+ R
Sbjct: 432 PGAGAASSP*ESPQQHVLLLSASR 503
>gb|CB876456.1|CB876456 HX11F07w HX Hordeum vulgare subsp. vulgare cDNA clone HX11F07
3-PRIME, mRNA sequence
Length = 641
Score = 305 bits (660), Expect = 2e-082
Identities = 120/158 (75%), Positives = 137/158 (86%)
Frame = +2 / -2
Query: 20 TVIVAQKNXHTKFFQTASPDNVLPGTVVDSKVCHPKNFDFYMCAHAGMIGTTRPTHYHVL 199
T+IVAQKN HTKFF SPDNV PGTVVD+ VCHP+N+DFYMCAHAGMIGTTRPTHYH+L
Sbjct: 640 TLIVAQKNHHTKFFMPGSPDNVPPGTVVDNAVCHPRNYDFYMCAHAGMIGTTRPTHYHIL 461
Query: 200 HDEIGFNADEMQEFVHSLSYVYQRSTTAISVVAPVCYAHLAAAQVSTFLRLEEMSDASSS 379
HDEI F AD++Q+ VHSLSYVYQRSTTAISVV+P+CYAHLAAAQV+ F++ +EMS+ SSS
Sbjct: 460 HDEIHFAADDLQDLVHSLSYVYQRSTTAISVVSPICYAHLAAAQVAQFIKFDEMSETSSS 281
Query: 380 QGGGHTSAGSAPVPELPRLHDKVRSSMFFC*LMCVRIR 493
QGGGHTS S PV ELPRLH+KVRSSMFFC* + R
Sbjct: 280 QGGGHTSTASGPVQELPRLHEKVRSSMFFC*ALVALAR 167
Score = 226 bits (489), Expect = 8e-059
Identities = 110/150 (73%), Positives = 114/150 (76%)
Frame = -1 / +3
Query: 468 QKNMELLTLSCRRGSSGTGALPAEVCPPPWLEDASDISSNLRNVLTWAAARWA*HTGATT 289
QKNM L T S RRGSS TG L EV PPPWL+D SDISSN N T AAAR A* G TT
Sbjct: 192 QKNMLLRTFSWRRGSSCTGPLAVEVWPPPWLDDVSDISSNFMNCAT*AAARCA*QIGETT 371
Query: 288 EMAVVLLWYT*ESE*TNSCISSALKPISSCRT**WVGLVVPIIPACAHM*KSKFLGWQTL 109
++AVVLLWYT*ESE T SC SSA K ISSCR * VGLVVPIIPA AHM*KS FLGWQT
Sbjct: 372 DIAVVLLWYT*ESECTRSCRSSAAKCISSCRIW*CVGLVVPIIPA*AHM*KS*FLGWQTA 551
Query: 108 LSTTVPGRTLSGDAV*KNLVWXFF*ATITV 19
LSTTVPG TLSGD KN VW FF*ATI+V
Sbjct: 552 LSTTVPGGTLSGDPGMKNFVW*FF*ATISV 641
Score = 160 bits (344), Expect = 8e-039
Identities = 69/148 (46%), Positives = 104/148 (70%)
Frame = -3 / +2
Query: 469 AEEHGAPDFVMQARQLRHRSTASRGMPSSLAGGRV*HLLQSQERAHLGCSEVGVAHWSNH 290
AEEH A DF+M+ RQL HR+ SRG+ ++LA R+ HL++ E HL ++ +A W N+
Sbjct: 191 AEEHAAADFLMETRQLLHRAAGSRGVATTLARRRLGHLIKLYELRHLSSCKMCIADWRNN 370
Query: 289 *DGCRAPLVHVRERMNKLLHLVGIETYLVVQNMIVGGPCCSNHPSMCTHVEVEVLRMANF 110
* C APLVH+RERM+K+L ++ + YL++Q+M++ PCC NH SM HV+V + MA+
Sbjct: 371 *YCCCAPLVHIRERMHKILQVIRGKVYLIMQDMVMCWPCCPNHSSMSAHVKVIIPWMADS 550
Query: 109 TIHHSSRKNIVW*CRLKELGVXVLLSNN 26
I++S+R++IV R ++L V +LLSNN
Sbjct: 551 IINNSARRDIVRRSRHEKLCVVILLSNN 634
Score = 111 bits (236), Expect = 6e-024
Identities = 61/141 (43%), Positives = 74/141 (52%)
Frame = -2 / +1
Query: 446 LCHAGEAAPAQEHCQPRYALLPGWRTRLTSPPISGTCSPGLQRGGRSTLEQPLRWLSCSS 267
L H EAAPA Q R PG T TS T P + S LE+ L L CS
Sbjct: 214 LSHGDEAAPAPGRWQ*RCGHHPGSTTSRTSHQTL*TAPPEQLQDVHSRLEKQLILLLCSF 393
Query: 266 GTRKRANEQTPASRRH*NLSRRAEHDSGWALLFQSSQHVHTCRSRSS*DGKLYYPPQFQE 87
GT KRAN Q PA ++S A + + ALL QS QH TC+S +S DG+ +Y Q QE
Sbjct: 394 GTHKRANAQDPAGHPRQSVSHHAGYGNVLALLSQSFQHERTCKSHNSLDGRQHYQQQCQE 573
Query: 86 EHCLVMPSERTWCGGSFEQQS 24
HC + + +T CG S EQQS
Sbjct: 574 GHCQEIQA*KTLCGDSSEQQS 636
Score = 83.1 bits (175), Expect(2) = 7e-030
Identities = 33/57 (57%), Positives = 41/57 (71%)
Frame = +1 / -1
Query: 19 HCDCCSKEPPHQVLSDGITRQCSSWNCGG**SLPS*ELRLLHVCTCWDDWNNKAHPL 189
H DCCS+E PH+V I+ QC SW+C * LPS EL LLHV +CW+DW+NKA+ L
Sbjct: 641 HTDCCSEESPHKVFHAWIS*QCPSWHCC**CCLPSKEL*LLHVRSCWNDWDNKANTL 471
Score = 67.5 bits (141), Expect(2) = 7e-030
Identities = 38/84 (45%), Positives = 53/84 (63%)
Frame = +1 / -1
Query: 232 AGVCSFALLRVPEEHDSHLSGCSSVLRPPRCSPGEHVPEIGGDVRRVLQPGRRAYLGWQC 411
AG C+FALL VP+EH+S++S S++L G V ++ DVR V++PG +L Q
Sbjct: 428 AGSCAFALLCVPKEHNSNISCFSNLLCTSCSCSGGAVHKV**DVRDVVEPGWWPHLYCQR 249
Query: 412 SCAGAASPA*QSQELHVLLLADVR 483
AGAAS *+S + HVLLL+ R
Sbjct: 248 PGAGAASSP*ESPQQHVLLLSASR 177
>gb|BU985772.1|BU985772 HF08J07r HF Hordeum vulgare subsp. vulgare cDNA clone HF08J07
5-PRIME, mRNA sequence
Length = 493
Score = 302 bits (654), Expect = 1e-081
Identities = 119/141 (84%), Positives = 129/141 (91%)
Frame = +2 / +1
Query: 2 KWSPKFTVIVAQKNXHTKFFQTASPDNVLPGTVVDSKVCHPKNFDFYMCAHAGMIGTTRP 181
KW PKFTVIVAQKN HT+FFQT SP+NV PGTVVD +VCHPKNFDFYMCAHAGMIGT+RP
Sbjct: 70 KWEPKFTVIVAQKNHHTRFFQTNSPENVPPGTVVDKQVCHPKNFDFYMCAHAGMIGTSRP 249
Query: 182 THYHVLHDEIGFNADEMQEFVHSLSYVYQRSTTAISVVAPVCYAHLAAAQVSTFLRLEEM 361
THYHVLHDEIGF+ADE+QEFVHSLSYVYQRSTTAISV AP+ YAHLAAAQV TF++ E+M
Sbjct: 250 THYHVLHDEIGFSADELQEFVHSLSYVYQRSTTAISVAAPIAYAHLAAAQVGTFMKFEDM 429
Query: 362 SDASSSQGGGHTSAGSAPVPE 424
SD SSSQGGGHTS GSA VPE
Sbjct: 430 SDTSSSQGGGHTSVGSASVPE 492
Score = 223 bits (482), Expect = 7e-058
Identities = 104/140 (74%), Positives = 111/140 (79%)
Frame = -1 / -3
Query: 423 SGTGALPAEVCPPPWLEDASDISSNLRNVLTWAAARWA*HTGATTEMAVVLLWYT*ESE* 244
SGT ALP +V PPPWL++ SD+SSN V T AAAR A GA TE+AVVLLWYT*ESE
Sbjct: 491 SGTEALPTDVWPPPWLDEVSDMSSNFMKVPTCAAARCAYAIGAATEIAVVLLWYT*ESEW 312
Query: 243 TNSCISSALKPISSCRT**WVGLVVPIIPACAHM*KSKFLGWQTLLSTTVPGRTLSGDAV 64
TNS SSALKPISSCRT * VGL VPIIPACAHM*KSKFLGW T LSTTVPG T SG+ V
Sbjct: 311 TNSWSSSALKPISSCRTW*CVGLDVPIIPACAHM*KSKFLGWHTCLSTTVPGGTFSGEFV 132
Query: 63 *KNLVWXFF*ATITVNLGDH 4
KNLV FF*AT+TVNLG H
Sbjct: 131 WKNLV*WFF*ATMTVNLGSH 72
Score = 160 bits (343), Expect = 1e-038
Identities = 74/141 (52%), Positives = 98/141 (69%)
Frame = -3 / -2
Query: 424 LRHRSTASRGMPSSLAGGRV*HLLQSQERAHLGCSEVGVAHWSNH*DGCRAPLVHVRERM 245
LRHR A R + SLA V H+L+ E AHL ++ V +WS++*+ RAPLVH+R+R+
Sbjct: 492 LRHRGAAHRRVAPSLARRSVRHVLKLHEGAHLRRRQMRVRYWSSY*NRRRAPLVHIRKRV 313
Query: 244 NKLLHLVGIETYLVVQNMIVGGPCCSNHPSMCTHVEVEVLRMANFTIHHSSRKNIVW*CR 65
+KLL LV E L++QNM++ P +NHPSM THVEV+VL MA+ IHH +R+NI W
Sbjct: 312 DKLLELVRAEANLIMQNMVMRWPRRANHPSMRTHVEVKVLGMAHLFIHHRTRRNIFWRIC 133
Query: 64 LKELGVXVLLSNNHSELG*PL 2
L++ GV VLLSNN ELG PL
Sbjct: 132 LEKSGVMVLLSNNDCELGLPL 70
Score = 159 bits (342), Expect = 1e-038
Identities = 70/141 (49%), Positives = 86/141 (60%)
Frame = +1 / +3
Query: 1 EVVTQVHCDCCSKEPPHQVLSDGITRQCSSWNCGG**SLPS*ELRLLHVCTCWDDWNNKA 180
+V QVH CCS+EP HQ+ D R+CSSW GG* S+PS EL LLHVC CWDDW+ +A
Sbjct: 69 QVGAQVHSHCCSEEPSHQIFPDKFARKCSSWYGGG*TSVPSQEL*LLHVCACWDDWHVEA 248
Query: 181 HPLSCSARRDRFQCRRDAGVCSFALLRVPEEHDSHLSGCSSVLRPPRCSPGEHVPEIGGD 360
+ L CSA D Q R GVC A L VPEEHD S CS+ +R G H+ E+ G
Sbjct: 249 NALPCSA**DWLQRGRAPGVCPLAFLCVPEEHDGDFSSCSNSVRASGGGAGGHLHEV*GH 428
Query: 361 VRRVLQPGRRAYLGWQCSCAG 423
V ++PGR ++G Q AG
Sbjct: 429 VGHFVEPGRGPHVGGQRLGAG 491
Score = 149 bits (321), Expect = 1e-035
Identities = 71/141 (50%), Positives = 81/141 (57%)
Frame = -2 / -1
Query: 425 APAQEHCQPRYALLPGWRTRLTSPPISGTCSPGLQRGGRSTLEQPLRWLSCSSGTRKRAN 246
APA C P LPG T P S C P R+ LEQ L+ SCSSGT K+A+
Sbjct: 493 APAPRRCPPTCGPLPGSTKCPTCPQTS*RCPPAPPPDARTLLEQLLKSPSCSSGTHKKAS 314
Query: 245 EQTPASRRH*NLSRRAEHDSGWALLFQSSQHVHTCRSRSS*DGKLYYPPQFQEEHCLVMP 66
QTP +R *+ S AEH + A QSSQH HTCRS+SS DG L YPP +QEEH L
Sbjct: 313 GQTPGARPR*SQSHHAEHGNALASTCQSSQHAHTCRSQSSWDGTLVYPPPYQEEHFLANL 134
Query: 65 SERTWCGGSFEQQSQ*TWVTT 3
S + WC GS EQQ *TW T
Sbjct: 133 SGKIWCDGSSEQQ*L*TWAPT 71
Score = 122 bits (260), Expect = 3e-027
Identities = 68/141 (48%), Positives = 75/141 (53%)
Frame = +3 / +2
Query: 3 SGHPXXXXXXXKRTXTPSSFRRHHQTMFFLELWWIVKFAILRTSTSTCVHMLG*LEQQGP 182
SG P +RT TP R+ Q MF L WWI K AI RT TSTCV MLG*L ++G
Sbjct: 71 SGSPSSQSLLLRRTITPDFSRQIRQKMFLLVRWWINKCAIPRTLTSTCVRMLG*LARRGQ 250
Query: 183 PTIMFCTTR*VSMPTRCRSLFIRSLTCTRGARQPSQWLLQCATPTSLQPR*ARS*DWRRC 362
MFC R S T RSL R L CTRGAR+ Q LLQ T + R A S* R C
Sbjct: 251 RITMFCMMRLASARTSSRSLSTRFLMCTRGARRRFQ*LLQ*RTRIWRRRRWAPS*SLRTC 430
Query: 363 QTRPPAREEGIPRLAVLLCRS 425
+T ARE R A CRS
Sbjct: 431 RTLRRAREGATRRWAAPRCRS 493
>gb|BU969384.1|BU969384 HB11G01r BC Hordeum vulgare subsp. vulgare cDNA clone HB11G01
5-PRIME, mRNA sequence
Length = 548
Score = 300 bits (650), Expect = 5e-081
Identities = 118/155 (76%), Positives = 134/155 (86%)
Frame = +2 / +3
Query: 29 VAQKNXHTKFFQTASPDNVLPGTVVDSKVCHPKNFDFYMCAHAGMIGTTRPTHYHVLHDE 208
VAQKN HTKFF SPDNV PGTVVD+ VCHP+N+DFYMCAHAGMIGTTRPTHYH+LHDE
Sbjct: 12 VAQKNHHTKFFMPGSPDNVPPGTVVDNAVCHPRNYDFYMCAHAGMIGTTRPTHYHILHDE 191
Query: 209 IGFNADEMQEFVHSLSYVYQRSTTAISVVAPVCYAHLAAAQVSTFLRLEEMSDASSSQGG 388
I F AD++Q+ VHSLSYVYQRSTTAISVV+P+CYAHLAAAQV+ F++ +EMS+ SSSQGG
Sbjct: 192 IHFAADDLQDLVHSLSYVYQRSTTAISVVSPICYAHLAAAQVAQFIKFDEMSETSSSQGG 371
Query: 389 GHTSAGSAPVPELPRLHDKVRSSMFFC*LMCVRIR 493
GHTS S PV ELPRLH+KVRSSMFFC* + R
Sbjct: 372 GHTSTASGPVQELPRLHEKVRSSMFFC*ALVALAR 476
Score = 222 bits (480), Expect = 1e-057
Identities = 108/147 (73%), Positives = 111/147 (75%)
Frame = -1 / -2
Query: 468 QKNMELLTLSCRRGSSGTGALPAEVCPPPWLEDASDISSNLRNVLTWAAARWA*HTGATT 289
QKNM L T S RRGSS TG L EV PPPWL+D SDISSN N T AAAR A* G TT
Sbjct: 451 QKNMLLRTFSWRRGSSCTGPLAVEVWPPPWLDDVSDISSNFMNCAT*AAARCA*QIGETT 272
Query: 288 EMAVVLLWYT*ESE*TNSCISSALKPISSCRT**WVGLVVPIIPACAHM*KSKFLGWQTL 109
++AVVLLWYT*ESE T SC SSA K ISSCR * VGLVVPIIPA AHM*KS FLGWQT
Sbjct: 271 DIAVVLLWYT*ESECTRSCRSSAAKCISSCRIW*CVGLVVPIIPA*AHM*KS*FLGWQTA 92
Query: 108 LSTTVPGRTLSGDAV*KNLVWXFF*AT 28
LSTTVPG TLSGD KN VW FF*AT
Sbjct: 91 LSTTVPGGTLSGDPGMKNFVW*FF*AT 11
Score = 157 bits (338), Expect = 5e-038
Identities = 68/147 (46%), Positives = 103/147 (70%)
Frame = -3 / -1
Query: 469 AEEHGAPDFVMQARQLRHRSTASRGMPSSLAGGRV*HLLQSQERAHLGCSEVGVAHWSNH 290
AEEH A DF+M+ RQL HR+ SRG+ ++LA R+ HL++ E HL ++ +A W N+
Sbjct: 452 AEEHAAADFLMETRQLLHRAAGSRGVATTLARRRLGHLIKLYELRHLSSCKMCIADWRNN 273
Query: 289 *DGCRAPLVHVRERMNKLLHLVGIETYLVVQNMIVGGPCCSNHPSMCTHVEVEVLRMANF 110
* C APLVH+RERM+K+L ++ + YL++Q+M++ PCC NH SM HV+V + MA+
Sbjct: 272 *YCCCAPLVHIRERMHKILQVIRGKVYLIMQDMVMCWPCCPNHSSMSAHVKVIIPWMADS 93
Query: 109 TIHHSSRKNIVW*CRLKELGVXVLLSN 29
I++S+R++IV R ++L V +LLSN
Sbjct: 92 IINNSARRDIVRRSRHEKLCVVILLSN 12
Score = 106 bits (227), Expect = 1e-022
Identities = 59/139 (42%), Positives = 72/139 (51%)
Frame = -2 / -3
Query: 446 LCHAGEAAPAQEHCQPRYALLPGWRTRLTSPPISGTCSPGLQRGGRSTLEQPLRWLSCSS 267
L H EAAPA Q R PG T TS T P + S LE+ L L CS
Sbjct: 429 LSHGDEAAPAPGRWQ*RCGHHPGSTTSRTSHQTL*TAPPEQLQDVHSRLEKQLILLLCSF 250
Query: 266 GTRKRANEQTPASRRH*NLSRRAEHDSGWALLFQSSQHVHTCRSRSS*DGKLYYPPQFQE 87
GT KRAN Q PA ++S A + + ALL QS QH TC+S +S DG+ +Y Q QE
Sbjct: 249 GTHKRANAQDPAGHPRQSVSHHAGYGNVLALLSQSFQHERTCKSHNSLDGRQHYQQQCQE 70
Query: 86 EHCLVMPSERTWCGGSFEQ 30
HC + + +T CG S EQ
Sbjct: 69 GHCQEIQA*KTLCGDSSEQ 13
Score = 77.1 bits (162), Expect(2) = 4e-028
Identities = 31/54 (57%), Positives = 39/54 (72%)
Frame = +1 / +2
Query: 28 CCSKEPPHQVLSDGITRQCSSWNCGG**SLPS*ELRLLHVCTCWDDWNNKAHPL 189
CCS+E PH+V I+ QC SW+C * LPS EL LLHV +CW+DW+NKA+ L
Sbjct: 11 CCSEESPHKVFHAWIS*QCPSWHCC**CCLPSKEL*LLHVRSCWNDWDNKANTL 172
Score = 67.5 bits (141), Expect(2) = 4e-028
Identities = 38/84 (45%), Positives = 53/84 (63%)
Frame = +1 / +2
Query: 232 AGVCSFALLRVPEEHDSHLSGCSSVLRPPRCSPGEHVPEIGGDVRRVLQPGRRAYLGWQC 411
AG C+FALL VP+EH+S++S S++L G V ++ DVR V++PG +L Q
Sbjct: 215 AGSCAFALLCVPKEHNSNISCFSNLLCTSCSCSGGAVHKV**DVRDVVEPGWWPHLYCQR 394
Query: 412 SCAGAASPA*QSQELHVLLLADVR 483
AGAAS *+S + HVLLL+ R
Sbjct: 395 PGAGAASSP*ESPQQHVLLLSASR 466
>gb|BU971417.1|BU971417 HB17I20r BC Hordeum vulgare subsp. vulgare cDNA clone HB17I20
5-PRIME, mRNA sequence
Length = 502
Score = 284 bits (614), Expect = 5e-076
Identities = 111/147 (75%), Positives = 127/147 (86%)
Frame = +2 / +2
Query: 53 KFFQTASPDNVLPGTVVDSKVCHPKNFDFYMCAHAGMIGTTRPTHYHVLHDEIGFNADEM 232
KFF SPDNV PGTVVD+ VCHP+N+DFYMCAHAGMIGTTRPTHYH+LHDEI F AD++
Sbjct: 11 KFFMPGSPDNVPPGTVVDNAVCHPRNYDFYMCAHAGMIGTTRPTHYHILHDEIHFAADDL 190
Query: 233 QEFVHSLSYVYQRSTTAISVVAPVCYAHLAAAQVSTFLRLEEMSDASSSQGGGHTSAGSA 412
Q+ VHSLSYVYQRSTTAISVV+P+CYAHLAAAQV+ F++ +EMS+ SSSQGGGHTS S
Sbjct: 191 QDLVHSLSYVYQRSTTAISVVSPICYAHLAAAQVAQFIKFDEMSETSSSQGGGHTSTASG 370
Query: 413 PVPELPRLHDKVRSSMFFC*LMCVRIR 493
PV ELPRLH+KVRSSMFFC* + R
Sbjct: 371 PVQELPRLHEKVRSSMFFC*ALVALAR 451
Score = 208 bits (448), Expect = 4e-053
Identities = 101/140 (72%), Positives = 105/140 (75%)
Frame = -1 / -2
Query: 468 QKNMELLTLSCRRGSSGTGALPAEVCPPPWLEDASDISSNLRNVLTWAAARWA*HTGATT 289
QKNM L T S RRGSS TG L EV PPPWL+D SDISSN N T AAAR A* G TT
Sbjct: 426 QKNMLLRTFSWRRGSSCTGPLAVEVWPPPWLDDVSDISSNFMNCAT*AAARCA*QIGETT 247
Query: 288 EMAVVLLWYT*ESE*TNSCISSALKPISSCRT**WVGLVVPIIPACAHM*KSKFLGWQTL 109
++AVVLLWYT*ESE T SC SSA K ISSCR * VGLVVPIIPA AHM*KS FLGWQT
Sbjct: 246 DIAVVLLWYT*ESECTRSCRSSAAKCISSCRIW*CVGLVVPIIPA*AHM*KS*FLGWQTA 67
Query: 108 LSTTVPGRTLSGDAV*KNLV 49
LSTTVPG TLSGD KN +
Sbjct: 66 LSTTVPGGTLSGDPGMKNFL 7
Score = 148 bits (317), Expect = 4e-035
Identities = 61/131 (46%), Positives = 93/131 (70%)
Frame = -3 / -1
Query: 469 AEEHGAPDFVMQARQLRHRSTASRGMPSSLAGGRV*HLLQSQERAHLGCSEVGVAHWSNH 290
AEEH A DF+M+ RQL HR+ SRG+ ++LA R+ HL++ E HL ++ +A W N+
Sbjct: 427 AEEHAAADFLMETRQLLHRAAGSRGVATTLARRRLGHLIKLYELRHLSSCKMCIADWRNN 248
Query: 289 *DGCRAPLVHVRERMNKLLHLVGIETYLVVQNMIVGGPCCSNHPSMCTHVEVEVLRMANF 110
* C APLVH+RERM+K+L ++ + YL++Q+M++ PCC NH SM HV+V + MA+
Sbjct: 247 *YCCCAPLVHIRERMHKILQVIRGKVYLIMQDMVMCWPCCPNHSSMSAHVKVIIPWMADS 68
Query: 109 TIHHSSRKNIV 77
I++S+R++IV
Sbjct: 67 IINNSARRDIV 35
Score = 67.5 bits (141), Expect(2) = 1e-022
Identities = 38/84 (45%), Positives = 53/84 (63%)
Frame = +1 / +1
Query: 232 AGVCSFALLRVPEEHDSHLSGCSSVLRPPRCSPGEHVPEIGGDVRRVLQPGRRAYLGWQC 411
AG C+FALL VP+EH+S++S S++L G V ++ DVR V++PG +L Q
Sbjct: 190 AGSCAFALLCVPKEHNSNISCFSNLLCTSCSCSGGAVHKV**DVRDVVEPGWWPHLYCQR 369
Query: 412 SCAGAASPA*QSQELHVLLLADVR 483
AGAAS *+S + HVLLL+ R
Sbjct: 370 PGAGAASSP*ESPQQHVLLLSASR 441
Score = 58.3 bits (121), Expect(2) = 1e-022
Identities = 25/46 (54%), Positives = 32/46 (69%)
Frame = +1 / +1
Query: 52 QVLSDGITRQCSSWNCGG**SLPS*ELRLLHVCTCWDDWNNKAHPL 189
+V I+ QC SW+C * LPS EL LLHV +CW+DW+NKA+ L
Sbjct: 10 EVFHAWIS*QCPSWHCC**CCLPSKEL*LLHVRSCWNDWDNKANTL 147
>gb|AV918379.1|AV918379 AV918379 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags20n15 3', mRNA sequence
Length = 662
Score = 281 bits (609), Expect = 2e-075
Identities = 110/146 (75%), Positives = 126/146 (86%)
Frame = +2 / -2
Query: 56 FFQTASPDNVLPGTVVDSKVCHPKNFDFYMCAHAGMIGTTRPTHYHVLHDEIGFNADEMQ 235
FF SPDNV PGTVVD+ VCHP+N+DFYMCAHAGMIGTTRPTHYH+LHDEI F AD++Q
Sbjct: 661 FFMPGSPDNVPPGTVVDNAVCHPRNYDFYMCAHAGMIGTTRPTHYHILHDEIHFAADDLQ 482
Query: 236 EFVHSLSYVYQRSTTAISVVAPVCYAHLAAAQVSTFLRLEEMSDASSSQGGGHTSAGSAP 415
+ VHSLSYVYQRSTTAISVV+P+CYAHLAAAQV+ F++ +EMS+ SSSQGGGHTS S P
Sbjct: 481 DLVHSLSYVYQRSTTAISVVSPICYAHLAAAQVAQFIKFDEMSETSSSQGGGHTSTASGP 302
Query: 416 VPELPRLHDKVRSSMFFC*LMCVRIR 493
V ELPRLH+KVRSSMFFC* + R
Sbjct: 301 VQELPRLHEKVRSSMFFC*ALVALAR 224
Score = 207 bits (447), Expect = 5e-053
Identities = 101/138 (73%), Positives = 104/138 (75%)
Frame = -1 / +3
Query: 468 QKNMELLTLSCRRGSSGTGALPAEVCPPPWLEDASDISSNLRNVLTWAAARWA*HTGATT 289
QKNM L T S RRGSS TG L EV PPPWL+D SDISSN N T AAAR A* G TT
Sbjct: 249 QKNMLLRTFSWRRGSSCTGPLAVEVWPPPWLDDVSDISSNFMNCAT*AAARCA*QIGETT 428
Query: 288 EMAVVLLWYT*ESE*TNSCISSALKPISSCRT**WVGLVVPIIPACAHM*KSKFLGWQTL 109
++AVVLLWYT*ESE T SC SSA K ISSCR * VGLVVPIIPA AHM*KS FLGWQT
Sbjct: 429 DIAVVLLWYT*ESECTRSCRSSAAKCISSCRIW*CVGLVVPIIPA*AHM*KS*FLGWQTA 608
Query: 108 LSTTVPGRTLSGDAV*KN 55
LSTTVPG TLSGD KN
Sbjct: 609 LSTTVPGGTLSGDPGMKN 662
Score = 148 bits (317), Expect = 4e-035
Identities = 61/131 (46%), Positives = 93/131 (70%)
Frame = -3 / +2
Query: 469 AEEHGAPDFVMQARQLRHRSTASRGMPSSLAGGRV*HLLQSQERAHLGCSEVGVAHWSNH 290
AEEH A DF+M+ RQL HR+ SRG+ ++LA R+ HL++ E HL ++ +A W N+
Sbjct: 248 AEEHAAADFLMETRQLLHRAAGSRGVATTLARRRLGHLIKLYELRHLSSCKMCIADWRNN 427
Query: 289 *DGCRAPLVHVRERMNKLLHLVGIETYLVVQNMIVGGPCCSNHPSMCTHVEVEVLRMANF 110
* C APLVH+RERM+K+L ++ + YL++Q+M++ PCC NH SM HV+V + MA+
Sbjct: 428 *YCCCAPLVHIRERMHKILQVIRGKVYLIMQDMVMCWPCCPNHSSMSAHVKVIIPWMADS 607
Query: 109 TIHHSSRKNIV 77
I++S+R++IV
Sbjct: 608 IINNSARRDIV 640
Score = 67.5 bits (141), Expect(2) = 2e-022
Identities = 38/84 (45%), Positives = 53/84 (63%)
Frame = +1 / -1
Query: 232 AGVCSFALLRVPEEHDSHLSGCSSVLRPPRCSPGEHVPEIGGDVRRVLQPGRRAYLGWQC 411
AG C+FALL VP+EH+S++S S++L G V ++ DVR V++PG +L Q
Sbjct: 485 AGSCAFALLCVPKEHNSNISCFSNLLCTSCSCSGGAVHKV**DVRDVVEPGWWPHLYCQR 306
Query: 412 SCAGAASPA*QSQELHVLLLADVR 483
AGAAS *+S + HVLLL+ R
Sbjct: 305 PGAGAASSP*ESPQQHVLLLSASR 234
Score = 57.9 bits (120), Expect(2) = 2e-022
Identities = 24/40 (60%), Positives = 30/40 (75%)
Frame = +1 / -1
Query: 70 ITRQCSSWNCGG**SLPS*ELRLLHVCTCWDDWNNKAHPL 189
I+ QC SW+C * LPS EL LLHV +CW+DW+NKA+ L
Sbjct: 647 IS*QCPSWHCC**CCLPSKEL*LLHVRSCWNDWDNKANTL 528
>gb|AV918127.1|AV918127 AV918127 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags17p11 3', mRNA sequence
Length = 702
Score = 279 bits (603), Expect = 1e-074
Identities = 109/145 (75%), Positives = 125/145 (86%)
Frame = +2 / -3
Query: 59 FQTASPDNVLPGTVVDSKVCHPKNFDFYMCAHAGMIGTTRPTHYHVLHDEIGFNADEMQE 238
F SPDNV PGTVVD+ VCHP+N+DFYMCAHAGMIGTTRPTHYH+LHDEI F AD++Q+
Sbjct: 700 FMPGSPDNVPPGTVVDNAVCHPRNYDFYMCAHAGMIGTTRPTHYHILHDEIHFAADDLQD 521
Query: 239 FVHSLSYVYQRSTTAISVVAPVCYAHLAAAQVSTFLRLEEMSDASSSQGGGHTSAGSAPV 418
VHSLSYVYQRSTTAISVV+P+CYAHLAAAQV+ F++ +EMS+ SSSQGGGHTS S PV
Sbjct: 520 LVHSLSYVYQRSTTAISVVSPICYAHLAAAQVAQFIKFDEMSETSSSQGGGHTSTASGPV 341
Query: 419 PELPRLHDKVRSSMFFC*LMCVRIR 493
ELPRLH+KVRSSMFFC* + R
Sbjct: 340 QELPRLHEKVRSSMFFC*ALVALAR 266
Score = 206 bits (444), Expect = 1e-052
Identities = 99/133 (74%), Positives = 102/133 (76%)
Frame = -1 / +3
Query: 468 QKNMELLTLSCRRGSSGTGALPAEVCPPPWLEDASDISSNLRNVLTWAAARWA*HTGATT 289
QKNM L T S RRGSS TG L EV PPPWL+D SDISSN N T AAAR A* G TT
Sbjct: 291 QKNMLLRTFSWRRGSSCTGPLAVEVWPPPWLDDVSDISSNFMNCAT*AAARCA*QIGETT 470
Query: 288 EMAVVLLWYT*ESE*TNSCISSALKPISSCRT**WVGLVVPIIPACAHM*KSKFLGWQTL 109
++AVVLLWYT*ESE T SC SSA K ISSCR * VGLVVPIIPA AHM*KS FLGWQT
Sbjct: 471 DIAVVLLWYT*ESECTRSCRSSAAKCISSCRIW*CVGLVVPIIPA*AHM*KS*FLGWQTA 650
Query: 108 LSTTVPGRTLSGD 70
LSTTVPG TLSGD
Sbjct: 651 LSTTVPGGTLSGD 689
Score = 148 bits (317), Expect = 4e-035
Identities = 61/131 (46%), Positives = 93/131 (70%)
Frame = -3 / +2
Query: 469 AEEHGAPDFVMQARQLRHRSTASRGMPSSLAGGRV*HLLQSQERAHLGCSEVGVAHWSNH 290
AEEH A DF+M+ RQL HR+ SRG+ ++LA R+ HL++ E HL ++ +A W N+
Sbjct: 290 AEEHAAADFLMETRQLLHRAAGSRGVATTLARRRLGHLIKLYELRHLSSCKMCIADWRNN 469
Query: 289 *DGCRAPLVHVRERMNKLLHLVGIETYLVVQNMIVGGPCCSNHPSMCTHVEVEVLRMANF 110
* C APLVH+RERM+K+L ++ + YL++Q+M++ PCC NH SM HV+V + MA+
Sbjct: 470 *YCCCAPLVHIRERMHKILQVIRGKVYLIMQDMVMCWPCCPNHSSMSAHVKVIIPWMADS 649
Query: 109 TIHHSSRKNIV 77
I++S+R++IV
Sbjct: 650 IINNSARRDIV 682
Score = 67.5 bits (141), Expect(2) = 2e-022
Identities = 38/84 (45%), Positives = 53/84 (63%)
Frame = +1 / -2
Query: 232 AGVCSFALLRVPEEHDSHLSGCSSVLRPPRCSPGEHVPEIGGDVRRVLQPGRRAYLGWQC 411
AG C+FALL VP+EH+S++S S++L G V ++ DVR V++PG +L Q
Sbjct: 527 AGSCAFALLCVPKEHNSNISCFSNLLCTSCSCSGGAVHKV**DVRDVVEPGWWPHLYCQR 348
Query: 412 SCAGAASPA*QSQELHVLLLADVR 483
AGAAS *+S + HVLLL+ R
Sbjct: 347 PGAGAASSP*ESPQQHVLLLSASR 276
Score = 57.9 bits (120), Expect(2) = 2e-022
Identities = 24/40 (60%), Positives = 30/40 (75%)
Frame = +1 / -2
Query: 70 ITRQCSSWNCGG**SLPS*ELRLLHVCTCWDDWNNKAHPL 189
I+ QC SW+C * LPS EL LLHV +CW+DW+NKA+ L
Sbjct: 689 IS*QCPSWHCC**CCLPSKEL*LLHVRSCWNDWDNKANTL 570
>gb|CB876294.1|CB876294 HX10N18w HX Hordeum vulgare subsp. vulgare cDNA clone HX10N18
3-PRIME, mRNA sequence
Length = 676
Score = 272 bits (588), Expect = 2e-072
Identities = 106/140 (75%), Positives = 122/140 (87%)
Frame = +2 / -1
Query: 74 PDNVLPGTVVDSKVCHPKNFDFYMCAHAGMIGTTRPTHYHVLHDEIGFNADEMQEFVHSL 253
PDNV PGTVVD+ VCHP+N+DFYMCAHAGMIGTT PTHYH+LHDEI F AD++Q+ VHSL
Sbjct: 676 PDNVPPGTVVDNAVCHPRNYDFYMCAHAGMIGTTXPTHYHILHDEIHFAADDLQDLVHSL 497
Query: 254 SYVYQRSTTAISVVAPVCYAHLAAAQVSTFLRLEEMSDASSSQGGGHTSAGSAPVPELPR 433
SYVYQRSTTAISVV+P+CYAHLAAAQV+ F++ +EMS+ SSSQGGGHTS S PV ELPR
Sbjct: 496 SYVYQRSTTAISVVSPICYAHLAAAQVAQFIKFDEMSETSSSQGGGHTSTASGPVQELPR 317
Query: 434 LHDKVRSSMFFC*LMCVRIR 493
LH+KVRSSMFFC* + R
Sbjct: 316 LHEKVRSSMFFC*ALVALAR 257
Score = 200 bits (432), Expect = 6e-051
Identities = 97/131 (74%), Positives = 100/131 (76%)
Frame = -1 / +3
Query: 468 QKNMELLTLSCRRGSSGTGALPAEVCPPPWLEDASDISSNLRNVLTWAAARWA*HTGATT 289
QKNM L T S RRGSS TG L EV PPPWL+D SDISSN N T AAAR A* G TT
Sbjct: 282 QKNMLLRTFSWRRGSSCTGPLAVEVWPPPWLDDVSDISSNFMNCAT*AAARCA*QIGETT 461
Query: 288 EMAVVLLWYT*ESE*TNSCISSALKPISSCRT**WVGLVVPIIPACAHM*KSKFLGWQTL 109
++AVVLLWYT*ESE T SC SSA K ISSCR * VGLVVPIIPA AHM*KS FLGWQT
Sbjct: 462 DIAVVLLWYT*ESECTRSCRSSAAKCISSCRIW*CVGLVVPIIPA*AHM*KS*FLGWQTA 641
Query: 108 LSTTVPGRTLS 76
LSTTVPG TLS
Sbjct: 642 LSTTVPGGTLS 674
Score = 144 bits (308), Expect = 7e-034
Identities = 60/131 (45%), Positives = 92/131 (70%)
Frame = -3 / +2
Query: 469 AEEHGAPDFVMQARQLRHRSTASRGMPSSLAGGRV*HLLQSQERAHLGCSEVGVAHWSNH 290
AEEH A DF+M+ RQL HR+ SRG+ ++LA R+ HL++ E HL ++ +A W N+
Sbjct: 281 AEEHAAADFLMETRQLLHRAAGSRGVATTLARRRLGHLIKLYELRHLSSCKMCIADWRNN 460
Query: 289 *DGCRAPLVHVRERMNKLLHLVGIETYLVVQNMIVGGPCCSNHPSMCTHVEVEVLRMANF 110
* C APLVH+RERM+K+L ++ + YL++Q+M++ CC NH SM HV+V + MA+
Sbjct: 461 *YCCCAPLVHIRERMHKILQVIRGKVYLIMQDMVMCWXCCPNHSSMSAHVKVIIPWMADS 640
Query: 109 TIHHSSRKNIV 77
I++S+R++IV
Sbjct: 641 IINNSARRDIV 673
Score = 67.5 bits (141), Expect(2) = 1e-021
Identities = 38/84 (45%), Positives = 53/84 (63%)
Frame = +1 / -3
Query: 232 AGVCSFALLRVPEEHDSHLSGCSSVLRPPRCSPGEHVPEIGGDVRRVLQPGRRAYLGWQC 411
AG C+FALL VP+EH+S++S S++L G V ++ DVR V++PG +L Q
Sbjct: 518 AGSCAFALLCVPKEHNSNISCFSNLLCTSCSCSGGAVHKV**DVRDVVEPGWWPHLYCQR 339
Query: 412 SCAGAASPA*QSQELHVLLLADVR 483
AGAAS *+S + HVLLL+ R
Sbjct: 338 PGAGAASSP*ESPQQHVLLLSASR 267
Score = 55.6 bits (115), Expect(2) = 1e-021
Identities = 22/37 (59%), Positives = 27/37 (72%)
Frame = +1 / -3
Query: 79 QCSSWNCGG**SLPS*ELRLLHVCTCWDDWNNKAHPL 189
QC SW+C * LPS EL LLHV +CW+DW+NK + L
Sbjct: 671 QCPSWHCC**CCLPSKEL*LLHVRSCWNDWDNKXNTL 561
>gb|CB874380.1|CB874380 HX05B15w HX Hordeum vulgare subsp. vulgare cDNA clone HX05B15
3-PRIME, mRNA sequence
Length = 626
Score = 271 bits (587), Expect = 2e-072
Identities = 106/139 (76%), Positives = 122/139 (87%)
Frame = +2 / -1
Query: 77 DNVLPGTVVDSKVCHPKNFDFYMCAHAGMIGTTRPTHYHVLHDEIGFNADEMQEFVHSLS 256
DNV PGTVVD+ VCHP+N+DFYMCAHAGMIGTTRPTHYH+LHDEI F AD++Q+ VHSLS
Sbjct: 626 DNVPPGTVVDNAVCHPRNYDFYMCAHAGMIGTTRPTHYHILHDEIHFAADDLQDLVHSLS 447
Query: 257 YVYQRSTTAISVVAPVCYAHLAAAQVSTFLRLEEMSDASSSQGGGHTSAGSAPVPELPRL 436
YVYQRSTTAISVV+P+CYAHLAAAQV+ F++ +EMS+ SSSQGGGHTS S PV ELPRL
Sbjct: 446 YVYQRSTTAISVVSPICYAHLAAAQVAQFIKFDEMSETSSSQGGGHTSTASGPVQELPRL 267
Query: 437 HDKVRSSMFFC*LMCVRIR 493
H+KVRSSMFFC* + R
Sbjct: 266 HEKVRSSMFFC*ALVALAR 210
Score = 199 bits (428), Expect = 2e-050
Identities = 96/130 (73%), Positives = 99/130 (76%)
Frame = -1 / +1
Query: 468 QKNMELLTLSCRRGSSGTGALPAEVCPPPWLEDASDISSNLRNVLTWAAARWA*HTGATT 289
QKNM L T S RRGSS TG L EV PPPWL+D SDISSN N T AAAR A* G TT
Sbjct: 235 QKNMLLRTFSWRRGSSCTGPLAVEVWPPPWLDDVSDISSNFMNCAT*AAARCA*QIGETT 414
Query: 288 EMAVVLLWYT*ESE*TNSCISSALKPISSCRT**WVGLVVPIIPACAHM*KSKFLGWQTL 109
++AVVLLWYT*ESE T SC SSA K ISSCR * VGLVVPIIPA AHM*KS FLGWQT
Sbjct: 415 DIAVVLLWYT*ESECTRSCRSSAAKCISSCRIW*CVGLVVPIIPA*AHM*KS*FLGWQTA 594
Query: 108 LSTTVPGRTL 79
LSTTVPG TL
Sbjct: 595 LSTTVPGGTL 624
Score = 148 bits (317), Expect = 4e-035
Identities = 61/131 (46%), Positives = 93/131 (70%)
Frame = -3 / +3
Query: 469 AEEHGAPDFVMQARQLRHRSTASRGMPSSLAGGRV*HLLQSQERAHLGCSEVGVAHWSNH 290
AEEH A DF+M+ RQL HR+ SRG+ ++LA R+ HL++ E HL ++ +A W N+
Sbjct: 234 AEEHAAADFLMETRQLLHRAAGSRGVATTLARRRLGHLIKLYELRHLSSCKMCIADWRNN 413
Query: 289 *DGCRAPLVHVRERMNKLLHLVGIETYLVVQNMIVGGPCCSNHPSMCTHVEVEVLRMANF 110
* C APLVH+RERM+K+L ++ + YL++Q+M++ PCC NH SM HV+V + MA+
Sbjct: 414 *YCCCAPLVHIRERMHKILQVIRGKVYLIMQDMVMCWPCCPNHSSMSAHVKVIIPWMADS 593
Query: 109 TIHHSSRKNIV 77
I++S+R++IV
Sbjct: 594 IINNSARRDIV 626
Score = 67.5 bits (141), Expect(2) = 3e-022
Identities = 38/84 (45%), Positives = 53/84 (63%)
Frame = +1 / -3
Query: 232 AGVCSFALLRVPEEHDSHLSGCSSVLRPPRCSPGEHVPEIGGDVRRVLQPGRRAYLGWQC 411
AG C+FALL VP+EH+S++S S++L G V ++ DVR V++PG +L Q
Sbjct: 471 AGSCAFALLCVPKEHNSNISCFSNLLCTSCSCSGGAVHKV**DVRDVVEPGWWPHLYCQR 292
Query: 412 SCAGAASPA*QSQELHVLLLADVR 483
AGAAS *+S + HVLLL+ R
Sbjct: 291 PGAGAASSP*ESPQQHVLLLSASR 220
Score = 57.4 bits (119), Expect(2) = 3e-022
Identities = 23/37 (62%), Positives = 28/37 (75%)
Frame = +1 / -3
Query: 79 QCSSWNCGG**SLPS*ELRLLHVCTCWDDWNNKAHPL 189
QC SW+C * LPS EL LLHV +CW+DW+NKA+ L
Sbjct: 624 QCPSWHCC**CCLPSKEL*LLHVRSCWNDWDNKANTL 514
>gb|CB875735.1|CB875735 HX09D06w HX Hordeum vulgare subsp. vulgare cDNA clone HX09D06
3-PRIME, mRNA sequence
Length = 674
Score = 271 bits (587), Expect = 2e-072
Identities = 106/139 (76%), Positives = 122/139 (87%)
Frame = +2 / -1
Query: 77 DNVLPGTVVDSKVCHPKNFDFYMCAHAGMIGTTRPTHYHVLHDEIGFNADEMQEFVHSLS 256
DNV PGTVVD+ VCHP+N+DFYMCAHAGMIGTTRPTHYH+LHDEI F AD++Q+ VHSLS
Sbjct: 674 DNVPPGTVVDNAVCHPRNYDFYMCAHAGMIGTTRPTHYHILHDEIHFAADDLQDLVHSLS 495
Query: 257 YVYQRSTTAISVVAPVCYAHLAAAQVSTFLRLEEMSDASSSQGGGHTSAGSAPVPELPRL 436
YVYQRSTTAISVV+P+CYAHLAAAQV+ F++ +EMS+ SSSQGGGHTS S PV ELPRL
Sbjct: 494 YVYQRSTTAISVVSPICYAHLAAAQVAQFIKFDEMSETSSSQGGGHTSTASGPVQELPRL 315
Query: 437 HDKVRSSMFFC*LMCVRIR 493
H+KVRSSMFFC* + R
Sbjct: 314 HEKVRSSMFFC*ALVALAR 258
Score = 199 bits (428), Expect = 2e-050
Identities = 96/130 (73%), Positives = 99/130 (76%)
Frame = -1 / +1
Query: 468 QKNMELLTLSCRRGSSGTGALPAEVCPPPWLEDASDISSNLRNVLTWAAARWA*HTGATT 289
QKNM L T S RRGSS TG L EV PPPWL+D SDISSN N T AAAR A* G TT
Sbjct: 283 QKNMLLRTFSWRRGSSCTGPLAVEVWPPPWLDDVSDISSNFMNCAT*AAARCA*QIGETT 462
Query: 288 EMAVVLLWYT*ESE*TNSCISSALKPISSCRT**WVGLVVPIIPACAHM*KSKFLGWQTL 109
++AVVLLWYT*ESE T SC SSA K ISSCR * VGLVVPIIPA AHM*KS FLGWQT
Sbjct: 463 DIAVVLLWYT*ESECTRSCRSSAAKCISSCRIW*CVGLVVPIIPA*AHM*KS*FLGWQTA 642
Query: 108 LSTTVPGRTL 79
LSTTVPG TL
Sbjct: 643 LSTTVPGGTL 672
Score = 148 bits (317), Expect = 4e-035
Identities = 61/131 (46%), Positives = 93/131 (70%)
Frame = -3 / +3
Query: 469 AEEHGAPDFVMQARQLRHRSTASRGMPSSLAGGRV*HLLQSQERAHLGCSEVGVAHWSNH 290
AEEH A DF+M+ RQL HR+ SRG+ ++LA R+ HL++ E HL ++ +A W N+
Sbjct: 282 AEEHAAADFLMETRQLLHRAAGSRGVATTLARRRLGHLIKLYELRHLSSCKMCIADWRNN 461
Query: 289 *DGCRAPLVHVRERMNKLLHLVGIETYLVVQNMIVGGPCCSNHPSMCTHVEVEVLRMANF 110
* C APLVH+RERM+K+L ++ + YL++Q+M++ PCC NH SM HV+V + MA+
Sbjct: 462 *YCCCAPLVHIRERMHKILQVIRGKVYLIMQDMVMCWPCCPNHSSMSAHVKVIIPWMADS 641
Query: 109 TIHHSSRKNIV 77
I++S+R++IV
Sbjct: 642 IINNSARRDIV 674
Score = 67.5 bits (141), Expect(2) = 3e-022
Identities = 38/84 (45%), Positives = 53/84 (63%)
Frame = +1 / -3
Query: 232 AGVCSFALLRVPEEHDSHLSGCSSVLRPPRCSPGEHVPEIGGDVRRVLQPGRRAYLGWQC 411
AG C+FALL VP+EH+S++S S++L G V ++ DVR V++PG +L Q
Sbjct: 519 AGSCAFALLCVPKEHNSNISCFSNLLCTSCSCSGGAVHKV**DVRDVVEPGWWPHLYCQR 340
Query: 412 SCAGAASPA*QSQELHVLLLADVR 483
AGAAS *+S + HVLLL+ R
Sbjct: 339 PGAGAASSP*ESPQQHVLLLSASR 268
Score = 57.4 bits (119), Expect(2) = 3e-022
Identities = 23/37 (62%), Positives = 28/37 (75%)
Frame = +1 / -3
Query: 79 QCSSWNCGG**SLPS*ELRLLHVCTCWDDWNNKAHPL 189
QC SW+C * LPS EL LLHV +CW+DW+NKA+ L
Sbjct: 672 QCPSWHCC**CCLPSKEL*LLHVRSCWNDWDNKANTL 562
>gb|CB875995.1|CB875995 HX09P10w HX Hordeum vulgare subsp. vulgare cDNA clone HX09P10
3-PRIME, mRNA sequence
Length = 626
Score = 271 bits (587), Expect = 2e-072
Identities = 106/139 (76%), Positives = 122/139 (87%)
Frame = +2 / -1
Query: 77 DNVLPGTVVDSKVCHPKNFDFYMCAHAGMIGTTRPTHYHVLHDEIGFNADEMQEFVHSLS 256
DNV PGTVVD+ VCHP+N+DFYMCAHAGMIGTTRPTHYH+LHDEI F AD++Q+ VHSLS
Sbjct: 626 DNVPPGTVVDNAVCHPRNYDFYMCAHAGMIGTTRPTHYHILHDEIHFAADDLQDLVHSLS 447
Query: 257 YVYQRSTTAISVVAPVCYAHLAAAQVSTFLRLEEMSDASSSQGGGHTSAGSAPVPELPRL 436
YVYQRSTTAISVV+P+CYAHLAAAQV+ F++ +EMS+ SSSQGGGHTS S PV ELPRL
Sbjct: 446 YVYQRSTTAISVVSPICYAHLAAAQVAQFIKFDEMSETSSSQGGGHTSTASGPVQELPRL 267
Query: 437 HDKVRSSMFFC*LMCVRIR 493
H+KVRSSMFFC* + R
Sbjct: 266 HEKVRSSMFFC*ALVALAR 210
Score = 199 bits (428), Expect = 2e-050
Identities = 96/130 (73%), Positives = 99/130 (76%)
Frame = -1 / +1
Query: 468 QKNMELLTLSCRRGSSGTGALPAEVCPPPWLEDASDISSNLRNVLTWAAARWA*HTGATT 289
QKNM L T S RRGSS TG L EV PPPWL+D SDISSN N T AAAR A* G TT
Sbjct: 235 QKNMLLRTFSWRRGSSCTGPLAVEVWPPPWLDDVSDISSNFMNCAT*AAARCA*QIGETT 414
Query: 288 EMAVVLLWYT*ESE*TNSCISSALKPISSCRT**WVGLVVPIIPACAHM*KSKFLGWQTL 109
++AVVLLWYT*ESE T SC SSA K ISSCR * VGLVVPIIPA AHM*KS FLGWQT
Sbjct: 415 DIAVVLLWYT*ESECTRSCRSSAAKCISSCRIW*CVGLVVPIIPA*AHM*KS*FLGWQTA 594
Query: 108 LSTTVPGRTL 79
LSTTVPG TL
Sbjct: 595 LSTTVPGGTL 624
Score = 148 bits (317), Expect = 4e-035
Identities = 61/131 (46%), Positives = 93/131 (70%)
Frame = -3 / +3
Query: 469 AEEHGAPDFVMQARQLRHRSTASRGMPSSLAGGRV*HLLQSQERAHLGCSEVGVAHWSNH 290
AEEH A DF+M+ RQL HR+ SRG+ ++LA R+ HL++ E HL ++ +A W N+
Sbjct: 234 AEEHAAADFLMETRQLLHRAAGSRGVATTLARRRLGHLIKLYELRHLSSCKMCIADWRNN 413
Query: 289 *DGCRAPLVHVRERMNKLLHLVGIETYLVVQNMIVGGPCCSNHPSMCTHVEVEVLRMANF 110
* C APLVH+RERM+K+L ++ + YL++Q+M++ PCC NH SM HV+V + MA+
Sbjct: 414 *YCCCAPLVHIRERMHKILQVIRGKVYLIMQDMVMCWPCCPNHSSMSAHVKVIIPWMADS 593
Query: 109 TIHHSSRKNIV 77
I++S+R++IV
Sbjct: 594 IINNSARRDIV 626
Score = 67.5 bits (141), Expect(2) = 3e-022
Identities = 38/84 (45%), Positives = 53/84 (63%)
Frame = +1 / -3
Query: 232 AGVCSFALLRVPEEHDSHLSGCSSVLRPPRCSPGEHVPEIGGDVRRVLQPGRRAYLGWQC 411
AG C+FALL VP+EH+S++S S++L G V ++ DVR V++PG +L Q
Sbjct: 471 AGSCAFALLCVPKEHNSNISCFSNLLCTSCSCSGGAVHKV**DVRDVVEPGWWPHLYCQR 292
Query: 412 SCAGAASPA*QSQELHVLLLADVR 483
AGAAS *+S + HVLLL+ R
Sbjct: 291 PGAGAASSP*ESPQQHVLLLSASR 220
Score = 57.4 bits (119), Expect(2) = 3e-022
Identities = 23/37 (62%), Positives = 28/37 (75%)
Frame = +1 / -3
Query: 79 QCSSWNCGG**SLPS*ELRLLHVCTCWDDWNNKAHPL 189
QC SW+C * LPS EL LLHV +CW+DW+NKA+ L
Sbjct: 624 QCPSWHCC**CCLPSKEL*LLHVRSCWNDWDNKANTL 514
>gb|BU974279.1|BU974279 HB27H05r BC Hordeum vulgare subsp. vulgare cDNA clone HB27H05
5-PRIME, mRNA sequence
Length = 461
Score = 269 bits (581), Expect = 2e-071
Identities = 105/125 (84%), Positives = 115/125 (92%)
Frame = +2 / +1
Query: 2 KWSPKFTVIVAQKNXHTKFFQTASPDNVLPGTVVDSKVCHPKNFDFYMCAHAGMIGTTRP 181
KW PKFTVIVAQKN HT+FFQT SP+NV PGTVVD +VCHPKNFDFYMCAHAGMIGT+RP
Sbjct: 85 KWEPKFTVIVAQKNHHTRFFQTNSPENVPPGTVVDKQVCHPKNFDFYMCAHAGMIGTSRP 264
Query: 182 THYHVLHDEIGFNADEMQEFVHSLSYVYQRSTTAISVVAPVCYAHLAAAQVSTFLRLEEM 361
THYHVLHDEIGF+ADE+QEFVHSLSYVYQRSTTAISV AP+ YAHLAAAQV TF++ E+M
Sbjct: 265 THYHVLHDEIGFSADELQEFVHSLSYVYQRSTTAISVAAPIAYAHLAAAQVGTFMKFEDM 444
Query: 362 SDASS 376
SD SS
Sbjct: 445 SDTSS 459
Score = 194 bits (418), Expect = 5e-049
Identities = 93/125 (74%), Positives = 99/125 (79%)
Frame = -1 / -1
Query: 378 LEDASDISSNLRNVLTWAAARWA*HTGATTEMAVVLLWYT*ESE*TNSCISSALKPISSC 199
L++ SD+SSN V T AAAR A GA TE+AVVLLWYT*ESE TNS SSALKPISSC
Sbjct: 461 LDEVSDMSSNFMKVPTCAAARCAYAIGAATEIAVVLLWYT*ESEWTNSWSSSALKPISSC 282
Query: 198 RT**WVGLVVPIIPACAHM*KSKFLGWQTLLSTTVPGRTLSGDAV*KNLVWXFF*ATITV 19
RT * VGL VPIIPACAHM*KSKFLGW T LSTTVPG T SG+ V KNLV FF*AT+TV
Sbjct: 281 RTW*CVGLDVPIIPACAHM*KSKFLGWHTCLSTTVPGGTFSGEFVWKNLV*WFF*ATMTV 102
Query: 18 NLGDH 4
NLG H
Sbjct: 101 NLGSH 87
Score = 146 bits (313), Expect = 1e-034
Identities = 63/121 (52%), Positives = 75/121 (61%)
Frame = +1 / +3
Query: 1 EVVTQVHCDCCSKEPPHQVLSDGITRQCSSWNCGG**SLPS*ELRLLHVCTCWDDWNNKA 180
+V QVH CCS+EP HQ+ D R+CSSW GG* S+PS EL LLHVC CWDDW+ +A
Sbjct: 84 QVGAQVHSHCCSEEPSHQIFPDKFARKCSSWYGGG*TSVPSQEL*LLHVCACWDDWHVEA 263
Query: 181 HPLSCSARRDRFQCRRDAGVCSFALLRVPEEHDSHLSGCSSVLRPPRCSPGEHVPEIGGD 360
+ L CSA D Q R GVC A L VPEEHD S CS+ +R G H+ E+ G
Sbjct: 264 NALPCSA**DWLQRGRAPGVCPLAFLCVPEEHDGDFSSCSNSVRASGGGAGGHLHEV*GH 443
Query: 361 V 363
V
Sbjct: 444 V 446
Score = 144 bits (309), Expect = 5e-034
Identities = 64/120 (53%), Positives = 87/120 (72%)
Frame = -3 / -3
Query: 361 HLLQSQERAHLGCSEVGVAHWSNH*DGCRAPLVHVRERMNKLLHLVGIETYLVVQNMIVG 182
H+L+ E AHL ++ V +WS++*+ RAPLVH+R+R++KLL LV E L++QNM++
Sbjct: 444 HVLKLHEGAHLRRRQMRVRYWSSY*NRRRAPLVHIRKRVDKLLELVRAEANLIMQNMVMR 265
Query: 181 GPCCSNHPSMCTHVEVEVLRMANFTIHHSSRKNIVW*CRLKELGVXVLLSNNHSELG*PL 2
P +NHPSM THVEV+VL MA+ IHH +R+NI W L++ GV VLLSNN ELG PL
Sbjct: 264 WPRRANHPSMRTHVEVKVLGMAHLFIHHRTRRNIFWRICLEKSGVMVLLSNNDCELGLPL 85
Score = 136 bits (292), Expect = 1e-031
Identities = 63/120 (52%), Positives = 73/120 (60%)
Frame = -2 / -2
Query: 362 TSPPISGTCSPGLQRGGRSTLEQPLRWLSCSSGTRKRANEQTPASRRH*NLSRRAEHDSG 183
T P S C P R+ LEQ L+ SCSSGT K+A+ QTP +R *+ S AEH +
Sbjct: 445 TCPQTS*RCPPAPPPDARTLLEQLLKSPSCSSGTHKKASGQTPGARPR*SQSHHAEHGNA 266
Query: 182 WALLFQSSQHVHTCRSRSS*DGKLYYPPQFQEEHCLVMPSERTWCGGSFEQQSQ*TWVTT 3
A QSSQH HTCRS+SS DG L YPP +QEEH L S + WC GS EQQ *TW T
Sbjct: 265 LASTCQSSQHAHTCRSQSSWDGTLVYPPPYQEEHFLANLSGKIWCDGSSEQQ*L*TWAPT 86
Score = 111 bits (237), Expect = 5e-024
Identities = 60/122 (49%), Positives = 67/122 (54%)
Frame = +3 / +2
Query: 3 SGHPXXXXXXXKRTXTPSSFRRHHQTMFFLELWWIVKFAILRTSTSTCVHMLG*LEQQGP 182
SG P +RT TP R+ Q MF L WWI K AI RT TSTCV MLG*L ++G
Sbjct: 86 SGSPSSQSLLLRRTITPDFSRQIRQKMFLLVRWWINKCAIPRTLTSTCVRMLG*LARRGQ 265
Query: 183 PTIMFCTTR*VSMPTRCRSLFIRSLTCTRGARQPSQWLLQCATPTSLQPR*ARS*DWRRC 362
MFC R S T RSL R L CTRGAR+ Q LLQ T + R A S* R C
Sbjct: 266 RITMFCMMRLASARTSSRSLSTRFLMCTRGARRRFQ*LLQ*RTRIWRRRRWAPS*SLRTC 445
Query: 363 QT 368
+T
Sbjct: 446 RT 451
>gb|AV918025.1|AV918025 AV918025 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags17h21 3', mRNA sequence
Length = 653
Score = 265 bits (574), Expect = 1e-070
Identities = 103/135 (76%), Positives = 119/135 (88%)
Frame = +2 / -2
Query: 89 PGTVVDSKVCHPKNFDFYMCAHAGMIGTTRPTHYHVLHDEIGFNADEMQEFVHSLSYVYQ 268
PGTVVD+ VCHP+N+DFYMCAHAGMIGTTRPTHYH+LHDEI F AD++Q+ VHSLSYVYQ
Sbjct: 652 PGTVVDNAVCHPRNYDFYMCAHAGMIGTTRPTHYHILHDEIHFAADDLQDLVHSLSYVYQ 473
Query: 269 RSTTAISVVAPVCYAHLAAAQVSTFLRLEEMSDASSSQGGGHTSAGSAPVPELPRLHDKV 448
RSTTAISVV+P+CYAHLAAAQV+ F++ +EMS+ SSSQGGGHTS S PV ELPRLH+KV
Sbjct: 472 RSTTAISVVSPICYAHLAAAQVAQFIKFDEMSETSSSQGGGHTSTASGPVQELPRLHEKV 293
Query: 449 RSSMFFC*LMCVRIR 493
RSSMFFC* + R
Sbjct: 292 RSSMFFC*ALVALAR 248
Score = 195 bits (421), Expect = 2e-049
Identities = 94/127 (74%), Positives = 97/127 (76%)
Frame = -1 / +3
Query: 468 QKNMELLTLSCRRGSSGTGALPAEVCPPPWLEDASDISSNLRNVLTWAAARWA*HTGATT 289
QKNM L T S RRGSS TG L EV PPPWL+D SDISSN N T AAAR A* G TT
Sbjct: 273 QKNMLLRTFSWRRGSSCTGPLAVEVWPPPWLDDVSDISSNFMNCAT*AAARCA*QIGETT 452
Query: 288 EMAVVLLWYT*ESE*TNSCISSALKPISSCRT**WVGLVVPIIPACAHM*KSKFLGWQTL 109
++AVVLLWYT*ESE T SC SSA K ISSCR * VGLVVPIIPA AHM*KS FLGWQT
Sbjct: 453 DIAVVLLWYT*ESECTRSCRSSAAKCISSCRIW*CVGLVVPIIPA*AHM*KS*FLGWQTA 632
Query: 108 LSTTVPG 88
LSTTVPG
Sbjct: 633 LSTTVPG 653
Score = 143 bits (306), Expect = 1e-033
Identities = 59/127 (46%), Positives = 89/127 (70%)
Frame = -3 / +2
Query: 469 AEEHGAPDFVMQARQLRHRSTASRGMPSSLAGGRV*HLLQSQERAHLGCSEVGVAHWSNH 290
AEEH A DF+M+ RQL HR+ SRG+ ++LA R+ HL++ E HL ++ +A W N+
Sbjct: 272 AEEHAAADFLMETRQLLHRAAGSRGVATTLARRRLGHLIKLYELRHLSSCKMCIADWRNN 451
Query: 289 *DGCRAPLVHVRERMNKLLHLVGIETYLVVQNMIVGGPCCSNHPSMCTHVEVEVLRMANF 110
* C APLVH+RERM+K+L ++ + YL++Q+M++ PCC NH SM HV+V + MA+
Sbjct: 452 *YCCCAPLVHIRERMHKILQVIRGKVYLIMQDMVMCWPCCPNHSSMSAHVKVIIPWMADS 631
Query: 109 TIHHSSR 89
I++S+R
Sbjct: 632 IINNSAR 652
>gb|BQ462861.1|BQ462861 HI02D22r HI Hordeum vulgare subsp. vulgare cDNA clone HI02D22
5-PRIME, mRNA sequence
Length = 615
Score = 225 bits (485), Expect(2) = 5e-066
Identities = 90/125 (72%), Positives = 103/125 (82%)
Frame = +2 / +1
Query: 11 PKFTVIVAQKNXHTKFFQTASPDNVLPGTVVDSKVCHPKNFDFYMCAHAGMIGTTRPTHY 190
PK TVI+AQKN HTK FQ +PDNV GTVVDS + HPK +DFYMCAHAG IGT+RPTHY
Sbjct: 70 PKITVIIAQKNHHTKLFQADAPDNVPAGTVVDSGIVHPKQYDFYMCAHAGPIGTSRPTHY 249
Query: 191 HVLHDEIGFNADEMQEFVHSLSYVYQRSTTAISVVAPVCYAHLAAAQVSTFLRLEEMSDA 370
HVL D+IGF DE+Q+ V SLSYVYQRSTTAISVVAP+CYAHLAAAQ+S F++ EE +D
Sbjct: 250 HVLLDQIGFTPDELQKLVLSLSYVYQRSTTAISVVAPICYAHLAAAQMSQFIKFEEFADT 429
Query: 371 SSSQG 385
SS G
Sbjct: 430 SSGSG 444
Score = 135 bits (290), Expect(2) = 2e-035
Identities = 74/125 (59%), Positives = 83/125 (66%)
Frame = -1 / -2
Query: 384 PWLEDASDISSNLRNVLTWAAARWA*HTGATTEMAVVLLWYT*ESE*TNSCISSALKPIS 205
P ++ S SSN N L AAAR A* GATT++AVVLLWYT*ESE T+ SS +KPI
Sbjct: 443 PLPDEVSANSSNFMNWLICAAARCA*QIGATTDIAVVLLWYT*ESERTSFWSSSGVKPI* 264
Query: 204 SCRT**WVGLVVPIIPACAHM*KSKFLGWQTLLSTTVPGRTLSGDAV*KNLVWXFF*ATI 25
S +T**WVGL VPI PA AHM*KS G STTVP TLSG + + VW FF*A I
Sbjct: 263 SSKT**WVGLEVPIGPA*AHM*KSYCFG*TIPESTTVPAGTLSGASAWNSFVW*FF*AII 84
Query: 24 TVNLG 10
TV G
Sbjct: 83 TVIFG 69
Score = 100 bits (214), Expect = 7e-021
Identities = 48/115 (41%), Positives = 67/115 (58%)
Frame = -3 / -1
Query: 358 LLQSQERAHLGCSEVGVAHWSNH*DGCRAPLVHVRERMNKLLHLVGIETYLVVQNMIVGG 179
LL+ E AHL C +V V +H APLVH+ +R N L + ET L+ Q+MI+GG
Sbjct: 417 LLEFYELAHLRCCKVRVTDRCHHRYCSGAPLVHIGKRKN*FLEFIWCETNLIKQDMIMGG 238
Query: 178 PCCSNHPSMCTHVEVEVLRMANFTIHHSSRKNIVW*CRLKELGVXVLLSNNHSEL 14
P + M THVE+ + RM N +H+S NI+W L++ V +LLSNN+ L
Sbjct: 237 P*GAYRSRMSTHVEIILFRMNNTRVHYSPSWNIIWCISLEQFRVVILLSNNNCNL 73
Score = 46.4 bits (95), Expect(2) = 5e-066
Identities = 21/34 (61%), Positives = 25/34 (73%)
Frame = +2 / +1
Query: 371 SSSQGGGHTSAGSAPVPELPRLHDKVRSSMFFC* 472
+SS G +S+ +A VPELPRLH V SSMFFC*
Sbjct: 427 TSSGSGVPSSSTAATVPELPRLHSDVCSSMFFC* 528
Score = 33.1 bits (66), Expect(2) = 2e-035
Identities = 14/20 (70%), Positives = 15/20 (75%)
Frame = -1 / -2
Query: 468 QKNMELLTLSCRRGSSGTGA 409
QKN+EL T C RGSSGT A
Sbjct: 524 QKNIELQTSECSRGSSGTVA 465
>gb|BQ472674.1|BQ472674 HB01M23r BC Hordeum vulgare subsp. vulgare cDNA clone HB01M23
5-PRIME, mRNA sequence
Length = 581
Score = 238 bits (514), Expect = 3e-062
Identities = 93/123 (75%), Positives = 108/123 (87%)
Frame = +2 / -1
Query: 125 KNFDFYMCAHAGMIGTTRPTHYHVLHDEIGFNADEMQEFVHSLSYVYQRSTTAISVVAPV 304
+N+DFYMCAHAGMIGTTRPTHYH+LHDEI F AD++Q+ VHSLSYVYQRSTTAISVV+P+
Sbjct: 581 RNYDFYMCAHAGMIGTTRPTHYHILHDEIHFAADDLQDLVHSLSYVYQRSTTAISVVSPI 402
Query: 305 CYAHLAAAQVSTFLRLEEMSDASSSQGGGHTSAGSAPVPELPRLHDKVRSSMFFC*LMCV 484
CYAHLAAAQV+ F++ +EMS+ SSSQGGGHTS S PV ELPRLH+KVRSSMFFC* +
Sbjct: 401 CYAHLAAAQVAQFIKFDEMSETSSSQGGGHTSTASGPVQELPRLHEKVRSSMFFC*ALVA 222
Query: 485 RIR 493
R
Sbjct: 221 LAR 213
Score = 166 bits (356), Expect = 2e-040
Identities = 82/114 (71%), Positives = 85/114 (74%)
Frame = -1 / +1
Query: 468 QKNMELLTLSCRRGSSGTGALPAEVCPPPWLEDASDISSNLRNVLTWAAARWA*HTGATT 289
QKNM L T S RRGSS TG L EV PPPWL+D SDISSN N T AAAR A* G TT
Sbjct: 238 QKNMLLRTFSWRRGSSCTGPLAVEVWPPPWLDDVSDISSNFMNCAT*AAARCA*QIGETT 417
Query: 288 EMAVVLLWYT*ESE*TNSCISSALKPISSCRT**WVGLVVPIIPACAHM*KSKF 127
++AVVLLWYT*ESE T SC SSA K ISSCR * VGLVVPIIPA AHM*KS F
Sbjct: 418 DIAVVLLWYT*ESECTRSCRSSAAKCISSCRIW*CVGLVVPIIPA*AHM*KS*F 579
Score = 135 bits (289), Expect = 3e-031
Identities = 54/112 (48%), Positives = 79/112 (70%)
Frame = -3 / +3
Query: 469 AEEHGAPDFVMQARQLRHRSTASRGMPSSLAGGRV*HLLQSQERAHLGCSEVGVAHWSNH 290
AEEH A DF+M+ RQL HR+ SRG+ ++LA R+ HL++ E HL ++ +A W N+
Sbjct: 237 AEEHAAADFLMETRQLLHRAAGSRGVATTLARRRLGHLIKLYELRHLSSCKMCIADWRNN 416
Query: 289 *DGCRAPLVHVRERMNKLLHLVGIETYLVVQNMIVGGPCCSNHPSMCTHVEV 134
* C APLVH+RERM+K+L ++ + YL++Q+M++ PCC NH SM HV+V
Sbjct: 417 *YCCCAPLVHIRERMHKILQVIRGKVYLIMQDMVMCWPCCPNHSSMSAHVKV 572
>gb|AV931339.1|AV931339 AV931339 K. Sato unpublished cDNA library, cv. Haruna Nijo second
leaf stage seedling leaves Hordeum vulgare subsp.
vulgare cDNA clone basd19h01 3', mRNA sequence
Length = 607
Score = 227 bits (491), Expect = 4e-059
Identities = 90/118 (76%), Positives = 103/118 (87%)
Frame = +2 / -1
Query: 140 YMCAHAGMIGTTRPTHYHVLHDEIGFNADEMQEFVHSLSYVYQRSTTAISVVAPVCYAHL 319
YMCAHAGMIGTTRPTHYH+LHDEI F AD++Q+ VHSLSYVYQRSTTAISVV+P+CYAHL
Sbjct: 607 YMCAHAGMIGTTRPTHYHILHDEIHFAADDLQDLVHSLSYVYQRSTTAISVVSPICYAHL 428
Query: 320 AAAQVSTFLRLEEMSDASSSQGGGHTSAGSAPVPELPRLHDKVRSSMFFC*LMCVRIR 493
AAAQV+ F++ +EMS+ SSSQGGGHTS S PV ELPRLH+KVRSSMFFC* + R
Sbjct: 427 AAAQVAQFIKFDEMSETSSSQGGGHTSTASGPVQELPRLHEKVRSSMFFC*ALVALAR 254
Score = 160 bits (344), Expect = 8e-039
Identities = 78/109 (71%), Positives = 81/109 (74%)
Frame = -1 / +3
Query: 468 QKNMELLTLSCRRGSSGTGALPAEVCPPPWLEDASDISSNLRNVLTWAAARWA*HTGATT 289
QKNM L T S RRGSS TG L EV PPPWL+D SDISSN N T AAAR A* G TT
Sbjct: 279 QKNMLLRTFSWRRGSSCTGPLAVEVWPPPWLDDVSDISSNFMNCAT*AAARCA*QIGETT 458
Query: 288 EMAVVLLWYT*ESE*TNSCISSALKPISSCRT**WVGLVVPIIPACAHM 142
++AVVLLWYT*ESE T SC SSA K ISSCR * VGLVVPIIPA AHM
Sbjct: 459 DIAVVLLWYT*ESECTRSCRSSAAKCISSCRIW*CVGLVVPIIPA*AHM 605
Score = 133 bits (284), Expect = 1e-030
Identities = 53/110 (48%), Positives = 77/110 (70%)
Frame = -3 / +2
Query: 469 AEEHGAPDFVMQARQLRHRSTASRGMPSSLAGGRV*HLLQSQERAHLGCSEVGVAHWSNH 290
AEEH A DF+M+ RQL HR+ SRG+ ++LA R+ HL++ E HL ++ +A W N+
Sbjct: 278 AEEHAAADFLMETRQLLHRAAGSRGVATTLARRRLGHLIKLYELRHLSSCKMCIADWRNN 457
Query: 289 *DGCRAPLVHVRERMNKLLHLVGIETYLVVQNMIVGGPCCSNHPSMCTHV 140
* C APLVH+RERM+K+L ++ + YL++Q+M++ PCC NH SM HV
Sbjct: 458 *YCCCAPLVHIRERMHKILQVIRGKVYLIMQDMVMCWPCCPNHSSMSAHV 607
>gb|BU969648.1|BU969648 HB12C12r BC Hordeum vulgare subsp. vulgare cDNA clone HB12C12
5-PRIME, mRNA sequence
Length = 471
Score = 221 bits (478), Expect = 3e-057
Identities = 86/97 (88%), Positives = 92/97 (94%)
Frame = +2 / +2
Query: 2 KWSPKFTVIVAQKNXHTKFFQTASPDNVLPGTVVDSKVCHPKNFDFYMCAHAGMIGTTRP 181
KW PKFTVIVAQKN HT+FFQT SP+NV PGTVVD +VCHPKNFDFYMCAHAGMIGT+RP
Sbjct: 179 KWEPKFTVIVAQKNHHTRFFQTNSPENVPPGTVVDKQVCHPKNFDFYMCAHAGMIGTSRP 358
Query: 182 THYHVLHDEIGFNADEMQEFVHSLSYVYQRSTTAISV 292
THYHVLHDEIGF+ADE+QEFVHSLSYVYQRSTTAISV
Sbjct: 359 THYHVLHDEIGFSADELQEFVHSLSYVYQRSTTAISV 469
Score = 167 bits (360), Expect = 5e-041
Identities = 78/96 (81%), Positives = 81/96 (84%)
Frame = -1 / -1
Query: 291 TEMAVVLLWYT*ESE*TNSCISSALKPISSCRT**WVGLVVPIIPACAHM*KSKFLGWQT 112
TE+AVVLLWYT*ESE TNS SSALKPISSCRT * VGL VPIIPACAHM*KSKFLGW T
Sbjct: 468 TEIAVVLLWYT*ESEWTNSWSSSALKPISSCRTW*CVGLDVPIIPACAHM*KSKFLGWHT 289
Query: 111 LLSTTVPGRTLSGDAV*KNLVWXFF*ATITVNLGDH 4
LSTTVPG T SG+ V KNLV FF*AT+TVNLG H
Sbjct: 288 CLSTTVPGGTFSGEFVWKNLV*WFF*ATMTVNLGSH 181
Score = 130 bits (279), Expect = 7e-030
Identities = 55/97 (56%), Positives = 63/97 (64%)
Frame = +1 / +1
Query: 1 EVVTQVHCDCCSKEPPHQVLSDGITRQCSSWNCGG**SLPS*ELRLLHVCTCWDDWNNKA 180
+V QVH CCS+EP HQ+ D R+CSSW GG* S+PS EL LLHVC CWDDW+ +A
Sbjct: 178 QVGAQVHSHCCSEEPSHQIFPDKFARKCSSWYGGG*TSVPSQEL*LLHVCACWDDWHVEA 357
Query: 181 HPLSCSARRDRFQCRRDAGVCSFALLRVPEEHDSHLS 291
+ L CSA D Q R GVC A L VPEEHD S
Sbjct: 358 NALPCSA**DWLQRGRAPGVCPLAFLCVPEEHDGDFS 468
Score = 123 bits (263), Expect = 1e-027
Identities = 54/92 (58%), Positives = 69/92 (75%)
Frame = -3 / -3
Query: 277 RAPLVHVRERMNKLLHLVGIETYLVVQNMIVGGPCCSNHPSMCTHVEVEVLRMANFTIHH 98
RAPLVH+R+R++KLL LV E L++QNM++ P +NHPSM THVEV+VL MA+ IHH
Sbjct: 454 RAPLVHIRKRVDKLLELVRAEANLIMQNMVMRWPRRANHPSMRTHVEVKVLGMAHLFIHH 275
Query: 97 SSRKNIVW*CRLKELGVXVLLSNNHSELG*PL 2
+R+NI W L++ GV VLLSNN ELG PL
Sbjct: 274 RTRRNIFWRICLEKSGVMVLLSNNDCELGLPL 179
Score = 122 bits (260), Expect = 3e-027
Identities = 53/92 (57%), Positives = 61/92 (66%)
Frame = -2 / -2
Query: 278 SCSSGTRKRANEQTPASRRH*NLSRRAEHDSGWALLFQSSQHVHTCRSRSS*DGKLYYPP 99
SCSSGT K+A+ QTP +R *+ S AEH + A QSSQH HTCRS+SS DG L YPP
Sbjct: 455 SCSSGTHKKASGQTPGARPR*SQSHHAEHGNALASTCQSSQHAHTCRSQSSWDGTLVYPP 276
Query: 98 QFQEEHCLVMPSERTWCGGSFEQQSQ*TWVTT 3
+QEEH L S + WC GS EQQ *TW T
Sbjct: 275 PYQEEHFLANLSGKIWCDGSSEQQ*L*TWAPT 180
>gb|AV937068.1|AV937068 AV937068 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal9a21 3', mRNA sequence
Length = 587
Score = 194 bits (418), Expect = 5e-049
Identities = 77/105 (73%), Positives = 90/105 (85%)
Frame = +2 / -1
Query: 179 PTHYHVLHDEIGFNADEMQEFVHSLSYVYQRSTTAISVVAPVCYAHLAAAQVSTFLRLEE 358
PTHYH+LHDEI F AD++Q+ VHSLSYVYQRSTTAISVV+P+CYAHLAAAQV+ F++ +E
Sbjct: 587 PTHYHILHDEIHFAADDLQDLVHSLSYVYQRSTTAISVVSPICYAHLAAAQVAQFIKFDE 408
Query: 359 MSDASSSQGGGHTSAGSAPVPELPRLHDKVRSSMFFC*LMCVRIR 493
MS+ SSSQGGGHTS S PV ELPRLH+KVRSSMFFC* + R
Sbjct: 407 MSETSSSQGGGHTSTASGPVQELPRLHEKVRSSMFFC*ALVALAR 273
Score = 135 bits (289), Expect = 3e-031
Identities = 64/91 (70%), Positives = 67/91 (73%)
Frame = -1 / +1
Query: 468 QKNMELLTLSCRRGSSGTGALPAEVCPPPWLEDASDISSNLRNVLTWAAARWA*HTGATT 289
QKNM L T S RRGSS TG L EV PPPWL+D SDISSN N T AAAR A* G TT
Sbjct: 298 QKNMLLRTFSWRRGSSCTGPLAVEVWPPPWLDDVSDISSNFMNCAT*AAARCA*QIGETT 477
Query: 288 EMAVVLLWYT*ESE*TNSCISSALKPISSCR 196
++AVVLLWYT*ESE T SC SSA K ISSCR
Sbjct: 478 DIAVVLLWYT*ESECTRSCRSSAAKCISSCR 570
Score = 109 bits (232), Expect = 2e-023
Identities = 44/95 (46%), Positives = 68/95 (71%)
Frame = -3 / +3
Query: 469 AEEHGAPDFVMQARQLRHRSTASRGMPSSLAGGRV*HLLQSQERAHLGCSEVGVAHWSNH 290
AEEH A DF+M+ RQL HR+ SRG+ ++LA R+ HL++ E HL ++ +A W N+
Sbjct: 297 AEEHAAADFLMETRQLLHRAAGSRGVATTLARRRLGHLIKLYELRHLSSCKMCIADWRNN 476
Query: 289 *DGCRAPLVHVRERMNKLLHLVGIETYLVVQNMIV 185
* C APLVH+RERM+K+L ++ + YL++Q+M++
Sbjct: 477 *YCCCAPLVHIRERMHKILQVIRGKVYLIMQDMVM 581
>gb|BQ664937.1|BQ664937 HX01H11w HX Hordeum vulgare subsp. vulgare cDNA clone HX01H11
3-PRIME, mRNA sequence
Length = 669
Score = 188 bits (406), Expect = 2e-047
Identities = 77/91 (84%), Positives = 84/91 (92%)
Frame = +2 / -2
Query: 200 HDEIGFNADEMQEFVHSLSYVYQRSTTAISVVAPVCYAHLAAAQVSTFLRLEEMSDASSS 379
HDEIGF+ADE+QEFVHSLSYVYQRSTTAISV AP+ YAHLAAAQV TF++ E+MSD SSS
Sbjct: 668 HDEIGFSADELQEFVHSLSYVYQRSTTAISVAAPIAYAHLAAAQVGTFMKFEDMSDTSSS 489
Query: 380 QGGGHTSAGSAPVPELPRLHDKVRSSMFFC* 472
QGGGHTS GSA VPELPRLH+KVRSSMFFC*
Sbjct: 488 QGGGHTSVGSASVPELPRLHEKVRSSMFFC* 396
Score = 146 bits (313), Expect = 1e-034
Identities = 66/90 (73%), Positives = 71/90 (78%)
Frame = -1 / +1
Query: 468 QKNMELLTLSCRRGSSGTGALPAEVCPPPWLEDASDISSNLRNVLTWAAARWA*HTGATT 289
QKNMELLT SC RGSSGT ALP +V PPPWL++ SD+SSN V T AAAR A GA T
Sbjct: 400 QKNMELLTFSCSRGSSGTEALPTDVWPPPWLDEVSDMSSNFMKVPTCAAARCAYAIGAAT 579
Query: 288 EMAVVLLWYT*ESE*TNSCISSALKPISSC 199
E+AVVLLWYT*ESE TNS SSALKPISSC
Sbjct: 580 EIAVVLLWYT*ESEWTNSWSSSALKPISSC 669
Score = 104 bits (221), Expect = 7e-022
Identities = 47/90 (52%), Positives = 63/90 (70%)
Frame = -3 / +3
Query: 469 AEEHGAPDFVMQARQLRHRSTASRGMPSSLAGGRV*HLLQSQERAHLGCSEVGVAHWSNH 290
AEEHGAP F+MQ RQLRHR A R + SLA V H+L+ E AHL ++ V +WS++
Sbjct: 399 AEEHGAPHFLMQPRQLRHRGAAHRRVAPSLARRSVRHVLKLHEGAHLRRRQMRVRYWSSY 578
Query: 289 *DGCRAPLVHVRERMNKLLHLVGIETYLVV 200
*+ RAPLVH+R+R++KLL LV E L++
Sbjct: 579 *NRRRAPLVHIRKRVDKLLELVRAEANLIM 668
>gb|CB876232.1|CB876232 HX10K21w HX Hordeum vulgare subsp. vulgare cDNA clone HX10K21
3-PRIME, mRNA sequence
Length = 584
Score = 188 bits (406), Expect = 2e-047
Identities = 75/103 (72%), Positives = 88/103 (85%)
Frame = +2 / -3
Query: 185 HYHVLHDEIGFNADEMQEFVHSLSYVYQRSTTAISVVAPVCYAHLAAAQVSTFLRLEEMS 364
HYH+LHDEI F AD++Q+ VHSLSYVYQRSTTAISVV+P+CYAHLAAAQV+ F++ +EMS
Sbjct: 582 HYHILHDEIHFAADDLQDLVHSLSYVYQRSTTAISVVSPICYAHLAAAQVAQFIKFDEMS 403
Query: 365 DASSSQGGGHTSAGSAPVPELPRLHDKVRSSMFFC*LMCVRIR 493
+ SSSQGGGHTS S PV ELPRLH+KVRSSMFFC* + R
Sbjct: 402 ETSSSQGGGHTSTASGPVQELPRLHEKVRSSMFFC*ALVALAR 274
Score = 135 bits (289), Expect = 3e-031
Identities = 64/91 (70%), Positives = 67/91 (73%)
Frame = -1 / +2
Query: 468 QKNMELLTLSCRRGSSGTGALPAEVCPPPWLEDASDISSNLRNVLTWAAARWA*HTGATT 289
QKNM L T S RRGSS TG L EV PPPWL+D SDISSN N T AAAR A* G TT
Sbjct: 299 QKNMLLRTFSWRRGSSCTGPLAVEVWPPPWLDDVSDISSNFMNCAT*AAARCA*QIGETT 478
Query: 288 EMAVVLLWYT*ESE*TNSCISSALKPISSCR 196
++AVVLLWYT*ESE T SC SSA K ISSCR
Sbjct: 479 DIAVVLLWYT*ESECTRSCRSSAAKCISSCR 571
Score = 109 bits (232), Expect = 2e-023
Identities = 44/95 (46%), Positives = 68/95 (71%)
Frame = -3 / +1
Query: 469 AEEHGAPDFVMQARQLRHRSTASRGMPSSLAGGRV*HLLQSQERAHLGCSEVGVAHWSNH 290
AEEH A DF+M+ RQL HR+ SRG+ ++LA R+ HL++ E HL ++ +A W N+
Sbjct: 298 AEEHAAADFLMETRQLLHRAAGSRGVATTLARRRLGHLIKLYELRHLSSCKMCIADWRNN 477
Query: 289 *DGCRAPLVHVRERMNKLLHLVGIETYLVVQNMIV 185
* C APLVH+RERM+K+L ++ + YL++Q+M++
Sbjct: 478 *YCCCAPLVHIRERMHKILQVIRGKVYLIMQDMVM 582
>gb|BU976900.1|BU976900 HA10I02u HA Hordeum vulgare subsp. vulgare cDNA clone HA10I02
3-PRIME, mRNA sequence
Length = 514
Score = 178 bits (383), Expect = 3e-044
Identities = 72/100 (72%), Positives = 85/100 (85%)
Frame = +2 / -3
Query: 194 VLHDEIGFNADEMQEFVHSLSYVYQRSTTAISVVAPVCYAHLAAAQVSTFLRLEEMSDAS 373
+LHDEI F AD++Q+ VHSLSYVYQRSTTAISVV+P+CYAHLAAAQV+ F++ +EMS+ S
Sbjct: 512 ILHDEIHFAADDLQDLVHSLSYVYQRSTTAISVVSPICYAHLAAAQVAQFIKFDEMSETS 333
Query: 374 SSQGGGHTSAGSAPVPELPRLHDKVRSSMFFC*LMCVRIR 493
SSQGGGHTS S PV ELPRLH+KVRSSMFFC* + R
Sbjct: 332 SSQGGGHTSTASGPVQELPRLHEKVRSSMFFC*ALVALAR 213
Score = 135 bits (289), Expect = 3e-031
Identities = 64/91 (70%), Positives = 67/91 (73%)
Frame = -1 / +1
Query: 468 QKNMELLTLSCRRGSSGTGALPAEVCPPPWLEDASDISSNLRNVLTWAAARWA*HTGATT 289
QKNM L T S RRGSS TG L EV PPPWL+D SDISSN N T AAAR A* G TT
Sbjct: 238 QKNMLLRTFSWRRGSSCTGPLAVEVWPPPWLDDVSDISSNFMNCAT*AAARCA*QIGETT 417
Query: 288 EMAVVLLWYT*ESE*TNSCISSALKPISSCR 196
++AVVLLWYT*ESE T SC SSA K ISSCR
Sbjct: 418 DIAVVLLWYT*ESECTRSCRSSAAKCISSCR 510
Score = 105 bits (223), Expect = 4e-022
Identities = 43/92 (46%), Positives = 65/92 (70%)
Frame = -3 / +3
Query: 469 AEEHGAPDFVMQARQLRHRSTASRGMPSSLAGGRV*HLLQSQERAHLGCSEVGVAHWSNH 290
AEEH A DF+M+ RQL HR+ SRG+ ++LA R+ HL++ E HL ++ +A W N+
Sbjct: 237 AEEHAAADFLMETRQLLHRAAGSRGVATTLARRRLGHLIKLYELRHLSSCKMCIADWRNN 416
Query: 289 *DGCRAPLVHVRERMNKLLHLVGIETYLVVQN 194
* C APLVH+RERM+K+L ++ + YL++Q+
Sbjct: 417 *YCCCAPLVHIRERMHKILQVIRGKVYLIMQD 512
>gb|BQ659639.1|BQ659639 HF01C16w HF Hordeum vulgare subsp. vulgare cDNA clone HF01C16
3-PRIME, mRNA sequence
Length = 623
Score = 175 bits (377), Expect = 2e-043
Identities = 72/86 (83%), Positives = 79/86 (91%)
Frame = +2 / -2
Query: 215 FNADEMQEFVHSLSYVYQRSTTAISVVAPVCYAHLAAAQVSTFLRLEEMSDASSSQGGGH 394
F+ADE+QEFVHSLSYVYQRSTTAISV AP+ YAHLAAAQV TF++ E+MSD SSSQGGGH
Sbjct: 622 FSADELQEFVHSLSYVYQRSTTAISVAAPIAYAHLAAAQVGTFMKFEDMSDTSSSQGGGH 443
Query: 395 TSAGSAPVPELPRLHDKVRSSMFFC* 472
TS GSA VPELPRLH+KVRSSMFFC*
Sbjct: 442 TSVGSASVPELPRLHEKVRSSMFFC* 365
Score = 133 bits (285), Expect = 1e-030
Identities = 61/85 (71%), Positives = 66/85 (77%)
Frame = -1 / +3
Query: 468 QKNMELLTLSCRRGSSGTGALPAEVCPPPWLEDASDISSNLRNVLTWAAARWA*HTGATT 289
QKNMELLT SC RGSSGT ALP +V PPPWL++ SD+SSN V T AAAR A GA T
Sbjct: 369 QKNMELLTFSCSRGSSGTEALPTDVWPPPWLDEVSDMSSNFMKVPTCAAARCAYAIGAAT 548
Query: 288 EMAVVLLWYT*ESE*TNSCISSALK 214
E+AVVLLWYT*ESE TNS SSALK
Sbjct: 549 EIAVVLLWYT*ESEWTNSWSSSALK 623
Score = 101 bits (215), Expect = 5e-021
Identities = 46/85 (54%), Positives = 60/85 (70%)
Frame = -3 / +2
Query: 469 AEEHGAPDFVMQARQLRHRSTASRGMPSSLAGGRV*HLLQSQERAHLGCSEVGVAHWSNH 290
AEEHGAP F+MQ RQLRHR A R + SLA V H+L+ E AHL ++ V +WS++
Sbjct: 368 AEEHGAPHFLMQPRQLRHRGAAHRRVAPSLARRSVRHVLKLHEGAHLRRRQMRVRYWSSY 547
Query: 289 *DGCRAPLVHVRERMNKLLHLVGIE 215
*+ RAPLVH+R+R++KLL LV E
Sbjct: 548 *NRRRAPLVHIRKRVDKLLELVRAE 622
>gb|CA022160.1|CA022160 HZ42F08r HZ Hordeum vulgare subsp. vulgare cDNA clone HZ42F08
5-PRIME, mRNA sequence
Length = 520
Score = 157 bits (337), Expect = 7e-038
Identities = 57/69 (82%), Positives = 63/69 (91%)
Frame = +2 / +1
Query: 5 WSPKFTVIVAQKNXHTKFFQTASPDNVLPGTVVDSKVCHPKNFDFYMCAHAGMIGTTRPT 184
W+PKFT+IVAQKN HTKFF SPDNV PGTVVD+ VCHP+N+DFYMCAHAGMIGTTRPT
Sbjct: 313 WNPKFTLIVAQKNHHTKFFMPGSPDNVPPGTVVDNAVCHPRNYDFYMCAHAGMIGTTRPT 492
Query: 185 HYHVLHDEI 211
HYH+LHDEI
Sbjct: 493 HYHILHDEI 519
Score = 115 bits (245), Expect = 4e-025
Identities = 55/70 (78%), Positives = 56/70 (80%)
Frame = -1 / -3
Query: 210 ISSCRT**WVGLVVPIIPACAHM*KSKFLGWQTLLSTTVPGRTLSGDAV*KNLVWXFF*A 31
ISSCR * VGLVVPIIPA AHM*KS FLGWQT LSTTVPG TLSGD KN VW FF*A
Sbjct: 518 ISSCRIW*CVGLVVPIIPA*AHM*KS*FLGWQTALSTTVPGGTLSGDPGMKNFVW*FF*A 339
Query: 30 TITVNLGDHF 1
TI+VNLG F
Sbjct: 338 TISVNLGFQF 309
>gb|CB874756.1|CB874756 HX06D16w HX Hordeum vulgare subsp. vulgare cDNA clone HX06D16
3-PRIME, mRNA sequence
Length = 635
Score = 138 bits (297), Expect(2) = 2e-034
Identities = 52/101 (51%), Positives = 69/101 (68%)
Frame = +2 / -3
Query: 83 VLPGTVVDSKVCHPKNFDFYMCAHAGMIGTTRPTHYHVLHDEIGFNADEMQEFVHSLSYV 262
+LPGTVVDSK+CHP FDFY+C+HAG+ GT+RP HYHVL DE F ADE+Q ++L Y
Sbjct: 600 ILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENKFTADELQTLTNNLCYT 421
Query: 263 YQRSTTAISVVAPVCYAHLAAAQVSTFLRLEEMSDASSSQG 385
Y R T ++S+V P YAHLAA + ++ + S + G
Sbjct: 420 YARCTRSVSIVPPAYYAHLAAFRARFYMEPDTSDSGSMASG 298
Score = 26.7 bits (52), Expect(2) = 2e-034
Identities = 9/23 (39%), Positives = 12/23 (52%)
Frame = +1 / -2
Query: 403 WQCSCAGAASPA*QSQELHVLLL 471
W+C C P + + HVLLL
Sbjct: 256 WECCCQAPPRPEGKREACHVLLL 188
>gb|AV916245.1|AV916245 AV916245 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags12e13 5', mRNA sequence
Length = 481
Score = 142 bits (305), Expect = 2e-033
Identities = 54/92 (58%), Positives = 68/92 (73%)
Frame = +2 / +1
Query: 80 NVLPGTVVDSKVCHPKNFDFYMCAHAGMIGTTRPTHYHVLHDEIGFNADEMQEFVHSLSY 259
N+LPGTVVDSK+CHP FDFY+C+HAG+ GT+RP HYHVL DE F+ADEMQ ++L Y
Sbjct: 202 NILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENNFSADEMQTLTNNLCY 381
Query: 260 VYQRSTTAISVVAPVCYAHLAAAQVSTFLRLE 355
Y R T ++SVV P YAHLAA + ++ E
Sbjct: 382 TYARCTRSVSVVPPAYYAHLAAFRARFYMEPE 477
>gb|BJ451080.1|BJ451080 BJ451080 K. Sato unpublished cDNA library, cv. Akashinriki
vegetative stage leaves Hordeum vulgare subsp. vulgare
cDNA clone baak32j21 5', mRNA sequence
Length = 576
Score = 141 bits (303), Expect = 4e-033
Identities = 53/102 (51%), Positives = 70/102 (68%)
Frame = +2 / +1
Query: 80 NVLPGTVVDSKVCHPKNFDFYMCAHAGMIGTTRPTHYHVLHDEIGFNADEMQEFVHSLSY 259
N+LPGTVVDSK+CHP FDFY+C+HAG+ GT+RP HYHVL DE F AD +Q ++L Y
Sbjct: 196 NILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENNFTADGLQTLTNNLCY 375
Query: 260 VYQRSTTAISVVAPVCYAHLAAAQVSTFLRLEEMSDASSSQG 385
Y R T ++S+V P YAHLAA + ++ L+ S + G
Sbjct: 376 TYARCTRSVSIVPPAYYAHLAAFRARFYMELDTSDGGSVASG 501
>gb|BG415995.2|BG415995 HVSMEk0009F13f Hordeum vulgare testa/pericarp EST library
HVcDNA0013 (normal) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEk0009F13f, mRNA sequence
Length = 970
Score = 141 bits (302), Expect = 5e-033
Identities = 53/102 (51%), Positives = 70/102 (68%)
Frame = +2 / +1
Query: 80 NVLPGTVVDSKVCHPKNFDFYMCAHAGMIGTTRPTHYHVLHDEIGFNADEMQEFVHSLSY 259
N+LPGTVVDSK+CHP FDFY+C+HAG+ GT+RP HYHVL DE F ADE+Q ++L Y
Sbjct: 88 NILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENKFTADELQTLTNNLCY 267
Query: 260 VYQRSTTAISVVAPVCYAHLAAAQVSTFLRLEEMSDASSSQG 385
Y R T ++S+V P YAHLAA + ++ + S + G
Sbjct: 268 TYARCTRSVSIVPPAYYAHLAAFRARFYMEPDTSDSGSVASG 393
>gb|BJ473415.1|BJ473415 BJ473415 K. Sato unpublished cDNA library, cv. Haruna Nijo adult,
heading stage top three leaves Hordeum vulgare subsp.
vulgare cDNA clone baal12f16 3', mRNA sequence
Length = 588
Score = 141 bits (302), Expect = 5e-033
Identities = 53/102 (51%), Positives = 70/102 (68%)
Frame = +2 / -3
Query: 80 NVLPGTVVDSKVCHPKNFDFYMCAHAGMIGTTRPTHYHVLHDEIGFNADEMQEFVHSLSY 259
N+LPGTVVDSK+CHP FDFY+C+HAG+ GT+RP HYHVL DE F ADE+Q ++L Y
Sbjct: 559 NILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENKFTADELQTLTNNLCY 380
Query: 260 VYQRSTTAISVVAPVCYAHLAAAQVSTFLRLEEMSDASSSQG 385
Y R T ++S+V P YAHLAA + ++ + S + G
Sbjct: 379 TYARCTRSVSIVPPAYYAHLAAFRARFYMEPDTSDSGSVASG 254
>gb|CA030113.1|CA030113 HX06C02r HX Hordeum vulgare subsp. vulgare cDNA clone HX06C02
5-PRIME, mRNA sequence
Length = 624
Score = 141 bits (302), Expect = 5e-033
Identities = 53/102 (51%), Positives = 70/102 (68%)
Frame = +2 / +3
Query: 80 NVLPGTVVDSKVCHPKNFDFYMCAHAGMIGTTRPTHYHVLHDEIGFNADEMQEFVHSLSY 259
N+LPGTVVDSK+CHP FDFY+C+HAG+ GT+RP HYHVL DE F ADE+Q ++L Y
Sbjct: 201 NILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENKFTADELQTLTNNLCY 380
Query: 260 VYQRSTTAISVVAPVCYAHLAAAQVSTFLRLEEMSDASSSQG 385
Y R T ++S+V P YAHLAA + ++ + S + G
Sbjct: 381 TYARCTRSVSIVPPAYYAHLAAFRARFYMEPDTSDSGSVASG 506
>gb|CB874722.1|CB874722 HX06C02w HX Hordeum vulgare subsp. vulgare cDNA clone HX06C02
3-PRIME, mRNA sequence
Length = 645
Score = 141 bits (302), Expect = 5e-033
Identities = 53/102 (51%), Positives = 70/102 (68%)
Frame = +2 / -2
Query: 80 NVLPGTVVDSKVCHPKNFDFYMCAHAGMIGTTRPTHYHVLHDEIGFNADEMQEFVHSLSY 259
N+LPGTVVDSK+CHP FDFY+C+HAG+ GT+RP HYHVL DE F ADE+Q ++L Y
Sbjct: 608 NILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENKFTADELQTLTNNLCY 429
Query: 260 VYQRSTTAISVVAPVCYAHLAAAQVSTFLRLEEMSDASSSQG 385
Y R T ++S+V P YAHLAA + ++ + S + G
Sbjct: 428 TYARCTRSVSIVPPAYYAHLAAFRARFYMEPDTSDSGSVASG 303
>gb|BM100617.2|BM100617 EBma01_SQ005_L23_R maternal, 4 DPA, no treatment, cv Optic, EBma01
Hordeum vulgare subsp. vulgare cDNA clone
EBma01_SQ005_L23 5', mRNA sequence
Length = 670
Score = 140 bits (301), Expect = 7e-033
Identities = 52/88 (59%), Positives = 66/88 (75%)
Frame = +2 / +3
Query: 62 QTASPDNVLPGTVVDSKVCHPKNFDFYMCAHAGMIGTTRPTHYHVLHDEIGFNADEMQEF 241
+T N+LPGTVVD+ +CHP FDFY+C+HAG+ GT+RPTHYHVL DE GF AD +Q+
Sbjct: 402 ETDKSGNILPGTVVDTNICHPTEFDFYLCSHAGIQGTSRPTHYHVLFDENGFTADGLQQL 581
Query: 242 VHSLSYVYQRSTTAISVVAPVCYAHLAA 325
++L Y Y R T ++SVV P YAHLAA
Sbjct: 582 TNNLCYTYARCTRSVSVVPPAYYAHLAA 665
>gb|AV921670.1|AV921670 AV921670 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags12e13 3', mRNA sequence
Length = 589
Score = 89.0 bits (188), Expect(2) = 2e-031
Identities = 37/85 (43%), Positives = 49/85 (57%)
Frame = +2 / -2
Query: 167 GTTRPTHYHVLHDEIGFNADEMQEFVHSLSYVYQRSTTAISVVAPVCYAHLAAAQVSTFL 346
GT+RP HYHVL DE F+ADEMQ ++L Y Y R T ++SVV P YAHLAA + ++
Sbjct: 501 GTSRPAHYHVLWDENNFSADEMQTLTNNLCYTYARCTRSVSVVPPAYYAHLAAFRARFYM 322
Query: 347 RLEEMSDASSSQGGGHTSAGSAPVP 421
E + +S G P+P
Sbjct: 321 EPELSENHTSKSSSGTNGTSVKPLP 247
Score = 66.6 bits (139), Expect(2) = 2e-031
Identities = 22/30 (73%), Positives = 27/30 (90%)
Frame = +2 / -1
Query: 80 NVLPGTVVDSKVCHPKNFDFYMCAHAGMIG 169
N+LPGTVVDSK+CHP FDFY+C+HAG+ G
Sbjct: 589 NILPGTVVDSKICHPTEFDFYLCSHAGIPG 500
>gb|BU986936.1|BU986936 HF13F11r HF Hordeum vulgare subsp. vulgare cDNA clone HF13F11
5-PRIME, mRNA sequence
Length = 664
Score = 130 bits (278), Expect = 1e-029
Identities = 49/57 (85%), Positives = 52/57 (91%)
Frame = +2 / +1
Query: 2 KWSPKFTVIVAQKNXHTKFFQTASPDNVLPGTVVDSKVCHPKNFDFYMCAHAGMIGT 172
KW PKFTVIVAQKN HT+FFQT SP+NV PGTVVD +VCHPKNFDFYMCAHAGMIGT
Sbjct: 493 KWEPKFTVIVAQKNHHTRFFQTNSPENVPPGTVVDKQVCHPKNFDFYMCAHAGMIGT 663
Score = 103 bits (219), Expect = 1e-021
Identities = 45/56 (80%), Positives = 47/56 (83%)
Frame = -1 / -3
Query: 171 VPIIPACAHM*KSKFLGWQTLLSTTVPGRTLSGDAV*KNLVWXFF*ATITVNLGDH 4
VPIIPACAHM*KSKFLGW T LSTTVPG T SG+ V KNLV FF*AT+TVNLG H
Sbjct: 662 VPIIPACAHM*KSKFLGWHTCLSTTVPGGTFSGEFVWKNLV*WFF*ATMTVNLGSH 495
>gb|BG415324.2|BG415324 HVSMEk0006A22f Hordeum vulgare testa/pericarp EST library
HVcDNA0013 (normal) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEk0006A22f, mRNA sequence
Length = 639
Score = 117 bits (250), Expect(2) = 8e-029
Identities = 43/82 (52%), Positives = 62/82 (75%)
Frame = +2 / +2
Query: 80 NVLPGTVVDSKVCHPKNFDFYMCAHAGMIGTTRPTHYHVLHDEIGFNADEMQEFVHSLSY 259
NVLPGTVVD+++ P +DFY+C+H G+IGT+RPTHY+ L DE G+ +D++Q V++L +
Sbjct: 11 NVLPGTVVDTRIVDPVTYDFYLCSHNGLIGTSRPTHYYNLMDEHGYGSDDLQRLVYNLCF 190
Query: 260 VYQRSTTAISVVAPVCYAHLAA 325
V+ R T +S+ PV YA LAA
Sbjct: 191 VFARCTKPVSLATPVYYADLAA 256
Score = 29.5 bits (58), Expect(2) = 8e-029
Identities = 12/32 (37%), Positives = 17/32 (53%)
Frame = +2 / +2
Query: 371 SSSQGGGHTSAGSAPVPELPRLHDKVRSSMFF 466
SSS T+AG+ P LH ++ +MFF
Sbjct: 311 SSSSSASSTAAGACDFNNFPTLHVDLQDNMFF 406
>gb|CA001521.1|CA001521 HS17L21u HS Hordeum vulgare subsp. vulgare cDNA clone HS17L21
3-PRIME, mRNA sequence
Length = 574
Score = 127 bits (271), Expect = 9e-029
Identities = 52/64 (81%), Positives = 57/64 (89%)
Frame = +2 / -3
Query: 281 AISVVAPVCYAHLAAAQVSTFLRLEEMSDASSSQGGGHTSAGSAPVPELPRLHDKVRSSM 460
AISV AP+ YAHLAAAQV TF++ E+MSD SSSQGGGHTS GSA VPELPRLH+KVRSSM
Sbjct: 572 AISVAAPIAYAHLAAAQVGTFMKFEDMSDTSSSQGGGHTSVGSASVPELPRLHEKVRSSM 393
Query: 461 FFC* 472
FFC*
Sbjct: 392 FFC* 381
>gb|BU973725.1|BU973725 HB25M17r BC Hordeum vulgare subsp. vulgare cDNA clone HB25M17
5-PRIME, mRNA sequence
Length = 506
Score = 117 bits (250), Expect(2) = 1e-028
Identities = 47/90 (52%), Positives = 61/90 (67%)
Frame = +2 / +1
Query: 122 PKNFDFYMCAHAGMIGTTRPTHYHVLHDEIGFNADEMQEFVHSLSYVYQRSTTAISVVAP 301
P FDFY+C+HAG+ GT+RPTHYHVL DE GF AD +Q+ ++L Y Y R T ++SVV P
Sbjct: 13 PTEFDFYLCSHAGIQGTSRPTHYHVLFDENGFTADGLQQLTNNLCYTYARCTRSVSVVPP 192
Query: 302 VCYAHLAAAQVSTFLRLEEMSDASSSQGGG 391
YAHLAA + + E SD++S GG
Sbjct: 193 AYYAHLAAFRARYYDEPSEGSDSASIVSGG 282
Score = 29.0 bits (57), Expect(2) = 1e-028
Identities = 12/34 (35%), Positives = 18/34 (52%)
Frame = +2 / +1
Query: 374 SSQGGGHTSAGSAPVPELPRLHDKVRSSMFFC*L 475
S+ G + A LPR+ D V+ MF+C*+
Sbjct: 292 SAATGAGAAGPPAAFRPLPRIRDNVKEVMFYC*I 393
>gb|BU996805.1|BU996805 HM14N04r HM Hordeum vulgare subsp. vulgare cDNA clone HM14N04
5-PRIME, mRNA sequence
Length = 612
Score = 122 bits (260), Expect = 3e-027
Identities = 43/89 (48%), Positives = 61/89 (68%)
Frame = +2 / +2
Query: 80 NVLPGTVVDSKVCHPKNFDFYMCAHAGMIGTTRPTHYHVLHDEIGFNADEMQEFVHSLSY 259
NV+PGTVVD ++CHP FDF++C+HAG+ GT+RP HYHVL D+ F+AD++Q ++L Y
Sbjct: 278 NVMPGTVVDRQICHPTEFDFFLCSHAGIKGTSRPAHYHVLRDDNNFSADDLQSLTNNLCY 457
Query: 260 VYQRSTTAISVVAPVCYAHLAAAQVSTFL 346
Y T ++S P YAH A + +L
Sbjct: 458 TYASCTRSVSTAPPAYYAHKLAFRARFYL 544
>gb|CD663310.1|CD663310 UCRHV18_05ad02_b1 Drought-stressed Dicktoo barley epidermis cDNA
library Hordeum vulgare subsp. vulgare cDNA clone
UCRHV18_05ad02, mRNA sequence
Length = 537
Score = 121 bits (259), Expect = 4e-027
Identities = 50/79 (63%), Positives = 60/79 (75%)
Frame = +2 / -3
Query: 236 EFVHSLSYVYQRSTTAISVVAPVCYAHLAAAQVSTFLRLEEMSDASSSQGGGHTSAGSAP 415
+FVHSL YV+QRS TAISVV P+ YAH A AQV F++ +EMS+ +QGGGHT S P
Sbjct: 526 DFVHSLFYVFQRSPTAISVVFPIWYAHFATAQVGQFIKFDEMSETLLNQGGGHTFFSSGP 347
Query: 416 VPELPRLHDKVRSSMFFC* 472
V E+P H+KVRSSMFFC*
Sbjct: 346 VQEVPCFHEKVRSSMFFC* 290
>gb|BU971142.1|BU971142 HB16L19r BC Hordeum vulgare subsp. vulgare cDNA clone HB16L19
5-PRIME, mRNA sequence
Length = 470
Score = 117 bits (251), Expect = 5e-026
Identities = 42/72 (58%), Positives = 54/72 (75%)
Frame = +2 / +1
Query: 62 QTASPDNVLPGTVVDSKVCHPKNFDFYMCAHAGMIGTTRPTHYHVLHDEIGFNADEMQEF 241
+T N+LPGTVVD+ +CHP FDFY+C+HAG+ GT+RPTHYHVL DE GF AD +Q+
Sbjct: 253 ETDKSGNILPGTVVDTNICHPTEFDFYLCSHAGIQGTSRPTHYHVLFDENGFTADGLQQL 432
Query: 242 VHSLSYVYQRST 277
++L Y Y R T
Sbjct: 433 TNNLCYTYARCT 468
>gb|CB859263.1|CB859263 HI09O13w HI Hordeum vulgare subsp. vulgare cDNA clone HI09O13
3-PRIME, mRNA sequence
Length = 544
Score = 105 bits (223), Expect(2) = 3e-025
Identities = 38/77 (49%), Positives = 57/77 (74%)
Frame = +2 / -2
Query: 95 TVVDSKVCHPKNFDFYMCAHAGMIGTTRPTHYHVLHDEIGFNADEMQEFVHSLSYVYQRS 274
TVVD+++ P +DFY+C+H G+IGT+RPTHY+ L DE G+ +D++Q V++L +V+ R
Sbjct: 543 TVVDTRIVDPVTYDFYLCSHNGLIGTSRPTHYYNLMDEHGYGSDDLQRLVYNLCFVFARC 364
Query: 275 TTAISVVAPVCYAHLAA 325
T +S+ PV YA LAA
Sbjct: 363 TKPVSLATPVYYADLAA 313
Score = 29.9 bits (59), Expect(2) = 3e-025
Identities = 12/32 (37%), Positives = 17/32 (53%)
Frame = +2 / -2
Query: 371 SSSQGGGHTSAGSAPVPELPRLHDKVRSSMFF 466
SSS T+AG+ P LH ++ +MFF
Sbjct: 258 SSSSSASSTAAGACDFSNFPTLHVDLQDNMFF 163
>gb|BJ468650.1|BJ468650 BJ468650 K. Sato unpublished cDNA library, cv. Haruna Nijo
germination shoots Hordeum vulgare subsp. vulgare cDNA
clone bags39l05 3', mRNA sequence
Length = 673
Score = 115 bits (245), Expect = 4e-025
Identities = 43/90 (47%), Positives = 58/90 (64%)
Frame = +2 / -3
Query: 116 CHPKNFDFYMCAHAGMIGTTRPTHYHVLHDEIGFNADEMQEFVHSLSYVYQRSTTAISVV 295
CHP FDFY+C+HAG+ GT+RP HYHVL DE F ADE+Q ++L Y Y R T ++S+V
Sbjct: 671 CHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENKFTADELQTLTNNLCYTYARCTRSVSIV 492
Query: 296 APVCYAHLAAAQVSTFLRLEEMSDASSSQG 385
P YAHLAA + ++ + S + G
Sbjct: 491 PPAYYAHLAAFRARFYMEPDTSDSGSVASG 402
>gb|BE215344.1|BE215344 HV_CEb0006I15f Hordeum vulgare seedling green leaf EST library
HVcDNA0005 (Blumeria challenged) Hordeum vulgare subsp.
vulgare cDNA clone HV_CEb0006I15f, mRNA sequence
Length = 679
Score = 107 bits (229), Expect = 6e-023
Identities = 40/69 (57%), Positives = 50/69 (72%)
Frame = +2 / +2
Query: 80 NVLPGTVVDSKVCHPKNFDFYMCAHAGMIGTTRPTHYHVLHDEIGFNADEMQEFVHSLSY 259
N+LPGTVVDSK+CHP FDFY+C HAG+ GT+RP +YHVL DE F ADE+Q L Y
Sbjct: 377 NILPGTVVDSKICHPTEFDFYLCNHAGIQGTSRPANYHVLWDENKFTADELQTLKKKLCY 556
Query: 260 VYQRSTTAI 286
Y + T ++
Sbjct: 557 NYAKGTRSV 583
>emb|AJ234606.1|HVU234606 Hordeum vulgare genomic DNA fragment; clone MWG0876.uni
Length = 486
Score = 57.9 bits (120), Expect(4) = 2e-022
Identities = 26/75 (34%), Positives = 41/75 (54%)
Frame = +2 / -2
Query: 203 DEIGFNADEMQEFVHSLSYVYQRSTTAISVVAPVCYAHLAAAQVSTFLRLEEMSDASSSQ 382
DE F +DE+Q+ +H+L Y + R T +S+V P YAHLAA + +L + S +
Sbjct: 311 DENKFQSDEVQQLIHNLCYTFVRCTRPVSLVPPAYYAHLAAYRGRLYLERSDSVATSCTT 132
Query: 383 GGGHTSAGSAPVPEL 427
T + P+P+L
Sbjct: 131 LYRSTPLQTTPLPKL 87
Score = 46.4 bits (95), Expect(4) = 2e-022
Identities = 15/28 (53%), Positives = 21/28 (75%)
Frame = +2 / -1
Query: 71 SPDNVLPGTVVDSKVCHPKNFDFYMCAH 154
S N+ PGTVVD+ + H + FDFY+C+H
Sbjct: 441 SDQNIPPGTVVDTVITHXREFDFYLCSH 358
Score = 30.9 bits (61), Expect(4) = 2e-022
Identities = 10/14 (71%), Positives = 12/14 (85%)
Frame = +2 / -3
Query: 158 GMIGTTRPTHYHVL 199
G GT+RPTHYH+L
Sbjct: 355 GTKGTSRPTHYHIL 314
Score = 24.9 bits (48), Expect(4) = 2e-022
Identities = 9/16 (56%), Positives = 12/16 (75%)
Frame = +2 / -2
Query: 425 LPRLHDKVRSSMFFC* 472
LP+L D V+ MF+C*
Sbjct: 98 LPKLTDSVKRLMFYC* 51
>gb|BG417822.1|BG417822 HVSMEk0019K06f Hordeum vulgare testa/pericarp EST library
HVcDNA0013 (normal) Hordeum vulgare subsp. vulgare cDNA
clone HVSMEk0019K06f, mRNA sequence
Length = 816
Score = 102 bits (217), Expect = 3e-021
Identities = 42/61 (68%), Positives = 49/61 (80%)
Frame = +2 / +1
Query: 311 AHLAAAQVSTFLRLEEMSDASSSQGGGHTSAGSAPVPELPRLHDKVRSSMFFC*LMCVRI 490
AHLAAAQV+ F++ +EMS+ SSSQGGGHTS S PV ELPRLH+KVRSSMFFC* +
Sbjct: 1 AHLAAAQVAQFIKFDEMSETSSSQGGGHTSTASGPVQELPRLHEKVRSSMFFC*ALVALA 180
Query: 491 R 493
R
Sbjct: 181 R 183
>gb|BM372523.2|BM372523 EBpi05_SQ003_D09_R pistil, 8 DPA, no treatment, cv Optic, EBpi05
Hordeum vulgare subsp. vulgare cDNA clone
EBpi05_SQ003_D09 5', mRNA sequence
Length = 391
Score = 102 bits (217), Expect = 3e-021
Identities = 42/61 (68%), Positives = 49/61 (80%)
Frame = +2 / +1
Query: 311 AHLAAAQVSTFLRLEEMSDASSSQGGGHTSAGSAPVPELPRLHDKVRSSMFFC*LMCVRI 490
AHLAAAQV+ F++ +EMS+ SSSQGGGHTS S PV ELPRLH+KVRSSMFFC* +
Sbjct: 1 AHLAAAQVAQFIKFDEMSETSSSQGGGHTSTASGPVQELPRLHEKVRSSMFFC*ALVALA 180
Query: 491 R 493
R
Sbjct: 181 R 183
Database: Hordeum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:16 PM
Number of letters in database: 175,134,539
Number of sequences in database: 312,970
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 418,056,464
Number of Sequences: 312970
Number of extensions: 7982323
Number of successful extensions: 78100
Number of sequences better than 1.0e-020: 62
length of database: 58,378,179
effective HSP length: 51
effective length of database: 42,416,709
effective search space used: 8313674964
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)