TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= QBTB.064D08F020918.3.1
(559 letters)
Database: Avena_nucl_with_EST.fasta
8143 sequences; 4,702,463 total letters
Score E
Sequences producing significant alignments: (bits) Value
emb|AJ133638.1|ASA133638 Avena sativa mRNA for myb protein 58 9e-015
gb|AI978275.1|AI978275 CDO54.R Oat Etiolated Leaf cDNA Libr... 43 4e-005
gb|CN818083.1|CN818083 HRO4472_A12_A24ZS5 Lib AA070E1X Aven... 31 0.13
gb|CN818591.1|CN818591 HRO4454_H08_P16ZS5 Lib AA070E1X Aven... 30 0.34
gb|CN819069.1|CN819069 HRO4469_A08_B15ZS5 Lib AA070E1X Aven... 29 0.63
gb|CN821041.1|CN821041 HRO4422_H04_O08ZS5 Lib AA069E1X Aven... 28 0.86
gb|CN815102.1|CN815102 HRO4505_H06_O11ZS5 Lib AA071E1X Aven... 28 1.2
gb|CN816152.1|CN816152 HRO4517_E10_I19ZS5 Lib AA071E1X Aven... 28 1.2
gb|CN817727.1|CN817727 HRO4461_E12_J23ZS5 Lib AA070E1X Aven... 28 1.2
gb|CN818853.1|CN818853 HRO4473_F02_XXXZS5 Lib AA070E1X Aven... 28 1.6
gb|CN818847.1|CN818847 HRO4473_H11_XXXZS5 Lib AA070E1X Aven... 27 1.6
gb|CN820289.1|CN820289 HRO4417_F10_K19ZS5 Lib AA069E1X Aven... 27 1.6
emb|Z83832.1|ASSGT Avena sativa mRNA for UDP-glucose:sterol... 27 1.6
gb|CN820640.1|CN820640 HRO4415_G03_N05ZS5 Lib AA069E1X Aven... 27 2.2
gb|CN820983.1|CN820983 HRO4422_B10_C20ZS5 Lib AA069E1X Aven... 27 2.2
gb|CN814888.1|CN814888 HRO4503_E12_J23ZS5 Lib AA071E1X Aven... 27 2.2
gb|CN816852.1|CN816852 HRO4525_E07_I13ZS5 Lib AA071E1X Aven... 27 2.2
gb|CN820755.1|CN820755 HRO4414_D03_G06ZS5 Lib AA069E1X Aven... 27 2.2
gb|AY277385.1| Avena sativa 1,3-beta glucanase (Oglc13) gen... 27 2.2
gb|CN820542.1|CN820542 HRO4413_E11_I21ZS5 Lib AA069E1X Aven... 26 3.1
gb|CN815850.1|CN815850 HRO4511_B09_D17ZS5 Lib AA071E1X Aven... 26 4.1
gb|CK780297.1|CK780297 umn364 UMN cDNA from oat Avena sativ... 26 4.2
gb|CN815315.1|CN815315 HRO4508_C12_F24ZS5 Lib AA071E1X Aven... 26 4.2
gb|CN816193.1|CN816193 HRO4518_A03_A06ZS5 Lib AA071E1X Aven... 26 4.2
gb|CN816209.1|CN816209 HRO4518_B08_C16ZS5 Lib AA071E1X Aven... 26 4.2
gb|CN816807.1|CN816807 HRO4525_A07_A13ZS5 Lib AA071E1X Aven... 26 4.2
gb|CN817273.1|CN817273 HRO4458_D08_H16ZS5 Lib AA070E1X Aven... 26 4.2
gb|CN818814.1|CN818814 HRO4473_G03_XXXZS5 Lib AA070E1X Aven... 26 4.2
gb|CN819204.1|CN819204 HRO4451_D01_G01ZS5 Lib AA070E1X Aven... 26 4.2
gb|CN819271.1|CN819271 HRO4452_A09_A18ZS5 Lib AA070E1X Aven... 26 4.2
gb|CN820587.1|CN820587 HRO4415_B07_D13ZS5 Lib AA069E1X Aven... 26 4.2
gb|BE439333.1|BE439333 CDO1312_WHE05E12F ITEC CDO Oat cDNA ... 26 5.6
gb|CN815480.1|CN815480 HRO4512_B04_D08ZS5 Lib AA071E1X Aven... 26 5.6
gb|CN818654.1|CN818654 HRO4467_E10_I19ZS5 Lib AA070E1X Aven... 26 5.6
gb|CN818757.1|CN818757 HRO4468_C07_E14ZS5 Lib AA070E1X Aven... 26 5.6
emb|AJ780932.1| Avena damascena partial rga gene for putati... 26 5.6
gb|BE439103.1|BE439103 CDO122_WHE2C0082F ITEC CDO Oat cDNA ... 25 5.8
gb|CK780244.1|CK780244 umn107 UMN cDNA from oat Avena sativ... 25 5.8
gb|CN815586.1|CN815586 HRO4513_C10_E19ZS5 Lib AA071E1X Aven... 25 5.8
gb|CN816299.1|CN816299 HRO4519_B10_D19ZS5 Lib AA071E1X Aven... 25 5.8
gb|CN816580.1|CN816580 HRO4522_D06_G12ZS5 Lib AA071E1X Aven... 25 5.8
gb|CN817879.1|CN817879 HRO4462_D06_H12ZS5 Lib AA070E1X Aven... 25 5.8
gb|CN820763.1|CN820763 HRO4414_E02_I04ZS5 Lib AA069E1X Aven... 25 5.8
gb|CN821583.1|CN821583 HRO4426_H12_O24ZS5 Lib AA069E1X Aven... 25 5.8
gb|CN815034.1|CN815034 HRO4505_B06_C11ZS5 Lib AA071E1X Aven... 25 7.6
gb|CN816873.1|CN816873 HRO4525_G05_M09ZS5 Lib AA071E1X Aven... 25 7.6
gb|CN819006.1|CN819006 HRO4474_C08_F16ZS5 Lib AA070E1X Aven... 25 7.6
gb|CN821452.1|CN821452 HRO4425_E04_I07ZS5 Lib AA069E1X Aven... 25 7.6
gb|BE439347.1|BE439347 CDO1015_WHE05E08R ITEC CDO Oat cDNA ... 25 8.0
gb|CN815881.1|CN815881 HRO4511_E06_J11ZS5 Lib AA071E1X Aven... 25 8.0
gb|CN815996.1|CN815996 HRO4515_G03_N05ZS5 Lib AA071E1X Aven... 25 8.0
gb|CN816334.1|CN816334 HRO4519_E10_J19ZS5 Lib AA071E1X Aven... 25 8.0
gb|CN816430.1|CN816430 HRO4520_F07_L14ZS5 Lib AA071E1X Aven... 25 8.0
gb|CN817101.1|CN817101 HRO4528_C03_F06ZS5 Lib AA071E1X Aven... 25 8.0
gb|CN817386.1|CN817386 HRO4454_E07_J14ZS5 Lib AA070E1X Aven... 25 8.0
gb|CN817755.1|CN817755 HRO4461_C08_F15ZS5 Lib AA070E1X Aven... 25 8.0
gb|CN818072.1|CN818072 HRO4472_B07_C14ZS5 Lib AA070E1X Aven... 25 8.0
gb|CN818701.1|CN818701 HRO4467_H06_O11ZS5 Lib AA070E1X Aven... 25 8.0
gb|CN821358.1|CN821358 HRO4424_D07_H14ZS5 Lib AA069E1X Aven... 25 8.0
>emb|AJ133638.1|ASA133638 Avena sativa mRNA for myb protein
Length = 2287
Score = 58.1 bits (123), Expect(2) = 9e-015
Identities = 22/61 (36%), Positives = 34/61 (55%)
Frame = +1 / +2
Query: 373 RNANSCLSRWKYLLDPAINKEPWSQQEELRLIRAQQVYGNKWCKMVKHFPGRTNDALKEH 552
R SC RW L P + K ++ +EE +I+ GNKW +M + PGRT++ +K +
Sbjct: 491 RCGKSCRLRWANHLRPNLKKGAFTPEEERLIIQLHSKMGNKWARMAANLPGRTDNEIKNY 670
Query: 553 W 555
W
Sbjct: 671 W 673
Score = 35.7 bits (73), Expect(2) = 9e-015
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = +1 / +2
Query: 271 KKHRWSSEEDEALKQMVKRHGTKNWRTI 354
KK W+S ED L VK+HG NW +
Sbjct: 386 KKGPWTSAEDAILVDYVKKHGEGNWNAV 469
Score = 25.0 bits (49), Expect = 8.0
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = -3 / -2
Query: 530 VLPGKCLTILHHLFP 486
V PGK IL HLFP
Sbjct: 648 VRPGKLAAILAHLFP 604
>gb|AI978275.1|AI978275 CDO54.R Oat Etiolated Leaf cDNA Library Avena sativa cDNA clone
CDO54, mRNA sequence
Length = 374
Score = 42.9 bits (89), Expect = 4e-005
Identities = 15/27 (55%), Positives = 21/27 (77%)
Frame = +1 / +1
Query: 274 KHRWSSEEDEALKQMVKRHGTKNWRTI 354
K +W+SEE+EAL++ V +HG WRTI
Sbjct: 61 KQKWTSEEEEALRRGVLKHGAGKWRTI 141
Score = 27.7 bits (55), Expect = 1.2
Identities = 14/24 (58%), Positives = 15/24 (62%)
Frame = -3 / -1
Query: 353 IVRQFFVPCLFTICFSASSSSDDH 282
+VR PCL T SASSSSD H
Sbjct: 140 MVRHLPAPCLSTPRRSASSSSDVH 69
>gb|CN818083.1|CN818083 HRO4472_A12_A24ZS5 Lib AA070E1X Avena sativa cv. Ogle-C green leaf
Avena sativa cDNA clone HRO4472_A12_A24, mRNA sequence
Length = 778
Score = 30.8 bits (62), Expect = 0.13
Identities = 14/48 (29%), Positives = 23/48 (47%)
Frame = -1 / -2
Query: 271 YFWNYCSP*SSGQFSCEEVPLSLLIPRLGTVPQFHVVYYSATCLQQPH 128
Y N C ++ +FSCE++P+ + + P F + T Q PH
Sbjct: 369 YDLNICCIRAT*RFSCEQIPIGSIWIIIKYFPFFRIASEDCTSRQWPH 226
>gb|CN818591.1|CN818591 HRO4454_H08_P16ZS5 Lib AA070E1X Avena sativa cv. Ogle-C green leaf
Avena sativa cDNA clone HRO4454_H08_P16, mRNA sequence
Length = 502
Score = 29.9 bits (60), Expect = 0.34
Identities = 11/39 (28%), Positives = 21/39 (53%)
Frame = +1 / +1
Query: 439 WSQQEELRLIRAQQVYGNKWCKMVKHFPGRTNDALKEHW 555
+++ EE + R ++ GN+W + PGRT ++ W
Sbjct: 202 FTEAEEDLVFRMHRLVGNRWELIAGRIPGRTAKEVEMFW 318
Score = 25.0 bits (49), Expect = 8.0
Identities = 13/27 (48%), Positives = 14/27 (51%)
Frame = -3 / -3
Query: 530 VLPGKCLTILHHLFP*TCCARINLSSS 450
VLPG I HLFP + C SSS
Sbjct: 293 VLPGILPAISSHLFPTSLCILKTRSSS 213
>gb|CN819069.1|CN819069 HRO4469_A08_B15ZS5 Lib AA070E1X Avena sativa cv. Ogle-C green leaf
Avena sativa cDNA clone HRO4469_A08_B15, mRNA sequence
Length = 435
Score = 28.6 bits (57), Expect = 0.63
Identities = 10/19 (52%), Positives = 12/19 (63%)
Frame = -3 / -1
Query: 221 GGPSISSDSTPWHSPTVSC 165
GGP +S PW SP+ SC
Sbjct: 141 GGPRPASPPAPWWSPSSSC 85
>gb|CN821041.1|CN821041 HRO4422_H04_O08ZS5 Lib AA069E1X Avena sativa cv. Ogle-C etiolated
leaf Avena sativa cDNA clone HRO4422_H04_O08, mRNA
sequence
Length = 777
Score = 28.1 bits (56), Expect = 0.86
Identities = 10/32 (31%), Positives = 18/32 (56%)
Frame = +2 / -1
Query: 86 SGGLTVQQNTQASQMRLLKTCCRVIYHMKLWD 181
+GG+ Q + S + +K CCR ++H + D
Sbjct: 489 AGGVCPQCSDGGSHLGCIKACCRGLWHQEAAD 394
>gb|CN815102.1|CN815102 HRO4505_H06_O11ZS5 Lib AA071E1X Avena sativa cv. Ogle-C root Avena
sativa cDNA clone HRO4505_H06_O11, mRNA sequence
Length = 595
Score = 27.7 bits (55), Expect = 1.2
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = -1 / +3
Query: 343 SFSSHVFLPFALVPHLPLMTICVFYFWNYCSP 248
S+S + L F +VP L + +F FW+Y P
Sbjct: 453 SYSLFLVLHFHIVPPLWSSSSTIFVFWHYRVP 548
>gb|CN816152.1|CN816152 HRO4517_E10_I19ZS5 Lib AA071E1X Avena sativa cv. Ogle-C root Avena
sativa cDNA clone HRO4517_E10_I19, mRNA sequence
Length = 858
Score = 27.7 bits (55), Expect = 1.2
Identities = 10/18 (55%), Positives = 13/18 (72%)
Frame = -1 / -3
Query: 337 SSHVFLPFALVPHLPLMT 284
S +F PF+LV HLPL +
Sbjct: 484 SGRIFAPFSLVLHLPLFS 431
>gb|CN817727.1|CN817727 HRO4461_E12_J23ZS5 Lib AA070E1X Avena sativa cv. Ogle-C green leaf
Avena sativa cDNA clone HRO4461_E12_J23, mRNA sequence
Length = 839
Score = 27.7 bits (55), Expect = 1.2
Identities = 12/22 (54%), Positives = 13/22 (59%)
Frame = -3 / -3
Query: 221 GGPSISSDSTPWHSPTVSCGIL 156
G PS S ST W S T+SC L
Sbjct: 432 GRPSGYSTSTSWWSSTISCSSL 367
>gb|CN818853.1|CN818853 HRO4473_F02_XXXZS5 Lib AA070E1X Avena sativa cv. Ogle-C green leaf
Avena sativa cDNA clone HRO4473_F02_XXX, mRNA sequence
Length = 762
Score = 27.7 bits (55), Expect = 1.6
Identities = 13/43 (30%), Positives = 21/43 (48%)
Frame = +1 / -3
Query: 244 FTESSSSKNKKHRWSSEEDEALKQMVKRHGTKNWRTIACAIPG 372
+T SS + K RW+S + E ++ R + +AC PG
Sbjct: 298 YTISS*QTDTKKRWASPDPEGSNTLISRVQSVTRIQLACFNPG 170
>gb|CN818847.1|CN818847 HRO4473_H11_XXXZS5 Lib AA070E1X Avena sativa cv. Ogle-C green leaf
Avena sativa cDNA clone HRO4473_H11_XXX, mRNA sequence
Length = 580
Score = 27.2 bits (54), Expect = 1.6
Identities = 11/18 (61%), Positives = 11/18 (61%)
Frame = -1 / +2
Query: 433 LCLLLGLEGTSILKGMSW 380
LCLLLG GT KG W
Sbjct: 176 LCLLLGYAGTERNKGSRW 229
>gb|CN820289.1|CN820289 HRO4417_F10_K19ZS5 Lib AA069E1X Avena sativa cv. Ogle-C etiolated
leaf Avena sativa cDNA clone HRO4417_F10_K19, mRNA
sequence
Length = 636
Score = 27.2 bits (54), Expect = 1.6
Identities = 13/35 (37%), Positives = 17/35 (48%)
Frame = -2 / -3
Query: 234 NFLVRRSLYLF*FHALAQSHSFMWYITLQHVFSNL 130
NF S Y FH S+M +TLQ +F +L
Sbjct: 151 NFCASSSFYSVSFHPYPSFLSWMMILTLQRLFHDL 47
>emb|Z83832.1|ASSGT Avena sativa mRNA for UDP-glucose:sterol glucosyltransferase
Length = 2317
Score = 27.2 bits (54), Expect = 1.6
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = -2 / -2
Query: 198 FHALAQSHSFMWYITLQH 145
FH L + HS +Y+ LQH
Sbjct: 1830 FHGLGKLHSLFFYLWLQH 1777
>gb|CN820640.1|CN820640 HRO4415_G03_N05ZS5 Lib AA069E1X Avena sativa cv. Ogle-C etiolated
leaf Avena sativa cDNA clone HRO4415_G03_N05, mRNA
sequence
Length = 663
Score = 27.2 bits (54), Expect = 2.2
Identities = 10/31 (32%), Positives = 15/31 (48%)
Frame = +1 / +2
Query: 253 SSSSKNKKHRWSSEEDEALKQMVKRHGTKNW 345
SSS+ K W + E V+ HG++ W
Sbjct: 170 SSSASRKCKDWKARRGEKKSLAVRSHGSQGW 262
>gb|CN820983.1|CN820983 HRO4422_B10_C20ZS5 Lib AA069E1X Avena sativa cv. Ogle-C etiolated
leaf Avena sativa cDNA clone HRO4422_B10_C20, mRNA
sequence
Length = 726
Score = 27.2 bits (54), Expect = 2.2
Identities = 10/26 (38%), Positives = 14/26 (53%)
Frame = +1 / -3
Query: 325 RHGTKNWRTIACAIPGRNANSCLSRW 402
R WR+I CA+ ++NS S W
Sbjct: 397 RRARCRWRSIRCAVERASSNSRRSTW 320
>gb|CN814888.1|CN814888 HRO4503_E12_J23ZS5 Lib AA071E1X Avena sativa cv. Ogle-C root Avena
sativa cDNA clone HRO4503_E12_J23, mRNA sequence
Length = 751
Score = 26.8 bits (53), Expect = 2.2
Identities = 14/38 (36%), Positives = 16/38 (42%)
Frame = -3 / +2
Query: 431 LFIAGSRRYFHLERHELAFRPGIAHAIVRQFFVPCLFT 318
L A R H+E E A GIAH + C FT
Sbjct: 404 LVCATKARTIHIEEEEEALFRGIAHLVSASPLGSCRFT 517
Score = 25.4 bits (50), Expect = 7.6
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = +1 / -2
Query: 307 LKQMVKRHGTKNWRTIACAIPGRNANSCLS 396
L ++VKR K CA+P NA+S S
Sbjct: 528 LVELVKRQEPKGEADTRCAMPRNNASSSSS 439
>gb|CN816852.1|CN816852 HRO4525_E07_I13ZS5 Lib AA071E1X Avena sativa cv. Ogle-C root Avena
sativa cDNA clone HRO4525_E07_I13, mRNA sequence
Length = 686
Score = 26.8 bits (53), Expect = 2.2
Identities = 11/28 (39%), Positives = 14/28 (50%)
Frame = +3 / -2
Query: 174 CGTVPRRGIRRDRGTSSQENCPELHGEQ 257
C P R G+ SQE P+L G+Q
Sbjct: 196 CRYSPHTACRSLHGSQSQERSPQLSGDQ 113
>gb|CN820755.1|CN820755 HRO4414_D03_G06ZS5 Lib AA069E1X Avena sativa cv. Ogle-C etiolated
leaf Avena sativa cDNA clone HRO4414_D03_G06, mRNA
sequence
Length = 708
Score = 26.8 bits (53), Expect = 2.2
Identities = 11/32 (34%), Positives = 20/32 (62%)
Frame = +2 / -2
Query: 56 SRVVMGCQSASGGLTVQQNTQASQMRLLKTCC 151
+R+ + +SGG T Q+++ +S+ LL CC
Sbjct: 350 ARLALSGLPSSGGRTSQRSSCSSRPPLLSECC 255
>gb|AY277385.1| Avena sativa 1,3-beta glucanase (Oglc13) gene, complete cds
Length = 3281
Score = 26.8 bits (53), Expect = 2.2
Identities = 9/23 (39%), Positives = 14/23 (60%)
Frame = +3 / +3
Query: 357 MCYTWPKCQLMPFKMEVPSRPSN 425
+C+ WP QL P+K + R S+
Sbjct: 627 LCFEWPHFQLFPWKKDGMRRRSS 695
>gb|CN820542.1|CN820542 HRO4413_E11_I21ZS5 Lib AA069E1X Avena sativa cv. Ogle-C etiolated
leaf Avena sativa cDNA clone HRO4413_E11_I21, mRNA
sequence
Length = 454
Score = 26.3 bits (52), Expect = 3.1
Identities = 7/14 (50%), Positives = 9/14 (64%)
Frame = -1 / -2
Query: 295 PLMTICVFYFWNYC 254
PL +C+ FW YC
Sbjct: 132 PLRWVCLLNFWKYC 91
>gb|CN815850.1|CN815850 HRO4511_B09_D17ZS5 Lib AA071E1X Avena sativa cv. Ogle-C root Avena
sativa cDNA clone HRO4511_B09_D17, mRNA sequence
Length = 621
Score = 26.3 bits (52), Expect = 4.1
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = +1 / -2
Query: 217 PPHKKIVQNFTESSSSKNKKH 279
PPH K ++TE+ SS N H
Sbjct: 161 PPHVKEWHSYTETRSSHNPHH 99
>gb|CK780297.1|CK780297 umn364 UMN cDNA from oat Avena sativa cDNA clone JMT35 5', mRNA
sequence
Length = 656
Score = 25.9 bits (51), Expect = 4.2
Identities = 8/22 (36%), Positives = 11/22 (50%)
Frame = +3 / -2
Query: 369 WPKCQLMPFKMEVPSRPSNKQR 434
WP C L P P RP +++
Sbjct: 262 WPSCHLSPAPTTSPRRPPTERK 197
>gb|CN815315.1|CN815315 HRO4508_C12_F24ZS5 Lib AA071E1X Avena sativa cv. Ogle-C root Avena
sativa cDNA clone HRO4508_C12_F24, mRNA sequence
Length = 607
Score = 25.9 bits (51), Expect = 4.2
Identities = 14/42 (33%), Positives = 19/42 (45%)
Frame = -3 / -2
Query: 416 SRRYFHLERHELAFRPGIAHAIVRQFFVPCLFTICFSASSSS 291
+R H + H A RP ++ I F P CF +SSS
Sbjct: 348 ARAACHTQNHRAACRPRVSFMIQDAPFCPPN*ISCFLGASSS 223
>gb|CN816193.1|CN816193 HRO4518_A03_A06ZS5 Lib AA071E1X Avena sativa cv. Ogle-C root Avena
sativa cDNA clone HRO4518_A03_A06, mRNA sequence
Length = 655
Score = 25.9 bits (51), Expect = 4.2
Identities = 9/12 (75%), Positives = 11/12 (91%)
Frame = -3 / +3
Query: 341 FFVPCLFTICFS 306
F+VPCLF+I FS
Sbjct: 315 FYVPCLFSINFS 350
>gb|CN816209.1|CN816209 HRO4518_B08_C16ZS5 Lib AA071E1X Avena sativa cv. Ogle-C root Avena
sativa cDNA clone HRO4518_B08_C16, mRNA sequence
Length = 592
Score = 25.9 bits (51), Expect = 4.2
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = -1 / -2
Query: 430 CLLLGLEGTSILKGMSWHFGQV*HM 356
CLL+GL S +G+S H G H+
Sbjct: 273 CLLVGLSCRSTRRGLSSHLGT*NHL 199
>gb|CN816807.1|CN816807 HRO4525_A07_A13ZS5 Lib AA071E1X Avena sativa cv. Ogle-C root Avena
sativa cDNA clone HRO4525_A07_A13, mRNA sequence
Length = 770
Score = 25.9 bits (51), Expect = 4.2
Identities = 14/42 (33%), Positives = 19/42 (45%)
Frame = -3 / -2
Query: 416 SRRYFHLERHELAFRPGIAHAIVRQFFVPCLFTICFSASSSS 291
+R H + H A RP ++ I F P CF +SSS
Sbjct: 580 ARAACHTQNHRAACRPRVSFMIQDAPFCPPN*ISCFLGASSS 455
>gb|CN817273.1|CN817273 HRO4458_D08_H16ZS5 Lib AA070E1X Avena sativa cv. Ogle-C green leaf
Avena sativa cDNA clone HRO4458_D08_H16, mRNA sequence
Length = 565
Score = 25.9 bits (51), Expect = 4.2
Identities = 8/21 (38%), Positives = 13/21 (61%)
Frame = +3 / -2
Query: 336 EKLANYCMCYTWPKCQLMPFK 398
E+ +Y +CY +P L PF+
Sbjct: 420 EQYTSYSICYIFPSSWLRPFR 358
>gb|CN818814.1|CN818814 HRO4473_G03_XXXZS5 Lib AA070E1X Avena sativa cv. Ogle-C green leaf
Avena sativa cDNA clone HRO4473_G03_XXX, mRNA sequence
Length = 672
Score = 25.9 bits (51), Expect = 4.2
Identities = 11/30 (36%), Positives = 16/30 (53%)
Frame = -3 / -2
Query: 170 SCGILLCNMSSATSSDLLECFVELLALRWL 81
+C LLC ++S +S C + LRWL
Sbjct: 506 ACFSLLCTLTSFITSSSTLCCSTVANLRWL 417
>gb|CN819204.1|CN819204 HRO4451_D01_G01ZS5 Lib AA070E1X Avena sativa cv. Ogle-C green leaf
Avena sativa cDNA clone HRO4451_D01_G01, mRNA sequence
Length = 717
Score = 25.9 bits (51), Expect = 4.2
Identities = 8/21 (38%), Positives = 12/21 (57%)
Frame = -3 / -1
Query: 509 TILHHLFP*TCCARINLSSSC 447
T+LHH+ P CC + +C
Sbjct: 288 TLLHHVVPLRCCLYLQRHYTC 226
>gb|CN819271.1|CN819271 HRO4452_A09_A18ZS5 Lib AA070E1X Avena sativa cv. Ogle-C green leaf
Avena sativa cDNA clone HRO4452_A09_A18, mRNA sequence
Length = 357
Score = 25.9 bits (51), Expect = 4.2
Identities = 9/23 (39%), Positives = 10/23 (43%)
Frame = +3 / -2
Query: 324 KTWDEKLANYCMCYTWPKCQLMP 392
K W L+ C C W C L P
Sbjct: 170 KRWRTALSR*CSCQKWTHCLLGP 102
>gb|CN820587.1|CN820587 HRO4415_B07_D13ZS5 Lib AA069E1X Avena sativa cv. Ogle-C etiolated
leaf Avena sativa cDNA clone HRO4415_B07_D13, mRNA
sequence
Length = 784
Score = 25.9 bits (51), Expect = 4.2
Identities = 8/21 (38%), Positives = 12/21 (57%)
Frame = +2 / +2
Query: 137 LKTCCRVIYHMKLWDCAKAWN 199
L CC +YH +L+ C +N
Sbjct: 524 LHICCIHLYHEELYTCISCYN 586
>gb|BE439333.1|BE439333 CDO1312_WHE05E12F ITEC CDO Oat cDNA Library Avena sativa cDNA clone
CDO1312_WHE05E12, mRNA sequence
Length = 465
Score = 25.9 bits (51), Expect = 5.6
Identities = 13/32 (40%), Positives = 17/32 (53%)
Frame = +1 / -3
Query: 241 NFTESSSSKNKKHRWSSEEDEALKQMVKRHGT 336
+F +S S++ K W SE D KQ HGT
Sbjct: 436 SFYKSFSTELKDIVWKSESDATTKQSR*WHGT 341
Score = 25.0 bits (49), Expect = 8.0
Identities = 12/33 (36%), Positives = 13/33 (39%)
Frame = -3 / +3
Query: 335 VPCLFTICFSASSSSDDHXXXXXXXXXLSVKFW 237
VPC CF +S SD H L K W
Sbjct: 342 VPCHHRDCFVVASDSDFHTMSFSSVEKLL*KLW 440
>gb|CN815480.1|CN815480 HRO4512_B04_D08ZS5 Lib AA071E1X Avena sativa cv. Ogle-C root Avena
sativa cDNA clone HRO4512_B04_D08, mRNA sequence
Length = 604
Score = 25.9 bits (51), Expect = 5.6
Identities = 8/21 (38%), Positives = 13/21 (61%)
Frame = +1 / -2
Query: 469 RAQQVYGNKWCKMVKHFPGRT 531
R + + N W K ++FPGR+
Sbjct: 303 RGKSILRNSWIKWHRNFPGRS 241
>gb|CN818654.1|CN818654 HRO4467_E10_I19ZS5 Lib AA070E1X Avena sativa cv. Ogle-C green leaf
Avena sativa cDNA clone HRO4467_E10_I19, mRNA sequence
Length = 842
Score = 25.9 bits (51), Expect = 5.6
Identities = 9/30 (30%), Positives = 15/30 (50%)
Frame = +1 / +2
Query: 397 RWKYLLDPAINKEPWSQQEELRLIRAQQVY 486
RWKY ++ + PWS L ++V+
Sbjct: 626 RWKYCVEITRRRSPWSLSRSLTRHSEREVH 715
>gb|CN818757.1|CN818757 HRO4468_C07_E14ZS5 Lib AA070E1X Avena sativa cv. Ogle-C green leaf
Avena sativa cDNA clone HRO4468_C07_E14, mRNA sequence
Length = 805
Score = 25.9 bits (51), Expect = 5.6
Identities = 13/55 (23%), Positives = 22/55 (40%)
Frame = +1 / +3
Query: 208 IEGPPHKKIVQNFTESSSSKNKKHRWSSEEDEALKQMVKRHGTKNWRTIACAIPG 372
++ PP K ++ + W S ++M +G KN IA +PG
Sbjct: 126 LDWPPDKIKDESCWSDKELCKENENWYSLAKTTAEEMALEYGLKNGLHIATLLPG 290
>emb|AJ780932.1| Avena damascena partial rga gene for putative resistance protein,
clone DamII-7
Length = 436
Score = 25.9 bits (51), Expect = 5.6
Identities = 12/38 (31%), Positives = 19/38 (50%)
Frame = +1 / +2
Query: 445 QQEELRLIRAQQVYGNKWCKMVKHFPGRTNDALKEHWK 558
+ E+ R + V+G++ C KHF T D + E K
Sbjct: 323 ESEDFRKLFLTFVFGDEQCPRDKHFLLDTGDKIMEKLK 436
>gb|BE439103.1|BE439103 CDO122_WHE2C0082F ITEC CDO Oat cDNA Library Avena sativa cDNA clone
CDO122_WHE2C0082, mRNA sequence
Length = 437
Score = 25.4 bits (50), Expect = 5.8
Identities = 10/20 (50%), Positives = 11/20 (55%)
Frame = -3 / -1
Query: 512 LTILHHLFP*TCCARINLSS 453
L HHL TCC + LSS
Sbjct: 77 LVSFHHLLNDTCCGPVMLSS 18
>gb|CK780244.1|CK780244 umn107 UMN cDNA from oat Avena sativa cDNA clone JMT4_E01 5', mRNA
sequence
Length = 564
Score = 25.4 bits (50), Expect = 5.8
Identities = 9/19 (47%), Positives = 12/19 (63%)
Frame = -3 / +1
Query: 410 RYFHLERHELAFRPGIAHA 354
+Y H E H L FRP + H+
Sbjct: 58 KYSHEEPHVLMFRPHVYHS 114
>gb|CN815586.1|CN815586 HRO4513_C10_E19ZS5 Lib AA071E1X Avena sativa cv. Ogle-C root Avena
sativa cDNA clone HRO4513_C10_E19, mRNA sequence
Length = 850
Score = 25.4 bits (50), Expect = 5.8
Identities = 10/43 (23%), Positives = 18/43 (41%)
Frame = -3 / -3
Query: 551 CSLSASFVLPGKCLTILHHLFP*TCCARINLSSSCCDQGSLFI 423
C L + G + L+ CC+ +CC GS+++
Sbjct: 794 CFL*MDIICAGNLIVSLYSKMYYACCSDGVTLLACCSHGSIYV 666
>gb|CN816299.1|CN816299 HRO4519_B10_D19ZS5 Lib AA071E1X Avena sativa cv. Ogle-C root Avena
sativa cDNA clone HRO4519_B10_D19, mRNA sequence
Length = 678
Score = 25.4 bits (50), Expect = 5.8
Identities = 11/29 (37%), Positives = 17/29 (58%)
Frame = +2 / -1
Query: 17 VVESELLIREQTWSRVVMGCQSASGGLTV 103
V+ S L + E +WS + C +S GLT+
Sbjct: 270 VILSALPL*EASWSSLFAACSGSSIGLTM 184
>gb|CN816580.1|CN816580 HRO4522_D06_G12ZS5 Lib AA071E1X Avena sativa cv. Ogle-C root Avena
sativa cDNA clone HRO4522_D06_G12, mRNA sequence
Length = 799
Score = 25.4 bits (50), Expect = 5.8
Identities = 9/12 (75%), Positives = 10/12 (83%)
Frame = -3 / -2
Query: 389 HELAFRPGIAHA 354
H LA RPG+AHA
Sbjct: 387 HHLAARPGLAHA 352
>gb|CN817879.1|CN817879 HRO4462_D06_H12ZS5 Lib AA070E1X Avena sativa cv. Ogle-C green leaf
Avena sativa cDNA clone HRO4462_D06_H12, mRNA sequence
Length = 426
Score = 25.4 bits (50), Expect = 5.8
Identities = 8/16 (50%), Positives = 11/16 (68%)
Frame = -3 / -2
Query: 533 FVLPGKCLTILHHLFP 486
F L +C+T HH+FP
Sbjct: 170 FGLQKRCMTFPHHIFP 123
>gb|CN820763.1|CN820763 HRO4414_E02_I04ZS5 Lib AA069E1X Avena sativa cv. Ogle-C etiolated
leaf Avena sativa cDNA clone HRO4414_E02_I04, mRNA
sequence
Length = 611
Score = 25.4 bits (50), Expect = 5.8
Identities = 7/24 (29%), Positives = 14/24 (58%)
Frame = -1 / -1
Query: 328 VFLPFALVPHLPLMTICVFYFWNY 257
+ + F + L + IC+++ WNY
Sbjct: 95 IVVTFIVTSGLHIRVICIYFPWNY 24
>gb|CN821583.1|CN821583 HRO4426_H12_O24ZS5 Lib AA069E1X Avena sativa cv. Ogle-C etiolated
leaf Avena sativa cDNA clone HRO4426_H12_O24, mRNA
sequence
Length = 810
Score = 25.4 bits (50), Expect = 5.8
Identities = 8/21 (38%), Positives = 12/21 (57%)
Frame = -1 / -2
Query: 340 FSSHVFLPFALVPHLPLMTIC 278
F H +L+PH P+ T+C
Sbjct: 680 FQPHGVAQISLLPHKPMKTLC 618
>gb|CN815034.1|CN815034 HRO4505_B06_C11ZS5 Lib AA071E1X Avena sativa cv. Ogle-C root Avena
sativa cDNA clone HRO4505_B06_C11, mRNA sequence
Length = 629
Score = 25.4 bits (50), Expect = 7.6
Identities = 9/21 (42%), Positives = 14/21 (66%)
Frame = +1 / -2
Query: 217 PPHKKIVQNFTESSSSKNKKH 279
PPH K ++TE+ SS ++ H
Sbjct: 268 PPHVKEWHSYTETRSSHSRHH 206
>gb|CN816873.1|CN816873 HRO4525_G05_M09ZS5 Lib AA071E1X Avena sativa cv. Ogle-C root Avena
sativa cDNA clone HRO4525_G05_M09, mRNA sequence
Length = 662
Score = 25.4 bits (50), Expect = 7.6
Identities = 9/21 (42%), Positives = 14/21 (66%)
Frame = +1 / -1
Query: 217 PPHKKIVQNFTESSSSKNKKH 279
PPH K ++TE+ SS ++ H
Sbjct: 215 PPHVKEWHSYTETRSSHSRHH 153
>gb|CN819006.1|CN819006 HRO4474_C08_F16ZS5 Lib AA070E1X Avena sativa cv. Ogle-C green leaf
Avena sativa cDNA clone HRO4474_C08_F16, mRNA sequence
Length = 760
Score = 25.4 bits (50), Expect = 7.6
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = +1 / -2
Query: 37 YPRADMEQSSDGLPISQRRANSST 108
+PRA + Q+S P+S R A+ T
Sbjct: 465 HPRAALRQASHSSPLSSRTASRRT 394
>gb|CN821452.1|CN821452 HRO4425_E04_I07ZS5 Lib AA069E1X Avena sativa cv. Ogle-C etiolated
leaf Avena sativa cDNA clone HRO4425_E04_I07, mRNA
sequence
Length = 739
Score = 25.4 bits (50), Expect = 7.6
Identities = 9/19 (47%), Positives = 11/19 (57%)
Frame = +1 / +2
Query: 172 TVGLCQGVESEEIEGPPHK 228
T G CQ + + EGP HK
Sbjct: 5 TRGACQNRHASDTEGPDHK 61
>gb|BE439347.1|BE439347 CDO1015_WHE05E08R ITEC CDO Oat cDNA Library Avena sativa cDNA clone
CDO1015_WHE05E08, mRNA sequence
Length = 443
Score = 25.0 bits (49), Expect = 8.0
Identities = 8/16 (50%), Positives = 11/16 (68%)
Frame = -3 / -2
Query: 215 PSISSDSTPWHSPTVS 168
PS+ S S PW S ++S
Sbjct: 190 PSVMSSSQPWRSDSIS 143
>gb|CN815881.1|CN815881 HRO4511_E06_J11ZS5 Lib AA071E1X Avena sativa cv. Ogle-C root Avena
sativa cDNA clone HRO4511_E06_J11, mRNA sequence
Length = 470
Score = 25.0 bits (49), Expect = 8.0
Identities = 6/13 (46%), Positives = 9/13 (69%)
Frame = +3 / +1
Query: 330 WDEKLANYCMCYT 368
WD++ YC C+T
Sbjct: 238 WDQRKTMYCKCFT 276
>gb|CN815996.1|CN815996 HRO4515_G03_N05ZS5 Lib AA071E1X Avena sativa cv. Ogle-C root Avena
sativa cDNA clone HRO4515_G03_N05, mRNA sequence
Length = 367
Score = 25.0 bits (49), Expect = 8.0
Identities = 10/25 (40%), Positives = 13/25 (52%)
Frame = -3 / +1
Query: 191 PWHSPTVSCGILLCNMSSATSSDLL 117
PW VSC + C SS+ + LL
Sbjct: 292 PWPGKCVSCEVFTCVYSSSIRAMLL 366
>gb|CN816334.1|CN816334 HRO4519_E10_J19ZS5 Lib AA071E1X Avena sativa cv. Ogle-C root Avena
sativa cDNA clone HRO4519_E10_J19, mRNA sequence
Length = 825
Score = 25.0 bits (49), Expect = 8.0
Identities = 8/10 (80%), Positives = 8/10 (80%)
Frame = +2 / -3
Query: 149 CRVIYHMKLW 178
CR IYH KLW
Sbjct: 688 CRWIYHAKLW 659
>gb|CN816430.1|CN816430 HRO4520_F07_L14ZS5 Lib AA071E1X Avena sativa cv. Ogle-C root Avena
sativa cDNA clone HRO4520_F07_L14, mRNA sequence
Length = 802
Score = 25.0 bits (49), Expect = 8.0
Identities = 14/40 (35%), Positives = 18/40 (45%)
Frame = -2 / -1
Query: 249 REVLDNFLVRRSLYLF*FHALAQSHSFMWYITLQHVFSNL 130
R L NF S FH S+M +TLQ +F +L
Sbjct: 331 RNFLMNFCASSSF*CVSFHPYPSFLSWMMILTLQRLFHDL 212
>gb|CN817101.1|CN817101 HRO4528_C03_F06ZS5 Lib AA071E1X Avena sativa cv. Ogle-C root Avena
sativa cDNA clone HRO4528_C03_F06, mRNA sequence
Length = 470
Score = 25.0 bits (49), Expect = 8.0
Identities = 6/13 (46%), Positives = 9/13 (69%)
Frame = +3 / +1
Query: 330 WDEKLANYCMCYT 368
WD++ YC C+T
Sbjct: 313 WDQRKTMYCKCFT 351
>gb|CN817386.1|CN817386 HRO4454_E07_J14ZS5 Lib AA070E1X Avena sativa cv. Ogle-C green leaf
Avena sativa cDNA clone HRO4454_E07_J14, mRNA sequence
Length = 496
Score = 25.0 bits (49), Expect = 8.0
Identities = 14/40 (35%), Positives = 18/40 (45%)
Frame = -2 / -2
Query: 249 REVLDNFLVRRSLYLF*FHALAQSHSFMWYITLQHVFSNL 130
R L NF S FH S+M +TLQ +F +L
Sbjct: 165 RNFLMNFCASSSF*CVSFHPYPSFLSWMMILTLQRLFHDL 46
>gb|CN817755.1|CN817755 HRO4461_C08_F15ZS5 Lib AA070E1X Avena sativa cv. Ogle-C green leaf
Avena sativa cDNA clone HRO4461_C08_F15, mRNA sequence
Length = 620
Score = 25.0 bits (49), Expect = 8.0
Identities = 6/13 (46%), Positives = 9/13 (69%)
Frame = +3 / +3
Query: 330 WDEKLANYCMCYT 368
WD++ YC C+T
Sbjct: 546 WDQRKTMYCKCFT 584
>gb|CN818072.1|CN818072 HRO4472_B07_C14ZS5 Lib AA070E1X Avena sativa cv. Ogle-C green leaf
Avena sativa cDNA clone HRO4472_B07_C14, mRNA sequence
Length = 822
Score = 25.0 bits (49), Expect = 8.0
Identities = 8/24 (33%), Positives = 13/24 (54%)
Frame = -1 / +1
Query: 334 SHVFLPFALVPHLPLMTICVFYFW 263
+ + + LVP LPL+ C + W
Sbjct: 265 ARMLIKLILVPCLPLVCTCFIHLW 336
>gb|CN818701.1|CN818701 HRO4467_H06_O11ZS5 Lib AA070E1X Avena sativa cv. Ogle-C green leaf
Avena sativa cDNA clone HRO4467_H06_O11, mRNA sequence
Length = 664
Score = 25.0 bits (49), Expect = 8.0
Identities = 13/34 (38%), Positives = 17/34 (50%)
Frame = -1 / +3
Query: 199 IPRLGTVPQFHVVYYSATCLQQPHLTCLSVLLNC 98
+P L + Q+H + S T HLTCL L C
Sbjct: 489 LPCLLIMVQYHNLRMSKTYSLPKHLTCLLWKLMC 590
>gb|CN821358.1|CN821358 HRO4424_D07_H14ZS5 Lib AA069E1X Avena sativa cv. Ogle-C etiolated
leaf Avena sativa cDNA clone HRO4424_D07_H14, mRNA
sequence
Length = 559
Score = 25.0 bits (49), Expect = 8.0
Identities = 9/15 (60%), Positives = 12/15 (80%)
Frame = -1 / -2
Query: 244 SSGQFSCEEVPLSLL 200
S+G FSC VP+S+L
Sbjct: 438 STGLFSCTSVPMSVL 394
Database: Avena_nucl_with_EST.fasta
Posted date: May 2, 2006 2:37 PM
Number of letters in database: 4,702,463
Number of sequences in database: 8143
Lambda K H
0.311 0.125 0.383
Matrix: BLOSUM62
Number of Hits to DB: 7,503,678
Number of Sequences: 8143
Number of extensions: 113413
Number of successful extensions: 1952
Number of sequences better than 10.0: 66
length of database: 1,567,487
effective HSP length: 44
effective length of database: 1,209,195
effective search space used: 170496495
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.2 bits)
X2: 0 ( 0.0 bits)
S1: 42 (21.8 bits)