TBLASTX 2.2.10 [Oct-19-2004]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 9009927.2.1
         (404 letters)

Database: Avena_nucl_with_EST.fasta 
           8143 sequences; 4,702,463 total letters



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|AJ133638.1|ASA133638  Avena sativa mRNA for myb protein        85   1e-032
>emb|AJ133638.1|ASA133638 Avena sativa mRNA for myb protein
          Length = 2287

 Score = 84.9 bits (179), Expect(2) = 1e-032
 Identities = 28/45 (62%), Positives = 36/45 (80%)
 Frame = +1 / +2

                                                        
Query: 1   YIQEHGPGNWRSVPINTGLMRCSKSCRLRWTNYLRPGIRRGNFTP 135
           Y+++HG GNW +V  NTGL RC KSCRLRW N+LRP +++G FTP
Sbjct: 431 YVKKHGEGNWNAVQKNTGLFRCGKSCRLRWANHLRPNLKKGAFTP 565

 Score = 68.9 bits (144), Expect(2) = 1e-032
 Identities = 24/41 (58%), Positives = 33/41 (80%)
 Frame = +3 / +2

                                                    
Query: 141 EEAIIVHLQSLLGNRWAAIASYLPQRTDNDIKNYWNTHLKK 263
           EE +I+ L S +GN+WA +A+ LP RTDN+IKNYWNT +K+
Sbjct: 569 EERLIIQLHSKMGNKWARMAANLPGRTDNEIKNYWNTRIKR 691
  Database: Avena_nucl_with_EST.fasta
    Posted date:  Feb 7, 2006  2:15 PM
  Number of letters in database: 4,702,463
  Number of sequences in database:  8143
  
Lambda     K      H
   0.318    0.134    0.401 


Matrix: BLOSUM62
Number of Hits to DB: 2,695,510
Number of Sequences: 8143
Number of extensions: 26362
Number of successful extensions: 1761
Number of sequences better than 1.0e-020: 2
length of database: 1,567,487
effective HSP length: 41
effective length of database: 1,233,624
effective search space used: 114727032
frameshift window, decay const: 40,  0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)