TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 8010745.2.1
(805 letters)
Database: Avena_nucl_with_EST.fasta
8143 sequences; 4,702,463 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CN816521.1|CN816521 HRO4521_G01_M01ZS5 Lib AA071E1X Aven... 210 1e-059
gb|CN815410.1|CN815410 HRO4509_D02_G03ZS5 Lib AA071E1X Aven... 140 3e-034
gb|CN820950.1|CN820950 HRO4421_G11_M21ZS5 Lib AA069E1X Aven... 103 1e-026
gb|CN815884.1|CN815884 HRO4511_E10_J19ZS5 Lib AA071E1X Aven... 103 1e-026
gb|CN821160.1|CN821160 HRO4428_B09_D18ZS5 Lib AA069E1X Aven... 106 2e-026
gb|CN815195.1|CN815195 HRO4506_H10_O20ZS5 Lib AA071E1X Aven... 107 2e-025
gb|CN814852.1|CN814852 HRO4503_B11_D21ZS5 Lib AA071E1X Aven... 109 7e-025
gb|CN820578.1|CN820578 HRO4415_A09_B17ZS5 Lib AA069E1X Aven... 77 2e-023
gb|CN819567.1|CN819567 HRO4401_F08_K15ZS5 Lib AA069E1X Aven... 77 4e-023
gb|CN819927.1|CN819927 HRO4407_H12_P23ZS5 Lib AA069E1X Aven... 77 4e-023
gb|CN821151.1|CN821151 HRO4428_A10_B20ZS5 Lib AA069E1X Aven... 77 4e-023
gb|CN821463.1|CN821463 HRO4425_F05_K09ZS5 Lib AA069E1X Aven... 77 4e-023
gb|CN820938.1|CN820938 HRO4421_F11_K21ZS5 Lib AA069E1X Aven... 77 4e-023
gb|CN819387.1|CN819387 HRO4405_D06_G11ZS5 Lib AA069E1X Aven... 77 4e-023
gb|CN821349.1|CN821349 HRO4424_C10_F20ZS5 Lib AA069E1X Aven... 103 5e-023
gb|AF082991.1|AF082991 Avena sativa beta-D-glucosidase beta... 77 1e-022
gb|CN819479.1|CN819479 HRO4406_E06_I12ZS5 Lib AA069E1X Aven... 74 2e-022
gb|CN821286.1|CN821286 HRO4423_F02_L03ZS5 Lib AA069E1X Aven... 77 3e-022
gb|CN818092.1|CN818092 HRO4456_E12_I24ZS5 Lib AA070E1X Aven... 86 3e-021
>gb|CN816521.1|CN816521 HRO4521_G01_M01ZS5 Lib AA071E1X Avena sativa cv. Ogle-C root Avena
sativa cDNA clone HRO4521_G01_M01, mRNA sequence
Length = 694
Score = 210 bits (452), Expect(2) = 1e-059
Identities = 79/130 (60%), Positives = 102/130 (78%)
Frame = -2 / +1
Query: 546 DGVKIGGDTALAGFFDVPEAIELAIQYVNGRYKGTPVYITENGYXQWSDASREELIDDVR 367
DGV+IG TAL GF+DVPE +E ++YV RY TP+YITENGY Q S + E +++D+
Sbjct: 64 DGVQIGKSTALLGFYDVPEGMEQILKYVTQRYGNTPIYITENGYSQHSSNNMEAMLNDID 243
Query: 366 RKNYLQGYITYLSKALRNGANVRGYFVWTLLDNFEWAFGYRLKYGLYHVDFDTQERTXRM 187
R NYLQGY++ +S ALR GANVRGYFVW+L+DNFEW FG+ +++GLYHVD TQ+RT +M
Sbjct: 244 RVNYLQGYLSSISSALRRGANVRGYFVWSLIDNFEWLFGFTVRFGLYHVDLATQKRTPKM 423
Query: 186 SARWYQGFLT 157
SA WY+ FLT
Sbjct: 424 SAEWYRDFLT 453
Score = 118 bits (253), Expect = 9e-028
Identities = 65/122 (53%), Positives = 69/122 (56%)
Frame = +2 / -3
Query: 158 VRKPWYHLADIRXVLSWVSKSTWYSPYFNL*PNAHSKLSSSVHTK*PRTFAPFLSALDRY 337
VRK YH ADI VL V+KSTW SP + P +HSKLS +HTK*PRTFAP L A D
Sbjct: 452 VRKSRYHSADIFGVLFCVAKSTW*SPNLTVKPKSHSKLSMRLHTK*PRTFAPLLRAEDID 273
Query: 338 VM*PCR*FFXXXXXXXXXXXXXXHCX*PFSVIYTGVPLYLPFTYWIASSMASGTSKKPAR 517
*PCR*F C *PFSVI GV YL TY SM SGTS KP
Sbjct: 272 DR*PCR*FTLSMSLSMASILLLLCCE*PFSVI*IGVFPYL*VTYLRICSMPSGTS*KPRS 93
Query: 518 AV 523
AV
Sbjct: 92 AV 87
Score = 105 bits (225), Expect = 7e-024
Identities = 58/140 (41%), Positives = 78/140 (55%)
Frame = -1 / +3
Query: 520 CSGRFLRRPRGHRAGYPVREREVQGHACVYY*ERLLAVE*CQQGGADRRCEEEELPAGLH 341
C+ FLR R H A V E++ H +YY*ERLL +* Q G + + +LP GL
Sbjct: 90 CTSWFLRCSRRHGADPQVCNSEIREHTYLYY*ERLLTTQ**QYGSHAQ*H*QSKLPTGLS 269
Query: 340 HVSIQSTQERSKRAGLLRVDAAGQLRVGVRLQVEVRAVPRXLRHPGEDAPDVCEVVPGLP 161
V I S+QERSKRA LLRV++ QLRV +V A+P + ED+ DVC VVP LP
Sbjct: 270 IVYIFSSQERSKRAWLLRVESHRQLRVAFWFHSKVWALPCGFSNAKEDSKDVCRVVP*LP 449
Query: 160 HGXHQPARRSREGTESRLVM 101
+G +R + +V+
Sbjct: 450 NGFRAGGESARSKSRFLIVL 509
Score = 35.0 bits (70), Expect(2) = 1e-059
Identities = 14/18 (77%), Positives = 15/18 (83%)
Frame = -2 / +1
Query: 600 NLGSYEGNAFVSATGERD 547
NL +YEGNA V ATGERD
Sbjct: 13 NLKTYEGNALVFATGERD 66
>gb|CN815410.1|CN815410 HRO4509_D02_G03ZS5 Lib AA071E1X Avena sativa cv. Ogle-C root Avena
sativa cDNA clone HRO4509_D02_G03, mRNA sequence
Length = 578
Score = 140 bits (300), Expect = 3e-034
Identities = 50/78 (64%), Positives = 66/78 (84%)
Frame = -2 / +2
Query: 390 EELIDDVRRKNYLQGYITYLSKALRNGANVRGYFVWTLLDNFEWAFGYRLKYGLYHVDFD 211
E++I+DV R NYL+GY++ +S A+R G NVRGYFVW+L+DNFEW FG+ +++GLYHVDF
Sbjct: 5 EDMINDVGRVNYLRGYLSSISSAIRGGGNVRGYFVWSLMDNFEWVFGFTVRFGLYHVDFA 184
Query: 210 TQERTXRMSARWYQGFLT 157
TQERT +MSA WY+ FLT
Sbjct: 185 TQERTPKMSAEWYRDFLT 238
>gb|CN820950.1|CN820950 HRO4421_G11_M21ZS5 Lib AA069E1X Avena sativa cv. Ogle-C etiolated
leaf Avena sativa cDNA clone HRO4421_G11_M21, mRNA
sequence
Length = 840
Score = 103 bits (219), Expect(2) = 1e-026
Identities = 41/113 (36%), Positives = 64/113 (56%)
Frame = -2 / +3
Query: 546 DGVKIGGDTALAGFFDVPEAIELAIQYVNGRYKGTPVYITENGYXQWSDASREELIDDVR 367
+G IG + P + + Y+ +Y V+ITENG Q + + ++ + D
Sbjct: 336 NGKPIGPKANSDWLYIAPFGMYGCVNYIKQKYGNPAVFITENGMDQPGNLTLDQYLRDTT 515
Query: 366 RKNYLQGYITYLSKALRNGANVRGYFVWTLLDNFEWAFGYRLKYGLYHVDFDT 208
R + + Y+ L K + NGANV GYF W+LLDNFEW+ GY K+G+ +VDF++
Sbjct: 516 RVRFYRSYLNELKKGIDNGANVVGYFAWSLLDNFEWSSGYTSKFGIVYVDFNS 674
Score = 31.3 bits (62), Expect(2) = 1e-026
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = -2 / +3
Query: 693 EKALLLRYKADFIGLNHYTAIYAR 622
++A L++ AD+IG+N YTA Y +
Sbjct: 192 DQAKLVKGSADYIGINQYTASYMK 263
>gb|CN815884.1|CN815884 HRO4511_E10_J19ZS5 Lib AA071E1X Avena sativa cv. Ogle-C root Avena
sativa cDNA clone HRO4511_E10_J19, mRNA sequence
Length = 707
Score = 103 bits (219), Expect(2) = 1e-026
Identities = 41/113 (36%), Positives = 64/113 (56%)
Frame = -2 / +2
Query: 546 DGVKIGGDTALAGFFDVPEAIELAIQYVNGRYKGTPVYITENGYXQWSDASREELIDDVR 367
+G IG + P + + Y+ +Y V+ITENG Q + + ++ + D
Sbjct: 251 NGKPIGPKANSDWLYIAPFGMYGCVNYIKQKYGNPAVFITENGMDQPGNLTLDQYLRDTT 430
Query: 366 RKNYLQGYITYLSKALRNGANVRGYFVWTLLDNFEWAFGYRLKYGLYHVDFDT 208
R + + Y+ L K + NGANV GYF W+LLDNFEW+ GY K+G+ +VDF++
Sbjct: 431 RVRFYRSYLNELKKGIDNGANVVGYFAWSLLDNFEWSSGYTSKFGIVYVDFNS 589
Score = 31.3 bits (62), Expect(2) = 1e-026
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = -2 / +2
Query: 693 EKALLLRYKADFIGLNHYTAIYAR 622
++A L++ AD+IG+N YTA Y +
Sbjct: 107 DQAKLVKGSADYIGINQYTASYMK 178
>gb|CN821160.1|CN821160 HRO4428_B09_D18ZS5 Lib AA069E1X Avena sativa cv. Ogle-C etiolated
leaf Avena sativa cDNA clone HRO4428_B09_D18, mRNA
sequence
Length = 678
Score = 106 bits (226), Expect(2) = 2e-026
Identities = 42/113 (37%), Positives = 65/113 (57%)
Frame = -2 / +1
Query: 546 DGVKIGGDTALAGFFDVPEAIELAIQYVNGRYKGTPVYITENGYXQWSDASREELIDDVR 367
+G IG + P + + Y+ +Y V+ITENG Q + +R++ + D
Sbjct: 133 NGKPIGPKANSDWLYMAPFGMYGCVNYIKQKYGNPAVFITENGMDQPGNLTRDQYLRDTT 312
Query: 366 RKNYLQGYITYLSKALRNGANVRGYFVWTLLDNFEWAFGYRLKYGLYHVDFDT 208
R + + Y+ L K + NGANV GYF W+LLDNFEW+ GY K+G+ +VDF++
Sbjct: 313 RVRFYRSYLNELKKGIDNGANVVGYFAWSLLDNFEWSSGYTSKFGIVYVDFNS 471
Score = 27.2 bits (53), Expect(2) = 2e-026
Identities = 9/15 (60%), Positives = 12/15 (80%)
Frame = -2 / +1
Query: 666 ADFIGLNHYTAIYAR 622
AD+IG+N YTA Y +
Sbjct: 16 ADYIGINQYTASYMK 60
>gb|CN815195.1|CN815195 HRO4506_H10_O20ZS5 Lib AA071E1X Avena sativa cv. Ogle-C root Avena
sativa cDNA clone HRO4506_H10_O20, mRNA sequence
Length = 270
Score = 107 bits (229), Expect(2) = 2e-025
Identities = 42/77 (54%), Positives = 57/77 (74%)
Frame = -2 / +2
Query: 546 DGVKIGGDTALAGFFDVPEAIELAIQYVNGRYKGTPVYITENGYXQWSDASREELIDDVR 367
DGV+IG TAL GF+DVPE +E ++YV RY TP+YITENGY Q S + E +++D+
Sbjct: 38 DGVQIGKSTALLGFYDVPEGMEQILKYVTQRYGNTPIYITENGYSQHSSNNMEAMLNDID 217
Query: 366 RKNYLQGYITYLSKALR 316
R NYL+GY++ +S ALR
Sbjct: 218 RVNYLRGYLSSISSALR 268
Score = 22.6 bits (43), Expect(2) = 2e-025
Identities = 9/12 (75%), Positives = 9/12 (75%)
Frame = -2 / +2
Query: 582 GNAFVSATGERD 547
G A V ATGERD
Sbjct: 5 GEALVFATGERD 40
>gb|CN814852.1|CN814852 HRO4503_B11_D21ZS5 Lib AA071E1X Avena sativa cv. Ogle-C root Avena
sativa cDNA clone HRO4503_B11_D21, mRNA sequence
Length = 502
Score = 109 bits (232), Expect = 7e-025
Identities = 39/56 (69%), Positives = 48/56 (85%)
Frame = -2 / +3
Query: 324 ALRNGANVRGYFVWTLLDNFEWAFGYRLKYGLYHVDFDTQERTXRMSARWYQGFLT 157
ALR GANVRGYFVW+L+DNFEW FG+ +++GLYHVD TQ+RT +MSA WY+ FLT
Sbjct: 15 ALRRGANVRGYFVWSLIDNFEWLFGFTVRFGLYHVDLATQKRTPKMSAEWYRDFLT 182
>gb|CN820578.1|CN820578 HRO4415_A09_B17ZS5 Lib AA069E1X Avena sativa cv. Ogle-C etiolated
leaf Avena sativa cDNA clone HRO4415_A09_B17, mRNA
sequence
Length = 700
Score = 77.1 bits (162), Expect(3) = 2e-023
Identities = 26/64 (40%), Positives = 44/64 (68%)
Frame = -2 / -1
Query: 408 WSDASREELIDDVRRKNYLQGYITYLSKALRNGANVRGYFVWTLLDNFEWAFGYRLKYGL 229
W + + +DD R YLQ ++T + +A+ GA+VRG+F W+L+DNFEW+ GY ++G+
Sbjct: 433 WGNPPMTDPLDDPLRIEYLQQHMTAIKEAIDLGADVRGHFTWSLIDNFEWSLGYLSRFGI 254
Query: 228 YHVD 217
++D
Sbjct: 253 VYID 242
Score = 37.3 bits (75), Expect(3) = 2e-023
Identities = 13/43 (30%), Positives = 24/43 (55%)
Frame = -2 / -1
Query: 546 DGVKIGGDTALAGFFDVPEAIELAIQYVNGRYKGTPVYITENG 418
+G+ IG D + + P+ ++ + + +Y P+YITENG
Sbjct: 580 NGIPIGPDVGMYFIYSYPKGLKNILLRMKEKYGNPPIYITENG 452
Score = 26.7 bits (52), Expect(3) = 2e-023
Identities = 9/20 (45%), Positives = 15/20 (75%)
Frame = -2 / -1
Query: 663 DFIGLNHYTAIYARDCLRSP 604
DF+G+N+YT+ +A+ SP
Sbjct: 700 DFVGINYYTSRFAKHIDISP 641
>gb|CN819567.1|CN819567 HRO4401_F08_K15ZS5 Lib AA069E1X Avena sativa cv. Ogle-C etiolated
leaf Avena sativa cDNA clone HRO4401_F08_K15, mRNA
sequence
Length = 869
Score = 77.1 bits (162), Expect(3) = 4e-023
Identities = 26/64 (40%), Positives = 44/64 (68%)
Frame = -2 / +2
Query: 408 WSDASREELIDDVRRKNYLQGYITYLSKALRNGANVRGYFVWTLLDNFEWAFGYRLKYGL 229
W + + +DD R YLQ ++T + +A+ GA+VRG+F W+L+DNFEW+ GY ++G+
Sbjct: 374 WGNPPMTDPLDDPLRIEYLQQHMTAIKEAIDLGADVRGHFTWSLIDNFEWSLGYLSRFGI 553
Query: 228 YHVD 217
++D
Sbjct: 554 VYID 565
Score = 37.3 bits (75), Expect(3) = 4e-023
Identities = 13/43 (30%), Positives = 24/43 (55%)
Frame = -2 / +2
Query: 546 DGVKIGGDTALAGFFDVPEAIELAIQYVNGRYKGTPVYITENG 418
+G+ IG D + + P+ ++ + + +Y P+YITENG
Sbjct: 227 NGIPIGPDVGMYFIYSYPKGLKNILLRMKEKYGNPPIYITENG 355
Score = 25.8 bits (50), Expect(3) = 4e-023
Identities = 7/14 (50%), Positives = 13/14 (92%)
Frame = -2 / +2
Query: 663 DFIGLNHYTAIYAR 622
DF+G+N+YT+ +A+
Sbjct: 107 DFVGINYYTSRFAK 148
>gb|CN819927.1|CN819927 HRO4407_H12_P23ZS5 Lib AA069E1X Avena sativa cv. Ogle-C etiolated
leaf Avena sativa cDNA clone HRO4407_H12_P23, mRNA
sequence
Length = 832
Score = 77.1 bits (162), Expect(3) = 4e-023
Identities = 26/64 (40%), Positives = 44/64 (68%)
Frame = -2 / +2
Query: 408 WSDASREELIDDVRRKNYLQGYITYLSKALRNGANVRGYFVWTLLDNFEWAFGYRLKYGL 229
W + + +DD R YLQ ++T + +A+ GA+VRG+F W+L+DNFEW+ GY ++G+
Sbjct: 560 WGNPPMTDPLDDPLRIEYLQQHMTAIKEAIDLGADVRGHFTWSLIDNFEWSLGYLSRFGI 739
Query: 228 YHVD 217
++D
Sbjct: 740 VYID 751
Score = 37.3 bits (75), Expect(3) = 4e-023
Identities = 13/43 (30%), Positives = 24/43 (55%)
Frame = -2 / +2
Query: 546 DGVKIGGDTALAGFFDVPEAIELAIQYVNGRYKGTPVYITENG 418
+G+ IG D + + P+ ++ + + +Y P+YITENG
Sbjct: 413 NGIPIGPDVGMYFIYSYPKGLKNILLRMKEKYGNPPIYITENG 541
Score = 25.8 bits (50), Expect(3) = 4e-023
Identities = 7/14 (50%), Positives = 13/14 (92%)
Frame = -2 / +2
Query: 663 DFIGLNHYTAIYAR 622
DF+G+N+YT+ +A+
Sbjct: 293 DFVGINYYTSRFAK 334
>gb|CN821151.1|CN821151 HRO4428_A10_B20ZS5 Lib AA069E1X Avena sativa cv. Ogle-C etiolated
leaf Avena sativa cDNA clone HRO4428_A10_B20, mRNA
sequence
Length = 826
Score = 77.1 bits (162), Expect(3) = 4e-023
Identities = 26/64 (40%), Positives = 44/64 (68%)
Frame = -2 / +2
Query: 408 WSDASREELIDDVRRKNYLQGYITYLSKALRNGANVRGYFVWTLLDNFEWAFGYRLKYGL 229
W + + +DD R YLQ ++T + +A+ GA+VRG+F W+L+DNFEW+ GY ++G+
Sbjct: 440 WGNPPMTDPLDDPLRIEYLQQHMTAIKEAIDLGADVRGHFTWSLIDNFEWSLGYLSRFGI 619
Query: 228 YHVD 217
++D
Sbjct: 620 VYID 631
Score = 37.3 bits (75), Expect(3) = 4e-023
Identities = 13/43 (30%), Positives = 24/43 (55%)
Frame = -2 / +2
Query: 546 DGVKIGGDTALAGFFDVPEAIELAIQYVNGRYKGTPVYITENG 418
+G+ IG D + + P+ ++ + + +Y P+YITENG
Sbjct: 293 NGIPIGPDVGMYFIYSYPKGLKNILLRMKEKYGNPPIYITENG 421
Score = 25.8 bits (50), Expect(3) = 4e-023
Identities = 7/14 (50%), Positives = 13/14 (92%)
Frame = -2 / +2
Query: 663 DFIGLNHYTAIYAR 622
DF+G+N+YT+ +A+
Sbjct: 173 DFVGINYYTSRFAK 214
>gb|CN821463.1|CN821463 HRO4425_F05_K09ZS5 Lib AA069E1X Avena sativa cv. Ogle-C etiolated
leaf Avena sativa cDNA clone HRO4425_F05_K09, mRNA
sequence
Length = 812
Score = 77.1 bits (162), Expect(3) = 4e-023
Identities = 26/64 (40%), Positives = 44/64 (68%)
Frame = -2 / +3
Query: 408 WSDASREELIDDVRRKNYLQGYITYLSKALRNGANVRGYFVWTLLDNFEWAFGYRLKYGL 229
W + + +DD R YLQ ++T + +A+ GA+VRG+F W+L+DNFEW+ GY ++G+
Sbjct: 558 WGNPPMTDPLDDPLRIEYLQQHMTAIKEAIDLGADVRGHFTWSLIDNFEWSLGYLSRFGI 737
Query: 228 YHVD 217
++D
Sbjct: 738 VYID 749
Score = 37.3 bits (75), Expect(3) = 4e-023
Identities = 13/43 (30%), Positives = 24/43 (55%)
Frame = -2 / +3
Query: 546 DGVKIGGDTALAGFFDVPEAIELAIQYVNGRYKGTPVYITENG 418
+G+ IG D + + P+ ++ + + +Y P+YITENG
Sbjct: 411 NGIPIGPDVGMYFIYSYPKGLKNILLRMKEKYGNPPIYITENG 539
Score = 25.8 bits (50), Expect(3) = 4e-023
Identities = 7/14 (50%), Positives = 13/14 (92%)
Frame = -2 / +3
Query: 663 DFIGLNHYTAIYAR 622
DF+G+N+YT+ +A+
Sbjct: 291 DFVGINYYTSRFAK 332
>gb|CN820938.1|CN820938 HRO4421_F11_K21ZS5 Lib AA069E1X Avena sativa cv. Ogle-C etiolated
leaf Avena sativa cDNA clone HRO4421_F11_K21, mRNA
sequence
Length = 808
Score = 77.1 bits (162), Expect(3) = 4e-023
Identities = 26/64 (40%), Positives = 44/64 (68%)
Frame = -2 / +3
Query: 408 WSDASREELIDDVRRKNYLQGYITYLSKALRNGANVRGYFVWTLLDNFEWAFGYRLKYGL 229
W + + +DD R YLQ ++T + +A+ GA+VRG+F W+L+DNFEW+ GY ++G+
Sbjct: 435 WGNPPMTDPLDDPLRIEYLQQHMTAIKEAIDLGADVRGHFTWSLIDNFEWSLGYLSRFGI 614
Query: 228 YHVD 217
++D
Sbjct: 615 VYID 626
Score = 37.3 bits (75), Expect(3) = 4e-023
Identities = 13/43 (30%), Positives = 24/43 (55%)
Frame = -2 / +3
Query: 546 DGVKIGGDTALAGFFDVPEAIELAIQYVNGRYKGTPVYITENG 418
+G+ IG D + + P+ ++ + + +Y P+YITENG
Sbjct: 288 NGIPIGPDVGMYFIYSYPKGLKNILLRMKEKYGNPPIYITENG 416
Score = 25.8 bits (50), Expect(3) = 4e-023
Identities = 7/14 (50%), Positives = 13/14 (92%)
Frame = -2 / +3
Query: 663 DFIGLNHYTAIYAR 622
DF+G+N+YT+ +A+
Sbjct: 168 DFVGINYYTSRFAK 209
>gb|CN819387.1|CN819387 HRO4405_D06_G11ZS5 Lib AA069E1X Avena sativa cv. Ogle-C etiolated
leaf Avena sativa cDNA clone HRO4405_D06_G11, mRNA
sequence
Length = 798
Score = 77.1 bits (162), Expect(3) = 4e-023
Identities = 26/64 (40%), Positives = 44/64 (68%)
Frame = -2 / +1
Query: 408 WSDASREELIDDVRRKNYLQGYITYLSKALRNGANVRGYFVWTLLDNFEWAFGYRLKYGL 229
W + + +DD R YLQ ++T + +A+ GA+VRG+F W+L+DNFEW+ GY ++G+
Sbjct: 367 WGNPPMTDPLDDPLRIEYLQQHMTAIKEAIDLGADVRGHFTWSLIDNFEWSLGYLSRFGI 546
Query: 228 YHVD 217
++D
Sbjct: 547 VYID 558
Score = 37.3 bits (75), Expect(3) = 4e-023
Identities = 13/43 (30%), Positives = 24/43 (55%)
Frame = -2 / +1
Query: 546 DGVKIGGDTALAGFFDVPEAIELAIQYVNGRYKGTPVYITENG 418
+G+ IG D + + P+ ++ + + +Y P+YITENG
Sbjct: 220 NGIPIGPDVGMYFIYSYPKGLKNILLRMKEKYGNPPIYITENG 348
Score = 25.8 bits (50), Expect(3) = 4e-023
Identities = 7/14 (50%), Positives = 13/14 (92%)
Frame = -2 / +1
Query: 663 DFIGLNHYTAIYAR 622
DF+G+N+YT+ +A+
Sbjct: 100 DFVGINYYTSRFAK 141
>gb|CN821349.1|CN821349 HRO4424_C10_F20ZS5 Lib AA069E1X Avena sativa cv. Ogle-C etiolated
leaf Avena sativa cDNA clone HRO4424_C10_F20, mRNA
sequence
Length = 628
Score = 103 bits (219), Expect = 5e-023
Identities = 41/113 (36%), Positives = 64/113 (56%)
Frame = -2 / +2
Query: 546 DGVKIGGDTALAGFFDVPEAIELAIQYVNGRYKGTPVYITENGYXQWSDASREELIDDVR 367
+G IG + P + + Y+ +Y V+ITENG Q + + ++ + D
Sbjct: 77 NGKPIGPKANSDWLYIAPFGMYGCVNYIKQKYGNPAVFITENGMDQPGNLTLDQYLRDTT 256
Query: 366 RKNYLQGYITYLSKALRNGANVRGYFVWTLLDNFEWAFGYRLKYGLYHVDFDT 208
R + + Y+ L K + NGANV GYF W+LLDNFEW+ GY K+G+ +VDF++
Sbjct: 257 RVRFYRSYLNELKKGIDNGANVVGYFAWSLLDNFEWSSGYTSKFGIVYVDFNS 415
>gb|AF082991.1|AF082991 Avena sativa beta-D-glucosidase beta subunit precursor (P60b) mRNA,
complete cds
Length = 1923
Score = 77.1 bits (162), Expect(3) = 1e-022
Identities = 26/64 (40%), Positives = 44/64 (68%)
Frame = -2 / +1
Query: 408 WSDASREELIDDVRRKNYLQGYITYLSKALRNGANVRGYFVWTLLDNFEWAFGYRLKYGL 229
W + + +DD R YLQ ++T + +A+ GA+VRG+F W+L+DNFEW+ GY ++G+
Sbjct: 1393 WGNPPMTDPLDDPLRIEYLQQHMTAIKEAIDLGADVRGHFTWSLIDNFEWSMGYLSRFGI 1572
Query: 228 YHVD 217
++D
Sbjct: 1573 VYID 1584
Score = 35.9 bits (72), Expect(3) = 1e-022
Identities = 13/43 (30%), Positives = 23/43 (53%)
Frame = -2 / +1
Query: 546 DGVKIGGDTALAGFFDVPEAIELAIQYVNGRYKGTPVYITENG 418
+G+ IG D + P+ ++ + + +Y P+YITENG
Sbjct: 1246 NGIPIGPDLGMYWILSYPKGLKDILLLMKEKYGNPPIYITENG 1374
Score = 25.8 bits (50), Expect(3) = 1e-022
Identities = 9/20 (45%), Positives = 14/20 (70%)
Frame = -2 / +1
Query: 663 DFIGLNHYTAIYARDCLRSP 604
DF+G+N+YTA ++ SP
Sbjct: 1126 DFVGINYYTARFSEHIDISP 1185
>gb|CN819479.1|CN819479 HRO4406_E06_I12ZS5 Lib AA069E1X Avena sativa cv. Ogle-C etiolated
leaf Avena sativa cDNA clone HRO4406_E06_I12, mRNA
sequence
Length = 637
Score = 73.9 bits (155), Expect(3) = 2e-022
Identities = 25/55 (45%), Positives = 41/55 (74%)
Frame = -2 / +3
Query: 381 IDDVRRKNYLQGYITYLSKALRNGANVRGYFVWTLLDNFEWAFGYRLKYGLYHVD 217
+DD R YLQ ++T + +A+ GA+VRG+F W+L+DNFEW+ GY ++G+ ++D
Sbjct: 408 LDDPLRIEYLQQHMTAIKEAIDLGADVRGHFTWSLIDNFEWSLGYLSRFGIVYID 572
Score = 37.3 bits (75), Expect(3) = 2e-022
Identities = 13/43 (30%), Positives = 24/43 (55%)
Frame = -2 / +2
Query: 546 DGVKIGGDTALAGFFDVPEAIELAIQYVNGRYKGTPVYITENG 418
+G+ IG D + + P+ ++ + + +Y P+YITENG
Sbjct: 233 NGIPIGPDVGMYFIYSYPKGLKNILLRMKEKYGNPPIYITENG 361
Score = 26.7 bits (52), Expect(3) = 2e-022
Identities = 9/20 (45%), Positives = 15/20 (75%)
Frame = -2 / +2
Query: 663 DFIGLNHYTAIYARDCLRSP 604
DF+G+N+YT+ +A+ SP
Sbjct: 113 DFVGINYYTSRFAKHIDISP 172
>gb|CN821286.1|CN821286 HRO4423_F02_L03ZS5 Lib AA069E1X Avena sativa cv. Ogle-C etiolated
leaf Avena sativa cDNA clone HRO4423_F02_L03, mRNA
sequence
Length = 770
Score = 76.7 bits (161), Expect(3) = 3e-022
Identities = 26/64 (40%), Positives = 44/64 (68%)
Frame = -2 / +1
Query: 408 WSDASREELIDDVRRKNYLQGYITYLSKALRNGANVRGYFVWTLLDNFEWAFGYRLKYGL 229
W + + +DD R YLQ ++T + +A+ GA+VRG+F W+L+DNFEW+ GY ++G+
Sbjct: 289 WGNPPMTDPLDDPIRIEYLQQHMTAIKEAIDLGADVRGHFTWSLIDNFEWSLGYLSRFGI 468
Query: 228 YHVD 217
++D
Sbjct: 469 VYID 480
Score = 34.1 bits (68), Expect(3) = 3e-022
Identities = 13/43 (30%), Positives = 23/43 (53%)
Frame = -2 / +1
Query: 546 DGVKIGGDTALAGFFDVPEAIELAIQYVNGRYKGTPVYITENG 418
+G IG D + + P+ ++ + + +Y P+YITENG
Sbjct: 142 NGNLIGPDVGMYYVYSYPKGLKNILLLMKEKYGNPPIYITENG 270
Score = 26.7 bits (52), Expect(3) = 3e-022
Identities = 9/20 (45%), Positives = 15/20 (75%)
Frame = -2 / +1
Query: 663 DFIGLNHYTAIYARDCLRSP 604
DF+G+N+YT+ +A+ SP
Sbjct: 22 DFVGMNYYTSRFAKHIDISP 81
>gb|CN818092.1|CN818092 HRO4456_E12_I24ZS5 Lib AA070E1X Avena sativa cv. Ogle-C green leaf
Avena sativa cDNA clone HRO4456_E12_I24, mRNA sequence
Length = 488
Score = 85.8 bits (181), Expect(2) = 3e-021
Identities = 34/67 (50%), Positives = 46/67 (68%)
Frame = -2 / +3
Query: 405 SDASREELIDDVRRKNYLQGYITYLSKALRNGANVRGYFVWTLLDNFEWAFGYRLKYGLY 226
S ++ + +DD R YL+ Y+ KALRNGANV+GYFVW LD FE+ GY+ +YGL+
Sbjct: 12 SGSTSNDTLDDTDRVEYLKTYMGSTLKALRNGANVKGYFVWAFLDVFEFFGGYQSRYGLH 191
Query: 225 HVDFDTQ 205
VDFD +
Sbjct: 192 RVDFDDE 212
Score = 30.4 bits (60), Expect(2) = 3e-021
Identities = 11/20 (55%), Positives = 13/20 (65%)
Frame = -2 / +3
Query: 219 DFDTQERTXRMSARWYQGFL 160
D + R R+SARWY GFL
Sbjct: 204 DDEALPRQARLSARWYSGFL 263
Database: Avena_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:15 PM
Number of letters in database: 4,702,463
Number of sequences in database: 8143
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 7,750,907
Number of Sequences: 8143
Number of extensions: 92034
Number of successful extensions: 1096
Number of sequences better than 1.0e-020: 22
length of database: 1,567,487
effective HSP length: 43
effective length of database: 1,217,338
effective search space used: 272683712
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)