TBLASTX 2.2.10 [Oct-19-2004]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 44956.2.1
         (1252 letters)

Database: Avena_nucl_with_EST.fasta 
           8143 sequences; 4,702,463 total letters



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|CN819631.1|CN819631  HRO4402_D07_G14ZS5 Lib AA069E1X Aven...   251   2e-067

>gb|CN819631.1|CN819631 HRO4402_D07_G14ZS5 Lib AA069E1X Avena sativa cv. Ogle-C etiolated
           leaf Avena sativa cDNA clone HRO4402_D07_G14, mRNA
           sequence
          Length = 541

 Score =  251 bits (542), Expect = 2e-067
 Identities = 108/115 (93%), Positives = 112/115 (97%)
 Frame = -3 / +1

                                                                       
Query: 548 KGKIINIASVVGLTGNVGQANYSAAKAGVIGFTKTVAREYASRNINVNAIAPGFIASDMT 369
           +GK INIASVVGLTGN GQANYSAAKAGVIGFTKTVAREYASRNINVNAIAPGFIASDMT
Sbjct: 10  EGKSINIASVVGLTGNAGQANYSAAKAGVIGFTKTVAREYASRNINVNAIAPGFIASDMT 189

                                                                  
Query: 368 AELGEELEKKILSTIPLGRYGQPEEVAGLVEFLALNPAASYMTGQVLTIDGGMVM 204
           AELGEE+EKKILSTIPLGRYGQPEEVAGLVEFLALNPAA Y+TGQVLT+DGGMVM
Sbjct: 190 AELGEEIEKKILSTIPLGRYGQPEEVAGLVEFLALNPAAGYITGQVLTVDGGMVM 354




 Score =  177 bits (381), Expect = 3e-045
 Identities = 72/119 (60%), Positives = 85/119 (71%)
 Frame = +3 / -2

                                                                       
Query: 192 TQILHYHPSVNCKHLSSHIASCGVKGQELDQPCNFLWLAISP*RNG*QDFLLKLFSKFGS 371
           ++ LHYHP++N KHLS  +A   ++GQEL+QP NFLWLAISP  N  QDFLL L SKF  
Sbjct: 366 SRTLHYHPTINGKHLSGDVAGSRIQGQELNQPSNFLWLAISPQGNSRQDFLLDLLSKFSG 187

                                                                      
Query: 372 HIRCNEPWCNSIHIDISACILPGNCFCETNHSSLGCAIISLANIASKTNYRCNVDNFSL 548
           H+ C+E  C+ IHIDI ACI P NCFCE N  SLG  +ISLA+IASKTN  C VD   L
Sbjct: 186 HV*CDESRCDCIHIDIPACIFPSNCFCEANDPSLGSTVISLASIASKTNN*CYVDTLPL 10




 Score =  175 bits (377), Expect = 1e-044
 Identities = 71/117 (60%), Positives = 82/117 (70%)
 Frame = -2 / +3

                                                                       
Query: 549 KGKNYQHCICSWSYWQCWPS*L*RSQGWSDWFHKNSCQGVCKQKYQCECYCTRVHCI*YD 370
           +G+ YQH I  WSYWQCWPS*L   QGW  W HKNSC G+CKQ+YQCEC  T +H I +D
Sbjct: 9   RGEEYQHSISCWSYWQCWPS*LQCCQGWGHWLHKNSC*GICKQEYQCECNRTWIHRIRHD 188

                                                                    
Query: 369 CRTWRRA*EENLVNHSVREIWPTRGSCRVGRVPGP*PRS*LYDWTGAYN*RRDGNVR 199
             TWR   EENLV++S+ EIWP RGSC VG VPGP     L+  TGAY *  DGNV+
Sbjct: 189 R*TWRGDREENLVDYSLGEIWPARGSCWVG*VPGPESCCRLHHRTGAYR*WWDGNVK 359




 Score =  166 bits (358), Expect = 5e-042
 Identities = 71/85 (83%), Positives = 74/85 (87%)
 Frame = +1 / -3

                                                                       
Query: 202 YITIPPSIVSTCPVI*LAAGLRARNSTNPATSSGWPYLPNGMVDKIFFXXXXXXXAVISD 381
           YITIPPS VSTCPV+* AAG RARNSTNPATSSGWPYLP G+VDKIFF       AV+SD
Sbjct: 356 YITIPPSTVSTCPVM*PAAGFRARNSTNPATSSGWPYLPKGIVDKIFFSISSPSSAVMSD 177

                                    
Query: 382 AMNPGAIAFTLIFLLAYSLATVFVK 456
           AMNPGAIAFTLIFLLAYSLATVFVK
Sbjct: 176 AMNPGAIAFTLIFLLAYSLATVFVK 102




 Score =  136 bits (292), Expect = 6e-033
 Identities = 68/112 (60%), Positives = 79/112 (70%)
 Frame = +2 / -1

                                                                       
Query: 197 NLTLPSLRQL*APVQSYS*LRG*GPGTRPTLQLPLVGHISLTEWLTRFSSQALLQVRQSY 376
           + TLPS  Q *APV+  S  +  GPGT+PT QLPL GHIS  E  TRFSS++ LQV++S 
Sbjct: 361 DFTLPSHHQR*APVR*CSRQQDSGPGTQPTQQLPLAGHISPRE*STRFSSRSPLQVQRSC 182

                                                               
Query: 377 QMQ*TLVQ*HSH*YFCLHTPWQLFL*NQSLQPWLRYN*LGQHCQ*DQLQMQC 532
            M+*  V+ HSH*Y CLH P QLFL*+Q  QPW   N*LGQHCQ*DQ  M C
Sbjct: 181 LMR*IQVRLHSH*YSCLHIP*QLFL*SQ*PQPWQHCN*LGQHCQ*DQQLMLC 26




 Score = 92.7 bits (196), Expect(2) = 7e-023
 Identities = 46/74 (62%), Positives = 50/74 (67%)
 Frame = -1 / +2

                                                                       
Query: 487 IIAQPRLE*LVSQKQLPGSMQAEISM*MLLHQGSLHLI*LPNLEKSLRRKSCQPFR*GDM 308
           I   PRL  L SQKQL G+MQA ISM*M  H  S H  *  NLE+  RRKSC+ F  GDM
Sbjct: 71  ITVLPRLGSLASQKQLLGNMQAGISM*MQSHLDSSHQT*PLNLERRSRRKSCRLFPWGDM 250

                         
Query: 307 ANQRKLQGWSSSWP 266
           A+QRKL GW SSWP
Sbjct: 251 ASQRKLLGWLSSWP 292




 Score = 29.9 bits (59), Expect(2) = 7e-023
 Identities = 10/14 (71%), Positives = 11/14 (78%)
 Frame = -1 / +2

                         
Query: 238 DRCLQLTEGW*CKI 197
           DRCL L  GW*CK+
Sbjct: 320 DRCLPLMVGW*CKV 361



  Database: Avena_nucl_with_EST.fasta
    Posted date:  Feb 7, 2006  2:15 PM
  Number of letters in database: 4,702,463
  Number of sequences in database:  8143
  
Lambda     K      H
   0.318    0.134    0.401 


Matrix: BLOSUM62
Number of Hits to DB: 13,657,233
Number of Sequences: 8143
Number of extensions: 215833
Number of successful extensions: 1213
Number of sequences better than 1.0e-020: 1
length of database: 1,567,487
effective HSP length: 44
effective length of database: 1,209,195
effective search space used: 449820540
frameshift window, decay const: 40,  0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)