TBLASTX 2.2.10 [Oct-19-2004]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 3191506.2.1
         (1208 letters)

Database: Avena_nucl_with_EST.fasta 
           8143 sequences; 4,702,463 total letters



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|CN821264.1|CN821264  HRO4423_D02_H03ZS5 Lib AA069E1X Aven...   102   1e-022

>gb|CN821264.1|CN821264 HRO4423_D02_H03ZS5 Lib AA069E1X Avena sativa cv. Ogle-C etiolated
            leaf Avena sativa cDNA clone HRO4423_D02_H03, mRNA
            sequence
          Length = 733

 Score =  102 bits (217), Expect = 1e-022
 Identities = 40/45 (88%), Positives = 43/45 (95%)
 Frame = +3 / +1

                                                         
Query: 1023 KLNKILFLDDDIVVQRDLTGLWEVDLNGNVNGAVETCGESFHRFD 1157
            KL+KILFLDDDIVVQ+DLTGLW+VDL G VNGAVETCGESFHRFD
Sbjct: 13   KLDKILFLDDDIVVQKDLTGLWDVDLKGKVNGAVETCGESFHRFD 147



  Database: Avena_nucl_with_EST.fasta
    Posted date:  Feb 7, 2006  2:15 PM
  Number of letters in database: 4,702,463
  Number of sequences in database:  8143
  
Lambda     K      H
   0.318    0.134    0.401 


Matrix: BLOSUM62
Number of Hits to DB: 13,420,123
Number of Sequences: 8143
Number of extensions: 188272
Number of successful extensions: 806
Number of sequences better than 1.0e-020: 1
length of database: 1,567,487
effective HSP length: 44
effective length of database: 1,209,195
effective search space used: 432891810
frameshift window, decay const: 40,  0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)