TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 3023825.2.1
(1094 letters)
Database: Avena_nucl_with_EST.fasta
8143 sequences; 4,702,463 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CN818391.1|CN818391 HRO4469_D07_H13ZS5 Lib AA070E1X Aven... 222 7e-066
gb|CN815879.1|CN815879 HRO4511_E04_J07ZS5 Lib AA071E1X Aven... 166 5e-054
gb|CN820836.1|CN820836 HRO4420_D09_H18ZS5 Lib AA069E1X Aven... 166 5e-054
gb|CN817171.1|CN817171 HRO4459_H06_O11ZS5 Lib AA070E1X Aven... 146 3e-052
gb|CN814754.1|CN814754 HRO4502_B05_C10ZS5 Lib AA071E1X Aven... 146 3e-052
gb|CN820626.1|CN820626 HRO4415_E12_J23ZS5 Lib AA069E1X Aven... 146 2e-049
gb|CN815713.1|CN815713 HRO4514_F11_K22ZS5 Lib AA071E1X Aven... 146 2e-047
gb|CN817141.1|CN817141 HRO4528_F11_L22ZS5 Lib AA071E1X Aven... 89 1e-037
gb|CN815590.1|CN815590 HRO4513_D03_G05ZS5 Lib AA071E1X Aven... 146 5e-036
gb|CN817491.1|CN817491 HRO4466_C08_F16ZS5 Lib AA070E1X Aven... 110 4e-025
>gb|CN818391.1|CN818391 HRO4469_D07_H13ZS5 Lib AA070E1X Avena sativa cv. Ogle-C green leaf
Avena sativa cDNA clone HRO4469_D07_H13, mRNA sequence
Length = 735
Score = 222 bits (480), Expect(2) = 5e-063
Identities = 93/134 (69%), Positives = 102/134 (76%)
Frame = -3 / -1
Query: 477 FQPPYLHPKFPQQPFLHTQGHHKSECCRKLNQLLPAKLQFQYTSKASAHKDLDHPQTLDY 298
FQPPYLHP F QQ FLHT GHHK ECC+KLNQLLPAKL+FQYTSK S +LDHPQTLDY
Sbjct: 405 FQPPYLHPMFLQQLFLHTPGHHK*ECCQKLNQLLPAKLRFQYTSKVSVRINLDHPQTLDY 226
Query: 297 RSMGSSIYPCS*DF*FSCVSKVPCMLDLIPFWASIFHPHLHPMCQAFCPSDQESVLG*NH 118
+SMGSSIYPCS* *FSC S CML+ + F S H H PMCQAFCP QES+ *NH
Sbjct: 225 QSMGSSIYPCS*GS*FSCASMFLCMLNSVSF*VSKCHHHRRPMCQAFCPLGQESLSE*NH 46
Query: 117 SPLA*LHQDLQYIL 76
SPL LHQD Q ++
Sbjct: 45 SPLVLLHQDPQCLV 4
Score = 222 bits (480), Expect(4) = 7e-066
Identities = 82/92 (89%), Positives = 86/92 (93%)
Frame = +3 / +3
Query: 189 GIWKPRMVSNPAYKGPWKRKRIKNPNYKGKWKTPWIDNPEFEDDPDLYVLKPLKYIGIEV 368
GIWKPR + N AYKG WKRK+IKNPNYKGKWKTPWIDNPEFEDDPDLYVLKPLKYIGIEV
Sbjct: 117 GIWKPRRIPNSAYKGTWKRKKIKNPNYKGKWKTPWIDNPEFEDDPDLYVLKPLKYIGIEV 296
Query: 369 WQVKAGSVFDNILICDDPEYARKVVEETWGAN 464
WQVKAGSVFDNILICDDPEYA++ EETWGAN
Sbjct: 297 WQVKAGSVFDNILICDDPEYAKRAAEETWGAN 392
Score = 194 bits (419), Expect = 2e-050
Identities = 90/127 (70%), Positives = 106/127 (83%)
Frame = +1 / +1
Query: 85 LKILMKLSQRAMILSQNRFLIRRTKSLTHGMKMRMEYGSPEWYQIQHTRDLGNARELKIL 264
L+ILMK +QRAMIL + RFL +RTKSLTHG M M +G+ E Y+IQHT++ G+AR+L+ L
Sbjct: 13 LRILMK*NQRAMILFRERFLTQRTKSLTHGTTMMMAFGNLEGYRIQHTKEHGSARKLRTL 192
Query: 265 TTRVNGRPHGSIIQSLRMIQIFMC*SL*SILELKFGR*KLVQFSTTF*FVMTLSMQERLL 444
TTRVNGRPHG IIQSLRMIQI+ *+L*SILE KFGR*KLVQF TTF FVMT SMQ+ LL
Sbjct: 193 TTRVNGRPHGLIIQSLRMIQIYTY*NL*SILESKFGR*KLVQFLTTFSFVMTRSMQKELL 372
Query: 445 RKLGVQI 465
+K GVQI
Sbjct: 373 KKHGVQI 393
Score = 151 bits (325), Expect = 2e-037
Identities = 78/113 (69%), Positives = 87/113 (76%)
Frame = +2 / +2
Query: 83 Y*RS**S*ARGL*FYPKTDS*SEGQKA*HMG*R*GWNMEAQNGIKSSIQGTLETQEN*KS 262
+* S**S RGL*FY + DS* +GQKA*HMG R* W++E + SIQ +E QEN*+
Sbjct: 11 H*GS**SKTRGL*FYSERDS*PKGQKA*HMGRR**WHLET*KDTEFSIQRNMEAQEN*EP 190
Query: 263 *LQG*MEDPMDR*SRV*G*SRSLCAEAFEVYWN*SLAGKSWFSFRQHSDL**P 421
*LQG*MEDPMD *SRV*G*SR + E FEVYWN SLAGKSWFSF QHS L**P
Sbjct: 191 *LQG*MEDPMD**SRV*G*SRFIRTETFEVYWNRSLAGKSWFSF*QHSHL**P 349
Score = 108 bits (230), Expect(2) = 3e-043
Identities = 46/71 (64%), Positives = 53/71 (74%)
Frame = -1 / -2
Query: 296 DPWGLPFTLVVRIFNSLAFPRSLVCWI*YHSGLPYSILIFIPCVRLFVLRIRNLFWDRII 117
+PWGLPFTLVVR+ N LA P S VC I Y S P +I+I +PCVRLFVL +RNL +RII
Sbjct: 224 NPWGLPFTLVVRVLNFLALPCSFVC*IRYPSRFPNAIIIVVPCVRLFVLWVRNLSRNRII 45
Query: 116 ALWLNFIRIFN 84
ALW FIRI N
Sbjct: 44 ALWFYFIRILN 12
Score = 82.6 bits (174), Expect(2) = 3e-043
Identities = 33/44 (75%), Positives = 39/44 (88%)
Frame = -1 / -2
Query: 464 ICTPSFLNNLSCILRVITNQNVVEN*TSFYLPNFNSNILQRLQH 333
ICTP F ++ CILRVITN+NVV+N*TSFYLPNF+SNILQR Q+
Sbjct: 392 ICTPCFFSSSFCILRVITNENVVKN*TSFYLPNFDSNILQRFQY 261
Score = 37.3 bits (75), Expect(2) = 5e-063
Identities = 18/38 (47%), Positives = 19/38 (50%)
Frame = -3 / -1
Query: 696 KAPTMSEATSSLCF*GMQYLGTFIAHHGSRPSDLCSVF 583
K +S S F GM F AHHGS PSD C VF
Sbjct: 660 KYNVISMLNPSSSFEGMSIRRPFKAHHGSHPSDPCCVF 547
Score = 33.6 bits (67), Expect(4) = 7e-066
Identities = 12/12 (100%), Positives = 12/12 (100%)
Frame = +3 / +3
Query: 84 IEDPDEVKPEGY 119
IEDPDEVKPEGY
Sbjct: 12 IEDPDEVKPEGY 47
Score = 29.5 bits (58), Expect(4) = 7e-066
Identities = 17/34 (50%), Positives = 20/34 (58%)
Frame = +2 / +2
Query: 584 KTLQRSLGRLP**AIKVPKYCIPQKHKLEVASDI 685
KT Q SLG LP**A+K + IP +L DI
Sbjct: 548 KTQQGSLG*LP**ALKGLRMLIPSNEELGFNIDI 649
Score = 23.1 bits (44), Expect(4) = 7e-066
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = +3 / +1
Query: 690 VLFNNNN*FAWSEQPEVFLAMC 755
V+ N * E+PEVFL +C
Sbjct: 652 VVLVTNK*STKQERPEVFLDIC 717
>gb|CN815879.1|CN815879 HRO4511_E04_J07ZS5 Lib AA071E1X Avena sativa cv. Ogle-C root Avena
sativa cDNA clone HRO4511_E04_J07, mRNA sequence
Length = 779
Score = 166 bits (356), Expect(2) = 5e-054
Identities = 59/90 (65%), Positives = 72/90 (80%)
Frame = +3 / +2
Query: 189 GIWKPRMVSNPAYKGPWKRKRIKNPNYKGKWKTPWIDNPEFEDDPDLYVLKPLKYIGIEV 368
G W + NP YKGPW +K+IKNPN+KGKWK P IDNPE++DDP +Y LK+IGIE+
Sbjct: 173 GEWTAPTIPNPEYKGPWTQKKIKNPNFKGKWKAPLIDNPEYKDDPYIYAFDSLKHIGIEL 352
Query: 369 WQVKAGSVFDNILICDDPEYARKVVEETWG 458
WQVK+G++FDNILI DDPEYA+K EETWG
Sbjct: 353 WQVKSGTLFDNILITDDPEYAKKFAEETWG 442
Score = 97.3 bits (206), Expect = 4e-021
Identities = 52/146 (35%), Positives = 76/146 (52%)
Frame = -1 / -2
Query: 455 PSFLNNLSCILRVITNQNVVEN*TSFYLPNFNSNILQRLQHXXXXXXXXXXXIDPWGLPF 276
P L L +LRVI +Q+VVE + F LP N+++LQ ++ +D LP
Sbjct: 439 PGLLCKLLGVLRVIRDQDVVEQSSRFNLPQLNADVLQAVKSVDVRIILVLWVVDQRRLPL 260
Query: 275 TLVVRIFNSLAFPRSLVCWI*YHSGLPYSILIFIPCVRLFVLRIRNLFWDRIIALWLNFI 96
L VR+ + L P LV + P+++ + IP +RL +RI L + II LWL +
Sbjct: 259 ALEVRVLDFLLGPWPLVLRVWNGWSCPFTVFLLIPVLRLGCIRISKLLGNVIITLWLLVL 80
Query: 95 RIFNIFSVIPILRPFGVNILNFTRRE 18
RI N+F V P+ GV I + RRE
Sbjct: 79 RIRNVFIVFPVFWLLGVRIPHLLRRE 2
Score = 61.1 bits (127), Expect(2) = 5e-054
Identities = 20/34 (58%), Positives = 28/34 (82%)
Frame = +3 / +2
Query: 18 LPPRKIKDVHAKRPKDWDDREYIEDPDEVKPEGY 119
LP +K++D AK+P+DW+D EYI DP++ KPEGY
Sbjct: 2 LPAKKMRDPDAKKPEDWEDNEYIPDPEDKKPEGY 103
>gb|CN820836.1|CN820836 HRO4420_D09_H18ZS5 Lib AA069E1X Avena sativa cv. Ogle-C etiolated
leaf Avena sativa cDNA clone HRO4420_D09_H18, mRNA
sequence
Length = 602
Score = 166 bits (356), Expect(2) = 5e-054
Identities = 59/90 (65%), Positives = 72/90 (80%)
Frame = +3 / +3
Query: 189 GIWKPRMVSNPAYKGPWKRKRIKNPNYKGKWKTPWIDNPEFEDDPDLYVLKPLKYIGIEV 368
G W + NP YKGPW +K+IKNPN+KGKWK P IDNPE++DDP +Y LK+IGIE+
Sbjct: 180 GEWTAPTIPNPEYKGPWTQKKIKNPNFKGKWKAPLIDNPEYKDDPYIYAFDSLKHIGIEL 359
Query: 369 WQVKAGSVFDNILICDDPEYARKVVEETWG 458
WQVK+G++FDNILI DDPEYA+K EETWG
Sbjct: 360 WQVKSGTLFDNILITDDPEYAKKFAEETWG 449
Score = 100 bits (213), Expect = 4e-022
Identities = 53/149 (35%), Positives = 77/149 (51%)
Frame = -1 / -1
Query: 458 TPSFLNNLSCILRVITNQNVVEN*TSFYLPNFNSNILQRLQHXXXXXXXXXXXIDPWGLP 279
+P L L ILRVI +Q+VVE + F LP ++++LQ ++ +D LP
Sbjct: 449 SPGLLCKLLGILRVIRDQDVVEQSSRFNLPQLDADVLQAVKSVDVRIILVLWVVDQRSLP 270
Query: 278 FTLVVRIFNSLAFPRSLVCWI*YHSGLPYSILIFIPCVRLFVLRIRNLFWDRIIALWLNF 99
L VR+ + L P SLV + P++I + IP RL +RI D I+ LWL
Sbjct: 269 LALEVRVLDFLLCPWSLVLGVWNGWSCPFTIFLLIPVFRLRCIRISKFLGDVIVTLWLLV 90
Query: 98 IRIFNIFSVIPILRPFGVNILNFTRRENI 12
+RI N+F V P+L G+ I R EN+
Sbjct: 89 LRIRNVFVVFPVLWLLGIRISILLRGENV 3
Score = 99.1 bits (210), Expect = 1e-021
Identities = 60/152 (39%), Positives = 70/152 (46%)
Frame = -3 / -3
Query: 465 YLHPKFPQQPFLHTQGHHKSECCRKLNQLLPAKLQFQYTSKASAHKDLDHPQTLDYRSMG 286
Y P+ P Q HTQGH S CCR Q+ PA + + S + DHP TL RS
Sbjct: 456 YAFPRSPLQTSWHTQGHP*SGCCRTEFQI*PATTRCRCASSCQKRRCKDHPCTLGCRSKE 277
Query: 285 SSIYPCS*DF*FSCVSKVPCMLDLIPFWASIFHPHLHPMCQAFCPSDQESVLG*NHSPLA 106
S P S *FS VS VPC L SI H HP QA DQ G + +PLA
Sbjct: 276 PSTCP*SSGS*FSFVSMVPCTRGLEWLELSIHHLPPHPSLQASLHQDQ*VPWGCHRNPLA 97
Query: 105 *LHQDLQYILCHPNP*AFWREHP*FYEEGEYP 10
QD + I C P+P A W + GE P
Sbjct: 96 SCPQDQECIRCLPSPLASWHQDLNSSSRGECP 1
Score = 61.1 bits (127), Expect(2) = 5e-054
Identities = 22/36 (61%), Positives = 28/36 (77%)
Frame = +3 / +3
Query: 12 DILPPRKIKDVHAKRPKDWDDREYIEDPDEVKPEGY 119
DILP +K D AK+P+DW+D EYI DP++ KPEGY
Sbjct: 3 DILPAKKN*DPDAKKPEDWEDNEYIPDPEDKKPEGY 110
>gb|CN817171.1|CN817171 HRO4459_H06_O11ZS5 Lib AA070E1X Avena sativa cv. Ogle-C green leaf
Avena sativa cDNA clone HRO4459_H06_O11, mRNA sequence
Length = 856
Score = 146 bits (314), Expect(2) = 3e-052
Identities = 53/89 (59%), Positives = 66/89 (74%)
Frame = +3 / +2
Query: 189 GIWKPRMVSNPAYKGPWKRKRIKNPNYKGKWKTPWIDNPEFEDDPDLYVLKPLKYIGIEV 368
G W + NP YKGPWK+K++KNPNY+GKWK I NP+F+DDP +Y LKYIGIE+
Sbjct: 311 GEWTAPTIPNPEYKGPWKQKKMKNPNYQGKWKAHMIANPDFKDDPYIYAFDSLKYIGIEL 490
Query: 369 WQVKAGSVFDNILICDDPEYARKVVEETW 455
WQVK+G++FDNILI DD A+ EETW
Sbjct: 491 WQVKSGTLFDNILITDDAPLAKAFAEETW 577
Score = 98.2 bits (208), Expect(2) = 2e-029
Identities = 41/92 (44%), Positives = 59/92 (64%)
Frame = -1 / -1
Query: 284 LPFTLVVRIFNSLAFPRSLVCWI*YHSGLPYSILIFIPCVRLFVLRIRNLFWDRIIALWL 105
LPFTL+VR+ + L P SLV W+ G P++I + IP +RL +R+ N + IIALWL
Sbjct: 406 LPFTLIVRVLHFLLLPWSLVLWVGNGWGSPFTIFLIIPVLRLLSIRVSNFLGNIIIALWL 227
Query: 104 NFIRIFNIFSVIPILRPFGVNILNFTRRENIP 9
+R+ N+ VIP+LR +L+F R+NIP
Sbjct: 226 RVLRVRNVLLVIPVLRLLSFWVLDFLGRKNIP 131
Score = 74.4 bits (156), Expect(2) = 3e-052
Identities = 25/36 (69%), Positives = 32/36 (88%)
Frame = +3 / +2
Query: 12 DILPPRKIKDVHAKRPKDWDDREYIEDPDEVKPEGY 119
DILPP++IKD AK+P+DWDD+EYI DP++ KPEGY
Sbjct: 134 DILPPKEIKDPEAKKPEDWDDKEYIPDPEDTKPEGY 241
Score = 46.0 bits (94), Expect(2) = 2e-029
Identities = 20/37 (54%), Positives = 24/37 (64%)
Frame = -2 / -2
Query: 454 QVSSTTFLAYSGSSQIRMLSKTEPAFTCQTSIPIYFK 344
QVSS LA SS +RMLS P TC +SIP+YF+
Sbjct: 576 QVSSANALAKGASSVMRMLSNKVPDLTCHSSIPMYFR 466
>gb|CN814754.1|CN814754 HRO4502_B05_C10ZS5 Lib AA071E1X Avena sativa cv. Ogle-C root Avena
sativa cDNA clone HRO4502_B05_C10, mRNA sequence
Length = 838
Score = 146 bits (314), Expect(2) = 3e-052
Identities = 53/89 (59%), Positives = 66/89 (74%)
Frame = +3 / +2
Query: 189 GIWKPRMVSNPAYKGPWKRKRIKNPNYKGKWKTPWIDNPEFEDDPDLYVLKPLKYIGIEV 368
G W + NP YKGPWK+K++KNPNY+GKWK I NP+F+DDP +Y LKYIGIE+
Sbjct: 233 GEWTAPTIPNPEYKGPWKQKKMKNPNYQGKWKAHMIANPDFKDDPYIYAFDSLKYIGIEL 412
Query: 369 WQVKAGSVFDNILICDDPEYARKVVEETW 455
WQVK+G++FDNILI DD A+ EETW
Sbjct: 413 WQVKSGTLFDNILITDDAALAKAFAEETW 499
Score = 98.2 bits (208), Expect(2) = 2e-029
Identities = 41/92 (44%), Positives = 59/92 (64%)
Frame = -1 / -1
Query: 284 LPFTLVVRIFNSLAFPRSLVCWI*YHSGLPYSILIFIPCVRLFVLRIRNLFWDRIIALWL 105
LPFTL+VR+ + L P SLV W+ G P++I + IP +RL +R+ N + IIALWL
Sbjct: 328 LPFTLIVRVLHFLLLPWSLVLWVGNGWGSPFTIFLIIPVLRLLSIRVSNFLGNIIIALWL 149
Query: 104 NFIRIFNIFSVIPILRPFGVNILNFTRRENIP 9
+R+ N+ VIP+LR +L+F R+NIP
Sbjct: 148 RVLRVRNVLLVIPVLRLLSFWVLDFLGRKNIP 53
Score = 74.4 bits (156), Expect(2) = 3e-052
Identities = 25/36 (69%), Positives = 32/36 (88%)
Frame = +3 / +2
Query: 12 DILPPRKIKDVHAKRPKDWDDREYIEDPDEVKPEGY 119
DILPP++IKD AK+P+DWDD+EYI DP++ KPEGY
Sbjct: 56 DILPPKEIKDPEAKKPEDWDDKEYIPDPEDTKPEGY 163
Score = 46.4 bits (95), Expect(2) = 2e-029
Identities = 20/37 (54%), Positives = 25/37 (67%)
Frame = -2 / -2
Query: 454 QVSSTTFLAYSGSSQIRMLSKTEPAFTCQTSIPIYFK 344
QVSS LA + SS +RMLS P TC +SIP+YF+
Sbjct: 498 QVSSANALAKAASSVMRMLSNKVPDLTCHSSIPMYFR 388
>gb|CN820626.1|CN820626 HRO4415_E12_J23ZS5 Lib AA069E1X Avena sativa cv. Ogle-C etiolated
leaf Avena sativa cDNA clone HRO4415_E12_J23, mRNA
sequence
Length = 807
Score = 146 bits (314), Expect(2) = 2e-049
Identities = 53/89 (59%), Positives = 66/89 (74%)
Frame = +3 / -3
Query: 189 GIWKPRMVSNPAYKGPWKRKRIKNPNYKGKWKTPWIDNPEFEDDPDLYVLKPLKYIGIEV 368
G W + NP YKGPWK+K++KNPNY+GKWK I NP+F+DDP +Y LKYIGIE+
Sbjct: 640 GEWTAPTIPNPEYKGPWKQKKMKNPNYQGKWKAHMIANPDFKDDPYIYAFDSLKYIGIEL 461
Query: 369 WQVKAGSVFDNILICDDPEYARKVVEETW 455
WQVK+G++FDNILI DD A+ EETW
Sbjct: 460 WQVKSGTLFDNILITDDAALAKAFAEETW 374
Score = 90.9 bits (192), Expect(2) = 3e-027
Identities = 37/85 (43%), Positives = 54/85 (63%)
Frame = -1 / +2
Query: 284 LPFTLVVRIFNSLAFPRSLVCWI*YHSGLPYSILIFIPCVRLFVLRIRNLFWDRIIALWL 105
LPFTL+VR+ + L P SLV W+ G P++I + IP +RL +R+ N + IIALWL
Sbjct: 545 LPFTLIVRVLHFLLLPWSLVLWVGNGWGSPFTIFLIIPVLRLLSIRVSNFLGNIIIALWL 724
Query: 104 NFIRIFNIFSVIPILRPFGVNILNF 30
+R+ N+ VIP+LR +L+F
Sbjct: 725 RVLRVRNVLLVIPVLRLLSFRVLDF 799
Score = 64.8 bits (135), Expect(2) = 2e-049
Identities = 21/32 (65%), Positives = 28/32 (87%)
Frame = +3 / -3
Query: 24 PRKIKDVHAKRPKDWDDREYIEDPDEVKPEGY 119
P++IKD AK+P+DWDD+EYI DP++ KPEGY
Sbjct: 805 PKEIKDPEAKKPEDWDDKEYIPDPEDTKPEGY 710
Score = 46.4 bits (95), Expect(2) = 3e-027
Identities = 20/37 (54%), Positives = 25/37 (67%)
Frame = -2 / +3
Query: 454 QVSSTTFLAYSGSSQIRMLSKTEPAFTCQTSIPIYFK 344
QVSS LA + SS +RMLS P TC +SIP+YF+
Sbjct: 375 QVSSANALAKAASSVMRMLSNKVPDLTCHSSIPMYFR 485
>gb|CN815713.1|CN815713 HRO4514_F11_K22ZS5 Lib AA071E1X Avena sativa cv. Ogle-C root Avena
sativa cDNA clone HRO4514_F11_K22, mRNA sequence
Length = 753
Score = 146 bits (314), Expect(2) = 2e-047
Identities = 53/89 (59%), Positives = 66/89 (74%)
Frame = +3 / +3
Query: 189 GIWKPRMVSNPAYKGPWKRKRIKNPNYKGKWKTPWIDNPEFEDDPDLYVLKPLKYIGIEV 368
G W + NP YKGPWK+K++KNPNY+GKWK I NP+F+DDP +Y LKYIGIE+
Sbjct: 165 GEWTAPTIPNPEYKGPWKQKKMKNPNYQGKWKAHMIANPDFKDDPYIYAFDSLKYIGIEL 344
Query: 369 WQVKAGSVFDNILICDDPEYARKVVEETW 455
WQVK+G++FDNILI DD A+ EETW
Sbjct: 345 WQVKSGTLFDNILITDDAALAKAFAEETW 431
Score = 86.3 bits (182), Expect(2) = 6e-026
Identities = 35/76 (46%), Positives = 50/76 (65%)
Frame = -1 / -2
Query: 284 LPFTLVVRIFNSLAFPRSLVCWI*YHSGLPYSILIFIPCVRLFVLRIRNLFWDRIIALWL 105
LPFTL+VR+ + L P SLV W+ G P++I + IP +RL +R+ N + IIALWL
Sbjct: 260 LPFTLIVRVLHFLLLPWSLVLWVGNGWGSPFTIFLIIPVLRLLSIRVSNFLGNIIIALWL 81
Query: 104 NFIRIFNIFSVIPILR 57
+R+ N+ VIP+LR
Sbjct: 80 RVLRVRNVLLVIPVLR 33
Score = 58.3 bits (121), Expect(2) = 2e-047
Identities = 19/28 (67%), Positives = 24/28 (85%)
Frame = +3 / +3
Query: 36 KDVHAKRPKDWDDREYIEDPDEVKPEGY 119
KD AK+P+DWDD+EYI DP++ KPEGY
Sbjct: 12 KDPEAKKPEDWDDKEYIPDPEDTKPEGY 95
Score = 46.4 bits (95), Expect(2) = 6e-026
Identities = 20/37 (54%), Positives = 25/37 (67%)
Frame = -2 / -3
Query: 454 QVSSTTFLAYSGSSQIRMLSKTEPAFTCQTSIPIYFK 344
QVSS LA + SS +RMLS P TC +SIP+YF+
Sbjct: 430 QVSSANALAKAASSVMRMLSNKVPDLTCHSSIPMYFR 320
>gb|CN817141.1|CN817141 HRO4528_F11_L22ZS5 Lib AA071E1X Avena sativa cv. Ogle-C root Avena
sativa cDNA clone HRO4528_F11_L22, mRNA sequence
Length = 594
Score = 88.6 bits (187), Expect(3) = 1e-037
Identities = 33/71 (46%), Positives = 46/71 (64%)
Frame = +3 / +2
Query: 243 RKRIKNPNYKGKWKTPWIDNPEFEDDPDLYVLKPLKYIGIEVWQVKAGSVFDNILICDDP 422
+++ + P+Y GKWK I NP+ DDP +Y LK IGI++WQ K G++ DNILI DD
Sbjct: 347 KRKSRTPSYLGKWKASMIANPDLTDDPYIYAFYSLKCIGIQLWQDKPGTLIDNILIPDDA 526
Query: 423 EYARKVVEETW 455
A+ +ETW
Sbjct: 527 ALAKTFAKETW 559
Score = 72.1 bits (151), Expect(3) = 1e-037
Identities = 24/36 (66%), Positives = 31/36 (86%)
Frame = +3 / +1
Query: 12 DILPPRKIKDVHAKRPKDWDDREYIEDPDEVKPEGY 119
DILPP++IKD A +P+DWDD+EYI DP++ KPEGY
Sbjct: 115 DILPPKEIKDPEANKPEDWDDKEYIPDPEDTKPEGY 222
Score = 29.5 bits (58), Expect(3) = 1e-037
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = +3 / +1
Query: 189 GIWKPRMVSNPAYKGPWKRKRIKNP 263
G W + P +GP K+K+IKNP
Sbjct: 292 GEWTAPTIPKP*NEGPRKQKKIKNP 366
>gb|CN815590.1|CN815590 HRO4513_D03_G05ZS5 Lib AA071E1X Avena sativa cv. Ogle-C root Avena
sativa cDNA clone HRO4513_D03_G05, mRNA sequence
Length = 636
Score = 146 bits (314), Expect = 5e-036
Identities = 53/89 (59%), Positives = 66/89 (74%)
Frame = +3 / +3
Query: 189 GIWKPRMVSNPAYKGPWKRKRIKNPNYKGKWKTPWIDNPEFEDDPDLYVLKPLKYIGIEV 368
G W + NP YKGPWK+K++KNPNY+GKWK I NP+F+DDP +Y LKYIGIE+
Sbjct: 12 GEWTAPTIPNPEYKGPWKQKKMKNPNYQGKWKAHMIANPDFKDDPYIYAFDSLKYIGIEL 191
Query: 369 WQVKAGSVFDNILICDDPEYARKVVEETW 455
WQVK+G++FDNILI DD A+ EETW
Sbjct: 192 WQVKSGTLFDNILITDDAALAKAFAEETW 278
>gb|CN817491.1|CN817491 HRO4466_C08_F16ZS5 Lib AA070E1X Avena sativa cv. Ogle-C green leaf
Avena sativa cDNA clone HRO4466_C08_F16, mRNA sequence
Length = 598
Score = 110 bits (235), Expect = 4e-025
Identities = 41/70 (58%), Positives = 52/70 (74%)
Frame = +3 / +1
Query: 246 KRIKNPNYKGKWKTPWIDNPEFEDDPDLYVLKPLKYIGIEVWQVKAGSVFDNILICDDPE 425
+ +K PNY+GKWK I NP+F+DDP +Y LKYIGIE+WQVK+G++FDNILI DD
Sbjct: 10 EEMKYPNYQGKWKAHMIANPDFKDDPYIYAFDSLKYIGIELWQVKSGTLFDNILITDDAA 189
Query: 426 YARKVVEETW 455
A+ EETW
Sbjct: 190 LAKAFAEETW 219
Database: Avena_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:15 PM
Number of letters in database: 4,702,463
Number of sequences in database: 8143
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 11,210,908
Number of Sequences: 8143
Number of extensions: 157444
Number of successful extensions: 897
Number of sequences better than 1.0e-020: 11
length of database: 1,567,487
effective HSP length: 44
effective length of database: 1,209,195
effective search space used: 386942400
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)