TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2850725.2.1
(847 letters)
Database: Avena_nucl_with_EST.fasta
8143 sequences; 4,702,463 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CN815034.1|CN815034 HRO4505_B06_C11ZS5 Lib AA071E1X Aven... 265 5e-072
gb|CN816873.1|CN816873 HRO4525_G05_M09ZS5 Lib AA071E1X Aven... 232 2e-063
gb|CN816101.1|CN816101 HRO4517_A05_A09ZS5 Lib AA071E1X Aven... 231 2e-061
gb|CN821053.1|CN821053 HRO4427_A04_B07ZS5 Lib AA069E1X Aven... 228 8e-061
gb|CN815850.1|CN815850 HRO4511_B09_D17ZS5 Lib AA071E1X Aven... 217 2e-057
gb|CN814789.1|CN814789 HRO4502_E05_I10ZS5 Lib AA071E1X Aven... 195 8e-051
gb|CN816425.1|CN816425 HRO4520_F02_L04ZS5 Lib AA071E1X Aven... 166 4e-042
gb|CN814955.1|CN814955 HRO4504_C09_F18ZS5 Lib AA071E1X Aven... 135 5e-036
gb|CN820644.1|CN820644 HRO4415_G07_N13ZS5 Lib AA069E1X Aven... 102 3e-026
gb|CN816150.1|CN816150 HRO4517_E08_I15ZS5 Lib AA071E1X Aven... 108 1e-024
gb|CN814894.1|CN814894 HRO4503_F08_L15ZS5 Lib AA071E1X Aven... 105 1e-023
gb|CN814875.1|CN814875 HRO4503_D10_H19ZS5 Lib AA071E1X Aven... 99 1e-021
>gb|CN815034.1|CN815034 HRO4505_B06_C11ZS5 Lib AA071E1X Avena sativa cv. Ogle-C root Avena
sativa cDNA clone HRO4505_B06_C11, mRNA sequence
Length = 629
Score = 265 bits (574), Expect = 5e-072
Identities = 103/162 (63%), Positives = 130/162 (80%)
Frame = -1 / +1
Query: 841 CYHGDGTTGNSLAKAFPLIKITVLDLPQEIRKIPADGVVNYVGGDMFKSIPRAQMVLLKM 662
C GD TT ++ KA P IK TVLDLP+ I K+P+DG+VNYV GD+F S+P++Q VLLK+
Sbjct: 10 CGGGD*TTARAITKAHPHIKCTVLDLPKVIEKVPSDGIVNYVAGDLFHSVPKSQAVLLKL 189
Query: 661 VLHHWSDEDCVKILANCRKAIPSREEGGKVVIADIILDPASGPVMFQTQLLMDVCMMLMK 482
VLHHWSD+DCVKIL+ CR AIPSREEGGKV+I DI++ P+ GP+MF+ Q+LMD+ M++
Sbjct: 190 VLHHWSDDDCVKILSQCRSAIPSREEGGKVIIIDILVGPSLGPIMFEAQILMDMAMLVNT 369
Query: 481 GGRQRDVNDWRDLIQKAGFSDYKLLKKFGARGVLEIYP*GIS 356
GRQRD NDWR L KAGFSDYK++KK GARGV E+Y * +S
Sbjct: 370 RGRQRDENDWRQLFMKAGFSDYKVVKKLGARGVFEVYK*RVS 495
Score = 179 bits (386), Expect = 4e-046
Identities = 90/152 (59%), Positives = 101/152 (66%)
Frame = +3 / -1
Query: 378 SRTPRAPNFFSSL*SLKPAFWMRSRQSFTSRCRPPFISIMQTSIRS*V*NMTGPEAGSRI 557
S+TPRAPNF ++L*SL PAF RQSF+SR RP + M SIR * N+ GP G
Sbjct: 473 SKTPRAPNFLTTL*SLNPAFMKS*RQSFSSR*RPLVFTSMAMSIRI*ASNIIGPSEGPTR 294
Query: 558 ISAMTTFPPSSREGIAFLQLARIFTQSSSLQWCSTILSNTI*ARGMDLNMSPPT*LTTPS 737
IS M TFPPSSREG+A L +IFTQSSSLQWCST LSNT * G + N SP T*LT PS
Sbjct: 293 ISMMITFPPSSREGMALLH*DKIFTQSSSLQWCSTSLSNTA*DFGTEWNKSPAT*LTIPS 114
Query: 738 AGILRISCGRSSTVILISGKALAREFPVVPSP 833
G I+ GRSSTV L+ G AL VV SP
Sbjct: 113 DGTFSITFGRSSTVHLMCGWALVMALAVVQSP 18
Score = 169 bits (363), Expect = 7e-043
Identities = 77/147 (52%), Positives = 94/147 (63%)
Frame = +2 / -3
Query: 371 IDLQDTSSSKFLQQLVVTETCFLDEVTPVIHVPLPASFHQHHADVH*ELSLKHDWS*GWV 550
+D +DTS S FL +VTE CF +E+TPVI + L AS H VH LS KH WS*
Sbjct: 480 VDFEDTSCS*FLDNFIVTEPCFHEELTPVIFITLTASCVHKHGHVHQNLSFKHYWS*RRS 301
Query: 551 ENNICDDNLPSLFP*RYCLPAVGKDLHAVLITPVVQHHLK*HHLSTWDGFEHVTSNIVNN 730
NI DD+LPSL *R P + +DLH V+ITPVVQH L+ H L WDG E +TSNIV++
Sbjct: 300 NQNIYDDHLPSLLT*RNGTPTLRQDLHTVVITPVVQHKLEQHRLRLWDGVEQITSNIVDD 121
Query: 731 TISRYLANLLRKVQYCDLDQWEGLGEG 811
TI R N L K+Q+ LD GLG+G
Sbjct: 120 TIRRNFLNHLWKIQHSALDVRMGLGDG 40
Score = 108 bits (231), Expect = 1e-024
Identities = 63/139 (45%), Positives = 74/139 (53%)
Frame = -2 / +2
Query: 771 WTFRRRFARYRLMVLLTMLEVTCSNPSHVLKWCYLRWCCTTGVMRTA*RSLPTAGRQYLH 592
W F+R ++RLMV TML V CS PS L+ C CCTTGVM T *RS + G +LH
Sbjct: 80 WIFQR*LRKFRLMVSSTMLLVICSTPSQSLRRCCSSLCCTTGVMTTV*RSCLSVGVPFLH 259
Query: 591 GKREGRLSSQILFSTQPQDQSCFKLNS*WTSA*C**KEAXXXXXXXXXXXSRKQVSVTTS 412
+REGR SS I + DQ C KL *WT * +EA S KQ SVT
Sbjct: 260 VRREGR*SS*IFWLDLR*DQ*CLKLRF*WTWPCL*TQEAVNVMKMTGVSSS*KQGSVTIK 439
Query: 411 C*RNLELEVSWRSIPKASP 355
RN E EVS +S + P
Sbjct: 440 LSRN*EHEVSSKSTSEGFP 496
Score = 105 bits (223), Expect = 1e-023
Identities = 66/169 (39%), Positives = 87/169 (51%)
Frame = -3 / +3
Query: 833 WGWHNREFPRQGLPTDQDHSTGPSAGDSQDTG*WCC*LCWR*HVQIHPTCSNGVT*DGAA 654
W ++ E QG Q H G S GD + + *W LC * V + P S GV AA
Sbjct: 18 WRLNDGEGHHQGPSAHQVHCAGSSKGD*ESSV*WYRQLCCW*FVPLRPKVSGGVAQACAA 197
Query: 653 PLE**GLREDPCQLQEGNTFTGRGREGCHRRYYSRPSLRTSHVSNSTPNGRLHDADERRP 474
PLE** L ED + E ++FT GREG H RY RT++V +S +G H + +RP
Sbjct: 198 PLE**RLCEDLVSV*ECHSFT*GGREGDHHRYSGWTFARTNNV*SSDSDGHGHACEHKRP 377
Query: 473 AAGRE*LA*PHPESRFQ*LQAAEEIWSSRCPGDLSLRHLLHRSAPTLYC 327
+ +*LA ESR Q*L + +EI S+RC L ++ L P C
Sbjct: 378 ST**K*LASALHESRVQ*L*SCQEIRSTRCLRSLQVKGFLRNVYPPRAC 524
>gb|CN816873.1|CN816873 HRO4525_G05_M09ZS5 Lib AA071E1X Avena sativa cv. Ogle-C root Avena
sativa cDNA clone HRO4525_G05_M09, mRNA sequence
Length = 662
Score = 232 bits (500), Expect(2) = 2e-063
Identities = 87/133 (65%), Positives = 111/133 (83%)
Frame = -1 / +2
Query: 754 IRKIPADGVVNYVGGDMFKSIPRAQMVLLKMVLHHWSDEDCVKILANCRKAIPSREEGGK 575
I K+P+DG+VNYV GD+F S+P++Q VLLK+VLHHWSD+DCVKIL+ CR AIPSREEGGK
Sbjct: 44 IEKVPSDGIVNYVAGDLFHSVPKSQAVLLKLVLHHWSDDDCVKILSQCRSAIPSREEGGK 223
Query: 574 VVIADIILDPASGPVMFQTQLLMDVCMMLMKGGRQRDVNDWRDLIQKAGFSDYKLLKKFG 395
V+I DI++ P+ GP+MF+ Q+LMD+ M++ GRQRD NDWR L KAGFSDYK++KK G
Sbjct: 224 VIIIDILVGPSLGPIMFEAQILMDMAMLVNTRGRQRDENDWRQLFMKAGFSDYKVVKKLG 403
Query: 394 ARGVLEIYP*GIS 356
ARGV E+Y * +S
Sbjct: 404 ARGVFEVYK*RVS 442
Score = 155 bits (333), Expect = 9e-039
Identities = 76/127 (59%), Positives = 86/127 (67%)
Frame = +3 / -3
Query: 378 SRTPRAPNFFSSL*SLKPAFWMRSRQSFTSRCRPPFISIMQTSIRS*V*NMTGPEAGSRI 557
S+TPRAPNF ++L*SL PAF RQSF+SR RP + M SIR * N+ GP G
Sbjct: 420 SKTPRAPNFLTTL*SLNPAFMKS*RQSFSSR*RPLVFTSMAMSIRI*ASNIIGPSEGPTR 241
Query: 558 ISAMTTFPPSSREGIAFLQLARIFTQSSSLQWCSTILSNTI*ARGMDLNMSPPT*LTTPS 737
IS M TFPPSSREG+A L +IFTQSSSLQWCST LSNT * G + N SP T*LT PS
Sbjct: 240 ISMMITFPPSSREGMALLH*DKIFTQSSSLQWCSTSLSNTA*DFGTEWNKSPAT*LTIPS 61
Query: 738 AGILRIS 758
G I+
Sbjct: 60 DGTFSIT 40
Score = 152 bits (327), Expect = 6e-038
Identities = 69/130 (53%), Positives = 83/130 (63%)
Frame = +2 / -2
Query: 371 IDLQDTSSSKFLQQLVVTETCFLDEVTPVIHVPLPASFHQHHADVH*ELSLKHDWS*GWV 550
+D +DTS S FL +VTE CF +E+TPVI + L AS H VH LS KH WS*
Sbjct: 427 VDFEDTSCS*FLDNFIVTEPCFHEELTPVIFITLTASCVHKHGHVHQNLSFKHYWS*RRS 248
Query: 551 ENNICDDNLPSLFP*RYCLPAVGKDLHAVLITPVVQHHLK*HHLSTWDGFEHVTSNIVNN 730
NI DD+LPSL *R P + +DLH V+ITPVVQH L+ H L WDG E +TSNIV++
Sbjct: 247 NQNIYDDHLPSLLT*RNGTPTLRQDLHTVVITPVVQHKLEQHRLRLWDGVEQITSNIVDD 68
Query: 731 TISRYLANLL 760
TI R N L
Sbjct: 67 TIRRNFLNHL 38
Score = 100 bits (214), Expect = 2e-022
Identities = 60/131 (45%), Positives = 70/131 (53%)
Frame = -2 / +3
Query: 747 RYRLMVLLTMLEVTCSNPSHVLKWCYLRWCCTTGVMRTA*RSLPTAGRQYLHGKREGRLS 568
++RLMV TML V CS PS L+ C CCTTGVM T *RS + G +LH +REGR S
Sbjct: 51 KFRLMVSSTMLLVICSTPSQSLRRCCSSLCCTTGVMTTV*RSCLSVGVPFLHVRREGR*S 230
Query: 567 SQILFSTQPQDQSCFKLNS*WTSA*C**KEAXXXXXXXXXXXSRKQVSVTTSC*RNLELE 388
S I + DQ C KL *WT * +EA S KQ SVT RN E E
Sbjct: 231 S*IFWLDLR*DQ*CLKLRF*WTWPCL*TQEAVNVMKMTGVSSS*KQGSVTIKLSRN*EHE 410
Query: 387 VSWRSIPKASP 355
VS +S + P
Sbjct: 411 VSSKSTSEGFP 443
Score = 26.3 bits (51), Expect(2) = 2e-063
Identities = 11/16 (68%), Positives = 13/16 (81%)
Frame = -1 / +3
Query: 793 PLIKITVLDLPQEIRK 746
P IK TVLDLP+ +RK
Sbjct: 6 PHIKCTVLDLPR*LRK 53
>gb|CN816101.1|CN816101 HRO4517_A05_A09ZS5 Lib AA071E1X Avena sativa cv. Ogle-C root Avena
sativa cDNA clone HRO4517_A05_A09, mRNA sequence
Length = 652
Score = 231 bits (498), Expect = 2e-061
Identities = 89/146 (60%), Positives = 116/146 (79%)
Frame = -1 / +3
Query: 802 KAFPLIKITVLDLPQEIRKIPADGVVNYVGGDMFKSIPRAQMVLLKMVLHHWSDEDCVKI 623
KA+P +K TVLDLP+ I K P V+NYV GD+F ++P +Q V+LK+VLH WSDEDCVKI
Sbjct: 15 KAYPHLKCTVLDLPKVIEKAPPHDVINYVAGDLFHTVPPSQAVMLKLVLHFWSDEDCVKI 194
Query: 622 LANCRKAIPSREEGGKVVIADIILDPASGPVMFQTQLLMDVCMMLMKGGRQRDVNDWRDL 443
LA CRKAIPSREEGGKV+I +I+++P+ GP+MF+ QLL D+ MM+ G QRD WR+L
Sbjct: 195 LAQCRKAIPSREEGGKVIIIEIVVEPSLGPIMFEAQLLFDMLMMVNTRGGQRDEKHWREL 374
Query: 442 IQKAGFSDYKLLKKFGARGVLEIYP* 365
+AGF+DYK++KK GAR V+E+YP*
Sbjct: 375 FMQAGFTDYKIVKKLGARSVIEVYP* 452
Score = 141 bits (303), Expect = 1e-034
Identities = 81/145 (55%), Positives = 91/145 (62%)
Frame = +3 / -1
Query: 369 G*ISRTPRAPNFFSSL*SLKPAFWMRSRQSFTSRCRPPFISIMQTSIRS*V*NMTGPEAG 548
G* S T RAP+FF+ L*S+ PA SRQ F+SR P +IM S RS N+ GP+ G
Sbjct: 448 G*TSMTDRAPSFFTIL*SVNPACINSSRQCFSSR*PPLVFTIMSISKRSWASNIIGPKEG 269
Query: 549 SRIISAMTTFPPSSREGIAFLQLARIFTQSSSLQWCSTILSNTI*ARGMDLNMSPPT*LT 728
S IS + TFPPSSREG+AFL ARIFTQSSSLQ ST LS T * G SP T*L
Sbjct: 268 STTISMIITFPPSSREGMAFLHWARIFTQSSSLQK*STSLSITA*DGGTVWKRSPAT*LM 89
Query: 729 TPSAGILRISCGRSSTVILISGKAL 803
T G I+ GRSSTV L G AL
Sbjct: 88 TS*GGAFSITFGRSSTVHLRCG*AL 14
Score = 110 bits (234), Expect = 4e-025
Identities = 57/135 (42%), Positives = 77/135 (57%)
Frame = +2 / -3
Query: 365 LGIDLQDTSSSKFLQQLVVTETCFLDEVTPVIHVPLPASFHQHHADVH*ELSLKHDWS*G 544
L ++L D SSS+FL VV E +TPV+ + L S HH + EL LKH WS G
Sbjct: 452 LRVNLDDGSSSQFLHNFVVCEPRLHK*LTPVLFITLTPSCVHHHEHIKKELGLKHYWSQG 273
Query: 545 WVENNICDDNLPSLFP*RYCLPAVGKDLHAVLITPVVQHHLK*HHLSTWDGFEHVTSNIV 724
+++ D LPSL *R LPA+G D H +LI P V+H L+ H L +G E VT NIV
Sbjct: 272 RFDHDFYDYYLPSLLA*RNGLPALG*DFHTILIAPKVKHKLEHHSLRWGNGVEEVTGNIV 93
Query: 725 NNTISRYLANLLRKV 769
++ + + LR+V
Sbjct: 92 DDIMRWGFFDHLREV 48
>gb|CN821053.1|CN821053 HRO4427_A04_B07ZS5 Lib AA069E1X Avena sativa cv. Ogle-C etiolated
leaf Avena sativa cDNA clone HRO4427_A04_B07, mRNA
sequence
Length = 644
Score = 228 bits (493), Expect = 8e-061
Identities = 85/128 (66%), Positives = 108/128 (84%)
Frame = -1 / +3
Query: 754 IRKIPADGVVNYVGGDMFKSIPRAQMVLLKMVLHHWSDEDCVKILANCRKAIPSREEGGK 575
I K+P+DG+VNYV GD+F S+P++Q VLLK+VLHHWSDEDCVKIL+ CR AIPSRE+GGK
Sbjct: 12 IDKVPSDGIVNYVAGDLFHSVPKSQAVLLKLVLHHWSDEDCVKILSQCRNAIPSREKGGK 191
Query: 574 VVIADIILDPASGPVMFQTQLLMDVCMMLMKGGRQRDVNDWRDLIQKAGFSDYKLLKKFG 395
V+I DI++ P+ GP+MF+ Q+LMD+ M++ GRQRD NDWR L KAGFSDYK++KK G
Sbjct: 192 VIIIDILVGPSLGPIMFEAQILMDMAMLVNTRGRQRDENDWRQLFMKAGFSDYKIVKKLG 371
Query: 394 ARGVLEIY 371
ARGV E+Y
Sbjct: 372 ARGVFEVY 395
Score = 155 bits (333), Expect = 9e-039
Identities = 77/126 (61%), Positives = 85/126 (67%)
Frame = +3 / -2
Query: 378 SRTPRAPNFFSSL*SLKPAFWMRSRQSFTSRCRPPFISIMQTSIRS*V*NMTGPEAGSRI 557
S+TPRAPNF + L*SL PAF RQSF+SR RP + M SIR * N+ GP G
Sbjct: 388 SKTPRAPNFLTIL*SLNPAFMKS*RQSFSSR*RPLVFTSMAMSIRI*ASNIIGPSEGPTR 209
Query: 558 ISAMTTFPPSSREGIAFLQLARIFTQSSSLQWCSTILSNTI*ARGMDLNMSPPT*LTTPS 737
+S M TFPP SREGIAFL +IFTQSSSLQWCST LSNT * G + N SP T*LT PS
Sbjct: 208 MSMMITFPPFSREGIAFLH*DKIFTQSSSLQWCSTSLSNTA*DFGTEWNKSPAT*LTIPS 29
Query: 738 AGILRI 755
G L I
Sbjct: 28 DGTLSI 11
Score = 153 bits (328), Expect = 4e-038
Identities = 67/128 (52%), Positives = 82/128 (64%)
Frame = +2 / -1
Query: 371 IDLQDTSSSKFLQQLVVTETCFLDEVTPVIHVPLPASFHQHHADVH*ELSLKHDWS*GWV 550
+D +DTS S FL +VTE CF +E+TPVI + L AS H VH LS KH WS*
Sbjct: 395 VDFEDTSCS*FLDNFIVTEPCFHEELTPVIFITLTASCVHKHGHVHQNLSFKHYWS*RRS 216
Query: 551 ENNICDDNLPSLFP*RYCLPAVGKDLHAVLITPVVQHHLK*HHLSTWDGFEHVTSNIVNN 730
N+ DD+LPSL *R +P + DLH +LITPVVQH L+ H L WDG E VTSNIV++
Sbjct: 215 NQNVYDDHLPSLLT*RNSIPTLR*DLHTILITPVVQHKLEQHRLRLWDGVEQVTSNIVDD 36
Query: 731 TISRYLAN 754
T+ R N
Sbjct: 35 TVRRNFVN 12
Score = 99.1 bits (210), Expect = 8e-022
Identities = 59/131 (45%), Positives = 69/131 (52%)
Frame = -2 / +1
Query: 747 RYRLMVLLTMLEVTCSNPSHVLKWCYLRWCCTTGVMRTA*RSLPTAGRQYLHGKREGRLS 568
++RL V TML VTCS PS L+ C CCTTGVMR *RS + G +LH +REGR S
Sbjct: 19 KFRLTVSSTMLLVTCSTPSQSLRRCCSSLCCTTGVMRIV*RSYLSVGMLFLHVRREGR*S 198
Query: 567 SQILFSTQPQDQSCFKLNS*WTSA*C**KEAXXXXXXXXXXXSRKQVSVTTSC*RNLELE 388
S + DQ C KL *WT * +EA S KQ SVT RN E E
Sbjct: 199 S*TFWLDLR*DQ*CLKLRF*WTWPCL*TQEAVNVMKMTGVSSS*KQGSVTIKLSRN*EHE 378
Query: 387 VSWRSIPKASP 355
VS +S + P
Sbjct: 379 VSSKSTSEGIP 411
>gb|CN815850.1|CN815850 HRO4511_B09_D17ZS5 Lib AA071E1X Avena sativa cv. Ogle-C root Avena
sativa cDNA clone HRO4511_B09_D17, mRNA sequence
Length = 621
Score = 217 bits (469), Expect = 2e-057
Identities = 82/129 (63%), Positives = 106/129 (82%)
Frame = -1 / +2
Query: 742 PADGVVNYVGGDMFKSIPRAQMVLLKMVLHHWSDEDCVKILANCRKAIPSREEGGKVVIA 563
P+DG+V YV GD+F S+P++Q V+LK+VLH WSDEDCVKIL+ C+ AIPSREEGGKV+I
Sbjct: 2 PSDGIVYYVAGDLFHSVPKSQAVMLKLVLHRWSDEDCVKILSQCKSAIPSREEGGKVIII 181
Query: 562 DIILDPASGPVMFQTQLLMDVCMMLMKGGRQRDVNDWRDLIQKAGFSDYKLLKKFGARGV 383
DI++ P+ GP+MF+ Q+LMD+ M++ GRQRD NDWR L KAGFSDYK++KK GARGV
Sbjct: 182 DILVGPSLGPIMFEAQVLMDMAMLVNTRGRQRDENDWRQLFMKAGFSDYKIVKKVGARGV 361
Query: 382 LEIYP*GIS 356
E+Y * +S
Sbjct: 362 FEVYK*RVS 388
Score = 147 bits (315), Expect = 3e-036
Identities = 65/124 (52%), Positives = 79/124 (63%)
Frame = +2 / -3
Query: 371 IDLQDTSSSKFLQQLVVTETCFLDEVTPVIHVPLPASFHQHHADVH*ELSLKHDWS*GWV 550
+D +DTS S FL +VTE CF +E+TPVI + L AS H VH L KH WS*G
Sbjct: 373 VDFEDTSCSYFLDNFIVTEPCFHEELTPVIFITLTASCVDKHGHVHQNLGFKHYWS*GRS 194
Query: 551 ENNICDDNLPSLFP*RYCLPAVGKDLHAVLITPVVQHHLK*HHLSTWDGFEHVTSNIVNN 730
NI DD+LPSL *R + +DLH +LITP VQH L+ H L WDG E VTSN+V++
Sbjct: 193 NQNIYDDHLPSLLT*RNGTLTLRQDLHTILITPAVQHKLEHHGLRLWDGVEQVTSNVVDD 14
Query: 731 TISR 742
TI R
Sbjct: 13 TIRR 2
Score = 135 bits (290), Expect = 8e-033
Identities = 70/122 (57%), Positives = 80/122 (65%)
Frame = +3 / -1
Query: 378 SRTPRAPNFFSSL*SLKPAFWMRSRQSFTSRCRPPFISIMQTSIRS*V*NMTGPEAGSRI 557
S+TPRAP F + L*SL PAF RQSF+SR RP ++ M SIR+ N+ GP G
Sbjct: 366 SKTPRAPTFLTIL*SLNPAFMKS*RQSFSSR*RPLVLTSMAMSIRTWASNIIGPREGPTR 187
Query: 558 ISAMTTFPPSSREGIAFLQLARIFTQSSSLQWCSTILSNTI*ARGMDLNMSPPT*LTTPS 737
IS M TFPPSSREG+A L +IFTQSSSLQ CST LS T * G + N SP T* T PS
Sbjct: 186 ISMMITFPPSSREGMALLH*DKIFTQSSSLQRCSTSLSITA*DFGTEWNKSPAT**TIPS 7
Query: 738 AG 743
G
Sbjct: 6 DG 1
>gb|CN814789.1|CN814789 HRO4502_E05_I10ZS5 Lib AA071E1X Avena sativa cv. Ogle-C root Avena
sativa cDNA clone HRO4502_E05_I10, mRNA sequence
Length = 596
Score = 195 bits (420), Expect(2) = 8e-051
Identities = 73/109 (66%), Positives = 92/109 (84%)
Frame = -1 / -3
Query: 697 SIPRAQMVLLKMVLHHWSDEDCVKILANCRKAIPSREEGGKVVIADIILDPASGPVMFQT 518
S+P++Q VLLK+VLHHWSDEDCVKIL+ CR AIPSRE+GGKV+I DI++ P+ GP+MF+
Sbjct: 591 SVPKSQAVLLKLVLHHWSDEDCVKILSQCRNAIPSREKGGKVIIIDILVGPSLGPIMFEA 412
Query: 517 QLLMDVCMMLMKGGRQRDVNDWRDLIQKAGFSDYKLLKKFGARGVLEIY 371
Q+LMD+ M++ GRQRD NDWR L KAGFSDYK++KK GARGV E+Y
Sbjct: 411 QILMDMAMLVNTRGRQRDENDWRQLFMKAGFSDYKIVKKLGARGVFEVY 265
Score = 133 bits (285), Expect = 4e-032
Identities = 65/107 (60%), Positives = 73/107 (68%)
Frame = +3 / +2
Query: 378 SRTPRAPNFFSSL*SLKPAFWMRSRQSFTSRCRPPFISIMQTSIRS*V*NMTGPEAGSRI 557
S+TPRAPNF + L*SL PAF RQSF+SR RP + M SIR * N+ GP G
Sbjct: 272 SKTPRAPNFLTIL*SLNPAFMKS*RQSFSSR*RPLVFTSMAMSIRI*ASNIIGPSEGPTR 451
Query: 558 ISAMTTFPPSSREGIAFLQLARIFTQSSSLQWCSTILSNTI*ARGMD 698
+S M TFPP SREGIAFL +IFTQSSSLQWCST LSNT * G +
Sbjct: 452 MSMMITFPPFSREGIAFLH*DKIFTQSSSLQWCSTSLSNTA*DFGTE 592
Score = 130 bits (279), Expect = 3e-031
Identities = 57/109 (52%), Positives = 69/109 (63%)
Frame = +2 / +1
Query: 371 IDLQDTSSSKFLQQLVVTETCFLDEVTPVIHVPLPASFHQHHADVH*ELSLKHDWS*GWV 550
+D +DTS S FL +VTE CF +E+TPVI + L AS H VH LS KH WS*
Sbjct: 265 VDFEDTSCS*FLDNFIVTEPCFHEELTPVIFITLTASCVHKHGHVHQNLSFKHYWS*RRS 444
Query: 551 ENNICDDNLPSLFP*RYCLPAVGKDLHAVLITPVVQHHLK*HHLSTWDG 697
N+ DD+LPSL *R +P + DLH +LITPVVQH L+ H L WDG
Sbjct: 445 NQNVYDDHLPSLLT*RNSIPTLR*DLHTILITPVVQHKLEQHRLRLWDG 591
Score = 22.6 bits (43), Expect(2) = 8e-051
Identities = 8/23 (34%), Positives = 12/23 (52%)
Frame = -2 / -2
Query: 165 SRHIMRCYIYRTYSINMYPPSRC 97
S +R + + IN+YPP C
Sbjct: 289 STRCLRSLQVKGFLINVYPPRAC 221
>gb|CN816425.1|CN816425 HRO4520_F02_L04ZS5 Lib AA071E1X Avena sativa cv. Ogle-C root Avena
sativa cDNA clone HRO4520_F02_L04, mRNA sequence
Length = 538
Score = 166 bits (356), Expect(2) = 4e-042
Identities = 62/93 (66%), Positives = 77/93 (82%)
Frame = -1 / +1
Query: 649 WSDEDCVKILANCRKAIPSREEGGKVVIADIILDPASGPVMFQTQLLMDVCMMLMKGGRQ 470
WSDEDCVKIL+ CR AIPSRE+GGKV+I DI++ P+ GP+MF+ Q+LMD+ M++ GRQ
Sbjct: 13 WSDEDCVKILSQCRNAIPSREKGGKVIIIDILVGPSLGPIMFEAQILMDMAMLVNTRGRQ 192
Query: 469 RDVNDWRDLIQKAGFSDYKLLKKFGARGVLEIY 371
RD NDWR L KAGFSDYK++KK GARGV E+Y
Sbjct: 193 RDENDWRQLFMKAGFSDYKIVKKLGARGVFEVY 291
Score = 109 bits (232), Expect = 8e-025
Identities = 54/90 (60%), Positives = 61/90 (67%)
Frame = +3 / -3
Query: 378 SRTPRAPNFFSSL*SLKPAFWMRSRQSFTSRCRPPFISIMQTSIRS*V*NMTGPEAGSRI 557
S+TPRAPNF + L*SL PAF RQSF+SR RP + M SIR * N+ GP G
Sbjct: 284 SKTPRAPNFLTIL*SLNPAFMKS*RQSFSSR*RPLVFTSMAMSIRI*ASNIIGPSEGPTR 105
Query: 558 ISAMTTFPPSSREGIAFLQLARIFTQSSSL 647
+S M TFPP SREGIAFL +IFTQSSSL
Sbjct: 104 MSMMITFPPFSREGIAFLH*DKIFTQSSSL 15
Score = 105 bits (225), Expect = 7e-024
Identities = 47/93 (50%), Positives = 58/93 (62%)
Frame = +2 / -2
Query: 371 IDLQDTSSSKFLQQLVVTETCFLDEVTPVIHVPLPASFHQHHADVH*ELSLKHDWS*GWV 550
+D +DTS S FL +VTE CF +E+TPVI + L AS H VH LS KH WS*
Sbjct: 291 VDFEDTSCS*FLDNFIVTEPCFHEELTPVIFITLTASCVHKHGHVHQNLSFKHYWS*RRS 112
Query: 551 ENNICDDNLPSLFP*RYCLPAVGKDLHAVLITP 649
N+ DD+LPSL *R +P + DLH +LITP
Sbjct: 111 NQNVYDDHLPSLLT*RNSIPTLR*DLHTILITP 13
Score = 22.6 bits (43), Expect(2) = 4e-042
Identities = 8/23 (34%), Positives = 12/23 (52%)
Frame = -2 / +3
Query: 165 SRHIMRCYIYRTYSINMYPPSRC 97
S +R + + IN+YPP C
Sbjct: 267 STRCLRSLQVKGFLINVYPPRAC 335
>gb|CN814955.1|CN814955 HRO4504_C09_F18ZS5 Lib AA071E1X Avena sativa cv. Ogle-C root Avena
sativa cDNA clone HRO4504_C09_F18, mRNA sequence
Length = 648
Score = 135 bits (290), Expect = 8e-033
Identities = 53/86 (61%), Positives = 66/86 (76%)
Frame = -1 / +1
Query: 736 DGVVNYVGGDMFKSIPRAQMVLLKMVLHHWSDEDCVKILANCRKAIPSREEGGKVVIADI 557
+GVVNYV GDMFK +P AQ VL+K+VLHHWSDEDCVKILA C+KA+PSREEGGKV++ DI
Sbjct: 7 EGVVNYVAGDMFKLVPPAQAVLVKLVLHHWSDEDCVKILAQCKKAVPSREEGGKVIVIDI 186
Query: 556 ILDPASGPVMFQTQLLMDVCMMLMKG 479
++D +SGP L+ M+ G
Sbjct: 187 VVDSSSGPTHEAELLMDVAMMVFTNG 264
Score = 105 bits (225), Expect(2) = 5e-036
Identities = 48/68 (70%), Positives = 51/68 (75%)
Frame = +3 / -2
Query: 534 GPEAGSRIISAMTTFPPSSREGIAFLQLARIFTQSSSLQWCSTILSNTI*ARGMDLNMSP 713
GPE S +S TFPPSSR+G AFL ARIFTQSSSLQWC T L+NT *A G LNMSP
Sbjct: 209 GPEEESTTMSMTITFPPSSRDGTAFLH*ARIFTQSSSLQWCRTSLTNTA*AGGTSLNMSP 30
Query: 714 PT*LTTPS 737
T*LTTPS
Sbjct: 29 AT*LTTPS 6
Score = 68.9 bits (144), Expect(2) = 4e-022
Identities = 33/68 (48%), Positives = 44/68 (64%)
Frame = +2 / -1
Query: 533 WS*GWVENNICDDNLPSLFP*RYCLPAVGKDLHAVLITPVVQHHLK*HHLSTWDGFEHVT 712
WS* V + + DD+ PSL R L A+ DLHAVL+TPVVQ+ L H LS D EHV
Sbjct: 210 WS*RRVHDYVDDDHFPSLLSRRNGLLALS*DLHAVLVTPVVQNKLDQHSLSWRDELEHVA 31
Query: 713 SNIVNNTI 736
++V++T+
Sbjct: 30 GDVVDHTL 7
Score = 60.2 bits (125), Expect(2) = 5e-036
Identities = 29/49 (59%), Positives = 34/49 (69%)
Frame = +3 / -2
Query: 369 G*ISRTPRAPNFFSSL*SLKPAFWMRSRQSFTSRCRPPFISIMQTSIRS 515
G S+TPRAP+FF+ L* L PA S QS +SRCRP +IM TSIRS
Sbjct: 371 GYTSKTPRAPSFFTML*PLNPALVKMSPQSDSSRCRPLVNTIMATSIRS 225
Score = 50.6 bits (104), Expect(2) = 4e-022
Identities = 22/49 (44%), Positives = 31/49 (63%)
Frame = +2 / -1
Query: 371 IDLQDTSSSKFLQQLVVTETCFLDEVTPVIHVPLPASFHQHHADVH*EL 517
I L+DT+SS+FL ++ T++CF + V PV V L A HH +H EL
Sbjct: 369 IYLKDTTSSQFLHNVIATKSCFGENVAPVRLVALSAIGEHHHGYIHQEL 223
>gb|CN820644.1|CN820644 HRO4415_G07_N13ZS5 Lib AA069E1X Avena sativa cv. Ogle-C etiolated
leaf Avena sativa cDNA clone HRO4415_G07_N13, mRNA
sequence
Length = 614
Score = 102 bits (218), Expect = 7e-023
Identities = 40/64 (62%), Positives = 50/64 (78%)
Frame = -1 / +2
Query: 670 LKMVLHHWSDEDCVKILANCRKAIPSREEGGKVVIADIILDPASGPVMFQTQLLMDVCMM 491
+K+VLHHWSDEDCVKILA C+KAIPSREEGGKV++ DI++DP+SGP L+ M+
Sbjct: 11 VKLVLHHWSDEDCVKILAQCKKAIPSREEGGKVIVIDILVDPSSGPTHEAELLVDVAMMV 190
Query: 490 LMKG 479
L G
Sbjct: 191 LTNG 202
Score = 77.1 bits (162), Expect(2) = 3e-026
Identities = 32/46 (69%), Positives = 37/46 (80%)
Frame = +3 / -3
Query: 534 GPEAGSRIISAMTTFPPSSREGIAFLQLARIFTQSSSLQWCSTILS 671
GPE GS +S TFPPSSR+G+AFL ARIFTQSSSLQWC+T L+
Sbjct: 147 GPEEGSTSMSMTITFPPSSRDGMAFLH*ARIFTQSSSLQWCNTSLT 10
Score = 56.1 bits (116), Expect(2) = 3e-026
Identities = 27/49 (55%), Positives = 33/49 (67%)
Frame = +3 / -3
Query: 369 G*ISRTPRAPNFFSSL*SLKPAFWMRSRQSFTSRCRPPFISIMQTSIRS 515
G S+TPRAP+FF+ L* + PA S QS +SRCRP +IM TS RS
Sbjct: 309 GYTSKTPRAPSFFTML*PVNPALVKISAQSDSSRCRPLVKTIMATSTRS 163
>gb|CN816150.1|CN816150 HRO4517_E08_I15ZS5 Lib AA071E1X Avena sativa cv. Ogle-C root Avena
sativa cDNA clone HRO4517_E08_I15, mRNA sequence
Length = 455
Score = 108 bits (230), Expect = 1e-024
Identities = 41/68 (60%), Positives = 53/68 (77%)
Frame = -1 / +1
Query: 562 DIILDPASGPVMFQTQLLMDVCMMLMKGGRQRDVNDWRDLIQKAGFSDYKLLKKFGARGV 383
DI++DP+S M +TQLLMDV M+ GRQRD NDW + KAGF+DYK++KK GARGV
Sbjct: 1 DIVVDPSSSGPMLETQLLMDVLMLTCTRGRQRDENDWSSIFTKAGFNDYKIIKKLGARGV 180
Query: 382 LEIYP*GI 359
+E+YP*G+
Sbjct: 181 IEVYP*GV 204
>gb|CN814894.1|CN814894 HRO4503_F08_L15ZS5 Lib AA071E1X Avena sativa cv. Ogle-C root Avena
sativa cDNA clone HRO4503_F08_L15, mRNA sequence
Length = 567
Score = 105 bits (224), Expect = 1e-023
Identities = 41/67 (61%), Positives = 51/67 (76%)
Frame = -1 / +3
Query: 562 DIILDPASGPVMFQTQLLMDVCMMLMKGGRQRDVNDWRDLIQKAGFSDYKLLKKFGARGV 383
DI++DP+S M +TQLLMDV M+ GRQRD NDW + KAGFSDYK++K GARGV
Sbjct: 15 DIVVDPSSSGPMLETQLLMDVLMLTCTRGRQRDENDWSSIFTKAGFSDYKIIKMLGARGV 194
Query: 382 LEIYP*G 362
+E+YP*G
Sbjct: 195 IEVYP*G 215
>gb|CN814875.1|CN814875 HRO4503_D10_H19ZS5 Lib AA071E1X Avena sativa cv. Ogle-C root Avena
sativa cDNA clone HRO4503_D10_H19, mRNA sequence
Length = 846
Score = 98.7 bits (209), Expect = 1e-021
Identities = 37/96 (38%), Positives = 61/96 (63%)
Frame = -1 / +1
Query: 652 HWSDEDCVKILANCRKAIPSREEGGKVVIADIILDPASGPVMFQTQLLMDVCMMLMKGGR 473
H DEDCVKIL C++AIPSR+ GGKV+I D+++ ++ + + ++ G
Sbjct: 4 HEGDEDCVKILKKCKEAIPSRDAGGKVIIVDMVVGSGPNDIVTRETQVFFDLFIMYLEGI 183
Query: 472 QRDVNDWRDLIQKAGFSDYKLLKKFGARGVLEIYP* 365
+R+ +W+ + +AGFS+YK++ G R V+E+YP*
Sbjct: 184 EREEFEWKKIFMEAGFSEYKIISVLGVRSVIELYP* 291
Database: Avena_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:15 PM
Number of letters in database: 4,702,463
Number of sequences in database: 8143
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 10,632,039
Number of Sequences: 8143
Number of extensions: 157110
Number of successful extensions: 1085
Number of sequences better than 1.0e-020: 13
length of database: 1,567,487
effective HSP length: 43
effective length of database: 1,217,338
effective search space used: 289726444
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)