TBLASTX 2.2.10 [Oct-19-2004]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 2521589.2.1
         (1689 letters)

Database: Avena_nucl_with_EST.fasta 
           8143 sequences; 4,702,463 total letters



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|CN815399.1|CN815399  HRO4509_C02_E03ZS5 Lib AA071E1X Aven...    84   4e-031

>gb|CN815399.1|CN815399 HRO4509_C02_E03ZS5 Lib AA071E1X Avena sativa cv. Ogle-C root Avena
           sativa cDNA clone HRO4509_C02_E03, mRNA sequence
          Length = 660

 Score = 83.5 bits (176), Expect(3) = 4e-031
 Identities = 33/78 (42%), Positives = 48/78 (61%)
 Frame = -3 / +1

                                                                       
Query: 667 VPVTEPDLERLPYLQAIVKETLRLRMAIPLLVPHMNLNDGKLAGYDIPAESKILVNAWFL 488
           V +T  DL  L Y++ ++KE LRL    PLL+P     D ++ GY+IP  + I +NA+ +
Sbjct: 139 VVITNSDLGELHYMRMVIKEVLRLHPPFPLLLPRETREDCEIMGYNIPKGTNIYINAFAI 318

                             
Query: 487 ANDPKRWVRPDEFRPERF 434
           ++DP  W  P EF PERF
Sbjct: 319 SHDPVFWDNPTEFNPERF 372




 Score = 45.1 bits (92), Expect(3) = 4e-031
 Identities = 17/41 (41%), Positives = 30/41 (73%)
 Frame = -3 / +1

                                                    
Query: 796 ENINVAAIETTLWSIEWGIAELVNHPAIQHKLREELASVLG 674
           E++  AA ETT  ++EW ++EL+N+P +  K+++E+  VLG
Sbjct: 7   EDLFGAATETTSTALEWTMSELINNPEVMAKVQKEVREVLG 129




 Score = 40.0 bits (81), Expect(3) = 4e-031
 Identities = 17/52 (32%), Positives = 21/52 (40%)
 Frame = -3 / +1

                                                               
Query: 427 EEKSVEAHGNDFRFVPFGVGRRSCPXXXXXXXXXXXXXGRLVQNFQLLPPPG 272
           E  +V   G  F+F PFG GRR CP               L+ +F    P G
Sbjct: 373 ENNNVNYDGTHFKFTPFGSGRRICPGIFFATSTIEIALANLLYHFDWKLPDG 528



  Database: Avena_nucl_with_EST.fasta
    Posted date:  Feb 7, 2006  2:15 PM
  Number of letters in database: 4,702,463
  Number of sequences in database:  8143
  
Lambda     K      H
   0.318    0.134    0.401 


Matrix: BLOSUM62
Number of Hits to DB: 13,165,385
Number of Sequences: 8143
Number of extensions: 177222
Number of successful extensions: 2071
Number of sequences better than 1.0e-020: 1
length of database: 1,567,487
effective HSP length: 45
effective length of database: 1,201,052
effective search space used: 620943884
frameshift window, decay const: 40,  0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)