TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2455878.2.1
(1327 letters)
Database: Avena_nucl_with_EST.fasta
8143 sequences; 4,702,463 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CN815034.1|CN815034 HRO4505_B06_C11ZS5 Lib AA071E1X Aven... 208 1e-059
gb|CN816873.1|CN816873 HRO4525_G05_M09ZS5 Lib AA071E1X Aven... 208 1e-056
gb|CN816101.1|CN816101 HRO4517_A05_A09ZS5 Lib AA071E1X Aven... 203 1e-056
gb|CN815850.1|CN815850 HRO4511_B09_D17ZS5 Lib AA071E1X Aven... 204 2e-053
gb|CN814789.1|CN814789 HRO4502_E05_I10ZS5 Lib AA071E1X Aven... 204 4e-053
gb|CN821053.1|CN821053 HRO4427_A04_B07ZS5 Lib AA069E1X Aven... 204 4e-053
gb|CN816425.1|CN816425 HRO4520_F02_L04ZS5 Lib AA071E1X Aven... 183 4e-047
gb|CN814955.1|CN814955 HRO4504_C09_F18ZS5 Lib AA071E1X Aven... 95 8e-042
gb|CN820644.1|CN820644 HRO4415_G07_N13ZS5 Lib AA069E1X Aven... 77 2e-028
gb|CN814894.1|CN814894 HRO4503_F08_L15ZS5 Lib AA071E1X Aven... 109 1e-024
gb|CN816150.1|CN816150 HRO4517_E08_I15ZS5 Lib AA071E1X Aven... 107 5e-024
gb|CN814875.1|CN814875 HRO4503_D10_H19ZS5 Lib AA071E1X Aven... 105 2e-023
>gb|CN815034.1|CN815034 HRO4505_B06_C11ZS5 Lib AA071E1X Avena sativa cv. Ogle-C root Avena
sativa cDNA clone HRO4505_B06_C11, mRNA sequence
Length = 629
Score = 208 bits (448), Expect(2) = 1e-059
Identities = 82/105 (78%), Positives = 95/105 (90%)
Frame = +2 / +1
Query: 785 AQAVMLKLVLHFWSDDDCVKILELCRKAIPSREEGGKVIIIEILLGPYMGPVMYEAQLLM 964
+QAV+LKLVLH WSDDDCVKIL CR AIPSREEGGKVIII+IL+GP +GP+M+EAQ+LM
Sbjct: 166 SQAVLLKLVLHHWSDDDCVKILSQCRSAIPSREEGGKVIIIDILVGPSLGPIMFEAQILM 345
Query: 965 DMLMMVNTKGRQRGEDDWRHIFTKAGFSDYKVVKKIGARGVIEVY 1099
DM M+VNT+GRQR E+DWR +F KAGFSDYKVVKK+GARGV EVY
Sbjct: 346 DMAMLVNTRGRQRDENDWRQLFMKAGFSDYKVVKKLGARGVFEVY 480
Score = 138 bits (297), Expect(2) = 5e-036
Identities = 70/103 (67%), Positives = 74/103 (71%)
Frame = -2 / -1
Query: 1098 *TSMTPRAPIFLTTL*SEKPALVKMWRQSSSPRCLPLVLTIMSMSISSWASYMTGPMYGP 919
*TS TPRAP FLTTL*S PA +K RQS S R PLV T M+MSI AS + GP GP
Sbjct: 479 *TSKTPRAPNFLTTL*SLNPAFMKS*RQSFSSR*RPLVFTSMAMSIRI*ASNIIGPSEGP 300
Query: 918 RSISMMITFPPSSREGMAFLHSSRILTQSSSLQKCRTSLSMTA 790
ISMMITFPPSSREGMA LH +I TQSSSLQ C TSLS TA
Sbjct: 299 TRISMMITFPPSSREGMALLH*DKIFTQSSSLQWCSTSLSNTA 171
Score = 38.2 bits (77), Expect(2) = 1e-059
Identities = 16/28 (57%), Positives = 19/28 (67%)
Frame = +2 / +1
Query: 659 CGRQGNASAAAIVKAFPDIKCTVLNLPR 742
CG +A AI KA P IKCTVL+LP+
Sbjct: 10 CGGGD*TTARAITKAHPHIKCTVLDLPK 93
Score = 28.1 bits (55), Expect(2) = 5e-036
Identities = 11/18 (61%), Positives = 13/18 (72%)
Frame = -1 / -3
Query: 736 KVEHGALDVWEGLDDGGR 683
K++H ALDV GL DG R
Sbjct: 87 KIQHSALDVRMGLGDGPR 34
>gb|CN816873.1|CN816873 HRO4525_G05_M09ZS5 Lib AA071E1X Avena sativa cv. Ogle-C root Avena
sativa cDNA clone HRO4525_G05_M09, mRNA sequence
Length = 662
Score = 208 bits (448), Expect(2) = 1e-056
Identities = 82/105 (78%), Positives = 95/105 (90%)
Frame = +2 / +2
Query: 785 AQAVMLKLVLHFWSDDDCVKILELCRKAIPSREEGGKVIIIEILLGPYMGPVMYEAQLLM 964
+QAV+LKLVLH WSDDDCVKIL CR AIPSREEGGKVIII+IL+GP +GP+M+EAQ+LM
Sbjct: 113 SQAVLLKLVLHHWSDDDCVKILSQCRSAIPSREEGGKVIIIDILVGPSLGPIMFEAQILM 292
Query: 965 DMLMMVNTKGRQRGEDDWRHIFTKAGFSDYKVVKKIGARGVIEVY 1099
DM M+VNT+GRQR E+DWR +F KAGFSDYKVVKK+GARGV EVY
Sbjct: 293 DMAMLVNTRGRQRDENDWRQLFMKAGFSDYKVVKKLGARGVFEVY 427
Score = 138 bits (297), Expect = 1e-033
Identities = 70/103 (67%), Positives = 74/103 (71%)
Frame = -2 / -3
Query: 1098 *TSMTPRAPIFLTTL*SEKPALVKMWRQSSSPRCLPLVLTIMSMSISSWASYMTGPMYGP 919
*TS TPRAP FLTTL*S PA +K RQS S R PLV T M+MSI AS + GP GP
Sbjct: 426 *TSKTPRAPNFLTTL*SLNPAFMKS*RQSFSSR*RPLVFTSMAMSIRI*ASNIIGPSEGP 247
Query: 918 RSISMMITFPPSSREGMAFLHSSRILTQSSSLQKCRTSLSMTA 790
ISMMITFPPSSREGMA LH +I TQSSSLQ C TSLS TA
Sbjct: 246 TRISMMITFPPSSREGMALLH*DKIFTQSSSLQWCSTSLSNTA 118
Score = 27.6 bits (54), Expect(2) = 1e-056
Identities = 10/12 (83%), Positives = 11/12 (91%)
Frame = +2 / +3
Query: 707 PDIKCTVLNLPR 742
P IKCTVL+LPR
Sbjct: 6 PHIKCTVLDLPR 41
>gb|CN816101.1|CN816101 HRO4517_A05_A09ZS5 Lib AA071E1X Avena sativa cv. Ogle-C root Avena
sativa cDNA clone HRO4517_A05_A09, mRNA sequence
Length = 652
Score = 203 bits (437), Expect(2) = 1e-056
Identities = 82/107 (76%), Positives = 95/107 (88%)
Frame = +2 / +3
Query: 785 AQAVMLKLVLHFWSDDDCVKILELCRKAIPSREEGGKVIIIEILLGPYMGPVMYEAQLLM 964
+QAVMLKLVLHFWSD+DCVKIL CRKAIPSREEGGKVIIIEI++ P +GP+M+EAQLL
Sbjct: 132 SQAVMLKLVLHFWSDEDCVKILAQCRKAIPSREEGGKVIIIEIVVEPSLGPIMFEAQLLF 311
Query: 965 DMLMMVNTKGRQRGEDDWRHIFTKAGFSDYKVVKKIGARGVIEVYP* 1105
DMLMMVNT+G QR E WR +F +AGF+DYK+VKK+GAR VIEVYP*
Sbjct: 312 DMLMMVNTRGGQRDEKHWRELFMQAGFTDYKIVKKLGARSVIEVYP* 452
Score = 144 bits (310), Expect = 2e-035
Identities = 70/106 (66%), Positives = 78/106 (73%)
Frame = -2 / -1
Query: 1107 AYG*TSMTPRAPIFLTTL*SEKPALVKMWRQSSSPRCLPLVLTIMSMSISSWASYMTGPM 928
+YG*TSMT RAP F T L*S PA + RQ S R PLV TIMS+S SWAS + GP
Sbjct: 454 SYG*TSMTDRAPSFFTIL*SVNPACINSSRQCFSSR*PPLVFTIMSISKRSWASNIIGPK 275
Query: 927 YGPRSISMMITFPPSSREGMAFLHSSRILTQSSSLQKCRTSLSMTA 790
G +ISM+ITFPPSSREGMAFLH +RI TQSSSLQK TSLS+TA
Sbjct: 274 EGSTTISMIITFPPSSREGMAFLHWARIFTQSSSLQK*STSLSITA 137
Score = 32.7 bits (65), Expect(2) = 1e-056
Identities = 11/16 (68%), Positives = 15/16 (93%)
Frame = +2 / +3
Query: 695 VKAFPDIKCTVLNLPR 742
VKA+P +KCTVL+LP+
Sbjct: 12 VKAYPHLKCTVLDLPK 59
>gb|CN815850.1|CN815850 HRO4511_B09_D17ZS5 Lib AA071E1X Avena sativa cv. Ogle-C root Avena
sativa cDNA clone HRO4511_B09_D17, mRNA sequence
Length = 621
Score = 204 bits (441), Expect = 2e-053
Identities = 80/105 (76%), Positives = 95/105 (90%)
Frame = +2 / +2
Query: 785 AQAVMLKLVLHFWSDDDCVKILELCRKAIPSREEGGKVIIIEILLGPYMGPVMYEAQLLM 964
+QAVMLKLVLH WSD+DCVKIL C+ AIPSREEGGKVIII+IL+GP +GP+M+EAQ+LM
Sbjct: 59 SQAVMLKLVLHRWSDEDCVKILSQCKSAIPSREEGGKVIIIDILVGPSLGPIMFEAQVLM 238
Query: 965 DMLMMVNTKGRQRGEDDWRHIFTKAGFSDYKVVKKIGARGVIEVY 1099
DM M+VNT+GRQR E+DWR +F KAGFSDYK+VKK+GARGV EVY
Sbjct: 239 DMAMLVNTRGRQRDENDWRQLFMKAGFSDYKIVKKVGARGVFEVY 373
Score = 150 bits (323), Expect(2) = 8e-038
Identities = 71/103 (68%), Positives = 78/103 (75%)
Frame = -2 / -1
Query: 1098 *TSMTPRAPIFLTTL*SEKPALVKMWRQSSSPRCLPLVLTIMSMSISSWASYMTGPMYGP 919
*TS TPRAP FLT L*S PA +K RQS S R PLVLT M+MSI +WAS + GP GP
Sbjct: 372 *TSKTPRAPTFLTIL*SLNPAFMKS*RQSFSSR*RPLVLTSMAMSIRTWASNIIGPREGP 193
Query: 918 RSISMMITFPPSSREGMAFLHSSRILTQSSSLQKCRTSLSMTA 790
ISMMITFPPSSREGMA LH +I TQSSSLQ+C TSLS+TA
Sbjct: 192 TRISMMITFPPSSREGMALLH*DKIFTQSSSLQRCSTSLSITA 64
Score = 22.1 bits (42), Expect(2) = 8e-038
Identities = 6/14 (42%), Positives = 11/14 (78%)
Frame = -1 / -3
Query: 736 KVEHGALDVWEGLD 695
K+EH L +W+G++
Sbjct: 82 KLEHHGLRLWDGVE 41
>gb|CN814789.1|CN814789 HRO4502_E05_I10ZS5 Lib AA071E1X Avena sativa cv. Ogle-C root Avena
sativa cDNA clone HRO4502_E05_I10, mRNA sequence
Length = 596
Score = 204 bits (439), Expect = 4e-053
Identities = 79/105 (75%), Positives = 95/105 (90%)
Frame = +2 / -3
Query: 785 AQAVMLKLVLHFWSDDDCVKILELCRKAIPSREEGGKVIIIEILLGPYMGPVMYEAQLLM 964
+QAV+LKLVLH WSD+DCVKIL CR AIPSRE+GGKVIII+IL+GP +GP+M+EAQ+LM
Sbjct: 579 SQAVLLKLVLHHWSDEDCVKILSQCRNAIPSREKGGKVIIIDILVGPSLGPIMFEAQILM 400
Query: 965 DMLMMVNTKGRQRGEDDWRHIFTKAGFSDYKVVKKIGARGVIEVY 1099
DM M+VNT+GRQR E+DWR +F KAGFSDYK+VKK+GARGV EVY
Sbjct: 399 DMAMLVNTRGRQRDENDWRQLFMKAGFSDYKIVKKLGARGVFEVY 265
Score = 133 bits (284), Expect = 9e-032
Identities = 67/103 (65%), Positives = 73/103 (70%)
Frame = -2 / +2
Query: 1098 *TSMTPRAPIFLTTL*SEKPALVKMWRQSSSPRCLPLVLTIMSMSISSWASYMTGPMYGP 919
*TS TPRAP FLT L*S PA +K RQS S R PLV T M+MSI AS + GP GP
Sbjct: 266 *TSKTPRAPNFLTIL*SLNPAFMKS*RQSFSSR*RPLVFTSMAMSIRI*ASNIIGPSEGP 445
Query: 918 RSISMMITFPPSSREGMAFLHSSRILTQSSSLQKCRTSLSMTA 790
+SMMITFPP SREG+AFLH +I TQSSSLQ C TSLS TA
Sbjct: 446 TRMSMMITFPPFSREGIAFLH*DKIFTQSSSLQWCSTSLSNTA 574
>gb|CN821053.1|CN821053 HRO4427_A04_B07ZS5 Lib AA069E1X Avena sativa cv. Ogle-C etiolated
leaf Avena sativa cDNA clone HRO4427_A04_B07, mRNA
sequence
Length = 644
Score = 204 bits (439), Expect = 4e-053
Identities = 79/105 (75%), Positives = 95/105 (90%)
Frame = +2 / +3
Query: 785 AQAVMLKLVLHFWSDDDCVKILELCRKAIPSREEGGKVIIIEILLGPYMGPVMYEAQLLM 964
+QAV+LKLVLH WSD+DCVKIL CR AIPSRE+GGKVIII+IL+GP +GP+M+EAQ+LM
Sbjct: 81 SQAVLLKLVLHHWSDEDCVKILSQCRNAIPSREKGGKVIIIDILVGPSLGPIMFEAQILM 260
Query: 965 DMLMMVNTKGRQRGEDDWRHIFTKAGFSDYKVVKKIGARGVIEVY 1099
DM M+VNT+GRQR E+DWR +F KAGFSDYK+VKK+GARGV EVY
Sbjct: 261 DMAMLVNTRGRQRDENDWRQLFMKAGFSDYKIVKKLGARGVFEVY 395
Score = 133 bits (284), Expect = 9e-032
Identities = 67/103 (65%), Positives = 73/103 (70%)
Frame = -2 / -2
Query: 1098 *TSMTPRAPIFLTTL*SEKPALVKMWRQSSSPRCLPLVLTIMSMSISSWASYMTGPMYGP 919
*TS TPRAP FLT L*S PA +K RQS S R PLV T M+MSI AS + GP GP
Sbjct: 394 *TSKTPRAPNFLTIL*SLNPAFMKS*RQSFSSR*RPLVFTSMAMSIRI*ASNIIGPSEGP 215
Query: 918 RSISMMITFPPSSREGMAFLHSSRILTQSSSLQKCRTSLSMTA 790
+SMMITFPP SREG+AFLH +I TQSSSLQ C TSLS TA
Sbjct: 214 TRMSMMITFPPFSREGIAFLH*DKIFTQSSSLQWCSTSLSNTA 86
>gb|CN816425.1|CN816425 HRO4520_F02_L04ZS5 Lib AA071E1X Avena sativa cv. Ogle-C root Avena
sativa cDNA clone HRO4520_F02_L04, mRNA sequence
Length = 538
Score = 183 bits (395), Expect = 4e-047
Identities = 70/93 (75%), Positives = 84/93 (90%)
Frame = +2 / +1
Query: 821 WSDDDCVKILELCRKAIPSREEGGKVIIIEILLGPYMGPVMYEAQLLMDMLMMVNTKGRQ 1000
WSD+DCVKIL CR AIPSRE+GGKVIII+IL+GP +GP+M+EAQ+LMDM M+VNT+GRQ
Sbjct: 13 WSDEDCVKILSQCRNAIPSREKGGKVIIIDILVGPSLGPIMFEAQILMDMAMLVNTRGRQ 192
Query: 1001 RGEDDWRHIFTKAGFSDYKVVKKIGARGVIEVY 1099
R E+DWR +F KAGFSDYK+VKK+GARGV EVY
Sbjct: 193 RDENDWRQLFMKAGFSDYKIVKKLGARGVFEVY 291
Score = 117 bits (250), Expect = 4e-027
Identities = 59/92 (64%), Positives = 65/92 (70%)
Frame = -2 / -3
Query: 1098 *TSMTPRAPIFLTTL*SEKPALVKMWRQSSSPRCLPLVLTIMSMSISSWASYMTGPMYGP 919
*TS TPRAP FLT L*S PA +K RQS S R PLV T M+MSI AS + GP GP
Sbjct: 290 *TSKTPRAPNFLTIL*SLNPAFMKS*RQSFSSR*RPLVFTSMAMSIRI*ASNIIGPSEGP 111
Query: 918 RSISMMITFPPSSREGMAFLHSSRILTQSSSL 823
+SMMITFPP SREG+AFLH +I TQSSSL
Sbjct: 110 TRMSMMITFPPFSREGIAFLH*DKIFTQSSSL 15
>gb|CN814955.1|CN814955 HRO4504_C09_F18ZS5 Lib AA071E1X Avena sativa cv. Ogle-C root Avena
sativa cDNA clone HRO4504_C09_F18, mRNA sequence
Length = 648
Score = 95.0 bits (201), Expect(2) = 8e-042
Identities = 39/54 (72%), Positives = 44/54 (81%)
Frame = +2 / +1
Query: 944 YEAQLLMDMLMMVNTKGRQRGEDDWRHIFTKAGFSDYKVVKKIGARGVIEVYP* 1105
+EA+LLMD+ MMV T GRQR E DW IFTKAGFS Y +VKK+GARGV EVYP*
Sbjct: 214 HEAELLMDVAMMVFTNGRQRDESDWGDIFTKAGFSGYNIVKKLGARGVFEVYP* 375
Score = 91.3 bits (193), Expect(2) = 8e-042
Identities = 35/51 (68%), Positives = 44/51 (86%)
Frame = +2 / +1
Query: 785 AQAVMLKLVLHFWSDDDCVKILELCRKAIPSREEGGKVIIIEILLGPYMGP 937
AQAV++KLVLH WSD+DCVKIL C+KA+PSREEGGKVI+I+I++ GP
Sbjct: 58 AQAVLVKLVLHHWSDEDCVKILAQCKKAVPSREEGGKVIVIDIVVDSSSGP 210
Score = 73.9 bits (155), Expect(2) = 8e-029
Identities = 33/49 (67%), Positives = 38/49 (77%)
Frame = -2 / -2
Query: 936 GPMYGPRSISMMITFPPSSREGMAFLHSSRILTQSSSLQKCRTSLSMTA 790
GP ++SM ITFPPSSR+G AFLH +RI TQSSSLQ CRTSL+ TA
Sbjct: 209 GPEEESTTMSMTITFPPSSRDGTAFLH*ARIFTQSSSLQWCRTSLTNTA 63
Score = 68.9 bits (144), Expect(2) = 8e-029
Identities = 35/55 (63%), Positives = 38/55 (69%)
Frame = -2 / -2
Query: 1110 LAYG*TSMTPRAPIFLTTL*SEKPALVKMWRQSSSPRCLPLVLTIMSMSISSWAS 946
L++G TS TPRAP F T L* PALVKM QS S RC PLV TIM+ SI S AS
Sbjct: 380 LSHGYTSKTPRAPSFFTML*PLNPALVKMSPQSDSSRCRPLVNTIMATSIRSSAS 216
>gb|CN820644.1|CN820644 HRO4415_G07_N13ZS5 Lib AA069E1X Avena sativa cv. Ogle-C etiolated
leaf Avena sativa cDNA clone HRO4415_G07_N13, mRNA
sequence
Length = 614
Score = 77.1 bits (162), Expect(2) = 2e-028
Identities = 33/47 (70%), Positives = 38/47 (80%)
Frame = -2 / -3
Query: 936 GPMYGPRSISMMITFPPSSREGMAFLHSSRILTQSSSLQKCRTSLSM 796
GP G S+SM ITFPPSSR+GMAFLH +RI TQSSSLQ C TSL++
Sbjct: 147 GPEEGSTSMSMTITFPPSSRDGMAFLH*ARIFTQSSSLQWCNTSLTL 7
Score = 64.3 bits (134), Expect(2) = 2e-028
Identities = 32/54 (59%), Positives = 36/54 (66%)
Frame = -2 / -3
Query: 1107 AYG*TSMTPRAPIFLTTL*SEKPALVKMWRQSSSPRCLPLVLTIMSMSISSWAS 946
++G TS TPRAP F T L* PALVK+ QS S RC PLV TIM+ S S AS
Sbjct: 315 SHGYTSKTPRAPSFFTML*PVNPALVKISAQSDSSRCRPLVKTIMATSTRSSAS 154
>gb|CN814894.1|CN814894 HRO4503_F08_L15ZS5 Lib AA071E1X Avena sativa cv. Ogle-C root Avena
sativa cDNA clone HRO4503_F08_L15, mRNA sequence
Length = 567
Score = 109 bits (232), Expect = 1e-024
Identities = 45/76 (59%), Positives = 58/76 (76%)
Frame = +2 / +3
Query: 905 IEILLGPYMGPVMYEAQLLMDMLMMVNTKGRQRGEDDWRHIFTKAGFSDYKVVKKIGARG 1084
I+I++ P M E QLLMD+LM+ T+GRQR E+DW IFTKAGFSDYK++K +GARG
Sbjct: 12 IDIVVDPSSSGPMLETQLLMDVLMLTCTRGRQRDENDWSSIFTKAGFSDYKIIKMLGARG 191
Query: 1085 VIEVYP*ASCCMIDVM 1132
VIEVYP* + M+ +M
Sbjct: 192 VIEVYP*GAPPMLSLM 239
>gb|CN816150.1|CN816150 HRO4517_E08_I15ZS5 Lib AA071E1X Avena sativa cv. Ogle-C root Avena
sativa cDNA clone HRO4517_E08_I15, mRNA sequence
Length = 455
Score = 107 bits (228), Expect = 5e-024
Identities = 44/75 (58%), Positives = 57/75 (76%)
Frame = +2 / +1
Query: 908 EILLGPYMGPVMYEAQLLMDMLMMVNTKGRQRGEDDWRHIFTKAGFSDYKVVKKIGARGV 1087
+I++ P M E QLLMD+LM+ T+GRQR E+DW IFTKAGF+DYK++KK+GARGV
Sbjct: 1 DIVVDPSSSGPMLETQLLMDVLMLTCTRGRQRDENDWSSIFTKAGFNDYKIIKKLGARGV 180
Query: 1088 IEVYP*ASCCMIDVM 1132
IEVYP* M+ +M
Sbjct: 181 IEVYP*GVPHMLSLM 225
>gb|CN814875.1|CN814875 HRO4503_D10_H19ZS5 Lib AA071E1X Avena sativa cv. Ogle-C root Avena
sativa cDNA clone HRO4503_D10_H19, mRNA sequence
Length = 846
Score = 105 bits (223), Expect = 2e-023
Identities = 41/93 (44%), Positives = 66/93 (70%)
Frame = +2 / +1
Query: 827 DDDCVKILELCRKAIPSREEGGKVIIIEILLGPYMGPVMYEAQLLMDMLMMVNTKGRQRG 1006
D+DCVKIL+ C++AIPSR+ GGKVII+++++G ++ + L ++ +G +R
Sbjct: 13 DEDCVKILKKCKEAIPSRDAGGKVIIVDMVVGSGPNDIVTRETQVFFDLFIMYLEGIERE 192
Query: 1007 EDDWRHIFTKAGFSDYKVVKKIGARGVIEVYP* 1105
E +W+ IF +AGFS+YK++ +G R VIE+YP*
Sbjct: 193 EFEWKKIFMEAGFSEYKIISVLGVRSVIELYP* 291
Database: Avena_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:15 PM
Number of letters in database: 4,702,463
Number of sequences in database: 8143
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 12,882,798
Number of Sequences: 8143
Number of extensions: 180347
Number of successful extensions: 1445
Number of sequences better than 1.0e-020: 13
length of database: 1,567,487
effective HSP length: 44
effective length of database: 1,209,195
effective search space used: 480050415
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)