TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2448339.2.1
(931 letters)
Database: Avena_nucl_with_EST.fasta
8143 sequences; 4,702,463 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CN821289.1|CN821289 HRO4423_F05_L09ZS5 Lib AA069E1X Aven... 340 2e-094
gb|CN819537.1|CN819537 HRO4401_C11_E21ZS5 Lib AA069E1X Aven... 286 4e-078
gb|CN821194.1|CN821194 HRO4428_E09_J18ZS5 Lib AA069E1X Aven... 263 5e-074
gb|CN814731.1|CN814731 HRO4501_H05_O09ZS5 Lib AA071E1X Aven... 242 9e-065
gb|CN816965.1|CN816965 HRO4526_G07_M14ZS5 Lib AA071E1X Aven... 232 3e-064
gb|CN814992.1|CN814992 HRO4504_F10_L20ZS5 Lib AA071E1X Aven... 204 3e-056
gb|CN820019.1|CN820019 HRO4410_B08_C16ZS5 Lib AA069E1X Aven... 203 5e-053
gb|CN820188.1|CN820188 HRO4412_B09_D18ZS5 Lib AA069E1X Aven... 203 5e-053
gb|CN816098.1|CN816098 HRO4517_A02_A03ZS5 Lib AA071E1X Aven... 173 4e-044
gb|CN814688.1|CN814688 HRO4501_D09_G17ZS5 Lib AA071E1X Aven... 171 2e-043
gb|CN815364.1|CN815364 HRO4508_H03_P06ZS5 Lib AA071E1X Aven... 161 3e-041
gb|CN817480.1|CN817480 HRO4466_C01_F02ZS5 Lib AA070E1X Aven... 153 4e-038
gb|CN816654.1|CN816654 HRO4523_C06_F11ZS5 Lib AA071E1X Aven... 141 2e-034
gb|CN815849.1|CN815849 HRO4511_B08_D15ZS5 Lib AA071E1X Aven... 138 2e-033
gb|CN821493.1|CN821493 HRO4425_H11_O21ZS5 Lib AA069E1X Aven... 123 1e-032
gb|CN820944.1|CN820944 HRO4421_G05_M09ZS5 Lib AA069E1X Aven... 133 6e-032
gb|CN814697.1|CN814697 HRO4501_E06_I11ZS5 Lib AA071E1X Aven... 124 2e-029
gb|CN815167.1|CN815167 HRO4506_F04_K08ZS5 Lib AA071E1X Aven... 120 3e-028
gb|CN820524.1|CN820524 HRO4413_D03_G05ZS5 Lib AA069E1X Aven... 108 2e-024
gb|CN817131.1|CN817131 HRO4528_E12_J24ZS5 Lib AA071E1X Aven... 75 4e-024
gb|CN816956.1|CN816956 HRO4526_F10_K20ZS5 Lib AA071E1X Aven... 102 7e-023
gb|CN818122.1|CN818122 HRO4471_F01_K01ZS5 Lib AA070E1X Aven... 97 5e-021
>gb|CN821289.1|CN821289 HRO4423_F05_L09ZS5 Lib AA069E1X Avena sativa cv. Ogle-C etiolated
leaf Avena sativa cDNA clone HRO4423_F05_L09, mRNA
sequence
Length = 648
Score = 340 bits (737), Expect = 2e-094
Identities = 133/143 (93%), Positives = 139/143 (97%)
Frame = +2 / -2
Query: 158 LKELKDLQKDPPTSCSAGPVGEDMFHWQATIMGPSDSPFAGGVFLVNIHFPPDYPFKPPK 337
LKELKDLQ+DPPTSCSAGPV EDMFHWQATIMGPSDSP++GGVFLV IHFPPDYPFKPPK
Sbjct: 647 LKELKDLQRDPPTSCSAGPVAEDMFHWQATIMGPSDSPYSGGVFLVTIHFPPDYPFKPPK 468
Query: 338 VSFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHM 517
V+F+TKVFHPN+NSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHM
Sbjct: 467 VAFKTKVFHPNVNSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHM 288
Query: 518 YKTDRAKYESTARSWTQKYAMG* 586
YK DR KYESTARSWTQKYAMG*
Sbjct: 287 YKADRTKYESTARSWTQKYAMG* 219
Score = 141 bits (302), Expect(2) = 3e-053
Identities = 63/83 (75%), Positives = 66/83 (79%)
Frame = -2 / +1
Query: 585 *PMAYFCVQERAVDSYLALSVLYM*AISGTRGSSGFGSVSSEQIDRRTFEIVKAGLHCSL 406
*PMAYF VQ AVDSY S LYM*AISGT GSSGFGSVS EQI+R TFEIV AGLHCS
Sbjct: 220 *PMAYFWVQLLAVDSYFVRSALYM*AISGTSGSSGFGSVSREQIERSTFEIVSAGLHCSF 399
Query: 405 RMSRQMLPLLLMFGWKTLVRKDT 337
++SRQMLPLLL FGW T V K T
Sbjct: 400 KISRQMLPLLLTFGWNTFVLKAT 468
Score = 127 bits (271), Expect = 4e-030
Identities = 63/130 (48%), Positives = 82/130 (63%)
Frame = +1 / -1
Query: 196 LLQRRSCW*GHVPLASDHHGAFGQPICRWGILGEHSLPTGLPFQATKGVFPHQGFPPEHQ 375
LLQR +C * +V LA + +G+ QP+ +LG +S +GLP Q T G F ++G P +
Sbjct: 609 LLQRGACR*RYVSLAGNDYGSVRQPLQWRCLLGYNSFSSGLPVQTT*GRFQNKGVPSKR* 430
Query: 376 QQRQHLP*HS*GTVEPCFNYLKGSPVNLLTAHGPKP**SSCP*DCSHVQDRQGQV*VHRT 555
QQ QHLP*+ G VE C + LKG+P+NLL GPKP S+ DCSHVQ +V V+R
Sbjct: 429 QQWQHLP*YLEGAVESCTDNLKGAPLNLLPTDGPKPRRSTGSGDCSHVQSGSNKVRVYRE 250
Query: 556 LLDTEVCHGL 585
LD EV HGL
Sbjct: 249 ELDPEVRHGL 220
Score = 101 bits (215), Expect = 2e-022
Identities = 53/125 (42%), Positives = 74/125 (59%)
Frame = -1 / +3
Query: 562 PGACGGLILGPVGLVHVSNLRDKRIIRVWVREQ*AD*QENL*DS*SRAPLFLXXXXXXXX 383
P G L+L + VHVSNLR++ I+ VWVR+ AD*+E+L*D R PL L
Sbjct: 243 PAPRGRLVLCSIRFVHVSNLRNQWIVGVWVRQ*GAD*EEHL*DCQCRTPLLLQDIKADAA 422
Query: 382 XXXXVRVENLGAERHLWWLERVIRWEVNVHQEYPTCKWAVRRPHDGRLPMEHVLTNRTCA 203
V +E+L E L W ERV+R ++N +QE + AV R H+ LP++H+ ++R A
Sbjct: 423 IAVNVWMEHLCFESDLRWFERVVRRKMNCNQEDTSTVRAV*RTHNRCLPVKHIFSDRPRA 602
Query: 202 AGGGR 188
AGG R
Sbjct: 603 AGGRR 617
Score = 82.6 bits (174), Expect(2) = 3e-053
Identities = 33/46 (71%), Positives = 39/46 (84%)
Frame = -2 / +1
Query: 294 TKNTPPANGLSEGPMMVACQWNMSSPTGPALQEVGGSFCRSFNSFR 157
TK TPP GLS+GP++VACQ N+SS TGPALQEVGGS CRS +SF+
Sbjct: 511 TKKTPPL*GLSDGPIIVACQ*NISSATGPALQEVGGSLCRSLSSFK 648
>gb|CN819537.1|CN819537 HRO4401_C11_E21ZS5 Lib AA069E1X Avena sativa cv. Ogle-C etiolated
leaf Avena sativa cDNA clone HRO4401_C11_E21, mRNA
sequence
Length = 657
Score = 286 bits (619), Expect = 4e-078
Identities = 112/120 (93%), Positives = 117/120 (97%)
Frame = +2 / +3
Query: 230 FHWQATIMGPSDSPFAGGVFLVNIHFPPDYPFKPPKVSFRTKVFHPNINSNGSICLDILK 409
FHW TIMGP DSP+AGGVFLVNIHFPPDYPFKPPKVSF+TKVFHPNINSNGSICLDILK
Sbjct: 12 FHWLPTIMGPPDSPYAGGVFLVNIHFPPDYPFKPPKVSFKTKVFHPNINSNGSICLDILK 191
Query: 410 EQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRAKYESTARSWTQKYAMG*K 589
EQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDR+KYE+TARSWTQKYAMG*+
Sbjct: 192 EQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRSKYETTARSWTQKYAMG*R 371
Score = 148 bits (318), Expect(2) = 4e-044
Identities = 65/83 (78%), Positives = 68/83 (81%)
Frame = -2 / -3
Query: 582 PMAYFCVQERAVDSYLALSVLYM*AISGTRGSSGFGSVSSEQIDRRTFEIVKAGLHCSLR 403
PMAYFCVQ RAV SY SVLYM AISGTRGSSG GSVS EQI+ T EIVKAGLHCSLR
Sbjct: 364 PMAYFCVQLRAVVSYFDRSVLYMWAISGTRGSSGLGSVSREQIESNTLEIVKAGLHCSLR 185
Query: 402 MSRQMLPLLLMFGWKTLVRKDTF 334
+SR MLPLLL+ GWKT V KDTF
Sbjct: 184 ISRHMLPLLLILGWKTFVLKDTF 116
Score = 123 bits (264), Expect = 3e-029
Identities = 57/120 (47%), Positives = 75/120 (62%)
Frame = +1 / +2
Query: 229 VPLASDHHGAFGQPICRWGILGEHSLPTGLPFQATKGVFPHQGFPPEHQQQRQHLP*HS* 408
VPLAS+ +G Q +CR L EHS +GLP Q +G+F +G P +QQQ +H+P*+S*
Sbjct: 11 VPLASNDYGTP*QSLCRRRFLSEHSFSSGLPLQTPEGIFQDKGLPS*YQQQWKHMP*YS* 190
Query: 409 GTVEPCFNYLKGSPVNLLTAHGPKP**SSCP*DCSHVQDRQGQV*VHRTLLDTEVCHGLE 588
G VEPCF+ L+G + L A +P CP*DC HVQD +V + LD EV HGL+
Sbjct: 191 GAVEPCFDDLQGIALYLFPADRSQPGRPPCP*DCPHVQDGPVKVRDNSPQLDAEVRHGLK 370
Score = 45.1 bits (92), Expect(2) = 4e-044
Identities = 17/24 (70%), Positives = 19/24 (79%)
Frame = -2 / -3
Query: 300 MFTKNTPPANGLSEGPMMVACQWN 229
MFTK TPPA GLS GP++V QWN
Sbjct: 82 MFTKKTPPA*GLSGGPIIVGSQWN 11
>gb|CN821194.1|CN821194 HRO4428_E09_J18ZS5 Lib AA069E1X Avena sativa cv. Ogle-C etiolated
leaf Avena sativa cDNA clone HRO4428_E09_J18, mRNA
sequence
Length = 592
Score = 263 bits (568), Expect(3) = 5e-074
Identities = 105/107 (98%), Positives = 106/107 (99%)
Frame = +2 / +2
Query: 266 SPFAGGVFLVNIHFPPDYPFKPPKVSFRTKVFHPNINSNGSICLDILKEQWSPALTISKV 445
SPF GG+FLVNIHFPPDYPFKPPKVSFRTKVFHPNINSNGSICLDILKEQWSPALTISKV
Sbjct: 11 SPFTGGLFLVNIHFPPDYPFKPPKVSFRTKVFHPNINSNGSICLDILKEQWSPALTISKV 190
Query: 446 LLSICSLLTDPNPDDPLVPEIAHMYKTDRAKYESTARSWTQKYAMG* 586
LLSICSLLTDPNPDDPLVPEIAHMYKTDRAKYESTARSWTQKYAMG*
Sbjct: 191 LLSICSLLTDPNPDDPLVPEIAHMYKTDRAKYESTARSWTQKYAMG* 331
Score = 182 bits (392), Expect(2) = 2e-049
Identities = 77/84 (91%), Positives = 82/84 (97%)
Frame = -2 / -2
Query: 585 *PMAYFCVQERAVDSYLALSVLYM*AISGTRGSSGFGSVSSEQIDRRTFEIVKAGLHCSL 406
*PMAYFCVQERAVDSYLALSVLYM AISGT GSSGFGSVS+EQIDRRTF++V+AGLHCSL
Sbjct: 330 *PMAYFCVQERAVDSYLALSVLYMWAISGTSGSSGFGSVSNEQIDRRTFDMVRAGLHCSL 151
Query: 405 RMSRQMLPLLLMFGWKTLVRKDTF 334
RMSRQMLPLLLMFGWKTLVRK+TF
Sbjct: 150 RMSRQMLPLLLMFGWKTLVRKETF 79
Score = 165 bits (355), Expect = 9e-042
Identities = 73/108 (67%), Positives = 82/108 (75%)
Frame = +1 / +1
Query: 265 QPICRWGILGEHSLPTGLPFQATKGVFPHQGFPPEHQQQRQHLP*HS*GTVEPCFNYLKG 444
+PI W ILGEHS T L FQAT+G+FPHQG PPEHQQQRQHLP*HS G VEP +++KG
Sbjct: 10 EPIHWWSILGEHSFSTRLSFQATEGLFPHQGLPPEHQQQRQHLP*HSQGAVEPGSDHIKG 189
Query: 445 SPVNLLTAHGPKP**SSCP*DCSHVQDRQGQV*VHRTLLDTEVCHGLE 588
PVNLL A GP+P** + *D HVQD GQV VH +LLD EV HGLE
Sbjct: 190 PPVNLLVADGPEP**PAGA*DRPHVQD**GQVRVHCSLLDAEVRHGLE 333
Score = 155 bits (334), Expect = 7e-039
Identities = 68/107 (63%), Positives = 74/107 (69%)
Frame = -3 / -3
Query: 587 SSPWHTSVSRSVRWTHTWPCRSCTCEQSQGQEDHQGLGP*AVSRLTGEPLR*LKQGSTVP 408
SSPW TS SRS +WT TWP +SCTC +SQ HQG GP A SRLTG PL + GST P
Sbjct: 332 SSPWRTSASRSEQWTRTWPYQSCTCGRSQAPAGHQGSGPSATSRLTGGPLIWSEPGSTAP 153
Query: 407 *ECQGKXXXXXXCSGGKPWCGKTPLVA*KGNPVGSECSPRIPHLQMG 267
*ECQGK CSGG+PWCGK P VA*K N V +ECSPRI H MG
Sbjct: 152 *ECQGKCCRCC*CSGGRPWCGKRPSVA*KDNLVENECSPRIDHQ*MG 12
Score = 128 bits (275), Expect = 1e-030
Identities = 59/101 (58%), Positives = 71/101 (70%)
Frame = -1 / -1
Query: 562 PGACGGLILGPVGLVHVSNLRDKRIIRVWVREQ*AD*QENL*DS*SRAPLFLXXXXXXXX 383
PGA GL+LGP+ LVHV +LR +R+IRV VR+Q AD*QE+L* SRAPL L
Sbjct: 307 PGASSGLVLGPISLVHVGDLRHQRVIRVRVRQQRAD*QEDL*YGQSRAPLLLENVKANAA 128
Query: 382 XXXXVRVENLGAERHLWWLERVIRWEVNVHQEYPTCKWAVR 260
VRVE+LGAER L WLER+I W++NVHQE T +WA R
Sbjct: 127 VAVDVRVEDLGAERDLRWLERIIWWKMNVHQE*TTSEWAPR 5
Score = 28.6 bits (56), Expect(2) = 2e-049
Identities = 10/12 (83%), Positives = 10/12 (83%)
Frame = -2 / -2
Query: 300 MFTKNTPPANGL 265
MFTKN PP NGL
Sbjct: 45 MFTKNRPPVNGL 10
Score = 24.9 bits (48), Expect(3) = 5e-074
Identities = 8/10 (80%), Positives = 9/10 (90%)
Frame = +1 / +3
Query: 712 VLPCEVRCVW 741
+LPCEVR VW
Sbjct: 495 LLPCEVRWVW 524
Score = 24.4 bits (47), Expect(3) = 5e-074
Identities = 8/12 (66%), Positives = 10/12 (83%)
Frame = +3 / +2
Query: 627 TPNRYHLNNQSS 662
T NRYHLNN ++
Sbjct: 383 TKNRYHLNNPAN 418
>gb|CN814731.1|CN814731 HRO4501_H05_O09ZS5 Lib AA071E1X Avena sativa cv. Ogle-C root Avena
sativa cDNA clone HRO4501_H05_O09, mRNA sequence
Length = 624
Score = 242 bits (522), Expect = 9e-065
Identities = 94/111 (84%), Positives = 101/111 (90%)
Frame = +2 / +2
Query: 254 GPSDSPFAGGVFLVNIHFPPDYPFKPPKVSFRTKVFHPNINSNGSICLDILKEQWSPALT 433
G DSP+AGG+F VNIHFPPDYPFKPPKV+F TKV+HPNINSNGSICLDILKEQWSPALT
Sbjct: 2 GTRDSPYAGGIFFVNIHFPPDYPFKPPKVNFETKVYHPNINSNGSICLDILKEQWSPALT 181
Query: 434 ISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRAKYESTARSWTQKYAMG* 586
ISKVLLSI SLLTDPNPDDPLVPEIAH+YK R +YE TA +WTQKYAMG*
Sbjct: 182 ISKVLLSISSLLTDPNPDDPLVPEIAHLYKNQRTRYEETASAWTQKYAMG* 334
Score = 123 bits (263), Expect = 5e-029
Identities = 64/110 (58%), Positives = 69/110 (62%)
Frame = -2 / -1
Query: 582 PMAYFCVQERAVDSYLALSVLYM*AISGTRGSSGFGSVSSEQIDRRTFEIVKAGLHCSLR 403
PMAYF VQ AV S L L AISGTRGSSG GSV E ++RRT ++V+AGLHCSLR
Sbjct: 330 PMAYFWVQALAVSS*RVLWFL*RCAISGTRGSSGLGSVRRELMERRTLDMVRAGLHCSLR 151
Query: 402 MSRQMLPLLLMFGWKTLVRKDTFXXXXXXXXXX*MFTKNTPPANGLSEGP 253
MSRQMLPL LMFG T V K T M TK PPA GLS P
Sbjct: 150 MSRQMLPLELMFG*YTFVSKFTLGGLKG*SGGKWMLTKKIPPA*GLSLVP 1
>gb|CN816965.1|CN816965 HRO4526_G07_M14ZS5 Lib AA071E1X Avena sativa cv. Ogle-C root Avena
sativa cDNA clone HRO4526_G07_M14, mRNA sequence
Length = 532
Score = 232 bits (500), Expect(3) = 3e-064
Identities = 93/93 (100%), Positives = 93/93 (100%)
Frame = +2 / +1
Query: 308 PPDYPFKPPKVSFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPD 487
PPDYPFKPPKVSFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPD
Sbjct: 13 PPDYPFKPPKVSFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPD 192
Query: 488 DPLVPEIAHMYKTDRAKYESTARSWTQKYAMG* 586
DPLVPEIAHMYKTDRAKYESTARSWTQKYAMG*
Sbjct: 193 DPLVPEIAHMYKTDRAKYESTARSWTQKYAMG* 291
Score = 185 bits (398), Expect = 1e-047
Identities = 78/84 (92%), Positives = 83/84 (98%)
Frame = -2 / -3
Query: 585 *PMAYFCVQERAVDSYLALSVLYM*AISGTRGSSGFGSVSSEQIDRRTFEIVKAGLHCSL 406
*PMAYFCVQERAVDSYLALSVLYM AISGTRGSSGFGSVS+EQIDRRTF++V+AGLHCSL
Sbjct: 290 *PMAYFCVQERAVDSYLALSVLYMWAISGTRGSSGFGSVSNEQIDRRTFDMVRAGLHCSL 111
Query: 405 RMSRQMLPLLLMFGWKTLVRKDTF 334
RMSRQMLPLLLMFGWKTLVRK+TF
Sbjct: 110 RMSRQMLPLLLMFGWKTLVRKETF 39
Score = 150 bits (322), Expect = 3e-037
Identities = 66/93 (70%), Positives = 73/93 (78%)
Frame = +1 / +3
Query: 310 TGLPFQATKGVFPHQGFPPEHQQQRQHLP*HS*GTVEPCFNYLKGSPVNLLTAHGPKP** 489
T L FQAT+G+FPHQG PPEHQQQRQHLP*HS G VEP +++KG PVNLL A GP+P**
Sbjct: 15 TRLSFQATEGLFPHQGLPPEHQQQRQHLP*HSQGAVEPGSDHIKGPPVNLLVADGPEP** 194
Query: 490 SSCP*DCSHVQDRQGQV*VHRTLLDTEVCHGLE 588
S *D HVQD GQV VH +LLD EVCHGLE
Sbjct: 195 PSGA*DRPHVQD**GQVRVHCSLLDAEVCHGLE 293
Score = 141 bits (303), Expect = 1e-034
Identities = 61/93 (65%), Positives = 66/93 (70%)
Frame = -3 / -1
Query: 587 SSPWHTSVSRSVRWTHTWPCRSCTCEQSQGQEDHQGLGP*AVSRLTGEPLR*LKQGSTVP 408
SSPWHTS SRS +WT TWP +SCTC +SQ E HQG GP A SRLTG PL + GST P
Sbjct: 292 SSPWHTSASRSEQWTRTWPYQSCTCGRSQAPEGHQGSGPSATSRLTGGPLIWSEPGSTAP 113
Query: 407 *ECQGKXXXXXXCSGGKPWCGKTPLVA*KGNPV 309
*ECQGK CSGG+PWCGK P VA*K N V
Sbjct: 112 *ECQGKCCRCC*CSGGRPWCGKRPSVA*KDNLV 14
Score = 107 bits (228), Expect(2) = 3e-024
Identities = 50/87 (57%), Positives = 60/87 (68%)
Frame = -1 / -2
Query: 562 PGACGGLILGPVGLVHVSNLRDKRIIRVWVREQ*AD*QENL*DS*SRAPLFLXXXXXXXX 383
PGA GL+LGP+ LVHV +LR +R+IRV VR+Q AD*QE+L* SRAPL L
Sbjct: 267 PGASSGLVLGPISLVHVGDLRHQRVIRVRVRQQRAD*QEDL*YGQSRAPLLLENVKANAA 88
Query: 382 XXXXVRVENLGAERHLWWLERVIRWEV 302
VRVE+LGAER L WLER+I W +
Sbjct: 87 VAVDVRVEDLGAERDLRWLERIIWWNL 7
Score = 25.4 bits (49), Expect(3) = 3e-064
Identities = 8/10 (80%), Positives = 9/10 (90%)
Frame = +1 / +3
Query: 712 VLPCEVRCVW 741
+LPCEVR VW
Sbjct: 450 LLPCEVRSVW 479
Score = 22.1 bits (42), Expect(3) = 3e-064
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = +3 / +1
Query: 633 NRYHLNN 653
NRYHLNN
Sbjct: 346 NRYHLNN 366
Score = 21.7 bits (41), Expect(2) = 3e-024
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = -2 / -1
Query: 654 GYLGDND 634
GYLGDND
Sbjct: 367 GYLGDND 347
>gb|CN814992.1|CN814992 HRO4504_F10_L20ZS5 Lib AA071E1X Avena sativa cv. Ogle-C root Avena
sativa cDNA clone HRO4504_F10_L20, mRNA sequence
Length = 508
Score = 204 bits (441), Expect(3) = 3e-056
Identities = 84/84 (100%), Positives = 84/84 (100%)
Frame = +2 / +2
Query: 335 KVSFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAH 514
KVSFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAH
Sbjct: 2 KVSFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAH 181
Query: 515 MYKTDRAKYESTARSWTQKYAMG* 586
MYKTDRAKYESTARSWTQKYAMG*
Sbjct: 182 MYKTDRAKYESTARSWTQKYAMG* 253
Score = 182 bits (393), Expect = 5e-047
Identities = 77/84 (91%), Positives = 82/84 (97%)
Frame = -2 / -2
Query: 585 *PMAYFCVQERAVDSYLALSVLYM*AISGTRGSSGFGSVSSEQIDRRTFEIVKAGLHCSL 406
*PMAYFCVQERAVDSYLALSVLYM AISGTRGSSGFGSVS+EQIDRRTF++V+AGLHCSL
Sbjct: 252 *PMAYFCVQERAVDSYLALSVLYMWAISGTRGSSGFGSVSNEQIDRRTFDMVRAGLHCSL 73
Query: 405 RMSRQMLPLLLMFGWKTLVRKDTF 334
RMSRQMLPLLLMFGWKTLVR +TF
Sbjct: 72 RMSRQMLPLLLMFGWKTLVRNETF 1
Score = 137 bits (294), Expect = 2e-033
Identities = 60/85 (70%), Positives = 67/85 (78%)
Frame = +1 / +1
Query: 334 KGVFPHQGFPPEHQQQRQHLP*HS*GTVEPCFNYLKGSPVNLLTAHGPKP**SSCP*DCS 513
+G+ PHQG PPEHQQQRQHLP*HS G VEP +++KG PVNLL A GP+P** S *D
Sbjct: 1 EGLVPHQGLPPEHQQQRQHLP*HSQGAVEPGSDHIKGPPVNLLVADGPEP**PSGA*DRP 180
Query: 514 HVQDRQGQV*VHRTLLDTEVCHGLE 588
HVQD GQV*VH +LLD EVCHGLE
Sbjct: 181 HVQD**GQV*VHCSLLDAEVCHGLE 255
Score = 134 bits (287), Expect = 2e-032
Identities = 55/84 (65%), Positives = 60/84 (71%)
Frame = -3 / -3
Query: 587 SSPWHTSVSRSVRWTHTWPCRSCTCEQSQGQEDHQGLGP*AVSRLTGEPLR*LKQGSTVP 408
SSPWHTS SRS +WTHTWP +SCTC +SQ E HQG GP A SRLTG PL + GST P
Sbjct: 254 SSPWHTSASRSEQWTHTWPYQSCTCGRSQAPEGHQGSGPSATSRLTGGPLIWSEPGSTAP 75
Query: 407 *ECQGKXXXXXXCSGGKPWCGKTP 336
*ECQGK CSGG+PWCG P
Sbjct: 74 *ECQGKCCRCC*CSGGRPWCGTRP 3
Score = 25.4 bits (49), Expect(3) = 3e-056
Identities = 8/10 (80%), Positives = 9/10 (90%)
Frame = +1 / +1
Query: 712 VLPCEVRCVW 741
+LPCEVR VW
Sbjct: 412 LLPCEVRSVW 441
Score = 22.1 bits (42), Expect(3) = 3e-056
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = +3 / +2
Query: 633 NRYHLNN 653
NRYHLNN
Sbjct: 308 NRYHLNN 328
>gb|CN820019.1|CN820019 HRO4410_B08_C16ZS5 Lib AA069E1X Avena sativa cv. Ogle-C etiolated
leaf Avena sativa cDNA clone HRO4410_B08_C16, mRNA
sequence
Length = 560
Score = 203 bits (437), Expect = 5e-053
Identities = 80/86 (93%), Positives = 85/86 (98%)
Frame = +2 / +2
Query: 323 FKPPKVSFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVP 502
F+PPKV+FRTKVFHPNINSNGSICLDILK+QWSPALTISKVLLSICSLLTDPNPDDPLVP
Sbjct: 26 FQPPKVAFRTKVFHPNINSNGSICLDILKDQWSPALTISKVLLSICSLLTDPNPDDPLVP 205
Query: 503 EIAHMYKTDRAKYESTARSWTQKYAM 580
EIAHMYKTDR KYESTAR+WTQ+YAM
Sbjct: 206 EIAHMYKTDRHKYESTARTWTQRYAM 283
Score = 133 bits (285), Expect = 4e-032
Identities = 61/82 (74%), Positives = 64/82 (78%)
Frame = -2 / -3
Query: 579 MAYFCVQERAVDSYLALSVLYM*AISGTRGSSGFGSVSSEQIDRRTFEIVKAGLHCSLRM 400
MAY VQ AV SYL SVLYM AISGTRGSSGFGSVS EQ+D T E+V+AGLH S RM
Sbjct: 282 MAYL*VQVLAVLSYLCRSVLYMWAISGTRGSSGFGSVSREQMDSNTLEMVRAGLHWSFRM 103
Query: 399 SRQMLPLLLMFGWKTLVRKDTF 334
SRQMLPLLLMFGW T VR TF
Sbjct: 102 SRQMLPLLLMFGWNTFVRNATF 37
>gb|CN820188.1|CN820188 HRO4412_B09_D18ZS5 Lib AA069E1X Avena sativa cv. Ogle-C etiolated
leaf Avena sativa cDNA clone HRO4412_B09_D18, mRNA
sequence
Length = 540
Score = 203 bits (437), Expect = 5e-053
Identities = 80/86 (93%), Positives = 85/86 (98%)
Frame = +2 / +1
Query: 323 FKPPKVSFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVP 502
F+PPKV+FRTKVFHPNINSNGSICLDILK+QWSPALTISKVLLSICSLLTDPNPDDPLVP
Sbjct: 22 FQPPKVAFRTKVFHPNINSNGSICLDILKDQWSPALTISKVLLSICSLLTDPNPDDPLVP 201
Query: 503 EIAHMYKTDRAKYESTARSWTQKYAM 580
EIAHMYKTDR KYESTAR+WTQ+YAM
Sbjct: 202 EIAHMYKTDRHKYESTARTWTQRYAM 279
Score = 133 bits (285), Expect = 4e-032
Identities = 61/82 (74%), Positives = 64/82 (78%)
Frame = -2 / -2
Query: 579 MAYFCVQERAVDSYLALSVLYM*AISGTRGSSGFGSVSSEQIDRRTFEIVKAGLHCSLRM 400
MAY VQ AV SYL SVLYM AISGTRGSSGFGSVS EQ+D T E+V+AGLH S RM
Sbjct: 278 MAYL*VQVLAVLSYLCRSVLYMWAISGTRGSSGFGSVSREQMDSNTLEMVRAGLHWSFRM 99
Query: 399 SRQMLPLLLMFGWKTLVRKDTF 334
SRQMLPLLLMFGW T VR TF
Sbjct: 98 SRQMLPLLLMFGWNTFVRNATF 33
>gb|CN816098.1|CN816098 HRO4517_A02_A03ZS5 Lib AA071E1X Avena sativa cv. Ogle-C root Avena
sativa cDNA clone HRO4517_A02_A03, mRNA sequence
Length = 641
Score = 173 bits (372), Expect = 4e-044
Identities = 69/75 (92%), Positives = 73/75 (97%)
Frame = +2 / +2
Query: 335 KVSFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAH 514
+V+F+TKVFHPN+NSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAH
Sbjct: 416 QVAFKTKVFHPNVNSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAH 595
Query: 515 MYKTDRAKYESTARS 559
MYK DR KYESTARS
Sbjct: 596 MYKADRTKYESTARS 640
Score = 128 bits (275), Expect = 1e-030
Identities = 56/72 (77%), Positives = 59/72 (81%)
Frame = -2 / -3
Query: 552 AVDSYLALSVLYM*AISGTRGSSGFGSVSSEQIDRRTFEIVKAGLHCSLRMSRQMLPLLL 373
AVDSY S LYM*AISGT GSSGFGSVS EQI+R TFEIV AGLHCS ++SRQMLPLLL
Sbjct: 633 AVDSYFVRSALYM*AISGTSGSSGFGSVSKEQIERSTFEIVSAGLHCSFKISRQMLPLLL 454
Query: 372 MFGWKTLVRKDT 337
FGW TLV K T
Sbjct: 453 TFGWNTLVLKAT 418
>gb|CN814688.1|CN814688 HRO4501_D09_G17ZS5 Lib AA071E1X Avena sativa cv. Ogle-C root Avena
sativa cDNA clone HRO4501_D09_G17, mRNA sequence
Length = 564
Score = 171 bits (367), Expect = 2e-043
Identities = 69/81 (85%), Positives = 73/81 (90%)
Frame = +2 / +3
Query: 344 FRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYK 523
F KV+HPNINSNGSICLDILKEQWSPALTISKVLLSI SLLTDPNPDDPLVPEIAH+YK
Sbjct: 15 F*NKVYHPNINSNGSICLDILKEQWSPALTISKVLLSISSLLTDPNPDDPLVPEIAHLYK 194
Query: 524 TDRAKYESTARSWTQKYAMG* 586
R +YE TA +WTQKYAMG*
Sbjct: 195 NQRTRYEETASAWTQKYAMG* 257
Score = 107 bits (228), Expect = 3e-024
Identities = 52/77 (67%), Positives = 57/77 (74%)
Frame = -2 / -3
Query: 582 PMAYFCVQERAVDSYLALSVLYM*AISGTRGSSGFGSVSSEQIDRRTFEIVKAGLHCSLR 403
PMAYF VQ AV S L L AISGTRGSSG GSV E ++RRT ++V+AGLHCSLR
Sbjct: 253 PMAYFWVQALAVSS*RVLWFL*RCAISGTRGSSGLGSVRRELMERRTLDMVRAGLHCSLR 74
Query: 402 MSRQMLPLLLMFGWKTL 352
MSRQMLPL LMFG TL
Sbjct: 73 MSRQMLPLELMFG*YTL 23
>gb|CN815364.1|CN815364 HRO4508_H03_P06ZS5 Lib AA071E1X Avena sativa cv. Ogle-C root Avena
sativa cDNA clone HRO4508_H03_P06, mRNA sequence
Length = 377
Score = 161 bits (347), Expect(2) = 3e-041
Identities = 67/68 (98%), Positives = 67/68 (98%)
Frame = +2 / +3
Query: 383 GSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRAKYESTARSW 562
GSICLDIL EQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRAKYESTARSW
Sbjct: 3 GSICLDIL*EQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRAKYESTARSW 182
Query: 563 TQKYAMG* 586
TQKYAMG*
Sbjct: 183 TQKYAMG* 206
Score = 144 bits (309), Expect(2) = 2e-035
Identities = 62/68 (91%), Positives = 66/68 (97%)
Frame = -2 / -2
Query: 585 *PMAYFCVQERAVDSYLALSVLYM*AISGTRGSSGFGSVSSEQIDRRTFEIVKAGLHCSL 406
*PMAYFCVQERAVDSYLALSVLYM AISGTRGSSGFGSVS+EQIDRRTF++V+AGLHCS
Sbjct: 205 *PMAYFCVQERAVDSYLALSVLYMWAISGTRGSSGFGSVSNEQIDRRTFDMVRAGLHCS* 26
Query: 405 RMSRQMLP 382
RMSRQMLP
Sbjct: 25 RMSRQMLP 2
Score = 113 bits (241), Expect = 5e-026
Identities = 45/66 (68%), Positives = 49/66 (74%)
Frame = -3 / -3
Query: 587 SSPWHTSVSRSVRWTHTWPCRSCTCEQSQGQEDHQGLGP*AVSRLTGEPLR*LKQGSTVP 408
SSPWHTS SRS +WTHTWP +SCTC +SQ E HQG GP A SRLTG PL + GST P
Sbjct: 207 SSPWHTSASRSEQWTHTWPYQSCTCGRSQAPEGHQGSGPSATSRLTGGPLIWSEPGSTAP 28
Query: 407 *ECQGK 390
ECQGK
Sbjct: 27 RECQGK 10
Score = 103 bits (219), Expect = 5e-023
Identities = 48/69 (69%), Positives = 53/69 (76%)
Frame = +1 / +2
Query: 382 RQHLP*HS*GTVEPCFNYLKGSPVNLLTAHGPKP**SSCP*DCSHVQDRQGQV*VHRTLL 561
RQHLP*HS G VEP +++KG PVNLL A GP+P** S *D HVQD GQV*VH +LL
Sbjct: 2 RQHLP*HSLGAVEPGSDHIKGPPVNLLVADGPEP**PSGA*DRPHVQD**GQV*VHCSLL 181
Query: 562 DTEVCHGLE 588
D EVCHGLE
Sbjct: 182 DAEVCHGLE 208
Score = 22.1 bits (42), Expect(2) = 3e-041
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = +3 / +3
Query: 633 NRYHLNN 653
NRYHLNN
Sbjct: 261 NRYHLNN 281
Score = 21.7 bits (41), Expect(2) = 2e-035
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = -2 / -3
Query: 654 GYLGDND 634
GYLGDND
Sbjct: 282 GYLGDND 262
>gb|CN817480.1|CN817480 HRO4466_C01_F02ZS5 Lib AA070E1X Avena sativa cv. Ogle-C green leaf
Avena sativa cDNA clone HRO4466_C01_F02, mRNA sequence
Length = 510
Score = 153 bits (329), Expect = 4e-038
Identities = 62/65 (95%), Positives = 65/65 (100%)
Frame = +2 / +2
Query: 395 LDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRAKYESTARSWTQKY 574
LDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDR+KYE+TARSWTQKY
Sbjct: 14 LDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRSKYETTARSWTQKY 193
Query: 575 AMG*K 589
AMG*+
Sbjct: 194 AMG*R 208
Score = 111 bits (238), Expect = 1e-025
Identities = 50/63 (79%), Positives = 52/63 (82%)
Frame = -2 / -1
Query: 582 PMAYFCVQERAVDSYLALSVLYM*AISGTRGSSGFGSVSSEQIDRRTFEIVKAGLHCSLR 403
PMAYFCVQ RAV SY SVLYM AISGTRGSSG GSVS EQI+ T EIVKAGLHCSLR
Sbjct: 201 PMAYFCVQLRAVVSYFDRSVLYMWAISGTRGSSGLGSVSREQIESNTLEIVKAGLHCSLR 22
Query: 402 MSR 394
+SR
Sbjct: 21 ISR 13
>gb|CN816654.1|CN816654 HRO4523_C06_F11ZS5 Lib AA071E1X Avena sativa cv. Ogle-C root Avena
sativa cDNA clone HRO4523_C06_F11, mRNA sequence
Length = 821
Score = 141 bits (302), Expect = 2e-034
Identities = 55/120 (45%), Positives = 75/120 (62%)
Frame = +2 / -2
Query: 197 SCSAGPVGEDMFHWQATIMGPSDSPFAGGVFLVNIHFPPDYPFKPPKVSFRTKVFHPNIN 376
S S P ++ W A I GP D+P+ GG F + + F DYP KPP V F +++FHPNI
Sbjct: 622 STSGAPHDNNITLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIY 443
Query: 377 SNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRAKYESTAR 556
++GSICLDIL+ QWSP ++ +L S+ SLL DPNP+ P E A MY ++ +Y R
Sbjct: 442 ADGSICLDILQNQWSPIYDVAAILTSVQSLLCDPNPNSPANSEAARMYSENKREYNRKVR 263
>gb|CN815849.1|CN815849 HRO4511_B08_D15ZS5 Lib AA071E1X Avena sativa cv. Ogle-C root Avena
sativa cDNA clone HRO4511_B08_D15, mRNA sequence
Length = 620
Score = 138 bits (295), Expect = 2e-033
Identities = 52/107 (48%), Positives = 70/107 (65%)
Frame = +2 / +3
Query: 236 WQATIMGPSDSPFAGGVFLVNIHFPPDYPFKPPKVSFRTKVFHPNINSNGSICLDILKEQ 415
W A I GP D+P+ GG F + + F DYP KPP V F +++FHPNI ++GSICLDIL+ Q
Sbjct: 12 WNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQ 191
Query: 416 WSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRAKYESTAR 556
WSP ++ +L S+ SLL DPNP+ P E A MY ++ +Y R
Sbjct: 192 WSPIYDVAAILTSVQSLLCDPNPNSPANSEAARMYSENKREYNRKVR 332
>gb|CN821493.1|CN821493 HRO4425_H11_O21ZS5 Lib AA069E1X Avena sativa cv. Ogle-C etiolated
leaf Avena sativa cDNA clone HRO4425_H11_O21, mRNA
sequence
Length = 443
Score = 123 bits (263), Expect(3) = 1e-032
Identities = 50/51 (98%), Positives = 51/51 (100%)
Frame = +2 / +1
Query: 434 ISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRAKYESTARSWTQKYAMG* 586
+SKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRAKYESTARSWTQKYAMG*
Sbjct: 22 LSKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRAKYESTARSWTQKYAMG* 174
Score = 105 bits (225), Expect = 8e-024
Identities = 46/50 (92%), Positives = 48/50 (96%)
Frame = -2 / -1
Query: 585 *PMAYFCVQERAVDSYLALSVLYM*AISGTRGSSGFGSVSSEQIDRRTFE 436
*PMAYFCVQERAVDSYLALSVLYM AISGT GSSGFGSVS+EQIDRRTF+
Sbjct: 173 *PMAYFCVQERAVDSYLALSVLYMWAISGTSGSSGFGSVSNEQIDRRTFD 24
Score = 24.9 bits (48), Expect(3) = 1e-032
Identities = 8/10 (80%), Positives = 9/10 (90%)
Frame = +1 / +2
Query: 712 VLPCEVRCVW 741
+LPCEVR VW
Sbjct: 338 LLPCEVRWVW 367
Score = 24.4 bits (47), Expect(3) = 1e-032
Identities = 8/12 (66%), Positives = 10/12 (83%)
Frame = +3 / +1
Query: 627 TPNRYHLNNQSS 662
T NRYHLNN ++
Sbjct: 226 TKNRYHLNNPAN 261
>gb|CN820944.1|CN820944 HRO4421_G05_M09ZS5 Lib AA069E1X Avena sativa cv. Ogle-C etiolated
leaf Avena sativa cDNA clone HRO4421_G05_M09, mRNA
sequence
Length = 745
Score = 133 bits (284), Expect = 6e-032
Identities = 51/107 (47%), Positives = 69/107 (64%)
Frame = +2 / +1
Query: 236 WQATIMGPSDSPFAGGVFLVNIHFPPDYPFKPPKVSFRTKVFHPNINSNGSICLDILKEQ 415
W A I GP D+P+ GG F + + F DYP KPP V F +++FH NI ++GSICLDIL+ Q
Sbjct: 7 WNAVIFGPDDTPWDGGTFKLTLQFSEDYPNKPPTVRFVSRMFHSNIYADGSICLDILQNQ 186
Query: 416 WSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRAKYESTAR 556
WSP ++ +L SI SLL DPNP+ P E A M+ ++ +Y R
Sbjct: 187 WSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMFSENKREYNRKVR 327
>gb|CN814697.1|CN814697 HRO4501_E06_I11ZS5 Lib AA071E1X Avena sativa cv. Ogle-C root Avena
sativa cDNA clone HRO4501_E06_I11, mRNA sequence
Length = 409
Score = 124 bits (266), Expect = 2e-029
Identities = 50/60 (83%), Positives = 54/60 (90%)
Frame = +2 / +1
Query: 407 KEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRAKYESTARSWTQKYAMG* 586
+ + P ISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDR+KYE+TARSWTQKYAMG*
Sbjct: 1 RHEVEPCFDISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRSKYETTARSWTQKYAMG* 180
>gb|CN815167.1|CN815167 HRO4506_F04_K08ZS5 Lib AA071E1X Avena sativa cv. Ogle-C root Avena
sativa cDNA clone HRO4506_F04_K08, mRNA sequence
Length = 552
Score = 120 bits (257), Expect = 3e-028
Identities = 46/98 (46%), Positives = 65/98 (66%)
Frame = +2 / +2
Query: 263 DSPFAGGVFLVNIHFPPDYPFKPPKVSFRTKVFHPNINSNGSICLDILKEQWSPALTISK 442
D+P+ GG F + + F DYP KPP V F +++FHPNI ++GSICLDIL+ QWSP ++
Sbjct: 23 DTPWDGGTFKLTLQFTEDYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAA 202
Query: 443 VLLSICSLLTDPNPDDPLVPEIAHMYKTDRAKYESTAR 556
+L SI SLL DPNP+ P E A ++ ++ +Y R
Sbjct: 203 ILTSIQSLLCDPNPNSPANSEAARLFSENKREYNRKVR 316
>gb|CN820524.1|CN820524 HRO4413_D03_G05ZS5 Lib AA069E1X Avena sativa cv. Ogle-C etiolated
leaf Avena sativa cDNA clone HRO4413_D03_G05, mRNA
sequence
Length = 393
Score = 108 bits (230), Expect = 2e-024
Identities = 42/44 (95%), Positives = 44/44 (100%)
Frame = +2 / +1
Query: 455 ICSLLTDPNPDDPLVPEIAHMYKTDRAKYESTARSWTQKYAMG* 586
ICSLLTDPNPDDPLVPEIAHMYKTDR+KYE+TARSWTQKYAMG*
Sbjct: 16 ICSLLTDPNPDDPLVPEIAHMYKTDRSKYETTARSWTQKYAMG* 147
>gb|CN817131.1|CN817131 HRO4528_E12_J24ZS5 Lib AA071E1X Avena sativa cv. Ogle-C root Avena
sativa cDNA clone HRO4528_E12_J24, mRNA sequence
Length = 726
Score = 74.8 bits (157), Expect(2) = 4e-024
Identities = 26/51 (50%), Positives = 35/51 (68%)
Frame = +2 / +2
Query: 224 DMFHWQATIMGPSDSPFAGGVFLVNIHFPPDYPFKPPKVSFRTKVFHPNIN 376
++F W A I GPS++PF GGVF + P YP PP+V F TK+FHPN++
Sbjct: 110 NIFKWTALIKGPSETPFEGGVFQLAFSIPEQYPLLPPQVRFLTKIFHPNVH 262
Score = 51.5 bits (106), Expect(2) = 4e-024
Identities = 20/38 (52%), Positives = 24/38 (63%)
Frame = +2 / +2
Query: 383 GSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPL 496
G ICLDILK WSPA T+ V +I +L+ P D PL
Sbjct: 272 GEICLDILKNAWSPAWTLQSVCRAIIALMAHPEADSPL 385
>gb|CN816956.1|CN816956 HRO4526_F10_K20ZS5 Lib AA071E1X Avena sativa cv. Ogle-C root Avena
sativa cDNA clone HRO4526_F10_K20, mRNA sequence
Length = 577
Score = 102 bits (218), Expect = 7e-023
Identities = 40/80 (50%), Positives = 54/80 (67%)
Frame = +2 / +3
Query: 317 YPFKPPKVSFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPL 496
YP KPP V F +++FHPNI ++GSICLDIL+ QWSP ++ +L SI SLL DPNP+ P
Sbjct: 12 YPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPA 191
Query: 497 VPEIAHMYKTDRAKYESTAR 556
E A M+ ++ +Y R
Sbjct: 192 NSEAARMFSENKREYNRKVR 251
>gb|CN818122.1|CN818122 HRO4471_F01_K01ZS5 Lib AA070E1X Avena sativa cv. Ogle-C green leaf
Avena sativa cDNA clone HRO4471_F01_K01, mRNA sequence
Length = 650
Score = 96.8 bits (205), Expect = 5e-021
Identities = 40/118 (33%), Positives = 63/118 (53%)
Frame = +2 / +2
Query: 188 PPTSCSAGPVGEDMFHWQATIMGPSDSPFAGGVFLVNIHFPPDYPFKPPKVSFRTKVFHP 367
P T+ + P G+D + P + + GG F YP + PKV +TKV+HP
Sbjct: 296 PKTTKISFPNGKDDLMNFEATLRPDEGYYLGGAFTFTFQVSASYPHEAPKVKCKTKVYHP 475
Query: 368 NINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRAKY 541
NI+ G++CL+IL+E W P L I+ ++ + L + PN +DPL E A + + K+
Sbjct: 476 NIDLEGNVCLNILREDWKPVLNINTIIYGLNLLFSQPNDEDPLNHEAAAVLRDYPQKF 649
Database: Avena_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:15 PM
Number of letters in database: 4,702,463
Number of sequences in database: 8143
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 9,701,187
Number of Sequences: 8143
Number of extensions: 141525
Number of successful extensions: 1255
Number of sequences better than 1.0e-020: 22
length of database: 1,567,487
effective HSP length: 43
effective length of database: 1,217,338
effective search space used: 323811908
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)