TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2437714.2.1
(1649 letters)
Database: Avena_nucl_with_EST.fasta
8143 sequences; 4,702,463 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CN816079.1|CN816079 HRO4516_F12_L24ZS5 Lib AA071E1X Aven... 107 3e-047
gb|CN815880.1|CN815880 HRO4511_E05_J09ZS5 Lib AA071E1X Aven... 85 2e-041
gb|CN814884.1|CN814884 HRO4503_E08_J15ZS5 Lib AA071E1X Aven... 146 2e-040
gb|CN816284.1|CN816284 HRO4519_A04_B07ZS5 Lib AA071E1X Aven... 145 2e-035
gb|AY083681.1| Avena sativa clone OP14 receptor kinase gene... 68 3e-034
gb|AY083679.1| Avena sativa clone OP10rc receptor kinase ge... 68 3e-034
gb|AY083682.1| Avena sativa clone OP45 receptor kinase gene... 68 3e-034
gb|CN815656.1|CN815656 HRO4514_A12_A24ZS5 Lib AA071E1X Aven... 65 2e-033
gb|AY083680.1| Avena sativa clone OP9 receptor kinase gene ... 65 7e-032
gb|CN814886.1|CN814886 HRO4503_E10_J19ZS5 Lib AA071E1X Aven... 78 3e-028
gb|CN817203.1|CN817203 HRO4458_E09_J18ZS5 Lib AA070E1X Aven... 51 3e-027
gb|AY038002.1| Avena sativa isolate Pc68LrkA receptor kinas... 57 5e-026
gb|CN818659.1|CN818659 HRO4455_A08_A15ZS5 Lib AA070E1X Aven... 82 5e-026
gb|CN818925.1|CN818925 HRO4455_H03_O05ZS5 Lib AA070E1X Aven... 46 3e-024
gb|CN820657.1|CN820657 HRO4415_H08_P15ZS5 Lib AA069E1X Aven... 103 6e-024
emb|AJ629310.1| Avena strigosa partial s5.6 gene for recept... 45 2e-023
>gb|CN816079.1|CN816079 HRO4516_F12_L24ZS5 Lib AA071E1X Avena sativa cv. Ogle-C root Avena
sativa cDNA clone HRO4516_F12_L24, mRNA sequence
Length = 827
Score = 107 bits (228), Expect(3) = 3e-047
Identities = 42/68 (61%), Positives = 54/68 (79%)
Frame = -1 / +2
Query: 947 DQTHVSTRVMGTYGYAAPEYVMTGHLTARSDVYSFGVVLLELLTGRKSIDKSRPSREQSL 768
+ THVSTRVMGT+GY APEY +G LT +SDV+SFGV+LLEL+TGR+ +D ++ + SL
Sbjct: 287 NNTHVSTRVMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELITGRRPVDSNQTYMDDSL 466
Query: 767 VDWALPKL 744
VDWA P L
Sbjct: 467 VDWARPLL 490
Score = 69.3 bits (145), Expect(3) = 3e-047
Identities = 31/61 (50%), Positives = 36/61 (59%)
Frame = -1 / +2
Query: 1223 IGYCCEDDHRLLVYEFMFRGSLENHLFRKTATPLPWGTRMSIALGAAKGLACLHNAQRPV 1044
+GYC RLLVYEF+ +LE HL K L W R+ IALGAAKGLA +H P
Sbjct: 11 VGYCISGGKRLLVYEFVTNNTLEFHLHGKGRPTLEWPIRLRIALGAAKGLAYIHEDCHPK 190
Query: 1043 I 1041
I
Sbjct: 191 I 193
Score = 46.4 bits (95), Expect(3) = 3e-047
Identities = 18/28 (64%), Positives = 24/28 (85%)
Frame = -1 / +2
Query: 1046 VIYRDFKTSNILLDSDYTAKLSDFGLAK 963
+I+RD K+SNILLD + AK++DFGLAK
Sbjct: 191 IIHRDIKSSNILLDFKFEAKVADFGLAK 274
>gb|CN815880.1|CN815880 HRO4511_E05_J09ZS5 Lib AA071E1X Avena sativa cv. Ogle-C root Avena
sativa cDNA clone HRO4511_E05_J09, mRNA sequence
Length = 818
Score = 85.4 bits (180), Expect(5) = 2e-041
Identities = 32/54 (59%), Positives = 42/54 (77%)
Frame = -1 / +2
Query: 1295 QGHREWLTEVNCLGQLRHPNLVKLIGYCCEDDHRLLVYEFMFRGSLENHLFRKT 1134
QG +++ EV+ +G ++H NLVKLIG+CCE DHRLLVYE M GSL +HLF K+
Sbjct: 197 QGEKQFRAEVSSIGLIQHINLVKLIGFCCEGDHRLLVYEHMLNGSLNSHLFMKS 358
Score = 52.8 bits (109), Expect(5) = 2e-041
Identities = 20/48 (41%), Positives = 33/48 (68%)
Frame = -1 / +2
Query: 947 DQTHVSTRVMGTYGYAAPEYVMTGHLTARSDVYSFGVVLLELLTGRKS 804
D + + T GT GY APE++ +T + DVY FG+VL+E+++GR++
Sbjct: 551 DFSRILTTFRGTAGYLAPEWLSGVAITPKIDVYGFGMVLMEIISGRRN 694
Score = 35.9 bits (72), Expect(5) = 2e-041
Identities = 13/27 (48%), Positives = 20/27 (74%)
Frame = -1 / +2
Query: 1046 VIYRDFKTSNILLDSDYTAKLSDFGLA 966
+I+ D K NIL+D+ + K++DFGLA
Sbjct: 455 IIHCDVKPENILVDASFVPKVADFGLA 535
Score = 34.5 bits (69), Expect(5) = 2e-041
Identities = 13/23 (56%), Positives = 16/23 (69%)
Frame = -1 / +2
Query: 1124 LPWGTRMSIALGAAKGLACLHNA 1056
L W TR IALG A+GL+ LH +
Sbjct: 374 LSWNTRYQIALGVARGLSYLHQS 442
Score = 29.9 bits (59), Expect(5) = 2e-041
Identities = 10/17 (58%), Positives = 14/17 (82%)
Frame = -1 / +2
Query: 1406 LGEGGFGTVYKGYIDEN 1356
LG GGFG+VYKG + ++
Sbjct: 107 LGGGGFGSVYKGVLSDS 157
>gb|CN814884.1|CN814884 HRO4503_E08_J15ZS5 Lib AA071E1X Avena sativa cv. Ogle-C root Avena
sativa cDNA clone HRO4503_E08_J15, mRNA sequence
Length = 830
Score = 146 bits (314), Expect(2) = 2e-040
Identities = 61/109 (55%), Positives = 81/109 (74%)
Frame = -1 / +1
Query: 1058 AQRPVIYRDFKTSNILLDSDYTAKLSDFGLAKDGPEGDQTHVSTRVMGTYGYAAPEYVMT 879
AQ +I+RD K+SN+LL D AK++DF L+ P+ STRV+GT+GY APEY MT
Sbjct: 160 AQPHIIHRDIKSSNVLLFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPEYAMT 339
Query: 878 GHLTARSDVYSFGVVLLELLTGRKSIDKSRPSREQSLVDWALPKLNDKR 732
G L+++SDVYSFGVVLLELLTGRK +D + P +QSLV WA P+L++ +
Sbjct: 340 GQLSSKSDVYSFGVVLLELLTGRKPVDHTLPRGQQSLVTWATPRLSEDK 486
Score = 35.0 bits (70), Expect(2) = 2e-040
Identities = 15/28 (53%), Positives = 18/28 (64%)
Frame = -1 / +1
Query: 1124 LPWGTRMSIALGAAKGLACLHNAQRPVI 1041
L W R+ IA+GAAKGL LH +P I
Sbjct: 91 LSWVQRVKIAVGAAKGLEYLHEKAQPHI 174
>gb|CN816284.1|CN816284 HRO4519_A04_B07ZS5 Lib AA071E1X Avena sativa cv. Ogle-C root Avena
sativa cDNA clone HRO4519_A04_B07, mRNA sequence
Length = 747
Score = 145 bits (311), Expect = 2e-035
Identities = 60/109 (55%), Positives = 81/109 (74%)
Frame = -1 / +1
Query: 1058 AQRPVIYRDFKTSNILLDSDYTAKLSDFGLAKDGPEGDQTHVSTRVMGTYGYAAPEYVMT 879
+Q +I+RD K+SN+LL D AK++DF L+ P+ STRV+GT+GY APEY MT
Sbjct: 22 SQPHIIHRDIKSSNVLLFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTFGYHAPEYAMT 201
Query: 878 GHLTARSDVYSFGVVLLELLTGRKSIDKSRPSREQSLVDWALPKLNDKR 732
G L+++SDVYSFGVVLLELLTGRK +D + P +QSLV WA P+L++ +
Sbjct: 202 GQLSSKSDVYSFGVVLLELLTGRKPVDHTLPRGQQSLVTWATPRLSEDK 348
>gb|AY083681.1| Avena sativa clone OP14 receptor kinase gene cluster, complete
sequence
Length = 13990
Score = 68.4 bits (143), Expect(4) = 3e-034
Identities = 26/62 (41%), Positives = 44/62 (70%)
Frame = -1 / -2
Query: 1328 VAVKVLNKDGHQGHREWLTEVNCLGQLRHPNLVKLIGYCCEDDHRLLVYEFMFRGSLENH 1149
VAVK+L + ++++EV+ LG++ H N+V+L+G+C E+ R LVYE+M GSL+ +
Sbjct: 1968 VAVKMLEGNSSCNGEDFISEVSTLGRIHHVNVVRLVGFCSEELRRALVYEYMPHGSLDKY 1789
Query: 1148 LF 1143
+F
Sbjct: 1788 IF 1783
Score = 58.8 bits (122), Expect(4) = 3e-034
Identities = 24/54 (44%), Positives = 35/54 (64%)
Frame = -1 / -2
Query: 1046 VIYRDFKTSNILLDSDYTAKLSDFGLAKDGPEGDQTHVSTRVMGTYGYAAPEYV 885
+++ D K NILLD+++ K++DFGLAK P GD + + GT GY APE +
Sbjct: 1686 ILHFDIKPHNILLDTNFVPKVADFGLAKLYPRGDSFVPLSAMRGTVGYIAPEMI 1525
Score = 54.7 bits (113), Expect(5) = 1e-033
Identities = 20/46 (43%), Positives = 31/46 (67%)
Frame = -1 / +2
Query: 1280 WLTEVNCLGQLRHPNLVKLIGYCCEDDHRLLVYEFMFRGSLENHLF 1143
++ EV +G + H N+V+L+G+C E R L+YEFM SLE ++F
Sbjct: 8498 FINEVATIGLIHHANIVRLLGFCSEGMRRALIYEFMPNESLEKYIF 8635
Score = 51.9 bits (107), Expect(5) = 1e-033
Identities = 23/52 (44%), Positives = 30/52 (57%)
Frame = -1 / +2
Query: 1046 VIYRDFKTSNILLDSDYTAKLSDFGLAKDGPEGDQTHVSTRVMGTYGYAAPE 891
+++ D K NILLD ++ K+SDFGLAK + T GT GY APE
Sbjct: 8747 ILHFDIKPHNILLDYNFNPKISDFGLAKLCAKDQSIVTLTAARGTMGYIAPE 8902
Score = 41.4 bits (84), Expect(5) = 1e-033
Identities = 15/33 (45%), Positives = 27/33 (81%)
Frame = -1 / +2
Query: 878 GHLTARSDVYSFGVVLLELLTGRKSIDKSRPSR 780
G ++ +SDVYSFG+++LE+++GR++ D S S+
Sbjct: 8921 GGISYKSDVYSFGMLVLEMVSGRRNSDPSTESQ 9019
Score = 40.5 bits (82), Expect(4) = 3e-034
Identities = 15/35 (42%), Positives = 26/35 (74%)
Frame = -1 / -2
Query: 878 GHLTARSDVYSFGVVLLELLTGRKSIDKSRPSREQ 774
G ++++SDVYSFG++LLE+ GR++ D + + Q
Sbjct: 1512 GVISSKSDVYSFGMLLLEMAGGRRNADPNAAASSQ 1408
Score = 35.0 bits (70), Expect(5) = 1e-033
Identities = 13/25 (52%), Positives = 18/25 (72%)
Frame = -1 / +2
Query: 1406 LGEGGFGTVYKGYIDENVRVGLKSL 1332
+G+GGFG+VYKG + V V +K L
Sbjct: 8396 VGQGGFGSVYKGELPNRVPVAVKML 8470
Score = 29.0 bits (57), Expect(4) = 3e-034
Identities = 9/14 (64%), Positives = 13/14 (92%)
Frame = -1 / -2
Query: 1406 LGEGGFGTVYKGYI 1365
LG+GG+G+VYKG +
Sbjct: 2028 LGQGGYGSVYKGVL 1987
Score = 28.1 bits (55), Expect(5) = 1e-033
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = -1 / +2
Query: 659 LAFYCLSQNPKARPLMSDVVETL 591
+A +C+ NP+ RP M+ VV L
Sbjct: 9134 VALWCIQWNPRNRPSMTKVVNML 9202
>gb|AY083679.1| Avena sativa clone OP10rc receptor kinase gene cluster, complete
sequence
Length = 12232
Score = 68.4 bits (143), Expect(4) = 3e-034
Identities = 26/62 (41%), Positives = 44/62 (70%)
Frame = -1 / -2
Query: 1328 VAVKVLNKDGHQGHREWLTEVNCLGQLRHPNLVKLIGYCCEDDHRLLVYEFMFRGSLENH 1149
VAVK+L + ++++EV+ LG++ H N+V+L+G+C E+ R LVYE+M GSL+ +
Sbjct: 2046 VAVKMLEGNSSCNGEDFISEVSTLGRIHHVNVVRLVGFCSEELRRALVYEYMPHGSLDKY 1867
Query: 1148 LF 1143
+F
Sbjct: 1866 IF 1861
Score = 58.8 bits (122), Expect(4) = 3e-034
Identities = 24/54 (44%), Positives = 35/54 (64%)
Frame = -1 / -2
Query: 1046 VIYRDFKTSNILLDSDYTAKLSDFGLAKDGPEGDQTHVSTRVMGTYGYAAPEYV 885
+++ D K NILLD+++ K++DFGLAK P GD + + GT GY APE +
Sbjct: 1764 ILHFDIKPHNILLDTNFVPKVADFGLAKLYPRGDSFVPLSAMRGTVGYIAPEMI 1603
Score = 54.7 bits (113), Expect(5) = 1e-033
Identities = 20/46 (43%), Positives = 31/46 (67%)
Frame = -1 / +2
Query: 1280 WLTEVNCLGQLRHPNLVKLIGYCCEDDHRLLVYEFMFRGSLENHLF 1143
++ EV +G + H N+V+L+G+C E R L+YEFM SLE ++F
Sbjct: 8573 FINEVATIGLIHHANIVRLLGFCSEGMRRALIYEFMPNESLEKYIF 8710
Score = 51.9 bits (107), Expect(5) = 1e-033
Identities = 23/52 (44%), Positives = 30/52 (57%)
Frame = -1 / +2
Query: 1046 VIYRDFKTSNILLDSDYTAKLSDFGLAKDGPEGDQTHVSTRVMGTYGYAAPE 891
+++ D K NILLD ++ K+SDFGLAK + T GT GY APE
Sbjct: 8822 ILHFDIKPHNILLDYNFNPKISDFGLAKLCAKDQSIVTLTAARGTMGYIAPE 8977
Score = 41.4 bits (84), Expect(5) = 1e-033
Identities = 15/33 (45%), Positives = 27/33 (81%)
Frame = -1 / +2
Query: 878 GHLTARSDVYSFGVVLLELLTGRKSIDKSRPSR 780
G ++ +SDVYSFG+++LE+++GR++ D S S+
Sbjct: 8996 GGISYKSDVYSFGMLVLEMVSGRRNSDPSTESQ 9094
Score = 40.5 bits (82), Expect(4) = 3e-034
Identities = 15/35 (42%), Positives = 26/35 (74%)
Frame = -1 / -2
Query: 878 GHLTARSDVYSFGVVLLELLTGRKSIDKSRPSREQ 774
G ++++SDVYSFG++LLE+ GR++ D + + Q
Sbjct: 1590 GVISSKSDVYSFGMLLLEMAGGRRNADPNAAASSQ 1486
Score = 35.0 bits (70), Expect(5) = 1e-033
Identities = 13/25 (52%), Positives = 18/25 (72%)
Frame = -1 / +2
Query: 1406 LGEGGFGTVYKGYIDENVRVGLKSL 1332
+G+GGFG+VYKG + V V +K L
Sbjct: 8471 VGQGGFGSVYKGELPNRVPVAVKML 8545
Score = 29.0 bits (57), Expect(4) = 3e-034
Identities = 9/14 (64%), Positives = 13/14 (92%)
Frame = -1 / -2
Query: 1406 LGEGGFGTVYKGYI 1365
LG+GG+G+VYKG +
Sbjct: 2106 LGQGGYGSVYKGVL 2065
Score = 28.1 bits (55), Expect(5) = 1e-033
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = -1 / +2
Query: 659 LAFYCLSQNPKARPLMSDVVETL 591
+A +C+ NP+ RP M+ VV L
Sbjct: 9209 VALWCIQWNPRNRPSMTKVVNML 9277
>gb|AY083682.1| Avena sativa clone OP45 receptor kinase gene cluster, complete
sequence
Length = 16091
Score = 68.0 bits (142), Expect(4) = 1e-033
Identities = 24/62 (38%), Positives = 44/62 (70%)
Frame = -1 / -3
Query: 1328 VAVKVLNKDGHQGHREWLTEVNCLGQLRHPNLVKLIGYCCEDDHRLLVYEFMFRGSLENH 1149
+AVK+L + ++++EV+ +G++ H N+V+L+G+C E+ R LVYE+M GSL+ +
Sbjct: 5532 IAVKLLEGNSSCNGEDFISEVSTIGRIHHVNVVRLVGFCAEEMRRALVYEYMPHGSLDKY 5353
Query: 1148 LF 1143
+F
Sbjct: 5352 IF 5347
Score = 58.3 bits (121), Expect(4) = 1e-033
Identities = 24/54 (44%), Positives = 35/54 (64%)
Frame = -1 / -3
Query: 1046 VIYRDFKTSNILLDSDYTAKLSDFGLAKDGPEGDQTHVSTRVMGTYGYAAPEYV 885
+++ D K NILLDS++ K++DFGLAK P G+ + + GT GY APE +
Sbjct: 5250 ILHFDIKPHNILLDSNFVPKVADFGLAKLYPRGESFVPLSALRGTIGYIAPEMI 5089
Score = 55.1 bits (114), Expect(5) = 3e-034
Identities = 24/52 (46%), Positives = 30/52 (57%)
Frame = -1 / +3
Query: 1046 VIYRDFKTSNILLDSDYTAKLSDFGLAKDGPEGDQTHVSTRVMGTYGYAAPE 891
+++ D K NILLD ++ K+SDFGLAK P T GT GY APE
Sbjct: 11133 ILHFDIKPHNILLDYNFNPKISDFGLAKLCPRDQSIVTLTAARGTMGYIAPE 11288
Score = 55.1 bits (114), Expect(5) = 3e-034
Identities = 20/46 (43%), Positives = 31/46 (67%)
Frame = -1 / +3
Query: 1280 WLTEVNCLGQLRHPNLVKLIGYCCEDDHRLLVYEFMFRGSLENHLF 1143
++ EV +G + H N+V+L+G+C E R L+YEFM SLE ++F
Sbjct: 10884 FINEVAPIGLIHHANIVRLVGFCSEGTRRALIYEFMPNESLEKYIF 11021
Score = 41.8 bits (85), Expect(5) = 3e-034
Identities = 15/35 (42%), Positives = 28/35 (80%)
Frame = -1 / +3
Query: 878 GHLTARSDVYSFGVVLLELLTGRKSIDKSRPSREQ 774
G ++ +SDVYSFG+++LE+++GR++ D S S+ +
Sbjct: 11307 GEISYKSDVYSFGMLVLEMVSGRRNSDPSIESQNK 11411
Score = 39.1 bits (79), Expect(4) = 1e-033
Identities = 14/27 (51%), Positives = 23/27 (85%)
Frame = -1 / -3
Query: 878 GHLTARSDVYSFGVVLLELLTGRKSID 798
G ++++SDVYSFG++LLE+ GR++ D
Sbjct: 5076 GVISSKSDVYSFGMLLLEMAGGRRNAD 4996
Score = 33.1 bits (66), Expect(5) = 3e-034
Identities = 11/25 (44%), Positives = 18/25 (72%)
Frame = -1 / +3
Query: 1406 LGEGGFGTVYKGYIDENVRVGLKSL 1332
+G+GG+G+VY+G + V V +K L
Sbjct: 10782 IGQGGYGSVYRGELQNRVPVAVKML 10856
Score = 29.0 bits (57), Expect(4) = 1e-033
Identities = 9/14 (64%), Positives = 13/14 (92%)
Frame = -1 / -3
Query: 1406 LGEGGFGTVYKGYI 1365
LG+GG+G+VYKG +
Sbjct: 5592 LGQGGYGSVYKGVL 5551
Score = 28.1 bits (55), Expect(5) = 3e-034
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = -1 / +3
Query: 659 LAFYCLSQNPKARPLMSDVVETL 591
+A +C+ NP+ RP M+ VV L
Sbjct: 11520 VALWCIQWNPRNRPSMTKVVNML 11588
>gb|CN815656.1|CN815656 HRO4514_A12_A24ZS5 Lib AA071E1X Avena sativa cv. Ogle-C root Avena
sativa cDNA clone HRO4514_A12_A24, mRNA sequence
Length = 877
Score = 65.2 bits (136), Expect(3) = 2e-033
Identities = 26/62 (41%), Positives = 42/62 (67%)
Frame = -1 / +1
Query: 1328 VAVKVLNKDGHQGHREWLTEVNCLGQLRHPNLVKLIGYCCEDDHRLLVYEFMFRGSLENH 1149
+AVK L+ D QG E+ EV + +L+H NLVKL+G C + + ++LVYE++ SL++
Sbjct: 13 IAVKRLDSDSDQGFIEFKNEVELIAKLQHRNLVKLLGCCSQGEEKVLVYEYLPNKSLDDF 192
Query: 1148 LF 1143
+F
Sbjct: 193 IF 198
Score = 62.9 bits (131), Expect(3) = 2e-033
Identities = 23/41 (56%), Positives = 34/41 (82%)
Frame = -1 / +1
Query: 926 RVMGTYGYAAPEYVMTGHLTARSDVYSFGVVLLELLTGRKS 804
+V+GTYGY APEY G + +SDV+SFGV++LE+L+G+K+
Sbjct: 424 KVVGTYGYMAPEYASHGLFSIKSDVFSFGVLVLEILSGKKN 546
Score = 48.7 bits (100), Expect(3) = 2e-033
Identities = 20/28 (71%), Positives = 23/28 (82%)
Frame = -1 / +1
Query: 1046 VIYRDFKTSNILLDSDYTAKLSDFGLAK 963
VI+RD K NILLDS+ AK+SDFGLAK
Sbjct: 301 VIHRDLKPGNILLDSEMNAKISDFGLAK 384
>gb|AY083680.1| Avena sativa clone OP9 receptor kinase gene cluster, complete
sequence
Length = 10607
Score = 65.2 bits (136), Expect(4) = 7e-032
Identities = 24/62 (38%), Positives = 45/62 (72%)
Frame = -1 / -1
Query: 1328 VAVKVLNKDGHQGHREWLTEVNCLGQLRHPNLVKLIGYCCEDDHRLLVYEFMFRGSLENH 1149
VAVK+L + + ++++EV+ +G++ H N+V+L+G+C + R LVYE+M +GSL+ +
Sbjct: 9881 VAVKMLEGNSNCNGEDFISEVSTIGRIHHVNVVRLVGFCS*EMRRALVYEYMPQGSLDKY 9702
Query: 1148 LF 1143
+F
Sbjct: 9701 IF 9696
Score = 55.6 bits (115), Expect(5) = 8e-029
Identities = 20/46 (43%), Positives = 31/46 (67%)
Frame = -1 / +3
Query: 1280 WLTEVNCLGQLRHPNLVKLIGYCCEDDHRLLVYEFMFRGSLENHLF 1143
++ EV +G + H N+V+L+G+C E R L+YEFM SLE ++F
Sbjct: 3033 FINEVATIGLIHHANIVRLVGFCSEGTRRALLYEFMPNDSLEKYIF 3170
Score = 53.3 bits (110), Expect(4) = 7e-032
Identities = 22/54 (40%), Positives = 34/54 (62%)
Frame = -1 / -1
Query: 1046 VIYRDFKTSNILLDSDYTAKLSDFGLAKDGPEGDQTHVSTRVMGTYGYAAPEYV 885
+++ D K NILLD ++ K++DFGLAK P+ + + + GT GY APE +
Sbjct: 9599 IVHFDIKPHNILLDGNFVPKVADFGLAKLYPKNNSFVPLSVLRGTIGYIAPEMI 9438
Score = 40.9 bits (83), Expect(4) = 7e-032
Identities = 15/36 (41%), Positives = 27/36 (75%)
Frame = -1 / -1
Query: 878 GHLTARSDVYSFGVVLLELLTGRKSIDKSRPSREQS 771
G ++++SDVYSFG++LLE+ GR++ D + + Q+
Sbjct: 9425 GVVSSKSDVYSFGMLLLEMAGGRRNADSNAANSSQA 9318
Score = 40.5 bits (82), Expect(5) = 8e-029
Identities = 14/35 (40%), Positives = 28/35 (80%)
Frame = -1 / +3
Query: 878 GHLTARSDVYSFGVVLLELLTGRKSIDKSRPSREQ 774
G ++ +SDVYSFG+++LE+++GR++ D+ S+ +
Sbjct: 3456 GGISYKSDVYSFGMLVLEMVSGRRNSDQGIESQNE 3560
Score = 39.6 bits (80), Expect(5) = 8e-029
Identities = 15/28 (53%), Positives = 21/28 (75%)
Frame = -1 / +3
Query: 1046 VIYRDFKTSNILLDSDYTAKLSDFGLAK 963
+++ D K NILLD ++ K+SDFGLAK
Sbjct: 3282 ILHFDIKPHNILLDYNFNPKISDFGLAK 3365
Score = 34.5 bits (69), Expect(5) = 8e-029
Identities = 13/25 (52%), Positives = 18/25 (72%)
Frame = -1 / +3
Query: 1406 LGEGGFGTVYKGYIDENVRVGLKSL 1332
+G+GGFG+VYKG + V V +K L
Sbjct: 2931 VGQGGFGSVYKGELPNGVPVAVKVL 3005
Score = 29.0 bits (57), Expect(4) = 7e-032
Identities = 9/14 (64%), Positives = 13/14 (92%)
Frame = -1 / -1
Query: 1406 LGEGGFGTVYKGYI 1365
LG+GG+G+VYKG +
Sbjct: 9941 LGQGGYGSVYKGVL 9900
Score = 24.4 bits (47), Expect(5) = 8e-029
Identities = 8/16 (50%), Positives = 11/16 (68%)
Frame = -1 / +3
Query: 659 LAFYCLSQNPKARPLM 612
+A +C+ NPK RP M
Sbjct: 3669 VALWCIQWNPKNRPSM 3716
>gb|CN814886.1|CN814886 HRO4503_E10_J19ZS5 Lib AA071E1X Avena sativa cv. Ogle-C root Avena
sativa cDNA clone HRO4503_E10_J19, mRNA sequence
Length = 889
Score = 77.6 bits (163), Expect(3) = 3e-028
Identities = 35/72 (48%), Positives = 44/72 (61%)
Frame = -1 / +2
Query: 947 DQTHVSTRVMGTYGYAAPEYVMTGHLTARSDVYSFGVVLLELLTGRKSIDKSRPSREQSL 768
DQTHV T V GT+GY PEY T L+ +SDVYSFGVVL+ELL K + QSL
Sbjct: 311 DQTHVDTNVQGTFGYLDPEYFHTRQLSEKSDVYSFGVVLVELLLRMKPVFTGESGTVQSL 490
Query: 767 VDWALPKLNDKR 732
++ L + + R
Sbjct: 491 SNYFLQEFMEGR 526
Score = 47.3 bits (97), Expect(3) = 3e-028
Identities = 18/33 (54%), Positives = 26/33 (78%)
Frame = -1 / +2
Query: 1061 NAQRPVIYRDFKTSNILLDSDYTAKLSDFGLAK 963
+A + +RD K+SNILLD +YTAK+SDFG ++
Sbjct: 200 SASISIFHRDVKSSNILLDGNYTAKVSDFGASR 298
Score = 34.1 bits (68), Expect(3) = 3e-028
Identities = 16/38 (42%), Positives = 21/38 (55%)
Frame = -1 / +2
Query: 1232 VKLIGYCCEDDHRLLVYEFMFRGSLENHLFRKTATPLP 1119
VKL G C E + LLVY+++ GSL L + LP
Sbjct: 20 VKLFGCCLETEVPLLVYDYVSSGSLSEVLHADADSGLP 133
>gb|CN817203.1|CN817203 HRO4458_E09_J18ZS5 Lib AA070E1X Avena sativa cv. Ogle-C green leaf
Avena sativa cDNA clone HRO4458_E09_J18, mRNA sequence
Length = 811
Score = 50.6 bits (104), Expect(5) = 3e-027
Identities = 21/43 (48%), Positives = 26/43 (60%)
Frame = -1 / +2
Query: 956 PEGDQTHVSTRVMGTYGYAAPEYVMTGHLTARSDVYSFGVVLL 828
P GD + VS + GT GY PEY G + DVYSFG+V+L
Sbjct: 683 PTGDSSTVSFGLKGTIGYIGPEYAGGGKSSTCGDVYSFGIVIL 811
Score = 43.7 bits (89), Expect(5) = 3e-027
Identities = 18/32 (56%), Positives = 22/32 (68%)
Frame = -1 / +2
Query: 1061 NAQRPVIYRDFKTSNILLDSDYTAKLSDFGLA 966
+ R +I+ D K SNILLD D TA L DFG+A
Sbjct: 566 SGSRSIIHCDVKPSNILLDDDMTAHLGDFGIA 661
Score = 40.5 bits (82), Expect(5) = 3e-027
Identities = 17/41 (41%), Positives = 25/41 (60%)
Frame = -1 / +1
Query: 1334 LPVAVKVLNKDGHQGHREWLTEVNCLGQLRHPNLVKLIGYC 1212
L VAVKVL+ D H + +L+E L ++H NLV ++ C
Sbjct: 259 LEVAVKVLDLDMHGAEKSFLSECEALRNIKHRNLVPILTAC 381
Score = 30.9 bits (61), Expect(5) = 3e-027
Identities = 10/26 (38%), Positives = 18/26 (69%)
Frame = -1 / +1
Query: 1448 ELETITKSFRVDYVLGEGGFGTVYKG 1371
+L T++F ++G GG+G+VY+G
Sbjct: 163 DLAQATQNFSESNLIGSGGYGSVYRG 240
Score = 24.0 bits (46), Expect(5) = 3e-027
Identities = 9/20 (45%), Positives = 13/20 (65%)
Frame = -1 / +2
Query: 1196 RLLVYEFMFRGSLENHLFRK 1137
+ L+YEFM G+L+ L K
Sbjct: 413 KALIYEFMPNGNLDTWLHHK 472
>gb|AY038002.1| Avena sativa isolate Pc68LrkA receptor kinase gene, complete cds
Length = 5106
Score = 57.0 bits (118), Expect(4) = 5e-026
Identities = 21/49 (42%), Positives = 33/49 (67%)
Frame = -1 / +3
Query: 1280 WLTEVNCLGQLRHPNLVKLIGYCCEDDHRLLVYEFMFRGSLENHLFRKT 1134
++ EV +G + H N+V+L+G+C E R L+YEFM SLE ++F +T
Sbjct: 4434 FINEVATIGLIHHANIVRLLGFCSEGMRRALIYEFMPNESLEKYIFSQT 4580
Score = 41.4 bits (84), Expect(4) = 5e-026
Identities = 19/48 (39%), Positives = 27/48 (56%)
Frame = -1 / +1
Query: 1046 VIYRDFKTSNILLDSDYTAKLSDFGLAKDGPEGDQTHVSTRVMGTYGY 903
+++ D K NILLD ++ K+S FGLAK + + T GT GY
Sbjct: 4687 ILHFDIKPHNILLDYNFNPKISVFGLAKLCAKDQRIVTLTAARGTMGY 4830
Score = 35.0 bits (70), Expect(4) = 5e-026
Identities = 13/27 (48%), Positives = 22/27 (81%)
Frame = -1 / +2
Query: 860 SDVYSFGVVLLELLTGRKSIDKSRPSR 780
S VYSFG+++LE+++GR++ D S S+
Sbjct: 4886 SHVYSFGMLVLEMVSGRRNSDPSTESQ 4966
Score = 35.0 bits (70), Expect(4) = 5e-026
Identities = 13/25 (52%), Positives = 18/25 (72%)
Frame = -1 / +3
Query: 1406 LGEGGFGTVYKGYIDENVRVGLKSL 1332
+G+GGFG+VYKG + V V +K L
Sbjct: 4332 VGQGGFGSVYKGELPNRVPVAVKML 4406
>gb|CN818659.1|CN818659 HRO4455_A08_A15ZS5 Lib AA070E1X Avena sativa cv. Ogle-C green leaf
Avena sativa cDNA clone HRO4455_A08_A15, mRNA sequence
Length = 831
Score = 82.2 bits (173), Expect(2) = 5e-026
Identities = 33/66 (50%), Positives = 45/66 (68%)
Frame = -1 / +3
Query: 953 EGDQTHVSTRVMGTYGYAAPEYVMTGHLTARSDVYSFGVVLLELLTGRKSIDKSRPSREQ 774
E TH+ST+V GT GY APEY M G+LT ++DVYSFGVV LE+++G+ + +
Sbjct: 123 EDGHTHISTKVAGTIGYMAPEYAMRGYLTDKADVYSFGVVALEIVSGKSNTNYRPKEDFV 302
Query: 773 SLVDWA 756
L+DWA
Sbjct: 303 YLLDWA 320
Score = 51.5 bits (106), Expect(2) = 5e-026
Identities = 20/33 (60%), Positives = 25/33 (75%)
Frame = -1 / +3
Query: 1046 VIYRDFKTSNILLDSDYTAKLSDFGLAKDGPEG 948
+++RD K SNILLD D AK+SDFGLAK +G
Sbjct: 33 IVHRDIKASNILLDKDMNAKISDFGLAKLNEDG 131
>gb|CN818925.1|CN818925 HRO4455_H03_O05ZS5 Lib AA070E1X Avena sativa cv. Ogle-C green leaf
Avena sativa cDNA clone HRO4455_H03_O05, mRNA sequence
Length = 658
Score = 46.4 bits (95), Expect(5) = 3e-024
Identities = 20/51 (39%), Positives = 30/51 (58%)
Frame = -1 / +2
Query: 1067 LHNAQRPVIYRDFKTSNILLDSDYTAKLSDFGLAKDGPEGDQTHVSTRVMG 915
L + +++ D K NILLDS++ K++DFGLAK P G+ R+ G
Sbjct: 197 LRGCEMQILHFDIKPHNILLDSNFVPKVADFGLAKLYPRGNTFCAVERLTG 349
Score = 44.1 bits (90), Expect(5) = 3e-024
Identities = 16/38 (42%), Positives = 26/38 (68%)
Frame = -1 / +2
Query: 1256 GQLRHPNLVKLIGYCCEDDHRLLVYEFMFRGSLENHLF 1143
G+++H N+ +L+G C E LVYE+M GSL+ ++F
Sbjct: 2 GRIQHVNVDRLVGICSEQMRTALVYEYMPGGSLDKYIF 115
Score = 39.6 bits (80), Expect(5) = 3e-024
Identities = 15/36 (41%), Positives = 26/36 (72%)
Frame = -1 / +3
Query: 878 GHLTARSDVYSFGVVLLELLTGRKSIDKSRPSREQS 771
G ++++SDVYSFG++LLE+ GR++ + + QS
Sbjct: 393 GVISSKSDVYSFGMLLLEMAGGRRNANPDAANSSQS 500
Score = 26.3 bits (51), Expect(5) = 3e-024
Identities = 9/24 (37%), Positives = 13/24 (54%)
Frame = -1 / +3
Query: 674 HKSCSLAFYCLSQNPKARPLMSDV 603
+K C + +C+ RP MSDV
Sbjct: 585 NKLCIVGLWCIQMKSHDRPTMSDV 656
Score = 22.6 bits (43), Expect(5) = 3e-024
Identities = 7/13 (53%), Positives = 10/13 (76%)
Frame = -1 / +3
Query: 923 VMGTYGYAAPEYV 885
++GT GY APE +
Sbjct: 342 LLGTIGYIAPEMI 380
>gb|CN820657.1|CN820657 HRO4415_H08_P15ZS5 Lib AA069E1X Avena sativa cv. Ogle-C etiolated
leaf Avena sativa cDNA clone HRO4415_H08_P15, mRNA
sequence
Length = 788
Score = 103 bits (220), Expect(2) = 6e-024
Identities = 47/117 (40%), Positives = 69/117 (58%)
Frame = -1 / +3
Query: 941 THVSTRVMGTYGYAAPEYVMTGHLTARSDVYSFGVVLLELLTGRKSIDKSRPSREQSLVD 762
+ +S + + Y APE + + RSDVYSFGVV+LELLTGRK D SRP EQ LV
Sbjct: 75 SQLSGSLRALFHYEAPEVHESRTFSDRSDVYSFGVVMLELLTGRKPYDSSRPRAEQHLVR 254
Query: 761 WALPKLNDKRRLLQIIDPRLEGQYSARAAHKSCSLAFYCLSQNPKARPLMSDVVETL 591
WA +L + +++DP + GQ S +A + + C+ P+ RP +S++V+ L
Sbjct: 255 WASTQLYGIDTISKMVDPCIRGQCSEKALSRFADVISRCIQHEPEFRPPISEIVQDL 425
Score = 23.1 bits (44), Expect(2) = 6e-024
Identities = 10/22 (45%), Positives = 16/22 (72%)
Frame = -1 / +3
Query: 1031 FKTSNILLDSDYTAKLSDFGLA 966
F+ S ILL+S + ++S+ GLA
Sbjct: 3 FEPSIILLNSTLSVQISECGLA 68
>emb|AJ629310.1| Avena strigosa partial s5.6 gene for receptor-like-kinase
Length = 1410
Score = 44.6 bits (91), Expect(4) = 2e-023
Identities = 17/28 (60%), Positives = 22/28 (78%)
Frame = -1 / -1
Query: 1046 VIYRDFKTSNILLDSDYTAKLSDFGLAK 963
+I+RD K +NILLD D+ A + DFGLAK
Sbjct: 114 IIHRDVKAANILLDEDFEAVVGDFGLAK 31
Score = 43.7 bits (89), Expect(4) = 2e-023
Identities = 18/43 (41%), Positives = 25/43 (58%)
Frame = -1 / -3
Query: 1274 TEVNCLGQLRHPNLVKLIGYCCEDDHRLLVYEFMFRGSLENHL 1146
TEV + H NL++L G+C RLLVY +M GS+ + L
Sbjct: 484 TEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASRL 356
Score = 43.2 bits (88), Expect(4) = 2e-023
Identities = 18/43 (41%), Positives = 26/43 (60%)
Frame = -1 / -3
Query: 1460 FTLFELETITKSFRVDYVLGEGGFGTVYKGYIDENVRVGLKSL 1332
F+L EL+ + +F +LG GGFG VYKG + + V +K L
Sbjct: 652 FSLRELQVASDNFNNKNILGRGGFGKVYKGRLADGTLVAVKRL 524
Score = 38.2 bits (77), Expect(4) = 2e-023
Identities = 16/29 (55%), Positives = 20/29 (68%)
Frame = -1 / -1
Query: 1127 PLPWGTRMSIALGAAKGLACLHNAQRPVI 1041
PL W TR IALG+A+GL+ LH+ P I
Sbjct: 198 PLDWDTRRRIALGSARGLSYLHDHCDPKI 112
Database: Avena_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:15 PM
Number of letters in database: 4,702,463
Number of sequences in database: 8143
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 18,573,471
Number of Sequences: 8143
Number of extensions: 291990
Number of successful extensions: 1867
Number of sequences better than 1.0e-020: 20
length of database: 1,567,487
effective HSP length: 45
effective length of database: 1,201,052
effective search space used: 605330208
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)