TBLASTX 2.2.10 [Oct-19-2004]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 2419155.2.3
         (1354 letters)

Database: Avena_nucl_with_EST.fasta 
           8143 sequences; 4,702,463 total letters



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|X79993.1|ASMAP1  A.sativa Asmap1 mRNA                          94   3e-052

>emb|X79993.1|ASMAP1 A.sativa Asmap1 mRNA
          Length = 1520

 Score = 94.1 bits (199), Expect(5) = 3e-052
 Identities = 34/65 (52%), Positives = 46/65 (70%)
 Frame = +2 / +2

                                                                       
Query: 722 THEVVTLWYRAPEILLGARQYSTPVDVWSVGCIFAEMVNQKPLFPGDSEIDELFKIFRIL 901
           T  VVT WYRAPE+LL +  YS  +DVWSVGCIF E++N+ PLFPG   + ++  I  ++
Sbjct: 749 TEYVVTRWYRAPELLLNSTDYSAAIDVWSVGCIFMELINRAPLFPGRDHMHQMRLITEVI 928

                
Query: 902 GTPNE 916
           GTP +
Sbjct: 929 GTPTD 943




 Score = 56.1 bits (116), Expect(5) = 3e-052
 Identities = 24/61 (39%), Positives = 36/61 (59%)
 Frame = +2 / +2

                                                                       
Query: 269 IGEGTYGVVYKALDKATNETIALKKIRLEQEDEGVPSTAIREISLLKEMNHGNIVRLHDV 448
           IG G YG+V   ++  T E +A+KKI    ++       +REI LL+ ++H NIV L DV
Sbjct: 293 IGRGAYGIVCSVMNFETREMVAIKKIANAFDNNMDAKRTLREIKLLRHLDHENIVGLRDV 472

            
Query: 449 V 451
           +
Sbjct: 473 I 475




 Score = 53.3 bits (110), Expect(5) = 3e-052
 Identities = 19/30 (63%), Positives = 25/30 (83%)
 Frame = +2 / +2

                                         
Query: 560 YLYQILRGVAYCHSHRVLHRDLKPQNLLID 649
           +LYQ+LRG+ Y HS  V+HRDLKP NLL++
Sbjct: 593 FLYQLLRGLKYIHSANVIHRDLKPSNLLLN 682




 Score = 49.6 bits (102), Expect(5) = 3e-052
 Identities = 20/52 (38%), Positives = 30/52 (57%)
 Frame = +2 / +2

                                                                
Query: 965  PRWQAQDLATVVPNLDPAGLDLLSKMLRYEPSKRITARQALEHEYFKDLEVV 1120
            P++  +      P + PA LDL+ +ML + P +RIT  +ALEH Y + L  V
Sbjct: 998  PQFPRRPFPGQFPKVQPAALDLIERMLTFNPLQRITVEEALEHPYLERLHDV 1153




 Score = 22.1 bits (42), Expect(5) = 3e-052
 Identities = 8/10 (80%), Positives = 9/10 (90%)
 Frame = +2 / +2

                     
Query: 665 LKLADFGLAR 694
           LK+ DFGLAR
Sbjct: 695 LKICDFGLAR 724



  Database: Avena_nucl_with_EST.fasta
    Posted date:  Feb 7, 2006  2:15 PM
  Number of letters in database: 4,702,463
  Number of sequences in database:  8143
  
Lambda     K      H
   0.318    0.134    0.401 


Matrix: BLOSUM62
Number of Hits to DB: 12,913,372
Number of Sequences: 8143
Number of extensions: 184439
Number of successful extensions: 1053
Number of sequences better than 1.0e-020: 1
length of database: 1,567,487
effective HSP length: 44
effective length of database: 1,209,195
effective search space used: 490933170
frameshift window, decay const: 40,  0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)