TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2404928.2.2
(1151 letters)
Database: Avena_nucl_with_EST.fasta
8143 sequences; 4,702,463 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CN815408.1|CN815408 HRO4509_C11_E21ZS5 Lib AA071E1X Aven... 532 e-152
gb|CN816540.1|CN816540 HRO4521_H08_O15ZS5 Lib AA071E1X Aven... 427 e-120
gb|CN819629.1|CN819629 HRO4402_D05_G10ZS5 Lib AA069E1X Aven... 426 e-120
gb|CN815415.1|CN815415 HRO4509_D07_G13ZS5 Lib AA071E1X Aven... 271 1e-073
>gb|CN815408.1|CN815408 HRO4509_C11_E21ZS5 Lib AA071E1X Avena sativa cv. Ogle-C root Avena
sativa cDNA clone HRO4509_C11_E21, mRNA sequence
Length = 894
Score = 532 bits (1155), Expect = e-152
Identities = 216/251 (86%), Positives = 239/251 (95%)
Frame = -3 / +2
Query: 1062 RKGTALVKLAKTSKDFDIAIETYQKALTEHRNPDTLKKLNEAERAKKELEQQEYYDPKLA 883
+KGTAL KLAK SKD+DIAIET+QKALTEHRNPDTLK+LNEAE+AKK+LEQQEYYDPK+A
Sbjct: 11 KKGTALAKLAKNSKDYDIAIETFQKALTEHRNPDTLKRLNEAEKAKKDLEQQEYYDPKVA 190
Query: 882 DEEREKGNEFFKEQKYPEAIKHYTEALKRNPKDPRVYSNRAACYTKLGAMPEGLKDAEKC 703
DEEREKGNE FK+QKYPEAIKHY EAL+RNPKD +VYSNRAACYTKLGAMPEGLKDAEKC
Sbjct: 191 DEEREKGNEMFKQQKYPEAIKHYNEALRRNPKDVKVYSNRAACYTKLGAMPEGLKDAEKC 370
Query: 702 LELDPTFTKGYTRKGAIQFFMKEYDKAMETYQAGLKHDPKNQELLDGVRRCIEQINKANR 523
+ELDPTF+KGYTRKGAIQFFMKE++KAMETYQAGLKHDP NQELLDG+RRCIEQINKANR
Sbjct: 371 IELDPTFSKGYTRKGAIQFFMKEHEKAMETYQAGLKHDPNNQELLDGIRRCIEQINKANR 550
Query: 522 GEISQDELQERQNKAMQDPEIQNILTDPIMRQVLNDFQENPRAAQEHLKNPGVMQKIQKL 343
G+ISQ++LQE+Q+KAMQDPEIQ ILTDPIMRQVL DFQENP AAQ HLK+PGV QKIQKL
Sbjct: 551 GDISQEDLQEKQSKAMQDPEIQGILTDPIMRQVLMDFQENPSAAQHHLKDPGVAQKIQKL 730
Query: 342 VSAGIVQMR*S 310
++AGIVQ R*S
Sbjct: 731 INAGIVQTR*S 763
Score = 261 bits (564), Expect(2) = 6e-076
Identities = 117/179 (65%), Positives = 135/179 (75%)
Frame = +1 / -3
Query: 298 ASCA*SSHLDYPSTYKLLNLLHNSRVLQVLLGRPWVLLEII*HLSHDRVGKNVLDLWVLH 477
+S A* S LDY S Y+LLNLL N+RVL+++L VLLEI +LSHDRVGK+ LD WVLH
Sbjct: 775 SSFA*LSRLDYSSVYELLNLLCNTRVLKMMLSSTRVLLEIHQYLSHDRVGKDSLDFWVLH 596
Query: 478 SFVLSFLQFVLTYFTSVSLVNLFNAPPNTIKQFLVFRVMLQASLIGFHGLVIFFHEELNC 657
SF L L +LTY T VSLVNL N PP TIKQFLV R++LQ SL+ FH L++FFHE+LNC
Sbjct: 595 SFTLFLL*VLLTYITPVSLVNLLNTPPYTIKQFLVIRIVLQPSLVSFHCLLMFFHEKLNC 416
Query: 658 TFPCVPFSEGGV*FKTLLCIFKTFRHGS*LGVAGSPIAVNPRILWVSLESLRVVFYCFW 834
TF C+PF EG V* TL IFKTFRHGS LGVA SPIAV+ IL V ESL V+ YCFW
Sbjct: 415 TFSCIPFGEGWV*LNTLFSIFKTFRHGSQLGVACSPIAVHLNILRVPPESLIVMLYCFW 239
Score = 257 bits (556), Expect(2) = 7e-072
Identities = 130/215 (60%), Positives = 144/215 (66%)
Frame = +3 / -2
Query: 414 NHLAPVS**GR*ECSGSLGLA*LCSVFLAIRPDLFHLC*PC*FVQCTS*HHQAVPGFSGH 593
N PV+**GR* G LG A*L SV PDL+H C*PC* Q TS +HQAV G+S
Sbjct: 659 NPSIPVA**GR*GFPGFLGPA*LYSVSPVSPPDLYHPC*PC*SAQYTSLYHQAVLGYSDR 480
Query: 594 ASGQPDRFPWPCHILS*RIELHLSLCTL**RWGLVQDTSLHL*DLQAWLLTWCSRQPYCC 773
AS Q +FP P H+LS*+ ELHL L TL R GL Q T HL*DLQAWL TWCS QPYCC
Sbjct: 479 ASTQLGKFPLPSHVLS*KTELHLFLYTLWRRLGLAQYTFQHL*DLQAWLPTWCSMQPYCC 300
Query: 774 KP*DPLGFS*EPPCSVLLLLGIFAP*RTRCLSLSPHLLILDHSTLVAPTLFSLSQPHSTF 953
P* P G S*EP C+ LLLL F * + LSLSPHLL H+TLVA +L SQPH F
Sbjct: 299 TP*HP*GSS*EPHCNALLLLDTFVA*TSHYLSLSPHLLPSGHNTLVALSLSLPSQPHLAF 120
Query: 954 *ECLGSDAQLEPSGRSRWQYQNP*RS*QA*LELFL 1058
*EC SDAQLEPSG+SRWQY++ S* E FL
Sbjct: 119 *ECQDSDAQLEPSGKSRWQYRSLWSS*PVWPEQFL 15
Score = 237 bits (512), Expect(2) = 2e-067
Identities = 119/190 (62%), Positives = 139/190 (73%)
Frame = -1 / +3
Query: 971 GTQTLLKS*MRLRERKKSWSNKSTMIQN*QMRRERKATSSSRSKNTQKQ*NTTRRLSRET 792
G TL K *MRLR ++K+ SNKS M + *QMRRERK S +K+ QKQ*+ T RLS T
Sbjct: 102 GILTLSKG*MRLRRQRKT*SNKSIMTRR*QMRRERKVMRCSSNKSIQKQ*SITMRLSGGT 281
Query: 791 QRILGFTAIGLPATPS*EPCLKVLKMQRSVLN*TPPSLKGTQGKVQFNSS*KNMTRPWKP 612
R+L TAIGL ATPS EPCLKVLKM +SVL+*T PS KG Q KVQF+ S*KNM R WK
Sbjct: 282 LRMLRCTAIGLHATPSWEPCLKVLKMLKSVLS*TQPSPKGIQEKVQFSFS*KNMRRQWKL 461
Query: 611 IRLA*SMTRKTRNCLMVLGGALNKLTRLTEVK*VRTNCKKDRTKLCKTQRSRTFLPTLS* 432
+L *S R T+NCLMV GG L++LTRLT V *VR +++R KLC+TQ+SR LPTLS
Sbjct: 462 TKLG*STIRITKNCLMV*GGVLSRLTRLTGVI*VRRTYRRNRVKLCRTQKSRESLPTLSC 641
Query: 431 DRC*MISRRT 402
DR * ISRRT
Sbjct: 642 DRY*WISRRT 671
Score = 233 bits (504), Expect(2) = 2e-094
Identities = 105/166 (63%), Positives = 115/166 (69%)
Frame = +2 / -1
Query: 248 HVN*QSQAQGTNKQVQSHRVPDHLIWTIPALTSF*IFCITPGFFRCSWAALGFSWKSFST 427
H Q ++K+ + D+L+WTIPA SF*IFC TPG R AALGFSWKS +T
Sbjct: 825 HNRAQEHQTSSHKRFCHLALLDYLVWTIPAFMSF*IFCATPGSLR*C*AALGFSWKSINT 646
Query: 428 CLMIGSVRMFWISGSCIALFCLSCNXXXXXXXXXXXXXXXMHLLTPSSSSWFFGSCFRPA 607
C MIGSVR+ WISGSCIAL C SC +HLL PSSSSW FGSCF PA
Sbjct: 645 CRMIGSVRIPWISGSCIALLCFSCKSS*LISPLLALLICSIHLLIPSSSSWLFGSCFNPA 466
Query: 608 **VSMALSYSFMKN*IAPFLVYPLVKVGSSSRHFSASLRPSGMAPN 745
*VS+A S SFMKN*IAPFLVYPL KVGSSS HFSASLRPSGMAPN
Sbjct: 465 W*VSIAFSCSFMKN*IAPFLVYPLEKVGSSSIHFSASLRPSGMAPN 328
Score = 135 bits (290), Expect(3) = 8e-062
Identities = 65/106 (61%), Positives = 78/106 (73%)
Frame = -2 / +1
Query: 745 VRSHA*RS*RCREVS*TRPHLH*RVHKERCNSILHERI*QGHGNLSGWPEA*PEKPGTA* 566
V SHA*RS*RC +V * RP+L RV+K+RCNS+ HER *+G+GNL W EA E P TA*
Sbjct: 328 VGSHA*RS*RC*KVY*ARPNLLQRVYKKRCNSVFHERT*EGNGNLPSWVEARSE*PRTA* 507
Query: 565 WC*EVH*TN*QG*QR*NKSGRIARKTEQSYARPRDPEHSYRPYHET 428
W EV+* +*QG*Q * KSG + +TE SYA PR+P + YRPYH T
Sbjct: 508 WYKEVY*AD*QG*QG*YKSGGLTGETE*SYAGPRNPGNPYRPYHAT 645
Score = 127 bits (273), Expect(2) = 2e-094
Identities = 60/88 (68%), Positives = 62/88 (70%)
Frame = +2 / -1
Query: 803 RASV*CFIASGYFCSLKNSLPFSLSSSANFGS*YXXXXXXXXXXXXXXXXXRVSGFRCSV 982
RAS+*CFIASGYFC L SLPFSLSSSA FGS*Y RVSGFRCSV
Sbjct: 270 RASL*CFIASGYFCCLNISLPFSLSSSATFGS*YSCCSKSFFAFSASFSLLRVSGFRCSV 91
Query: 983 RAFW*VSMAISKSLEVLASLTRAVPFLV 1066
RAFW VSMAIS SLE LASL RAVPF +
Sbjct: 90 RAFWKVSMAIS*SLEFLASLARAVPFFL 7
Score = 106 bits (227), Expect(3) = 8e-062
Identities = 54/92 (58%), Positives = 66/92 (71%)
Frame = -2 / +1
Query: 1066 DKKRNSSSQAC*DL*GF*YCHRDLPEGSN*ASEPRHS*KVE*G*ESEKRVGATRVL*SKI 887
+++RN S Q *+L YCHRD PEGSN*ASE HS K +*G*E ++R+ ATRVL* +
Sbjct: 7 EEERNCSGQTG*ELQRLRYCHRDFPEGSN*ASES*HSQKAK*G*EGKERLRATRVL*PEG 186
Query: 886 SR*GERERQRVLQGAKIPRSNKTLHGGSQEKP 791
SR*GERER +Q K+ RSNK L GSQE+P
Sbjct: 187 SR*GERER**DVQATKVSRSNKALQ*GSQEEP 282
Score = 39.1 bits (79), Expect(2) = 6e-076
Identities = 20/35 (57%), Positives = 24/35 (68%)
Frame = +1 / -3
Query: 955 KSVWVPMLS*SLLVGLDGNIKILRGLSKLD*SCSF 1059
+SV +PMLS*SLL LDGNI + LS+ S SF
Sbjct: 118 ESVRIPMLS*SLLESLDGNIVVFGVLSQFGQSSSF 14
Score = 34.1 bits (68), Expect(2) = 2e-067
Identities = 11/23 (47%), Positives = 17/23 (73%)
Frame = -2 / +1
Query: 370 WSYAKDSEACKCWDSPNEMIRHT 302
W +DSEA K W+SPNE+++ +
Sbjct: 703 WCCTEDSEAHKRWNSPNEIVKQS 771
Score = 29.0 bits (57), Expect(3) = 8e-062
Identities = 16/24 (66%), Positives = 17/24 (70%)
Frame = -1 / +3
Query: 377 RTLELCKRFRSL*VLG*SK*DDQA 306
RTL L +RFRS * L *SK D QA
Sbjct: 696 RTLVLHRRFRSS*TLE*SKRDSQA 767
Score = 29.0 bits (57), Expect(2) = 7e-072
Identities = 13/18 (72%), Positives = 14/18 (77%)
Frame = +3 / -2
Query: 303 VCLIISFGLSQHLQASES 356
+CL ISFGL Q L ASES
Sbjct: 770 LCLTISFGLFQRL*ASES 717
>gb|CN816540.1|CN816540 HRO4521_H08_O15ZS5 Lib AA071E1X Avena sativa cv. Ogle-C root Avena
sativa cDNA clone HRO4521_H08_O15, mRNA sequence
Length = 771
Score = 427 bits (926), Expect = e-120
Identities = 172/200 (86%), Positives = 190/200 (95%)
Frame = -3 / +2
Query: 909 QEYYDPKLADEEREKGNEFFKEQKYPEAIKHYTEALKRNPKDPRVYSNRAACYTKLGAMP 730
+EYYDPK+ADEEREKGNE FK+QKYPEAIKHY EAL+RNPKD +VYSNRAACYTKLGAMP
Sbjct: 8 REYYDPKVADEEREKGNEMFKQQKYPEAIKHYNEALRRNPKDVKVYSNRAACYTKLGAMP 187
Query: 729 EGLKDAEKCLELDPTFTKGYTRKGAIQFFMKEYDKAMETYQAGLKHDPKNQELLDGVRRC 550
EGLKDAEKC+ELDPTF+KGYTRKGAIQFFMKE++KAMETYQAGLKHDP NQELLDG+RRC
Sbjct: 188 EGLKDAEKCIELDPTFSKGYTRKGAIQFFMKEHEKAMETYQAGLKHDPNNQELLDGIRRC 367
Query: 549 IEQINKANRGEISQDELQERQNKAMQDPEIQNILTDPIMRQVLNDFQENPRAAQEHLKNP 370
IEQINKANRG+ISQ++LQE+Q+KAMQDPEIQ ILTDPIMRQVL DFQENP AAQ HLK+P
Sbjct: 368 IEQINKANRGDISQEDLQEKQSKAMQDPEIQGILTDPIMRQVLMDFQENPSAAQHHLKDP 547
Query: 369 GVMQKIQKLVSAGIVQMR*S 310
GV QKIQKL++AGIVQ R*S
Sbjct: 548 GVAQKIQKLINAGIVQTR*S 607
Score = 262 bits (567), Expect = 7e-071
Identities = 115/179 (64%), Positives = 136/179 (75%)
Frame = +1 / -3
Query: 298 ASCA*SSHLDYPSTYKLLNLLHNSRVLQVLLGRPWVLLEII*HLSHDRVGKNVLDLWVLH 477
+S A* S LDY S Y+LLNLL N+R+L+++L VLLEI +LSHDR+GK+ LD WVLH
Sbjct: 619 SSFA*LSRLDYSSVYELLNLLCNTRILKMMLSCTRVLLEIHQYLSHDRIGKDALDFWVLH 440
Query: 478 SFVLSFLQFVLTYFTSVSLVNLFNAPPNTIKQFLVFRVMLQASLIGFHGLVIFFHEELNC 657
SF L L +LTY T VSLVNL N PP TIKQFLV R++LQ SL+ FH L++FFHE+LNC
Sbjct: 439 SFTLFLL*VLLTYITPVSLVNLLNTPPYTIKQFLVIRIVLQPSLVSFHCLLMFFHEKLNC 260
Query: 658 TFPCVPFSEGGV*FKTLLCIFKTFRHGS*LGVAGSPIAVNPRILWVSLESLRVVFYCFW 834
TF C+PF EG V*F TL IFKTFRHGS LGVA SP+AV+ IL V ESL V+ YCFW
Sbjct: 259 TFSCIPFGEGWV*FNTLFSIFKTFRHGSQLGVACSPVAVHLNILRVPPESLIVMLYCFW 83
Score = 235 bits (508), Expect(2) = 2e-076
Identities = 106/166 (63%), Positives = 115/166 (69%)
Frame = +2 / -1
Query: 248 HVN*QSQAQGTNKQVQSHRVPDHLIWTIPALTSF*IFCITPGFFRCSWAALGFSWKSFST 427
H Q ++K+ + D+L+WTIPA SF*IFC TPG R AALGFSWKS +T
Sbjct: 669 HNRAQEHQTSSHKRFCHLALLDYLVWTIPAFMSF*IFCATPGSLR*C*AALGFSWKSINT 490
Query: 428 CLMIGSVRMFWISGSCIALFCLSCNXXXXXXXXXXXXXXXMHLLTPSSSSWFFGSCFRPA 607
C MIGSVRM WISGSCIAL C SC +HLL PSSSSW FGSCF PA
Sbjct: 489 CRMIGSVRMPWISGSCIALLCFSCKSS*LISPLLALLICSIHLLIPSSSSWLFGSCFNPA 310
Query: 608 **VSMALSYSFMKN*IAPFLVYPLVKVGSSSRHFSASLRPSGMAPN 745
*VS+A S SFMKN*IAPFLVYPL KVGSSS HFSASLRPSGMAPN
Sbjct: 309 W*VSIAFSCSFMKN*IAPFLVYPLEKVGSSSIHFSASLRPSGMAPN 172
Score = 226 bits (488), Expect = 5e-060
Identities = 120/200 (60%), Positives = 138/200 (69%)
Frame = -1 / +3
Query: 905 STMIQN*QMRRERKATSSSRSKNTQKQ*NTTRRLSRETQRILGFTAIGLPATPS*EPCLK 726
S M + *QMRRERK S +K+ QKQ*+ T RLS T R+L TA GL ATPS EPCLK
Sbjct: 12 SIMTRR*QMRRERKVMRCSSNKSIQKQ*SITMRLSGGTLRMLRCTATGLHATPSWEPCLK 191
Query: 725 VLKMQRSVLN*TPPSLKGTQGKVQFNSS*KNMTRPWKPIRLA*SMTRKTRNCLMVLGGAL 546
VLKM +SVLN*T PS KG Q KVQF+ S*KNM R WK +L *S R T+NCLMV GG L
Sbjct: 192 VLKMLKSVLN*TQPSPKGIQEKVQFSFS*KNMRRQWKLTKLG*STIRITKNCLMV*GGVL 371
Query: 545 NKLTRLTEVK*VRTNCKKDRTKLCKTQRSRTFLPTLS*DRC*MISRRTQGRPRST*RTLE 366
++LTRLT V *VR +++R KLC+TQ+SR LP LS DR * ISRRT + R L
Sbjct: 372 SRLTRLTGVI*VRRTYRRNRVKLCRTQKSRASLPILSCDRY*WISRRTLVQLSIILRILV 551
Query: 365 LCKRFRSL*VLG*SK*DDQA 306
L +RFRS * L *SK D QA
Sbjct: 552 LHRRFRSS*TLE*SKRDSQA 611
Score = 197 bits (425), Expect(2) = 7e-054
Identities = 99/164 (60%), Positives = 109/164 (66%)
Frame = +3 / -2
Query: 414 NHLAPVS**GR*ECSGSLGLA*LCSVFLAIRPDLFHLC*PC*FVQCTS*HHQAVPGFSGH 593
N PV+** R* C G LG A*L SV PDL+H C*PC* Q TS +HQAV G+S
Sbjct: 503 NPSIPVA**DR*GCPGFLGPA*LYSVSPVSPPDLYHPC*PC*SAQYTSLYHQAVLGYSDR 324
Query: 594 ASGQPDRFPWPCHILS*RIELHLSLCTL**RWGLVQDTSLHL*DLQAWLLTWCSRQPYCC 773
AS Q +FP P H+LS*+ ELHL L TL R GLVQ T HL*DLQAWL TWCS QP CC
Sbjct: 323 ASTQLGKFPLPSHVLS*KTELHLFLYTLWRRLGLVQYTFQHL*DLQAWLPTWCSMQPCCC 144
Query: 774 KP*DPLGFS*EPPCSVLLLLGIFAP*RTRCLSLSPHLLILDHST 905
P* P G S*EP C+ LLLL F * + LSLSPHLL H+T
Sbjct: 143 TP*HP*GSS*EPHCNALLLLDTFVA*TSHYLSLSPHLLPSGHNT 12
Score = 137 bits (294), Expect(3) = 2e-045
Identities = 66/106 (62%), Positives = 78/106 (73%)
Frame = -2 / +1
Query: 745 VRSHA*RS*RCREVS*TRPHLH*RVHKERCNSILHERI*QGHGNLSGWPEA*PEKPGTA* 566
V SHA*RS*RC +V *TRP+L RV+K+RCNS+ HER *+G+GNL W EA E P TA*
Sbjct: 172 VGSHA*RS*RC*KVY*TRPNLLQRVYKKRCNSVFHERT*EGNGNLPSWVEARSE*PRTA* 351
Query: 565 WC*EVH*TN*QG*QR*NKSGRIARKTEQSYARPRDPEHSYRPYHET 428
W EV+* +*QG*Q * KSG + +TE SYA PR+P H YR YH T
Sbjct: 352 WYKEVY*AD*QG*QG*YKSGGLTGETE*SYAGPRNPGHPYRSYHAT 489
Score = 66.6 bits (139), Expect(2) = 2e-076
Identities = 29/34 (85%), Positives = 30/34 (88%)
Frame = +2 / -1
Query: 803 RASV*CFIASGYFCSLKNSLPFSLSSSANFGS*Y 904
RAS+*CFIASGYFC L SLPFSLSSSA FGS*Y
Sbjct: 114 RASL*CFIASGYFCCLNISLPFSLSSSATFGS*Y 13
Score = 44.6 bits (91), Expect(3) = 2e-045
Identities = 23/38 (60%), Positives = 27/38 (71%)
Frame = -2 / +1
Query: 904 VL*SKISR*GERERQRVLQGAKIPRSNKTLHGGSQEKP 791
VL* + SR*GERER +Q K+ RSNK L GSQE+P
Sbjct: 13 VL*PEGSR*GERER**DVQATKVSRSNKALQ*GSQEEP 126
Score = 34.1 bits (68), Expect(3) = 2e-045
Identities = 11/23 (47%), Positives = 17/23 (73%)
Frame = -2 / +1
Query: 370 WSYAKDSEACKCWDSPNEMIRHT 302
W +DSEA K W+SPNE+++ +
Sbjct: 547 WCCTEDSEAHKRWNSPNEIVKQS 615
Score = 29.0 bits (57), Expect(2) = 7e-054
Identities = 13/18 (72%), Positives = 14/18 (77%)
Frame = +3 / -2
Query: 303 VCLIISFGLSQHLQASES 356
+CL ISFGL Q L ASES
Sbjct: 614 LCLTISFGLFQRL*ASES 561
>gb|CN819629.1|CN819629 HRO4402_D05_G10ZS5 Lib AA069E1X Avena sativa cv. Ogle-C etiolated
leaf Avena sativa cDNA clone HRO4402_D05_G10, mRNA
sequence
Length = 766
Score = 426 bits (925), Expect = e-120
Identities = 172/199 (86%), Positives = 189/199 (94%)
Frame = -3 / +3
Query: 906 EYYDPKLADEEREKGNEFFKEQKYPEAIKHYTEALKRNPKDPRVYSNRAACYTKLGAMPE 727
EYYDPK+ADEEREKGNE FK+QKYPEAIKHY EAL+RNPKD +VYSNRAACYTKLGAMPE
Sbjct: 3 EYYDPKVADEEREKGNEMFKQQKYPEAIKHYNEALRRNPKDVKVYSNRAACYTKLGAMPE 182
Query: 726 GLKDAEKCLELDPTFTKGYTRKGAIQFFMKEYDKAMETYQAGLKHDPKNQELLDGVRRCI 547
GLKDAEKC+ELDPTF+KGYTRKGAIQFFMKE++KAMETYQAGLKHDP NQELLDG+RRCI
Sbjct: 183 GLKDAEKCIELDPTFSKGYTRKGAIQFFMKEHEKAMETYQAGLKHDPNNQELLDGIRRCI 362
Query: 546 EQINKANRGEISQDELQERQNKAMQDPEIQNILTDPIMRQVLNDFQENPRAAQEHLKNPG 367
EQINKANRG+ISQ++LQE+Q+KAMQDPEIQ ILTDPIMRQVL DFQENP AAQ HLK+PG
Sbjct: 363 EQINKANRGDISQEDLQEKQSKAMQDPEIQGILTDPIMRQVLMDFQENPSAAQHHLKDPG 542
Query: 366 VMQKIQKLVSAGIVQMR*S 310
V QKIQKL++AGIVQ R*S
Sbjct: 543 VAQKIQKLINAGIVQTR*S 599
Score = 261 bits (564), Expect = 2e-070
Identities = 117/179 (65%), Positives = 135/179 (75%)
Frame = +1 / -3
Query: 298 ASCA*SSHLDYPSTYKLLNLLHNSRVLQVLLGRPWVLLEII*HLSHDRVGKNVLDLWVLH 477
+S A* S LDY S Y+LLNLL N+RVL+++L VLLEI +LSHDRVGK+ LD WVLH
Sbjct: 611 SSFA*LSRLDYSSVYELLNLLCNTRVLKMMLSSTRVLLEIHQYLSHDRVGKDSLDFWVLH 432
Query: 478 SFVLSFLQFVLTYFTSVSLVNLFNAPPNTIKQFLVFRVMLQASLIGFHGLVIFFHEELNC 657
SF L L +LTY T VSLVNL N PP TIKQFLV R++LQ SL+ FH L++FFHE+LNC
Sbjct: 431 SFTLFLL*VLLTYITPVSLVNLLNTPPYTIKQFLVIRIVLQPSLVSFHCLLMFFHEKLNC 252
Query: 658 TFPCVPFSEGGV*FKTLLCIFKTFRHGS*LGVAGSPIAVNPRILWVSLESLRVVFYCFW 834
TF C+PF EG V* TL IFKTFRHGS LGVA SPIAV+ IL V ESL V+ YCFW
Sbjct: 251 TFSCIPFGEGWV*LNTLFSIFKTFRHGSQLGVACSPIAVHLNILRVPPESLIVMLYCFW 75
Score = 233 bits (504), Expect(2) = 6e-076
Identities = 105/166 (63%), Positives = 115/166 (69%)
Frame = +2 / -1
Query: 248 HVN*QSQAQGTNKQVQSHRVPDHLIWTIPALTSF*IFCITPGFFRCSWAALGFSWKSFST 427
H Q ++K+ + D+L+WTIPA SF*IFC TPG R AALGFSWKS +T
Sbjct: 661 HNRAQEHQTSSHKRFCHLALLDYLVWTIPAFMSF*IFCATPGSLR*C*AALGFSWKSINT 482
Query: 428 CLMIGSVRMFWISGSCIALFCLSCNXXXXXXXXXXXXXXXMHLLTPSSSSWFFGSCFRPA 607
C MIGSVR+ WISGSCIAL C SC +HLL PSSSSW FGSCF PA
Sbjct: 481 CRMIGSVRIPWISGSCIALLCFSCKSS*LISPLLALLICSIHLLIPSSSSWLFGSCFNPA 302
Query: 608 **VSMALSYSFMKN*IAPFLVYPLVKVGSSSRHFSASLRPSGMAPN 745
*VS+A S SFMKN*IAPFLVYPL KVGSSS HFSASLRPSGMAPN
Sbjct: 301 W*VSIAFSCSFMKN*IAPFLVYPLEKVGSSSIHFSASLRPSGMAPN 164
Score = 214 bits (462), Expect(2) = 2e-060
Identities = 107/169 (63%), Positives = 124/169 (73%)
Frame = -1 / +1
Query: 908 KSTMIQN*QMRRERKATSSSRSKNTQKQ*NTTRRLSRETQRILGFTAIGLPATPS*EPCL 729
KS M + *QMRRERK S +K+ QKQ*+ T RLS T R+L TAIGL ATPS EPCL
Sbjct: 1 KSIMTRR*QMRRERKVMRCSSNKSIQKQ*SITMRLSGGTLRMLRCTAIGLHATPSWEPCL 180
Query: 728 KVLKMQRSVLN*TPPSLKGTQGKVQFNSS*KNMTRPWKPIRLA*SMTRKTRNCLMVLGGA 549
KVLKM +SVL+*T PS KG Q KVQF+ S*KNM R WK +L *S R T+NCLMV GG
Sbjct: 181 KVLKMLKSVLS*TQPSPKGIQEKVQFSFS*KNMRRQWKLTKLG*STIRITKNCLMV*GGV 360
Query: 548 LNKLTRLTEVK*VRTNCKKDRTKLCKTQRSRTFLPTLS*DRC*MISRRT 402
L++LTRLT V *VR +++R KLC+TQ+SR LPTLS DR * ISRRT
Sbjct: 361 LSRLTRLTGVI*VRRTYRRNRVKLCRTQKSRESLPTLSCDRY*WISRRT 507
Score = 199 bits (430), Expect(2) = 1e-054
Identities = 100/165 (60%), Positives = 110/165 (66%)
Frame = +3 / -2
Query: 414 NHLAPVS**GR*ECSGSLGLA*LCSVFLAIRPDLFHLC*PC*FVQCTS*HHQAVPGFSGH 593
N PV+**GR* G LG A*L SV PDL+H C*PC* Q TS +HQAV G+S
Sbjct: 495 NPSIPVA**GR*GFPGFLGPA*LYSVSPVSPPDLYHPC*PC*SAQYTSLYHQAVLGYSDR 316
Query: 594 ASGQPDRFPWPCHILS*RIELHLSLCTL**RWGLVQDTSLHL*DLQAWLLTWCSRQPYCC 773
AS Q +FP P H+LS*+ ELHL L TL R GL Q T HL*DLQAWL TWCS QPYCC
Sbjct: 315 ASTQLGKFPLPSHVLS*KTELHLFLYTLWRRLGLAQYTFQHL*DLQAWLPTWCSMQPYCC 136
Query: 774 KP*DPLGFS*EPPCSVLLLLGIFAP*RTRCLSLSPHLLILDHSTL 908
P* P G S*EP C+ LLLL F * + LSLSPHLL H+TL
Sbjct: 135 TP*HP*GSS*EPHCNALLLLDTFVA*TSHYLSLSPHLLPSGHNTL 1
Score = 135 bits (290), Expect(3) = 5e-044
Identities = 65/106 (61%), Positives = 78/106 (73%)
Frame = -2 / +2
Query: 745 VRSHA*RS*RCREVS*TRPHLH*RVHKERCNSILHERI*QGHGNLSGWPEA*PEKPGTA* 566
V SHA*RS*RC +V * RP+L RV+K+RCNS+ HER *+G+GNL W EA E P TA*
Sbjct: 164 VGSHA*RS*RC*KVY*ARPNLLQRVYKKRCNSVFHERT*EGNGNLPSWVEARSE*PRTA* 343
Query: 565 WC*EVH*TN*QG*QR*NKSGRIARKTEQSYARPRDPEHSYRPYHET 428
W EV+* +*QG*Q * KSG + +TE SYA PR+P + YRPYH T
Sbjct: 344 WYKEVY*AD*QG*QG*YKSGGLTGETE*SYAGPRNPGNPYRPYHAT 481
Score = 66.6 bits (139), Expect(2) = 6e-076
Identities = 29/34 (85%), Positives = 30/34 (88%)
Frame = +2 / -1
Query: 803 RASV*CFIASGYFCSLKNSLPFSLSSSANFGS*Y 904
RAS+*CFIASGYFC L SLPFSLSSSA FGS*Y
Sbjct: 106 RASL*CFIASGYFCCLNISLPFSLSSSATFGS*Y 5
Score = 46.9 bits (96), Expect(3) = 5e-044
Identities = 24/39 (61%), Positives = 28/39 (71%)
Frame = -2 / +2
Query: 907 RVL*SKISR*GERERQRVLQGAKIPRSNKTLHGGSQEKP 791
RVL* + SR*GERER +Q K+ RSNK L GSQE+P
Sbjct: 2 RVL*PEGSR*GERER**DVQATKVSRSNKALQ*GSQEEP 118
Score = 34.1 bits (68), Expect(2) = 2e-060
Identities = 11/23 (47%), Positives = 17/23 (73%)
Frame = -2 / +2
Query: 370 WSYAKDSEACKCWDSPNEMIRHT 302
W +DSEA K W+SPNE+++ +
Sbjct: 539 WCCTEDSEAHKRWNSPNEIVKQS 607
Score = 29.0 bits (57), Expect(3) = 5e-044
Identities = 16/24 (66%), Positives = 17/24 (70%)
Frame = -1 / +1
Query: 377 RTLELCKRFRSL*VLG*SK*DDQA 306
RTL L +RFRS * L *SK D QA
Sbjct: 532 RTLVLHRRFRSS*TLE*SKRDSQA 603
Score = 29.0 bits (57), Expect(2) = 1e-054
Identities = 13/18 (72%), Positives = 14/18 (77%)
Frame = +3 / -2
Query: 303 VCLIISFGLSQHLQASES 356
+CL ISFGL Q L ASES
Sbjct: 606 LCLTISFGLFQRL*ASES 553
>gb|CN815415.1|CN815415 HRO4509_D07_G13ZS5 Lib AA071E1X Avena sativa cv. Ogle-C root Avena
sativa cDNA clone HRO4509_D07_G13, mRNA sequence
Length = 725
Score = 271 bits (587), Expect = 1e-073
Identities = 111/133 (83%), Positives = 125/133 (93%)
Frame = -3 / -1
Query: 708 KCLELDPTFTKGYTRKGAIQFFMKEYDKAMETYQAGLKHDPKNQELLDGVRRCIEQINKA 529
+ +ELDPTF+KGYTRKGAIQFFMKE++KAMETYQAGLKHDP NQELLDG+RRCIEQINKA
Sbjct: 590 RSIELDPTFSKGYTRKGAIQFFMKEHEKAMETYQAGLKHDPNNQELLDGIRRCIEQINKA 411
Query: 528 NRGEISQDELQERQNKAMQDPEIQNILTDPIMRQVLNDFQENPRAAQEHLKNPGVMQKIQ 349
NRG+ISQ++LQE+Q+KAMQDPEIQ ILTDPIMRQVL DFQENP AAQ HLK+PGV QKIQ
Sbjct: 410 NRGDISQEDLQEKQSKAMQDPEIQGILTDPIMRQVLMDFQENPSAAQHHLKDPGVAQKIQ 231
Query: 348 KLVSAGIVQMR*S 310
KL++AGIVQ R*S
Sbjct: 230 KLINAGIVQTR*S 192
Score = 201 bits (433), Expect = 2e-052
Identities = 91/151 (60%), Positives = 101/151 (66%)
Frame = +2 / +1
Query: 248 HVN*QSQAQGTNKQVQSHRVPDHLIWTIPALTSF*IFCITPGFFRCSWAALGFSWKSFST 427
H Q ++K+ + D+L+WTIPA SF*IFC TPG R AALGFSWKS +T
Sbjct: 130 HNRAQEHQTSSHKRFCHLALLDYLVWTIPAFMSF*IFCATPGSLR*C*AALGFSWKSINT 309
Query: 428 CLMIGSVRMFWISGSCIALFCLSCNXXXXXXXXXXXXXXXMHLLTPSSSSWFFGSCFRPA 607
C MIGSVR+ WISGSCIAL C SC +HLL PSSSSW FGSCF PA
Sbjct: 310 CRMIGSVRIPWISGSCIALLCFSCKSS*LISPLLALLICSIHLLIPSSSSWLFGSCFNPA 489
Query: 608 **VSMALSYSFMKN*IAPFLVYPLVKVGSSS 700
*VS+A S SFMKN*IAPFLVYPL KVGSSS
Sbjct: 490 W*VSIAFSCSFMKN*IAPFLVYPLEKVGSSS 582
Score = 198 bits (427), Expect = 1e-051
Identities = 87/136 (63%), Positives = 103/136 (75%)
Frame = +1 / +3
Query: 298 ASCA*SSHLDYPSTYKLLNLLHNSRVLQVLLGRPWVLLEII*HLSHDRVGKNVLDLWVLH 477
+S A* S LDY S Y+LLNLL N+RVL+++L VLLEI +LSHDRVGK+ LD WVLH
Sbjct: 180 SSFA*LSRLDYSSVYELLNLLCNTRVLKMMLSSTRVLLEIHQYLSHDRVGKDSLDFWVLH 359
Query: 478 SFVLSFLQFVLTYFTSVSLVNLFNAPPNTIKQFLVFRVMLQASLIGFHGLVIFFHEELNC 657
SF L L +LTY T VSLVNL N PP TIKQFLV R++LQ SL+ FH L++FFHE+LNC
Sbjct: 360 SFTLFLL*VLLTYITPVSLVNLLNTPPYTIKQFLVIRIVLQPSLVSFHCLLMFFHEKLNC 539
Query: 658 TFPCVPFSEGGV*FKT 705
TF C+PF EG V* T
Sbjct: 540 TFSCIPFGEGWV*LNT 587
Score = 132 bits (283), Expect(2) = 5e-036
Identities = 64/108 (59%), Positives = 79/108 (73%)
Frame = -1 / -2
Query: 725 VLKMQRSVLN*TPPSLKGTQGKVQFNSS*KNMTRPWKPIRLA*SMTRKTRNCLMVLGGAL 546
++ ++ VL+*T PS KG Q KVQF+ S*KNM R WK +L *S R T+NCLMV GG L
Sbjct: 607 LISIKLEVLS*TQPSPKGIQEKVQFSFS*KNMRRQWKLTKLG*STIRITKNCLMV*GGVL 428
Query: 545 NKLTRLTEVK*VRTNCKKDRTKLCKTQRSRTFLPTLS*DRC*MISRRT 402
++LTRLT V *VR +++R KLC+TQ+SR LPTLS DR * ISRRT
Sbjct: 427 SRLTRLTGVI*VRRTYRRNRVKLCRTQKSRESLPTLSCDRY*WISRRT 284
Score = 116 bits (248), Expect(2) = 1e-029
Identities = 54/91 (59%), Positives = 66/91 (72%)
Frame = -2 / -3
Query: 700 *TRPHLH*RVHKERCNSILHERI*QGHGNLSGWPEA*PEKPGTA*WC*EVH*TN*QG*QR 521
* RP+L RV+K+RCNS+ HER *+G+GNL W EA E P TA*W EV+* +*QG*Q
Sbjct: 582 *ARPNLLQRVYKKRCNSVFHERT*EGNGNLPSWVEARSE*PRTA*WYKEVY*AD*QG*QG 403
Query: 520 *NKSGRIARKTEQSYARPRDPEHSYRPYHET 428
* KSG + +TE SYA PR+P + YRPYH T
Sbjct: 402 *YKSGGLTGETE*SYAGPRNPGNPYRPYHAT 310
Score = 102 bits (217), Expect(2) = 2e-025
Identities = 56/101 (55%), Positives = 64/101 (63%)
Frame = +3 / +2
Query: 414 NHLAPVS**GR*ECSGSLGLA*LCSVFLAIRPDLFHLC*PC*FVQCTS*HHQAVPGFSGH 593
N PV+**GR* G LG A*L SV PDL+H C*PC* Q TS +HQAV G+S
Sbjct: 296 NPSIPVA**GR*GFPGFLGPA*LYSVSPVSPPDLYHPC*PC*SAQYTSLYHQAVLGYSDR 475
Query: 594 ASGQPDRFPWPCHILS*RIELHLSLCTL**RWGLVQDTSLH 716
AS Q +FP P H+LS*+ ELHL L TL R GL Q L+
Sbjct: 476 ASTQLGKFPLPSHVLS*KTELHLFLYTLWRRLGLAQYFELY 598
Score = 34.1 bits (68), Expect(2) = 5e-036
Identities = 11/23 (47%), Positives = 17/23 (73%)
Frame = -2 / -3
Query: 370 WSYAKDSEACKCWDSPNEMIRHT 302
W +DSEA K W+SPNE+++ +
Sbjct: 252 WCCTEDSEAHKRWNSPNEIVKQS 184
Score = 29.0 bits (57), Expect(2) = 1e-029
Identities = 16/24 (66%), Positives = 17/24 (70%)
Frame = -1 / -2
Query: 377 RTLELCKRFRSL*VLG*SK*DDQA 306
RTL L +RFRS * L *SK D QA
Sbjct: 259 RTLVLHRRFRSS*TLE*SKRDSQA 188
Score = 29.0 bits (57), Expect(2) = 2e-025
Identities = 13/18 (72%), Positives = 14/18 (77%)
Frame = +3 / +2
Query: 303 VCLIISFGLSQHLQASES 356
+CL ISFGL Q L ASES
Sbjct: 185 LCLTISFGLFQRL*ASES 238
Database: Avena_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:15 PM
Number of letters in database: 4,702,463
Number of sequences in database: 8143
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 12,743,720
Number of Sequences: 8143
Number of extensions: 185224
Number of successful extensions: 839
Number of sequences better than 1.0e-020: 4
length of database: 1,567,487
effective HSP length: 44
effective length of database: 1,209,195
effective search space used: 409917105
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)