TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2404928.2.1
(932 letters)
Database: Avena_nucl_with_EST.fasta
8143 sequences; 4,702,463 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CN815408.1|CN815408 HRO4509_C11_E21ZS5 Lib AA071E1X Aven... 428 e-126
gb|CN816540.1|CN816540 HRO4521_H08_O15ZS5 Lib AA071E1X Aven... 428 e-121
gb|CN819629.1|CN819629 HRO4402_D05_G10ZS5 Lib AA069E1X Aven... 428 e-121
gb|CN815415.1|CN815415 HRO4509_D07_G13ZS5 Lib AA071E1X Aven... 277 2e-075
>gb|CN815408.1|CN815408 HRO4509_C11_E21ZS5 Lib AA071E1X Avena sativa cv. Ogle-C root Avena
sativa cDNA clone HRO4509_C11_E21, mRNA sequence
Length = 894
Score = 428 bits (929), Expect(2) = e-126
Identities = 171/201 (85%), Positives = 193/201 (96%)
Frame = -1 / +2
Query: 788 FYDPKLADEEREKGNEFFKEQKYPEAIKHYTEALKRNPKDPRVYSNRAACYTKLGAMPEG 609
+YDPK+ADEEREKGNE FK+QKYPEAIKHY EAL+RNPKD +VYSNRAACYTKLGAMPEG
Sbjct: 170 YYDPKVADEEREKGNEMFKQQKYPEAIKHYNEALRRNPKDVKVYSNRAACYTKLGAMPEG 349
Query: 608 LKDAEKCLELDPTFTKGYTRKGAIQFFMKEYDKAVETYQAGLKHDPNNQELLDGVKRCVE 429
LKDAEKC+ELDPTF+KGYTRKGAIQFFMKE++KA+ETYQAGLKHDPNNQELLDG++RC+E
Sbjct: 350 LKDAEKCIELDPTFSKGYTRKGAIQFFMKEHEKAMETYQAGLKHDPNNQELLDGIRRCIE 529
Query: 428 QINKANRGEISQDELQERQNKAMQDPEIQNILTDPIMRQVLIDFQENPSAAQEHLKNPGV 249
QINKANRG+ISQ++LQE+Q+KAMQDPEIQ ILTDPIMRQVL+DFQENPSAAQ HLK+PGV
Sbjct: 530 QINKANRGDISQEDLQEKQSKAMQDPEIQGILTDPIMRQVLMDFQENPSAAQHHLKDPGV 709
Query: 248 MQKIQKLVSAGIVQMR*SSDA 186
QKIQKL++AGIVQ R*SS A
Sbjct: 710 AQKIQKLINAGIVQTR*SSKA 772
Score = 275 bits (596), Expect(3) = 3e-088
Identities = 121/149 (81%), Positives = 125/149 (83%)
Frame = +1 / -1
Query: 184 IASLDHLI*TIPALTSF*IFCITPGFFRCSWAALGFSWKSIRTCRMIGSVRMFWISGSCI 363
+A LD+L+ TIPA SF*IFC TPG R AALGFSWKSI TCRMIGSVR+ WISGSCI
Sbjct: 774 LALLDYLVWTIPAFMSF*IFCATPGSLR*C*AALGFSWKSINTCRMIGSVRIPWISGSCI 595
Query: 364 ALFCLSCNSSWLISPLLALLICSTHLLTPSSSSWLFGSCFKPAW*VSTALSYSFMKN*IA 543
AL C SC SS LISPLLALLICS HLL PSSSSWLFGSCF PAW*VS A S SFMKN*IA
Sbjct: 594 ALLCFSCKSS*LISPLLALLICSIHLLIPSSSSWLFGSCFNPAW*VSIAFSCSFMKN*IA 415
Query: 544 PFLVYPLVKVGSSSRHFSASLRPSGMAPN 630
PFLVYPL KVGSSS HFSASLRPSGMAPN
Sbjct: 414 PFLVYPLEKVGSSSIHFSASLRPSGMAPN 328
Score = 248 bits (537), Expect(2) = 1e-067
Identities = 113/195 (57%), Positives = 133/195 (68%)
Frame = +3 / -3
Query: 201 SHLNYPSTYKLLNLLHNPGVLQVLLGRTWVLLEIY*NLSHDRVGKNVLDLWVLHSFVLSF 380
S L+Y S Y+LLNLL N VL+++L T VLLEI+ LSHDRVGK+ LD WVLHSF L
Sbjct: 757 SRLDYSSVYELLNLLCNTRVLKMMLSSTRVLLEIHQYLSHDRVGKDSLDFWVLHSFTLFL 578
Query: 381 LQFVLAYFTSVGLVDLFNTPLNTIKQFLVVRVMLQASLVGFHGLVIFFHEELNCTFPRIP 560
L +L Y T V LV+L NTP TIKQFLV+R++LQ SLV FH L++FFHE+LNCTF IP
Sbjct: 577 L*VLLTYITPVSLVNLLNTPPYTIKQFLVIRIVLQPSLVSFHCLLMFFHEKLNCTFSCIP 398
Query: 561 FGEGGVKFKTLFCVFKTFRHGS*LGVAGGPIAINPRILRVSLESLRVVFYCFWXXXXXXX 740
FGEG V TLF +FKTFRHGS LGVA PIA++ ILRV ESL V+ YCFW
Sbjct: 397 FGEGWV*LNTLFSIFKTFRHGSQLGVACSPIAVHLNILRVPPESLIVMLYCFWILLLLEH 218
Query: 741 XXXXXXXXICQFWII 785
IC +I
Sbjct: 217 LITFLSLLICYLRVI 173
Score = 239 bits (517), Expect = 4e-064
Identities = 121/209 (57%), Positives = 133/209 (63%)
Frame = +2 / -2
Query: 281 HLGSPGNLLEPVA**GR*ECSGSLGLA*LCSVFLAIRPGLFHLCWPC*SVQHTS*HHQAV 460
H GSPGN PVA**GR* G LG A*L SV P L+H C PC*S Q+TS +HQAV
Sbjct: 677 H*GSPGNPSIPVA**GR*GFPGFLGPA*LYSVSPVSPPDLYHPC*PC*SAQYTSLYHQAV 498
Query: 461 PGCSGHASSQPGRFPRPCHILS*RTELHLSSYTLW*RWGQVQDTFLRL*DLQAWLLTWCS 640
G S AS+Q G+FP P H+LS*+TELHL YTLW R G Q TF L*DLQAWL TWCS
Sbjct: 497 LGYSDRASTQLGKFPLPSHVLS*KTELHLFLYTLWRRLGLAQYTFQHL*DLQAWLPTWCS 318
Query: 641 RRPYCYKP*DPSGFS*EPPCSVLLLLGIFAP*RTRCLSLSPHLPILDHKTLVAXXXXXXX 820
+PYC P* P G S*EP C+ LLLL F * + LSLSPHL H TLVA
Sbjct: 317 MQPYCCTP*HP*GSS*EPHCNALLLLDTFVA*TSHYLSLSPHLLPSGHNTLVALSLSLPS 138
Query: 821 XXXXXF*EFLGSDAQSEPSGRXR*QYQIL 907
F*E SDAQ EPSG+ R QY+ L
Sbjct: 137 QPHLAF*ECQDSDAQLEPSGKSRWQYRSL 51
Score = 229 bits (495), Expect = 5e-061
Identities = 122/204 (59%), Positives = 140/204 (68%)
Frame = -2 / +3
Query: 802 *SNKSFMIQNWQMRRERKATSSSRSKNTQKQ*NTTRRLSRETRRILGFIAIGPPATPS*E 623
*SNKS M + QMRRERK S +K+ QKQ*+ T RLS T R+L AIG ATPS E
Sbjct: 156 *SNKSIMTRR*QMRRERKVMRCSSNKSIQKQ*SITMRLSGGTLRMLRCTAIGLHATPSWE 335
Query: 622 PCLKVLKTQKSVLNLTPPSPKGIRGKVQFSSS*KNMTRPWKPTRLA*SMTRTTRNCLMVL 443
PCLKVLK KSVL+ T PSPKGI+ KVQFS S*KNM R WK T+L *S R T+NCLMV
Sbjct: 336 PCLKVLKMLKSVLS*TQPSPKGIQEKVQFSFS*KNMRRQWKLTKLG*STIRITKNCLMV* 515
Query: 442 RGVLNRSTRPTEVK*ARTNCKKDRTKLCKTQRSRTFLPTLSCDRF**ISRRTQVRPRST* 263
GVL+R TR T V * R +++R KLC+TQ+SR LPTLSCDR+* ISRRT V
Sbjct: 516 GGVLSRLTRLTGVI*VRRTYRRNRVKLCRTQKSRESLPTLSCDRY*WISRRTLVLLSIIL 695
Query: 262 RTPGLCRRFRSL*VLG*FR*DDRA 191
RT L RRFRS * L * + D +A
Sbjct: 696 RTLVLHRRFRSS*TLE*SKRDSQA 767
Score = 156 bits (336), Expect(2) = 2e-065
Identities = 74/135 (54%), Positives = 91/135 (67%)
Frame = -3 / +1
Query: 594 KVS*T*PHLHQRVYEERCNSVLHERI*QGRGNLPGWLEA*PEQPGTA*WC*EVC*TDQQG 415
KV * P+L QRVY++RCNSV HER *+G GNLP W+EA E P TA*W EV * D QG
Sbjct: 364 KVY*ARPNLLQRVYKKRCNSVFHERT*EGNGNLPSWVEARSE*PRTA*WYKEVY*AD*QG 543
Query: 414 QQR*NKPGRIARKTEQSYARPRDPEHSYRPYHATGSNRFPGEPKCGPGAPEEPRGYAEDS 235
Q * K G + +TE SYA PR+P + YRPYHATG + FPGEP C + P EDS
Sbjct: 544 *QG*YKSGGLTGETE*SYAGPRNPGNPYRPYHATGIDGFPGEP*CCSASS*GPWCCTEDS 723
Query: 234 EACKCWDSSDEMIER 190
EA K W+S +E++++
Sbjct: 724 EAHKRWNSPNEIVKQ 768
Score = 107 bits (229), Expect(2) = 2e-065
Identities = 56/93 (60%), Positives = 67/93 (72%)
Frame = -3 / +1
Query: 906 RI*YCYRXLPEGSDXASEPRNS*KVX*G*ESKERVRATRVL*SKIGR*GERERQRVLQGA 727
R+ YC+R PEGS+ ASE +S K *G*E KER+RATRVL* + R*GERER +Q
Sbjct: 52 RLRYCHRDFPEGSN*ASES*HSQKAK*G*EGKERLRATRVL*PEGSR*GERER**DVQAT 231
Query: 726 KIPRSNKTLHGGSQEKPEGS*GL*Q*GRLLHQV 628
K+ RSNK L GSQE+P G *G+ Q*G +LHQV
Sbjct: 232 KVSRSNKALQ*GSQEEP*GC*GVQQ*GCMLHQV 330
Score = 42.3 bits (86), Expect(3) = 3e-088
Identities = 16/20 (80%), Positives = 18/20 (90%)
Frame = +1 / -1
Query: 841 RVSGFRCXVRAFWEXSIAIS 900
RVSGFRC VRAFW+ S+AIS
Sbjct: 117 RVSGFRCSVRAFWKVSMAIS 58
Score = 41.8 bits (85), Expect(3) = 3e-088
Identities = 17/21 (80%), Positives = 18/21 (85%)
Frame = +1 / -1
Query: 688 RASV*CFIASGYFCSLKNSLP 750
RAS+*CFIASGYFC L SLP
Sbjct: 270 RASL*CFIASGYFCCLNISLP 208
Score = 39.1 bits (79), Expect(2) = e-126
Identities = 15/20 (75%), Positives = 17/20 (85%)
Frame = -1 / +2
Query: 902 FDIAIEXSQKALTXHRNPET 843
+DIAIE QKALT HRNP+T
Sbjct: 56 YDIAIETFQKALTEHRNPDT 115
Score = 23.1 bits (44), Expect(2) = 1e-067
Identities = 10/16 (62%), Positives = 11/16 (68%)
Frame = +3 / -3
Query: 852 VPMXSQSLLGGLDSNI 899
+PM S SLL LD NI
Sbjct: 106 IPMLS*SLLESLDGNI 59
>gb|CN816540.1|CN816540 HRO4521_H08_O15ZS5 Lib AA071E1X Avena sativa cv. Ogle-C root Avena
sativa cDNA clone HRO4521_H08_O15, mRNA sequence
Length = 771
Score = 428 bits (929), Expect = e-121
Identities = 171/201 (85%), Positives = 193/201 (96%)
Frame = -1 / +2
Query: 788 FYDPKLADEEREKGNEFFKEQKYPEAIKHYTEALKRNPKDPRVYSNRAACYTKLGAMPEG 609
+YDPK+ADEEREKGNE FK+QKYPEAIKHY EAL+RNPKD +VYSNRAACYTKLGAMPEG
Sbjct: 14 YYDPKVADEEREKGNEMFKQQKYPEAIKHYNEALRRNPKDVKVYSNRAACYTKLGAMPEG 193
Query: 608 LKDAEKCLELDPTFTKGYTRKGAIQFFMKEYDKAVETYQAGLKHDPNNQELLDGVKRCVE 429
LKDAEKC+ELDPTF+KGYTRKGAIQFFMKE++KA+ETYQAGLKHDPNNQELLDG++RC+E
Sbjct: 194 LKDAEKCIELDPTFSKGYTRKGAIQFFMKEHEKAMETYQAGLKHDPNNQELLDGIRRCIE 373
Query: 428 QINKANRGEISQDELQERQNKAMQDPEIQNILTDPIMRQVLIDFQENPSAAQEHLKNPGV 249
QINKANRG+ISQ++LQE+Q+KAMQDPEIQ ILTDPIMRQVL+DFQENPSAAQ HLK+PGV
Sbjct: 374 QINKANRGDISQEDLQEKQSKAMQDPEIQGILTDPIMRQVLMDFQENPSAAQHHLKDPGV 553
Query: 248 MQKIQKLVSAGIVQMR*SSDA 186
QKIQKL++AGIVQ R*SS A
Sbjct: 554 AQKIQKLINAGIVQTR*SSKA 616
Score = 277 bits (600), Expect(2) = 8e-082
Identities = 122/149 (81%), Positives = 125/149 (83%)
Frame = +1 / -1
Query: 184 IASLDHLI*TIPALTSF*IFCITPGFFRCSWAALGFSWKSIRTCRMIGSVRMFWISGSCI 363
+A LD+L+ TIPA SF*IFC TPG R AALGFSWKSI TCRMIGSVRM WISGSCI
Sbjct: 618 LALLDYLVWTIPAFMSF*IFCATPGSLR*C*AALGFSWKSINTCRMIGSVRMPWISGSCI 439
Query: 364 ALFCLSCNSSWLISPLLALLICSTHLLTPSSSSWLFGSCFKPAW*VSTALSYSFMKN*IA 543
AL C SC SS LISPLLALLICS HLL PSSSSWLFGSCF PAW*VS A S SFMKN*IA
Sbjct: 438 ALLCFSCKSS*LISPLLALLICSIHLLIPSSSSWLFGSCFNPAW*VSIAFSCSFMKN*IA 259
Query: 544 PFLVYPLVKVGSSSRHFSASLRPSGMAPN 630
PFLVYPL KVGSSS HFSASLRPSGMAPN
Sbjct: 258 PFLVYPLEKVGSSSIHFSASLRPSGMAPN 172
Score = 250 bits (540), Expect = 3e-067
Identities = 111/195 (56%), Positives = 134/195 (68%)
Frame = +3 / -3
Query: 201 SHLNYPSTYKLLNLLHNPGVLQVLLGRTWVLLEIY*NLSHDRVGKNVLDLWVLHSFVLSF 380
S L+Y S Y+LLNLL N +L+++L T VLLEI+ LSHDR+GK+ LD WVLHSF L
Sbjct: 601 SRLDYSSVYELLNLLCNTRILKMMLSCTRVLLEIHQYLSHDRIGKDALDFWVLHSFTLFL 422
Query: 381 LQFVLAYFTSVGLVDLFNTPLNTIKQFLVVRVMLQASLVGFHGLVIFFHEELNCTFPRIP 560
L +L Y T V LV+L NTP TIKQFLV+R++LQ SLV FH L++FFHE+LNCTF IP
Sbjct: 421 L*VLLTYITPVSLVNLLNTPPYTIKQFLVIRIVLQPSLVSFHCLLMFFHEKLNCTFSCIP 242
Query: 561 FGEGGVKFKTLFCVFKTFRHGS*LGVAGGPIAINPRILRVSLESLRVVFYCFWXXXXXXX 740
FGEG V F TLF +FKTFRHGS LGVA P+A++ ILRV ESL V+ YCFW
Sbjct: 241 FGEGWV*FNTLFSIFKTFRHGSQLGVACSPVAVHLNILRVPPESLIVMLYCFWILLLLEH 62
Query: 741 XXXXXXXXICQFWII 785
IC +I
Sbjct: 61 LITFLSLLICYLRVI 17
Score = 218 bits (471), Expect = 9e-058
Identities = 116/200 (58%), Positives = 134/200 (67%)
Frame = -2 / +3
Query: 790 SFMIQNWQMRRERKATSSSRSKNTQKQ*NTTRRLSRETRRILGFIAIGPPATPS*EPCLK 611
S M + QMRRERK S +K+ QKQ*+ T RLS T R+L A G ATPS EPCLK
Sbjct: 12 SIMTRR*QMRRERKVMRCSSNKSIQKQ*SITMRLSGGTLRMLRCTATGLHATPSWEPCLK 191
Query: 610 VLKTQKSVLNLTPPSPKGIRGKVQFSSS*KNMTRPWKPTRLA*SMTRTTRNCLMVLRGVL 431
VLK KSVLN T PSPKGI+ KVQFS S*KNM R WK T+L *S R T+NCLMV GVL
Sbjct: 192 VLKMLKSVLN*TQPSPKGIQEKVQFSFS*KNMRRQWKLTKLG*STIRITKNCLMV*GGVL 371
Query: 430 NRSTRPTEVK*ARTNCKKDRTKLCKTQRSRTFLPTLSCDRF**ISRRTQVRPRST*RTPG 251
+R TR T V * R +++R KLC+TQ+SR LP LSCDR+* ISRRT V+ R
Sbjct: 372 SRLTRLTGVI*VRRTYRRNRVKLCRTQKSRASLPILSCDRY*WISRRTLVQLSIILRILV 551
Query: 250 LCRRFRSL*VLG*FR*DDRA 191
L RRFRS * L * + D +A
Sbjct: 552 LHRRFRSS*TLE*SKRDSQA 611
Score = 209 bits (450), Expect = 7e-055
Identities = 103/170 (60%), Positives = 113/170 (66%)
Frame = +2 / -2
Query: 281 HLGSPGNLLEPVA**GR*ECSGSLGLA*LCSVFLAIRPGLFHLCWPC*SVQHTS*HHQAV 460
H GSPGN PVA** R* C G LG A*L SV P L+H C PC*S Q+TS +HQAV
Sbjct: 521 H*GSPGNPSIPVA**DR*GCPGFLGPA*LYSVSPVSPPDLYHPC*PC*SAQYTSLYHQAV 342
Query: 461 PGCSGHASSQPGRFPRPCHILS*RTELHLSSYTLW*RWGQVQDTFLRL*DLQAWLLTWCS 640
G S AS+Q G+FP P H+LS*+TELHL YTLW R G VQ TF L*DLQAWL TWCS
Sbjct: 341 LGYSDRASTQLGKFPLPSHVLS*KTELHLFLYTLWRRLGLVQYTFQHL*DLQAWLPTWCS 162
Query: 641 RRPYCYKP*DPSGFS*EPPCSVLLLLGIFAP*RTRCLSLSPHLPILDHKT 790
+P C P* P G S*EP C+ LLLL F * + LSLSPHL H T
Sbjct: 161 MQPCCCTP*HP*GSS*EPHCNALLLLDTFVA*TSHYLSLSPHLLPSGHNT 12
Score = 140 bits (301), Expect(3) = 9e-048
Identities = 65/105 (61%), Positives = 74/105 (70%)
Frame = -3 / +1
Query: 594 KVS*T*PHLHQRVYEERCNSVLHERI*QGRGNLPGWLEA*PEQPGTA*WC*EVC*TDQQG 415
KV *T P+L QRVY++RCNSV HER *+G GNLP W+EA E P TA*W EV * D QG
Sbjct: 208 KVY*TRPNLLQRVYKKRCNSVFHERT*EGNGNLPSWVEARSE*PRTA*WYKEVY*AD*QG 387
Query: 414 QQR*NKPGRIARKTEQSYARPRDPEHSYRPYHATGSNRFPGEPKC 280
Q * K G + +TE SYA PR+P H YR YHATG + FPGEP C
Sbjct: 388 *QG*YKSGGLTGETE*SYAGPRNPGHPYRSYHATGIDGFPGEP*C 522
Score = 57.4 bits (119), Expect(3) = 9e-048
Identities = 31/54 (57%), Positives = 37/54 (68%)
Frame = -3 / +1
Query: 789 VL*SKIGR*GERERQRVLQGAKIPRSNKTLHGGSQEKPEGS*GL*Q*GRLLHQV 628
VL* + R*GERER +Q K+ RSNK L GSQE+P G *G+ Q G +LHQV
Sbjct: 13 VL*PEGSR*GERER**DVQATKVSRSNKALQ*GSQEEP*GC*GVQQQGCMLHQV 174
Score = 41.8 bits (85), Expect(2) = 8e-082
Identities = 17/21 (80%), Positives = 18/21 (85%)
Frame = +1 / -1
Query: 688 RASV*CFIASGYFCSLKNSLP 750
RAS+*CFIASGYFC L SLP
Sbjct: 114 RASL*CFIASGYFCCLNISLP 52
Score = 25.8 bits (50), Expect(3) = 9e-048
Identities = 9/18 (50%), Positives = 15/18 (83%)
Frame = -3 / +1
Query: 243 EDSEACKCWDSSDEMIER 190
EDSEA K W+S +E++++
Sbjct: 559 EDSEAHKRWNSPNEIVKQ 612
>gb|CN819629.1|CN819629 HRO4402_D05_G10ZS5 Lib AA069E1X Avena sativa cv. Ogle-C etiolated
leaf Avena sativa cDNA clone HRO4402_D05_G10, mRNA
sequence
Length = 766
Score = 428 bits (929), Expect = e-121
Identities = 171/201 (85%), Positives = 193/201 (96%)
Frame = -1 / +3
Query: 788 FYDPKLADEEREKGNEFFKEQKYPEAIKHYTEALKRNPKDPRVYSNRAACYTKLGAMPEG 609
+YDPK+ADEEREKGNE FK+QKYPEAIKHY EAL+RNPKD +VYSNRAACYTKLGAMPEG
Sbjct: 6 YYDPKVADEEREKGNEMFKQQKYPEAIKHYNEALRRNPKDVKVYSNRAACYTKLGAMPEG 185
Query: 608 LKDAEKCLELDPTFTKGYTRKGAIQFFMKEYDKAVETYQAGLKHDPNNQELLDGVKRCVE 429
LKDAEKC+ELDPTF+KGYTRKGAIQFFMKE++KA+ETYQAGLKHDPNNQELLDG++RC+E
Sbjct: 186 LKDAEKCIELDPTFSKGYTRKGAIQFFMKEHEKAMETYQAGLKHDPNNQELLDGIRRCIE 365
Query: 428 QINKANRGEISQDELQERQNKAMQDPEIQNILTDPIMRQVLIDFQENPSAAQEHLKNPGV 249
QINKANRG+ISQ++LQE+Q+KAMQDPEIQ ILTDPIMRQVL+DFQENPSAAQ HLK+PGV
Sbjct: 366 QINKANRGDISQEDLQEKQSKAMQDPEIQGILTDPIMRQVLMDFQENPSAAQHHLKDPGV 545
Query: 248 MQKIQKLVSAGIVQMR*SSDA 186
QKIQKL++AGIVQ R*SS A
Sbjct: 546 AQKIQKLINAGIVQTR*SSKA 608
Score = 275 bits (596), Expect(2) = 3e-081
Identities = 121/149 (81%), Positives = 125/149 (83%)
Frame = +1 / -1
Query: 184 IASLDHLI*TIPALTSF*IFCITPGFFRCSWAALGFSWKSIRTCRMIGSVRMFWISGSCI 363
+A LD+L+ TIPA SF*IFC TPG R AALGFSWKSI TCRMIGSVR+ WISGSCI
Sbjct: 610 LALLDYLVWTIPAFMSF*IFCATPGSLR*C*AALGFSWKSINTCRMIGSVRIPWISGSCI 431
Query: 364 ALFCLSCNSSWLISPLLALLICSTHLLTPSSSSWLFGSCFKPAW*VSTALSYSFMKN*IA 543
AL C SC SS LISPLLALLICS HLL PSSSSWLFGSCF PAW*VS A S SFMKN*IA
Sbjct: 430 ALLCFSCKSS*LISPLLALLICSIHLLIPSSSSWLFGSCFNPAW*VSIAFSCSFMKN*IA 251
Query: 544 PFLVYPLVKVGSSSRHFSASLRPSGMAPN 630
PFLVYPL KVGSSS HFSASLRPSGMAPN
Sbjct: 250 PFLVYPLEKVGSSSIHFSASLRPSGMAPN 164
Score = 248 bits (537), Expect = 7e-067
Identities = 113/195 (57%), Positives = 133/195 (68%)
Frame = +3 / -3
Query: 201 SHLNYPSTYKLLNLLHNPGVLQVLLGRTWVLLEIY*NLSHDRVGKNVLDLWVLHSFVLSF 380
S L+Y S Y+LLNLL N VL+++L T VLLEI+ LSHDRVGK+ LD WVLHSF L
Sbjct: 593 SRLDYSSVYELLNLLCNTRVLKMMLSSTRVLLEIHQYLSHDRVGKDSLDFWVLHSFTLFL 414
Query: 381 LQFVLAYFTSVGLVDLFNTPLNTIKQFLVVRVMLQASLVGFHGLVIFFHEELNCTFPRIP 560
L +L Y T V LV+L NTP TIKQFLV+R++LQ SLV FH L++FFHE+LNCTF IP
Sbjct: 413 L*VLLTYITPVSLVNLLNTPPYTIKQFLVIRIVLQPSLVSFHCLLMFFHEKLNCTFSCIP 234
Query: 561 FGEGGVKFKTLFCVFKTFRHGS*LGVAGGPIAINPRILRVSLESLRVVFYCFWXXXXXXX 740
FGEG V TLF +FKTFRHGS LGVA PIA++ ILRV ESL V+ YCFW
Sbjct: 233 FGEGWV*LNTLFSIFKTFRHGSQLGVACSPIAVHLNILRVPPESLIVMLYCFWILLLLEH 54
Query: 741 XXXXXXXXICQFWII 785
IC +I
Sbjct: 53 LITFLSLLICYLRVI 9
Score = 224 bits (484), Expect = 2e-059
Identities = 119/201 (59%), Positives = 137/201 (68%)
Frame = -2 / +1
Query: 793 KSFMIQNWQMRRERKATSSSRSKNTQKQ*NTTRRLSRETRRILGFIAIGPPATPS*EPCL 614
KS M + QMRRERK S +K+ QKQ*+ T RLS T R+L AIG ATPS EPCL
Sbjct: 1 KSIMTRR*QMRRERKVMRCSSNKSIQKQ*SITMRLSGGTLRMLRCTAIGLHATPSWEPCL 180
Query: 613 KVLKTQKSVLNLTPPSPKGIRGKVQFSSS*KNMTRPWKPTRLA*SMTRTTRNCLMVLRGV 434
KVLK KSVL+ T PSPKGI+ KVQFS S*KNM R WK T+L *S R T+NCLMV GV
Sbjct: 181 KVLKMLKSVLS*TQPSPKGIQEKVQFSFS*KNMRRQWKLTKLG*STIRITKNCLMV*GGV 360
Query: 433 LNRSTRPTEVK*ARTNCKKDRTKLCKTQRSRTFLPTLSCDRF**ISRRTQVRPRST*RTP 254
L+R TR T V * R +++R KLC+TQ+SR LPTLSCDR+* ISRRT V RT
Sbjct: 361 LSRLTRLTGVI*VRRTYRRNRVKLCRTQKSRESLPTLSCDRY*WISRRTLVLLSIILRTL 540
Query: 253 GLCRRFRSL*VLG*FR*DDRA 191
L RRFRS * L * + D +A
Sbjct: 541 VLHRRFRSS*TLE*SKRDSQA 603
Score = 211 bits (455), Expect = 2e-055
Identities = 104/171 (60%), Positives = 114/171 (66%)
Frame = +2 / -2
Query: 281 HLGSPGNLLEPVA**GR*ECSGSLGLA*LCSVFLAIRPGLFHLCWPC*SVQHTS*HHQAV 460
H GSPGN PVA**GR* G LG A*L SV P L+H C PC*S Q+TS +HQAV
Sbjct: 513 H*GSPGNPSIPVA**GR*GFPGFLGPA*LYSVSPVSPPDLYHPC*PC*SAQYTSLYHQAV 334
Query: 461 PGCSGHASSQPGRFPRPCHILS*RTELHLSSYTLW*RWGQVQDTFLRL*DLQAWLLTWCS 640
G S AS+Q G+FP P H+LS*+TELHL YTLW R G Q TF L*DLQAWL TWCS
Sbjct: 333 LGYSDRASTQLGKFPLPSHVLS*KTELHLFLYTLWRRLGLAQYTFQHL*DLQAWLPTWCS 154
Query: 641 RRPYCYKP*DPSGFS*EPPCSVLLLLGIFAP*RTRCLSLSPHLPILDHKTL 793
+PYC P* P G S*EP C+ LLLL F * + LSLSPHL H TL
Sbjct: 153 MQPYCCTP*HP*GSS*EPHCNALLLLDTFVA*TSHYLSLSPHLLPSGHNTL 1
Score = 156 bits (336), Expect(2) = 1e-051
Identities = 74/135 (54%), Positives = 91/135 (67%)
Frame = -3 / +2
Query: 594 KVS*T*PHLHQRVYEERCNSVLHERI*QGRGNLPGWLEA*PEQPGTA*WC*EVC*TDQQG 415
KV * P+L QRVY++RCNSV HER *+G GNLP W+EA E P TA*W EV * D QG
Sbjct: 200 KVY*ARPNLLQRVYKKRCNSVFHERT*EGNGNLPSWVEARSE*PRTA*WYKEVY*AD*QG 379
Query: 414 QQR*NKPGRIARKTEQSYARPRDPEHSYRPYHATGSNRFPGEPKCGPGAPEEPRGYAEDS 235
Q * K G + +TE SYA PR+P + YRPYHATG + FPGEP C + P EDS
Sbjct: 380 *QG*YKSGGLTGETE*SYAGPRNPGNPYRPYHATGIDGFPGEP*CCSASS*GPWCCTEDS 559
Query: 234 EACKCWDSSDEMIER 190
EA K W+S +E++++
Sbjct: 560 EAHKRWNSPNEIVKQ 604
Score = 62.0 bits (129), Expect(2) = 1e-051
Identities = 33/55 (60%), Positives = 39/55 (70%)
Frame = -3 / +2
Query: 792 RVL*SKIGR*GERERQRVLQGAKIPRSNKTLHGGSQEKPEGS*GL*Q*GRLLHQV 628
RVL* + R*GERER +Q K+ RSNK L GSQE+P G *G+ Q*G +LHQV
Sbjct: 2 RVL*PEGSR*GERER**DVQATKVSRSNKALQ*GSQEEP*GC*GVQQ*GCMLHQV 166
Score = 41.8 bits (85), Expect(2) = 3e-081
Identities = 17/21 (80%), Positives = 18/21 (85%)
Frame = +1 / -1
Query: 688 RASV*CFIASGYFCSLKNSLP 750
RAS+*CFIASGYFC L SLP
Sbjct: 106 RASL*CFIASGYFCCLNISLP 44
>gb|CN815415.1|CN815415 HRO4509_D07_G13ZS5 Lib AA071E1X Avena sativa cv. Ogle-C root Avena
sativa cDNA clone HRO4509_D07_G13, mRNA sequence
Length = 725
Score = 277 bits (600), Expect = 2e-075
Identities = 112/136 (82%), Positives = 130/136 (95%)
Frame = -1 / -1
Query: 593 KCLELDPTFTKGYTRKGAIQFFMKEYDKAVETYQAGLKHDPNNQELLDGVKRCVEQINKA 414
+ +ELDPTF+KGYTRKGAIQFFMKE++KA+ETYQAGLKHDPNNQELLDG++RC+EQINKA
Sbjct: 590 RSIELDPTFSKGYTRKGAIQFFMKEHEKAMETYQAGLKHDPNNQELLDGIRRCIEQINKA 411
Query: 413 NRGEISQDELQERQNKAMQDPEIQNILTDPIMRQVLIDFQENPSAAQEHLKNPGVMQKIQ 234
NRG+ISQ++LQE+Q+KAMQDPEIQ ILTDPIMRQVL+DFQENPSAAQ HLK+PGV QKIQ
Sbjct: 410 NRGDISQEDLQEKQSKAMQDPEIQGILTDPIMRQVLMDFQENPSAAQHHLKDPGVAQKIQ 231
Query: 233 KLVSAGIVQMR*SSDA 186
KL++AGIVQ R*SS A
Sbjct: 230 KLINAGIVQTR*SSKA 183
Score = 243 bits (525), Expect = 3e-065
Identities = 107/134 (79%), Positives = 111/134 (82%)
Frame = +1 / +1
Query: 184 IASLDHLI*TIPALTSF*IFCITPGFFRCSWAALGFSWKSIRTCRMIGSVRMFWISGSCI 363
+A LD+L+ TIPA SF*IFC TPG R AALGFSWKSI TCRMIGSVR+ WISGSCI
Sbjct: 181 LALLDYLVWTIPAFMSF*IFCATPGSLR*C*AALGFSWKSINTCRMIGSVRIPWISGSCI 360
Query: 364 ALFCLSCNSSWLISPLLALLICSTHLLTPSSSSWLFGSCFKPAW*VSTALSYSFMKN*IA 543
AL C SC SS LISPLLALLICS HLL PSSSSWLFGSCF PAW*VS A S SFMKN*IA
Sbjct: 361 ALLCFSCKSS*LISPLLALLICSIHLLIPSSSSWLFGSCFNPAW*VSIAFSCSFMKN*IA 540
Query: 544 PFLVYPLVKVGSSS 585
PFLVYPL KVGSSS
Sbjct: 541 PFLVYPLEKVGSSS 582
Score = 181 bits (389), Expect = 2e-046
Identities = 81/130 (62%), Positives = 96/130 (73%)
Frame = +3 / +3
Query: 201 SHLNYPSTYKLLNLLHNPGVLQVLLGRTWVLLEIY*NLSHDRVGKNVLDLWVLHSFVLSF 380
S L+Y S Y+LLNLL N VL+++L T VLLEI+ LSHDRVGK+ LD WVLHSF L
Sbjct: 198 SRLDYSSVYELLNLLCNTRVLKMMLSSTRVLLEIHQYLSHDRVGKDSLDFWVLHSFTLFL 377
Query: 381 LQFVLAYFTSVGLVDLFNTPLNTIKQFLVVRVMLQASLVGFHGLVIFFHEELNCTFPRIP 560
L +L Y T V LV+L NTP TIKQFLV+R++LQ SLV FH L++FFHE+LNCTF IP
Sbjct: 378 L*VLLTYITPVSLVNLLNTPPYTIKQFLVIRIVLQPSLVSFHCLLMFFHEKLNCTFSCIP 557
Query: 561 FGEGGVKFKT 590
FGEG V T
Sbjct: 558 FGEGWV*LNT 587
Score = 155 bits (332), Expect = 1e-038
Identities = 71/129 (55%), Positives = 88/129 (68%)
Frame = -3 / -3
Query: 576 PHLHQRVYEERCNSVLHERI*QGRGNLPGWLEA*PEQPGTA*WC*EVC*TDQQGQQR*NK 397
P+L QRVY++RCNSV HER *+G GNLP W+EA E P TA*W EV * D QG Q * K
Sbjct: 573 PNLLQRVYKKRCNSVFHERT*EGNGNLPSWVEARSE*PRTA*WYKEVY*AD*QG*QG*YK 394
Query: 396 PGRIARKTEQSYARPRDPEHSYRPYHATGSNRFPGEPKCGPGAPEEPRGYAEDSEACKCW 217
G + +TE SYA PR+P + YRPYHATG + FPGEP C + P EDSEA K W
Sbjct: 393 SGGLTGETE*SYAGPRNPGNPYRPYHATGIDGFPGEP*CCSASS*GPWCCTEDSEAHKRW 214
Query: 216 DSSDEMIER 190
+S +E++++
Sbjct: 213 NSPNEIVKQ 187
Score = 150 bits (323), Expect = 2e-037
Identities = 79/140 (56%), Positives = 95/140 (67%)
Frame = -2 / -2
Query: 610 VLKTQKSVLNLTPPSPKGIRGKVQFSSS*KNMTRPWKPTRLA*SMTRTTRNCLMVLRGVL 431
++ + VL+ T PSPKGI+ KVQFS S*KNM R WK T+L *S R T+NCLMV GVL
Sbjct: 607 LISIKLEVLS*TQPSPKGIQEKVQFSFS*KNMRRQWKLTKLG*STIRITKNCLMV*GGVL 428
Query: 430 NRSTRPTEVK*ARTNCKKDRTKLCKTQRSRTFLPTLSCDRF**ISRRTQVRPRST*RTPG 251
+R TR T V * R +++R KLC+TQ+SR LPTLSCDR+* ISRRT V RT
Sbjct: 427 SRLTRLTGVI*VRRTYRRNRVKLCRTQKSRESLPTLSCDRY*WISRRTLVLLSIILRTLV 248
Query: 250 LCRRFRSL*VLG*FR*DDRA 191
L RRFRS * L * + D +A
Sbjct: 247 LHRRFRSS*TLE*SKRDSQA 188
Score = 123 bits (264), Expect = 3e-029
Identities = 62/102 (60%), Positives = 69/102 (67%)
Frame = +2 / +2
Query: 281 HLGSPGNLLEPVA**GR*ECSGSLGLA*LCSVFLAIRPGLFHLCWPC*SVQHTS*HHQAV 460
H GSPGN PVA**GR* G LG A*L SV P L+H C PC*S Q+TS +HQAV
Sbjct: 278 H*GSPGNPSIPVA**GR*GFPGFLGPA*LYSVSPVSPPDLYHPC*PC*SAQYTSLYHQAV 457
Query: 461 PGCSGHASSQPGRFPRPCHILS*RTELHLSSYTLW*RWGQVQ 586
G S AS+Q G+FP P H+LS*+TELHL YTLW R G Q
Sbjct: 458 LGYSDRASTQLGKFPLPSHVLS*KTELHLFLYTLWRRLGLAQ 583
Database: Avena_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:15 PM
Number of letters in database: 4,702,463
Number of sequences in database: 8143
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 10,437,564
Number of Sequences: 8143
Number of extensions: 169394
Number of successful extensions: 1048
Number of sequences better than 1.0e-020: 4
length of database: 1,567,487
effective HSP length: 43
effective length of database: 1,217,338
effective search space used: 325029246
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)