TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2161272.2.21
(693 letters)
Database: Avena_nucl_with_EST.fasta
8143 sequences; 4,702,463 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|AF082991.1|AF082991 Avena sativa beta-D-glucosidase beta... 224 e-104
emb|X78433.1|ASLBDG A.sativa L. mRNA for beta-D-glucosidase 173 1e-099
gb|CN821463.1|CN821463 HRO4425_F05_K09ZS5 Lib AA069E1X Aven... 168 2e-048
gb|CN821540.1|CN821540 HRO4426_E01_I02ZS5 Lib AA069E1X Aven... 168 2e-048
gb|CN819927.1|CN819927 HRO4407_H12_P23ZS5 Lib AA069E1X Aven... 168 2e-047
gb|CN821151.1|CN821151 HRO4428_A10_B20ZS5 Lib AA069E1X Aven... 146 3e-036
gb|CN820938.1|CN820938 HRO4421_F11_K21ZS5 Lib AA069E1X Aven... 144 1e-035
gb|CN820252.1|CN820252 HRO4417_C06_E11ZS5 Lib AA069E1X Aven... 138 1e-033
gb|CN818764.1|CN818764 HRO4468_D02_G04ZS5 Lib AA070E1X Aven... 109 2e-031
gb|CN819479.1|CN819479 HRO4406_E06_I12ZS5 Lib AA069E1X Aven... 114 1e-026
gb|CN819567.1|CN819567 HRO4401_F08_K15ZS5 Lib AA069E1X Aven... 105 6e-024
>gb|AF082991.1|AF082991 Avena sativa beta-D-glucosidase beta subunit precursor (P60b) mRNA,
complete cds
Length = 1923
Score = 224 bits (483), Expect(2) = e-104
Identities = 85/128 (66%), Positives = 98/128 (76%)
Frame = +3 / +1
Query: 3 YKRLINLLKENGIEPYVTLFHWDTPQALVDSYGGFLDDRIVKDYTDFAKVCFVHFGDVVK 182
Y L++ L ENGI+PY+TLFHWDTPQAL D Y FLD RIVKDYTD+A VCF HFGD VK
Sbjct: 523 YNDLLDCLIENGIKPYITLFHWDTPQALADKYNDFLDRRIVKDYTDYATVCFEHFGDKVK 702
Query: 183 NWFTFNEPQTFSSFSYGTGIFAPGRCSPGQKCANPTGNSLTEPYIVAHNLLRAHAETVHE 362
NW TFNEP +F +YGTG+ APG CSPG CA P G++L +PYIV HNLL AHAETV
Sbjct: 703 NWITFNEPHSFCGLAYGTGLHAPGLCSPGMDCAIPQGDALRQPYIVGHNLLLAHAETVDV 882
Query: 363 YNKHYRGN 386
Y K Y+G+
Sbjct: 883 YKKFYKGD 906
Score = 171 bits (367), Expect(2) = e-104
Identities = 66/103 (64%), Positives = 83/103 (80%)
Frame = +3 / +1
Query: 369 KHYRGNKDAQIGIEKNVMGRVPYDNMFLDDQAQERSIDYNLGWFMEPVVRGDYPFSMRSL 548
K + D QIG+ +VM PY N F+D QAQERSID+++GWF+EP+VRGDYPFSMRSL
Sbjct: 886 KKFYKGDDGQIGMVMDVMAYEPYGNNFVDQQAQERSIDFHIGWFLEPMVRGDYPFSMRSL 1065
Query: 549 IKDRLPYFTDDEKEKLVGSYDIMGINYYTSRFSKHIDISPKYL 677
+ DRLP+FT E+EKLV SYD +GINYYT+RFS+HIDISP+ +
Sbjct: 1066 VGDRLPFFTKSEQEKLVSSYDFVGINYYTARFSEHIDISPEII 1194
Score = 162 bits (349), Expect(3) = 1e-059
Identities = 77/121 (63%), Positives = 84/121 (69%)
Frame = -3 / -2
Query: 382 PL*CLLYSWTVSA*ARRRLWATMYGSVSEFPVGLAHFCPGEHRPGAKIPVP*EKEENVCG 203
PL* L + TVSA ARRRLW TMYG +S P G+A PGE PGA PVP* K +N CG
Sbjct: 902 PL*NFL*TSTVSACARRRLWPTMYGCLSASPCGMAQSMPGEQSPGACNPVP*AKPQNECG 723
Query: 202 SLKVNQFFTTSPKCTKHTLAKSV*SFTIXXXXXXXXXSTSA*GVSQWKSVTYGSMPFSFN 23
SLKV QFFT SPKC+KHT+A SV*SFTI S SA*GVSQWKSV YG MPFS
Sbjct: 722 SLKVIQFFTLSPKCSKHTVA*SV*SFTILLSKKSLYLSASA*GVSQWKSVIYGFMPFSIK 543
Query: 22 K 20
+
Sbjct: 542 Q 540
Score = 135 bits (290), Expect(2) = 7e-047
Identities = 68/125 (54%), Positives = 82/125 (65%)
Frame = +2 / +3
Query: 2 LQKAHQLVERERHRTICDTFPLGHTSSAGGQLRWLLR*QDCKRLHGLCQGVLCALRRRRE 181
LQ +L++RERH+ I FPLGH SS G Q++ LLR*+DCKRLH L GVL ALRR+ E
Sbjct: 522 LQ*PARLLDRERHKAIYYAFPLGHPSSTGRQVQRLLR*EDCKRLHRLRDGVL*ALRRQGE 701
Query: 182 ELVHLQRATDVLLFFLRNRDLCSGAVLPRTKMR*PNRELAHRAIHCCPQPPPSSR*DCP* 361
EL HL RAT +L F L N C A+L R + P A AIHC PQPPPS+ *DC
Sbjct: 702 ELDHL*RATLILWFGLWNGVACPWALLARHGLCHPTGRRAQTAIHCWPQPPPSTC*DC*C 881
Query: 362 VQQAL 376
+Q+ L
Sbjct: 882 LQKVL 896
Score = 131 bits (281), Expect(3) = 1e-043
Identities = 58/106 (54%), Positives = 71/106 (66%)
Frame = -2 / -1
Query: 320 NNVWLGERVPGWVSAFLSWGAPPRSKDPGSVGKRGERLWLVEGEPVLHDVAEVHKAHLGK 141
NNVWL ERV W +W A PR P S+G+ + +WLV+G+P+LH VAEV KAH
Sbjct: 840 NNVWLSERVSLWDGTVHAWRAKPRGMQPRSIGQTTK*VWLVKGDPILHLVAEVLKAHRRV 661
Query: 140 VRVIFYNPVI*EATVAVHQRLRCVPVEKCHIWFYAVLFQQVDEPFV 3
V VIFYNP I*E V V Q LR VPVEK +IW YAVL+Q +++ V
Sbjct: 660 VCVIFYNPPI*EVVVLVCQCLRGVPVEKRNIWLYAVLYQAIEQVIV 523
Score = 96.8 bits (205), Expect(3) = 7e-033
Identities = 50/89 (56%), Positives = 58/89 (65%)
Frame = +1 / +2
Query: 1 TTKGSSTC*KRTA*NHM*HFSTGTHLKRWWTATVAS*MTGL*KITRTLPRCALCTSATS* 180
TT S * RTA*+H+ FSTGT LK W T+T S*+ GL*KIT+T RCAL TSAT *
Sbjct: 521 TTMTCSIA**RTA*SHILRFSTGTPLKHWQTSTTTS*IGGL*KITQTTRRCALSTSATR* 700
Query: 181 RTGSPSTSHRRSPLFPTEPGSLLRGGAPQ 267
R GSP TSH ++P E G + G A Q
Sbjct: 701 RIGSPLTSHTHFVVWPMERGCMPLGFARQ 787
Score = 70.7 bits (148), Expect(3) = 1e-059
Identities = 31/53 (58%), Positives = 37/53 (69%)
Frame = -3 / -2
Query: 547 NDLMEKG*SPRTTGSMNHPRL*SMDLSWAWSSRNILSYGTRPITFFSIPICAS 389
+DL+EKG*SPRT GS NHP S+DLSWA S + YG+ IT +IPIC S
Sbjct: 1064 SDLIEKG*SPRTIGSRNHPMWKSIDLSWAC*STKLFPYGS*AITSITIPICPS 906
Score = 68.9 bits (144), Expect(3) = 6e-029
Identities = 30/51 (58%), Positives = 36/51 (70%)
Frame = -1 / -3
Query: 153 TPWQSPCNLLQSCHLRSHRSCPPALEVCPSGKVSHMVLCRSLSTS**AFCS 1
TP +S CNLLQS +LRS +C P LE CPSGK +M LCRSLS++ CS
Sbjct: 673 TPSRSLCNLLQSSYLRSRCTCLPVLEGCPSGKA*YMALCRSLSSNRAGHCS 521
Score = 66.6 bits (139), Expect(2) = 7e-047
Identities = 37/82 (45%), Positives = 50/82 (60%)
Frame = +2 / +3
Query: 416 RDGPCAI*QYVSRRPGPRKVHRL*PRMVHGAGSSRRLPFLHEIIDQGSATLLHRRREREA 595
R+G AI + + R GPRK++ L RMV GA S LP L+E+ S+TLLH+ REA
Sbjct: 933 RNGLRAIWKQLRRSTGPRKIN*LPHRMVPGANGSW*LPLLYEVTGGRSSTLLHQV*AREA 1112
Query: 596 SGFL*HNGDKLLHLEVFQAHRH 661
S + D+LLH VF+A+ H
Sbjct: 1113 SVLIRFRRDQLLHR*VFRAY*H 1178
Score = 60.6 bits (126), Expect(3) = 7e-033
Identities = 31/61 (50%), Positives = 34/61 (55%)
Frame = +1 / +2
Query: 415 T*WAVCHMTICFSTTRPKKGPSIIT*DGSWSR*FAATTLSP*DH*SRIGYPTSPTTRKRS 594
T*W HM S RPKK T DGSWS+ F TT S * H I YP+SP+ KRS
Sbjct: 932 T*WLTSHMETTSSINRPKKDQLTSTSDGSWSQWFVVTTPSL*GHWWEIVYPSSPSLSKRS 1111
Query: 595 * 597
*
Sbjct: 1112 * 1114
Score = 50.6 bits (104), Expect(3) = 6e-029
Identities = 35/83 (42%), Positives = 42/83 (50%)
Frame = -1 / -3
Query: 663 RCRCAWKTSRCSSLSPLCHKNPLASLXXXXXXRVADP*SMISWRKGSRRELPAP*TILGY 484
+C+ A KT RCSS S LASL RV D + S R+GS E AP TI
Sbjct: 1180 KCQYARKT*RCSS*SLRNRMRTLASLAQTW*RRVDDLPPVTS*RRGSHHEPLAPGTIRCG 1001
Query: 483 NRWTFLGPGRRETYCHMAHGPSR 415
++ FLGP R + HMA P R
Sbjct: 1000 SQLIFLGPVDRRSCFHMARKPLR 932
Score = 48.3 bits (99), Expect(3) = 1e-043
Identities = 22/53 (41%), Positives = 33/53 (62%)
Frame = -2 / -1
Query: 557 ILDQ*SHGERVVAANYRLHEPS*VIIDGPFLGLVVEKHIVIWHTAHHVFFNPY 399
I Q* H E VV N+ L EPS V ++ FLGL++++ + IW +H+V + Y
Sbjct: 1074 ISHQ*PHREGVVTTNHWLQEPSDVEVN*SFLGLLIDEVVSIWLVSHYVHNHTY 916
Score = 46.4 bits (95), Expect(3) = 6e-029
Identities = 19/28 (67%), Positives = 20/28 (71%)
Frame = -1 / -3
Query: 366 CTHGQSQRELGGGCGQQCMAR*ASSRLG 283
C H QSQ LGGGCGQQCMA *A +G
Sbjct: 886 CKHQQSQHVLGGGCGQQCMAV*ARLPVG 803
Score = 29.9 bits (59), Expect(3) = 1e-059
Identities = 13/17 (76%), Positives = 14/17 (82%)
Frame = -3 / -2
Query: 667 GEMSMCLENLEV**FIP 617
GEMS+C ENL V** IP
Sbjct: 1184 GEMSICSENLAV**LIP 1134
Score = 29.5 bits (58), Expect(3) = 1e-043
Identities = 11/22 (50%), Positives = 17/22 (77%)
Frame = -2 / -1
Query: 662 DVDVLGKPRGVVVYPHYVIRTH 597
+V++LGKP GVVV P+ ++ H
Sbjct: 1179 NVNMLGKPSGVVVDPYEIV*GH 1114
Score = 21.7 bits (41), Expect(3) = 7e-033
Identities = 8/10 (80%), Positives = 8/10 (80%)
Frame = +1 / +2
Query: 619 G*TTTPRGFP 648
G TTTP GFP
Sbjct: 1136 GSTTTPLGFP 1165
>emb|X78433.1|ASLBDG A.sativa L. mRNA for beta-D-glucosidase
Length = 1898
Score = 173 bits (372), Expect(3) = 1e-099
Identities = 66/96 (68%), Positives = 82/96 (85%)
Frame = +3 / +1
Query: 390 DAQIGIEKNVMGRVPYDNMFLDDQAQERSIDYNLGWFMEPVVRGDYPFSMRSLIKDRLPY 569
D QIG+ +VM PY N FLD QAQER+ID+++GWF+EP+VRGDYPFSMRSL+ DRLP+
Sbjct: 904 DGQIGMVLDVMAYEPYGNNFLDQQAQERAIDFHIGWFLEPMVRGDYPFSMRSLVGDRLPF 1083
Query: 570 FTDDEKEKLVGSYDIMGINYYTSRFSKHIDISPKYL 677
FT E+EKLV SYD +GINYYTSRF+KHIDISP+++
Sbjct: 1084 FTKSEQEKLVSSYDFVGINYYTSRFAKHIDISPEFI 1191
Score = 157 bits (338), Expect(3) = 1e-099
Identities = 59/84 (70%), Positives = 66/84 (78%)
Frame = +3 / +1
Query: 3 YKRLINLLKENGIEPYVTLFHWDTPQALVDSYGGFLDDRIVKDYTDFAKVCFVHFGDVVK 182
Y L++ L ENGI+PY+TLFHWDTPQAL D Y FLD RIVKDYTD+A VCF HFGD VK
Sbjct: 517 YNDLLDCLIENGIKPYITLFHWDTPQALADEYKDFLDRRIVKDYTDYATVCFEHFGDKVK 696
Query: 183 NWFTFNEPQTFSSFSYGTGIFAPG 254
NWFTFNEP +F YGTG+ APG
Sbjct: 697 NWFTFNEPHSFCGLGYGTGLHAPG 768
Score = 116 bits (248), Expect(4) = 1e-054
Identities = 52/81 (64%), Positives = 58/81 (71%)
Frame = -3 / -1
Query: 262 EHRPGAKIPVP*EKEENVCGSLKVNQFFTTSPKCTKHTLAKSV*SFTIXXXXXXXXXSTS 83
+ PGA PVP* K +N CGSLKVNQFFT SPKC+KHT+A SV*SFTI S S
Sbjct: 776 QRAPGACSPVP*PKPQNECGSLKVNQFFTLSPKCSKHTVA*SV*SFTILLSKKSLYSSAS 597
Query: 82 A*GVSQWKSVTYGSMPFSFNK 20
A*GVSQWKSV YG +PFS +
Sbjct: 596 A*GVSQWKSVIYGFIPFSIKQ 534
Score = 90.4 bits (191), Expect(3) = 1e-037
Identities = 46/87 (52%), Positives = 56/87 (64%)
Frame = +2 / +3
Query: 2 LQKAHQLVERERHRTICDTFPLGHTSSAGGQLRWLLR*QDCKRLHGLCQGVLCALRRRRE 181
LQ +L++RER++ I FPLGH SS ++ LLR*+DCKRLH L GVL LRR+ E
Sbjct: 516 LQ*PTRLLDRERYKAIYYAFPLGHPSSTSR*VQRLLR*EDCKRLHRLRDGVL*TLRRQGE 695
Query: 182 ELVHLQRATDVLLFFLRNRDLCSGAVL 262
ELVHL RAT +L F L N C L
Sbjct: 696 ELVHL*RATLILWFGLWNGTACPWCAL 776
Score = 90.0 bits (190), Expect(4) = 7e-040
Identities = 43/79 (54%), Positives = 52/79 (65%)
Frame = -2 / -3
Query: 251 RSKDPGSVGKRGERLWLVEGEPVLHDVAEVHKAHLGKVRVIFYNPVI*EATVAVHQRLRC 72
R S+ + + +WLV+GEPVLH VAEV KAH V VIFYNP I*E V + LR
Sbjct: 765 RGMQSRSIAQTTK*VWLVKGEPVLHLVAEVFKAHRRVVCVIFYNPPI*EVFVLIC*CLRG 586
Query: 71 VPVEKCHIWFYAVLFQQVD 15
VPVEK +IW Y VL+Q V+
Sbjct: 585 VPVEKRNIWLYTVLYQAVE 529
Score = 80.3 bits (169), Expect(2) = 3e-025
Identities = 43/69 (62%), Positives = 48/69 (69%)
Frame = +1 / +2
Query: 1 TTKGSSTC*KRTA*NHM*HFSTGTHLKRWWTATVAS*MTGL*KITRTLPRCALCTSATS* 180
TT ST * RT *+H+ FSTGT LK +T S*+ GL*KIT+T RCAL TSAT *
Sbjct: 515 TTMTYSTA**RTV*SHILRFSTGTPLKH*QMSTKTS*IGGL*KITQTTRRCALNTSATR* 694
Query: 181 RTGSPSTSH 207
RTGSP TSH
Sbjct: 695 RTGSPLTSH 721
Score = 68.4 bits (143), Expect(4) = 1e-054
Identities = 31/53 (58%), Positives = 37/53 (69%)
Frame = -3 / -1
Query: 547 NDLMEKG*SPRTTGSMNHPRL*SMDLSWAWSSRNILSYGTRPITFFSIPICAS 389
+DL+EKG*SPRT GS NHP S+ LSWA SR + YG+ IT +IPIC S
Sbjct: 1061 SDLIEKG*SPRTIGSRNHPMWKSIALSWAC*SRKLFPYGS*AITSKTIPICPS 903
Score = 66.6 bits (139), Expect(3) = 1e-099
Identities = 26/44 (59%), Positives = 30/44 (68%)
Frame = +3 / +1
Query: 255 RCSPGQKCANPTGNSLTEPYIVAHNLLRAHAETVHEYNKHYRGN 386
RCS G C P ++L PYIV HNLL AHAETV YNK Y+G+
Sbjct: 772 RCSAGMTCVIPEEDALRNPYIVGHNLLLAHAETVDVYNKFYKGD 903
Score = 58.8 bits (122), Expect(3) = 1e-037
Identities = 37/86 (43%), Positives = 47/86 (54%)
Frame = +2 / +3
Query: 416 RDGPCAI*QYVSRRPGPRKVHRL*PRMVHGAGSSRRLPFLHEIIDQGSATLLHRRREREA 595
RDG AI + + R GPRK + L RMV A S LP L+EI +TLL+ REA
Sbjct: 930 RDGLRAIWKQLPRSTGPRKSN*LPHRMVSRANGSW*LPLLYEITSGRPSTLLY*V*AREA 1109
Query: 596 SGFL*HNGDKLLHLEVFQAHRHLAKV 673
S +* D+LLH V QA+ H +
Sbjct: 1110 SVLI*FRRDQLLHF*VCQAY*HFTGI 1187
Score = 52.8 bits (109), Expect(2) = 3e-025
Identities = 35/78 (44%), Positives = 38/78 (48%)
Frame = +1 / +2
Query: 415 T*WAVCHMTICFSTTRPKKGPSIIT*DGSWSR*FAATTLSP*DH*SRIGYPTSPTTRKRS 594
T*W HM S RPKK T DG S+ F TT S *DH* YP+ + KRS
Sbjct: 929 T*WLTSHMETTSSINRPKKEQLTSTSDGF*SQWFVVTTPSL*DH*WETVYPSLLSLSKRS 1108
Query: 595 *WVLMT*WG*TTTPRGFP 648
* M G TTT G P
Sbjct: 1109 *CPHMIS*GSTTTLLGLP 1162
Score = 47.8 bits (98), Expect(4) = 7e-040
Identities = 22/49 (44%), Positives = 32/49 (65%)
Frame = -2 / -3
Query: 545 *SHGERVVAANYRLHEPS*VIIDGPFLGLVVEKHIVIWHTAHHVFFNPY 399
*SH E VV N+ L +PS V ++ FLGL++E+ + IW +HHV + Y
Sbjct: 1059 *SHREGVVTTNHWL*KPSDVEVNCSFLGLLIEEVVSIWLVSHHVQNHTY 913
Score = 47.3 bits (97), Expect(4) = 1e-054
Identities = 22/39 (56%), Positives = 23/39 (58%)
Frame = -1 / -2
Query: 369 CCTHGQSQRELGGGCGQQCMAR*ASSRLG*RIFVLGSTA 253
CC H QS+ LGGGCGQQCM * LG* L S A
Sbjct: 886 CCKHQQSRHVLGGGCGQQCMDF*GRLPLG*HRSSLPSNA 770
Score = 46.4 bits (95), Expect(4) = 7e-040
Identities = 23/43 (53%), Positives = 26/43 (60%)
Frame = -3 / -1
Query: 382 PL*CLLYSWTVSA*ARRRLWATMYGSVSEFPVGLAHFCPGEHR 254
PL* LL + TVSA ARRRLW TMYG + G+ P E R
Sbjct: 899 PL*NLL*TSTVSACARRRLWPTMYGFLRASSSGMTQVIPAEQR 771
Score = 40.5 bits (82), Expect(3) = 1e-037
Identities = 18/41 (43%), Positives = 24/41 (58%)
Frame = +2 / +3
Query: 254 AVLPRTKMR*PNRELAHRAIHCCPQPPPSSR*DCP*VQQAL 376
A+L R + P ++IHC PQPPPS+ DC +QQ L
Sbjct: 771 ALLGRDDLCHPRGRRPQKSIHCWPQPPPSTCRDC*CLQQVL 893
Score = 32.7 bits (65), Expect(4) = 1e-054
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -3 / -1
Query: 667 GEMSMCLENLEV**FIP 617
GEMS+CL NLEV** IP
Sbjct: 1181 GEMSICLANLEV**LIP 1131
Score = 30.4 bits (60), Expect(4) = 7e-040
Identities = 13/26 (50%), Positives = 17/26 (65%)
Frame = -1 / -2
Query: 663 RCRCAWKTSRCSSLSPLCHKNPLASL 586
+C+ AW+T +CSS S H LASL
Sbjct: 1177 KCQYAWQT*KCSS*SLRNHMRTLASL 1100
>gb|CN821463.1|CN821463 HRO4425_F05_K09ZS5 Lib AA069E1X Avena sativa cv. Ogle-C etiolated
leaf Avena sativa cDNA clone HRO4425_F05_K09, mRNA
sequence
Length = 812
Score = 168 bits (361), Expect(2) = 2e-048
Identities = 65/96 (67%), Positives = 80/96 (83%)
Frame = +3 / +3
Query: 390 DAQIGIEKNVMGRVPYDNMFLDDQAQERSIDYNLGWFMEPVVRGDYPFSMRSLIKDRLPY 569
D QIG+ +VM PY N FLD QAQER+ID+++GWF+EP+VRGDYPFSMRSL+ DRLP+
Sbjct: 72 DGQIGMVLDVMAYEPYGNNFLDQQAQERAIDFHIGWFLEPMVRGDYPFSMRSLVGDRLPF 251
Query: 570 FTDDEKEKLVGSYDIMGINYYTSRFSKHIDISPKYL 677
FT E+EKLV SYD +GINYYTSRF+KH DISP+ +
Sbjct: 252 FTKSEQEKLVSSYDFVGINYYTSRFAKHKDISPEII 359
Score = 67.5 bits (141), Expect(3) = 1e-021
Identities = 31/53 (58%), Positives = 37/53 (69%)
Frame = -3 / -2
Query: 547 NDLMEKG*SPRTTGSMNHPRL*SMDLSWAWSSRNILSYGTRPITFFSIPICAS 389
+DL+EKG*SPRT GS NHP S+ LSWA SR + YG+ IT +IPIC S
Sbjct: 229 SDLIEKG*SPRTIGSRNHPIWKSIALSWAC*SRKLFPYGS*AITSKTIPICPS 71
Score = 39.6 bits (80), Expect(2) = 2e-048
Identities = 15/21 (71%), Positives = 17/21 (80%)
Frame = +3 / +3
Query: 324 HNLLRAHAETVHEYNKHYRGN 386
HNLL AHAETV YNK Y+G+
Sbjct: 9 HNLLLAHAETVDVYNKFYKGD 71
Score = 34.1 bits (68), Expect(3) = 1e-021
Identities = 11/16 (68%), Positives = 12/16 (75%)
Frame = -1 / -3
Query: 369 CCTHGQSQRELGGGCG 322
CC H QS+ LGGGCG
Sbjct: 54 CCKHQQSRHVLGGGCG 7
Score = 33.1 bits (66), Expect(3) = 1e-021
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -3 / -2
Query: 667 GEMSMCLENLEV**FIP 617
GEMS+CL NLEV** IP
Sbjct: 349 GEMSLCLANLEV**LIP 299
>gb|CN821540.1|CN821540 HRO4426_E01_I02ZS5 Lib AA069E1X Avena sativa cv. Ogle-C etiolated
leaf Avena sativa cDNA clone HRO4426_E01_I02, mRNA
sequence
Length = 612
Score = 168 bits (361), Expect(2) = 2e-048
Identities = 65/96 (67%), Positives = 80/96 (83%)
Frame = +3 / +2
Query: 390 DAQIGIEKNVMGRVPYDNMFLDDQAQERSIDYNLGWFMEPVVRGDYPFSMRSLIKDRLPY 569
D QIG+ +VM PY N FLD QAQER+ID+++GWF+EP+VRGDYPFSMRSL+ DRLP+
Sbjct: 71 DGQIGMVLDVMAYEPYGNNFLDQQAQERAIDFHIGWFLEPMVRGDYPFSMRSLVGDRLPF 250
Query: 570 FTDDEKEKLVGSYDIMGINYYTSRFSKHIDISPKYL 677
FT E+EKLV SYD +GINYYTSRF+KH DISP+ +
Sbjct: 251 FTKSEQEKLVSSYDFVGINYYTSRFAKHKDISPEII 358
Score = 39.6 bits (80), Expect(2) = 2e-048
Identities = 15/21 (71%), Positives = 17/21 (80%)
Frame = +3 / +2
Query: 324 HNLLRAHAETVHEYNKHYRGN 386
HNLL AHAETV YNK Y+G+
Sbjct: 8 HNLLLAHAETVDVYNKFYKGD 70
>gb|CN819927.1|CN819927 HRO4407_H12_P23ZS5 Lib AA069E1X Avena sativa cv. Ogle-C etiolated
leaf Avena sativa cDNA clone HRO4407_H12_P23, mRNA
sequence
Length = 832
Score = 168 bits (361), Expect(2) = 2e-047
Identities = 65/96 (67%), Positives = 80/96 (83%)
Frame = +3 / +2
Query: 390 DAQIGIEKNVMGRVPYDNMFLDDQAQERSIDYNLGWFMEPVVRGDYPFSMRSLIKDRLPY 569
D QIG+ +VM PY N FLD QAQER+ID+++GWF+EP+VRGDYPFSMRSL+ DRLP+
Sbjct: 74 DGQIGMVLDVMAYEPYGNNFLDQQAQERAIDFHIGWFLEPMVRGDYPFSMRSLVGDRLPF 253
Query: 570 FTDDEKEKLVGSYDIMGINYYTSRFSKHIDISPKYL 677
FT E+EKLV SYD +GINYYTSRF+KH DISP+ +
Sbjct: 254 FTKSEQEKLVSSYDFVGINYYTSRFAKHKDISPEII 361
Score = 67.5 bits (141), Expect(3) = 9e-021
Identities = 31/53 (58%), Positives = 37/53 (69%)
Frame = -3 / -2
Query: 547 NDLMEKG*SPRTTGSMNHPRL*SMDLSWAWSSRNILSYGTRPITFFSIPICAS 389
+DL+EKG*SPRT GS NHP S+ LSWA SR + YG+ IT +IPIC S
Sbjct: 231 SDLIEKG*SPRTIGSRNHPIWKSIALSWAC*SRKLFPYGS*AITSKTIPICPS 73
Score = 35.9 bits (72), Expect(2) = 2e-047
Identities = 14/20 (70%), Positives = 16/20 (80%)
Frame = +3 / +2
Query: 327 NLLRAHAETVHEYNKHYRGN 386
NLL AHAETV YNK Y+G+
Sbjct: 14 NLLLAHAETVDVYNKFYKGD 73
Score = 33.1 bits (66), Expect(3) = 9e-021
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -3 / -2
Query: 667 GEMSMCLENLEV**FIP 617
GEMS+CL NLEV** IP
Sbjct: 351 GEMSLCLANLEV**LIP 301
Score = 31.3 bits (62), Expect(3) = 9e-021
Identities = 10/15 (66%), Positives = 11/15 (73%)
Frame = -1 / -3
Query: 369 CCTHGQSQRELGGGC 325
CC H QS+ LGGGC
Sbjct: 56 CCKHQQSRHVLGGGC 12
>gb|CN821151.1|CN821151 HRO4428_A10_B20ZS5 Lib AA069E1X Avena sativa cv. Ogle-C etiolated
leaf Avena sativa cDNA clone HRO4428_A10_B20, mRNA
sequence
Length = 826
Score = 146 bits (314), Expect = 3e-036
Identities = 55/76 (72%), Positives = 68/76 (89%)
Frame = +3 / +2
Query: 450 LDDQAQERSIDYNLGWFMEPVVRGDYPFSMRSLIKDRLPYFTDDEKEKLVGSYDIMGINY 629
LD QAQER+ID+++GWF+EP+VRGDYPFSMRSL+ DRLP+FT E+EKLV SYD +GINY
Sbjct: 14 LDQQAQERAIDFHIGWFLEPMVRGDYPFSMRSLVGDRLPFFTKSEQEKLVSSYDFVGINY 193
Query: 630 YTSRFSKHIDISPKYL 677
YTSRF+KH DISP+ +
Sbjct: 194 YTSRFAKHKDISPEII 241
>gb|CN820938.1|CN820938 HRO4421_F11_K21ZS5 Lib AA069E1X Avena sativa cv. Ogle-C etiolated
leaf Avena sativa cDNA clone HRO4421_F11_K21, mRNA
sequence
Length = 808
Score = 144 bits (310), Expect = 1e-035
Identities = 54/75 (72%), Positives = 67/75 (89%)
Frame = +3 / +3
Query: 453 DDQAQERSIDYNLGWFMEPVVRGDYPFSMRSLIKDRLPYFTDDEKEKLVGSYDIMGINYY 632
D QAQER+ID+++GWF+EP+VRGDYPFSMRSL+ DRLP+FT E+EKLV SYD +GINYY
Sbjct: 12 DQQAQERAIDFHIGWFLEPMVRGDYPFSMRSLVGDRLPFFTKSEQEKLVSSYDFVGINYY 191
Query: 633 TSRFSKHIDISPKYL 677
TSRF+KH DISP+ +
Sbjct: 192 TSRFAKHKDISPEII 236
>gb|CN820252.1|CN820252 HRO4417_C06_E11ZS5 Lib AA069E1X Avena sativa cv. Ogle-C etiolated
leaf Avena sativa cDNA clone HRO4417_C06_E11, mRNA
sequence
Length = 544
Score = 138 bits (295), Expect = 1e-033
Identities = 51/71 (71%), Positives = 64/71 (90%)
Frame = +3 / +1
Query: 465 QERSIDYNLGWFMEPVVRGDYPFSMRSLIKDRLPYFTDDEKEKLVGSYDIMGINYYTSRF 644
QER+ID+++GWF+EP+VRGDYPFSMRSL+ DRLP+FT E+EKLV SYD +GINYYTSRF
Sbjct: 1 QERAIDFHIGWFLEPMVRGDYPFSMRSLVGDRLPFFTKSEQEKLVSSYDFVGINYYTSRF 180
Query: 645 SKHIDISPKYL 677
+KH DISP+ +
Sbjct: 181 AKHKDISPEII 213
>gb|CN818764.1|CN818764 HRO4468_D02_G04ZS5 Lib AA070E1X Avena sativa cv. Ogle-C green leaf
Avena sativa cDNA clone HRO4468_D02_G04, mRNA sequence
Length = 718
Score = 109 bits (232), Expect(2) = 2e-031
Identities = 46/116 (39%), Positives = 65/116 (56%)
Frame = +3 / +2
Query: 291 GNSLTEPYIVAHNLLRAHAETVHEYNKHYRGNKDAQIGIEKNVMGRVPYDNMFLDDQAQE 470
GNS EPYI AHN++ AHA Y + Y+ + +GI P N D A +
Sbjct: 128 GNSTVEPYIAAHNMILAHASATRLYREKYQAMQKGVVGINVYSFWTYPLTNSTADLAATK 307
Query: 471 RSIDYNLGWFMEPVVRGDYPFSMRSLIKDRLPYFTDDEKEKLVGSYDIMGINYYTS 638
R D+ GW +EP+V GDYP M++ + RLP FT+ + E + G+ D +GIN+Y S
Sbjct: 308 RYQDFMFGWTLEPLVFGDYPQVMKTNVGSRLPSFTESQSEFVKGAIDFIGINHYYS 475
Score = 40.9 bits (83), Expect(2) = 2e-031
Identities = 17/32 (53%), Positives = 19/32 (59%)
Frame = +3 / +2
Query: 168 GDVVKNWFTFNEPQTFSSFSYGTGIFAPGRCS 263
G V W T +EP SY +GIFAPGRCS
Sbjct: 2 GTRVSYWTTLDEPNIGPIGSYDSGIFAPGRCS 97
>gb|CN819479.1|CN819479 HRO4406_E06_I12ZS5 Lib AA069E1X Avena sativa cv. Ogle-C etiolated
leaf Avena sativa cDNA clone HRO4406_E06_I12, mRNA
sequence
Length = 637
Score = 114 bits (244), Expect = 1e-026
Identities = 43/57 (75%), Positives = 52/57 (91%)
Frame = +3 / +2
Query: 507 PVVRGDYPFSMRSLIKDRLPYFTDDEKEKLVGSYDIMGINYYTSRFSKHIDISPKYL 677
P+VRGDYPFSMRSL+ DRLP+FT E+EKLV SYD +GINYYTSRF+KHIDISP+++
Sbjct: 11 PMVRGDYPFSMRSLVGDRLPFFTKSEQEKLVSSYDFVGINYYTSRFAKHIDISPEFI 181
>gb|CN819567.1|CN819567 HRO4401_F08_K15ZS5 Lib AA069E1X Avena sativa cv. Ogle-C etiolated
leaf Avena sativa cDNA clone HRO4401_F08_K15, mRNA
sequence
Length = 869
Score = 105 bits (225), Expect = 6e-024
Identities = 41/55 (74%), Positives = 48/55 (87%)
Frame = +3 / +2
Query: 513 VRGDYPFSMRSLIKDRLPYFTDDEKEKLVGSYDIMGINYYTSRFSKHIDISPKYL 677
VRGDYPFSMRSL+ DRLP+FT E+EKLV SYD +GINYYTSRF+KH DISP+ +
Sbjct: 11 VRGDYPFSMRSLVGDRLPFFTKSEQEKLVSSYDFVGINYYTSRFAKHKDISPEII 175
Database: Avena_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:15 PM
Number of letters in database: 4,702,463
Number of sequences in database: 8143
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 8,738,974
Number of Sequences: 8143
Number of extensions: 133324
Number of successful extensions: 1546
Number of sequences better than 1.0e-020: 13
length of database: 1,567,487
effective HSP length: 42
effective length of database: 1,225,481
effective search space used: 230390428
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)